Query 019348
Match_columns 342
No_of_seqs 164 out of 1222
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 14:42:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 1.2E-49 4.1E-54 370.3 31.6 321 7-342 4-330 (536)
2 2d1s_A Luciferase, luciferin 4 100.0 8.8E-48 3E-52 358.4 34.0 326 1-342 1-342 (548)
3 3rix_A Luciferase, luciferin 4 100.0 3.6E-47 1.2E-51 354.7 31.7 323 8-342 4-340 (550)
4 3r44_A Fatty acyl COA syntheta 100.0 3.6E-47 1.2E-51 352.0 24.8 300 27-342 16-315 (517)
5 1t5h_X 4-chlorobenzoyl COA lig 100.0 1.6E-46 5.5E-51 346.9 27.4 293 27-342 2-304 (504)
6 1mdb_A 2,3-dihydroxybenzoate-A 100.0 1.1E-46 3.7E-51 350.6 26.3 295 27-342 25-330 (539)
7 3tsy_A Fusion protein 4-coumar 100.0 2.6E-46 8.8E-51 370.3 30.6 325 10-342 46-377 (979)
8 3g7s_A Long-chain-fatty-acid-- 100.0 3.1E-46 1.1E-50 348.4 28.7 308 14-342 9-335 (549)
9 3o83_A Peptide arylation enzym 100.0 2.1E-46 7.1E-51 349.0 27.1 299 27-342 30-339 (544)
10 1v25_A Long-chain-fatty-acid-C 100.0 3.8E-46 1.3E-50 347.0 28.0 299 27-342 18-324 (541)
11 3fce_A D-alanine--poly(phospho 100.0 3.8E-46 1.3E-50 345.1 27.2 291 27-342 1-294 (512)
12 3t5a_A Long-chain-fatty-acid-- 100.0 4.6E-46 1.6E-50 342.2 21.8 297 27-342 24-349 (480)
13 3e7w_A D-alanine--poly(phospho 100.0 4E-45 1.4E-49 338.1 27.8 289 27-342 1-293 (511)
14 3etc_A AMP-binding protein; ad 100.0 8E-45 2.7E-49 340.2 30.1 302 27-342 55-373 (580)
15 3rg2_A Enterobactin synthase c 100.0 5.8E-45 2E-49 344.0 29.2 301 19-342 21-334 (617)
16 4dg8_A PA1221; ANL superfamily 100.0 2.6E-45 9E-50 345.4 26.3 281 27-342 27-309 (620)
17 2v7b_A Benzoate-coenzyme A lig 100.0 1.5E-44 5.3E-49 335.7 30.6 299 28-342 25-332 (529)
18 4gr5_A Non-ribosomal peptide s 100.0 6.9E-45 2.4E-49 340.6 27.8 283 27-342 75-359 (570)
19 1pg4_A Acetyl-COA synthetase; 100.0 8.8E-45 3E-49 344.4 28.5 308 28-342 77-413 (652)
20 3l8c_A D-alanine--poly(phospho 100.0 1.1E-44 3.9E-49 336.0 27.7 291 27-342 4-297 (521)
21 3ivr_A Putative long-chain-fat 100.0 1.4E-44 4.8E-49 334.4 27.9 293 26-342 5-302 (509)
22 1ry2_A Acetyl-coenzyme A synth 100.0 2.1E-44 7.2E-49 342.0 29.2 309 28-342 83-419 (663)
23 3c5e_A Acyl-coenzyme A synthet 100.0 6.2E-44 2.1E-48 333.7 30.9 299 28-342 39-354 (570)
24 4fuq_A Malonyl COA synthetase; 100.0 1.7E-44 5.9E-49 333.0 26.3 292 31-342 4-300 (503)
25 3ipl_A 2-succinylbenzoate--COA 100.0 3.3E-44 1.1E-48 331.4 24.1 300 27-342 1-305 (501)
26 1amu_A GRSA, gramicidin synthe 100.0 1.5E-43 5.1E-48 330.7 26.6 286 19-342 33-323 (563)
27 3kxw_A Saframycin MX1 syntheta 100.0 2.5E-44 8.7E-49 338.7 21.3 299 27-342 11-327 (590)
28 3gqw_A Fatty acid AMP ligase; 100.0 1.6E-42 5.3E-47 325.7 25.6 300 19-342 15-337 (576)
29 3ite_A SIDN siderophore synthe 100.0 3.1E-42 1E-46 322.5 25.3 292 27-342 20-326 (562)
30 2vsq_A Surfactin synthetase su 100.0 8.8E-42 3E-46 345.9 27.4 285 27-342 464-753 (1304)
31 3nyq_A Malonyl-COA ligase; A/B 100.0 2.6E-42 8.9E-47 318.5 15.7 279 27-342 22-304 (505)
32 4gs5_A Acyl-COA synthetase (AM 99.9 3.8E-25 1.3E-29 194.7 7.2 144 191-342 36-179 (358)
33 3hgu_A EHPF; phenazine, antibi 99.9 4.7E-23 1.6E-27 182.6 9.6 152 189-342 88-265 (369)
34 3qov_A Phenylacetate-coenzyme 99.9 1.4E-22 4.7E-27 183.6 11.0 154 188-342 81-238 (436)
35 2y27_A Phenylacetate-coenzyme 99.9 5.3E-22 1.8E-26 179.8 11.6 153 188-342 86-242 (437)
36 2y4o_A Phenylacetate-coenzyme 99.9 9.4E-22 3.2E-26 178.5 11.5 153 188-342 88-244 (443)
37 2y27_A Phenylacetate-coenzyme 94.5 0.25 8.7E-06 43.9 10.5 87 53-140 108-196 (437)
38 2y4o_A Phenylacetate-coenzyme 93.9 0.36 1.2E-05 42.9 10.2 87 53-140 110-198 (443)
39 3qov_A Phenylacetate-coenzyme 93.5 0.42 1.4E-05 42.4 9.9 98 42-140 86-192 (436)
40 3hgu_A EHPF; phenazine, antibi 88.4 1.6 5.6E-05 37.5 8.2 86 53-140 109-219 (369)
41 2d1s_A Luciferase, luciferin 4 88.1 3.1 0.00011 38.1 10.2 98 42-141 192-298 (548)
42 1mdb_A 2,3-dihydroxybenzoate-A 86.9 7.6 0.00026 35.3 12.1 97 40-140 180-286 (539)
43 3o83_A Peptide arylation enzym 86.5 8.1 0.00028 35.2 12.0 96 40-139 189-294 (544)
44 3r44_A Fatty acyl COA syntheta 84.5 9.6 0.00033 34.5 11.4 96 40-140 168-272 (517)
45 3ipl_A 2-succinylbenzoate--COA 83.5 11 0.00036 33.9 11.2 99 40-142 161-267 (501)
46 3ezx_A MMCP 1, monomethylamine 82.3 16 0.00054 28.7 10.4 92 236-329 94-195 (215)
47 3fce_A D-alanine--poly(phospho 81.4 6.9 0.00024 35.3 9.2 98 40-140 142-249 (512)
48 3rix_A Luciferase, luciferin 4 81.1 8.1 0.00028 35.2 9.6 99 41-140 189-295 (550)
49 3e7w_A D-alanine--poly(phospho 80.0 9.2 0.00032 34.5 9.5 98 40-140 141-248 (511)
50 3kxw_A Saframycin MX1 syntheta 79.3 9.4 0.00032 35.1 9.5 96 40-138 165-272 (590)
51 3rg2_A Enterobactin synthase c 79.1 26 0.00087 32.5 12.4 96 40-139 182-287 (617)
52 1t5h_X 4-chlorobenzoyl COA lig 78.6 10 0.00035 34.1 9.3 97 40-140 151-258 (504)
53 3c5e_A Acyl-coenzyme A synthet 77.6 18 0.00063 33.1 10.8 100 40-142 204-313 (570)
54 4gs5_A Acyl-COA synthetase (AM 77.0 16 0.00055 31.1 9.7 94 41-140 36-137 (358)
55 1v25_A Long-chain-fatty-acid-C 76.0 14 0.00048 33.6 9.5 100 40-140 174-281 (541)
56 3ivr_A Putative long-chain-fat 76.0 28 0.00097 31.1 11.5 97 40-140 158-262 (509)
57 3g7s_A Long-chain-fatty-acid-- 75.0 14 0.00048 33.6 9.3 95 42-140 180-282 (549)
58 3t5a_A Long-chain-fatty-acid-- 74.8 14 0.00047 32.8 9.0 107 189-299 36-148 (480)
59 2v7b_A Benzoate-coenzyme A lig 72.1 13 0.00043 33.7 8.1 98 40-140 181-288 (529)
60 3ni2_A 4-coumarate:COA ligase; 71.5 22 0.00076 32.2 9.6 99 189-296 34-134 (536)
61 3nyq_A Malonyl-COA ligase; A/B 70.7 37 0.0013 30.4 10.9 96 40-140 153-257 (505)
62 1ry2_A Acetyl-coenzyme A synth 68.5 40 0.0014 31.5 10.9 98 190-292 95-195 (663)
63 3tbh_A O-acetyl serine sulfhyd 67.6 22 0.00075 30.1 8.1 92 42-135 35-127 (334)
64 1amu_A GRSA, gramicidin synthe 67.1 20 0.00069 32.8 8.4 98 40-140 180-287 (563)
65 4gr5_A Non-ribosomal peptide s 65.2 29 0.00098 31.7 9.0 97 40-140 212-317 (570)
66 4dg8_A PA1221; ANL superfamily 63.0 33 0.0011 31.8 9.1 97 40-140 162-267 (620)
67 3l8c_A D-alanine--poly(phospho 61.3 65 0.0022 28.8 10.6 99 40-139 143-251 (521)
68 3gqw_A Fatty acid AMP ligase; 60.8 30 0.001 31.5 8.4 97 40-138 174-282 (576)
69 3vc3_A Beta-cyanoalnine syntha 60.4 26 0.0009 29.7 7.3 92 43-135 51-142 (344)
70 1pg4_A Acetyl-COA synthetase; 60.3 40 0.0014 31.4 9.2 98 41-140 255-364 (652)
71 4b2g_A GH3-1 auxin conjugating 57.9 1.3 4.5E-05 40.9 -1.3 31 189-219 96-127 (609)
72 4epl_A Jasmonic acid-amido syn 57.1 1.8 6.1E-05 39.8 -0.6 32 188-219 94-126 (581)
73 3ju7_A Putative PLP-dependent 55.2 28 0.00096 29.8 6.8 61 69-132 68-135 (377)
74 3tsy_A Fusion protein 4-coumar 54.4 49 0.0017 32.6 9.1 101 39-140 222-332 (979)
75 4fuq_A Malonyl COA synthetase; 52.9 53 0.0018 29.4 8.4 81 211-293 28-110 (503)
76 4eql_A 4-substituted benzoates 52.3 2.4 8.4E-05 39.0 -0.6 31 189-219 90-121 (581)
77 3etc_A AMP-binding protein; ad 48.4 57 0.002 29.8 8.0 99 40-141 223-331 (580)
78 3ite_A SIDN siderophore synthe 48.0 61 0.0021 29.4 8.2 87 53-139 193-285 (562)
79 1zsy_A Mitochondrial 2-enoyl t 45.6 94 0.0032 26.2 8.5 79 54-133 139-223 (357)
80 3tqh_A Quinone oxidoreductase; 45.3 60 0.0021 26.9 7.1 77 53-133 124-203 (321)
81 4aec_A Cysteine synthase, mito 44.7 87 0.003 27.5 8.1 63 72-134 166-229 (430)
82 1y80_A Predicted cobalamin bin 44.5 72 0.0025 24.6 7.0 57 79-135 88-148 (210)
83 1z7w_A Cysteine synthase; tran 44.2 96 0.0033 25.8 8.2 92 42-135 30-122 (322)
84 1eg5_A Aminotransferase; PLP-d 43.4 1E+02 0.0036 25.7 8.6 56 77-133 87-146 (384)
85 1o69_A Aminotransferase; struc 42.9 1.1E+02 0.0039 25.9 8.8 60 72-134 65-130 (394)
86 4h1h_A LMO1638 protein; MCCF-l 41.7 72 0.0025 26.8 7.0 60 75-134 8-86 (327)
87 4eez_A Alcohol dehydrogenase 1 41.5 90 0.0031 26.1 7.7 77 53-132 135-214 (348)
88 3ri6_A O-acetylhomoserine sulf 41.1 1.2E+02 0.004 26.6 8.6 55 76-133 118-174 (430)
89 3hs3_A Ribose operon repressor 40.0 1.4E+02 0.0048 23.7 9.0 83 68-153 2-94 (277)
90 2q3b_A Cysteine synthase A; py 39.9 1.4E+02 0.0046 24.7 8.4 90 43-135 32-122 (313)
91 3dzz_A Putative pyridoxal 5'-p 39.8 1.1E+02 0.0036 25.9 8.1 55 76-133 106-167 (391)
92 2vsq_A Surfactin synthetase su 38.5 88 0.003 32.0 8.2 97 40-140 605-711 (1304)
93 2jtq_A Phage shock protein E; 37.7 68 0.0023 20.2 5.0 45 53-104 22-66 (85)
94 2jwk_A Protein TOLR; periplasm 37.3 55 0.0019 20.0 4.4 37 28-66 31-67 (74)
95 2pqm_A Cysteine synthase; OASS 36.8 1.5E+02 0.005 25.0 8.2 91 42-135 42-133 (343)
96 3b8x_A WBDK, pyridoxamine 5-ph 36.7 1.5E+02 0.0052 25.0 8.6 55 75-133 76-135 (390)
97 3sr3_A Microcin immunity prote 36.0 1E+02 0.0035 26.0 7.0 60 75-134 9-87 (336)
98 2e7j_A SEP-tRNA:Cys-tRNA synth 35.6 1.8E+02 0.0062 24.1 8.8 55 76-133 90-154 (371)
99 1mdo_A ARNB aminotransferase; 34.9 1.2E+02 0.004 25.6 7.6 58 72-133 72-134 (393)
100 2egu_A Cysteine synthase; O-ac 34.8 1.5E+02 0.005 24.4 7.8 91 42-135 29-120 (308)
101 3dwg_A Cysteine synthase B; su 34.7 1.6E+02 0.0053 24.6 8.0 89 43-134 38-127 (325)
102 3two_A Mannitol dehydrogenase; 34.7 1.3E+02 0.0044 25.2 7.6 75 53-131 148-225 (348)
103 3tla_A MCCF; serine protease, 34.7 1E+02 0.0036 26.4 6.9 61 74-134 38-117 (371)
104 3a2b_A Serine palmitoyltransfe 34.4 2.1E+02 0.0072 24.1 9.4 55 76-134 124-181 (398)
105 3qwb_A Probable quinone oxidor 34.3 2E+02 0.0068 23.8 9.1 57 74-133 144-200 (334)
106 3ijw_A Aminoglycoside N3-acety 34.1 31 0.0011 28.1 3.3 25 65-89 18-42 (268)
107 2c81_A Glutamine-2-deoxy-scyll 33.1 1.1E+02 0.0039 26.1 7.2 58 72-133 75-137 (418)
108 3l6b_A Serine racemase; pyrido 32.7 77 0.0026 26.8 5.8 91 43-136 41-132 (346)
109 4e5s_A MCCFLIKE protein (BA_56 32.2 1.3E+02 0.0044 25.3 7.0 60 75-134 8-86 (331)
110 3r31_A BADH, betaine aldehyde 32.1 1.3E+02 0.0044 27.2 7.4 77 236-320 152-238 (517)
111 2nyg_A YOKD protein; PFAM02522 31.7 35 0.0012 27.9 3.3 24 66-89 17-40 (273)
112 4e4g_A Methylmalonate-semialde 31.7 1E+02 0.0035 27.9 6.7 87 236-330 164-261 (521)
113 2q5c_A NTRC family transcripti 31.6 1.3E+02 0.0043 23.0 6.4 74 79-152 94-168 (196)
114 3sma_A FRBF; N-acetyl transfer 31.5 36 0.0012 28.0 3.3 32 51-89 18-49 (286)
115 3kki_A CAI-1 autoinducer synth 31.4 1.1E+02 0.0038 26.1 6.8 55 76-134 140-194 (409)
116 2z61_A Probable aspartate amin 31.3 1.9E+02 0.0064 24.1 8.2 51 77-133 111-161 (370)
117 1t3i_A Probable cysteine desul 31.2 1.6E+02 0.0055 25.0 7.9 57 76-133 115-176 (420)
118 1t90_A MMSDH, probable methylm 31.2 1E+02 0.0035 27.5 6.6 78 235-320 142-229 (486)
119 3pdi_A Nitrogenase MOFE cofact 31.2 2.8E+02 0.0097 24.6 10.2 33 78-111 331-363 (483)
120 3s2e_A Zinc-containing alcohol 31.1 1.6E+02 0.0056 24.4 7.7 77 53-133 138-217 (340)
121 1h2b_A Alcohol dehydrogenase; 31.0 1.4E+02 0.0049 25.1 7.3 78 53-133 153-238 (359)
122 1gu7_A Enoyl-[acyl-carrier-pro 31.0 1.1E+02 0.0036 25.9 6.5 79 54-133 138-223 (364)
123 1elu_A L-cysteine/L-cystine C- 30.9 1.5E+02 0.0051 24.9 7.5 57 76-133 98-161 (390)
124 3r7f_A Aspartate carbamoyltran 30.8 1.9E+02 0.0066 23.9 7.6 79 54-133 9-99 (304)
125 4ej6_A Putative zinc-binding d 30.8 1.5E+02 0.0052 25.1 7.5 59 70-132 174-233 (370)
126 3ist_A Glutamate racemase; str 30.7 93 0.0032 25.3 5.7 59 27-92 18-80 (269)
127 3frk_A QDTB; aminotransferase, 30.5 89 0.003 26.3 6.0 61 69-133 66-131 (373)
128 2pfu_A Biopolymer transport EX 30.3 1E+02 0.0035 20.1 5.1 33 28-62 43-75 (99)
129 1y7l_A O-acetylserine sulfhydr 30.1 2.2E+02 0.0075 23.4 8.2 91 42-135 26-117 (316)
130 1rjw_A ADH-HT, alcohol dehydro 30.0 2.2E+02 0.0075 23.6 8.3 75 53-131 136-213 (339)
131 3krt_A Crotonyl COA reductase; 29.8 1.5E+02 0.0052 26.0 7.5 77 53-132 197-279 (456)
132 3ohp_A Hypoxanthine phosphorib 29.3 1.5E+02 0.0051 22.2 6.3 51 53-104 7-57 (177)
133 4dq6_A Putative pyridoxal phos 29.0 2E+02 0.007 24.0 8.1 53 76-133 111-171 (391)
134 3b4w_A Aldehyde dehydrogenase; 28.7 1.4E+02 0.0048 26.7 7.0 79 234-320 146-234 (495)
135 2i2x_B MTAC, methyltransferase 28.7 1.7E+02 0.0057 23.5 6.9 87 236-326 124-219 (258)
136 4hvk_A Probable cysteine desul 28.6 1E+02 0.0035 25.7 6.0 56 77-133 86-145 (382)
137 2i2x_B MTAC, methyltransferase 28.4 2.3E+02 0.0078 22.7 7.9 82 53-134 91-182 (258)
138 1uxt_A Glyceraldehyde-3-phosph 28.3 1.4E+02 0.0048 26.8 7.0 77 235-319 158-244 (501)
139 1c7n_A Cystalysin; transferase 28.2 1.8E+02 0.0062 24.5 7.6 53 77-132 111-170 (399)
140 1mio_B Nitrogenase molybdenum 28.1 2.3E+02 0.0078 25.0 8.2 47 78-125 311-361 (458)
141 3acd_A Hypoxanthine-guanine ph 28.0 1.1E+02 0.0036 23.2 5.2 44 53-97 12-55 (181)
142 2o2p_A Formyltetrahydrofolate 28.0 1.5E+02 0.005 26.8 7.1 78 235-320 179-267 (517)
143 3eod_A Protein HNR; response r 28.0 1.4E+02 0.0047 20.0 6.1 54 79-135 7-60 (130)
144 4b7c_A Probable oxidoreductase 27.9 2E+02 0.0068 23.8 7.6 59 72-132 143-201 (336)
145 3ndn_A O-succinylhomoserine su 27.8 2.4E+02 0.008 24.4 8.3 56 76-133 117-173 (414)
146 4eb5_A Probable cysteine desul 27.6 1E+02 0.0034 25.9 5.8 56 77-133 86-145 (382)
147 3etf_A Putative succinate-semi 27.6 1.3E+02 0.0043 26.7 6.5 88 236-331 128-226 (462)
148 3uhf_A Glutamate racemase; str 27.6 1.4E+02 0.0049 24.2 6.3 57 28-91 38-98 (274)
149 3fpc_A NADP-dependent alcohol 27.5 1.4E+02 0.0047 25.1 6.6 76 53-132 138-217 (352)
150 1ofu_X SULA, hypothetical prot 27.5 1.6E+02 0.0053 20.5 6.3 51 68-118 47-99 (119)
151 1b9h_A AHBA synthase, protein 27.4 2.1E+02 0.007 24.1 7.8 56 72-131 71-131 (388)
152 2fsx_A RV0390, COG0607: rhodan 27.2 66 0.0023 23.1 3.9 40 65-104 66-105 (148)
153 1oft_A SULA, hypothetical prot 27.0 1.9E+02 0.0066 21.3 6.6 16 118-133 117-132 (161)
154 3r64_A NAD dependent benzaldeh 27.0 1.8E+02 0.0061 26.2 7.4 77 235-319 149-237 (508)
155 2ayi_A Aminopeptidase T; metal 26.9 1.2E+02 0.0042 26.3 6.1 50 60-109 4-57 (408)
156 2duw_A Putative COA-binding pr 26.9 1.5E+02 0.005 21.3 5.7 49 80-129 72-120 (145)
157 3ju8_A Succinylglutamic semial 26.7 1.2E+02 0.0042 27.1 6.3 76 236-319 141-226 (490)
158 3isl_A Purine catabolism prote 26.7 1.8E+02 0.006 24.7 7.3 57 76-133 83-143 (416)
159 3kax_A Aminotransferase, class 26.6 2.6E+02 0.0087 23.3 8.2 54 76-133 103-163 (383)
160 3jv7_A ADH-A; dehydrogenase, n 26.3 1.3E+02 0.0046 25.0 6.3 77 55-134 143-224 (345)
161 2cb1_A O-acetyl homoserine sul 26.3 1.8E+02 0.0063 24.9 7.3 55 76-133 92-147 (412)
162 2oga_A Transaminase; PLP-depen 26.3 2.4E+02 0.0082 23.9 8.0 58 72-133 96-158 (399)
163 1kmj_A Selenocysteine lyase; p 26.1 1.7E+02 0.006 24.6 7.1 57 76-133 110-171 (406)
164 1gr0_A Inositol-3-phosphate sy 25.9 3E+02 0.01 23.5 8.0 59 67-128 130-192 (367)
165 3u7q_B Nitrogenase molybdenum- 25.9 2.9E+02 0.0098 25.0 8.5 31 78-109 363-393 (523)
166 1urh_A 3-mercaptopyruvate sulf 25.9 1.3E+02 0.0045 24.2 6.0 40 65-104 72-112 (280)
167 3nyt_A Aminotransferase WBPE; 25.8 96 0.0033 26.0 5.3 60 69-132 65-129 (367)
168 3zrp_A Serine-pyruvate aminotr 25.7 2.6E+02 0.009 23.1 8.2 57 76-133 74-134 (384)
169 1e5e_A MGL, methionine gamma-l 25.7 2.4E+02 0.0082 24.1 7.9 55 77-133 99-154 (404)
170 1d2f_A MALY protein; aminotran 25.2 2.3E+02 0.0079 23.8 7.7 53 77-132 109-168 (390)
171 3k2w_A Betaine-aldehyde dehydr 25.2 1.5E+02 0.0052 26.5 6.6 78 234-319 148-236 (497)
172 3i16_A Aluminum resistance pro 24.9 2E+02 0.0069 25.1 7.2 59 76-134 112-184 (427)
173 3iwj_A Putative aminoaldehyde 24.9 1.5E+02 0.0051 26.6 6.5 78 235-320 152-240 (503)
174 4a0s_A Octenoyl-COA reductase/ 24.9 1.8E+02 0.0061 25.4 7.0 77 53-132 189-271 (447)
175 1e0c_A Rhodanese, sulfurtransf 24.8 1.4E+02 0.0047 23.9 5.8 39 66-104 68-107 (271)
176 3f9t_A TDC, L-tyrosine decarbo 24.8 3E+02 0.01 22.8 9.5 54 77-133 121-178 (397)
177 3uko_A Alcohol dehydrogenase c 24.7 2.3E+02 0.0079 24.0 7.5 76 53-132 164-244 (378)
178 3cq5_A Histidinol-phosphate am 24.6 2.8E+02 0.0096 23.0 8.1 54 77-133 114-171 (369)
179 3bul_A Methionine synthase; tr 24.6 3.6E+02 0.012 24.8 8.8 78 245-326 110-194 (579)
180 3euc_A Histidinol-phosphate am 24.6 1.8E+02 0.0062 24.2 6.8 55 76-133 106-164 (367)
181 3cai_A Possible aminotransfera 24.5 1.8E+02 0.0063 24.5 7.0 57 76-133 110-172 (406)
182 1uzb_A 1-pyrroline-5-carboxyla 24.4 1.3E+02 0.0045 27.1 6.1 76 236-319 175-261 (516)
183 3kgw_A Alanine-glyoxylate amin 24.3 2.3E+02 0.0078 23.7 7.5 20 114-133 136-155 (393)
184 3lvm_A Cysteine desulfurase; s 24.3 3.3E+02 0.011 23.1 10.0 56 77-133 111-170 (423)
185 2z9v_A Aspartate aminotransfer 24.3 1.9E+02 0.0064 24.3 6.9 56 77-133 81-141 (392)
186 3nvb_A Uncharacterized protein 24.1 2.6E+02 0.0089 24.1 7.5 77 58-138 255-340 (387)
187 1o04_A Aldehyde dehydrogenase, 23.9 1.7E+02 0.0057 26.3 6.6 77 235-319 159-246 (500)
188 3i44_A Aldehyde dehydrogenase; 23.9 1.5E+02 0.005 26.6 6.2 78 235-320 162-250 (497)
189 3prl_A NADP-dependent glyceral 23.8 1.4E+02 0.0049 26.8 6.1 76 236-319 154-240 (505)
190 3vax_A Putative uncharacterize 23.8 1.5E+02 0.005 25.1 6.2 56 77-133 106-166 (400)
191 3ezx_A MMCP 1, monomethylamine 23.8 2.5E+02 0.0087 21.7 9.3 80 53-132 57-149 (215)
192 1e0c_A Rhodanese, sulfurtransf 23.7 1.4E+02 0.0047 23.9 5.7 39 66-104 210-248 (271)
193 3t18_A Aminotransferase class 23.6 3.3E+02 0.011 23.0 8.9 55 76-133 122-185 (413)
194 3u4j_A NAD-dependent aldehyde 23.5 1.6E+02 0.0055 26.6 6.4 88 235-330 162-261 (528)
195 3a2k_A TRNA(Ile)-lysidine synt 23.5 3E+02 0.01 24.3 8.2 69 66-134 4-86 (464)
196 3hvy_A Cystathionine beta-lyas 23.2 2.5E+02 0.0086 24.4 7.5 59 76-134 113-184 (427)
197 3mfq_A TROA, high-affinity zin 23.2 1.1E+02 0.0039 24.9 5.0 79 57-137 138-223 (282)
198 1zd0_A Hypothetical protein PF 23.1 99 0.0034 22.6 4.0 58 65-125 86-144 (150)
199 2e18_A NH(3)-dependent NAD(+) 23.1 1.9E+02 0.0066 23.0 6.3 68 63-133 9-82 (257)
200 3uog_A Alcohol dehydrogenase; 23.1 2.9E+02 0.0098 23.2 7.8 76 53-132 160-239 (363)
201 3bul_A Methionine synthase; tr 23.0 4.1E+02 0.014 24.4 8.9 83 53-135 63-158 (579)
202 2ch1_A 3-hydroxykynurenine tra 22.9 2.3E+02 0.0079 23.7 7.3 55 77-132 91-149 (396)
203 1euh_A NADP dependent non phos 22.9 1.9E+02 0.0064 25.7 6.7 86 235-331 144-240 (475)
204 1yqd_A Sinapyl alcohol dehydro 22.9 2.6E+02 0.0088 23.6 7.4 62 69-133 177-239 (366)
205 3jvd_A Transcriptional regulat 22.8 2.9E+02 0.0099 22.6 7.7 84 65-153 53-145 (333)
206 1o58_A O-acetylserine sulfhydr 22.7 3.1E+02 0.011 22.3 7.7 88 43-135 32-120 (303)
207 2ywu_A Hypoxanthine-guanine ph 22.6 1.5E+02 0.0052 22.2 5.2 22 53-74 12-33 (181)
208 2jfz_A Glutamate racemase; cel 22.5 1.9E+02 0.0066 23.0 6.2 55 27-87 13-71 (255)
209 3uwc_A Nucleotide-sugar aminot 22.5 1.3E+02 0.0046 25.1 5.6 57 71-131 70-130 (374)
210 2cf5_A Atccad5, CAD, cinnamyl 22.5 2E+02 0.007 24.1 6.7 79 53-134 151-233 (357)
211 2v03_A Cysteine synthase B; py 22.4 3.2E+02 0.011 22.3 8.3 90 42-134 25-115 (303)
212 3olh_A MST, 3-mercaptopyruvate 22.3 1.3E+02 0.0044 24.7 5.3 41 65-105 240-280 (302)
213 3nnk_A Ureidoglycine-glyoxylat 22.2 2.5E+02 0.0084 23.7 7.3 57 76-133 85-145 (411)
214 3o7m_A Hypoxanthine phosphorib 22.1 2.3E+02 0.0077 21.4 6.1 22 53-74 11-32 (186)
215 1a4s_A ALDH, betaine aldehyde 22.0 1.8E+02 0.0063 26.0 6.5 78 234-319 155-242 (503)
216 3ia7_A CALG4; glycosysltransfe 22.0 1.4E+02 0.0049 25.1 5.8 68 56-133 14-109 (402)
217 1pl8_A Human sorbitol dehydrog 21.9 2.6E+02 0.0089 23.4 7.3 75 53-132 144-222 (356)
218 2fnu_A Aminotransferase; prote 21.9 1.8E+02 0.0061 24.2 6.3 52 76-131 71-126 (375)
219 3ed6_A Betaine aldehyde dehydr 21.8 1.5E+02 0.0052 26.7 5.9 78 235-320 171-259 (520)
220 1wnd_A Putative betaine aldehy 21.7 1.5E+02 0.005 26.6 5.8 79 234-320 159-247 (495)
221 4h27_A L-serine dehydratase/L- 21.7 1.5E+02 0.0053 25.1 5.7 88 43-136 62-149 (364)
222 3ecd_A Serine hydroxymethyltra 21.7 2.6E+02 0.0089 23.7 7.4 58 76-133 115-179 (425)
223 1zjc_A Aminopeptidase AMPS; me 21.7 1.4E+02 0.0048 26.1 5.5 50 60-109 7-60 (418)
224 1dqn_A Guanine phosphoribosylt 21.6 1.4E+02 0.0048 23.6 5.0 47 52-98 33-80 (230)
225 2wme_A BADH, betaine aldehyde 21.6 1.8E+02 0.0063 25.9 6.4 79 235-321 143-232 (490)
226 1ve1_A O-acetylserine sulfhydr 21.5 3.3E+02 0.011 22.2 8.5 91 42-135 24-117 (304)
227 4dup_A Quinone oxidoreductase; 21.5 3.1E+02 0.011 22.8 7.7 77 53-132 138-218 (353)
228 3op7_A Aminotransferase class 21.5 2E+02 0.007 23.9 6.6 54 76-133 102-161 (375)
229 2bkw_A Alanine-glyoxylate amin 21.4 3.5E+02 0.012 22.4 8.4 56 77-133 84-144 (385)
230 3n75_A LDC, lysine decarboxyla 21.3 2.3E+02 0.0078 26.8 7.2 56 76-134 232-306 (715)
231 1bxs_A Aldehyde dehydrogenase; 21.3 2E+02 0.0069 25.7 6.6 77 235-319 160-247 (501)
232 3jzl_A Putative cystathionine 21.3 2.3E+02 0.0078 24.5 6.8 58 76-134 98-167 (409)
233 1urh_A 3-mercaptopyruvate sulf 21.2 1.6E+02 0.0055 23.7 5.6 51 54-104 200-255 (280)
234 2gzm_A Glutamate racemase; enz 21.1 2E+02 0.007 23.0 6.1 58 27-91 16-77 (267)
235 2ctz_A O-acetyl-L-homoserine s 21.0 3.3E+02 0.011 23.4 7.9 56 76-133 94-151 (421)
236 3kke_A LACI family transcripti 20.8 2.4E+02 0.0081 22.7 6.7 8 42-49 16-23 (303)
237 3kcq_A Phosphoribosylglycinami 20.8 2.5E+02 0.0084 21.9 6.2 54 79-134 36-90 (215)
238 3ros_A NAD-dependent aldehyde 20.8 2.1E+02 0.0071 25.5 6.6 90 234-331 123-223 (484)
239 3rsc_A CALG2; TDP, enediyne, s 20.8 2.1E+02 0.0073 24.2 6.7 68 56-133 30-125 (415)
240 3goh_A Alcohol dehydrogenase, 20.8 2.4E+02 0.0082 23.0 6.7 74 53-131 114-190 (315)
241 2cvh_A DNA repair and recombin 20.7 2.6E+02 0.0088 21.0 6.5 51 74-125 15-69 (220)
242 3bb8_A CDP-4-keto-6-deoxy-D-gl 20.7 2.5E+02 0.0084 24.2 7.0 53 76-132 107-164 (437)
243 3u7q_A Nitrogenase molybdenum- 20.5 3.4E+02 0.012 24.2 7.9 33 78-111 347-379 (492)
244 2imp_A Lactaldehyde dehydrogen 20.5 2.2E+02 0.0074 25.3 6.6 77 235-319 143-230 (479)
245 1j32_A Aspartate aminotransfer 20.5 3.7E+02 0.013 22.4 8.6 52 77-132 112-169 (388)
246 2yxb_A Coenzyme B12-dependent 20.4 2.5E+02 0.0087 20.4 7.6 36 99-134 42-77 (161)
247 2rfv_A Methionine gamma-lyase; 20.3 3.6E+02 0.012 22.8 7.9 55 77-133 101-156 (398)
248 4a2c_A Galactitol-1-phosphate 20.2 2.4E+02 0.0084 23.3 6.7 62 68-133 150-212 (346)
249 2l66_A SSO7C4, transcriptional 20.2 1.2E+02 0.004 17.4 3.2 19 71-89 21-39 (53)
250 3out_A Glutamate racemase; str 20.1 2.5E+02 0.0084 22.7 6.3 59 27-92 20-82 (268)
251 1rhs_A Sulfur-substituted rhod 20.1 1.8E+02 0.006 23.7 5.6 41 65-105 226-266 (296)
252 1toa_A Tromp-1, protein (perip 20.1 1.5E+02 0.0053 24.6 5.2 78 58-137 173-257 (313)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=1.2e-49 Score=370.34 Aligned_cols=321 Identities=35% Similarity=0.595 Sum_probs=273.9
Q ss_pred CCCceeecCCCCCCCCCCCCCCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEC
Q 019348 7 GRDGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFA 86 (342)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~ 86 (342)
.+..++.+..++.+.|.. .++.++|.++++++||++|+++.++++++||+||.++++++|+.|++.|+++||+|++++
T Consensus 4 ~~~~i~~~~~~~~~~p~~--~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~ 81 (536)
T 3ni2_A 4 QEEFIFRSKLPDIYIPKN--LPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFL 81 (536)
T ss_dssp -CCCCBCCSSCCCCCCSS--CCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred ccceEEecCCCCCCCCCC--CcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 455677777788888876 899999999999999999999976678999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----CCCeEEecCCCcccccccc
Q 019348 87 PNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----NLPAVLLGSKDKVSSSGLI 162 (342)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 162 (342)
+|+++++++++||+++|++++|++|.++.+++.++++.++++++|++......+... ....+.++..
T Consensus 82 ~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 152 (536)
T 3ni2_A 82 PSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSA--------- 152 (536)
T ss_dssp CSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCC---------
T ss_pred CCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCC---------
Confidence 999999999999999999999999999999999999999999999998776654432 3333333321
Q ss_pred ccccccccHHHHHhccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhh--hccccCCCeEEEE
Q 019348 163 SRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAH--QELVGELDHVVLC 240 (342)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--~~~~~~~~d~~~~ 240 (342)
......+.++..... .........++++++|+|||||||.||||++||+++.+.+...... ..+....+|++++
T Consensus 153 --~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~ 228 (536)
T 3ni2_A 153 --PDGCLHFSELTQADE--NEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILC 228 (536)
T ss_dssp --CTTCEETHHHHTSCG--GGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEE
T ss_pred --CCCccCHHHHhhccc--cccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEE
Confidence 122344555554332 2223345678999999999999999999999999998875432211 1334678899999
Q ss_pred ccchhHHHHHHHHHHHHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeeccc
Q 019348 241 VLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP 320 (342)
Q Consensus 241 ~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~ 320 (342)
.+|++|.+++...++.++..|+++++.+++++..+++.++++++|++.++|+++..+++.......++++||.+++||++
T Consensus 229 ~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~ 308 (536)
T 3ni2_A 229 VLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAP 308 (536)
T ss_dssp CSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSC
T ss_pred ecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCC
Confidence 99999999996778999999999999999999999999999999999999999999999987777889999999999999
Q ss_pred CCHHHHHHHHHhCCCCcccccC
Q 019348 321 LGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 321 l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+++++.+++++.||++++++.|
T Consensus 309 l~~~~~~~~~~~~~~~~l~~~Y 330 (536)
T 3ni2_A 309 LGKELEDTVRAKFPQARLGQGY 330 (536)
T ss_dssp CCHHHHHHHHHHCTTSEEEEEE
T ss_pred CCHHHHHHHHHHCCCCCccccc
Confidence 9999999999999879999987
No 2
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=8.8e-48 Score=358.43 Aligned_cols=326 Identities=24% Similarity=0.313 Sum_probs=263.5
Q ss_pred CCCCCCCCCceeecCCCCCCCCCCCCCCHHH-HHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCC
Q 019348 1 MEKSGYGRDGIYRSLRPPLVLPSDPSFSMVH-FLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKK 79 (342)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g 79 (342)
|+.....+.+++.+..++...|.. .++.+ ++.+.++++ |++|+++.+.++++||+||.++++++|+.|++.|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~--~~l~~~~l~~~~~~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~g 77 (548)
T 2d1s_A 1 MENMENDENIVVGPKPFYPIEEGS--AGTQLRKYMERYAKL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVD 77 (548)
T ss_dssp ------CTTSEECCCCSSCCCSSC--HHHHHHHHHHHHHHH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred CCCCCCCcceEecCCCCCCCCCCc--CcHHHHHHHhhhccc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCC
Confidence 455555666777777766666654 68999 899999999 99999985447899999999999999999999999999
Q ss_pred CEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----C--CCeEEecCC
Q 019348 80 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----N--LPAVLLGSK 153 (342)
Q Consensus 80 ~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~--~~~~~~~~~ 153 (342)
|+|+|+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++++....+... . ...+.++..
T Consensus 78 d~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (548)
T 2d1s_A 78 GRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSK 157 (548)
T ss_dssp CEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCS
T ss_pred CEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCc
Confidence 9999999999999999999999999999999999999999999999999999998876554332 1 122222211
Q ss_pred CccccccccccccccccHHHHHhccCCCCCCCCCCCC-----C-CCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhh
Q 019348 154 DKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVK-----Q-TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAH 227 (342)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 227 (342)
. ...+...|.++...... ......... + +++++|+|||||||.||||++||+++.+.+... .
T Consensus 158 ~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~--~ 225 (548)
T 2d1s_A 158 V---------DYRGYQCLDTFIKRNTP-PGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHA--R 225 (548)
T ss_dssp S---------CBTTBCBHHHHHHHTSC-TTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHH--T
T ss_pred c---------cccccccHHHHHhcCcc-ccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHh--h
Confidence 0 01123346666554321 101111122 3 899999999999999999999999998875442 2
Q ss_pred hc---cccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCC
Q 019348 228 QE---LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR 304 (342)
Q Consensus 228 ~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~ 304 (342)
.. +...++|++++..|++|.+++...++.++ .|+++++.+++++..+++.++++++|+++++|++++.|.+.....
T Consensus 226 ~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 304 (548)
T 2d1s_A 226 DPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLN 304 (548)
T ss_dssp CTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGG
T ss_pred chhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccc
Confidence 22 45678899999999999999855577778 999999999999999999999999999999999999999887666
Q ss_pred ccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 305 KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 305 ~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
..++++||.+++||+++++++.+++++.||++++++.|
T Consensus 305 ~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~Y 342 (548)
T 2d1s_A 305 KYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGY 342 (548)
T ss_dssp GSCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEE
T ss_pred cccccceeEEEEcCccCCHHHHHHHHHHcCCCceeecc
Confidence 67899999999999999999999999999778899887
No 3
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=3.6e-47 Score=354.72 Aligned_cols=323 Identities=24% Similarity=0.362 Sum_probs=258.4
Q ss_pred CCceeecCCCCCCCCCCCCCCHHHHHhhhcccCCCceEEE---eCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 019348 8 RDGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALI---DADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLI 84 (342)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~---~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i 84 (342)
...++.+..++.+.+. .|+.++|.+.++++|+++|++ +.+.++++||+||.++++++|+.|++.|+++||+|+|
T Consensus 4 ~~~~~~~~~~~~~~~~---~tl~~~l~~~a~~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i 80 (550)
T 3rix_A 4 AKNIKKGPAPFYPLED---GTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVV 80 (550)
T ss_dssp GGGSEECCCCSSCCCC---SCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred ccceeeCCCCCCCccc---CCHHHHHHHHHHhCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 3445556666555555 699999999999999999875 5545789999999999999999999999999999999
Q ss_pred ECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----C-CCeEEecCCCccccc
Q 019348 85 FAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----N-LPAVLLGSKDKVSSS 159 (342)
Q Consensus 85 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~ 159 (342)
+++|+++++++++||+++|++++|++|.++.+++.++++.++++++|++++....+... . ...++.....
T Consensus 81 ~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 155 (550)
T 3rix_A 81 CSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSK----- 155 (550)
T ss_dssp ECSSCTTTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCS-----
T ss_pred EcCCcccHHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCC-----
Confidence 99999999999999999999999999999999999999999999999998876654432 1 2223222111
Q ss_pred cccccccccccHHHHHhccCCCC----CC-CCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhh-ccccC
Q 019348 160 GLISRSSKIVSFHDLIELSGSVT----DI-PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ-ELVGE 233 (342)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~ 233 (342)
........+.++........ .. ......++++++|+|||||||.||||++||+++...+....... .....
T Consensus 156 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~ 232 (550)
T 3rix_A 156 ---TDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQII 232 (550)
T ss_dssp ---SCBTTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCC
T ss_pred ---ccccCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCC
Confidence 12233455666654432100 11 11222457899999999999999999999999988754322111 13456
Q ss_pred CCeEEEEccchhHHHHHHHHHHHHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceE
Q 019348 234 LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKL 313 (342)
Q Consensus 234 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~ 313 (342)
++|++++.+|++|.+|+ ..++.++..|+++++.+++++..+++.++++++|+++++|+++..|++.......++++||.
T Consensus 233 ~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 311 (550)
T 3rix_A 233 PDTAILSVVPFHHGFGM-FTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHE 311 (550)
T ss_dssp TTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCE
T ss_pred CCcEEEEechHHHHHHH-HHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccE
Confidence 88999999999999998 77889999999999999999999999999999999999999999999988777788999999
Q ss_pred EEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 314 VGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 314 ~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+++||+++++++.++|++.|+...+++.|
T Consensus 312 i~~gG~~l~~~~~~~~~~~~~~~~v~~~Y 340 (550)
T 3rix_A 312 IASGGAPLSKEVGEAVAKRFHLPGIRQGY 340 (550)
T ss_dssp EEECSSCCCHHHHHHHHHHTTCSCCEEEE
T ss_pred EEEecCCCCHHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999844588877
No 4
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=3.6e-47 Score=352.02 Aligned_cols=300 Identities=24% Similarity=0.322 Sum_probs=247.7
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.|+.++|.+.++++||++|+++.+.++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 16 ~~l~~~l~~~a~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 95 (517)
T 3r44_A 16 KNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVA 95 (517)
T ss_dssp GCHHHHHHHHHHHSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEE
T ss_pred cCHHHHHHHHHHhCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 79999999999999999999998444599999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (342)
+|++|.++.+++.+++++++++++|++......+............. ........+.+...... .....
T Consensus 96 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~ 164 (517)
T 3r44_A 96 VPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTV---------TDWIGADSLAERLRSAA--ADEPA 164 (517)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTC---------CEEEEHHHHHHHHHHCC--CCCCC
T ss_pred EecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEE---------EEccCcccHHHHhhccC--cCCCC
Confidence 99999999999999999999999999987766554321000000000 00000123344443333 33334
Q ss_pred CCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEE
Q 019348 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
....++++++|+|||||||.||||++||+++.+.+.. ....+....+|++++.+|++|.+++ ...+.++..|+++++
T Consensus 165 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~~~~G~~~v~ 241 (517)
T 3r44_A 165 VECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASS--WASTIDVRYRDRLLLPLPMFHVAAL-TTVIFSAMRGVTLIS 241 (517)
T ss_dssp CCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHH--HHHHSCCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEE
T ss_pred CCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHH--HHHhcCCCCCCEEEEeCchHHHHHH-HHHHHHHhcCeEEEE
Confidence 4567899999999999999999999999999988555 4455567889999999999999999 444444459999999
Q ss_pred ccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 267 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
.+.+++..+++.++++++|++.++|++++.|.+.+.....++++||.+++||+++++++.++|++. ++++++.|
T Consensus 242 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~~Y 315 (517)
T 3r44_A 242 MPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQGY 315 (517)
T ss_dssp CSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEEEE
T ss_pred eCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhc--CCcEEEee
Confidence 999999999999999999999999999999999876667788999999999999999999999998 58999887
No 5
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=1.6e-46 Score=346.85 Aligned_cols=293 Identities=21% Similarity=0.308 Sum_probs=241.3
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
+|+.++|.+.++++||++|+++.+.++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 81 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVP 81 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEE
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 47999999999999999999987556899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEE--cccchhhh-hccCCCeEEecCCCccccccccccccccccHHHHHhccC---C
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVIT--VPELWDKV-KDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG---S 180 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 180 (342)
+|++|.++.+++.+++++++++++++ +.+....+ ....... .+ .++++..... .
T Consensus 82 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~~~~~~~ 141 (504)
T 1t5h_X 82 ALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGSGAR-II-------------------FLGDLVRDGEPYSY 141 (504)
T ss_dssp EEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCCCCE-EE-------------------EGGGTEETTEECCC
T ss_pred EecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccccce-eE-------------------EecchhhcCccccc
Confidence 99999999999999999999999999 76655444 3221101 11 1111211100 0
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhcccc--CCCeEEEEccchhHHHHHHHHHHHHh
Q 019348 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG--ELDHVVLCVLPMFHVFGLSVILYDQL 258 (342)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~d~~~~~~p~~~~~g~~~~~~~~l 258 (342)
..........++++++|+|||||||.||||+++|+++.+.+... ...+.+ ..+|++++.+|++|.+++...++.++
T Consensus 142 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~--~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l 219 (504)
T 1t5h_X 142 GPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFM--STQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAAL 219 (504)
T ss_dssp SCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHH--HHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHH
T ss_pred CCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHH--HHhhCCCCCCCceEEeecchhhcchHHHHHHHHH
Confidence 01111134567899999999999999999999999998875543 333444 67899999999999999856789999
Q ss_pred hcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCC--CCccCCCCceEEEeecccCCHHHHHHHHHhCCCC
Q 019348 259 QKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (342)
Q Consensus 259 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~ 336 (342)
..|+++++.+.+++..+++.++++++|+++++|++++.|.+... ....++++||.+++||+++++++.++|++.+| .
T Consensus 220 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~-~ 298 (504)
T 1t5h_X 220 ALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLP-G 298 (504)
T ss_dssp HTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCC-S
T ss_pred HcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcC-c
Confidence 99999999999999999999999999999999999999987652 24457899999999999999999999999998 8
Q ss_pred cccccC
Q 019348 337 TIFQKI 342 (342)
Q Consensus 337 ~l~~~Y 342 (342)
++++.|
T Consensus 299 ~~~~~Y 304 (504)
T 1t5h_X 299 EKVNIY 304 (504)
T ss_dssp EEEEEE
T ss_pred ceeeee
Confidence 898887
No 6
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=1.1e-46 Score=350.56 Aligned_cols=295 Identities=24% Similarity=0.311 Sum_probs=247.9
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.|+.++|.+.++++||++|+++. ++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 25 ~tl~~~l~~~a~~~p~~~A~~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~ 102 (539)
T 1mdb_A 25 ETFGDLLRDRAAKYGDRIAITCG--NTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALP 102 (539)
T ss_dssp CCHHHHHHHHHHHHTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEE
T ss_pred CCHHHHHHHHHHHCCCCEEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEE
Confidence 69999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchh--------hhh-cc-CCCeEEecCCCccccccccccccccccHHHHHh
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWD--------KVK-DL-NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~--------~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (342)
+|++|.++.+++.++++.++++++|++++... .+. .. ....+...... . .+.++..
T Consensus 103 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~ 168 (539)
T 1mdb_A 103 VFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEA-----------E---EFLPLED 168 (539)
T ss_dssp EECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCC-----------T---TSEEGGG
T ss_pred ecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCc-----------c---chhhhhh
Confidence 99999999999999999999999999875421 111 11 12222222110 0 1111211
Q ss_pred ccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHH-HHH
Q 019348 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (342)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~ 255 (342)
... .........++++++|+|||||||.||||+++|+++.+.+.. ....+.+.++|++++.+|++|.+++.. .++
T Consensus 169 ~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~--~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~ 244 (539)
T 1mdb_A 169 LHT--EPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKR--SVEVCWLDHSTVYLAALPMAHNYPLSSPGVL 244 (539)
T ss_dssp CCC--CCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHH--HHHHHTCCTTCEEEECSCTTSHHHHHSSHHH
T ss_pred ccc--cccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHH--HHHhhCCCCCCEEEEeecccccchhhHHHHH
Confidence 111 111223456789999999999999999999999999988554 344455678999999999999999854 689
Q ss_pred HHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCC
Q 019348 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (342)
Q Consensus 256 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~ 335 (342)
.+|..|+++++.+.+++..+++.++++++|++.++|++++.|++.......++++||.+++||+++++++.++|++.++
T Consensus 245 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~- 323 (539)
T 1mdb_A 245 GVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFG- 323 (539)
T ss_dssp HHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTC-
T ss_pred HHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHhC-
Confidence 9999999999999999999999999999999999999999998876555668899999999999999999999999997
Q ss_pred CcccccC
Q 019348 336 ATIFQKI 342 (342)
Q Consensus 336 ~~l~~~Y 342 (342)
+++++.|
T Consensus 324 ~~~~~~Y 330 (539)
T 1mdb_A 324 CTLQQVF 330 (539)
T ss_dssp SEEEEEE
T ss_pred CcEEEEE
Confidence 8999887
No 7
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=2.6e-46 Score=370.30 Aligned_cols=325 Identities=37% Similarity=0.608 Sum_probs=268.9
Q ss_pred ceeecCCCCCCCCCCCCCCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC
Q 019348 10 GIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS 89 (342)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~ 89 (342)
.++.+..++.+.|.. .|+.++|.+.++++||++|+++.++++++||+||.++++++|+.|++.|+++||+|+|+++|+
T Consensus 46 ~~~~~~~~~~~~p~~--~tl~~~l~~~a~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns 123 (979)
T 3tsy_A 46 VIFRSKLPDIYIPNH--LSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNC 123 (979)
T ss_dssp CCBCCSSCCCCCCTT--SCHHHHHTTTGGGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSC
T ss_pred ceeecCCCCCCCCCC--CCHHHHHHHHHHhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCC
Confidence 345555666666665 899999999999999999999987678999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----CCCeEEecCCCccccccccccc
Q 019348 90 IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----NLPAVLLGSKDKVSSSGLISRS 165 (342)
Q Consensus 90 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 165 (342)
+++++++|||+++|++++|++|.++.+++.+++++++++++|++++....+... ....+.++..... ...
T Consensus 124 ~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 197 (979)
T 3tsy_A 124 PEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESV------PIP 197 (979)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTTS------CCC
T ss_pred HHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCcccc------cCC
Confidence 999999999999999999999999999999999999999999998776554432 2223333321110 111
Q ss_pred cccccHHHHHhccCCC-CCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhh--hccccCCCeEEEEcc
Q 019348 166 SKIVSFHDLIELSGSV-TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAH--QELVGELDHVVLCVL 242 (342)
Q Consensus 166 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--~~~~~~~~d~~~~~~ 242 (342)
.....+.++....... .........++++++|+|||||||.||||+++|+++.+.+...... ..+....+|++++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~ 277 (979)
T 3tsy_A 198 EGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVL 277 (979)
T ss_dssp TTEEEGGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECS
T ss_pred cccccHHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEEC
Confidence 2233444443322100 1122335678999999999999999999999999998875442211 133467899999999
Q ss_pred chhHHHHHHHHHHHHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCC
Q 019348 243 PMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLG 322 (342)
Q Consensus 243 p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~ 322 (342)
|++|.+++...++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.......++++||.+++||++++
T Consensus 278 p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~ 357 (979)
T 3tsy_A 278 PMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLG 357 (979)
T ss_dssp CSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCC
T ss_pred chHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCC
Confidence 99999999677899999999999999999999999999999999999999999999988777788999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccC
Q 019348 323 KELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~l~~~Y 342 (342)
+++.+++++.||++++++.|
T Consensus 358 ~~~~~~~~~~~~~~~l~~~Y 377 (979)
T 3tsy_A 358 KELEDAVNAKFPNAKLGQGY 377 (979)
T ss_dssp SSHHHHHHHHCTTCEEEECE
T ss_pred HHHHHHHHHHCCCCeEEeee
Confidence 99999999999879999988
No 8
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=3.1e-46 Score=348.37 Aligned_cols=308 Identities=27% Similarity=0.402 Sum_probs=256.2
Q ss_pred cCCCCCCCCCCCCCCHHHHHhhhcccCCCceEEEeCCCC------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Q 019348 14 SLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSD------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP 87 (342)
Q Consensus 14 ~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~ 87 (342)
...++.+.|. .|+.++|.+.++++||++|+++.+.+ +++||+||.++++++|+.|++.|+++||+|+|+++
T Consensus 9 ~~~p~~~~~~---~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~ 85 (549)
T 3g7s_A 9 IGFPSLYYPK---ISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIP 85 (549)
T ss_dssp CCCCCCCCCC---CCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred cCCCCCCcCC---CCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 3344444443 69999999999999999999987421 89999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----CCCeEEecCCCccccccccc
Q 019348 88 NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----NLPAVLLGSKDKVSSSGLIS 163 (342)
Q Consensus 88 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 163 (342)
|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.....+... ....+.+...
T Consensus 86 ~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 155 (549)
T 3g7s_A 86 NSIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGG---------- 155 (549)
T ss_dssp SSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETC----------
T ss_pred CCHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCC----------
Confidence 99999999999999999999999999999999999999999999998876655432 2222222211
Q ss_pred cccccccHHHHHhccCCCCCCCCCCCCC-CCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEcc
Q 019348 164 RSSKIVSFHDLIELSGSVTDIPDVSVKQ-TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVL 242 (342)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 242 (342)
....+.++..... .........+ +++++|+|||||||.||||+++|+++.+.+.. ....+....+|++++.+
T Consensus 156 ---~~~~~~~~~~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~~~~~ 228 (549)
T 3g7s_A 156 ---EVNSLSEVMDSGS--EDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQ--LAVATGLSHMDTIVGCM 228 (549)
T ss_dssp ---SSSCHHHHHHHSC--SCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHH--HHHHHCCCTTCEEECCS
T ss_pred ---CCcCHHHHHhcCc--cccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHH--HHHHcCCCCCCEEEEeC
Confidence 2335566665443 2222233334 89999999999999999999999999998655 44455668899999999
Q ss_pred chhHHHHHHHHHHHHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCc--cCCCCceEEEeeccc
Q 019348 243 PMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAP 320 (342)
Q Consensus 243 p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~--~~l~~lr~~~~gG~~ 320 (342)
|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|+++++|++++.|++...... .+++++|.+++||++
T Consensus 229 p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~ 307 (549)
T 3g7s_A 229 PMFHSAEF-GLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWP 307 (549)
T ss_dssp CTTSHHHH-HHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSC
T ss_pred cHHHHHHH-HHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCcc
Confidence 99999998 558899999999999999999999999999999999999999999988754433 678999999999999
Q ss_pred CCHHHHHHHHHh----CC--CCcccccC
Q 019348 321 LGKELMEDCQKN----IP--GATIFQKI 342 (342)
Q Consensus 321 l~~~~~~~~~~~----~~--~~~l~~~Y 342 (342)
+++++.+++++. ++ ++++++.|
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~Y 335 (549)
T 3g7s_A 308 VAPALVEKLLKLAAEKCNNPRLRHNQIW 335 (549)
T ss_dssp CCHHHHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhhcCCccccccceE
Confidence 999999999998 54 37888877
No 9
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=2.1e-46 Score=349.03 Aligned_cols=299 Identities=22% Similarity=0.276 Sum_probs=250.3
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.|+.++|.+.++++||++|+++. ++++||+||.++++++|+.|++.|+++||+|+|+++|+++++++++||+++|+++
T Consensus 30 ~tl~~~l~~~a~~~p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~ 107 (544)
T 3o83_A 30 QPLTRILTVGVQSHPHSLAIICG--ERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVV 107 (544)
T ss_dssp CCTTHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEE
T ss_pred CCHHHHHHHHHHhCCCceEEEcC--CCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEE
Confidence 78999999999999999999998 8899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchh--------hhhcc--CCCeEEecCCCccccccccccccccccHHHHHh
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWD--------KVKDL--NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (342)
+|+++..+.+++.++++.++++++|+++.... .+... ....+...... .....+.++..
T Consensus 108 vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 176 (544)
T 3o83_A 108 LNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQ-----------ATDFGLLDWIE 176 (544)
T ss_dssp EECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCC-----------TTSEEHHHHHH
T ss_pred ecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCC-----------ccccchhhhhh
Confidence 99999999999999999999999999876531 11111 12222222110 01112334443
Q ss_pred ccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHH-HHH
Q 019348 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (342)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~ 255 (342)
.... .........++++++|+|||||||.||||+++|+++.+.+.. ....+.+.++|++++.+|++|.+++.. .++
T Consensus 177 ~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~--~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~ 253 (544)
T 3o83_A 177 TPAE-TFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRA--SAEICGLNSNTRLLCALPAPHNFMLSSPGAL 253 (544)
T ss_dssp SCCS-SCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHH--HHHHTTCCTTCEEEECSCTTSHHHHHSSHHH
T ss_pred cccc-cccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHH--HHHHhCCCCCCeEEEecCcceEeecchHHHH
Confidence 3221 111223456789999999999999999999999999988655 445556788999999999999999844 589
Q ss_pred HHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCC
Q 019348 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (342)
Q Consensus 256 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~ 335 (342)
.++..|+++++.+++++..+++.++++++|++.++|+++..|++.......++++||.+++||+++++++.+++++.++
T Consensus 254 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~- 332 (544)
T 3o83_A 254 GVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVLN- 332 (544)
T ss_dssp HHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHHC-
T ss_pred HHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHhC-
Confidence 9999999999999999999999999999999999999999999887666778999999999999999999999999996
Q ss_pred CcccccC
Q 019348 336 ATIFQKI 342 (342)
Q Consensus 336 ~~l~~~Y 342 (342)
+++++.|
T Consensus 333 ~~~~~~Y 339 (544)
T 3o83_A 333 CKLQQVF 339 (544)
T ss_dssp SEEEEEE
T ss_pred CcEEeee
Confidence 8999887
No 10
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=3.8e-46 Score=347.04 Aligned_cols=299 Identities=21% Similarity=0.304 Sum_probs=248.2
Q ss_pred CCHHHHHhhhcccCCCceEEEeC--CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 27 FSMVHFLFRNSASYSSKLALIDA--DSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
.|+.++|.+.++++||++|+++. +.++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 18 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 97 (541)
T 1v25_A 18 LNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGA 97 (541)
T ss_dssp CCTHHHHHHHHHHSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 68999999999999999999952 2357999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccC-----CCeEEecCCCccccccccccccccccHHHHHhccC
Q 019348 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (342)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (342)
+++|++|.++.+++.+++++++++++|++++....+.... ...+...... .......++++.....
T Consensus 98 v~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 168 (541)
T 1v25_A 98 VLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEK---------APEGYLAYEEALGEEA 168 (541)
T ss_dssp EEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSC---------CCTTCEEHHHHCCSCC
T ss_pred EEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCC---------CCcccccHHHHhhccC
Confidence 9999999999999999999999999999987765543321 1222221110 0112334555543322
Q ss_pred CCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhh
Q 019348 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (342)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 259 (342)
. .....++++++|+|||||||.||||++||+++...+........+.+.++|++++.+|++|.+++ ..++.++.
T Consensus 169 --~---~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~ 242 (541)
T 1v25_A 169 --D---PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAW-CLPYAATL 242 (541)
T ss_dssp --C---CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHH-THHHHHHH
T ss_pred --C---cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHH-HHHHHHHh
Confidence 1 13445789999999999999999999999999876443222334556789999999999999998 67888999
Q ss_pred cCCeEEEccC-CCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcc
Q 019348 260 KGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (342)
Q Consensus 260 ~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l 338 (342)
.|+++++.+. +++..+++.++++++|+++++|++++.|++.......++++||.+++||+++++++.++| +.++ +++
T Consensus 243 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~g-~~~ 320 (541)
T 1v25_A 243 VGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARF-ERMG-VEV 320 (541)
T ss_dssp HTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHH-HHTT-CEE
T ss_pred cCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHH-HHhC-Cce
Confidence 9999999864 799999999999999999999999999988765555678999999999999999999999 6675 899
Q ss_pred cccC
Q 019348 339 FQKI 342 (342)
Q Consensus 339 ~~~Y 342 (342)
++.|
T Consensus 321 ~~~Y 324 (541)
T 1v25_A 321 RQGY 324 (541)
T ss_dssp EEEE
T ss_pred eecc
Confidence 9987
No 11
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=3.8e-46 Score=345.11 Aligned_cols=291 Identities=17% Similarity=0.250 Sum_probs=244.8
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
+||.++|.+.++++||++|+++. ++++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~ 78 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWR--DAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAY 78 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCE
T ss_pred CcHHHHHHHHHHHCCCceEEEeC--CceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 58999999999999999999998 7899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (342)
+|++|.++.+++.++++.+++++++++...... ......... ..+.+.............
T Consensus 79 vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~----~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 138 (512)
T 3fce_A 79 IPVDLSIPADRVQRIAENSGAKLLLSATAVTVT----DLPVRIVSE----------------DNLKDIFFTHKGNTPNPE 138 (512)
T ss_dssp EEEETTSCHHHHHHHHHHSCCCEEEESSCCCSS----CCSSEEEET----------------HHHHHHHHHTTTCCCCGG
T ss_pred EeeCCCCcHHHHHHHHHhcCCCEEEecCccccc----ccccceech----------------hhhhhhcccccccCCCcc
Confidence 999999999999999999999999997543211 011111110 112222221111122223
Q ss_pred CCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEE
Q 019348 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
....++++++|+|||||||.||||++||+++.+.+.. ....+....+|++++..|++|.+++ ..++.++..|+++++
T Consensus 139 ~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~ 215 (512)
T 3fce_A 139 HAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKW--AVEDFNLQTGQVFLNQAPFSFDLSV-MDIYPSLVTGGTLWA 215 (512)
T ss_dssp GSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHH--HHHHTTCCSSCEEEECSCTTSGGGH-HHHHHHHHTTCEEEE
T ss_pred ccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHH--HHHhcCCCCCCEEEEeCCccHhHHH-HHHHHHHhCCCEEEE
Confidence 3556789999999999999999999999999988554 4455667889999999999999998 779999999999999
Q ss_pred ccC---CCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 267 MGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 267 ~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
.++ +++..+++.++++++|++.++|++++.++........++++||.+++||+++++++.+++++.|+++++++.|
T Consensus 216 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 294 (512)
T 3fce_A 216 IDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTY 294 (512)
T ss_dssp CCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEE
T ss_pred CCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCc
Confidence 976 6899999999999999999999999999988877778899999999999999999999999999879999987
No 12
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=4.6e-46 Score=342.22 Aligned_cols=297 Identities=18% Similarity=0.197 Sum_probs=232.8
Q ss_pred CCHHHHHhhhcccCCCceEEEeCC-----CC--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHH
Q 019348 27 FSMVHFLFRNSASYSSKLALIDAD-----SD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~-----~~--~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (342)
.|+.++|.+.++++||++|+++.+ ++ +++||+||.++++++|+.|++.|+ +||+|+|+++|+++++++++||
T Consensus 24 ~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~lA~ 102 (480)
T 3t5a_A 24 RSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFLGA 102 (480)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHHHH
Confidence 799999999999999999999763 12 799999999999999999999996 9999999999999999999999
Q ss_pred HHhCCeEeccCC---CCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHh
Q 019348 100 IAIGAIASTANP---VYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (342)
Q Consensus 100 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (342)
+++|++++|+++ ..+.+++.++++.++++++|++.+....+........... ...+..++....
T Consensus 103 ~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 169 (480)
T 3t5a_A 103 LQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGES-------------PPSIIEVDLLDL 169 (480)
T ss_dssp HHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC-------------------CCEEEEGGGSCT
T ss_pred HHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhcccccc-------------ccceeEeccccc
Confidence 999999999999 7789999999999999999999887766554321100000 000000000000
Q ss_pred ccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCC------CeEEEEccchhHHHHH
Q 019348 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL------DHVVLCVLPMFHVFGL 250 (342)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~------~d~~~~~~p~~~~~g~ 250 (342)
... .........++++++|+|||||||.||||++||+++.+.+... ...+.... +|++++.+|++|.+|+
T Consensus 170 ~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 245 (480)
T 3t5a_A 170 DAP--NGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQL--MSGYFADTDGIPPPNSALVSWLPFYHDMGL 245 (480)
T ss_dssp TCC-----CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHH--HHHHCTTTTTCCCTTEEEEECCCTTSTTHH
T ss_pred ccc--cCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHH--HHHhccccccCCCCCCeEEEeCCCcCccHH
Confidence 000 1122334567899999999999999999999999998885553 33333444 8999999999999998
Q ss_pred HHHHHHHhhcCCeEEEccCC----CHHHHHHHHHhccceEEEecHHHHHHHHcC----CCCCccCCCCceEEEeecccCC
Q 019348 251 SVILYDQLQKGNCVVSMGKF----DIEMALRAIEKYRVTVWWVVPPIILALAKN----SLVRKFDISSLKLVGSGAAPLG 322 (342)
Q Consensus 251 ~~~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~----~~~~~~~l~~lr~~~~gG~~l~ 322 (342)
...++.++..|+++++.++. ++..+++.++++++| +..+|+++..++.. ......++++||.+++||++++
T Consensus 246 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG~~l~ 324 (480)
T 3t5a_A 246 VIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGSERVQ 324 (480)
T ss_dssp HHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECCTTCC
T ss_pred HHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecCCcCC
Confidence 67889999999999998753 899999999999999 78888888777763 3344567999999999999999
Q ss_pred HHHHHHHHHhCC-----CCcccccC
Q 019348 323 KELMEDCQKNIP-----GATIFQKI 342 (342)
Q Consensus 323 ~~~~~~~~~~~~-----~~~l~~~Y 342 (342)
+++.++|+++|+ ++.+++.|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~Y 349 (480)
T 3t5a_A 325 AATIKRFADRFARFNLQERVIRPSY 349 (480)
T ss_dssp HHHHHHHHHHSGGGTCCGGGEEEEE
T ss_pred HHHHHHHHHHHhhcCCChhhccccc
Confidence 999999999984 35688877
No 13
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4e-45 Score=338.14 Aligned_cols=289 Identities=18% Similarity=0.251 Sum_probs=248.3
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCChHHHHHHHHHHhCCe
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (342)
+|+.++|.+.++++||++|+++. ++++||+||.++++++|+.|++. |.++|++|+++++|+++++++++||+++|++
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQ--GQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHP 78 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCC
T ss_pred CcHHHHHHHHHHHCCCCeEEEcC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCE
Confidence 58999999999999999999997 88999999999999999999875 8889999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCC
Q 019348 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (342)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (342)
++|+++.++.+++.++++.++++++|++......... .......+.++...... ....
T Consensus 79 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~-~~~~ 136 (511)
T 3e7w_A 79 YIPVDLSIPSERIAKIIESSGAELLIHAAGLSIDAVG---------------------QQIQTVSAEELLENEGG-SVSQ 136 (511)
T ss_dssp EEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTCCC---------------------CSSCEEEHHHHHTSCSC-CCCG
T ss_pred EEecCCCChHHHHHHHHHhCCCCEEEecccccchhcc---------------------cccceecHhhhhccccC-Cccc
Confidence 9999999999999999999999999997543211110 01112233444433221 1122
Q ss_pred CCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEE
Q 019348 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (342)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v 265 (342)
.....++++++|+|||||||.||||++||+++.+.+.. ....+....+|++++..|++|.+++ ..++.++..|++++
T Consensus 137 ~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~ 213 (511)
T 3e7w_A 137 DQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDW--ICADFPVSGGKIFLNQAPFSFDLSV-MDLYPCLQSGGTLH 213 (511)
T ss_dssp GGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHH--HHHHSTTTTTCEEEECSCTTSTHHH-HHHHHHHHTTCEEE
T ss_pred cccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHH--HHHhcCCCccceEEEeCCccHHHHH-HHHHHHHhcCCEEE
Confidence 23456789999999999999999999999999988554 4445566789999999999999998 78999999999999
Q ss_pred EccC---CCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 266 SMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 266 ~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+.+. +++..+++.++++++|++.++|++++.++.........++++|.+++||+++++++.+++++.|+++++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 293 (511)
T 3e7w_A 214 CVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTY 293 (511)
T ss_dssp ECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECC
T ss_pred EcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCc
Confidence 9876 6899999999999999999999999999998877777899999999999999999999999999879999998
No 14
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=8e-45 Score=340.21 Aligned_cols=302 Identities=23% Similarity=0.299 Sum_probs=249.1
Q ss_pred CCHH-HHHhhhcccCCCceEEEeCC---CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHh
Q 019348 27 FSMV-HFLFRNSASYSSKLALIDAD---SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (342)
Q Consensus 27 ~~l~-~~l~~~~~~~p~~~a~~~~~---~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (342)
+|+. ++|.+.++++||++|+++.+ .++++||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++
T Consensus 55 ~n~~~~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~~ 134 (580)
T 3etc_A 55 FNFAYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLHKL 134 (580)
T ss_dssp CCHHHHTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 6766 99999999999999998632 2479999999999999999999999999999999999999999999999999
Q ss_pred CCeEeccCCCCCHHHHHHHhhhcCceEEEEcccch--hhhhcc----C---CCeEEecCCCccccccccccccccccHHH
Q 019348 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELW--DKVKDL----N---LPAVLLGSKDKVSSSGLISRSSKIVSFHD 173 (342)
Q Consensus 103 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (342)
|++++|++|.++.+++.+++++++++++|++.+.. ..+.+. . ...+.++.. ...++..+.+
T Consensus 135 Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 204 (580)
T 3etc_A 135 GAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGD----------VLEGWIDFRK 204 (580)
T ss_dssp TCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSS----------CCTTCEEHHH
T ss_pred CEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCc----------cccccccHHH
Confidence 99999999999999999999999999999987654 332221 1 223333221 2344566777
Q ss_pred HHhccCCCCCCCC--CCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHH
Q 019348 174 LIELSGSVTDIPD--VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLS 251 (342)
Q Consensus 174 ~~~~~~~~~~~~~--~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~ 251 (342)
.+........... ....++++++|+|||||||.||+|.++|.+++..+.. .........++++++..|++|..+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (580)
T 3etc_A 205 ELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILT--AKYWQNVEDDGLHYTVADSGWGKCVW 282 (580)
T ss_dssp HHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHH--HHTTSCCCTTCEEEECCCTTSTHHHH
T ss_pred HHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHH--HHHhhCCCCCceEEEeCChHHHHHHH
Confidence 6655431111111 2457889999999999999999999999988876433 34445567889999999999988885
Q ss_pred HHHHHHhhcCCeEEEc--cCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHH
Q 019348 252 VILYDQLQKGNCVVSM--GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDC 329 (342)
Q Consensus 252 ~~~~~~l~~G~~~v~~--~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~ 329 (342)
..++.++..|+++++. ..+++..+++.++++++|+++++|++++.|.+.. ....++++||.+++||+++++++.++|
T Consensus 283 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~l~~lr~i~~gGe~l~~~~~~~~ 361 (580)
T 3etc_A 283 GKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-LSHYNFSTLKYAVVAGEPLNPEVFNRF 361 (580)
T ss_dssp HTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC-C---CCTTCCEEEECSSCCCHHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc-cccCCCccceEEEEccCCCCHHHHHHH
Confidence 6688999999999987 5789999999999999999999999999999863 455678999999999999999999999
Q ss_pred HHhCCCCcccccC
Q 019348 330 QKNIPGATIFQKI 342 (342)
Q Consensus 330 ~~~~~~~~l~~~Y 342 (342)
++.++ +++++.|
T Consensus 362 ~~~~g-~~i~~~Y 373 (580)
T 3etc_A 362 LEFTG-IKLMEGF 373 (580)
T ss_dssp HHHHS-CCCEEEE
T ss_pred HHHhC-CeEeccc
Confidence 99987 8999987
No 15
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=5.8e-45 Score=344.04 Aligned_cols=301 Identities=22% Similarity=0.267 Sum_probs=249.8
Q ss_pred CCCCCCCCCCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHH
Q 019348 19 LVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (342)
Q Consensus 19 ~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (342)
...+++ .++.++|.++++ ||++|+++. ++++||+||.++++++|+.|++.|+++||+|+++++|+.+++++++|
T Consensus 21 ~~~~~~--~~l~~~~~~~a~--pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA 94 (617)
T 3rg2_A 21 KGYWQD--LPLTDILTRHAA--SDSIAVIDG--ERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFA 94 (617)
T ss_dssp TTSCCC--CCTTHHHHTTTT--CCSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred cCCCCc--CCHHHHHHHhhC--CCCeEEecC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 345555 799999999988 999999998 88999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchh--------hh-hcc-CCCeEEecCCCcccccccccccccc
Q 019348 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD--------KV-KDL-NLPAVLLGSKDKVSSSGLISRSSKI 168 (342)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~--------~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (342)
|+++|++++|++|..+.+++.++++.+++++++++..... .. ... ....+..... ...
T Consensus 95 ~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 162 (617)
T 3rg2_A 95 LLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLND------------SGE 162 (617)
T ss_dssp HHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETC------------CST
T ss_pred HHhcCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeeccc------------ccc
Confidence 9999999999999999999999999999999999876531 11 111 1222222111 011
Q ss_pred ccHHHHHhccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHH
Q 019348 169 VSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVF 248 (342)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 248 (342)
..+.+...... .........++++++|+|||||||.||||+++|+++.+.+.. ....+.+..+|++++..|++|.+
T Consensus 163 ~~~~~~~~~~~--~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~~~~ 238 (617)
T 3rg2_A 163 HNLQDAINHPA--EDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRR--SVEICQFTQQTRYLCAIPAAHNY 238 (617)
T ss_dssp TBHHHHHHSCC--SSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHH--HHHHHTCCTTCEEEECSCTTSHH
T ss_pred cchhhhhcccc--cccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHH--HHHhcCCCCcceEEEeccchhhh
Confidence 22334433322 222334456789999999999999999999999999988655 44455668899999999999999
Q ss_pred HHHH-HHHHHhhcCCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCC--ccCCCCceEEEeecccCCHHH
Q 019348 249 GLSV-ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR--KFDISSLKLVGSGAAPLGKEL 325 (342)
Q Consensus 249 g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~--~~~l~~lr~~~~gG~~l~~~~ 325 (342)
++.. .++.++..|+++++.++.++..+++.++++++|++.++|+++..+++..... ..++++||.+++||+++++++
T Consensus 239 ~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~ 318 (617)
T 3rg2_A 239 AMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATL 318 (617)
T ss_dssp HHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHH
T ss_pred hhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHH
Confidence 9844 5899999999999999899999999999999999999999999988754332 236899999999999999999
Q ss_pred HHHHHHhCCCCcccccC
Q 019348 326 MEDCQKNIPGATIFQKI 342 (342)
Q Consensus 326 ~~~~~~~~~~~~l~~~Y 342 (342)
.++|.+.++ +++++.|
T Consensus 319 ~~~~~~~~~-~~~~~~Y 334 (617)
T 3rg2_A 319 AARIPAEIG-CQLQQVF 334 (617)
T ss_dssp HHHHHHHTC-SEEEEEE
T ss_pred HHHHHHHhC-CcEEEEe
Confidence 999999997 8999987
No 16
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=2.6e-45 Score=345.41 Aligned_cols=281 Identities=15% Similarity=0.137 Sum_probs=239.3
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.|+.++|.+.++++||++|+++. ++++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|+++
T Consensus 27 ~tl~~~~~~~a~~~Pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~ 104 (620)
T 4dg8_A 27 PTVVARFSEMAALHPHREAIRDR--FGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHY 104 (620)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 79999999999999999999998 7899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (342)
+|++|.++.+++.++++++++++++++......... ........ . .... .....
T Consensus 105 vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~~~~---------------------~-~~~~--~~~~~ 158 (620)
T 4dg8_A 105 LYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANG--LPCVPVRH---------------------L-PAAP--ASVAR 158 (620)
T ss_dssp EECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCTT--SCEEEGGG---------------------C-CCCC--CCSSC
T ss_pred EeeCccChHHHHHHHHHhCCCcEEEecCcccccccC--Cceeeecc---------------------C-CcCC--ccccC
Confidence 999999999999999999999999976543221111 11111000 0 0000 11122
Q ss_pred CCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEE
Q 019348 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
....++++++|+|||||||.||||+++|+++.+.+.. ...+...++|++++..|++|..++ ..++.+|..|+++++
T Consensus 159 ~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~---~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 234 (620)
T 4dg8_A 159 PCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG---QSFLAFAPQMRFLVNSPLSFDAAT-LEIWGALLNGGCCVL 234 (620)
T ss_dssp CCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS---CGGGTTCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEE
T ss_pred CCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH---HHhhCCCCCCEEEEECccCHHHHH-HHHHHHHhcCCEEEe
Confidence 3346789999999999999999999999999876432 334556789999999999999998 779999999999999
Q ss_pred cc--CCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 267 MG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 267 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
.+ .+++..+++.++++++|+++++|++++.|++.. ..++++||.+++||++++++..+++.+.++++++++.|
T Consensus 235 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 309 (620)
T 4dg8_A 235 NDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---PDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGY 309 (620)
T ss_dssp CCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEE
T ss_pred CccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---hhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeE
Confidence 64 579999999999999999999999999998743 34688999999999999999999999998889999988
No 17
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.5e-44 Score=335.67 Aligned_cols=299 Identities=22% Similarity=0.323 Sum_probs=240.0
Q ss_pred CHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEe
Q 019348 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (342)
Q Consensus 28 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (342)
++.+++.+.++ +||++|+++. ++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++
T Consensus 25 ~~~~~l~~~~~-~p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 101 (529)
T 2v7b_A 25 FAAYLFRLNET-RAGKTAYIDD--TGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPV 101 (529)
T ss_dssp HHHHHHHHTGG-GTTSEEEECS--SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHhhhc-cCCceEEEeC--CCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEE
Confidence 48899999999 9999999987 68999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc-----CC-CeEEe-cCCCccccccccccccccccHHHHHhccCC
Q 019348 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL-----NL-PAVLL-GSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (342)
Q Consensus 108 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (342)
|+++.++.+++.+++++++++++|++++....+... .. ..+.. +... ........++++.....
T Consensus 102 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~- 172 (529)
T 2v7b_A 102 VANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRE--------SEPRLAPLFEELIDAAA- 172 (529)
T ss_dssp ECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC--------------CCCBHHHHHHTSC-
T ss_pred ecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccc--------cccccccchhhhhccCC-
Confidence 999999999999999999999999998776544332 11 22222 2110 00011224566554322
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHH-HHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhh
Q 019348 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNF-IAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (342)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l-~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 259 (342)
.........++++++|+|||||||.||||++||+++ ...... ....+.+.++|++++..|++|.+++...++.++.
T Consensus 173 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 249 (529)
T 2v7b_A 173 -PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELY--AKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLS 249 (529)
T ss_dssp -CCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHT--CCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHH
T ss_pred -CcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHH--hhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHh
Confidence 222233456789999999999999999999999999 554222 3334556789999999999999998666788999
Q ss_pred cCCeEEEc-cCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcc
Q 019348 260 KGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (342)
Q Consensus 260 ~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l 338 (342)
.|+++++. +.+++..+++.++++++|+++++|+++..+++..........++|.+++||+++++++.++|++.|+ +++
T Consensus 250 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~g-~~i 328 (529)
T 2v7b_A 250 VGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHFG-CEI 328 (529)
T ss_dssp HTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHHHHHHHHHHHS-CCE
T ss_pred cCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHHHHHHHHHHhC-Cce
Confidence 99999988 6789999999999999999999999999999876544332348999999999999999999999996 899
Q ss_pred cccC
Q 019348 339 FQKI 342 (342)
Q Consensus 339 ~~~Y 342 (342)
++.|
T Consensus 329 ~~~Y 332 (529)
T 2v7b_A 329 LDGI 332 (529)
T ss_dssp EEEE
T ss_pred eeeE
Confidence 9887
No 18
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=6.9e-45 Score=340.60 Aligned_cols=283 Identities=16% Similarity=0.213 Sum_probs=240.2
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.++.++|.+.++++||++|+++. ++++||+||.++++++|+.|++.|+++||+|+|+++|+++++++++||+++|+++
T Consensus 75 ~~l~~~l~~~a~~~pd~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 152 (570)
T 4gr5_A 75 ACVHELFEAQAARAPDAVALLHE--ADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGY 152 (570)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHCCCCeEEECC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 69999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (342)
+|++|.++.+++.++++.+++++++++.+....+... ..+.+... ...... .....
T Consensus 153 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~--------------------~~~~~~--~~~~~ 208 (570)
T 4gr5_A 153 TMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRLTGT--TTLYVEDE--------------------AASDAP--AGNLA 208 (570)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSSCSS--EEEECCC-----------------------------CCCCC
T ss_pred EEcCCCChHHHHHHHHHhcCCCEEEecchhhhcccCC--cceeeecc--------------------cccccc--ccccC
Confidence 9999999999999999999999999987654433221 11111110 000000 11222
Q ss_pred CCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEE
Q 019348 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
....++++++|+|||||||.||||+++|+++.+.... .....+.++|++++..|++|..+. ..++.++..|+++++
T Consensus 209 ~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~---~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 284 (570)
T 4gr5_A 209 TGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG---QDYAGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARCVL 284 (570)
T ss_dssp CCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS---CCSSCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEEEE
T ss_pred CCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh---hhhcCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEEEE
Confidence 3456789999999999999999999999999876432 334456789999999999987666 678999999999999
Q ss_pred cc--CCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 267 MG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 267 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
.+ .+++..+++.++++++|++.++|++++.|++.. ..++++||.+++||+++++++.+++++.+++++++++|
T Consensus 285 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~---~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 359 (570)
T 4gr5_A 285 QSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEV---PEAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGY 359 (570)
T ss_dssp CSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhc---hhhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEee
Confidence 86 478999999999999999999999999998764 34688999999999999999999999999889999987
No 19
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=8.8e-45 Score=344.37 Aligned_cols=308 Identities=23% Similarity=0.302 Sum_probs=248.4
Q ss_pred CHHHHHhhhcccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhC
Q 019348 28 SMVHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (342)
Q Consensus 28 ~l~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (342)
++.++|.++++++||++|+++.+ .++++||+||.+++.++|+.|++.|+++||+|+|+++|++++++++|||+++|
T Consensus 77 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~G 156 (652)
T 1pg4_A 77 LAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIG 156 (652)
T ss_dssp HHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 46788889999999999999732 24789999999999999999999999999999999999999999999999999
Q ss_pred CeEeccCCCCCHHHHHHHhhhcCceEEEEcccchh---------hh----hcc---CCC-eEEecCCCcccccccccccc
Q 019348 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KV----KDL---NLP-AVLLGSKDKVSSSGLISRSS 166 (342)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~----~~~---~~~-~~~~~~~~~~~~~~~~~~~~ 166 (342)
++++|+++.++.+++.+++++++++++|+++.... .+ ... ... .+.++....... ....
T Consensus 157 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~----~~~~ 232 (652)
T 1pg4_A 157 AVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDID----WQEG 232 (652)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCC----CCBT
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCccc----ccCC
Confidence 99999999999999999999999999999876432 11 111 112 333322110000 0011
Q ss_pred ccccHHHHHhccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhH
Q 019348 167 KIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFH 246 (342)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 246 (342)
....|.+++.... .........++++++|+|||||||.||||+++|++++..+.. .....+.+.++|++++..|++|
T Consensus 233 ~~~~~~~~~~~~~--~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~ 309 (652)
T 1pg4_A 233 RDLWWRDLIEKAS--PEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAT-TFKYVFDYHPGDIYWCTADVGW 309 (652)
T ss_dssp TEEEHHHHHTTSC--SCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHH-HHHHHTTCCTTCEEEECSCTTS
T ss_pred CceeHHHHHhhcC--CCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHH-HHHHhcCCCCCCEEEEccCCee
Confidence 2245677765433 222334456789999999999999999999999998765321 1233455678999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEccC----CCHHHHHHHHHhccceEEEecHHHHHHHHcCCC--CCccCCCCceEEEeeccc
Q 019348 247 VFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAP 320 (342)
Q Consensus 247 ~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~l~~lr~~~~gG~~ 320 (342)
+.|+...++.+|..|+++++.+. +++..+++.++++++|+++++|++++.|.+... ....++++||.+++||++
T Consensus 310 ~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~ 389 (652)
T 1pg4_A 310 VTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEP 389 (652)
T ss_dssp HHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSC
T ss_pred eechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCC
Confidence 99986678999999999999864 589999999999999999999999999998764 345678999999999999
Q ss_pred CCHHHHHHHHHhCC--CCcccccC
Q 019348 321 LGKELMEDCQKNIP--GATIFQKI 342 (342)
Q Consensus 321 l~~~~~~~~~~~~~--~~~l~~~Y 342 (342)
+++++.+++++.+| ++++++.|
T Consensus 390 l~~~~~~~~~~~~g~~~~~i~~~Y 413 (652)
T 1pg4_A 390 INPEAWEWYWKKIGKEKCPVVDTW 413 (652)
T ss_dssp CCHHHHHHHHHHTTTTCSCEEEEB
T ss_pred CCHHHHHHHHHHhCCCCCcEEccc
Confidence 99999999999986 37888877
No 20
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=1.1e-44 Score=336.02 Aligned_cols=291 Identities=15% Similarity=0.174 Sum_probs=245.1
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.|+.+.|.+.++++||++|+.+. ++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 4 ~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~ 81 (521)
T 3l8c_A 4 KDMIDSIEQFAQTQADFPVYDCL--GERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAY 81 (521)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHCCCCcceecC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999987 8899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (342)
+|++|.++.+++.++++.++++++|++++....+... ..+. ...+........ .....
T Consensus 82 vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~~~--~~~~------------------~~~~~~~~~~~~--~~~~~ 139 (521)
T 3l8c_A 82 IPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIEGI--SLVS------------------LSEIESAKLAEM--PYERT 139 (521)
T ss_dssp EEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCTTS--EEEE------------------HHHHHHHHHHTC--CCCCS
T ss_pred EecCccccHHHHHHHHHhCCCCEEEecCccccccccC--cccc------------------hhhhhhcccccC--CcccC
Confidence 9999999999999999999999999987654322111 0000 001111111111 22223
Q ss_pred CCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEE
Q 019348 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
....++++++|+|||||||.||||++||+++.+.+........+....++++++..|++|..++ ..++.++..|+++++
T Consensus 140 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~~~ 218 (521)
T 3l8c_A 140 HSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSV-MYWAPTLALGGTLFA 218 (521)
T ss_dssp SCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGH-HHHHHHHHTTCEEEE
T ss_pred CCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHH-HHHHHHHhcCCEEEE
Confidence 4557789999999999999999999999999987554333333556788999999999999888 788999999999999
Q ss_pred ccCC---CHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 267 MGKF---DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 267 ~~~~---~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
.+.. ++..+++.+.++++|++.++|+++..+.........++++||.+++||+++++++.+++.+.|+++++++.|
T Consensus 219 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~Y 297 (521)
T 3l8c_A 219 LPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAY 297 (521)
T ss_dssp CCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEE
T ss_pred cCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCc
Confidence 8764 899999999999999999999999999988877777899999999999999999999999999879999988
No 21
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=1.4e-44 Score=334.37 Aligned_cols=293 Identities=22% Similarity=0.299 Sum_probs=240.2
Q ss_pred CCCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCe
Q 019348 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (342)
Q Consensus 26 ~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (342)
+.|+.++|.+.++++||++|+++. ++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 5 ~~tl~~~l~~~a~~~pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 82 (509)
T 3ivr_A 5 DFTLADVYRRNAALFPDRTAFMVD--GVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAI 82 (509)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCE
T ss_pred cCCHHHHHHHHHHHCCCceEEEEC--CcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 379999999999999999999997 889999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc-----CCCeEEecCCCccccccccccccccccHHHHHhccCC
Q 019348 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL-----NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (342)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (342)
++|++|.++.+++.++++.++++++|++.+....+... ....+...... ...+.++......
T Consensus 83 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 149 (509)
T 3ivr_A 83 LLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDG-------------SGPFAPFKDLASD 149 (509)
T ss_dssp EEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCC-------------CSSCEEGGGTCCC
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCC-------------CcChhhHhhccCC
Confidence 99999999999999999999999999998876552211 12222221110 0111222221110
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhc
Q 019348 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (342)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~ 260 (342)
.........++++++|+|||||||.||||+++|+++.+.+.. ....+.+.++|++++.+|++|.+++ ...+.++..
T Consensus 150 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~~~~ 225 (509)
T 3ivr_A 150 -TPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSS--LVDAWRLTEADVNLGMLPLFHVTGL-GLMLTLQQA 225 (509)
T ss_dssp -SCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHH--HHHHTTCCTTCEEEECSCTTSHHHH-HHHHHHHHH
T ss_pred -CCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHH--HHHhhCCCCCcEEEEeCCCcchhHH-HHHHHHHHh
Confidence 222334567889999999999999999999999999988555 4455667889999999999999999 555555555
Q ss_pred CCeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccc
Q 019348 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (342)
Q Consensus 261 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~ 340 (342)
|++.++...+++..+++.++++++|++.++|+++..|++.. ...+++++|.++.||++ +..+++++.++++++++
T Consensus 226 ~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~ 300 (509)
T 3ivr_A 226 GGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APAQLASLRAVTGLDTP---ETIERFEATCPNATFWA 300 (509)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEE
T ss_pred CCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--cccchhhhheecccCCh---HHHHHHHHhcCCCeEEc
Confidence 55555556889999999999999999999999999999876 45678899999999987 89999999997799999
Q ss_pred cC
Q 019348 341 KI 342 (342)
Q Consensus 341 ~Y 342 (342)
.|
T Consensus 301 ~Y 302 (509)
T 3ivr_A 301 TF 302 (509)
T ss_dssp EE
T ss_pred cc
Confidence 87
No 22
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=2.1e-44 Score=341.98 Aligned_cols=309 Identities=21% Similarity=0.303 Sum_probs=248.6
Q ss_pred CHHHHHhhhcccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCChHHHHHHHHHHh
Q 019348 28 SMVHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (342)
Q Consensus 28 ~l~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (342)
++.++|.++++++||++|+++.+ .++++||+||.+++.++|+.|+ +.|+++||+|+|+++|++++++++|||+++
T Consensus 83 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~ 162 (663)
T 1ry2_A 83 ACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRI 162 (663)
T ss_dssp HHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 57788889999999999999732 3578999999999999999999 999999999999999999999999999999
Q ss_pred CCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchh---------hhhcc-----CCC-eEEecCCCccccccccccccc
Q 019348 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KVKDL-----NLP-AVLLGSKDKVSSSGLISRSSK 167 (342)
Q Consensus 103 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~ 167 (342)
|++++|+++.++.+++.+++++++++++|+++.... .+.+. ... .+.++...... .. .....
T Consensus 163 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~--~~~~~ 239 (663)
T 1ry2_A 163 GAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPS-VA--FHAPR 239 (663)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSS-CC--CCSSS
T ss_pred CCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCc-cc--cCCCc
Confidence 999999999999999999999999999999876432 11111 112 23332211000 00 00112
Q ss_pred cccHHHHHhccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHH
Q 019348 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHV 247 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 247 (342)
...|.+++.... .........++++++|+|||||||.||||+++|++++..+.. .....+...++|++++..|++|+
T Consensus 240 ~~~~~~~~~~~~--~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~ 316 (663)
T 1ry2_A 240 DLDWATEKKKYK--TYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALL-TMRYTFDTHQEDVFFTAGDIGWI 316 (663)
T ss_dssp EEEHHHHHTTSC--SCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHH-HHHHHSCCCSSCEEEECSCTTSH
T ss_pred cccHHHHHhhcC--CCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHH-HHHHhcCCCCCcEEEEcCCcHHh
Confidence 345666665432 222334556789999999999999999999999998765321 12334566789999999999999
Q ss_pred HHHHHHHHHHhhcCCeEEEccC----CCHHHHHHHHHhccceEEEecHHHHHHHHcCCC--CCccCCCCceEEEeecccC
Q 019348 248 FGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPL 321 (342)
Q Consensus 248 ~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~l~~lr~~~~gG~~l 321 (342)
.+....++.+|..|+++++.+. +++..+++.|+++++|+++++|++++.|.+... ....++++||.+++||+++
T Consensus 317 ~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l 396 (663)
T 1ry2_A 317 TGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPI 396 (663)
T ss_dssp HHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCC
T ss_pred hhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCC
Confidence 9986678999999999999864 589999999999999999999999999988764 3456799999999999999
Q ss_pred CHHHHHHHHHhCC--CCcccccC
Q 019348 322 GKELMEDCQKNIP--GATIFQKI 342 (342)
Q Consensus 322 ~~~~~~~~~~~~~--~~~l~~~Y 342 (342)
++++.+++++.+| ++++++.|
T Consensus 397 ~~~~~~~~~~~~g~~~~~i~~~Y 419 (663)
T 1ry2_A 397 AAEVWEWYSEKIGKNEIPIVDTY 419 (663)
T ss_dssp CHHHHHHHHHTTSCSSSCEEECB
T ss_pred CHHHHHHHHHHhCCCCceEEEeE
Confidence 9999999999986 47888887
No 23
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=6.2e-44 Score=333.70 Aligned_cols=299 Identities=16% Similarity=0.199 Sum_probs=246.4
Q ss_pred CHHHHHhhhccc-----CCCceEEEeCC---CCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCChHHHHHHH
Q 019348 28 SMVHFLFRNSAS-----YSSKLALIDAD---SDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLG 98 (342)
Q Consensus 28 ~l~~~l~~~~~~-----~p~~~a~~~~~---~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA 98 (342)
++.++|.+.+++ +||++|+++.+ .++++||+||.++++++|+.|++. |+++||+|+|+++|+++++++++|
T Consensus 39 ~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA 118 (570)
T 3c5e_A 39 FASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILG 118 (570)
T ss_dssp HHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 457889888888 99999999742 247899999999999999999998 999999999999999999999999
Q ss_pred HHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----C-CC-eEEecCCCccccccccccccccccHH
Q 019348 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----N-LP-AVLLGSKDKVSSSGLISRSSKIVSFH 172 (342)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (342)
|+++|++++|++|.++.+++.++++.++++++|++++....+... . .. .+.++.. ...++..+.
T Consensus 119 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 188 (570)
T 3c5e_A 119 CIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEK----------SCDGWLNFK 188 (570)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSS----------CCTTSEEHH
T ss_pred HHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEeccc----------CccccccHH
Confidence 999999999999999999999999999999999998876655332 1 11 2222211 112334566
Q ss_pred HHHhccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHH
Q 019348 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 252 (342)
+++.... .........++++++|+|||||||.||||+++|+ ++........ ..+.+..+|++++..|++|.+++..
T Consensus 189 ~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~~~~ 264 (570)
T 3c5e_A 189 KLLNEAS--TTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGLQASDIMWTISDTGWILNILC 264 (570)
T ss_dssp HHHHHSC--SCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSCCTTCEEEECCCTTSHHHHHH
T ss_pred HHhhccc--ccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCCCCCceEEEcCchHHHHHHHH
Confidence 6655433 2222334567899999999999999999999999 4441111112 4455678999999999999999855
Q ss_pred HHHHHhhcCCeEEEcc--CCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHH
Q 019348 253 ILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQ 330 (342)
Q Consensus 253 ~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 330 (342)
.++.++..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.. ....++++||.+++||+++++++.++|+
T Consensus 265 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~lr~i~~gGe~l~~~~~~~~~ 343 (570)
T 3c5e_A 265 SLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSSYKFPHLQNCVTVGESLLPETLENWR 343 (570)
T ss_dssp TTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTTCCCTTCCEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-ccccccccceEEEEcCCcCCHHHHHHHH
Confidence 7899999999999986 689999999999999999999999999999873 3445789999999999999999999999
Q ss_pred HhCCCCcccccC
Q 019348 331 KNIPGATIFQKI 342 (342)
Q Consensus 331 ~~~~~~~l~~~Y 342 (342)
+.++ +++++.|
T Consensus 344 ~~~g-~~i~~~Y 354 (570)
T 3c5e_A 344 AQTG-LDIRESY 354 (570)
T ss_dssp HHHS-CCCEEEE
T ss_pred HHhC-Cchhhcc
Confidence 9886 8999987
No 24
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=1.7e-44 Score=332.99 Aligned_cols=292 Identities=24% Similarity=0.330 Sum_probs=242.3
Q ss_pred HHHhhhcccCCCceEEEeC-CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEecc
Q 019348 31 HFLFRNSASYSSKLALIDA-DSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (342)
Q Consensus 31 ~~l~~~~~~~p~~~a~~~~-~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 109 (342)
++|.+.++++|+++++... +.++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 4 ~l~~~~a~~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl 83 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPL 83 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHhCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEec
Confidence 4677888899999888732 237899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhhhcCceEEEEcccchhhhhcc----CCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCC
Q 019348 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (342)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (342)
+|.++.+++.+++++++++++|++++....+... ......+... ....+........ ....
T Consensus 84 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~ 148 (503)
T 4fuq_A 84 NTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPD-------------GRGSLTDAAAGAS--EAFA 148 (503)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTT-------------SCSHHHHHHHTSC--SCCC
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCC-------------cccccchhhhcCC--CCcC
Confidence 9999999999999999999999997765443322 2222222211 0011222222211 2223
Q ss_pred CCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEE
Q 019348 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (342)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v 265 (342)
.....++++++|+|||||||.||||+++|+++.+.+.. ....+.+.++|++++.+|++|.+|+...++.++..|++++
T Consensus 149 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~ 226 (503)
T 4fuq_A 149 TIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLT--LVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMI 226 (503)
T ss_dssp CCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHH--HHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEE
T ss_pred cCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHH--HHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEE
Confidence 34566789999999999999999999999999988555 4455667889999999999999997566888999999999
Q ss_pred EccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+.+++++..+++.++ ++|+++++|+++..+++.......+++++|.+++||+++++++.++|++.++ +++++.|
T Consensus 227 ~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~-~~~~~~Y 300 (503)
T 4fuq_A 227 FLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKTG-HAVLERY 300 (503)
T ss_dssp ECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHS-CCEEECC
T ss_pred EcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHhC-CCccceE
Confidence 999999999999998 8999999999999999988777778999999999999999999999999997 8999988
No 25
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.3e-44 Score=331.40 Aligned_cols=300 Identities=20% Similarity=0.267 Sum_probs=234.4
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
+||.++|.++++++||++|+++. ++++||+||.+++.++|+.|++. +||+|+++++|+++++++++||+++|+++
T Consensus 1 mtl~~~l~~~a~~~pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~ 75 (501)
T 3ipl_A 1 MSLDFWLYKQAQQNGHHIAITDG--QESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEI 75 (501)
T ss_dssp --CCCHHHHHHHHHTTSEEEECS--SCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHhcCCceEEEeC--CcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 47788999999999999999987 78999999999999999999886 89999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccC----CCeEEecCCCcccccccccccccc-ccHHHHHhccCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKI-VSFHDLIELSGSV 181 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 181 (342)
+|+++.++.+++.++++.++++++|++.+......... ...+......... ... ...... ...+....... .
T Consensus 76 vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~-~ 152 (501)
T 3ipl_A 76 AMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGL-LDN-TMGIQYDTSNETVVPKES-P 152 (501)
T ss_dssp EECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETTC----------------------------------CC-H
T ss_pred EecCccCCHHHHHHHHHhcCCCEEEEccccccccccccccccceeeeeecccccc-ccc-ccccccccchhhccccCC-c
Confidence 99999999999999999999999999877654332110 0000000000000 000 000000 00000110000 0
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcC
Q 019348 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (342)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G 261 (342)
.........++++++|+|||||||.||||++||+++.+.+.. ....+...++|++++..|++|.+|+ ..++.++..|
T Consensus 153 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G 229 (501)
T 3ipl_A 153 SNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIG--CKESLGFDRDTNWLSVLPIYHISGL-SVLLRAVIEG 229 (501)
T ss_dssp HHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHH--HHHHTCCCTTCEEEECSCTTSHHHH-HHHHHHHHHT
T ss_pred ccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHH--HHHhhCCCccCEEEEeCcHHHHHHH-HHHHHHHHcC
Confidence 001123456789999999999999999999999999988555 4455566889999999999999999 6689999999
Q ss_pred CeEEEccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCccccc
Q 019348 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQK 341 (342)
Q Consensus 262 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~ 341 (342)
+++++.+++++..+++.++++++|++.++|++++.|.+...... .+||.+++||+++++++.+++++. ++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~lr~i~~gG~~l~~~~~~~~~~~--~~~~~~~ 304 (501)
T 3ipl_A 230 FTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP---YNLQKILLGGAKLSATMIETALQY--NLPIYNS 304 (501)
T ss_dssp CEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC---TTCCEEEECSSCCCHHHHHHHHHT--TCCEEEE
T ss_pred ceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc---CcccEEEEeCCCCCHHHHHHHHHh--CCCEecc
Confidence 99999999999999999999999999999999999998764433 289999999999999999999984 5899998
Q ss_pred C
Q 019348 342 I 342 (342)
Q Consensus 342 Y 342 (342)
|
T Consensus 305 Y 305 (501)
T 3ipl_A 305 F 305 (501)
T ss_dssp E
T ss_pred c
Confidence 7
No 26
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1.5e-43 Score=330.67 Aligned_cols=286 Identities=18% Similarity=0.253 Sum_probs=234.0
Q ss_pred CCCCCCCCCCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHH
Q 019348 19 LVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (342)
Q Consensus 19 ~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (342)
.+.+.. .++.++|.+.++++||++|+++. ++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++|
T Consensus 33 ~~~~~~--~~l~~~l~~~a~~~p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 108 (563)
T 1amu_A 33 AEYPRD--KTIHQLFEEQVSKRPNNVAIVCE--NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILA 108 (563)
T ss_dssp CCCCTT--CCHHHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred CCCCCC--CcHHHHHHHHHHHCCCCeEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 334444 69999999999999999999987 78999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCC--eEEecCCCccccccccccccccccHHHHHh
Q 019348 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP--AVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (342)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (342)
|+++|++++|++|.++.+++.+++++++++++|++++........... ...+... . +.
T Consensus 109 ~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~----------------~---~~- 168 (563)
T 1amu_A 109 VLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEED----------------T---IK- 168 (563)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEECCCS----------------T---TT-
T ss_pred HHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccccCceeeecch----------------h---hc-
Confidence 999999999999999999999999999999999998776655443211 1111110 0 00
Q ss_pred ccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHH
Q 019348 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (342)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 256 (342)
... .........++++++|+|||||||.||||++||+++.+.+.. ....+...++|++++..|++|..++ ..++.
T Consensus 169 ~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~ 243 (563)
T 1amu_A 169 IRE--GTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVF--FENSLNVTEKDRIGQFASISFDASV-WEMFM 243 (563)
T ss_dssp TSC--CSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHH--HHHTSCCCTTCEEEECSCTTSTHHH-HHHHH
T ss_pred ccc--CccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHH--HHHhcCCCCCCEEEEeCCccHHHHH-HHHHH
Confidence 000 111122345789999999999999999999999999887544 4445566789999999999999988 67889
Q ss_pred HhhcCCeEEEccC---CCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhC
Q 019348 257 QLQKGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNI 333 (342)
Q Consensus 257 ~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~ 333 (342)
++..|+++++.+. +++..+++.++++++|++.++|+++..+... .+++||.+++||+++++++.++|++.
T Consensus 244 ~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------~~~~lr~~~~gG~~l~~~~~~~~~~~- 316 (563)
T 1amu_A 244 ALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------RILSIQTLITAGSATSPSLVNKWKEK- 316 (563)
T ss_dssp HHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT------TCCSCSEEEEESSCCCHHHHHHHTTT-
T ss_pred HHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc------ccccccEEEEEEecCCHHHHHHHHhC-
Confidence 9999999999875 6899999999999999999999998877432 46789999999999999999999874
Q ss_pred CCCcccccC
Q 019348 334 PGATIFQKI 342 (342)
Q Consensus 334 ~~~~l~~~Y 342 (342)
+++++.|
T Consensus 317 --~~~~~~Y 323 (563)
T 1amu_A 317 --VTYINAY 323 (563)
T ss_dssp --SEEEEEE
T ss_pred --CeEEEEE
Confidence 6777776
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=2.5e-44 Score=338.69 Aligned_cols=299 Identities=20% Similarity=0.244 Sum_probs=243.2
Q ss_pred CCHHHHHhhhcccCCCceEEEeCC--CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 27 FSMVHFLFRNSASYSSKLALIDAD--SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~--~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
.|+.++|.+.++++||++|+++.+ .++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 11 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 90 (590)
T 3kxw_A 11 QSLVDVVRLRALHSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGC 90 (590)
T ss_dssp SSHHHHHHHHHHHCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHhCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCc
Confidence 799999999999999999998643 358999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCC---HHHHHHHhhhcCceEEEEcccchhhhhccCCCeE-EecCCCccccccccccccccccHHHHHhccCC
Q 019348 105 IASTANPVYT---VSELSKQVKDSNPKLVITVPELWDKVKDLNLPAV-LLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (342)
Q Consensus 105 ~~v~l~~~~~---~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (342)
+++|++|..+ .+++.++++.+++++++++.+....+........ ... ...+...+.+.....
T Consensus 91 ~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~- 156 (590)
T 3kxw_A 91 IAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFL-------------KIPAIALESIELNRS- 156 (590)
T ss_dssp EEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEET-------------TEEEEEGGGCCGGGG-
T ss_pred EEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhccccc-------------ccceeechhcccccc-
Confidence 9999999884 5789999999999999999876665543220000 000 000000111110001
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhc
Q 019348 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (342)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~ 260 (342)
.........++++++|+|||||||.||||++||+++.+.+.. ....+.+.++|++++.+|++|.+|+...++.++..
T Consensus 157 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~ 233 (590)
T 3kxw_A 157 -SSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNK--IFTSFHMNDETIIFSWLPPHHDMGLIGCILTPIYG 233 (590)
T ss_dssp -GGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHH--HHHHTTCCTTCEEEECSCTTSHHHHHTTTHHHHHH
T ss_pred -ccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHH--HHHhhCCCCcCeEEEecCCCcchhhHHHHHHHHhc
Confidence 112233556789999999999999999999999999998655 44456678899999999999999995558999999
Q ss_pred CCeEEEccCC----CHHHHHHHHHhccceEEEecHHHHHHHHcCC---CCCccCCCCceEEEeecccCCHHHHHHHHHhC
Q 019348 261 GNCVVSMGKF----DIEMALRAIEKYRVTVWWVVPPIILALAKNS---LVRKFDISSLKLVGSGAAPLGKELMEDCQKNI 333 (342)
Q Consensus 261 G~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~ 333 (342)
|+++++.+++ ++..+++.++++++|++.++|.++..+++.. .....++++||.+++||+++++++.++|++.|
T Consensus 234 G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~ 313 (590)
T 3kxw_A 234 GIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAF 313 (590)
T ss_dssp TCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHHHHHH
T ss_pred CceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHHHHHH
Confidence 9999999865 7999999999999999999999999988753 33456789999999999999999999999988
Q ss_pred C-----CCcccccC
Q 019348 334 P-----GATIFQKI 342 (342)
Q Consensus 334 ~-----~~~l~~~Y 342 (342)
+ +.++++.|
T Consensus 314 ~~~g~~~~~~~~~Y 327 (590)
T 3kxw_A 314 KEFGFRKEAFYPCY 327 (590)
T ss_dssp GGGTCCGGGEEEEE
T ss_pred HHcCCCcccccccc
Confidence 4 34688877
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=1.6e-42 Score=325.70 Aligned_cols=300 Identities=21% Similarity=0.208 Sum_probs=244.9
Q ss_pred CCCCCCCCCCHHHHHhhhcccCCCceEEEeCC-CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHH
Q 019348 19 LVLPSDPSFSMVHFLFRNSASYSSKLALIDAD-SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (342)
Q Consensus 19 ~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~-~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 97 (342)
.+.+.. .|+.++|.+.++++|+.+++.+.. .++++||+||.++++++|+.|++.|+++||+|+++++|+++++++++
T Consensus 15 ~~~~~~--~tl~~~l~~~a~~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 92 (576)
T 3gqw_A 15 MRYADF--PTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFF 92 (576)
T ss_dssp CCCSCC--SSHHHHHHHHTTSSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHH
T ss_pred cccCCC--CcHHHHHHHHhhCCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 334444 799999999999999988886543 24899999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeEeccCCCCC-------HHHHHHHhhhcCceEEEEcccchhhhhccCC---CeEEecCCCccccccccccccc
Q 019348 98 GVIAIGAIASTANPVYT-------VSELSKQVKDSNPKLVITVPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSK 167 (342)
Q Consensus 98 A~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 167 (342)
||+++|++++|+++.++ .+++.++++.+++++++++++....+..... ....+
T Consensus 93 A~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~----------------- 155 (576)
T 3gqw_A 93 ACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPELHVL----------------- 155 (576)
T ss_dssp HHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTCEEE-----------------
T ss_pred HHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcceec-----------------
Confidence 99999999999999998 7899999999999999999887665543211 01111
Q ss_pred cccHHHHHhccCCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHH
Q 019348 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHV 247 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 247 (342)
.......... .........++++++|+|||||||.||||+++|+++.+.+.... ...+.+.++|++++.+|++|.
T Consensus 156 --~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~-~~~~~~~~~d~~l~~~p~~h~ 230 (576)
T 3gqw_A 156 --SHAWFKALPE--ADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAIS-HDGIKLRPGDRCVSWLPFYHD 230 (576)
T ss_dssp --EHHHHHTSCC--CCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHH-HTTSCCCTTCCEEECCCTTSH
T ss_pred --chhhhhcccc--cccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhh-hcccCCCCcceEEEcCCcccc
Confidence 0011111111 22223345678999999999999999999999999988755422 122556789999999999999
Q ss_pred HHHHHHHHHHhhcCCeEEEccC----CCHHHHHHHHHhccceEEEecHHHHHHHHcCCC---CCccCCCCceEEEeeccc
Q 019348 248 FGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL---VRKFDISSLKLVGSGAAP 320 (342)
Q Consensus 248 ~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~---~~~~~l~~lr~~~~gG~~ 320 (342)
+|+...++.++..|+++++.+. +++..+++.++++++|+++++|.+++.+.+... ....++++||.+++||++
T Consensus 231 ~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~ 310 (576)
T 3gqw_A 231 MGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEP 310 (576)
T ss_dssp HHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSC
T ss_pred ccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCcc
Confidence 9996678889999999998864 588999999999999999999999988876543 234568999999999999
Q ss_pred CCHHHHHHHHHhCC-----CCcccccC
Q 019348 321 LGKELMEDCQKNIP-----GATIFQKI 342 (342)
Q Consensus 321 l~~~~~~~~~~~~~-----~~~l~~~Y 342 (342)
+++++.++|++.|+ ++++++.|
T Consensus 311 l~~~~~~~~~~~~~~~~~~~~~~~~~Y 337 (576)
T 3gqw_A 311 ISAEQLHQFAECFRQVNFDNKTFMPCY 337 (576)
T ss_dssp CCHHHHHHHHHHHGGGTCCGGGEEEEE
T ss_pred CCHHHHHHHHHHHhhcCCCcccccccC
Confidence 99999999999884 57888877
No 29
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=3.1e-42 Score=322.48 Aligned_cols=292 Identities=16% Similarity=0.148 Sum_probs=234.1
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCC--------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHH
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADS--------DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~--------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (342)
+|+.++|.+.++++||++|+++.+. ++++||+||.++++++|+.|.+.|+ +||+|+++++|+++++++++|
T Consensus 20 ~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~~~lA 98 (562)
T 3ite_A 20 VPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAIIVG 98 (562)
T ss_dssp CCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHHHHHH
Confidence 8999999999999999999987531 2789999999999999999999999 799999999999999999999
Q ss_pred HHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhcc
Q 019348 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS 178 (342)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (342)
|+++|++++|++|.++.+++.+++++++++++|++++.......... ...+... ...+.+.....
T Consensus 99 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~ 163 (562)
T 3ite_A 99 IMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVELPPE-TKVLDTK--------------NQSFIENLSTQ 163 (562)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCCCCTT-CEEEETT--------------CHHHHHHHHHS
T ss_pred HHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEccccccccccCcc-ceeeccc--------------chhhhhhcccc
Confidence 99999999999999999999999999999999998765443321111 1111111 11223333222
Q ss_pred CCCCCCCCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhh------hccccCCCeEEEEccchhHHHHHHH
Q 019348 179 GSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAH------QELVGELDHVVLCVLPMFHVFGLSV 252 (342)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~------~~~~~~~~d~~~~~~p~~~~~g~~~ 252 (342)
. .........++++++|+|||||||.||||++||+++.+.+...... ........+++++..|++|..++ .
T Consensus 164 ~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (562)
T 3ite_A 164 D--TSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHI-G 240 (562)
T ss_dssp C--CSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHH-H
T ss_pred c--ccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhH-H
Confidence 2 2222234456889999999999999999999999998875543221 12335678999999999998887 7
Q ss_pred HHHHHhhcCCeEEEccCCC-HHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHH
Q 019348 253 ILYDQLQKGNCVVSMGKFD-IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQK 331 (342)
Q Consensus 253 ~~~~~l~~G~~~v~~~~~~-~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~ 331 (342)
.++.++..|+++++.+.+. +..+++.++++++|++.++|++++.+... ..++++||.+++||+++++++.++|++
T Consensus 241 ~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~----~~~~~~lr~~~~gG~~l~~~~~~~~~~ 316 (562)
T 3ite_A 241 EMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV----PEDAPHLVYLGVGGEKMTPRTQQIWSS 316 (562)
T ss_dssp HHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC----GGGSTTCCEEEEESSCCCHHHHHHHTT
T ss_pred HHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC----ccccCceEEEEEecCCCCHHHHHHHhh
Confidence 7889999999999987653 57788999999999999999999887544 356889999999999999999999999
Q ss_pred hCCCCcccccC
Q 019348 332 NIPGATIFQKI 342 (342)
Q Consensus 332 ~~~~~~l~~~Y 342 (342)
.++ +++++.|
T Consensus 317 ~~~-~~~~~~Y 326 (562)
T 3ite_A 317 SDR-VALVNVY 326 (562)
T ss_dssp CSS-CEEEEEE
T ss_pred CCC-cEEEEee
Confidence 876 8999887
No 30
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=8.8e-42 Score=345.95 Aligned_cols=285 Identities=17% Similarity=0.225 Sum_probs=242.1
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeE
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (342)
.++.++|.+.++++||++|+++. ++++||+||.++++++|+.|++.|+++|++|+|+++|+.+++++++||+++|+++
T Consensus 464 ~~l~~~~~~~~~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~~ 541 (1304)
T 2vsq_A 464 KPLTYWFKEAVNANPDAPALTYS--GQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAY 541 (1304)
T ss_dssp CCHHHHHHHHHHHCTTSEEEESS--SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHhCCCCeEEEEC--CeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 68999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCC--eEEecCCCccccccccccccccccHHHHHhccCCCCCC
Q 019348 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP--AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (342)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (342)
+|++|.++.+++.++++++++++++++.+.......+... .+.++.. .... .. ...
T Consensus 542 vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--~~--~~~ 599 (1304)
T 2vsq_A 542 LPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQ------------------TRFE--EQ--ASD 599 (1304)
T ss_dssp EECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCCCCSEEEESSCG------------------GGGG--SC--SSC
T ss_pred EEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccCCCCcEEEeccc------------------cccc--cc--cCC
Confidence 9999999999999999999999999998765544333211 1111110 0000 01 111
Q ss_pred CCCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeE
Q 019348 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 264 (342)
Q Consensus 185 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 264 (342)
......++++++|+|||||||+||||+++|+++.+.. +....+.+..+|+++...|++|..+. ..++.+|..|+++
T Consensus 600 ~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~~---~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l 675 (1304)
T 2vsq_A 600 PATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGLV---KHVDYMAFSDQDTFLSVSNYAFDAFT-FDFYASMLNAARL 675 (1304)
T ss_dssp CCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHH---SSCCSSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEE
T ss_pred CCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHHH---HHHHhcCCCCCCEEEEECCccHHHHH-HHHHHHHHcCCEE
Confidence 2234567899999999999999999999999998652 23445566789999999999998887 7899999999999
Q ss_pred EEccC---CCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCccccc
Q 019348 265 VSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQK 341 (342)
Q Consensus 265 v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~ 341 (342)
++.+. +++..+++.++++++|+++++|++++.+.+.. ...+++||.+++|||++++++.++|.+.+++.+++|.
T Consensus 676 ~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 752 (1304)
T 2vsq_A 676 IIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMKGLRCILFGGERASVPHVRKALRIMGPGKLINC 752 (1304)
T ss_dssp EECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEE
T ss_pred EECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEe
Confidence 99864 68999999999999999999999999998653 2346789999999999999999999999887899998
Q ss_pred C
Q 019348 342 I 342 (342)
Q Consensus 342 Y 342 (342)
|
T Consensus 753 Y 753 (1304)
T 2vsq_A 753 Y 753 (1304)
T ss_dssp E
T ss_pred E
Confidence 8
No 31
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=2.6e-42 Score=318.48 Aligned_cols=279 Identities=21% Similarity=0.285 Sum_probs=229.9
Q ss_pred CCHHHHHhhhcccCCC-ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCe
Q 019348 27 FSMVHFLFRNSASYSS-KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~-~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (342)
.++.+.|.+.++++|+ ++|+++. ++++||+||.++++++|..|. .|++|+++++|+++++++++||+++|++
T Consensus 22 ~tl~~~l~~~a~~~p~d~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga~ 94 (505)
T 3nyq_A 22 SSLFPALSPAPTGAPADRPALRFG--ERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGVA 94 (505)
T ss_dssp --CCTTTSSCCCSGGGGSEEEEET--TEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTCC
T ss_pred chhHHHHHHHHHhCCCCCeEEEEC--CeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 5789999999999997 9999998 889999999999999999885 3789999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecCCCccccccccccccccccHHHHHhccCCCCCCC
Q 019348 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (342)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (342)
++|++|.++.+++.+++++++++++|++.+............+.++.. .. ....
T Consensus 95 ~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~------------------------~~--~~~~ 148 (505)
T 3nyq_A 95 AVPLNPKSGDKELAHILSDSAPSLVLAPPDAELPPALGALERVDVDVR------------------------AR--GAVP 148 (505)
T ss_dssp EEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCCGGGTTSEEEECCTT------------------------CC--CCCC
T ss_pred EEEcCCCCCHHHHHHHHHHCCCCEEEECCccccchhhccccccccccc------------------------cc--cCCC
Confidence 999999999999999999999999999865211100001111111100 00 1112
Q ss_pred CCCCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEE
Q 019348 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (342)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v 265 (342)
.....++++++|+|||||||.||||+++|+++.+.+.. ....+...++|++++.+|++|..|+...++.++..|++++
T Consensus 149 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (505)
T 3nyq_A 149 EDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDA--LADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVR 226 (505)
T ss_dssp CCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHH--HHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEE
T ss_pred CCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHH--HHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEE
Confidence 23456789999999999999999999999999988655 4445566889999999999999998667999999999999
Q ss_pred EccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCC---CccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV---RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+.+++++..+++.+ ++++|+++++|+++..+++.... ....++++|.+++||+++++++.+++++.++ +++++.|
T Consensus 227 ~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~-~~~~~~Y 304 (505)
T 3nyq_A 227 HLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAATG-RRVIERY 304 (505)
T ss_dssp ECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHHS-CCCEEEE
T ss_pred ECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhcC-Ceeeccc
Confidence 99999999999999 88999999999999999874322 1245788999999999999999999999987 8999987
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.91 E-value=3.8e-25 Score=194.71 Aligned_cols=144 Identities=19% Similarity=0.205 Sum_probs=125.6
Q ss_pred CCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEEccCC
Q 019348 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKF 270 (342)
Q Consensus 191 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~ 270 (342)
.+++++|+|||||||.||||++||+++.+.+.. ....+.+.++|++++.+|++|++|+ ..++.++..|+++++.++.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~--~~~~~~~~~~d~~l~~~pl~h~~gl-~~~~~~l~~g~~~~~~~~~ 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAM--TGKALSLGPGTRALVCLNVGYIAGL-MMLVRGMELDWELTVTEPT 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHH--HHHHTTCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEEECCC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHH--HHHHhCCCCCCEEEEECChHHHHHH-HHHHHHHHhCcEEEecCcc
Confidence 478999999999999999999999999988655 4555667889999999999999999 7788899999999988642
Q ss_pred CHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 271 DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 271 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
...++.++++++|++.++|++++.|++... ...++++||.+++||+++++++.+++++. ++++++.|
T Consensus 113 --~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~-~~~~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~Y 179 (358)
T 4gs5_A 113 --ANPLAGLDHADFDFVAMVPMQLQSILENSA-TSGQVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSY 179 (358)
T ss_dssp --SCTTTTCSSCCCSEEEECHHHHHHHHHCTT-TGGGGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEE
T ss_pred --ccHHHHHHHhCCeEEEcChHHHHHhhcccc-ccccCCcceEEEEcccCCCchheeccccc--CceEEecc
Confidence 234677899999999999999999998764 34578999999999999999999999885 58999987
No 33
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.88 E-value=4.7e-23 Score=182.58 Aligned_cols=152 Identities=18% Similarity=0.151 Sum_probs=127.4
Q ss_pred CCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhh-hhhccccCCCeEEEEccch-hHHHHHHHHHHHHhhcCCeEEE
Q 019348 189 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVVLCVLPM-FHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
..++++++|+|||||||.||+|+++|+++...+.... .........+|++++..|+ +|..|+ ...+.++..|+ +++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~-~~~~~~~~~G~-~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGA-INKERALRLGG-MFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHH-HHHHHHHHTTS-CEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhH-HHHHHHHHcCC-EEE
Confidence 4678899999999999999999999999998755321 2233445788999999999 999998 66677799999 777
Q ss_pred ccCCCHH-----------------------HHHHHHHhccceEEEecHHHHHHHHcCCCCCccCCCCceEEEeecccCCH
Q 019348 267 MGKFDIE-----------------------MALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGK 323 (342)
Q Consensus 267 ~~~~~~~-----------------------~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gG~~l~~ 323 (342)
+.+++|. .+++.++++++|++.++|+++..|++.......++++||.+++||+++++
T Consensus 166 ~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~ 245 (369)
T 3hgu_A 166 SIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNL 245 (369)
T ss_dssp CCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCH
T ss_pred CccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCH
Confidence 7778888 88889999999999999999999998854444567899999999999999
Q ss_pred HHHHHHH-HhCCCCcccccC
Q 019348 324 ELMEDCQ-KNIPGATIFQKI 342 (342)
Q Consensus 324 ~~~~~~~-~~~~~~~l~~~Y 342 (342)
++.++++ +.||++++++.|
T Consensus 246 ~~~~~~~~~~~p~~~v~~~Y 265 (369)
T 3hgu_A 246 DEIKFIASEILPDCEFSASY 265 (369)
T ss_dssp HHHHHHHHHTCTTSEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEccc
Confidence 9999999 999779999988
No 34
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.88 E-value=1.4e-22 Score=183.60 Aligned_cols=154 Identities=16% Similarity=0.140 Sum_probs=131.6
Q ss_pred CCCC-CCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhh-hhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEE
Q 019348 188 SVKQ-TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (342)
Q Consensus 188 ~~~~-~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v 265 (342)
...+ +++++|+|||||||.||+|++||+++.+.+..... .......++|++++..|+.|..+.+..++.++..|++++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 160 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTV 160 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEE
Confidence 3445 88999999999999999999999999776544321 223456788999999998766666577889999999999
Q ss_pred EccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccC--CCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~--l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+.+.+++..+++.|+++++|+++++|+++..|++.......+ +++||.+++||+++++++.+++++.|+ +++++.|
T Consensus 161 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~~Y 238 (436)
T 3qov_A 161 PAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERMLN-VKAYNSF 238 (436)
T ss_dssp CCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHHT-SEEEEEE
T ss_pred eCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHhC-ccEEecC
Confidence 998899999999999999999999999999998875444433 789999999999999999999999996 9999988
No 35
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.87 E-value=5.3e-22 Score=179.79 Aligned_cols=153 Identities=20% Similarity=0.217 Sum_probs=130.0
Q ss_pred CCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhh-hhhccccCCCeEEEEccch-hHHHHHHHHHHHHhhcCCeEE
Q 019348 188 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVVLCVLPM-FHVFGLSVILYDQLQKGNCVV 265 (342)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~v 265 (342)
...++++++|+|||||||.||+|++||+++...+.... ....+....+|++++..|+ +|..++ ..++.++..|++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~ 164 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGL-GAHYGAERAGLTVI 164 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHTTCEEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccch-HHHHHHHHcCCEEE
Confidence 34668999999999999999999999999887644322 1223556788999999998 788777 67889999999999
Q ss_pred EccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCccC--CCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~--l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+.+.+++..+++.|+++++|+++++|+++..|++.......+ ++++|.+++||+++++++.+++++.|+ +++++.|
T Consensus 165 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~~Y 242 (437)
T 2y27_A 165 PFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMG-IDAVDIY 242 (437)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHT-SEEEEEE
T ss_pred eCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHHC-cCEEecC
Confidence 988889999999999999999999999999998765333332 579999999999999999999999986 9999987
No 36
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.86 E-value=9.4e-22 Score=178.48 Aligned_cols=153 Identities=21% Similarity=0.219 Sum_probs=129.7
Q ss_pred CCCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhh-hhccccCCCeEEEEccch-hHHHHHHHHHHHHhhcCCeEE
Q 019348 188 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPM-FHVFGLSVILYDQLQKGNCVV 265 (342)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~v 265 (342)
...++++++++|||||||.||+|++||+++...+..... ...+...++|++++..|+ +|..++ ...+.++..|++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~G~~~~ 166 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGL-GIHYGAERLGCMVV 166 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHHTCEEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHH-HHHHHHHHcCCEEE
Confidence 346688999999999999999999999998876443221 223556788999999998 577776 67889999999999
Q ss_pred EccCCCHHHHHHHHHhccceEEEecHHHHHHHHcCCCCCcc--CCCCceEEEeecccCCHHHHHHHHHhCCCCcccccC
Q 019348 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKF--DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQKI 342 (342)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~--~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~Y 342 (342)
+.+.+++..+++.|+++++|+++++|+++..|++....... .+++||.+++||+++++++.+++++.|+ +++++.|
T Consensus 167 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~~Y 244 (443)
T 2y4o_A 167 PMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRVG-IDALDIY 244 (443)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred ECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHhC-cCEEecc
Confidence 99888999999999999999999999999999876533333 3589999999999999999999999996 9999987
No 37
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=94.53 E-value=0.25 Score=43.86 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=69.5
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC--hHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEE
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (342)
-.+|.+.+...+..++..+...|+.++|++....+.+. ..+...++++..|+..++++.. ..+.+.+.+++.++.++
T Consensus 108 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l 186 (437)
T 2y27_A 108 VGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGG-QTEKQVQLIQDFRPDII 186 (437)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCSC-CHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHhCCCEE
Confidence 46789999888888888887889999999998888642 2344568889999998877654 78889999999999999
Q ss_pred EEcccchhhh
Q 019348 131 ITVPELWDKV 140 (342)
Q Consensus 131 i~~~~~~~~~ 140 (342)
+..+.....+
T Consensus 187 ~~~Ps~~~~l 196 (437)
T 2y27_A 187 MVTPSYMLSI 196 (437)
T ss_dssp EECHHHHHHH
T ss_pred EECHHHHHHH
Confidence 9887665543
No 38
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=93.90 E-value=0.36 Score=42.93 Aligned_cols=87 Identities=11% Similarity=0.111 Sum_probs=69.8
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC--hHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEE
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (342)
-.+|.+.+...+..++..+...|+.++|++....+-+. ..+...++++..|+..+++++. ..+.+.+.+++.++.++
T Consensus 110 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l 188 (443)
T 2y4o_A 110 VGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKII 188 (443)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEE
Confidence 36789999888888888888889999999998888643 3345568888999998887664 77888999999999999
Q ss_pred EEcccchhhh
Q 019348 131 ITVPELWDKV 140 (342)
Q Consensus 131 i~~~~~~~~~ 140 (342)
+..+.....+
T Consensus 189 ~~~Ps~~~~l 198 (443)
T 2y4o_A 189 LVTPSYMLNL 198 (443)
T ss_dssp EECHHHHHHH
T ss_pred EECHHHHHHH
Confidence 9887665543
No 39
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=93.55 E-value=0.42 Score=42.42 Aligned_cols=98 Identities=16% Similarity=0.087 Sum_probs=75.6
Q ss_pred CceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC--hHHHHHHHHHHhCCeEeccCCC
Q 019348 42 SKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPV 112 (342)
Q Consensus 42 ~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~ 112 (342)
+.++.+...+| -.+|.+.+...+..+++.+...|+.++|++....+-+. ..+..+++++..|+..++.++.
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~ 165 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG 165 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC
Confidence 56665533322 46899999988888888888889999999998887542 3345678889999998887654
Q ss_pred CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 113 YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 113 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
..+.+.+.+++.++.+++..+.....+
T Consensus 166 -~~~~~~~~i~~~~~t~~~~~P~~~~~l 192 (436)
T 3qov_A 166 -NSKRQIKFISDFKTTALHAIPSYAIRL 192 (436)
T ss_dssp -CHHHHHHHHHHHTCCEEECCHHHHHHH
T ss_pred -CHHHHHHHHHHHCCCEEEECHHHHHHH
Confidence 678889999999999999887765544
No 40
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=88.40 E-value=1.6 Score=37.53 Aligned_cols=86 Identities=9% Similarity=0.126 Sum_probs=62.8
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCh--HHHHHHHHHHhCCeEeccCCCCCHH--------------
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVS-------------- 116 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~-------------- 116 (342)
-.+|.+.+...+..++..+...|+.++|++....|-+.. .+...++++..|+.+++.+ ..+.
T Consensus 109 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~--~dp~~~~~~~~~~~~~~~ 186 (369)
T 3hgu_A 109 VVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID--IDPRWVKRSLSEGDTATV 186 (369)
T ss_dssp EEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC--CCHHHHHHHHHTTCHHHH
T ss_pred EEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc--CChHHHHHhhcccchhhh
Confidence 467888888888877777888899999999998887322 2344455588898655543 3333
Q ss_pred ---------HHHHHhhhcCceEEEEcccchhhh
Q 019348 117 ---------ELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 117 ---------~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
++.+.+++.++.+++..+.....+
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l 219 (369)
T 3hgu_A 187 RKYTHHLVDQVQNTLMNQDIRFLVTTPPVLREL 219 (369)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 666689999999999887666554
No 41
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=88.14 E-value=3.1 Score=38.06 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=71.3
Q ss_pred CceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH--HHHHHHHhCCeEeccCCC
Q 019348 42 SKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTANPV 112 (342)
Q Consensus 42 ~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~~~ 112 (342)
+.++++...+| -.+|.+.+...+......+...++.++|+++...|-...+-. .+++.+ .|+..+..+ .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 77787754323 468999887776665544333678899999888887655433 356667 998888775 5
Q ss_pred CCHHHHHHHhhhcCceEEEEcccchhhhh
Q 019348 113 YTVSELSKQVKDSNPKLVITVPELWDKVK 141 (342)
Q Consensus 113 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (342)
...+.+.+.+++.++.+++..+.....+.
T Consensus 270 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 298 (548)
T 2d1s_A 270 FDEETFLKTLQDYKCTSVILVPTLFAILN 298 (548)
T ss_dssp CCHHHHHHHHHHTTEEEEEECHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 67888999999999999998877666543
No 42
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=86.90 E-value=7.6 Score=35.34 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=71.4
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH---HHHHHHHhCCeEecc
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTA 109 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~---~~lA~~~~G~~~v~l 109 (342)
.|+.+|++...+| -.+|.+.+...+...... .++.++|++....|-+..+-. .+++++..|+..+..
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 180 KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEV---CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHh---hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 4677777644322 468998887776655443 478899999888887765543 478889999988876
Q ss_pred CCCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
+ ....+.+...+++.++.++...+.....+
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (539)
T 1mdb_A 257 P-SPSPDDAFPLIEREKVTITALVPPLAMVW 286 (539)
T ss_dssp S-SSSHHHHHHHHHHHTCSEEEECHHHHHHH
T ss_pred C-CCCHHHHHHHHHHcCCeEEEccHHHHHHH
Confidence 5 46788899999999999999887665543
No 43
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=86.47 E-value=8.1 Score=35.19 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=71.2
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH---HHHHHHHhCCeEecc
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTA 109 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~---~~lA~~~~G~~~v~l 109 (342)
.++.+|++...+| -.+|.+.+...+...+.. .++.++|++....|-...+-. .+++.+..|+..+..
T Consensus 189 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 265 (544)
T 3o83_A 189 PADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMA 265 (544)
T ss_dssp CTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEEC
Confidence 4577777644322 468999888777666554 488999999998887766544 368888899988776
Q ss_pred CCCCCHHHHHHHhhhcCceEEEEcccchhh
Q 019348 110 NPVYTVSELSKQVKDSNPKLVITVPELWDK 139 (342)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 139 (342)
+ ......+...+++.++..+...+.....
T Consensus 266 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 294 (544)
T 3o83_A 266 P-NPEPLNCFSIIQRHQVNMASLVPSAVIM 294 (544)
T ss_dssp S-SCCHHHHHHHHHHHTCCEEEECHHHHHH
T ss_pred C-CCCHHHHHHHHHHHCCCEEEechHHHHH
Confidence 5 4577888899999999999887765544
No 44
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=84.55 E-value=9.6 Score=34.46 Aligned_cols=96 Identities=10% Similarity=0.109 Sum_probs=69.2
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHH--HHHHHHhCCeEeccC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPIC--FLGVIAIGAIASTAN 110 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~--~lA~~~~G~~~v~l~ 110 (342)
.|+.++++...+| -.+|.+.+...+...+..+ ++.++|+++..+|-...+-.. +++++ .|+..+..
T Consensus 168 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~- 242 (517)
T 3r44_A 168 GGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTI---DVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISM- 242 (517)
T ss_dssp CTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHS---CCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEEC-
T ss_pred CCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhc---CCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEe-
Confidence 3566776533222 5789998887776665544 889999999988877655443 44444 88887766
Q ss_pred CCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
+....+.+...+++.++.++...+.....+
T Consensus 243 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 272 (517)
T 3r44_A 243 PQFDATKVWSLIVEERVCIGGAVPAILNFM 272 (517)
T ss_dssp SSCCHHHHHHHHHHTTCCEEEECHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCeEEEeHHHHHHHH
Confidence 457888899999999999999887766544
No 45
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=83.48 E-value=11 Score=33.91 Aligned_cols=99 Identities=15% Similarity=0.150 Sum_probs=73.3
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 111 (342)
.++.+|++...+| -.+|.+.+...+...... .++.++|+++...|-...+ +..+++++..|+..+..+
T Consensus 161 ~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 236 (501)
T 3ipl_A 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKES---LGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD- 236 (501)
T ss_dssp CTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHH---TCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHh---hCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-
Confidence 5677887644323 468998888776665544 4888999999888876543 234677888999888765
Q ss_pred CCCHHHHHHHhhhcCceEEEEcccchhhhhc
Q 019348 112 VYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (342)
Q Consensus 112 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 142 (342)
....+.+.+.+++.++.++...+.....+..
T Consensus 237 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 267 (501)
T 3ipl_A 237 KFNAEQILTMIKNERITHISLVPQTLNWLMQ 267 (501)
T ss_dssp SCCHHHHHHHHHHSCCCEEEECHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEchHHHHHHHHh
Confidence 4678899999999999999998777665543
No 46
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=82.33 E-value=16 Score=28.73 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=55.8
Q ss_pred eEEEEccch-hHHHHHHHHHHHHhhcCCeEEEc-cCCCHHHHHHHHHhccceEEEe------cHHH--HHHHHcCCCCCc
Q 019348 236 HVVLCVLPM-FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWV------VPPI--ILALAKNSLVRK 305 (342)
Q Consensus 236 d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~------~P~~--l~~l~~~~~~~~ 305 (342)
.+++...+- .|..|....-..--..|..++.. ....++.+.+.++++++.++.+ ++++ ++.+++......
T Consensus 94 ~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~ 173 (215)
T 3ezx_A 94 LAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEK 173 (215)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTT
T ss_pred eEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcC
Confidence 344443333 67788755555556678777765 4568899999999999998777 2222 233332221111
Q ss_pred cCCCCceEEEeecccCCHHHHHHH
Q 019348 306 FDISSLKLVGSGAAPLGKELMEDC 329 (342)
Q Consensus 306 ~~l~~lr~~~~gG~~l~~~~~~~~ 329 (342)
. ...++ +++||.+++++..+++
T Consensus 174 ~-~~~v~-v~vGG~~~~~~~a~~i 195 (215)
T 3ezx_A 174 L-RDSVK-CMFGGAPVSDKWIEEI 195 (215)
T ss_dssp C-GGGSE-EEEESSSCCHHHHHHH
T ss_pred C-CCCCE-EEEECCCCCHHHHHHh
Confidence 1 01343 7889999998765543
No 47
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=81.40 E-value=6.9 Score=35.28 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=71.1
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 111 (342)
.++.++++...+| -.+|.+.+...+..... ..++.++|+++...|-+..+ +..+++++..|+..+.+++
T Consensus 142 ~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 218 (512)
T 3fce_A 142 KGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDK 218 (512)
T ss_dssp CTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCH
Confidence 3566776533222 46899888776655544 34789999999988876543 3457888999998887765
Q ss_pred C--CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
. ..++.+...+++.++.++...+.....+
T Consensus 219 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 249 (512)
T 3fce_A 219 DMIARPKDLFASLEQSDIQVWTSTPSFAEMC 249 (512)
T ss_dssp HHHHSHHHHHHHHHHHCCCEEEECHHHHHHH
T ss_pred HHhhCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 3 4677888999999999998887666543
No 48
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=81.13 E-value=8.1 Score=35.25 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=69.8
Q ss_pred CCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCCC
Q 019348 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV 112 (342)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~ 112 (342)
++.+|++...+| -.+|.+.+...+......+...++.++|+++...|-...+ +...++.+..|+..+..+ .
T Consensus 189 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 267 (550)
T 3rix_A 189 DKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY-R 267 (550)
T ss_dssp TTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-S
T ss_pred CCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC-C
Confidence 356676543322 4688888776655544444345788999998888877543 345667788999888774 5
Q ss_pred CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 113 YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 113 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
..++.+...+++.++.+++..+.....+
T Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l 295 (550)
T 3rix_A 268 FEEELFLRSLQDYKIQSALLVPTLFSFF 295 (550)
T ss_dssp CCHHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred CCHHHHHHHHHHcCCeEEEeCcHHHHHH
Confidence 6788899999999999999887766544
No 49
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=80.05 E-value=9.2 Score=34.46 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=70.2
Q ss_pred CCCceEEEeCC---CC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH-HHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDAD---SD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~---~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~ 111 (342)
.++.++++... +| -.+|.+.+...+..+... .++..+|+++...|-+..+- ..+++++..|+..+..+.
T Consensus 141 ~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 217 (511)
T 3e7w_A 141 KEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICAD---FPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTK 217 (511)
T ss_dssp CTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHH---STTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---cCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcCh
Confidence 35666665332 22 468888887766655444 47888999999888775443 457888899998887754
Q ss_pred C--CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
. ..++.+.+.+++.++.+++..+.....+
T Consensus 218 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 248 (511)
T 3e7w_A 218 DAVNKPKVLFEELKKSGLNVWTSTPSFVQMC 248 (511)
T ss_dssp HHHHSHHHHHHHHHHHCCSEEEECHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 3 4667788899999999998887766554
No 50
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=79.33 E-value=9.4 Score=35.08 Aligned_cols=96 Identities=16% Similarity=0.207 Sum_probs=70.3
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH--HHHHHHHhCCeEeccC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTAN 110 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~ 110 (342)
.|+.++++...+| -.+|.+.+...+...... .++.++|+++...|-...+-. .+++.+..|+..+..+
T Consensus 165 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 241 (590)
T 3kxw_A 165 KSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTS---FHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMS 241 (590)
T ss_dssp CTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECC
T ss_pred CCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHh---hCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeC
Confidence 4677777644322 468999988877666554 478899999999888876543 3688899999888776
Q ss_pred CCC---CHHHHHHHhhhcCceEEEEcccchh
Q 019348 111 PVY---TVSELSKQVKDSNPKLVITVPELWD 138 (342)
Q Consensus 111 ~~~---~~~~l~~~l~~~~~~~vi~~~~~~~ 138 (342)
+.. .+..+...+++.++.++...+....
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 272 (590)
T 3kxw_A 242 PFSFLQNPLSWLKHITKYKATISGSPNFAYD 272 (590)
T ss_dssp HHHHHHCTHHHHHHHHHHTCSEEEECTHHHH
T ss_pred HHHHHHCHHHHHHHHHHhCCeeecCChhHHH
Confidence 542 5667888899999998887655443
No 51
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=79.08 E-value=26 Score=32.47 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=69.7
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH---HHHHHHHhCCeEecc
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTA 109 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~---~~lA~~~~G~~~v~l 109 (342)
.|+.+|++...+| -.+|.+.+...+...... .++.++|++....|-+..+-. .+++++..|+..+..
T Consensus 182 ~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~ 258 (617)
T 3rg2_A 182 PADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLA 258 (617)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEe
Confidence 3577777643322 568898887776665544 478899999998887665544 368888889888776
Q ss_pred CCCCCHHHHHHHhhhcCceEEEEcccchhh
Q 019348 110 NPVYTVSELSKQVKDSNPKLVITVPELWDK 139 (342)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 139 (342)
+. .....+...+++.++.++...+.....
T Consensus 259 ~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~ 287 (617)
T 3rg2_A 259 AD-PSATLCFPLIEKHQVNVTALVPPAVSL 287 (617)
T ss_dssp SS-CCHHHHHHHHHHTTCCEEEECHHHHHH
T ss_pred CC-CCHHHHHHHHHHhCCcEEEcchHHHHH
Confidence 54 567788889999999999887765544
No 52
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=78.55 E-value=10 Score=34.11 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=69.8
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCC--CCCCEEEEECCCCChHH--HHHHHHHHhCCeEec
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGI--TKKDVVLIFAPNSIHFP--ICFLGVIAIGAIAST 108 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~--~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~ 108 (342)
.|+.+|++...+| -.+|.+.+...+..+.. ..++ .++|+++..+|-...+- ..+++.+..|+..+.
T Consensus 151 ~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 227 (504)
T 1t5h_X 151 EPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMST---QVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVV 227 (504)
T ss_dssp CTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHH---TTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEE
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHH---hhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEe
Confidence 4677777644322 46788887766555443 3466 78898888888766553 346888899998887
Q ss_pred cCCCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 109 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
.+. ..+..+.+.+++.++.+++..+.....+
T Consensus 228 ~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l 258 (504)
T 1t5h_X 228 VEE-FRPVDALQLVQQEQVTSLFATPTHLDAL 258 (504)
T ss_dssp CSS-CCHHHHHHHHHHHTCCEEECCHHHHHHH
T ss_pred CCC-CCHHHHHHHHHHhCCeEEEeChHHHHHH
Confidence 754 6778889999999999999887666544
No 53
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=77.58 E-value=18 Score=33.09 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=68.8
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH--HHHHHHHhCCeEeccC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTAN 110 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~ 110 (342)
.++.+|++...+| -.+|.+ +....... .....++.++|++....+-+..+-. .+++.+..|+..+..+
T Consensus 204 ~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 280 (570)
T 3c5e_A 204 GSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKM--DAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHL 280 (570)
T ss_dssp BTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHH--HTTTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEEC
T ss_pred CCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhh--hhhhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEec
Confidence 4577777644322 467877 43311111 1245688999999888887765443 4678888898877765
Q ss_pred C-CCCHHHHHHHhhhcCceEEEEcccchhhhhc
Q 019348 111 P-VYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (342)
Q Consensus 111 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 142 (342)
. ...++.+...+++.++.+++..+.....+..
T Consensus 281 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 313 (570)
T 3c5e_A 281 LPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQ 313 (570)
T ss_dssp CSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHh
Confidence 3 6788899999999999999988777665543
No 54
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=77.00 E-value=16 Score=31.14 Aligned_cols=94 Identities=7% Similarity=0.098 Sum_probs=63.0
Q ss_pred CCceEEE---eCCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCCC
Q 019348 41 SSKLALI---DADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV 112 (342)
Q Consensus 41 p~~~a~~---~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~ 112 (342)
.|.+|++ .+.++ -.+|.+.+...+..++.. .++.++|+++..+|-...+ +..++..+..|+..+..++.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~ 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKA---LSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPT 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHH---hCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcc
Confidence 3455554 44444 578999988776665554 4889999999888876543 33455667778777766654
Q ss_pred CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 113 YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 113 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
.. ....+++.++..+...+.....+
T Consensus 113 ~~---~~~~i~~~~~t~~~~~P~~l~~l 137 (358)
T 4gs5_A 113 AN---PLAGLDHADFDFVAMVPMQLQSI 137 (358)
T ss_dssp SC---TTTTCSSCCCSEEEECHHHHHHH
T ss_pred cc---HHHHHHHhCCeEEEcChHHHHHh
Confidence 32 34567888899888876655544
No 55
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=75.99 E-value=14 Score=33.58 Aligned_cols=100 Identities=15% Similarity=0.122 Sum_probs=68.3
Q ss_pred CCCceEEEeC---CCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH-HHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDA---DSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~ 111 (342)
.++.++++.. .++ -.+|.+.+...+.... .....++.++|+++...|-...+-. ..++++..|+..+..++
T Consensus 174 ~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~v~~~~ 252 (541)
T 1v25_A 174 PERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAAS-LVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGP 252 (541)
T ss_dssp CTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTT-STTTTCCCTTCEEEECSCTTSHHHHTHHHHHHHHTCEEEECTT
T ss_pred CCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhh-hcccccCCCCCEEEEeccchhhhHHHHHHHHHhcCceEEeeCC
Confidence 3466665532 222 4688888764433211 1123477889999888887654433 45778889998888776
Q ss_pred CCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 VYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
...++.+.+.+++.++.++...+.....+
T Consensus 253 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 281 (541)
T 1v25_A 253 RLDPASLVELFDGEGVTFTAGVPTVWLAL 281 (541)
T ss_dssp CCSHHHHHHHHHHTTCCEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHhcCeeEEecchHHHHHH
Confidence 67889999999999999999877655443
No 56
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=75.97 E-value=28 Score=31.15 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=64.9
Q ss_pred CCCceEEEe---CCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH-HHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALID---ADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~---~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~ 111 (342)
.++.++++. +.+| -.+|.+.+...+...... .++.++|+++...|-...+-. ..+.+...|+..+.+.
T Consensus 158 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~~- 233 (509)
T 3ivr_A 158 GAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDA---WRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIAA- 233 (509)
T ss_dssp CTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHh---hCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEec-
Confidence 456666653 3233 578998887776665554 478899999998887655432 3334344444444443
Q ss_pred CCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 VYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
...++.+.+.+++.++.++...+.....+
T Consensus 234 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 262 (509)
T 3ivr_A 234 KFDPAQAARDIEAHKVTVMAEFAPMLGNI 262 (509)
T ss_dssp SCCHHHHHHHHHHHTCCEEEEETTHHHHH
T ss_pred ccCHHHHHHHHHHHCCcEEEecHHHHHHH
Confidence 67888999999999999998877666544
No 57
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=75.05 E-value=14 Score=33.60 Aligned_cols=95 Identities=12% Similarity=0.161 Sum_probs=70.0
Q ss_pred CceEEEe---CCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCCCC
Q 019348 42 SKLALID---ADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVY 113 (342)
Q Consensus 42 ~~~a~~~---~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~ 113 (342)
+.+|++. +.+| -.+|.+.+...+..++..+ ++.++|++....|-...+ +..++.++..|+..+..+ ..
T Consensus 180 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~ 255 (549)
T 3g7s_A 180 EDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVAT---GLSHMDTIVGCMPMFHSAEFGLVNLMVTVGNEYVVMG-MF 255 (549)
T ss_dssp TSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHH---CCCTTCEEECCSCTTSHHHHHHHTTHHHHCCEEEEES-SC
T ss_pred CCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHc---CCCCCCEEEEeCcHHHHHHHHHHHHHHhcCceEEEcC-CC
Confidence 6667653 2233 4789999888777766544 788999998888876543 233667788898887775 56
Q ss_pred CHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 114 TVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 114 ~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
..+.+...+++.++.+++..+.....+
T Consensus 256 ~~~~~~~~i~~~~~t~~~~~P~~~~~l 282 (549)
T 3g7s_A 256 NQEMLAENIEKYKGTFSWAVPPALNVL 282 (549)
T ss_dssp CHHHHHHHHHHTTCCEEEECHHHHHHH
T ss_pred CHHHHHHHHHHhCCeEEEeCCHHHHHH
Confidence 788899999999999999887665544
No 58
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=74.76 E-value=14 Score=32.85 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=72.8
Q ss_pred CCCCCeEEEEcCC--CCCCCchhhhHhHHHHHHHhhhhhhhhccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEE
Q 019348 189 VKQTDAAALLYSS--GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (342)
Q Consensus 189 ~~~~~~~~i~~TS--GtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~ 266 (342)
..++.++++.... +.+| ....+|++.+...+..+.....-...++|++...++-.. .++..+++++..|+..+.
T Consensus 36 ~~pd~~Al~~~~~~~~~~g--~~~~~Ty~el~~~~~~lA~~L~~~g~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vp 111 (480)
T 3t5a_A 36 LQPHDPAFTFMDYEQDWDG--VAITLTWSQLYRRTLNVAQELSRCGSTGDRVVISAPQGL--EYVVAFLGALQAGRIAVP 111 (480)
T ss_dssp HSTTSEEEEEEETTTCTTC--EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEECCSSH--HHHHHHHHHHHTTCEEEE
T ss_pred hCCCCceEEEecccCCCCC--ceEEEcHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcH--HHHHHHHHHHHhCcEEEe
Confidence 3467777765432 2223 224678888888766544333222237888887777654 344778999999999887
Q ss_pred ccC----CCHHHHHHHHHhccceEEEecHHHHHHHHc
Q 019348 267 MGK----FDIEMALRAIEKYRVTVWWVVPPIILALAK 299 (342)
Q Consensus 267 ~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 299 (342)
... ...+++...+++.++..++..+.....+.+
T Consensus 112 l~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 112 LSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp ECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred eCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 753 456888899999999999998877666554
No 59
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=72.14 E-value=13 Score=33.73 Aligned_cols=98 Identities=17% Similarity=0.195 Sum_probs=68.4
Q ss_pred CCCceEEEeCCCC-------cceeHHHH-HHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH--HHHHHHHhCCeEecc
Q 019348 40 YSSKLALIDADSD-------ESLSFSQF-KSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTA 109 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l-~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l 109 (342)
.|+.++++...+| -.+|.+.+ ...... .....++.++|++....|-...+-. .++..+..|+..+.+
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~---~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 257 (529)
T 2v7b_A 181 GCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELY---AKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILM 257 (529)
T ss_dssp CTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHT---CCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECC
T ss_pred CCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHH---hhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEe
Confidence 4577777643322 46788877 322211 1123478899999888887766543 356788899998888
Q ss_pred CCCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
++....+.+...+++.++.+++..+.....+
T Consensus 258 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 288 (529)
T 2v7b_A 258 AERPTADAIFARLVEHRPTVFYGVPTLYANM 288 (529)
T ss_dssp CSCCCHHHHHHHHHHSCCSEEEECHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhCCEEEEecHHHHHHH
Confidence 7777888999999999999999887765544
No 60
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=71.46 E-value=22 Score=32.17 Aligned_cols=99 Identities=7% Similarity=0.037 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhh-ccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEEc
Q 019348 189 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ-ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (342)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 267 (342)
..++.++++.... | -.+|++.+...+..+.... ..+..++|++...++-+. .++..+++++..|+..+..
T Consensus 34 ~~p~~~a~~~~~~---~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 34 NHSSKPCLINGAN---G----DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSP--EFVLAFLGASHRGAIITAA 104 (536)
T ss_dssp GSTTSEEEEETTT---C----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHHTCEEEEC
T ss_pred cCCCceEEEECCC---C----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHHhCCEEecc
Confidence 3567788765322 2 3478888887765543222 234568899888887754 3447789999999998877
Q ss_pred c-CCCHHHHHHHHHhccceEEEecHHHHHH
Q 019348 268 G-KFDIEMALRAIEKYRVTVWWVVPPIILA 296 (342)
Q Consensus 268 ~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~ 296 (342)
. ...++++...++..++..++..+.....
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 134 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEK 134 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHH
Confidence 5 4678999999999999999988754443
No 61
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=70.68 E-value=37 Score=30.44 Aligned_cols=96 Identities=11% Similarity=0.226 Sum_probs=66.8
Q ss_pred CCCceEEEeCC---CC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH--HHHHHHHHhCCeEeccC
Q 019348 40 YSSKLALIDAD---SD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP--ICFLGVIAIGAIASTAN 110 (342)
Q Consensus 40 ~p~~~a~~~~~---~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~ 110 (342)
.++.+|++... ++ -.+|.+.+...+..+...+ ++.++|++...+|-...+- ..+++.+..|+..+..+
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (505)
T 3nyq_A 153 DDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG 229 (505)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS
T ss_pred CCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC
Confidence 45677765332 22 5789999888877766555 7788999888777655432 34788899999888764
Q ss_pred CCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
....+.+...+ +.++.+++..+.....+
T Consensus 230 -~~~~~~~~~~i-~~~~t~~~~~P~~~~~l 257 (505)
T 3nyq_A 230 -RFSTEGAAREL-NDGATMLFGVPTMYHRI 257 (505)
T ss_dssp -SCCHHHHHHHH-TTTCCEEEECHHHHHHH
T ss_pred -CCChHHHHHHH-hhCCeEEEehHHHHHHH
Confidence 45666666666 66888888776655443
No 62
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=68.47 E-value=40 Score=31.54 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=70.7
Q ss_pred CCCCeEEEEcCCCCCCCchhhhHhHHHHHHHhhhhhhhh--ccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEEc
Q 019348 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ--ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (342)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 267 (342)
.++.+|++.... .+|. ...+|++.+...+..+.... ..+..++|++...+|..-- ++..+++++..|+..+..
T Consensus 95 ~pd~~Al~~~~~-~~~~--~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e--~v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEGD-EPGQ--GYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPE--AIITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEECS-STTC--CEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHH--HHHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEee
Confidence 456777765322 1221 23578888888766654433 3456789999999988653 337789999999987776
Q ss_pred -cCCCHHHHHHHHHhccceEEEecHH
Q 019348 268 -GKFDIEMALRAIEKYRVTVWWVVPP 292 (342)
Q Consensus 268 -~~~~~~~~~~~i~~~~~t~~~~~P~ 292 (342)
+.+.++.+...+++.++.++++...
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEccc
Confidence 5678899999999999999988653
No 63
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=67.64 E-value=22 Score=30.08 Aligned_cols=92 Identities=9% Similarity=-0.062 Sum_probs=59.1
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (342)
.++.+-..+.+.+=|+++-- +..+...+.+.| +++|+.|.+....+-.-..+.++|...|.-++.+-|...+.....
T Consensus 35 ~~i~~K~E~~~ptGSfK~R~--a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 112 (334)
T 3tbh_A 35 AKVVLKMECENPMASVKDRL--GFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRC 112 (334)
T ss_dssp SEEEEEEGGGSTTSBTHHHH--HHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred CEEEEEeCCCCCccCcHHHH--HHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHH
Confidence 35556555434444555431 222223334445 478888656566677777888888888987665555555556677
Q ss_pred HhhhcCceEEEEccc
Q 019348 121 QVKDSNPKLVITVPE 135 (342)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (342)
.++..+.++++++..
T Consensus 113 ~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 113 LLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHCCCEEEEECCC
Confidence 889999999999754
No 64
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=67.13 E-value=20 Score=32.77 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=66.3
Q ss_pred CCCceEEEeCC---CC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH-HHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDAD---SD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~---~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~ 111 (342)
.++.+|++... +| -.+|.+.+...+.... ...++.++|+++...+-+...- ..++..+..|+..+..+.
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 256 (563)
T 1amu_A 180 KSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFE---NSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILK 256 (563)
T ss_dssp CTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHH---HTSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHH---HhcCCCCCCEEEEeCCccHHHHHHHHHHHHHCCCEEEEcCh
Confidence 45677765332 22 4688888765544433 3458889999998887765433 346778888988877654
Q ss_pred C--CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
. .....+.+.+++.++.++...+.....+
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 287 (563)
T 1amu_A 257 DTINDFVKFEQYINQKEITVITLPPTYVVHL 287 (563)
T ss_dssp HHHTCHHHHHHHHHHTTCCEEEECHHHHTTS
T ss_pred HhhcCHHHHHHHHHHcCCcEEEeCHHHHHHH
Confidence 3 4677888899999999988876554433
No 65
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=65.18 E-value=29 Score=31.74 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=68.5
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-hHHHHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 111 (342)
.|+.+|++...+| -.+|.+.+..... .....++.++|+++...|-+. -+...+++.+..|+..+..+.
T Consensus 212 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~----~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 287 (570)
T 4gr5_A 212 GPEDVACVMFTSGSTGRPKGVMSPHRALTGTYL----GQDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQSG 287 (570)
T ss_dssp CTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHS----SCCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEECSS
T ss_pred CCCCeEEEEECCcCCCCCeEEEEecHHHHHHHH----hhhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEcCC
Confidence 4677887744322 4678877743322 123447889999998888764 345567788889998777654
Q ss_pred -CCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 -VYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 -~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
...+..+.+.+++.++.++...+.....+
T Consensus 288 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 317 (570)
T 4gr5_A 288 QNPDPLEIGELVARHGVTMLQLSASLFNFL 317 (570)
T ss_dssp SSCCHHHHHHHHHHHTCCEEEEEHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 45778899999999999998877665544
No 66
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=63.04 E-value=33 Score=31.79 Aligned_cols=97 Identities=10% Similarity=0.170 Sum_probs=67.9
Q ss_pred CCCceEEEeC---CCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH-HHHHHHHHhCCeEeccC-
Q 019348 40 YSSKLALIDA---DSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTAN- 110 (342)
Q Consensus 40 ~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~- 110 (342)
.|+.+|++.. .+| -.+|.+.+...+. .....++.++|+++...+-+.+.- ..+++.+..|+..+..+
T Consensus 162 ~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~----~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 237 (620)
T 4dg8_A 162 AADQIAYINFSSGTTGRPKAIACTHAGITRLCL----GQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDL 237 (620)
T ss_dssp CTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHS----SCGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCS
T ss_pred CCCCeEEEEECCCccccCeEEEEchHHHHHHHH----HHHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCcc
Confidence 3677776533 222 4688887754332 233458889999999988776543 44678888898877653
Q ss_pred CCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
....++.+.+.+++.++.++...+.....+
T Consensus 238 ~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l 267 (620)
T 4dg8_A 238 GPLDPGVLRQLIGERGADSAWLTASLFNTL 267 (620)
T ss_dssp SSCCHHHHHHHHHTTCCCEEEEEHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCcEEEccHHHHHHH
Confidence 346788899999999999998877665544
No 67
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=61.32 E-value=65 Score=28.84 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=67.8
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 111 (342)
.++.++++...+| -.+|.+.+...+..+.... ..++..++++....+-+... +..+++++..|+..+..+.
T Consensus 143 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G~~~~~~~~ 221 (521)
T 3l8c_A 143 KGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDA-AFDVPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPK 221 (521)
T ss_dssp CTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCT-TTCCCSSCEEECCSCTTSGGGHHHHHHHHHTTCEEEECCG
T ss_pred CCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhcc-ccCCCCCCeEEecCCccHHHHHHHHHHHHhcCCEEEEcCH
Confidence 3567777644322 5689988876555443321 24777888888777766544 4456778888988877765
Q ss_pred C--CCHHHHHHHhhhcCceEEEEcccchhh
Q 019348 112 V--YTVSELSKQVKDSNPKLVITVPELWDK 139 (342)
Q Consensus 112 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~ 139 (342)
. ....++...+++.++.++...+.....
T Consensus 222 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 251 (521)
T 3l8c_A 222 ELVADFKQLFTTIAQLPVGIWTSTPSFADM 251 (521)
T ss_dssp GGTTCHHHHHHHHHHSCCSEEEECHHHHHH
T ss_pred HHhhCHHHHHHHHHHcCCcEEEeCCCHHHH
Confidence 4 366788889999999999887665544
No 68
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=60.75 E-value=30 Score=31.45 Aligned_cols=97 Identities=10% Similarity=0.106 Sum_probs=68.1
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH--HHHHHHHHhCCeEeccC
Q 019348 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP--ICFLGVIAIGAIASTAN 110 (342)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~ 110 (342)
.|+.++++...+| -.+|.+.+...+..+... ..++.++|+++...|-...+- ..+++.+..|+..+.+.
T Consensus 174 ~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~--~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~ 251 (576)
T 3gqw_A 174 VPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHD--GIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLR 251 (576)
T ss_dssp CTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHT--TSCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECC
T ss_pred CCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhc--ccCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEEcc
Confidence 3677887755322 568998887665544322 257889999998888776543 45677788888877665
Q ss_pred CC---CCHHHHHHHhhhcCceEEEEcccchh
Q 019348 111 PV---YTVSELSKQVKDSNPKLVITVPELWD 138 (342)
Q Consensus 111 ~~---~~~~~l~~~l~~~~~~~vi~~~~~~~ 138 (342)
+. ..+..+.+.+++.++.+++..+....
T Consensus 252 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 282 (576)
T 3gqw_A 252 TQDFAMRPLQWLKLISKNRGTVSVAPPFGYE 282 (576)
T ss_dssp HHHHHHCTTHHHHHHHHTTCCEEEECHHHHH
T ss_pred hhHhhhCHHHHHHHHHHhCCeEEEcCHHHHH
Confidence 42 35567888999999999988765543
No 69
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=60.45 E-value=26 Score=29.74 Aligned_cols=92 Identities=15% Similarity=0.048 Sum_probs=61.6
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHh
Q 019348 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (342)
Q Consensus 43 ~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 122 (342)
++++-..+.+.+=||++=- ....+.....+.-+.+|++..+....+-.-..+-++|..+|.-++.+=|...+.+....+
T Consensus 51 ~IylK~E~lnptGSfK~Rg-A~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~ 129 (344)
T 3vc3_A 51 YVAVKQEMMQPTASIADRP-AYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTM 129 (344)
T ss_dssp EEEEEEGGGSTTSBTTHHH-HHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHH
T ss_pred EEEEEecCCCCCCCcHHHH-HHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHH
Confidence 4555555434455555321 122333334443457787666777778888888999999998776666666666777889
Q ss_pred hhcCceEEEEccc
Q 019348 123 KDSNPKLVITVPE 135 (342)
Q Consensus 123 ~~~~~~~vi~~~~ 135 (342)
+..++++++++..
T Consensus 130 ~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 130 RAFGAELILTDPA 142 (344)
T ss_dssp HHTTCEEEEECGG
T ss_pred HHcCCEEEEECCC
Confidence 9999999998753
No 70
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=60.29 E-value=40 Score=31.41 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=66.3
Q ss_pred CCceEEEeCC---CC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH--HHHHHHHHhCCeEeccCC
Q 019348 41 SSKLALIDAD---SD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP--ICFLGVIAIGAIASTANP 111 (342)
Q Consensus 41 p~~~a~~~~~---~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~ 111 (342)
++.++++-.. +| -.+|.+.+...+..... ...+++++|++....+-+...- ..+++.+..|+..+..+.
T Consensus 255 ~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~ 332 (652)
T 1pg4_A 255 AEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFK--YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEG 332 (652)
T ss_dssp TTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHH--HHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECS
T ss_pred CCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHH--HhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEECC
Confidence 5667765332 22 35777776544322111 2357889999888877776544 346788999999887764
Q ss_pred C---CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 V---YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~---~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
. ..++.+.+.+++.++.++.+.+.....+
T Consensus 333 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 364 (652)
T 1pg4_A 333 VPNWPTPARMCQVVDKHQVNILYTAPTAIRAL 364 (652)
T ss_dssp CTTSSSTTHHHHHHHHHTCSEEEECHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 2 3567899999999999999887665544
No 71
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=57.89 E-value=1.3 Score=40.89 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=25.9
Q ss_pred CCCCCeEEEEcCCCCC-CCchhhhHhHHHHHH
Q 019348 189 VKQTDAAALLYSSGTT-GVSKGVILTHKNFIA 219 (342)
Q Consensus 189 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~ 219 (342)
..++.+.++..||||| |+||.+.+|...+-.
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 4567788999999999 889999998887655
No 72
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=57.08 E-value=1.8 Score=39.82 Aligned_cols=32 Identities=25% Similarity=0.229 Sum_probs=26.2
Q ss_pred CCCCCCeEEEEcCCCCC-CCchhhhHhHHHHHH
Q 019348 188 SVKQTDAAALLYSSGTT-GVSKGVILTHKNFIA 219 (342)
Q Consensus 188 ~~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~ 219 (342)
-..++.+.+...||||| |++|.+.+|...+-.
T Consensus 94 iL~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 94 ILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred ccCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 34566778899999999 789999999887755
No 73
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=55.22 E-value=28 Score=29.83 Aligned_cols=61 Identities=11% Similarity=0.007 Sum_probs=38.6
Q ss_pred HHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-----CCHHHHHHHhhhcC--ceEEEE
Q 019348 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSN--PKLVIT 132 (342)
Q Consensus 69 ~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~--~~~vi~ 132 (342)
..|...++++||.|++..+... ...-++...|+.++.++.. ...+++...+..-+ +++|+.
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~---~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~ 135 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFP---ATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVP 135 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCT---HHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECC
T ss_pred HHHHHcCCCCcCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEE
Confidence 3345557889999887655433 3445667889877665532 36677887774334 667664
No 74
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=54.40 E-value=49 Score=32.59 Aligned_cols=101 Identities=14% Similarity=0.146 Sum_probs=71.1
Q ss_pred cCCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCChHH--HHHHHHHHhCCeEec
Q 019348 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFP--ICFLGVIAIGAIAST 108 (342)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~ 108 (342)
..|+.+|++...+| -.+|.+.+...+........ ..++.++|++....|-...+- ..++..+..|+..+.
T Consensus 222 ~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~ 301 (979)
T 3tsy_A 222 ISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILI 301 (979)
T ss_dssp CCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEE
T ss_pred CCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEE
Confidence 35678887644322 57888888776554433322 347788999988888765433 346778889998877
Q ss_pred cCCCCCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 109 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
.+ ....+.+...+++.++.++...+.....+
T Consensus 302 ~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 332 (979)
T 3tsy_A 302 MP-KFEINLLLELIQRCKVTVAPMVPPIVLAI 332 (979)
T ss_dssp CS-SCCHHHHHHHHHHHTCCEEEECHHHHHHH
T ss_pred eC-CCCHHHHHHHHHHhCCeEEEcHHHHHHHH
Confidence 64 56778899999999999998877655443
No 75
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=52.87 E-value=53 Score=29.37 Aligned_cols=81 Identities=7% Similarity=0.012 Sum_probs=60.2
Q ss_pred hHhHHHHHHHhhhhhhhh-ccccCCCeEEEEccchhHHHHHHHHHHHHhhcCCeEEEcc-CCCHHHHHHHHHhccceEEE
Q 019348 211 ILTHKNFIAASLMISAHQ-ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 288 (342)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 288 (342)
.+|++.+...+..+.... ..+..++|++...++-+. .++..+++++..|+..+..+ ....+++...+++.++..++
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi 105 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSV--EALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVV 105 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH--HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEE
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 478888887765543222 224568899888887754 33377899999999988875 46788999999999999999
Q ss_pred ecHHH
Q 019348 289 VVPPI 293 (342)
Q Consensus 289 ~~P~~ 293 (342)
+.+..
T Consensus 106 ~~~~~ 110 (503)
T 4fuq_A 106 CDPSK 110 (503)
T ss_dssp ECGGG
T ss_pred ECchh
Confidence 87653
No 76
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=52.28 E-value=2.4 Score=38.97 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=26.0
Q ss_pred CCCCCeEEEEcCCCCC-CCchhhhHhHHHHHH
Q 019348 189 VKQTDAAALLYSSGTT-GVSKGVILTHKNFIA 219 (342)
Q Consensus 189 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~ 219 (342)
..++.+.+...||||| |++|.+.+|...+-.
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~ 121 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLDN 121 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHHH
Confidence 4566778899999999 789999999987755
No 77
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=48.39 E-value=57 Score=29.85 Aligned_cols=99 Identities=5% Similarity=0.027 Sum_probs=65.5
Q ss_pred CCCceEEEeC---CCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHH--HHHHHHHhCCeEeccC
Q 019348 40 YSSKLALIDA---DSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTAN 110 (342)
Q Consensus 40 ~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~ 110 (342)
.++.++++.. .++ -.+|...+..... ......++.+++++....+.+...-. .+++.+..|+..+..+
T Consensus 223 ~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 299 (580)
T 3etc_A 223 KNEDICLVYFSSGTAGFPKMVEHDNTYPLGHIL---TAKYWQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYD 299 (580)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEETTHHHHHHH---HHHTTSCCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEEeCCCCCCccEEEeccHHHHHHHH---HHHHhhCCCCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEEec
Confidence 4567776533 222 2455543332222 22223578889988887776654433 4678899999888775
Q ss_pred -CCCCHHHHHHHhhhcCceEEEEcccchhhhh
Q 019348 111 -PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (342)
Q Consensus 111 -~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (342)
....++.+...+++.++.++...+.....+.
T Consensus 300 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 331 (580)
T 3etc_A 300 YDRFEAKNMLEKASKYGVTTFCAPPTIYRFLI 331 (580)
T ss_dssp CSSCCHHHHHHHHHHHTCCEEEECHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCeEEEccHHHHHHHH
Confidence 5667889999999999999998877666553
No 78
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=48.04 E-value=61 Score=29.36 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=61.4
Q ss_pred cceeHHHHHHHHHHHHHHHH-----HcCCCCCCEEEEECCCCChH-HHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcC
Q 019348 53 ESLSFSQFKSIVIKVSHSFR-----HLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSN 126 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~-----~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 126 (342)
-.+|.+.+...+..++..+. ...+..++++....+..... +..++..+..|+..+........+.+...+++.+
T Consensus 193 V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 272 (562)
T 3ite_A 193 VRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELG 272 (562)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTT
T ss_pred EEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcC
Confidence 46899999888887776653 24567778877777666543 3446778888988776654444456778889999
Q ss_pred ceEEEEcccchhh
Q 019348 127 PKLVITVPELWDK 139 (342)
Q Consensus 127 ~~~vi~~~~~~~~ 139 (342)
+.++...+.....
T Consensus 273 ~t~~~~~P~~l~~ 285 (562)
T 3ite_A 273 VTHAGIVPSLLDQ 285 (562)
T ss_dssp CCEEEECHHHHHH
T ss_pred CCEEEcCHHHHhh
Confidence 9998887665443
No 79
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=45.65 E-value=94 Score=26.23 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=47.9
Q ss_pred ceeHHHHHHHH--HHHH-HHHHH-cCCCCCCEEEEECCCCC-hHHHHHHHHHHhCC-eEeccCCCCCHHHHHHHhhhcCc
Q 019348 54 SLSFSQFKSIV--IKVS-HSFRH-LGITKKDVVLIFAPNSI-HFPICFLGVIAIGA-IASTANPVYTVSELSKQVKDSNP 127 (342)
Q Consensus 54 ~~Ty~~l~~~~--~~la-~~L~~-~g~~~g~~V~i~~~n~~-~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 127 (342)
.+++.+..... -..| +.|.+ .++++|++|+|....+. -.+++.+| ...|+ +++..++....++....++..++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqla-k~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIA-AALGLRTINVVRDRPDIQKLSDRLKSLGA 217 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEECCCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHH-HHcCCEEEEEecCccchHHHHHHHHhcCC
Confidence 56777654321 1122 23434 48999999999987554 44444444 45687 44455554444555566778888
Q ss_pred eEEEEc
Q 019348 128 KLVITV 133 (342)
Q Consensus 128 ~~vi~~ 133 (342)
+.++..
T Consensus 218 ~~vi~~ 223 (357)
T 1zsy_A 218 EHVITE 223 (357)
T ss_dssp SEEEEH
T ss_pred cEEEec
Confidence 887753
No 80
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=45.30 E-value=60 Score=26.93 Aligned_cols=77 Identities=21% Similarity=0.154 Sum_probs=48.2
Q ss_pred cceeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 53 ESLSFSQFKSIVIK---VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~---la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
..+++.+....... ..+.|+..++++|++|+|....+.--..+...+...|+..+.+. +.++ ...+++.+++.
T Consensus 124 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~---~~~~-~~~~~~lGa~~ 199 (321)
T 3tqh_A 124 EKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA---SKRN-HAFLKALGAEQ 199 (321)
T ss_dssp TTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---CHHH-HHHHHHHTCSE
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe---ccch-HHHHHHcCCCE
Confidence 35677776543322 12334667999999999997556555555555567788665553 3444 56677788887
Q ss_pred EEEc
Q 019348 130 VITV 133 (342)
Q Consensus 130 vi~~ 133 (342)
++..
T Consensus 200 ~i~~ 203 (321)
T 3tqh_A 200 CINY 203 (321)
T ss_dssp EEET
T ss_pred EEeC
Confidence 6643
No 81
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=44.75 E-value=87 Score=27.52 Aligned_cols=63 Identities=17% Similarity=0.050 Sum_probs=46.3
Q ss_pred HHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcc
Q 019348 72 RHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 72 ~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
.+.|. .+|....+....+-.-..+.+++...|.-++.+-|...+......++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 45554 6675555556667777788888999998776665655566677788999999999974
No 82
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=44.50 E-value=72 Score=24.58 Aligned_cols=57 Identities=9% Similarity=-0.001 Sum_probs=41.1
Q ss_pred CCEEEEECCCC--ChHHHHH--HHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEccc
Q 019348 79 KDVVLIFAPNS--IHFPICF--LGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (342)
Q Consensus 79 g~~V~i~~~n~--~~~~~~~--lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 135 (342)
+.+|.+.+..+ .+.-..+ ..+-..|.-++.+....+.+++...++..+|++|..+..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 33566655443 3333333 334477889999999999999999999999999987643
No 83
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=44.15 E-value=96 Score=25.80 Aligned_cols=92 Identities=17% Similarity=0.039 Sum_probs=54.7
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (342)
.++.+-..+.+-+-|+++--.. ..+. .+.+.| +++|+...+....+-.-..+.+++...|.-++.+-|...+.....
T Consensus 30 ~~v~~K~E~~~ptGSfK~R~a~-~~l~-~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 107 (322)
T 1z7w_A 30 GRVAAKLEMMEPCSSVKDRIGF-SMIS-DAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRI 107 (322)
T ss_dssp SEEEEEEGGGSTTSBTHHHHHH-HHHH-HHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred ceEEEEecccCCCCchHHHHHH-HHHH-HHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHH
Confidence 3555554433344455443211 1222 234445 355643444455666677777888899987666555544556677
Q ss_pred HhhhcCceEEEEccc
Q 019348 121 QVKDSNPKLVITVPE 135 (342)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (342)
.++..++++++++.+
T Consensus 108 ~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 108 ILLAFGVELVLTDPA 122 (322)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEeCCC
Confidence 888999999998753
No 84
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=43.45 E-value=1e+02 Score=25.74 Aligned_cols=56 Identities=14% Similarity=0.057 Sum_probs=33.1
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+....+.....++...|+.++.++.. ...+++...++. ++++|+..
T Consensus 87 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 146 (384)
T 1eg5_A 87 KRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIM 146 (384)
T ss_dssp TTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEE
Confidence 578887776554444434444445678766655432 356677777654 56777654
No 85
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=42.91 E-value=1.1e+02 Score=25.93 Aligned_cols=60 Identities=22% Similarity=0.197 Sum_probs=38.5
Q ss_pred HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhc--CceEEEEcc
Q 019348 72 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDS--NPKLVITVP 134 (342)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~--~~~~vi~~~ 134 (342)
+..++++||.|++..+...... .++...|+.++.++.. ...+++...++.. ++++|+...
T Consensus 65 ~~l~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 65 RVAGVKQDDIVLASSFTFIASV---APICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HHTTCCTTCEEEEESSSCGGGT---HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HHcCCCCCCEEEECCCccHHHH---HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 3335678999888776655543 3445578776666543 3567788877754 567776653
No 86
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=41.70 E-value=72 Score=26.78 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=34.9
Q ss_pred CCCCCCEEEEECCCCCh----HHHHHHH---HHHhCCeEeccCCC------------CCHHHHHHHhhhcCceEEEEcc
Q 019348 75 GITKKDVVLIFAPNSIH----FPICFLG---VIAIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 75 g~~~g~~V~i~~~n~~~----~~~~~lA---~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
-+++||+|+|+.|.+.- --....| +-..|.-++.-+.. ...+++.+.+.+-.+++|++..
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 86 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI 86 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 46788888888876531 1112222 22346555433221 1335677788888999999873
No 87
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=41.55 E-value=90 Score=26.13 Aligned_cols=77 Identities=14% Similarity=0.104 Sum_probs=48.7
Q ss_pred cceeHHHHHHHHHHH---HHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 53 ESLSFSQFKSIVIKV---SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~l---a~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
..+++.+........ .+.++..++++|++|+|...-+.-..++.++....|+.++.++. +++ -..+.+...++.
T Consensus 135 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~--~~~-r~~~~~~~Ga~~ 211 (348)
T 4eez_A 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI--NQD-KLNLAKKIGADV 211 (348)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES--CHH-HHHHHHHTTCSE
T ss_pred CCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC--cHH-HhhhhhhcCCeE
Confidence 356777654443332 23356668999999999987656666666666666776665543 233 345666777777
Q ss_pred EEE
Q 019348 130 VIT 132 (342)
Q Consensus 130 vi~ 132 (342)
++-
T Consensus 212 ~i~ 214 (348)
T 4eez_A 212 TIN 214 (348)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 88
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=41.11 E-value=1.2e+02 Score=26.56 Aligned_cols=55 Identities=9% Similarity=0.122 Sum_probs=25.6
Q ss_pred CCCCCEEEEECCCCChHHHHHH--HHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFL--GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~l--A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++.-+ ........+ .+...|..++.++.. ..+++...++. ++++|+++
T Consensus 118 ~~~Gd~Vi~~~~-~y~~~~~~~~~~~~~~G~~~~~v~~~-d~~~l~~ai~~-~t~~v~~e 174 (430)
T 3ri6_A 118 ARAGDSVVTTDR-LFGHTLSLFQKTLPSFGIEVRFVDVM-DSLAVEHACDE-TTKLLFLE 174 (430)
T ss_dssp CCTTCEEEEETT-CCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEcCC-CchhHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhhCC-CCeEEEEE
Confidence 356666644433 222222222 444556665555544 44555555543 45555543
No 89
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=40.01 E-value=1.4e+02 Score=23.73 Aligned_cols=83 Identities=18% Similarity=0.099 Sum_probs=44.3
Q ss_pred HHHHHHcCCCCCCEEEEECCCCCh-HHHH-----HHHHHHhCCe-EeccCCCCCHHH---HHHHhhhcCceEEEEcccch
Q 019348 68 SHSFRHLGITKKDVVLIFAPNSIH-FPIC-----FLGVIAIGAI-ASTANPVYTVSE---LSKQVKDSNPKLVITVPELW 137 (342)
Q Consensus 68 a~~L~~~g~~~g~~V~i~~~n~~~-~~~~-----~lA~~~~G~~-~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~~~ 137 (342)
|+.|+. ++...|+++.++... |... .-++...|.. .+..+.....+. +.+.+...+++.+|...+..
T Consensus 2 Ar~L~~---~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~ 78 (277)
T 3hs3_A 2 SLTLYQ---KKSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALISFSTNSDVKKYQNAIINFENNNVDGIITSAFTI 78 (277)
T ss_dssp ---------CCCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred chhhhc---CCCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcchHH
Confidence 455554 345578888876432 2222 2245567877 666666555543 33344556888888776444
Q ss_pred hhhhccCCCeEEecCC
Q 019348 138 DKVKDLNLPAVLLGSK 153 (342)
Q Consensus 138 ~~~~~~~~~~~~~~~~ 153 (342)
..+...+.+.+.++..
T Consensus 79 ~~~~~~~iPvV~~~~~ 94 (277)
T 3hs3_A 79 PPNFHLNTPLVMYDSA 94 (277)
T ss_dssp CTTCCCSSCEEEESCC
T ss_pred HHHHhCCCCEEEEccc
Confidence 4444455677776643
No 90
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=39.85 E-value=1.4e+02 Score=24.73 Aligned_cols=90 Identities=10% Similarity=0.008 Sum_probs=54.0
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHH
Q 019348 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (342)
Q Consensus 43 ~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (342)
++.+...+.+.+-++++--. ..+...+.+.|. ++|+.|.. ...+-.-..+.++|...|.-++.+-|...+..-...
T Consensus 32 ~i~~K~E~~~ptgSfK~R~a--~~~l~~a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 108 (313)
T 2q3b_A 32 DIVAKLEFFNPANSVKDRIG--VAMLQAAEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRML 108 (313)
T ss_dssp EEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred EEEEEehhcCCCCcHHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 45554443344556655322 222333344453 56666544 555656666777788999866655554444556677
Q ss_pred hhhcCceEEEEccc
Q 019348 122 VKDSNPKLVITVPE 135 (342)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (342)
++..+.++++++..
T Consensus 109 ~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 109 LRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHCCCEEEEeCCC
Confidence 88999999998853
No 91
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=39.85 E-value=1.1e+02 Score=25.86 Aligned_cols=55 Identities=9% Similarity=0.220 Sum_probs=35.9
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-------CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-------YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~ 133 (342)
.++||.|++..+.. .....++...|+.++.++.. ...+++...++..++++|+..
T Consensus 106 ~~~gd~vl~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~ 167 (391)
T 3dzz_A 106 TSPGDQILVQEPVY---NMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFC 167 (391)
T ss_dssp SCTTCEEEECSSCC---HHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEE
T ss_pred CCCCCeEEECCCCc---HHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEE
Confidence 35788877654433 33445566788877766553 567888888876677777654
No 92
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=38.48 E-value=88 Score=32.01 Aligned_cols=97 Identities=10% Similarity=0.138 Sum_probs=68.3
Q ss_pred CCCceEEEeCC---CC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHH-HHHHHHHHhCCeEeccCC
Q 019348 40 YSSKLALIDAD---SD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTANP 111 (342)
Q Consensus 40 ~p~~~a~~~~~---~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~ 111 (342)
.|+.+|++-.. +| -.+|.+.+... .......++.++|+++...+-+.+.. .-+++.+..|+..+..++
T Consensus 605 ~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~----~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 680 (1304)
T 2vsq_A 605 DPNDPAYIMYTSGTTGKPKGNITTHANIQGL----VKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADE 680 (1304)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHH----HSSCCSSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCG
T ss_pred CCCCeEEEEeCCCCCCCCCEEEEehHHHHHH----HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECCh
Confidence 46777766332 22 46888877532 22224458889999988887776544 346788888988887765
Q ss_pred C--CCHHHHHHHhhhcCceEEEEcccchhhh
Q 019348 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (342)
Q Consensus 112 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (342)
. ..++.+...+++.++.++...+.....+
T Consensus 681 ~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l 711 (1304)
T 2vsq_A 681 HTLLDTERLTDLILQENVNVMFATTALFNLL 711 (1304)
T ss_dssp GGTTCHHHHHHHHHHHTCCEEEEEHHHHHHH
T ss_pred hhcCCHHHHHHHHHHcCCcEEEccHHHHHHH
Confidence 3 5678899999999999998877666554
No 93
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=37.73 E-value=68 Score=20.19 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=26.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
..+.+.++.+ .+.+.+..+++.|.++|..+.....+...+...|.
T Consensus 22 ~~ip~~~l~~-------~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~ 66 (85)
T 2jtq_A 22 INIPLKEVKE-------RIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGY 66 (85)
T ss_dssp EECCHHHHHH-------HHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTC
T ss_pred EEcCHHHHHH-------HHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCC
Confidence 3455555543 33344556677788888777666555555556664
No 94
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=37.35 E-value=55 Score=20.05 Aligned_cols=37 Identities=5% Similarity=0.097 Sum_probs=22.0
Q ss_pred CHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHHHHHH
Q 019348 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIK 66 (342)
Q Consensus 28 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~ 66 (342)
.|...+......+|+...++.. ++..+|+.+.+-...
T Consensus 31 ~L~~~l~~~~~~~~~~~V~I~a--D~~~~y~~vv~vmd~ 67 (74)
T 2jwk_A 31 MVTQLSRQEFDKDNNTLFLVGG--AKEVPYEEVIKALNL 67 (74)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEE--CTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCceEEEEc--CCCCCHHHHHHHHHH
Confidence 3455555555556666666666 556777666554443
No 95
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=36.80 E-value=1.5e+02 Score=25.00 Aligned_cols=91 Identities=10% Similarity=-0.053 Sum_probs=53.9
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (342)
.++.+-..+.+.+=||++--. ..+...+.+.|. ++|+.|... ..+-.-..+.++|...|.-++.+-|...+.....
T Consensus 42 ~~v~~K~E~~~ptGSfKdR~a--~~~l~~a~~~g~~~~g~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 118 (343)
T 2pqm_A 42 TRILVKLEYFNPMSSVKDRVG--FNIVYQAIKDGRLKPGMEIIES-TSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQM 118 (343)
T ss_dssp CEEEEEEGGGSTTSBTHHHHH--HHHHHHHHHHTSSCTTCEEEEE-CSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHH
T ss_pred cEEEEEeccCCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEEEE-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 345554543344555554322 222233334453 666665554 4455566667777889986655545444556677
Q ss_pred HhhhcCceEEEEccc
Q 019348 121 QVKDSNPKLVITVPE 135 (342)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (342)
.++..++++++++..
T Consensus 119 ~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 119 IMKAFGAELILTEGK 133 (343)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHCCCEEEEECCC
Confidence 888899999998753
No 96
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=36.67 E-value=1.5e+02 Score=25.01 Aligned_cols=55 Identities=18% Similarity=0.290 Sum_probs=34.5
Q ss_pred CCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-----CCHHHHHHHhhhcCceEEEEc
Q 019348 75 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 75 g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++++||.|++..+. +.....++...|+.++.++.+ ...+++...++. ++++|++.
T Consensus 76 ~~~~g~~Vi~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVS---WSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSS---CHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 57889988776544 333444666788766555432 256777777754 56666663
No 97
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=36.02 E-value=1e+02 Score=26.00 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=33.9
Q ss_pred CCCCCCEEEEECCCCCh------HHHHHHHHH-HhCCeEeccCC------------CCCHHHHHHHhhhcCceEEEEcc
Q 019348 75 GITKKDVVLIFAPNSIH------FPICFLGVI-AIGAIASTANP------------VYTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 75 g~~~g~~V~i~~~n~~~------~~~~~lA~~-~~G~~~v~l~~------------~~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
-+++||+|+|+.|.+.- -+-.-...+ ..|..++.-+. ....++|.+.+.+-.+++|++..
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 87 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI 87 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 45778888888777642 111112222 34655543211 11235577777778899999864
No 98
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=35.58 E-value=1.8e+02 Score=24.09 Aligned_cols=55 Identities=9% Similarity=0.116 Sum_probs=35.1
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccC--CC----CCHHHHHHHhhh----cCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--PV----YTVSELSKQVKD----SNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~----~~~~~l~~~l~~----~~~~~vi~~ 133 (342)
+++||.|++..+.... ...++...|+.++.++ .. ...+++...++. -++++++..
T Consensus 90 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~ 154 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYS---SYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALIT 154 (371)
T ss_dssp CCTTCEEEEETTCCHH---HHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEE
T ss_pred hCCCCEEEEccCcchH---HHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEE
Confidence 4678988877554333 3334677888776665 32 257788888874 366777665
No 99
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=34.92 E-value=1.2e+02 Score=25.65 Aligned_cols=58 Identities=19% Similarity=0.222 Sum_probs=33.2
Q ss_pred HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-----CCHHHHHHHhhhcCceEEEEc
Q 019348 72 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+..++++||.|++..+.... ..-++...|+.++.++.. ...+++...++. ++++|+..
T Consensus 72 ~~~~~~~gd~Vl~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 134 (393)
T 1mdo_A 72 MALGIGEGDEVITPSMTWVS---TLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 134 (393)
T ss_dssp HHTTCCTTCEEEEESSSCHH---HHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred HHcCCCCCCEEEeCCCccHh---HHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEe
Confidence 33456788887776443332 334556677765554422 356677776654 56666654
No 100
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=34.83 E-value=1.5e+02 Score=24.42 Aligned_cols=91 Identities=13% Similarity=-0.004 Sum_probs=53.5
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (342)
.++.+...+.+.+=++++--. ..+...+.+.|. ++|+.|.. ...+-.-..+.++|...|.-++.+-|...+..-..
T Consensus 29 ~~i~~K~E~~~ptgSfK~R~a--~~~l~~a~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 105 (308)
T 2egu_A 29 ADVYLKLEFMNPGSSVKDRIA--LAMIEAAEKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRN 105 (308)
T ss_dssp CEEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHH
T ss_pred CEEEEEecccCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 355554443344455554322 122223334453 56665544 45555666677777889986655544444455666
Q ss_pred HhhhcCceEEEEccc
Q 019348 121 QVKDSNPKLVITVPE 135 (342)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (342)
.++..+.++++++.+
T Consensus 106 ~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 106 LLRAYGAELVLTPGA 120 (308)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEECCC
Confidence 778999999999754
No 101
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=34.73 E-value=1.6e+02 Score=24.60 Aligned_cols=89 Identities=10% Similarity=0.002 Sum_probs=53.8
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHH
Q 019348 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (342)
Q Consensus 43 ~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (342)
++.+-..+.+.+=|+++-- +..+...+.+.| +++|+.|... ..+-.-..+.+++...|.-++.+-|...+......
T Consensus 38 ~v~~K~E~~~ptGSfK~R~--a~~~l~~a~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~ 114 (325)
T 3dwg_A 38 RLWAKLEDRNPTGSIKDRP--AVRMIEQAEADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQL 114 (325)
T ss_dssp EEEEEETTSSTTSBTTHHH--HHHHHHHHHHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHH
T ss_pred EEEEEECCCCCCCChHHHH--HHHHHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 4555555434444444311 122222234444 4666766554 45666677777888889876655555555566778
Q ss_pred hhhcCceEEEEcc
Q 019348 122 VKDSNPKLVITVP 134 (342)
Q Consensus 122 l~~~~~~~vi~~~ 134 (342)
++..+.++++++.
T Consensus 115 ~~~~GA~V~~~~~ 127 (325)
T 3dwg_A 115 LELYGAQIIFSAA 127 (325)
T ss_dssp HHHHTCEEEEECS
T ss_pred HHHCCCEEEEECC
Confidence 8999999999975
No 102
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=34.73 E-value=1.3e+02 Score=25.22 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=44.9
Q ss_pred cceeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 53 ESLSFSQFKSIVIK---VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~---la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
..+++.+....... ..+.|.+.++++|++|+|...-+.-..++.+| ...|+.++.+...... .+.++..+++.
T Consensus 148 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~---~~~~~~lGa~~ 223 (348)
T 3two_A 148 KNAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYA-VAMGAEVSVFARNEHK---KQDALSMGVKH 223 (348)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHH-HHTTCEEEEECSSSTT---HHHHHHTTCSE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHH-HHCCCeEEEEeCCHHH---HHHHHhcCCCe
Confidence 35777775432222 12345666899999999997633344444444 5678876666543322 23456678887
Q ss_pred EE
Q 019348 130 VI 131 (342)
Q Consensus 130 vi 131 (342)
++
T Consensus 224 v~ 225 (348)
T 3two_A 224 FY 225 (348)
T ss_dssp EE
T ss_pred ec
Confidence 77
No 103
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=34.69 E-value=1e+02 Score=26.38 Aligned_cols=61 Identities=8% Similarity=0.044 Sum_probs=36.1
Q ss_pred cCCCCCCEEEEECCCCCh------HHHHHHHHH-HhCCeEeccCCC------------CCHHHHHHHhhhcCceEEEEcc
Q 019348 74 LGITKKDVVLIFAPNSIH------FPICFLGVI-AIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 74 ~g~~~g~~V~i~~~n~~~------~~~~~lA~~-~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
.-+++||+|+|+.|.+.- -+-.-...+ ..|..++.-+.. ...++|.+.+.+-.+++|++..
T Consensus 38 ~~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 38 APLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 357888888888887742 111222222 356665543221 1234567777778889999864
No 104
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=34.38 E-value=2.1e+02 Score=24.12 Aligned_cols=55 Identities=13% Similarity=0.095 Sum_probs=37.6
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhc---CceEEEEcc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS---NPKLVITVP 134 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~vi~~~ 134 (342)
.++||.|++..+.. ....-++...|+.++.++. ...+++...++.. ++++|++..
T Consensus 124 ~~~gd~V~~~~p~~---~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDH---ASIIDGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCC---HHHHHHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccC---HHHHHHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 46788887775543 3334456678888877765 4677888888765 677777654
No 105
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=34.33 E-value=2e+02 Score=23.82 Aligned_cols=57 Identities=23% Similarity=0.153 Sum_probs=37.8
Q ss_pred cCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 74 LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 74 ~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
.++++|++|+|....+.--..+...+...|+.++.+.. +++++. .++..+.+.++..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCSEEEET
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 38899999999986565444444555567887666654 344444 5666777777653
No 106
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=34.10 E-value=31 Score=28.12 Aligned_cols=25 Identities=24% Similarity=0.456 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCC
Q 019348 65 IKVSHSFRHLGITKKDVVLIFAPNS 89 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~ 89 (342)
..+...|+++|+++||.|.|...-+
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl~ 42 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSLS 42 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECTG
T ss_pred HHHHHHHHHcCCCCCCEEEEEechH
Confidence 4567789999999999999987643
No 107
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=33.13 E-value=1.1e+02 Score=26.14 Aligned_cols=58 Identities=21% Similarity=0.259 Sum_probs=32.5
Q ss_pred HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-----CCHHHHHHHhhhcCceEEEEc
Q 019348 72 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+..++++||.|++..+..... ..++...|+.++.++.. ...+++...++. ++++|+..
T Consensus 75 ~~~~~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 137 (418)
T 2c81_A 75 EALGIGEGDEVIVPSLTWIAT---ATAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPV 137 (418)
T ss_dssp HHTTCCTTCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCB
T ss_pred HHcCCCCcCEEEECCCccHhH---HHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEe
Confidence 344567888877765544333 34455778766555432 245566655543 45666543
No 108
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=32.66 E-value=77 Score=26.79 Aligned_cols=91 Identities=13% Similarity=0.008 Sum_probs=51.3
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHH
Q 019348 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (342)
Q Consensus 43 ~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (342)
++.+-..+.+.+=||++ +.+......+.+.|. ++.+.| +....+-.-..+.++|.+.|.-++.+-|...+......
T Consensus 41 ~i~~K~E~~~ptGSfK~--Rga~~~i~~a~~~g~~~~~~~v-v~~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~ 117 (346)
T 3l6b_A 41 NLFFKCELFQKTGSFKI--RGALNAVRSLVPDALERKPKAV-VTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLA 117 (346)
T ss_dssp EEEEEEGGGSGGGBTHH--HHHHHHHHTTC-----CCCSCE-EEECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHH
T ss_pred eEEEEeCCCCCCCCcHH--HHHHHHHHHHHHhccccCCCEE-EEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHH
Confidence 45555553344445543 112222222333332 233343 33445666677778899999866555555555667788
Q ss_pred hhhcCceEEEEcccc
Q 019348 122 VKDSNPKLVITVPEL 136 (342)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (342)
++..+.++++++...
T Consensus 118 ~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 118 IQAYGASIVYCEPSD 132 (346)
T ss_dssp HHHTTCEEEEECSSH
T ss_pred HHHCCCEEEEECCCH
Confidence 899999999998654
No 109
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=32.20 E-value=1.3e+02 Score=25.34 Aligned_cols=60 Identities=17% Similarity=0.231 Sum_probs=34.0
Q ss_pred CCCCCCEEEEECCCCChH------HHHHHHHH-HhCCeEeccCCC------------CCHHHHHHHhhhcCceEEEEcc
Q 019348 75 GITKKDVVLIFAPNSIHF------PICFLGVI-AIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 75 g~~~g~~V~i~~~n~~~~------~~~~lA~~-~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
-+++||+|+|+.|.+.-. +-.-...+ ..|..++.-+.. ...++|.+.+.+-.+++|++..
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 86 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL 86 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 357788888887766521 11112222 346555433211 1335577777778889999863
No 110
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=32.08 E-value=1.3e+02 Score=27.17 Aligned_cols=77 Identities=10% Similarity=-0.077 Sum_probs=48.7
Q ss_pred eEEEEccchhHHHHHHH-HHHHHhhcCCeEEEccC----CCHHHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCCCc
Q 019348 236 HVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGK----FDIEMALRAIEKYR-----VTVWWVVPPIILALAKNSLVRK 305 (342)
Q Consensus 236 d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~~~ 305 (342)
-++....|+.+...+.. -+..+|.+|.++++=+. .....+.+++.+.+ ++++..-+..-..|++++
T Consensus 152 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p---- 227 (517)
T 3r31_A 152 GVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHP---- 227 (517)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCT----
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCC----
Confidence 46677777766554433 36789999999998542 34567777777763 233333345667777654
Q ss_pred cCCCCceEEEeeccc
Q 019348 306 FDISSLKLVGSGAAP 320 (342)
Q Consensus 306 ~~l~~lr~~~~gG~~ 320 (342)
.++.+.++|+.
T Consensus 228 ----~vd~I~FTGS~ 238 (517)
T 3r31_A 228 ----DVAKVSLTGSV 238 (517)
T ss_dssp ----TEEEEEEESCH
T ss_pred ----CcCEEeccCCH
Confidence 46677776643
No 111
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=31.75 E-value=35 Score=27.89 Aligned_cols=24 Identities=25% Similarity=0.462 Sum_probs=19.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCC
Q 019348 66 KVSHSFRHLGITKKDVVLIFAPNS 89 (342)
Q Consensus 66 ~la~~L~~~g~~~g~~V~i~~~n~ 89 (342)
.+...|+++|+++||.|.|...=+
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl~ 40 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSLS 40 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECSG
T ss_pred HHHHHHHHcCCCCCCEEEEEechH
Confidence 366789999999999999987543
No 112
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=31.69 E-value=1e+02 Score=27.88 Aligned_cols=87 Identities=8% Similarity=-0.042 Sum_probs=51.3
Q ss_pred eEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCC---HHHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCCCc
Q 019348 236 HVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFD---IEMALRAIEKYR-----VTVWWVVPPIILALAKNSLVRK 305 (342)
Q Consensus 236 d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~---~~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~~~ 305 (342)
-++....|+.+...+.. -+..+|.+|.++++=+ +.. ...+.+++.+.+ ++++.........|++++
T Consensus 164 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p---- 239 (521)
T 4e4g_A 164 GIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHP---- 239 (521)
T ss_dssp CEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCT----
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCC----
Confidence 46666677665544433 4678999999999854 333 356667777653 344444455567787765
Q ss_pred cCCCCceEEEeecccCC-HHHHHHHH
Q 019348 306 FDISSLKLVGSGAAPLG-KELMEDCQ 330 (342)
Q Consensus 306 ~~l~~lr~~~~gG~~l~-~~~~~~~~ 330 (342)
.++.+.++|+.-- ..+.+...
T Consensus 240 ----~vd~I~FTGS~~vG~~i~~~aa 261 (521)
T 4e4g_A 240 ----DIAAVSFVGSTPIARYVYGTAA 261 (521)
T ss_dssp ----TCCEEEEESCHHHHHHHHHHHH
T ss_pred ----CcCEEEEECCHHHHHHHHHHHh
Confidence 3566666664332 33444433
No 113
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=31.57 E-value=1.3e+02 Score=23.00 Aligned_cols=74 Identities=16% Similarity=0.113 Sum_probs=50.0
Q ss_pred CCEEEEEC-CCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcccchhhhhccCCCeEEecC
Q 019348 79 KDVVLIFA-PNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGS 152 (342)
Q Consensus 79 g~~V~i~~-~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 152 (342)
+.+|+++. +|-...+-.+-.++-.......+......++....+..-++++|+.+.-......+.+.+.+.+..
T Consensus 94 ~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A~~~Gl~~vli~s 168 (196)
T 2q5c_A 94 GNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEAIKQGLYGETINS 168 (196)
T ss_dssp CSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHHHHTTCEEEECCC
T ss_pred CCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHHHHcCCcEEEEec
Confidence 34677776 444555555555555555555555555555566666777899999988778888888888777765
No 114
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=31.52 E-value=36 Score=28.00 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=24.1
Q ss_pred CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC
Q 019348 51 SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS 89 (342)
Q Consensus 51 ~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~ 89 (342)
++..+|-.+| ...|+++|+++||.|.|...=+
T Consensus 18 ~~~~~T~~~L-------~~~L~~LGI~~Gd~llVHsSL~ 49 (286)
T 3sma_A 18 DRELVTRDRL-------ASDLAALGVRPGGVLLVHASLS 49 (286)
T ss_dssp -CCEECHHHH-------HHHHHHHTCCTTCEEEEEECST
T ss_pred cCCCcCHHHH-------HHHHHHcCCCCCCEEEEEechH
Confidence 3566776654 5678899999999999987544
No 115
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=31.36 E-value=1.1e+02 Score=26.14 Aligned_cols=55 Identities=13% Similarity=0.036 Sum_probs=38.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
.++||.|++-.+. +....-++...|+.+++++. ...+++...++..++++|+++.
T Consensus 140 ~~~gd~Vl~~~~~---~~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~ 194 (409)
T 3kki_A 140 CQPNTNVYIDFFA---HMSLWEGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDS 194 (409)
T ss_dssp CCTTCEEEEETTS---CHHHHHHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCEEEECCCc---CHHHHHHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECC
Confidence 4688988765443 44455567778988887754 4577888888876678888764
No 116
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=31.34 E-value=1.9e+02 Score=24.13 Aligned_cols=51 Identities=25% Similarity=0.280 Sum_probs=29.9
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+....+ ..++...|+.++.++ ...+++...++. ++++|+..
T Consensus 111 ~~gd~vl~~~p~~~~~---~~~~~~~g~~~~~v~--~d~~~l~~~l~~-~~~~v~~~ 161 (370)
T 2z61_A 111 DDGDEVLIQNPCYPCY---KNFIRFLGAKPVFCD--FTVESLEEALSD-KTKAIIIN 161 (370)
T ss_dssp CTTCEEEEESSCCTHH---HHHHHHTTCEEEEEC--SSHHHHHHHCCS-SEEEEEEE
T ss_pred CCCCEEEEeCCCchhH---HHHHHHcCCEEEEeC--CCHHHHHHhccc-CceEEEEc
Confidence 5677777765544333 234556777776665 456667666654 55555543
No 117
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=31.22 E-value=1.6e+02 Score=24.98 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=28.8
Q ss_pred CCCCCEEEEECCCCChHHHHHH-HHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFL-GVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+. .+...|+.++.++.. ...+++...++. ++++|+..
T Consensus 115 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 176 (420)
T 1t3i_A 115 LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVV 176 (420)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEe
Confidence 4667777766554444332222 233456655444332 345566666543 45566554
No 118
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=31.19 E-value=1e+02 Score=27.51 Aligned_cols=78 Identities=13% Similarity=0.073 Sum_probs=49.1
Q ss_pred CeEEEEccchhHHHHHH-HHHHHHhhcCCeEEEccC-C---CHHHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCCC
Q 019348 235 DHVVLCVLPMFHVFGLS-VILYDQLQKGNCVVSMGK-F---DIEMALRAIEKYR-----VTVWWVVPPIILALAKNSLVR 304 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~~ 304 (342)
--+++...|+.+...+. ..+..+|..|.++++=+. . ....+.+++.+.+ ++++......-..|++++
T Consensus 142 ~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~--- 218 (486)
T 1t90_A 142 IGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHP--- 218 (486)
T ss_dssp CSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCT---
T ss_pred cCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCC---
Confidence 34667777776543332 347789999999998543 3 3466777777753 234444445566777664
Q ss_pred ccCCCCceEEEeeccc
Q 019348 305 KFDISSLKLVGSGAAP 320 (342)
Q Consensus 305 ~~~l~~lr~~~~gG~~ 320 (342)
.++.+.++|+.
T Consensus 219 -----~v~~I~fTGS~ 229 (486)
T 1t90_A 219 -----EIKAISFVGSK 229 (486)
T ss_dssp -----TEEEEEEESCH
T ss_pred -----CCCEEEEeCCH
Confidence 47777777753
No 119
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.17 E-value=2.8e+02 Score=24.64 Aligned_cols=33 Identities=9% Similarity=0.205 Sum_probs=22.3
Q ss_pred CCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC
Q 019348 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP 111 (342)
Q Consensus 78 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 111 (342)
.|.+|+|...+...+-++-+ +..+|..++.+..
T Consensus 331 ~GKrv~i~~~~~~~~~l~~~-L~ElGmevv~~gt 363 (483)
T 3pdi_A 331 EGKRVLLYTGGVKSWSVVSA-LQDLGMKVVATGT 363 (483)
T ss_dssp TTCEEEEECSSSCHHHHHHH-HHHHTCEEEEECB
T ss_pred cCCEEEEECCCchHHHHHHH-HHHCCCEEEEEec
Confidence 37889998877655544433 4789988776643
No 120
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=31.08 E-value=1.6e+02 Score=24.41 Aligned_cols=77 Identities=9% Similarity=0.138 Sum_probs=46.8
Q ss_pred cceeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 53 ESLSFSQFKSIVIK---VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~---la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
..+++.+....... ..+.|...++++|++|+|...-+.-..++.+|- ..|+.++.++. +++. .+.++..+++.
T Consensus 138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~-~~~~~~lGa~~ 213 (340)
T 3s2e_A 138 DKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAK-LNLARRLGAEV 213 (340)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHH-HHHHHHTTCSE
T ss_pred CCCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHH-HHHHHHcCCCE
Confidence 46777775432222 223455668999999999887445555555554 56886665543 3333 34567778777
Q ss_pred EEEc
Q 019348 130 VITV 133 (342)
Q Consensus 130 vi~~ 133 (342)
++..
T Consensus 214 ~i~~ 217 (340)
T 3s2e_A 214 AVNA 217 (340)
T ss_dssp EEET
T ss_pred EEeC
Confidence 7643
No 121
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=31.04 E-value=1.4e+02 Score=25.09 Aligned_cols=78 Identities=9% Similarity=0.026 Sum_probs=45.9
Q ss_pred cceeHHHHH---HHHHH---HHHHHHH--cCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhh
Q 019348 53 ESLSFSQFK---SIVIK---VSHSFRH--LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD 124 (342)
Q Consensus 53 ~~~Ty~~l~---~~~~~---la~~L~~--~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 124 (342)
..+++.+.. ..... ..+.|.+ .++++|++|+|...-..-..++.+|-...|+.++.++. +++. ...++.
T Consensus 153 ~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~-~~~~~~ 229 (359)
T 1h2b_A 153 KDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEK-LKLAER 229 (359)
T ss_dssp TTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHH-HHHHHH
T ss_pred CCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHH-HHHHHH
Confidence 357777654 11111 2234555 68999999999998444555555554432876655543 2333 344567
Q ss_pred cCceEEEEc
Q 019348 125 SNPKLVITV 133 (342)
Q Consensus 125 ~~~~~vi~~ 133 (342)
.+++.++-.
T Consensus 230 lGa~~vi~~ 238 (359)
T 1h2b_A 230 LGADHVVDA 238 (359)
T ss_dssp TTCSEEEET
T ss_pred hCCCEEEec
Confidence 788877653
No 122
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=30.98 E-value=1.1e+02 Score=25.91 Aligned_cols=79 Identities=16% Similarity=0.106 Sum_probs=45.3
Q ss_pred ceeHHHHHHHH--HHHH-HHHHH-cCCCCC-CEEEEECCCC-ChHHHHHHHHHHhCCeEeccC-CCCCHHHHHHHhhhcC
Q 019348 54 SLSFSQFKSIV--IKVS-HSFRH-LGITKK-DVVLIFAPNS-IHFPICFLGVIAIGAIASTAN-PVYTVSELSKQVKDSN 126 (342)
Q Consensus 54 ~~Ty~~l~~~~--~~la-~~L~~-~g~~~g-~~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~ 126 (342)
.+++.+..... -..| +.|.+ .++++| ++|+|....+ .-..++.+| ...|+..+.+. .....++....++..+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqla-k~~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIG-KLLNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHH-HHHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHH-HHCCCEEEEEecCccccHHHHHHHHhcC
Confidence 57887654332 1222 33444 388999 9999998755 444455554 45787554443 2222233344556778
Q ss_pred ceEEEEc
Q 019348 127 PKLVITV 133 (342)
Q Consensus 127 ~~~vi~~ 133 (342)
++.++..
T Consensus 217 a~~vi~~ 223 (364)
T 1gu7_A 217 ATQVITE 223 (364)
T ss_dssp CSEEEEH
T ss_pred CeEEEec
Confidence 8877653
No 123
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=30.91 E-value=1.5e+02 Score=24.86 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=25.6
Q ss_pred CCCCCEEEEECCCCChHHHHHHH-HHHhCCeEeccCCC------CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTANPV------YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+.. +...|+.++.++.. ...+++...++. ++++|+..
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEe
Confidence 45667666655444333332222 23456555444432 223444444432 44555543
No 124
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=30.79 E-value=1.9e+02 Score=23.94 Aligned_cols=79 Identities=8% Similarity=0.021 Sum_probs=53.2
Q ss_pred ceeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEC-CCC-ChHHHHHHHHHHhCCeEeccCCCC-------CHHHHHHH
Q 019348 54 SLSFSQFKSIVIKVSHSFRHL---GITKKDVVLIFA-PNS-IHFPICFLGVIAIGAIASTANPVY-------TVSELSKQ 121 (342)
Q Consensus 54 ~~Ty~~l~~~~~~la~~L~~~---g~~~g~~V~i~~-~n~-~~~~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~ 121 (342)
.+|-.|+.. .-.+|..|++. ..-+|..|+.++ .+| ..-+..-.|+.++|+-++.+++.. +..+-...
T Consensus 9 dls~~ei~~-ll~~A~~lk~~~~~~~L~gk~la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarv 87 (304)
T 3r7f_A 9 ELSTEEIKD-LLQTAQELKSGKTDNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRT 87 (304)
T ss_dssp GSCHHHHHH-HHHHHHHHHTTCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHH
T ss_pred hCCHHHHHH-HHHHHHHHHcCCCCccCCCCEEEEEecCCChhHHHhHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHH
Confidence 455555544 33455566542 223577777665 444 456678899999999999988753 44667778
Q ss_pred hhhcCceEEEEc
Q 019348 122 VKDSNPKLVITV 133 (342)
Q Consensus 122 l~~~~~~~vi~~ 133 (342)
+...++++|++-
T Consensus 88 Ls~~~~D~iviR 99 (304)
T 3r7f_A 88 LESIGVDVCVIR 99 (304)
T ss_dssp HHHHTCCEEEEE
T ss_pred HHHhcCCEEEEe
Confidence 888888888764
No 125
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=30.77 E-value=1.5e+02 Score=25.09 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=37.2
Q ss_pred HHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC-eEeccCCCCCHHHHHHHhhhcCceEEEE
Q 019348 70 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 70 ~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 132 (342)
.+...++++|++|+|... +.--..+...+...|+ .++.++.. ++ -..+++..+++.++.
T Consensus 174 ~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~--~~-~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQ--AT-KRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC--HH-HHHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC--HH-HHHHHHHcCCCEEEC
Confidence 356668999999999987 5434444444456787 56555432 33 344566677776653
No 126
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=30.74 E-value=93 Score=25.28 Aligned_cols=59 Identities=12% Similarity=0.180 Sum_probs=40.7
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 92 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~ 92 (342)
.|+.+.+.+ ..|+...+...|+. ...|..++.+++.+.+..|.+.|.+ ..++.=|+...
T Consensus 18 ltv~~~i~~---~lP~~~~iy~~D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~~----~IVIACNTa~~ 80 (269)
T 3ist_A 18 LTVVREVLK---QLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIK----MLVIACNTATA 80 (269)
T ss_dssp HHHHHHHHH---HCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHHTTCS----EEEECCHHHHH
T ss_pred HHHHHHHHH---HCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCCccH
Confidence 455555544 45777777766533 6789999999999999999987653 44444455444
No 127
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=30.49 E-value=89 Score=26.28 Aligned_cols=61 Identities=21% Similarity=0.196 Sum_probs=35.1
Q ss_pred HHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC--C---CHHHHHHHhhhcCceEEEEc
Q 019348 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV--Y---TVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 69 ~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~---~~~~l~~~l~~~~~~~vi~~ 133 (342)
..++..++++||.|++..+.... ...++...|+.++.++.. . ..+++...++. ++++|+..
T Consensus 66 ~~l~~l~~~~gd~Vi~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 131 (373)
T 3frk_A 66 LILKGYDIGFGDEVIVPSNTFIA---TALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAV 131 (373)
T ss_dssp HHHHHTTCCTTCEEEEETTSCTH---HHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-TEEEEEEE
T ss_pred HHHHHcCCCCcCEEEECCCCcHH---HHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-CCeEEEEE
Confidence 33445567888988776554444 334466778766655433 1 44555555544 56666643
No 128
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=30.34 E-value=1e+02 Score=20.13 Aligned_cols=33 Identities=12% Similarity=0.232 Sum_probs=16.5
Q ss_pred CHHHHHhhhcccCCCceEEEeCCCCcceeHHHHHH
Q 019348 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKS 62 (342)
Q Consensus 28 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~ 62 (342)
.|.+.+.......|+...++.. ++..+|+.+.+
T Consensus 43 ~L~~~l~~~~~~~~~~~V~I~a--D~~~~y~~vv~ 75 (99)
T 2pfu_A 43 TMITALNALTEGKKDTTIFFRA--DKTVDYETLMK 75 (99)
T ss_dssp SHHHHHHHHSSSCCSSCEEEEE--CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEc--CCCCCHHHHHH
Confidence 3445555544445555555544 44555555443
No 129
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=30.08 E-value=2.2e+02 Score=23.43 Aligned_cols=91 Identities=14% Similarity=-0.014 Sum_probs=55.2
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (342)
.++.+-..+.+-+=|+++--. ..+...+.+.|. ++|+.|.. ...+-.-..+.++|...|.-++.+-|...+.....
T Consensus 26 ~~i~~K~E~~~ptGSfK~R~a--~~~i~~a~~~g~~~~~~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 102 (316)
T 1y7l_A 26 GNVVVKIEGRNPSYSVKCRIG--ANMVWQAEKDGTLTKGKEIVD-ATSGNTGIALAYVAAARGYKITLTMPETMSLERKR 102 (316)
T ss_dssp TCEEEEETTSSGGGBTHHHHH--HHHHHHHHHTTSSCTTCEEEE-SCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHH
T ss_pred CEEEEEeccCCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 456665554444555555432 222233344454 55655444 45566666777778899986655544444456677
Q ss_pred HhhhcCceEEEEccc
Q 019348 121 QVKDSNPKLVITVPE 135 (342)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (342)
.++..++++++++..
T Consensus 103 ~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 103 LLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEeCCC
Confidence 888899999998764
No 130
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=30.03 E-value=2.2e+02 Score=23.64 Aligned_cols=75 Identities=17% Similarity=0.232 Sum_probs=43.4
Q ss_pred cceeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 53 ESLSFSQFKSIVIK---VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~---la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
..+++.+....... .-+.|.+.++++|++|+|...-+.-..++.+|- ..|+.++.+.. +++.+. .++..+++.
T Consensus 136 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~ 211 (339)
T 1rjw_A 136 DNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-LAKELGADL 211 (339)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-HHHHTTCSE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHHCCCCE
Confidence 35677664322111 123445568999999999998555555555554 56886665554 333333 345566665
Q ss_pred EE
Q 019348 130 VI 131 (342)
Q Consensus 130 vi 131 (342)
++
T Consensus 212 ~~ 213 (339)
T 1rjw_A 212 VV 213 (339)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 131
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=29.85 E-value=1.5e+02 Score=25.99 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=46.7
Q ss_pred cceeHHHHHHHHHH--HHH-HHHH---cCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcC
Q 019348 53 ESLSFSQFKSIVIK--VSH-SFRH---LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSN 126 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~--la~-~L~~---~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 126 (342)
..+++.+....... .|. .|.+ .++++|++|+|....+.--..+...+...|+..+.+.. +++. .+.++..+
T Consensus 197 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~--~~~~-~~~~~~lG 273 (456)
T 3krt_A 197 DHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS--SPQK-AEICRAMG 273 (456)
T ss_dssp TTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHH-HHHHHHHT
T ss_pred CCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC--CHHH-HHHHHhhC
Confidence 45777775532222 222 2322 58899999999987665555555555677886665542 3444 34557778
Q ss_pred ceEEEE
Q 019348 127 PKLVIT 132 (342)
Q Consensus 127 ~~~vi~ 132 (342)
++.++.
T Consensus 274 a~~vi~ 279 (456)
T 3krt_A 274 AEAIID 279 (456)
T ss_dssp CCEEEE
T ss_pred CcEEEe
Confidence 877764
No 132
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=29.26 E-value=1.5e+02 Score=22.18 Aligned_cols=51 Identities=12% Similarity=0.008 Sum_probs=30.1
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
.-+|+.++.+.+.++|..+.+..-.+...+.+....+--.++..++- .+|.
T Consensus 7 ~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~-~L~~ 57 (177)
T 3ohp_A 7 VMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLAR-QIHL 57 (177)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHH-TCCS
T ss_pred EeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHH-HcCC
Confidence 35899999999999999997653212213444444443333333333 3443
No 133
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=29.02 E-value=2e+02 Score=24.00 Aligned_cols=53 Identities=17% Similarity=0.101 Sum_probs=32.5
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC--------CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV--------YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~vi~~ 133 (342)
.++||.|++..+.... ...++...|+.++.++.. ...+++...++. ++++++.
T Consensus 111 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~ 171 (391)
T 4dq6_A 111 TKANDKIMIQEPVYSP---FNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILC 171 (391)
T ss_dssp SCTTCEEEECSSCCTH---HHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCEEEEcCCCCHH---HHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEE
Confidence 3577887765443333 334556778776666544 466778887776 6666543
No 134
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=28.74 E-value=1.4e+02 Score=26.75 Aligned_cols=79 Identities=14% Similarity=-0.018 Sum_probs=49.2
Q ss_pred CCeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCC
Q 019348 234 LDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVVPPIILALAKNSLV 303 (342)
Q Consensus 234 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~ 303 (342)
+--++....|+.+...+.. -+..+|.+|.++++=+ +. ....+.+++.+.+ ++++..-+..-..|++++
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~-- 223 (495)
T 3b4w_A 146 PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNP-- 223 (495)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCT--
T ss_pred cCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCC--
Confidence 3357777788766555433 4678999999999853 33 3456777777752 233333334556676554
Q ss_pred CccCCCCceEEEeeccc
Q 019348 304 RKFDISSLKLVGSGAAP 320 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~ 320 (342)
.++.+.++|+.
T Consensus 224 ------~v~~I~FTGS~ 234 (495)
T 3b4w_A 224 ------DIDMFTFTGSS 234 (495)
T ss_dssp ------TCCEEEEESCH
T ss_pred ------CcCEEEEeCCH
Confidence 46677766643
No 135
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=28.73 E-value=1.7e+02 Score=23.46 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=52.4
Q ss_pred eEEEEccch--hHHHHHHHHHHHHhhcCCeEEEc-cCCCHHHHHHHHHhccceEEEecH------HHHHHHHcCCCCCcc
Q 019348 236 HVVLCVLPM--FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVP------PIILALAKNSLVRKF 306 (342)
Q Consensus 236 d~~~~~~p~--~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P------~~l~~l~~~~~~~~~ 306 (342)
.++++..+- .|..|....-..--..|..++.. ....++.+.+.++++++.++.++- ..+..+++.......
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~ 203 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGI 203 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCC
Confidence 344444433 67777644444445678887644 456789999999999998877642 223333333222211
Q ss_pred CCCCceEEEeecccCCHHHH
Q 019348 307 DISSLKLVGSGAAPLGKELM 326 (342)
Q Consensus 307 ~l~~lr~~~~gG~~l~~~~~ 326 (342)
.+ .+++||...+++..
T Consensus 204 ---~~-~v~vGG~~~~~~~~ 219 (258)
T 2i2x_B 204 ---KI-PFACGGGAVNQDFV 219 (258)
T ss_dssp ---CC-CEEEESTTCCHHHH
T ss_pred ---CC-cEEEECccCCHHHH
Confidence 23 37788888886543
No 136
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=28.56 E-value=1e+02 Score=25.72 Aligned_cols=56 Identities=16% Similarity=0.030 Sum_probs=32.8
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+..+.+......+...|+.++.++.. ...+++...++. ++++++..
T Consensus 86 ~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 145 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQ 145 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECC
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEE
Confidence 468888776655555544444444567766555433 255677776653 45666654
No 137
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=28.38 E-value=2.3e+02 Score=22.66 Aligned_cols=82 Identities=9% Similarity=0.002 Sum_probs=56.9
Q ss_pred cceeHHHHHHHHHHHHHHHHHc--CC----CCCCEEEEECCCC--ChHHHHH--HHHHHhCCeEeccCCCCCHHHHHHHh
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHL--GI----TKKDVVLIFAPNS--IHFPICF--LGVIAIGAIASTANPVYTVSELSKQV 122 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~--g~----~~g~~V~i~~~n~--~~~~~~~--lA~~~~G~~~v~l~~~~~~~~l~~~l 122 (342)
..++..|.+..+..+...+... .+ +.+.+|++.+..+ .+.-..+ ..+-..|.-++-+.+..+.+++...+
T Consensus 91 g~~~v~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~ 170 (258)
T 2i2x_B 91 GVIFLPNVMMSADAMLEGIEYCKENSGATPKTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAV 170 (258)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHTTTSSCCCCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 5788888777777776666321 11 2344666666543 3333333 34447888888898899999999999
Q ss_pred hhcCceEEEEcc
Q 019348 123 KDSNPKLVITVP 134 (342)
Q Consensus 123 ~~~~~~~vi~~~ 134 (342)
+..+|++|..+.
T Consensus 171 ~~~~~d~V~lS~ 182 (258)
T 2i2x_B 171 QKEKPIMLTGTA 182 (258)
T ss_dssp HHHCCSEEEEEC
T ss_pred HHcCCCEEEEEe
Confidence 999999998764
No 138
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=28.27 E-value=1.4e+02 Score=26.78 Aligned_cols=77 Identities=14% Similarity=0.036 Sum_probs=48.6
Q ss_pred CeEEEEccchhHHHHHH-HHHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCCC
Q 019348 235 DHVVLCVLPMFHVFGLS-VILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVVPPIILALAKNSLVR 304 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~~ 304 (342)
--++....|+.+...+. ..+..+|.+|.++++=+ .. ....+.+++.+.+ ++++......-..|.+++
T Consensus 158 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~--- 234 (501)
T 1uxt_A 158 LGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD--- 234 (501)
T ss_dssp CSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCT---
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCC---
Confidence 35777778877654443 34778999999999854 33 3466777777752 233333334556677664
Q ss_pred ccCCCCceEEEeecc
Q 019348 305 KFDISSLKLVGSGAA 319 (342)
Q Consensus 305 ~~~l~~lr~~~~gG~ 319 (342)
.++.+.++|+
T Consensus 235 -----~vd~I~FTGS 244 (501)
T 1uxt_A 235 -----RVAAVSFTGS 244 (501)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEEeCc
Confidence 4667777774
No 139
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=28.23 E-value=1.8e+02 Score=24.53 Aligned_cols=53 Identities=23% Similarity=0.285 Sum_probs=29.2
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-------CCHHHHHHHhhhcCceEEEE
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-------YTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~ 132 (342)
++||.|++..+....+ ..++...|+.++.++.. ...+++...++..++++|++
T Consensus 111 ~~gd~vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 111 KPGDGVIIITPVYYPF---FMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp CTTCEEEECSSCCTHH---HHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred CCCCEEEEcCCCcHhH---HHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 4577766654433332 23445567666555432 45667777766445666664
No 140
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=28.11 E-value=2.3e+02 Score=25.01 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=25.5
Q ss_pred CCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCH----HHHHHHhhhc
Q 019348 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTV----SELSKQVKDS 125 (342)
Q Consensus 78 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~----~~l~~~l~~~ 125 (342)
.|.+|+|.......+-++-+- ..+|..++.+-..... +++.++++..
T Consensus 311 ~gkrv~i~~~~~~~~~l~~~L-~elG~~vv~v~~~~~~~~~~~~~~~ll~~~ 361 (458)
T 1mio_B 311 QGKKVALLGDPDEIIALSKFI-IELGAIPKYVVTGTPGMKFQKEIDAMLAEA 361 (458)
T ss_dssp TTCEEEEEECHHHHHHHHHHH-HTTTCEEEEEEESSCCHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCchHHHHHHHHH-HHCCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 477888888765444443333 3788866653322222 2344455554
No 141
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=28.00 E-value=1.1e+02 Score=23.18 Aligned_cols=44 Identities=18% Similarity=0.027 Sum_probs=30.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHH
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 97 (342)
--+|.+|+.+++.++|+.+.+.--. .+.|++...++--.++..|
T Consensus 12 vlis~~~I~~~i~rlA~eI~e~~~~-~~~vlvgIl~Gg~~fa~~L 55 (181)
T 3acd_A 12 VQISAEAIKKRVEELGGEIARDYQG-KTPHLICVLNGAFIFMADL 55 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTT-CCCEEEEEETTTHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHHHHHHhCC-CCcEEEEEecCcHHHHHHH
Confidence 4579999999999999999764212 3456666666655555444
No 142
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=28.00 E-value=1.5e+02 Score=26.78 Aligned_cols=78 Identities=15% Similarity=0.013 Sum_probs=49.0
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVV-PPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ .. ....+.+++.+.+ ++++... +..-..|.+++
T Consensus 179 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~-- 256 (517)
T 2o2p_A 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHP-- 256 (517)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCT--
T ss_pred CccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCC--
Confidence 347777788766555533 4678899999999854 33 3466777777753 2333332 23566777765
Q ss_pred CccCCCCceEEEeeccc
Q 019348 304 RKFDISSLKLVGSGAAP 320 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~ 320 (342)
.++.+.+.|+.
T Consensus 257 ------~v~~V~FTGS~ 267 (517)
T 2o2p_A 257 ------DVRKIGFTGST 267 (517)
T ss_dssp ------TCCEEEEESCH
T ss_pred ------CCCEEEEECCH
Confidence 46677776643
No 143
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.96 E-value=1.4e+02 Score=20.04 Aligned_cols=54 Identities=13% Similarity=0.077 Sum_probs=30.5
Q ss_pred CCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEccc
Q 019348 79 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (342)
Q Consensus 79 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 135 (342)
+.+|+++-++....-..--.+...|..+.. ..+.++....++..+|+++++|-.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~---~~~~~~a~~~l~~~~~dlvi~d~~ 60 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATTVL---AADGVDALELLGGFTPDLMICDIA 60 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEE---ESCHHHHHHHHTTCCCSEEEECCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceEEE---eCCHHHHHHHHhcCCCCEEEEecC
Confidence 446777655543333333333444655443 234556666777788888888744
No 144
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=27.85 E-value=2e+02 Score=23.82 Aligned_cols=59 Identities=8% Similarity=-0.142 Sum_probs=38.8
Q ss_pred HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEE
Q 019348 72 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 132 (342)
+..++++|++|+|....+.--..+...+...|+.++.+.. +++++....+..+.+.++.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG--GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHcCCCEEEE
Confidence 4558999999999988665444555555578886665543 3455554446777776654
No 145
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=27.83 E-value=2.4e+02 Score=24.37 Aligned_cols=56 Identities=7% Similarity=-0.078 Sum_probs=25.4
Q ss_pred CCCCCEEEEECCCCChHHHHH-HHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICF-LGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+ ..+...|..++.++.. ..+++...++. ++++|+++
T Consensus 117 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~ai~~-~t~~v~le 173 (414)
T 3ndn_A 117 LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-DLSQWERALSV-PTQAVFFE 173 (414)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHTSS-CCSEEEEE
T ss_pred hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 456666655433222221111 1123356655555443 44555555543 44555543
No 146
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=27.59 E-value=1e+02 Score=25.90 Aligned_cols=56 Identities=16% Similarity=0.030 Sum_probs=29.3
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++.-+..+.+......+...|+.++.++.. ...+++...++. ++++|+..
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 145 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQ 145 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECC
T ss_pred CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-CCeEEEEe
Confidence 457777666554433333332223467665554432 345667666653 56666654
No 147
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=27.58 E-value=1.3e+02 Score=26.71 Aligned_cols=88 Identities=10% Similarity=0.003 Sum_probs=51.3
Q ss_pred eEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCCH---HHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCCCc
Q 019348 236 HVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFDI---EMALRAIEKYR-----VTVWWVVPPIILALAKNSLVRK 305 (342)
Q Consensus 236 d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~~~ 305 (342)
-++....|+.+...+.. .+..+|..|.++++=+ +..| ..+.+++.+.+ ++++...+.....|++++
T Consensus 128 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~---- 203 (462)
T 3etf_A 128 GVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDP---- 203 (462)
T ss_dssp SEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTST----
T ss_pred cEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCC----
Confidence 46666667655544423 3788999999999864 3333 45556666642 344444456667777665
Q ss_pred cCCCCceEEEeecccCC-HHHHHHHHH
Q 019348 306 FDISSLKLVGSGAAPLG-KELMEDCQK 331 (342)
Q Consensus 306 ~~l~~lr~~~~gG~~l~-~~~~~~~~~ 331 (342)
.++.+.++|+.-- ..+.+...+
T Consensus 204 ----~v~~v~fTGS~~~g~~i~~~aa~ 226 (462)
T 3etf_A 204 ----RIAAVTVTGSVRAGAAIGAQAGA 226 (462)
T ss_dssp ----TEEEEEEESCHHHHHHHHHHHHH
T ss_pred ----CCCEEEEeCCchHHHHHHHHHhc
Confidence 4666777665422 333444433
No 148
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=27.57 E-value=1.4e+02 Score=24.24 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=39.0
Q ss_pred CHHHHHhhhcccCCCceEEEeCCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCh
Q 019348 28 SMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH 91 (342)
Q Consensus 28 ~l~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~ 91 (342)
|+.+.+. +.-|+...+...|+. ..-++.++.+++.+.+..|.+.|.+ ..++.=|+..
T Consensus 38 tv~~~i~---~~lP~e~~iy~~D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~d----~IVIACNTa~ 98 (274)
T 3uhf_A 38 SVLKSLY---EARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQID----MLIIACNTAS 98 (274)
T ss_dssp HHHHHHH---HTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCS----EEEECCHHHH
T ss_pred HHHHHHH---HHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCChh
Confidence 4444444 445777777766533 5789999999999999999887653 4444445544
No 149
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=27.48 E-value=1.4e+02 Score=25.09 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=44.8
Q ss_pred cceeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC-eEeccCCCCCHHHHHHHhhhcCce
Q 019348 53 ESLSFSQFKSIVIK---VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQVKDSNPK 128 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~---la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 128 (342)
..+++.+....... ..+.++..++++|++|+|... +.--..+...+...|+ .++.++.. + +-..+++..+++
T Consensus 138 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~--~-~~~~~~~~lGa~ 213 (352)
T 3fpc_A 138 KEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSR--K-HCCDIALEYGAT 213 (352)
T ss_dssp TTSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCC--H-HHHHHHHHHTCC
T ss_pred CCCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCC--H-HHHHHHHHhCCc
Confidence 35677765432111 123356678999999999975 5433344444456787 45555432 3 334566677887
Q ss_pred EEEE
Q 019348 129 LVIT 132 (342)
Q Consensus 129 ~vi~ 132 (342)
.++.
T Consensus 214 ~vi~ 217 (352)
T 3fpc_A 214 DIIN 217 (352)
T ss_dssp EEEC
T ss_pred eEEc
Confidence 7764
No 150
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=27.47 E-value=1.6e+02 Score=20.46 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=31.9
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEecc--CCCCCHHHH
Q 019348 68 SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA--NPVYTVSEL 118 (342)
Q Consensus 68 a~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l 118 (342)
+.+|.+.|+..+..+.+-..+..+.+.++-=++++|...+.+ .+..+..+.
T Consensus 47 ~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~~ 99 (119)
T 1ofu_X 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAAR 99 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHH
T ss_pred HHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHHH
Confidence 556777788777666666566667777777777777644333 234444443
No 151
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=27.44 E-value=2.1e+02 Score=24.08 Aligned_cols=56 Identities=14% Similarity=0.183 Sum_probs=33.0
Q ss_pred HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-----CCHHHHHHHhhhcCceEEE
Q 019348 72 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVI 131 (342)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 131 (342)
+..++++||.|++..+..... ..++...|+.++.++.. ...+++...++. ++++|+
T Consensus 71 ~~l~~~~gd~Vi~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~ 131 (388)
T 1b9h_A 71 QVMGVGPGTEVIVPAFTFISS---SQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIM 131 (388)
T ss_dssp HHTTCCTTCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEEC
T ss_pred HHcCCCCcCEEEECCCccHHH---HHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEE
Confidence 334567888887765554443 34556778766555432 356677766643 455555
No 152
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=27.21 E-value=66 Score=23.07 Aligned_cols=40 Identities=5% Similarity=-0.093 Sum_probs=22.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
.++...|.+.|+.+++.|.++|..+.....+...+...|.
T Consensus 66 ~~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~ 105 (148)
T 2fsx_A 66 AELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGI 105 (148)
T ss_dssp HHHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred HHHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCC
Confidence 3444445555777788888888888777666666677775
No 153
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=26.98 E-value=1.9e+02 Score=21.34 Aligned_cols=16 Identities=6% Similarity=0.113 Sum_probs=9.0
Q ss_pred HHHHhhhcCceEEEEc
Q 019348 118 LSKQVKDSNPKLVITV 133 (342)
Q Consensus 118 l~~~l~~~~~~~vi~~ 133 (342)
+++.|+.-.+.+|++.
T Consensus 117 ~EqALrsG~~~aVl~W 132 (161)
T 1oft_A 117 SCEALRLGRSHTVVSW 132 (161)
T ss_dssp HHHHHHTTCEEEEEEC
T ss_pred HHHHHhcCCccEEEEC
Confidence 4455555566666654
No 154
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=26.95 E-value=1.8e+02 Score=26.16 Aligned_cols=77 Identities=19% Similarity=0.116 Sum_probs=46.9
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCCH----HHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFDI----EMALRAIEKYR-----VTVWWVV-PPIILALAKNSL 302 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~~----~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~ 302 (342)
--++....|+.+...+.. .+..+|.+|.++++=+ +..| ..+.+++.+.+ ++++... +..-..|++++
T Consensus 149 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p- 227 (508)
T 3r64_A 149 KGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHA- 227 (508)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCS-
T ss_pred ceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCC-
Confidence 356777777766655533 4788999999999854 3443 45566666653 2333332 34566776654
Q ss_pred CCccCCCCceEEEeecc
Q 019348 303 VRKFDISSLKLVGSGAA 319 (342)
Q Consensus 303 ~~~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 228 -------~vd~I~fTGS 237 (508)
T 3r64_A 228 -------VPKLISFTGS 237 (508)
T ss_dssp -------SCSEEEEESC
T ss_pred -------CccEEEEECC
Confidence 3556666664
No 155
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=26.90 E-value=1.2e+02 Score=26.35 Aligned_cols=50 Identities=22% Similarity=0.153 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEECCCCCh-HH-HHHHHHHHhCCeEecc
Q 019348 60 FKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIH-FP-ICFLGVIAIGAIASTA 109 (342)
Q Consensus 60 l~~~~~~la~~L~~~--g~~~g~~V~i~~~n~~~-~~-~~~lA~~~~G~~~v~l 109 (342)
+..+.+++|..+.+. ++++|+.|.|..+.... ++ .+.-++..+|+-++.+
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v 57 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTV 57 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEE
Confidence 356778888888664 77999999999985533 32 4556788899977754
No 156
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=26.89 E-value=1.5e+02 Score=21.27 Aligned_cols=49 Identities=18% Similarity=0.030 Sum_probs=26.0
Q ss_pred CEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 80 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 80 ~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
|.|.++.| .....-++..|...|.-.+.+.+....+++.+..+..+..+
T Consensus 72 Dlvii~vp-~~~v~~v~~~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi~~ 120 (145)
T 2duw_A 72 DMVDVFRN-SEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSV 120 (145)
T ss_dssp SEEECCSC-STHHHHHHHHHHHHTCCEEECCTTCCCHHHHHHHHTTTCEE
T ss_pred CEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCChHHHHHHHHHHHcCCEE
Confidence 44555444 33444444455566654455555555566666666655443
No 157
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=26.74 E-value=1.2e+02 Score=27.06 Aligned_cols=76 Identities=22% Similarity=0.101 Sum_probs=45.7
Q ss_pred eEEEEccchhHHHHHH-HHHHHHhhcCCeEEEcc-CCCH---HHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCCCc
Q 019348 236 HVVLCVLPMFHVFGLS-VILYDQLQKGNCVVSMG-KFDI---EMALRAIEKYR-----VTVWWVVPPIILALAKNSLVRK 305 (342)
Q Consensus 236 d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~~~ 305 (342)
-++....|+.+..... ..+..+|.+|.++++=+ +..| ..+.+++.+.+ ++++...+..-+.|++++
T Consensus 141 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~---- 216 (490)
T 3ju8_A 141 GVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHR---- 216 (490)
T ss_dssp SEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCT----
T ss_pred CEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCC----
Confidence 4566666665544332 34678899999999854 3333 55566666652 344444456667777665
Q ss_pred cCCCCceEEEeecc
Q 019348 306 FDISSLKLVGSGAA 319 (342)
Q Consensus 306 ~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 217 ----~v~~V~fTGS 226 (490)
T 3ju8_A 217 ----GLDGLFFTGS 226 (490)
T ss_dssp ----TCSEEEEESC
T ss_pred ----CcCEEEEECc
Confidence 3556666663
No 158
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=26.72 E-value=1.8e+02 Score=24.71 Aligned_cols=57 Identities=21% Similarity=0.181 Sum_probs=24.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC--C--CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V--YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~--~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+.... ....-++...|+.++.++. . ...+++...++..++++|+..
T Consensus 83 ~~~gd~Vl~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 143 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFG-YLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMV 143 (416)
T ss_dssp CCTTCEEEEEESSHHH-HHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEecCCccc-HHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEE
Confidence 3456665555432111 0122234445554433322 2 244556666654445555443
No 159
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=26.56 E-value=2.6e+02 Score=23.28 Aligned_cols=54 Identities=20% Similarity=0.207 Sum_probs=33.2
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-------CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-------YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~ 133 (342)
.++||.|++..+.. .....++...|+.++.++.. ...+++...+ ..++++|+..
T Consensus 103 ~~~gd~vl~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i~ 163 (383)
T 3kax_A 103 TKENESVLVQPPIY---PPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLLC 163 (383)
T ss_dssp CCTTCEEEECSSCC---HHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEEE
T ss_pred CCCCCEEEEcCCCc---HHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEEe
Confidence 45788877654433 33335566778877666542 4667787777 4466666543
No 160
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=26.27 E-value=1.3e+02 Score=25.02 Aligned_cols=77 Identities=4% Similarity=-0.062 Sum_probs=46.3
Q ss_pred eeHHHHHHHHHH---HHHHHHHc--CCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 55 LSFSQFKSIVIK---VSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 55 ~Ty~~l~~~~~~---la~~L~~~--g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
+++.+....... ..+.|.+. ++++|++|+|...-..-..++.+|-..-|+.++.++. +++ -..+++..+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~-~~~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDD-RLALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHH-HHHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHH-HHHHHHHcCCCE
Confidence 777776533322 22334443 7899999999987444555566655554666665543 333 344567788887
Q ss_pred EEEcc
Q 019348 130 VITVP 134 (342)
Q Consensus 130 vi~~~ 134 (342)
++...
T Consensus 220 ~i~~~ 224 (345)
T 3jv7_A 220 AVKSG 224 (345)
T ss_dssp EEECS
T ss_pred EEcCC
Confidence 77543
No 161
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=26.26 E-value=1.8e+02 Score=24.86 Aligned_cols=55 Identities=11% Similarity=0.041 Sum_probs=30.2
Q ss_pred CCCCCEEEEECCCCChHHHHHHH-HHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+.. +...|..++.++.+ .+++...++. ++++|+++
T Consensus 92 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~i~~-~~~~v~~~ 147 (412)
T 2cb1_A 92 LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE--PEAVREALSA-KTRAVFVE 147 (412)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS--HHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--HHHHHHHhcc-CCeEEEEe
Confidence 46788777765543222222221 34467766666554 6666666653 55666654
No 162
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=26.26 E-value=2.4e+02 Score=23.87 Aligned_cols=58 Identities=24% Similarity=0.323 Sum_probs=31.7
Q ss_pred HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccC--C---CCCHHHHHHHhhhcCceEEEEc
Q 019348 72 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--P---VYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~---~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+..++++||.|++..+.... ..-++...|+.++.++ + ....+++...++. ++++|+..
T Consensus 96 ~~~~~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 158 (399)
T 2oga_A 96 RGLGIGPGDEVIVPSHTYIA---SWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPV 158 (399)
T ss_dssp HHTTCCTTCEEEEESSSCTH---HHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCB
T ss_pred HHhCCCCcCEEEECCCccHH---HHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEe
Confidence 33346778887776554433 3334556676554443 3 2345666666653 55666543
No 163
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=26.10 E-value=1.7e+02 Score=24.56 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=30.0
Q ss_pred CCCCCEEEEECCCCChHHHHH-HHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICF-LGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+ -.+...|+.++.++.. ...+++...++. ++++|+.+
T Consensus 110 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 171 (406)
T 1kmj_A 110 VRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE-KTRLLAIT 171 (406)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT-TEEEEEEE
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc-CCeEEEEe
Confidence 467888777655544333222 2234457655444332 235566666643 56666654
No 164
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=25.93 E-value=3e+02 Score=23.47 Aligned_cols=59 Identities=19% Similarity=0.261 Sum_probs=43.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChHHHHH--HHHHHhCCeEeccCCCCCH--HHHHHHhhhcCce
Q 019348 67 VSHSFRHLGITKKDVVLIFAPNSIHFPICF--LGVIAIGAIASTANPVYTV--SELSKQVKDSNPK 128 (342)
Q Consensus 67 la~~L~~~g~~~g~~V~i~~~n~~~~~~~~--lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~ 128 (342)
+...+++.++. .|....|.+.+-...+ .||+..|+.++.-.|.... ..+.+..++.+.-
T Consensus 130 i~~~~~~~~~d---VvV~~lp~gs~~aS~~YA~Aal~ag~~fvN~~P~~~~~~P~~~el~~~~g~p 192 (367)
T 1gr0_A 130 VVQALKEAKVD---VLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVP 192 (367)
T ss_dssp HHHHHHHTTCS---EEEECCCTTCHHHHHHHHHHHHHHTCEEEECSSCCSTTSHHHHHHHHHHTCE
T ss_pred HHHHHHHhCCc---EEEEeeeCCCcCHHHHHHHHHHHcCCceEecCCccccCCHHHHHHHHHcCCC
Confidence 66678887764 6777777775544433 5788889999999998766 6888888887754
No 165
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=25.92 E-value=2.9e+02 Score=24.97 Aligned_cols=31 Identities=3% Similarity=0.078 Sum_probs=17.9
Q ss_pred CCCEEEEECCCCChHHHHHHHHHHhCCeEecc
Q 019348 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (342)
Q Consensus 78 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 109 (342)
.|.+|+|...+...+-++-+- ..+|..++.+
T Consensus 363 ~GKrvaI~gd~~~~~~la~fL-~elGm~vv~v 393 (523)
T 3u7q_B 363 HGKRFALWGDPDFVMGLVKFL-LELGCEPVHI 393 (523)
T ss_dssp TTCEEEEECSHHHHHHHHHHH-HHTTCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHH-HHcCCEEEEE
Confidence 377888886544333333322 3788776655
No 166
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=25.87 E-value=1.3e+02 Score=24.19 Aligned_cols=40 Identities=13% Similarity=0.381 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCh-HHHHHHHHHHhCC
Q 019348 65 IKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGA 104 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~ 104 (342)
..+...+.+.|+.+++.|.++|..+.. ...+...+...|.
T Consensus 72 ~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~ 112 (280)
T 1urh_A 72 ETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGV 112 (280)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCC
Confidence 344555556666666677777765544 4444455555554
No 167
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=25.84 E-value=96 Score=26.04 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=33.5
Q ss_pred HHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-----CCHHHHHHHhhhcCceEEEE
Q 019348 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 69 ~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 132 (342)
..|+..++++||.|++..+.. .....++...|+.++.++.. ...+++...++. ++++|+.
T Consensus 65 ~al~~~~~~~gd~Vi~~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 129 (367)
T 3nyt_A 65 IVQMALGVGPGDEVITPGFTY---VATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIP 129 (367)
T ss_dssp HHHHHTTCCTTCEEEEESSSC---THHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCT-TEEEECC
T ss_pred HHHHHhCCCCcCEEEECCCcc---HHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCc-CCcEEEe
Confidence 344455678888887765533 33444566778766555432 244555555532 5556653
No 168
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=25.71 E-value=2.6e+02 Score=23.15 Aligned_cols=57 Identities=16% Similarity=0.096 Sum_probs=32.9
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++.-+.. ......-.+...|+.++.++.. ...+++...++..++++|+..
T Consensus 74 ~~~gd~vi~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 134 (384)
T 3zrp_A 74 LKPNDKILVVSNGV-FGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALT 134 (384)
T ss_dssp CCTTCEEEEECSSH-HHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEE
T ss_pred cCCCCEEEEecCCc-chHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEe
Confidence 56788877764422 1111222234567665555433 366788888877667777665
No 169
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=25.66 E-value=2.4e+02 Score=24.08 Aligned_cols=55 Identities=18% Similarity=0.079 Sum_probs=26.3
Q ss_pred CCCCEEEEECCCCChHHHHHH-HHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFL-GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+....+...+- ++...|+.++.++.. ..+++...++. ++++|+.+
T Consensus 99 ~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~t~~v~l~ 154 (404)
T 1e5e_A 99 KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-IPGEVKKHMKP-NTKIVYFE 154 (404)
T ss_dssp CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-STTHHHHHCCT-TEEEEEEE
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCC-CCcEEEEE
Confidence 566766665443333222111 345566666555443 34455555542 44555543
No 170
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=25.25 E-value=2.3e+02 Score=23.76 Aligned_cols=53 Identities=9% Similarity=0.105 Sum_probs=31.6
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC--C-----CCHHHHHHHhhhcCceEEEE
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V-----YTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~-----~~~~~l~~~l~~~~~~~vi~ 132 (342)
++||.|++..+.... ...++...|+.++.++. . ...+++...++..++++|+.
T Consensus 109 ~~gd~vl~~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l 168 (390)
T 1d2f_A 109 ETGEGVVIHTPAYDA---FYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLL 168 (390)
T ss_dssp CTTCEEEEEESCCHH---HHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEE
T ss_pred CCCCEEEEcCCCcHH---HHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEE
Confidence 567887776553333 33445567776554432 1 45677777776556777664
No 171
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=25.24 E-value=1.5e+02 Score=26.52 Aligned_cols=78 Identities=14% Similarity=0.035 Sum_probs=47.8
Q ss_pred CCeEEEEccchhHHHHHH-HHHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCC
Q 019348 234 LDHVVLCVLPMFHVFGLS-VILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVV-PPIILALAKNSL 302 (342)
Q Consensus 234 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~ 302 (342)
+--++....|+.+...+. .-+..+|.+|.++++=+ +. ....+.+++.+.+ ++++... +..-+.|.+++
T Consensus 148 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p- 226 (497)
T 3k2w_A 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESP- 226 (497)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCS-
T ss_pred CCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCC-
Confidence 335677778876665553 34778999999999854 33 3456666776653 2333331 23566676654
Q ss_pred CCccCCCCceEEEeecc
Q 019348 303 VRKFDISSLKLVGSGAA 319 (342)
Q Consensus 303 ~~~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 227 -------~vd~I~fTGS 236 (497)
T 3k2w_A 227 -------ITKMITMTGS 236 (497)
T ss_dssp -------SEEEEEEESC
T ss_pred -------CcCEEEEECc
Confidence 4666777664
No 172
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=24.95 E-value=2e+02 Score=25.08 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=36.1
Q ss_pred CCCCCEEEEECCCCChHHHHHH---------HHHHhCCeEeccCCC----CCHHHHHHHhhh-cCceEEEEcc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFL---------GVIAIGAIASTANPV----YTVSELSKQVKD-SNPKLVITVP 134 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~l---------A~~~~G~~~v~l~~~----~~~~~l~~~l~~-~~~~~vi~~~ 134 (342)
+++||.|++...........++ .+...|+.++.++.. ...+++...++. -++++|+++.
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 4688987765413333333222 234568877776653 466778887774 4678887765
No 173
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=24.94 E-value=1.5e+02 Score=26.62 Aligned_cols=78 Identities=12% Similarity=0.017 Sum_probs=47.5
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVV-PPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ .. ....+.+++.+.+ ++++... +..-+.|..++
T Consensus 152 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~-- 229 (503)
T 3iwj_A 152 IGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHP-- 229 (503)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCT--
T ss_pred CceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCC--
Confidence 346777788777665533 3678899999999854 33 3456666666652 2333332 24556676665
Q ss_pred CccCCCCceEEEeeccc
Q 019348 304 RKFDISSLKLVGSGAAP 320 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~ 320 (342)
.++.+.+.|+.
T Consensus 230 ------~v~~I~FTGS~ 240 (503)
T 3iwj_A 230 ------DVDKVAFTGSS 240 (503)
T ss_dssp ------TCCEEEEESCH
T ss_pred ------CccEEEEECcH
Confidence 35666666643
No 174
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=24.86 E-value=1.8e+02 Score=25.42 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=46.2
Q ss_pred cceeHHHHHHHHHHHHH---HHH---HcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcC
Q 019348 53 ESLSFSQFKSIVIKVSH---SFR---HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSN 126 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~---~L~---~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 126 (342)
..+++.+........+. .|. ..++++|++|+|....+.--..+...+...|+..+.+.. +++++ +.++..+
T Consensus 189 ~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~--~~~~~-~~~~~lG 265 (447)
T 4a0s_A 189 AHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS--SAQKE-AAVRALG 265 (447)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHHH-HHHHHTT
T ss_pred CCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHH-HHHHhcC
Confidence 45777776533222222 232 258899999999987565444455555577886665542 34443 3456677
Q ss_pred ceEEEE
Q 019348 127 PKLVIT 132 (342)
Q Consensus 127 ~~~vi~ 132 (342)
++.++.
T Consensus 266 a~~~i~ 271 (447)
T 4a0s_A 266 CDLVIN 271 (447)
T ss_dssp CCCEEE
T ss_pred CCEEEe
Confidence 776654
No 175
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=24.84 E-value=1.4e+02 Score=23.93 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=19.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCC-hHHHHHHHHHHhCC
Q 019348 66 KVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGA 104 (342)
Q Consensus 66 ~la~~L~~~g~~~g~~V~i~~~n~~-~~~~~~lA~~~~G~ 104 (342)
.++..+.+.|+.+++.|.++|..+. ....+...+...|.
T Consensus 68 ~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~ 107 (271)
T 1e0c_A 68 QLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107 (271)
T ss_dssp HHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcCC
Confidence 4444455555555556666665543 33333334444444
No 176
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=24.75 E-value=3e+02 Score=22.84 Aligned_cols=54 Identities=9% Similarity=-0.010 Sum_probs=31.3
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+.... ..-++...|+.++.++.. ...+++...++..++++++..
T Consensus 121 ~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 178 (397)
T 3f9t_A 121 NEHPKIIVPITAHFS---FEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGI 178 (397)
T ss_dssp CSSCEEEEETTCCTH---HHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEE
T ss_pred CCCeEEEECCcchhH---HHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEE
Confidence 457877776554433 333444557655555433 266778888876455555543
No 177
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=24.71 E-value=2.3e+02 Score=23.96 Aligned_cols=76 Identities=11% Similarity=-0.015 Sum_probs=44.6
Q ss_pred cceeHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC-eEeccCCCCCHHHHHHHhhhcCc
Q 019348 53 ESLSFSQFKSIVIKV--SH-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQVKDSNP 127 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~l--a~-~L-~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 127 (342)
..+++.+.......+ |. .+ +..++++|++|+|... +.--..+...+...|+ .++.++.... . .++++..++
T Consensus 164 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~--~-~~~a~~lGa 239 (378)
T 3uko_A 164 PTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSK--K-YETAKKFGV 239 (378)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTT--H-HHHHHTTTC
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH--H-HHHHHHcCC
Confidence 357777754432222 22 13 4568999999999987 5444444444456787 5666654332 2 235667777
Q ss_pred eEEEE
Q 019348 128 KLVIT 132 (342)
Q Consensus 128 ~~vi~ 132 (342)
+.++.
T Consensus 240 ~~vi~ 244 (378)
T 3uko_A 240 NEFVN 244 (378)
T ss_dssp CEEEC
T ss_pred cEEEc
Confidence 77664
No 178
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=24.64 E-value=2.8e+02 Score=23.04 Aligned_cols=54 Identities=9% Similarity=0.078 Sum_probs=30.4
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccC--C--CCCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--P--VYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~--~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+....+ ..++...|+.++.++ . ....+++...++..++++|++.
T Consensus 114 ~~gd~Vl~~~~~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 114 GPGRTALGFQPSYSMH---PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp STTCEEEEEESSCTHH---HHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred CCCCEEEEcCCChHHH---HHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEe
Confidence 4677777765544333 234556676554443 2 2345677776665456666653
No 179
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=24.59 E-value=3.6e+02 Score=24.77 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHhhcCCeEEEc-cCCCHHHHHHHHHhccceEEEecH----H--HHHHHHcCCCCCccCCCCceEEEee
Q 019348 245 FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVP----P--IILALAKNSLVRKFDISSLKLVGSG 317 (342)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P----~--~l~~l~~~~~~~~~~l~~lr~~~~g 317 (342)
.|..|....-...-..|..++.. ....++.+.+.++++++.++.++- + .+..+++....... .++ +++|
T Consensus 110 ~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~~~~diVgLS~l~t~~~~~m~~~i~~Lr~~g~---~i~-ViVG 185 (579)
T 3bul_A 110 VHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGF---TIP-LLIG 185 (579)
T ss_dssp CCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHHTTC---CSC-EEEE
T ss_pred CchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEecCCCCHHHHHHHHHHHHHcCC---CCe-EEEE
Confidence 67777644444445677777655 557889999999999998876652 1 22233332212121 343 6889
Q ss_pred cccCCHHHH
Q 019348 318 AAPLGKELM 326 (342)
Q Consensus 318 G~~l~~~~~ 326 (342)
|..++.+..
T Consensus 186 Ga~~~~~~a 194 (579)
T 3bul_A 186 GATTSKAHT 194 (579)
T ss_dssp STTCCHHHH
T ss_pred ccccchhhh
Confidence 988888654
No 180
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=24.59 E-value=1.8e+02 Score=24.17 Aligned_cols=55 Identities=9% Similarity=0.128 Sum_probs=34.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEecc--CC--CCCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA--NP--VYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~--~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+....+.- ++...|+.++.+ ++ ....+++...++..++++|++.
T Consensus 106 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYAM---SAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSCH---HHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHH---HHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 4678888877665544332 345667655544 43 2466788888877677777764
No 181
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=24.45 E-value=1.8e+02 Score=24.52 Aligned_cols=57 Identities=12% Similarity=-0.014 Sum_probs=27.7
Q ss_pred CCCCCEEEEECCCCChHHHHHHH-HHHhCCeEeccCCC-----CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+.. +-..|+.++.++.. ...+++...++. ++++|+..
T Consensus 110 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 172 (406)
T 3cai_A 110 AGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK-STRLVAVN 172 (406)
T ss_dssp GBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence 45677776655444333222222 22356655444332 245566666543 45565554
No 182
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=24.35 E-value=1.3e+02 Score=27.05 Aligned_cols=76 Identities=8% Similarity=0.025 Sum_probs=47.0
Q ss_pred eEEEEccchhHHHHHH-HHHHHHhhcCCeEEEccC-C---CHHHHHHHHHhcc-----ceEEEe-cHHHHHHHHcCCCCC
Q 019348 236 HVVLCVLPMFHVFGLS-VILYDQLQKGNCVVSMGK-F---DIEMALRAIEKYR-----VTVWWV-VPPIILALAKNSLVR 304 (342)
Q Consensus 236 d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~-~P~~l~~l~~~~~~~ 304 (342)
.++....|+.+...+. ..+..+|.+|.++++=+. . ....+.+++.+.+ ++++.. -+..-..|++++
T Consensus 175 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~--- 251 (516)
T 1uzb_A 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP--- 251 (516)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCT---
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCC---
Confidence 4677777776553332 347899999999998543 2 2356667777652 233333 234566777664
Q ss_pred ccCCCCceEEEeecc
Q 019348 305 KFDISSLKLVGSGAA 319 (342)
Q Consensus 305 ~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 252 -----~v~~I~FTGS 261 (516)
T 1uzb_A 252 -----RIRFINFTGS 261 (516)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEecCC
Confidence 4667777664
No 183
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=24.31 E-value=2.3e+02 Score=23.65 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=9.8
Q ss_pred CHHHHHHHhhhcCceEEEEc
Q 019348 114 TVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 114 ~~~~l~~~l~~~~~~~vi~~ 133 (342)
..+++.+.++..++++|+..
T Consensus 136 d~~~l~~~i~~~~~~~v~~~ 155 (393)
T 3kgw_A 136 TLQEVEEGLAQHKPVLLFLV 155 (393)
T ss_dssp CHHHHHHHHHHHCCSEEEEE
T ss_pred CHHHHHHHHhhCCCcEEEEe
Confidence 44555555554444544443
No 184
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=24.29 E-value=3.3e+02 Score=23.08 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=30.8
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC--C--CHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV--Y--TVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~--~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+....+...+..+...|+.++.++.. . ..+++...++. +++++++.
T Consensus 111 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 170 (423)
T 3lvm_A 111 KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-DTILVSIM 170 (423)
T ss_dssp TTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-TEEEEECC
T ss_pred cCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-CcEEEEEe
Confidence 357887776555444444443334557655544432 2 45667666654 55666654
No 185
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=24.28 E-value=1.9e+02 Score=24.31 Aligned_cols=56 Identities=13% Similarity=-0.050 Sum_probs=27.0
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEe--ccCCC--CCHHHHHHHhhh-cCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIAS--TANPV--YTVSELSKQVKD-SNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~--~~~~~l~~~l~~-~~~~~vi~~ 133 (342)
++||.|++..+..... ...-.+...|+.++ ++++. ...+++...++. -++++|+..
T Consensus 81 ~~gd~Vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~ 141 (392)
T 2z9v_A 81 SPDDVVLNLASGVYGK-GFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVC 141 (392)
T ss_dssp CTTCCEEEEESSHHHH-HHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCCEEEEecCCcccH-HHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEe
Confidence 5677766654422222 11112233565444 33332 356677777753 355666554
No 186
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=24.09 E-value=2.6e+02 Score=24.10 Aligned_cols=77 Identities=9% Similarity=-0.005 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHH------HHhCCeEeccCCCCCHHHHHHHhhhcCc---e
Q 019348 58 SQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV------IAIGAIASTANPVYTVSELSKQVKDSNP---K 128 (342)
Q Consensus 58 ~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~------~~~G~~~v~l~~~~~~~~l~~~l~~~~~---~ 128 (342)
.+++..+..+-..|++.|+ .++|+..|..+.+...+.- -..+...+-...+-.++.+.+++++.+. .
T Consensus 255 g~~ypgv~e~L~~Lk~~Gi----~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~KPKp~~l~~al~~Lgl~pee 330 (387)
T 3nvb_A 255 GKAFTEFQEWVKKLKNRGI----IIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFVANWENKADNIRTIQRTLNIGFDS 330 (387)
T ss_dssp HHHHHHHHHHHHHHHHTTC----EEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEEEESSCHHHHHHHHHHHHTCCGGG
T ss_pred cccCHHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHhhccccccCccCccEEEeCCCCcHHHHHHHHHHhCcCccc
Confidence 4677888888899998777 5999999888877777753 2345555545555556677888877664 4
Q ss_pred EEEEcccchh
Q 019348 129 LVITVPELWD 138 (342)
Q Consensus 129 ~vi~~~~~~~ 138 (342)
++++++...+
T Consensus 331 ~v~VGDs~~D 340 (387)
T 3nvb_A 331 MVFLDDNPFE 340 (387)
T ss_dssp EEEECSCHHH
T ss_pred EEEECCCHHH
Confidence 6777666544
No 187
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=23.91 E-value=1.7e+02 Score=26.28 Aligned_cols=77 Identities=18% Similarity=0.063 Sum_probs=47.7
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEe-cHHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWV-VPPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~-~P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ +. ....+.+++.+.+ ++++.. -+..-..|.+++
T Consensus 159 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p-- 236 (500)
T 1o04_A 159 VGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE-- 236 (500)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCT--
T ss_pred CCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCC--
Confidence 347777788876544433 4778999999999854 33 3456667777653 233333 223566677654
Q ss_pred CccCCCCceEEEeecc
Q 019348 304 RKFDISSLKLVGSGAA 319 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 237 ------~v~~I~FTGS 246 (500)
T 1o04_A 237 ------DVDKVAFTGS 246 (500)
T ss_dssp ------TCCEEEEESC
T ss_pred ------CcCEEEEECC
Confidence 4666776664
No 188
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=23.86 E-value=1.5e+02 Score=26.64 Aligned_cols=78 Identities=10% Similarity=0.020 Sum_probs=47.7
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCC---HHHHHHHHHhcc-----ceEEEe-cHHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFD---IEMALRAIEKYR-----VTVWWV-VPPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~---~~~~~~~i~~~~-----~t~~~~-~P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ +.. ...+.+++.+.+ ++++.. -+..-..|.+++
T Consensus 162 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp-- 239 (497)
T 3i44_A 162 IGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHP-- 239 (497)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCT--
T ss_pred ceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCC--
Confidence 346677777766654433 4678899999999854 333 456666666653 233333 224566777665
Q ss_pred CccCCCCceEEEeeccc
Q 019348 304 RKFDISSLKLVGSGAAP 320 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~ 320 (342)
.++.+.++|+.
T Consensus 240 ------~v~~I~FTGS~ 250 (497)
T 3i44_A 240 ------DLEMISFTGST 250 (497)
T ss_dssp ------TCCEEEEESCH
T ss_pred ------CcCEEEEeCcH
Confidence 36667666643
No 189
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=23.83 E-value=1.4e+02 Score=26.79 Aligned_cols=76 Identities=18% Similarity=0.127 Sum_probs=46.1
Q ss_pred eEEEEccchhHHHHHHH-HHHHHhhcCCeEEEc-cCCCH---HHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCCCC
Q 019348 236 HVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSM-GKFDI---EMALRAIEKYR-----VTVWWVV-PPIILALAKNSLVR 304 (342)
Q Consensus 236 d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~-~~~~~---~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~~~ 304 (342)
-++....|+.+...+.. -+..+|.+|.++++= +...| ..+.+++.+.+ ++++... +.+-+.|.+++
T Consensus 154 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p--- 230 (505)
T 3prl_A 154 GVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHP--- 230 (505)
T ss_dssp SEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCT---
T ss_pred cEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCC---
Confidence 46666667665544433 377899999999985 34443 45666666642 3344332 34567777665
Q ss_pred ccCCCCceEEEeecc
Q 019348 305 KFDISSLKLVGSGAA 319 (342)
Q Consensus 305 ~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 231 -----~vd~I~FTGS 240 (505)
T 3prl_A 231 -----GIDMITFTGG 240 (505)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CCCEEEEeCC
Confidence 3666766663
No 190
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=23.81 E-value=1.5e+02 Score=25.06 Aligned_cols=56 Identities=11% Similarity=0.036 Sum_probs=26.1
Q ss_pred CCCC-EEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKD-VVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~-~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++|| .|++..+..+.+...+..+...|+.++.++.. ...+++...++. +++++++.
T Consensus 106 ~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 166 (400)
T 3vax_A 106 RTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRP-DTLLVSLM 166 (400)
T ss_dssp HHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCT-TEEEEECC
T ss_pred cCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCC-CceEEEEE
Confidence 3566 66665444433333333333456555444332 244555555543 44555543
No 191
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=23.80 E-value=2.5e+02 Score=21.66 Aligned_cols=80 Identities=8% Similarity=0.004 Sum_probs=53.1
Q ss_pred cceeHHHHHHHHHHHHHHH-------HH--cCCCCCCEEEEECCCC--ChH--HHHHHHHHHhCCeEeccCCCCCHHHHH
Q 019348 53 ESLSFSQFKSIVIKVSHSF-------RH--LGITKKDVVLIFAPNS--IHF--PICFLGVIAIGAIASTANPVYTVSELS 119 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L-------~~--~g~~~g~~V~i~~~n~--~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~ 119 (342)
..++..|+...++.+-..+ .. ..-..+.+|.+.+..+ .+. .++-..+-..|.-++-+..+.+.+++.
T Consensus 57 g~i~v~q~~~aa~~~~~~l~~l~~~l~~~~~~~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv 136 (215)
T 3ezx_A 57 AEIFLPQIMMSGKAMSNAMEVLTPELEKNKKEGEEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVV 136 (215)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHTSSCCC---CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHH
Confidence 5777777776655554333 22 1123344666665433 333 344445567888999999999999999
Q ss_pred HHhhhcCceEEEE
Q 019348 120 KQVKDSNPKLVIT 132 (342)
Q Consensus 120 ~~l~~~~~~~vi~ 132 (342)
....+.+|++|..
T Consensus 137 ~~~~~~~~d~v~l 149 (215)
T 3ezx_A 137 EEAAKHKGEKVLL 149 (215)
T ss_dssp HHHHHTTTSCEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999999988
No 192
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=23.68 E-value=1.4e+02 Score=23.88 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 66 KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 66 ~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
.+...+.+.++.+++.|.++|..+.....+...+...|.
T Consensus 210 ~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~ 248 (271)
T 1e0c_A 210 DIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGY 248 (271)
T ss_dssp THHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCC
Confidence 344556677888999999999999888888888888886
No 193
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=23.65 E-value=3.3e+02 Score=22.99 Aligned_cols=55 Identities=5% Similarity=0.045 Sum_probs=34.4
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC-----CCCHHHHHHHhhhc---Cce-EEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKDS---NPK-LVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~---~~~-~vi~~ 133 (342)
+++||.|++..|....+ .-++...|+.++.++. ....+++...++.. +.+ +++++
T Consensus 122 ~~~gd~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 185 (413)
T 3t18_A 122 LDEGDPLICHDYYWAPY---RKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLIN 185 (413)
T ss_dssp CCSSCEEEEESSCCTHH---HHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCcccH---HHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 36789988876644433 3445667877666653 34567788877753 555 45544
No 194
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=23.54 E-value=1.6e+02 Score=26.64 Aligned_cols=88 Identities=17% Similarity=0.021 Sum_probs=51.2
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEe-cHHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWV-VPPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~-~P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ +. ....+.+++.+.+ ++++.. -+..-..|..++
T Consensus 162 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p-- 239 (528)
T 3u4j_A 162 VGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDP-- 239 (528)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCT--
T ss_pred ceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCC--
Confidence 346777778776655533 3678899999999854 33 3456666666653 233333 234667777665
Q ss_pred CccCCCCceEEEeecccCC-HHHHHHHH
Q 019348 304 RKFDISSLKLVGSGAAPLG-KELMEDCQ 330 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~l~-~~~~~~~~ 330 (342)
.++.+.++|+.-- ..+.+...
T Consensus 240 ------~vd~I~FTGS~~~G~~i~~~aa 261 (528)
T 3u4j_A 240 ------NVDMVAFTGSVRVGTKLGEIAA 261 (528)
T ss_dssp ------TCCEEEEESCHHHHHHHHHHHH
T ss_pred ------CcCEEEEeCCHHHHHHHHHHHH
Confidence 3566666664322 33444443
No 195
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=23.51 E-value=3e+02 Score=24.27 Aligned_cols=69 Identities=7% Similarity=0.004 Sum_probs=49.4
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCCChHHHHHHHHHH----hC--CeEeccCCCCC-H------HHHHHHhhhcCceEEE
Q 019348 66 KVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIA----IG--AIASTANPVYT-V------SELSKQVKDSNPKLVI 131 (342)
Q Consensus 66 ~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~----~G--~~~v~l~~~~~-~------~~l~~~l~~~~~~~vi 131 (342)
++.+.+.+.+ +.++++|+|.+.-+.+..+++..+.. .| ..++-++.... . +....+.+..+..+.+
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v 83 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCET 83 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEE
Confidence 4556676665 57889999999999999988877776 34 45666776665 2 2356677888888777
Q ss_pred Ecc
Q 019348 132 TVP 134 (342)
Q Consensus 132 ~~~ 134 (342)
.+-
T Consensus 84 ~~~ 86 (464)
T 3a2k_A 84 AQI 86 (464)
T ss_dssp EEC
T ss_pred EEe
Confidence 654
No 196
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=23.19 E-value=2.5e+02 Score=24.45 Aligned_cols=59 Identities=8% Similarity=0.104 Sum_probs=37.2
Q ss_pred CCCCCEEEEECCCCChHHHHHH---------HHHHhCCeEeccCCC---CCHHHHHHHhhh-cCceEEEEcc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFL---------GVIAIGAIASTANPV---YTVSELSKQVKD-SNPKLVITVP 134 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~l---------A~~~~G~~~v~l~~~---~~~~~l~~~l~~-~~~~~vi~~~ 134 (342)
+++||.|++...........++ .+...|+.+..++.. ...+++...++. -++++|+++.
T Consensus 113 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 5789988776513333333333 234578877777652 456778887775 5788888776
No 197
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=23.19 E-value=1.1e+02 Score=24.85 Aligned_cols=79 Identities=10% Similarity=0.056 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC--CCCHHH---HHHHhhhcCceE
Q 019348 57 FSQFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--VYTVSE---LSKQVKDSNPKL 129 (342)
Q Consensus 57 y~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~ 129 (342)
++.+.++...+-..+++. .+.++.+.++...+...++.-.+++-..|.. -+++ .-++.+ +...++..++++
T Consensus 138 ~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~ 215 (282)
T 3mfq_A 138 TEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQ--GVSTDSEVANSDMIETVNLIIDHNIKA 215 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSS--CSSSCSCCCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEeccc--ccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 344555555555555432 3444567777777777787777666655432 1222 224444 445567788999
Q ss_pred EEEcccch
Q 019348 130 VITVPELW 137 (342)
Q Consensus 130 vi~~~~~~ 137 (342)
||+++..-
T Consensus 216 if~e~~~~ 223 (282)
T 3mfq_A 216 IFTESTTN 223 (282)
T ss_dssp EECBTTSC
T ss_pred EEEeCCCC
Confidence 99886543
No 198
>1zd0_A Hypothetical protein PF0523; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: d.329.1.1
Probab=23.09 E-value=99 Score=22.59 Aligned_cols=58 Identities=9% Similarity=0.165 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCCCCC-EEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhc
Q 019348 65 IKVSHSFRHLGITKKD-VVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS 125 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~-~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 125 (342)
+++...|++.|++.|+ .++++..+..+-+--+ .-..|+..++++. ...+.+...++..
T Consensus 86 rQIs~Alk~~Gi~~g~n~ivv~i~~~e~~~~~l--~~~i~g~~v~l~~-~d~~~iKk~~e~~ 144 (150)
T 1zd0_A 86 RQIKEAIKKVGAKEGENYIVTFGENASALLQKI--LSTLEIKELELER-CDLEYAKKAFEDI 144 (150)
T ss_dssp SSHHHHHHHHBCCSEEEEEEEESTTHHHHHHHH--HHHTTCEEECCCC-CCHHHHHHHHHHH
T ss_pred chHHHHHHHhCCCCCCceEEEEEcCcHHHHHHH--HHHhCCeeccccc-CCHHHHHHHHHHH
Confidence 3456777778999884 5555554544332222 2455777888876 5667777776654
No 199
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=23.09 E-value=1.9e+02 Score=22.97 Aligned_cols=68 Identities=6% Similarity=-0.047 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhC----CeEeccCCCCC--HHHHHHHhhhcCceEEEEc
Q 019348 63 IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG----AIASTANPVYT--VSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 63 ~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G----~~~v~l~~~~~--~~~l~~~l~~~~~~~vi~~ 133 (342)
..+++..+|++. .+++|++.+.-+.+..++..-+...+ ...+.++...+ .+....+.+..++...+++
T Consensus 9 ~~~~l~~~i~~~---~~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 82 (257)
T 2e18_A 9 VIERILEFIREK---GNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVIN 82 (257)
T ss_dssp HHHHHHHHHHHH---CTTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHh---CCCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 344566666665 35578888888999887766666653 33455554433 2334556667777766654
No 200
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=23.05 E-value=2.9e+02 Score=23.20 Aligned_cols=76 Identities=12% Similarity=0.010 Sum_probs=45.7
Q ss_pred cceeHHHHHHHHHHH---HHHH-HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCce
Q 019348 53 ESLSFSQFKSIVIKV---SHSF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPK 128 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~l---a~~L-~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 128 (342)
..+++.+........ .+.| +..++++|++|+|.. .+.--..+...+...|+-++.+.. +++++ ..++..+++
T Consensus 160 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~--~~~~~-~~~~~lGa~ 235 (363)
T 3uog_A 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS--SREKL-DRAFALGAD 235 (363)
T ss_dssp TTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES--CHHHH-HHHHHHTCS
T ss_pred CCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec--CchhH-HHHHHcCCC
Confidence 467887765332222 2334 456899999999998 554444444444567887665543 33333 345667777
Q ss_pred EEEE
Q 019348 129 LVIT 132 (342)
Q Consensus 129 ~vi~ 132 (342)
.++.
T Consensus 236 ~vi~ 239 (363)
T 3uog_A 236 HGIN 239 (363)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7765
No 201
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=22.98 E-value=4.1e+02 Score=24.37 Aligned_cols=83 Identities=6% Similarity=-0.028 Sum_probs=52.7
Q ss_pred cceeHHHHHHHHHHHHHHH-------HHcCC--CCCCEEEEECCCC--ChHHHHHH--HHHHhCCeEeccCCCCCHHHHH
Q 019348 53 ESLSFSQFKSIVIKVSHSF-------RHLGI--TKKDVVLIFAPNS--IHFPICFL--GVIAIGAIASTANPVYTVSELS 119 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L-------~~~g~--~~g~~V~i~~~n~--~~~~~~~l--A~~~~G~~~v~l~~~~~~~~l~ 119 (342)
..++-.|++..+..+...+ .+.+- ..+.+|++.+..+ .+.-.-++ .+-..|.-++-+....+.+++.
T Consensus 63 G~i~vpqv~~sa~~mk~av~~L~p~l~~~~~~~~~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv 142 (579)
T 3bul_A 63 GKMFLPQVVKSARVMKQAVAYLEPFIEASKEQCKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKIL 142 (579)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 4566666655554433333 22221 2234565555332 34444443 4446788888999999999999
Q ss_pred HHhhhcCceEEEEccc
Q 019348 120 KQVKDSNPKLVITVPE 135 (342)
Q Consensus 120 ~~l~~~~~~~vi~~~~ 135 (342)
..++..+|++|..+.-
T Consensus 143 ~aa~~~~~diVgLS~l 158 (579)
T 3bul_A 143 RTAKEVNADLIGLSGL 158 (579)
T ss_dssp HHHHHHTCSEEEEECC
T ss_pred HHHHHcCCCEEEEEec
Confidence 9999999999988753
No 202
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=22.93 E-value=2.3e+02 Score=23.73 Aligned_cols=55 Identities=20% Similarity=0.191 Sum_probs=23.7
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccC--C--CCCHHHHHHHhhhcCceEEEE
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--P--VYTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~--~~~~~~l~~~l~~~~~~~vi~ 132 (342)
++||.|++..+....+ ...-++...|+.++.++ + ....+++...++..++++|+.
T Consensus 91 ~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~ 149 (396)
T 2ch1_A 91 EEGDRVLIAVNGIWAE-RAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFL 149 (396)
T ss_dssp CTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 3556655544332221 11113444555443332 2 134455655555434455544
No 203
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=22.91 E-value=1.9e+02 Score=25.72 Aligned_cols=86 Identities=13% Similarity=0.037 Sum_probs=51.8
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCC---HHHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFD---IEMALRAIEKYR-----VTVWWVV-PPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~---~~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. .+..+|.+|.++++=+ +.. ...+.+++.+.+ ++++... +..-..|.+++
T Consensus 144 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~-- 221 (475)
T 1euh_A 144 VGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ-- 221 (475)
T ss_dssp CSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT--
T ss_pred cceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCC--
Confidence 346777777766544433 4778999999999854 333 356666666652 3334332 33556777665
Q ss_pred CccCCCCceEEEeecccCCHHHHHHHHH
Q 019348 304 RKFDISSLKLVGSGAAPLGKELMEDCQK 331 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~l~~~~~~~~~~ 331 (342)
.++.+.+.|+ ..+.+.+.+
T Consensus 222 ------~v~~V~fTGS---~~~g~~i~~ 240 (475)
T 1euh_A 222 ------AVNFINFTGS---TGIGERIGK 240 (475)
T ss_dssp ------TCCEEEEESC---HHHHHHHHH
T ss_pred ------CcCEEEEECc---hHHHHHHHH
Confidence 4667777774 344444444
No 204
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=22.89 E-value=2.6e+02 Score=23.56 Aligned_cols=62 Identities=10% Similarity=0.147 Sum_probs=37.5
Q ss_pred HHHHHcCCC-CCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 69 HSFRHLGIT-KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 69 ~~L~~~g~~-~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+.|.+.++. +|++|+|...-+.-..++.+| ...|+.++.+.. +++.+....+..+++.++..
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~~ 239 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVIST--SPSKKEEALKNFGADSFLVS 239 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEES--CGGGHHHHHHTSCCSEEEET
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeC--CHHHHHHHHHhcCCceEEec
Confidence 345566888 999999998633444444444 457876555543 33444444446777766543
No 205
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=22.82 E-value=2.9e+02 Score=22.64 Aligned_cols=84 Identities=15% Similarity=0.178 Sum_probs=44.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCh-HHHHH-----HHHHHhCCeEeccCCCCCHHH---HHHHhhhcCceEEEEccc
Q 019348 65 IKVSHSFRHLGITKKDVVLIFAPNSIH-FPICF-----LGVIAIGAIASTANPVYTVSE---LSKQVKDSNPKLVITVPE 135 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~-----lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~ 135 (342)
+..|+.|+. ++...|+++.++... |+..+ -++...|...+..+... .+. +.+.+...+++.+|....
T Consensus 53 n~~a~~l~~---~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~ 128 (333)
T 3jvd_A 53 NQLAKALRE---HRSALVGVIVPDLSNEYYSESLQTIQQDLKAAGYQMLVAEANS-VQAQDVVMESLISIQAAGIIHVPV 128 (333)
T ss_dssp --------------CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECCS-HHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHhhc---CCCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcch
Confidence 334445543 344579999887543 33222 24667788877776665 443 333444568888888766
Q ss_pred chhhhhccCCCeEEecCC
Q 019348 136 LWDKVKDLNLPAVLLGSK 153 (342)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~ 153 (342)
...+...+.+.+.++..
T Consensus 129 -~~~~~~~~iPvV~~~~~ 145 (333)
T 3jvd_A 129 -VGSIAPEGIPMVQLTRG 145 (333)
T ss_dssp -TTCCC-CCSCEEEECC-
T ss_pred -HHHHhhCCCCEEEECcc
Confidence 33444445677777644
No 206
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=22.67 E-value=3.1e+02 Score=22.33 Aligned_cols=88 Identities=14% Similarity=0.007 Sum_probs=49.8
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHH
Q 019348 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (342)
Q Consensus 43 ~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (342)
++.+-..+.+-+-||++--.. .+...+.+.|. +++ | +....+-.-..+.+++.+.|.-++.+-|...+......
T Consensus 32 ~v~~K~E~~~ptGSfK~R~a~--~~l~~a~~~g~~~~~--v-v~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~ 106 (303)
T 1o58_A 32 RIFLKLEKNNPGGSVKDRPAL--FMILDAEKRGLLKNG--I-VEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKV 106 (303)
T ss_dssp TEEEEEGGGSTTSBTTHHHHH--HHHHHHHHTTCCTTC--E-EEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHH
T ss_pred eEEEEecCCCCCCChHHHHHH--HHHHHHHHcCCCCCC--E-EEECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 455544433334455443221 22233334453 344 2 34455555566667788999866555444444556677
Q ss_pred hhhcCceEEEEccc
Q 019348 122 VKDSNPKLVITVPE 135 (342)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (342)
++..+.++++++..
T Consensus 107 ~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 107 LKMLGAELVLTPGE 120 (303)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHcCCEEEEECCC
Confidence 88899999998764
No 207
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=22.61 E-value=1.5e+02 Score=22.24 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=19.7
Q ss_pred cceeHHHHHHHHHHHHHHHHHc
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHL 74 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~ 74 (342)
.-+||.++.+.+.++|..+.+.
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~ 33 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARD 33 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999764
No 208
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=22.48 E-value=1.9e+02 Score=22.97 Aligned_cols=55 Identities=15% Similarity=0.193 Sum_probs=37.6
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP 87 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~ 87 (342)
.|+.+.+. +..|+...+...|+. ..-++.++.+++.+.+..|.+.|. |.|++.|.
T Consensus 13 ltv~~~l~---~~lP~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~---d~iviaCN 71 (255)
T 2jfz_A 13 FSVLKSLL---KARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEI---ELLIVACN 71 (255)
T ss_dssp HHHHHHHH---HTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHGGGCC---SCEEECCH
T ss_pred HHHHHHHH---HHCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CEEEEeCc
Confidence 34444444 446777777766533 456899999999999999988775 34555543
No 209
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=22.47 E-value=1.3e+02 Score=25.05 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=30.9
Q ss_pred HHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEE
Q 019348 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVI 131 (342)
Q Consensus 71 L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi 131 (342)
++..++++||.|++..+... ....++...|+.++.++.. ...+++...++. ++++|+
T Consensus 70 ~~~~~~~~gd~v~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 130 (374)
T 3uwc_A 70 FKMLNIGAGDEVITCANTFI---ASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITD-KTKAIM 130 (374)
T ss_dssp HHHTTCCTTCEEEEESSSCH---HHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT-TEEEEC
T ss_pred HHHcCCCCCCEEEECCCccH---HHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC-CceEEE
Confidence 34445677888777655333 3334556777766655543 134445554443 455555
No 210
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=22.47 E-value=2e+02 Score=24.08 Aligned_cols=79 Identities=11% Similarity=0.106 Sum_probs=44.6
Q ss_pred cceeHHHHHHHHHH---HHHHHHHcCCC-CCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCce
Q 019348 53 ESLSFSQFKSIVIK---VSHSFRHLGIT-KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPK 128 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~---la~~L~~~g~~-~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 128 (342)
..+++.+....... .-+.|.+.+++ +|++|+|...-..-..++.+|- ..|+.++.+... ++++....+..+++
T Consensus 151 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~~~--~~~~~~~~~~lGa~ 227 (357)
T 2cf5_A 151 EGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAK-AMGHHVTVISSS--NKKREEALQDLGAD 227 (357)
T ss_dssp SSCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESS--TTHHHHHHTTSCCS
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeCC--hHHHHHHHHHcCCc
Confidence 35777764322111 12345566888 9999999986334444555444 568765555443 33444444467777
Q ss_pred EEEEcc
Q 019348 129 LVITVP 134 (342)
Q Consensus 129 ~vi~~~ 134 (342)
.++...
T Consensus 228 ~vi~~~ 233 (357)
T 2cf5_A 228 DYVIGS 233 (357)
T ss_dssp CEEETT
T ss_pred eeeccc
Confidence 666543
No 211
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=22.41 E-value=3.2e+02 Score=22.30 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=53.7
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (342)
.++.+...+.+-+-|+++--. ..+...+.+.| +++|+.|.... .+-.-..+.+++...|.-++.+-|...+.....
T Consensus 25 ~~v~~K~E~~~ptGSfK~R~a--~~~i~~a~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 101 (303)
T 2v03_A 25 SEVWLKLEGNNPAGSVKDRAA--LSMIVEAEKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRA 101 (303)
T ss_dssp CEEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred CEEEEEeccCCCCCCcHHHHH--HHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 345555443334445554322 22222333444 35666665554 455566667777899987666555555555677
Q ss_pred HhhhcCceEEEEcc
Q 019348 121 QVKDSNPKLVITVP 134 (342)
Q Consensus 121 ~l~~~~~~~vi~~~ 134 (342)
.++..+.++++++.
T Consensus 102 ~~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 102 AMRAYGAELILVTK 115 (303)
T ss_dssp HHHHTTCEEEEECT
T ss_pred HHHHcCCEEEEECC
Confidence 88899999999985
No 212
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=22.26 E-value=1.3e+02 Score=24.72 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCe
Q 019348 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (342)
..+...+.+.++.+++.|.++|..+.....+.+++..+|..
T Consensus 240 ~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~ 280 (302)
T 3olh_A 240 EEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKP 280 (302)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCC
T ss_pred HHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCC
Confidence 45566677778888899999999998888888888888863
No 213
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=22.24 E-value=2.5e+02 Score=23.70 Aligned_cols=57 Identities=23% Similarity=0.167 Sum_probs=26.7
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC--C--CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V--YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~--~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+... .....-++...|..++.++. . ...+++...++..++++|+..
T Consensus 85 ~~~gd~Vl~~~~~~~-~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 145 (411)
T 3nnk_A 85 IRPGDKVLVPVFGRF-GHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTV 145 (411)
T ss_dssp CCTTCEEEEEECSHH-HHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEecCCch-HHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEe
Confidence 346666655543211 11123334455654443332 2 145666666655456666554
No 214
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=22.08 E-value=2.3e+02 Score=21.39 Aligned_cols=22 Identities=14% Similarity=0.079 Sum_probs=19.1
Q ss_pred cceeHHHHHHHHHHHHHHHHHc
Q 019348 53 ESLSFSQFKSIVIKVSHSFRHL 74 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~~L~~~ 74 (342)
.-+|+.++.+.+.++|..+.+.
T Consensus 11 ~l~~~~~i~~~i~~La~~I~~~ 32 (186)
T 3o7m_A 11 TLISEEQLQEKVKELALQIERD 32 (186)
T ss_dssp EEECHHHHHHHHHHHHHHHHHH
T ss_pred EecCHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999764
No 215
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=22.03 E-value=1.8e+02 Score=26.03 Aligned_cols=78 Identities=15% Similarity=-0.021 Sum_probs=48.5
Q ss_pred CCeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCC
Q 019348 234 LDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVVPPIILALAKNSLV 303 (342)
Q Consensus 234 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~ 303 (342)
+--++....|+.+...+.. -+..+|.+|.++++=+ +. ....+.+++.+.+ ++++......-..|.+++
T Consensus 155 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p-- 232 (503)
T 1a4s_A 155 PLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHP-- 232 (503)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCT--
T ss_pred cCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCC--
Confidence 3357777788776655533 4788999999999854 33 3456777777653 233333224556677665
Q ss_pred CccCCCCceEEEeecc
Q 019348 304 RKFDISSLKLVGSGAA 319 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~ 319 (342)
.++.+.++|+
T Consensus 233 ------~v~~V~FTGS 242 (503)
T 1a4s_A 233 ------NVAKVSFTGS 242 (503)
T ss_dssp ------TCCEEEEESC
T ss_pred ------CcCEEEEeCC
Confidence 3666766664
No 216
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.97 E-value=1.4e+02 Score=25.10 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=43.9
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCC---------------------
Q 019348 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT--------------------- 114 (342)
Q Consensus 56 Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~--------------------- 114 (342)
++..+ .....+++.|++.| ..|.++++.. +.- .+-..|..+++++...+
T Consensus 14 ~~Ghv-~~~~~La~~L~~~G----heV~v~~~~~--~~~---~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (402)
T 3ia7_A 14 GHGHV-YPSLGLVSELARRG----HRITYVTTPL--FAD---EVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVY 83 (402)
T ss_dssp SHHHH-HHHHHHHHHHHHTT----CEEEEEECHH--HHH---HHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHH
T ss_pred CCccc-ccHHHHHHHHHhCC----CEEEEEcCHH--HHH---HHHHcCCEEEecccccccccccccccccchHHHHHHHH
Confidence 34444 55678999998864 4577776522 211 12467888887764211
Q ss_pred -------HHHHHHHhhhcCceEEEEc
Q 019348 115 -------VSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 115 -------~~~l~~~l~~~~~~~vi~~ 133 (342)
..++...++..+|++|+++
T Consensus 84 ~~~~~~~~~~l~~~l~~~~pD~Vi~d 109 (402)
T 3ia7_A 84 VRENVAILRAAEEALGDNPPDLVVYD 109 (402)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEC
Confidence 2456677888899999998
No 217
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=21.93 E-value=2.6e+02 Score=23.37 Aligned_cols=75 Identities=20% Similarity=0.305 Sum_probs=43.4
Q ss_pred cceeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC-eEeccCCCCCHHHHHHHhhhcCce
Q 019348 53 ESLSFSQFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQVKDSNPK 128 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la---~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 128 (342)
..+++.+..- ...++ +.|...++++|++|+|...-+.-..++.+| ...|+ .++.++. +++ -..+++..+++
T Consensus 144 ~~l~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~--~~~-~~~~a~~lGa~ 218 (356)
T 1pl8_A 144 DNVTFEEGAL-IEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVA-KAMGAAQVVVTDL--SAT-RLSKAKEIGAD 218 (356)
T ss_dssp TTSCHHHHHH-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEES--CHH-HHHHHHHTTCS
T ss_pred CCCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECC--CHH-HHHHHHHhCCC
Confidence 3567776432 22222 234556899999999998633444454444 45687 5555543 233 33455677777
Q ss_pred EEEE
Q 019348 129 LVIT 132 (342)
Q Consensus 129 ~vi~ 132 (342)
.++.
T Consensus 219 ~vi~ 222 (356)
T 1pl8_A 219 LVLQ 222 (356)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6664
No 218
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=21.90 E-value=1.8e+02 Score=24.20 Aligned_cols=52 Identities=10% Similarity=0.073 Sum_probs=27.2
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEE
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVI 131 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi 131 (342)
+++||.|++..+..... ..++...|+.++.++.. ...+++...++. ++++|+
T Consensus 71 ~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~ 126 (375)
T 2fnu_A 71 SADRNEIITTPISFVAT---ANMLLESGYTPVFAGIKNDGNIDELALEKLINE-RTKAIV 126 (375)
T ss_dssp CTTSCEEEECSSSCTHH---HHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCT-TEEEEE
T ss_pred CCCCCEEEECCCccHhH---HHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCc-CceEEE
Confidence 67788776654433332 33455677766555442 234445444432 445543
No 219
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=21.82 E-value=1.5e+02 Score=26.69 Aligned_cols=78 Identities=12% Similarity=0.032 Sum_probs=47.7
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCC---HHHHHHHHHhcc-----ceEEEe-cHHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFD---IEMALRAIEKYR-----VTVWWV-VPPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~---~~~~~~~i~~~~-----~t~~~~-~P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ +.. ...+.+++.+.+ ++++.. .+.+-..|..++
T Consensus 171 ~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p-- 248 (520)
T 3ed6_A 171 VGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHK-- 248 (520)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCT--
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCC--
Confidence 347777788877665533 3678899999999854 333 355666666653 233333 234566777665
Q ss_pred CccCCCCceEEEeeccc
Q 019348 304 RKFDISSLKLVGSGAAP 320 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~ 320 (342)
.++.+.+.|+.
T Consensus 249 ------~vd~V~FTGS~ 259 (520)
T 3ed6_A 249 ------EVDLVSFTGGI 259 (520)
T ss_dssp ------TCSEEEEESCH
T ss_pred ------CcCEEEEECCH
Confidence 35566666643
No 220
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=21.74 E-value=1.5e+02 Score=26.60 Aligned_cols=79 Identities=16% Similarity=0.109 Sum_probs=46.7
Q ss_pred CCeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCC---HHHHHHHHHhc-cceEEEecH----HHHHHHHcCCCC
Q 019348 234 LDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFD---IEMALRAIEKY-RVTVWWVVP----PIILALAKNSLV 303 (342)
Q Consensus 234 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~---~~~~~~~i~~~-~~t~~~~~P----~~l~~l~~~~~~ 303 (342)
+-.++....|+.+...+.. .+..+|.+|.++++=+ +.. ...+.+++.+. ...++.+++ ..-..|++++
T Consensus 159 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p-- 236 (495)
T 1wnd_A 159 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHP-- 236 (495)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCT--
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCC--
Confidence 3357777788776644433 4788999999999854 333 35566666653 222233222 2445565543
Q ss_pred CccCCCCceEEEeeccc
Q 019348 304 RKFDISSLKLVGSGAAP 320 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~ 320 (342)
.++.+.++|+.
T Consensus 237 ------~vd~I~FTGS~ 247 (495)
T 1wnd_A 237 ------KVRMVSLTGSI 247 (495)
T ss_dssp ------TEEEEEEESCH
T ss_pred ------CcCEEEEECcH
Confidence 47777777743
No 221
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=21.71 E-value=1.5e+02 Score=25.14 Aligned_cols=88 Identities=11% Similarity=0.025 Sum_probs=53.1
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHh
Q 019348 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (342)
Q Consensus 43 ~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 122 (342)
++.+...+.+.+-++++-- +..+...+.+. |....+....+-.-..+.++|.+.|.-++.+-|...+......+
T Consensus 62 ~v~~K~E~~~ptGSfK~Rg--a~~~i~~a~~~----g~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~ 135 (364)
T 4h27_A 62 SVYLKMDSAQPSGSFKIRG--IGHFCKRWAKQ----GCAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERL 135 (364)
T ss_dssp EEEEEEGGGSTTSBTHHHH--HHHHHHHHHHT----TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHH
T ss_pred EEEEEeCCCCCCCCHHHHH--HHHHHHHHHhc----CCCEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence 4555555434455555432 22222223333 32334445556666777778889998666555555566677888
Q ss_pred hhcCceEEEEcccc
Q 019348 123 KDSNPKLVITVPEL 136 (342)
Q Consensus 123 ~~~~~~~vi~~~~~ 136 (342)
+..++++++++...
T Consensus 136 ~~~GA~Vv~v~~~~ 149 (364)
T 4h27_A 136 KNEGATVKVVGELL 149 (364)
T ss_dssp HTTTCEEEEECSST
T ss_pred HHcCCEEEEECCCH
Confidence 99999999998644
No 222
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=21.69 E-value=2.6e+02 Score=23.68 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=28.3
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCC--eE--eccCC---CCCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGA--IA--STANP---VYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~--~~--v~l~~---~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+.....+.........|. .. +++++ ....+++...++..++++|++.
T Consensus 115 ~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 179 (425)
T 3ecd_A 115 AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAG 179 (425)
T ss_dssp CCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEc
Confidence 56889888876544331111111112332 43 34442 3467888888876678888876
No 223
>1zjc_A Aminopeptidase AMPS; metallopeptidase, hydrolase; 1.80A {Staphylococcus aureus subsp} SCOP: e.60.1.1
Probab=21.68 E-value=1.4e+02 Score=26.07 Aligned_cols=50 Identities=12% Similarity=0.154 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEECCCCC-hHH-HHHHHHHHhCCeEecc
Q 019348 60 FKSIVIKVSHSFRHL--GITKKDVVLIFAPNSI-HFP-ICFLGVIAIGAIASTA 109 (342)
Q Consensus 60 l~~~~~~la~~L~~~--g~~~g~~V~i~~~n~~-~~~-~~~lA~~~~G~~~v~l 109 (342)
+..+..++|..+.+. ++++|+.|.|..+-.. +++ .+.-++..+|+-++.+
T Consensus 7 ~~~~l~k~A~~lV~~~~~lq~Ge~VlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v 60 (418)
T 1zjc_A 7 YKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV 60 (418)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEE
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEE
Confidence 456778888888665 7799999999987553 333 4556788889877654
No 224
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=21.58 E-value=1.4e+02 Score=23.57 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=31.9
Q ss_pred CcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCChHHHHHHH
Q 019348 52 DESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLG 98 (342)
Q Consensus 52 ~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA 98 (342)
..-+|+.|+.+++.++|..+.+. +-...+.+.+...++-..++..++
T Consensus 33 ~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La 80 (230)
T 1dqn_A 33 HLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLT 80 (230)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHH
T ss_pred cEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHH
Confidence 36799999999999999999753 210034566666777555554444
No 225
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=21.57 E-value=1.8e+02 Score=25.95 Aligned_cols=79 Identities=9% Similarity=-0.064 Sum_probs=49.8
Q ss_pred CeEEEEccchhHHHHHHHH-HHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSVI-LYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVV-PPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~~-~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+... +..+|.+|.++++=+ .. ....+.+++.+.+ ++++... +.+-+.|.+++
T Consensus 143 ~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p-- 220 (490)
T 2wme_A 143 LGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP-- 220 (490)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCT--
T ss_pred eeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCC--
Confidence 3567777888776665443 678899999999854 33 3356666676653 2344433 34556777665
Q ss_pred CccCCCCceEEEeecccC
Q 019348 304 RKFDISSLKLVGSGAAPL 321 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~l 321 (342)
.++.+.++|+.-
T Consensus 221 ------~v~~I~FTGS~~ 232 (490)
T 2wme_A 221 ------LIEKISFTGGTS 232 (490)
T ss_dssp ------TCCEEEEESCHH
T ss_pred ------CCCEEEEECChH
Confidence 466777777543
No 226
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=21.52 E-value=3.3e+02 Score=22.16 Aligned_cols=91 Identities=13% Similarity=0.026 Sum_probs=52.4
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCC--EEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHH
Q 019348 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKD--VVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSEL 118 (342)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~g~--~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 118 (342)
.++.+-..+.+-+-|+++-- +..+...+.+.| +++|+ .|.. ...+-.-..+.+++.+.|.-++.+-|...+..-
T Consensus 24 ~~v~~K~E~~~ptGSfK~R~--a~~~l~~a~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k 100 (304)
T 1ve1_A 24 AEVWVKLEGLNPGGSIKDRP--AWYMIKDAEERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEER 100 (304)
T ss_dssp CEEEEEEGGGSTTSBTTHHH--HHHHHHHHHHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHH
T ss_pred CEEEEEecccCCCCcHHHHH--HHHHHHHHHHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHH
Confidence 34555444333344454422 112222333444 45566 4433 455556666677788999866555454444566
Q ss_pred HHHhhhcCceEEEEccc
Q 019348 119 SKQVKDSNPKLVITVPE 135 (342)
Q Consensus 119 ~~~l~~~~~~~vi~~~~ 135 (342)
...++..+.++++++.+
T Consensus 101 ~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 101 KRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHHHHHTTCEEEEECTT
T ss_pred HHHHHHcCCEEEEECCC
Confidence 67888899999998865
No 227
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=21.48 E-value=3.1e+02 Score=22.84 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=46.7
Q ss_pred cceeHHHHHHHHHHHHH---HH-HHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCce
Q 019348 53 ESLSFSQFKSIVIKVSH---SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPK 128 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la~---~L-~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 128 (342)
..+++.+.......++. .| +..++++|++|+|....+.--..+...+...|+.++.+.. +++++ ..++..+++
T Consensus 138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~-~~~~~lGa~ 214 (353)
T 4dup_A 138 KGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG--STGKC-EACERLGAK 214 (353)
T ss_dssp TTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHH-HHHHHHTCS
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHH-HHHHhcCCC
Confidence 45778776544333332 33 3458999999999966665555555555677887665543 33333 344556777
Q ss_pred EEEE
Q 019348 129 LVIT 132 (342)
Q Consensus 129 ~vi~ 132 (342)
.++.
T Consensus 215 ~~~~ 218 (353)
T 4dup_A 215 RGIN 218 (353)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 228
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=21.46 E-value=2e+02 Score=23.91 Aligned_cols=54 Identities=15% Similarity=0.113 Sum_probs=33.7
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC------CCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV------YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+....+. -++...|+.++.++.. ...+++...++. ++++|++.
T Consensus 102 ~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 161 (375)
T 3op7_A 102 IEPGDHVISLYPTYQQLY---DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-TTKMICIN 161 (375)
T ss_dssp CCTTCEEEEEESSCTHHH---HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-TCCEEEEE
T ss_pred cCCCCEEEEeCCCchhHH---HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-CCeEEEEc
Confidence 468898888766554433 3456678766555432 356777777753 56677664
No 229
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=21.36 E-value=3.5e+02 Score=22.38 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=29.7
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC-C----CCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-V----YTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-~----~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++..+...... ..-++...|+.++.++. . ...+++...++..++++|+..
T Consensus 84 ~~gd~vlv~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 144 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDR-FADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVT 144 (385)
T ss_dssp CSCCEEEEECSSHHHHH-HHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEE
T ss_pred CCCCeEEEEcCCcchHH-HHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEE
Confidence 56787766533222111 12344556766555543 2 356677777765456666654
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=21.32 E-value=2.3e+02 Score=26.82 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=36.7
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCC--------------CHHHHHHHhhhc-Cce----EEEEcc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY--------------TVSELSKQVKDS-NPK----LVITVP 134 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~--------------~~~~l~~~l~~~-~~~----~vi~~~ 134 (342)
+++||.|++.-+ +...+ .-|+..+|+.++.+++.. ..+.+++.++.. +.+ ++++++
T Consensus 232 ~~pGD~VLv~r~-~H~S~--~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p 306 (715)
T 3n75_A 232 APAGSTILIDRN-CHKSL--THLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS 306 (715)
T ss_dssp CCTTCEEEEESS-CCHHH--HHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS
T ss_pred CCCCCEEEECCC-ccHHH--HHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC
Confidence 578998887644 33333 347889999988887631 477888888753 223 555554
No 231
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=21.32 E-value=2e+02 Score=25.73 Aligned_cols=77 Identities=16% Similarity=0.011 Sum_probs=47.3
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCC---HHHHHHHHHhcc-----ceEEEe-cHHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFD---IEMALRAIEKYR-----VTVWWV-VPPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~---~~~~~~~i~~~~-----~t~~~~-~P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ ... ...+.+++.+.+ ++++.. -+..-..|.+++
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~-- 237 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHM-- 237 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCT--
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCC--
Confidence 347777788876544433 4788999999999853 333 456667776653 233333 223566676654
Q ss_pred CccCCCCceEEEeecc
Q 019348 304 RKFDISSLKLVGSGAA 319 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 238 ------~v~~I~FTGS 247 (501)
T 1bxs_A 238 ------DVDKVAFTGS 247 (501)
T ss_dssp ------TCSEEEEESC
T ss_pred ------CcCEEEEECC
Confidence 3666776664
No 232
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=21.25 E-value=2.3e+02 Score=24.51 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=33.5
Q ss_pred CCCCCEEEEECCCCChHHHHHH--------HHHHhCCeEeccCCC----CCHHHHHHHhhhcCceEEEEcc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFL--------GVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~l--------A~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
+++||.|++...........++ .+...|+.+..++.. ...+++...++. ++++|+++.
T Consensus 98 l~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~-~tklV~i~~ 167 (409)
T 3jzl_A 98 LRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTP-KTKMIGIQR 167 (409)
T ss_dssp CCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCT-TEEEEEEEC
T ss_pred cCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccC-CCeEEEEEC
Confidence 4678887766523333333332 234567777666552 456677776653 567777664
No 233
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=21.21 E-value=1.6e+02 Score=23.68 Aligned_cols=51 Identities=6% Similarity=0.240 Sum_probs=38.2
Q ss_pred ceeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC
Q 019348 54 SLSFSQFKS-----IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (342)
Q Consensus 54 ~~Ty~~l~~-----~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (342)
.+.+.++.+ ....+...+.+.++.++..|.++|..+.....+..++..+|.
T Consensus 200 nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~ 255 (280)
T 1urh_A 200 NVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDV 255 (280)
T ss_dssp ECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTC
T ss_pred EeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCC
Confidence 455666654 123555666667888889999999999998888888888886
No 234
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=21.10 E-value=2e+02 Score=23.04 Aligned_cols=58 Identities=12% Similarity=0.205 Sum_probs=37.1
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCh
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH 91 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~ 91 (342)
.++.+.+. +..|+...+...|+. ...++.++.+++.+.+..|.+.|. |.|++.| |+..
T Consensus 16 ltv~~~i~---~~lP~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~---d~iviaC-NTas 77 (267)
T 2gzm_A 16 LTVAKELI---RQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHLLDLNI---KMLVIAC-NTAT 77 (267)
T ss_dssp HHHHHHHH---HHCTTSCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC---SEEEECC-HHHH
T ss_pred HHHHHHHH---HHCCCCCEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CEEEEeC-chhh
Confidence 44444444 446666666555432 467899999999999999988665 3444444 4433
No 235
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=20.99 E-value=3.3e+02 Score=23.35 Aligned_cols=56 Identities=7% Similarity=-0.101 Sum_probs=31.4
Q ss_pred CCCCCEEEEECCCCChHHHHHH-HHHHhCCeEecc-CCCCCHHHHHHHhhhcCceEEEEc
Q 019348 76 ITKKDVVLIFAPNSIHFPICFL-GVIAIGAIASTA-NPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
+++||.|++..+........+. .+...|+.++.+ +.. ..+++...++. ++++|+++
T Consensus 94 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-d~~~l~~~i~~-~~~~v~~~ 151 (421)
T 2ctz_A 94 AQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-RPEEFLALTDE-KTRAWWVE 151 (421)
T ss_dssp CCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-CHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-CHHHHHHhhcc-CCeEEEEE
Confidence 4678877665443332222221 135678777776 543 56677776654 56677664
No 236
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=20.84 E-value=2.4e+02 Score=22.69 Aligned_cols=8 Identities=25% Similarity=0.385 Sum_probs=3.6
Q ss_pred CceEEEeC
Q 019348 42 SKLALIDA 49 (342)
Q Consensus 42 ~~~a~~~~ 49 (342)
..++++..
T Consensus 16 ~~Igvi~~ 23 (303)
T 3kke_A 16 GTIGLIVP 23 (303)
T ss_dssp -CEEEEES
T ss_pred CEEEEEeC
Confidence 44555554
No 237
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.84 E-value=2.5e+02 Score=21.85 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=36.2
Q ss_pred CCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC-CCHHHHHHHhhhcCceEEEEcc
Q 019348 79 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-YTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 79 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
.+.++|++. .++... .--+...|..+..+++. ...+++.+.++..+|+++++..
T Consensus 36 ~~I~~Vis~-~~~a~~-l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivlag 90 (215)
T 3kcq_A 36 VVISCVISN-NAEARG-LLIAQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVCLAG 90 (215)
T ss_dssp EEEEEEEES-CTTCTH-HHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEEESS
T ss_pred cEEEEEEeC-CcchHH-HHHHHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEEEeC
Confidence 455666653 333322 23456778877766653 4568899999999999999863
No 238
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=20.82 E-value=2.1e+02 Score=25.51 Aligned_cols=90 Identities=10% Similarity=0.097 Sum_probs=51.5
Q ss_pred CCeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CCCH---HHHHHHHHhcc-----ceEEEecHHHHHHHHcCCCC
Q 019348 234 LDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KFDI---EMALRAIEKYR-----VTVWWVVPPIILALAKNSLV 303 (342)
Q Consensus 234 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~-----~t~~~~~P~~l~~l~~~~~~ 303 (342)
+--++....|+.+...+.. -+..+|.+|.++++=+ +..| ..+.+++.+.+ ++++.........|+.++
T Consensus 123 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~p-- 200 (484)
T 3ros_A 123 STGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADP-- 200 (484)
T ss_dssp CCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHHHHTST--
T ss_pred CCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHHHHhCC--
Confidence 3356777777765544433 4778999999999854 3433 55556666552 344554444444476654
Q ss_pred CccCCCCceEEEeecccC-CHHHHHHHHH
Q 019348 304 RKFDISSLKLVGSGAAPL-GKELMEDCQK 331 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~~l-~~~~~~~~~~ 331 (342)
.++.+.++|+.- -..+.+...+
T Consensus 201 ------~vd~I~fTGS~~~G~~i~~~aa~ 223 (484)
T 3ros_A 201 ------RIQGVALTGSERGGSAVAEAAGK 223 (484)
T ss_dssp ------TEEEEEEESCHHHHHHHHHHHHH
T ss_pred ------CcCEEEEECCHHHHHHHHHHHhc
Confidence 366677666433 2334444443
No 239
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=20.81 E-value=2.1e+02 Score=24.24 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=43.6
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCC---------------------
Q 019348 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT--------------------- 114 (342)
Q Consensus 56 Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~--------------------- 114 (342)
+++.+ .....+|+.|++.| ..|.++++.. +.-. +-..|..+++++...+
T Consensus 30 ~~GHv-~p~l~La~~L~~~G----h~V~v~~~~~--~~~~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (415)
T 3rsc_A 30 SHGLI-LPTLTVVTELVRRG----HRVSYVTAGG--FAEP---VRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLMY 99 (415)
T ss_dssp CHHHH-GGGHHHHHHHHHTT----CEEEEEECGG--GHHH---HHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHHH
T ss_pred Ccccc-ccHHHHHHHHHHCC----CEEEEEeCHH--HHHH---HHhcCCEEEeccccccccccchhhccccHHHHHHHHH
Confidence 45554 35568999998854 4577776433 2211 2356888888764322
Q ss_pred -------HHHHHHHhhhcCceEEEEc
Q 019348 115 -------VSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 115 -------~~~l~~~l~~~~~~~vi~~ 133 (342)
..++...++..+|++|++|
T Consensus 100 ~~~~~~~~~~l~~~l~~~~PDlVi~d 125 (415)
T 3rsc_A 100 LRENVSVLRATAEALDGDVPDLVLYD 125 (415)
T ss_dssp HHHHHHHHHHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEC
Confidence 1345667788899999987
No 240
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=20.77 E-value=2.4e+02 Score=23.04 Aligned_cols=74 Identities=14% Similarity=0.149 Sum_probs=46.5
Q ss_pred cceeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHhhhcCceE
Q 019348 53 ESLSFSQFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (342)
Q Consensus 53 ~~~Ty~~l~~~~~~la---~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (342)
..+++.+.......++ +.|...++++|++|+|... +.--..+...+...|+-++.+. . +++ .+.+++.+++.
T Consensus 114 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~--~~~-~~~~~~lGa~~ 188 (315)
T 3goh_A 114 DNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-A--SLS-QALAAKRGVRH 188 (315)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-S--SCC-HHHHHHHTEEE
T ss_pred CCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-C--hhh-HHHHHHcCCCE
Confidence 4678887653333322 3335568899999999999 6544444444556788766665 2 222 23456678888
Q ss_pred EE
Q 019348 130 VI 131 (342)
Q Consensus 130 vi 131 (342)
++
T Consensus 189 v~ 190 (315)
T 3goh_A 189 LY 190 (315)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 241
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=20.71 E-value=2.6e+02 Score=21.03 Aligned_cols=51 Identities=10% Similarity=0.145 Sum_probs=32.5
Q ss_pred cCCCCCCEEEEECCCCC--hHHHHHHHHHHhCCeEeccCCC--CCHHHHHHHhhhc
Q 019348 74 LGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPV--YTVSELSKQVKDS 125 (342)
Q Consensus 74 ~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~ 125 (342)
-|+.+|+.++|..+++. ..++..++. ..|..++.++.. .+.+++..+.+..
T Consensus 15 Ggi~~G~~~~i~G~~GsGKTtl~~~l~~-~~~~~v~~i~~~~~~~~~~~~~~~~~~ 69 (220)
T 2cvh_A 15 GGFAPGVLTQVYGPYASGKTTLALQTGL-LSGKKVAYVDTEGGFSPERLVQMAETR 69 (220)
T ss_dssp SSBCTTSEEEEECSTTSSHHHHHHHHHH-HHCSEEEEEESSCCCCHHHHHHHHHTT
T ss_pred CCCcCCEEEEEECCCCCCHHHHHHHHHH-HcCCcEEEEECCCCCCHHHHHHHHHhc
Confidence 37899999999999985 334444444 556555445443 3666776665544
No 242
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=20.69 E-value=2.5e+02 Score=24.24 Aligned_cols=53 Identities=23% Similarity=0.271 Sum_probs=31.0
Q ss_pred CCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCCC-----CHHHHHHHhhhcCceEEEE
Q 019348 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY-----TVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 76 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-----~~~~l~~~l~~~~~~~vi~ 132 (342)
+++||.|++..+ .+.....++...|+.++.++... ..+++...++. ++++|+.
T Consensus 107 ~~~gd~Vi~~~~---~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 164 (437)
T 3bb8_A 107 LKPGDEVITVAA---GFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD-KTKAIMI 164 (437)
T ss_dssp CCTTCEEEECSS---SCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCT-TEEEEEE
T ss_pred CCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCC-CCeEEEE
Confidence 678888776544 33344455566887766665432 45566666643 4566655
No 243
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=20.50 E-value=3.4e+02 Score=24.20 Aligned_cols=33 Identities=6% Similarity=-0.039 Sum_probs=21.0
Q ss_pred CCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC
Q 019348 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP 111 (342)
Q Consensus 78 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 111 (342)
.|.+|+|...+...+-++- .+..+|..++.+..
T Consensus 347 ~GKrv~i~g~~~~~~~la~-~L~ElGm~vv~~gt 379 (492)
T 3u7q_A 347 EGKRVMLYIGGLRPRHVIG-AYEDLGMEVVGTGY 379 (492)
T ss_dssp TTCEEEECBSSSHHHHTHH-HHHTTTCEEEEEEE
T ss_pred CCCEEEEECCCchHHHHHH-HHHHCCCEEEEEeC
Confidence 4778999877664443333 34688887776543
No 244
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=20.49 E-value=2.2e+02 Score=25.34 Aligned_cols=77 Identities=18% Similarity=0.159 Sum_probs=47.2
Q ss_pred CeEEEEccchhHHHHHHH-HHHHHhhcCCeEEEcc-CC---CHHHHHHHHHhcc-----ceEEEec-HHHHHHHHcCCCC
Q 019348 235 DHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMG-KF---DIEMALRAIEKYR-----VTVWWVV-PPIILALAKNSLV 303 (342)
Q Consensus 235 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~~-----~t~~~~~-P~~l~~l~~~~~~ 303 (342)
--++....|+.+...+.. -+..+|.+|.++++=+ +. ....+.+++++.+ ++++... +.+-+.|.+++
T Consensus 143 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~-- 220 (479)
T 2imp_A 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNP-- 220 (479)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCT--
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCC--
Confidence 346777777766655533 4778999999999854 33 3456667777652 2333332 23556676664
Q ss_pred CccCCCCceEEEeecc
Q 019348 304 RKFDISSLKLVGSGAA 319 (342)
Q Consensus 304 ~~~~l~~lr~~~~gG~ 319 (342)
.++.+.+.|+
T Consensus 221 ------~v~~V~fTGS 230 (479)
T 2imp_A 221 ------KVAMVSMTGS 230 (479)
T ss_dssp ------TEEEEEEESC
T ss_pred ------CcCEEEEeCC
Confidence 4677776664
No 245
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=20.49 E-value=3.7e+02 Score=22.36 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=27.5
Q ss_pred CCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCCC------CCHHHHHHHhhhcCceEEEE
Q 019348 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV------YTVSELSKQVKDSNPKLVIT 132 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~vi~ 132 (342)
++||.|++.-+....+ ..++...|+.++.++.. ...+++...++. ++++|+.
T Consensus 112 ~~gd~vl~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 169 (388)
T 1j32_A 112 EPGDEVIIPAPFWVSY---PEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-KTKLLVF 169 (388)
T ss_dssp CTTCEEEEESSCCTHH---HHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEE
T ss_pred CCCCEEEEcCCCChhH---HHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-CceEEEE
Confidence 5677777665544332 23344567655444332 245666666643 4555554
No 246
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=20.44 E-value=2.5e+02 Score=20.42 Aligned_cols=36 Identities=6% Similarity=-0.060 Sum_probs=31.0
Q ss_pred HHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEcc
Q 019348 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (342)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (342)
+-..|.-++-+....+.+++...+.+.+|++|..+.
T Consensus 42 l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~ 77 (161)
T 2yxb_A 42 LRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSI 77 (161)
T ss_dssp HHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 344788888899999999999999999999998764
No 247
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=20.33 E-value=3.6e+02 Score=22.76 Aligned_cols=55 Identities=9% Similarity=0.045 Sum_probs=25.9
Q ss_pred CCCCEEEEECCCCChHHHHHH-HHHHhCCeEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 77 TKKDVVLIFAPNSIHFPICFL-GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 77 ~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
++||.|++.-+........+- .+...|..++.++.. ..+++...++. ++++|+++
T Consensus 101 ~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~~~~v~~~ 156 (398)
T 2rfv_A 101 QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-KPEEIRAAMRP-ETKVVYIE 156 (398)
T ss_dssp CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-SHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 466666665443322222211 114556665555443 44555555543 45555543
No 248
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=20.17 E-value=2.4e+02 Score=23.31 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=37.4
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCC-eEeccCCCCCHHHHHHHhhhcCceEEEEc
Q 019348 68 SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQVKDSNPKLVITV 133 (342)
Q Consensus 68 a~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 133 (342)
...+...++++|++|+|...-+.-.+++ ..+...|+ ..+.++. ++ +-.+++++.+++.++..
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~ai-q~ak~~G~~~vi~~~~--~~-~k~~~a~~lGa~~~i~~ 212 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAI-QCAVALGAKSVTAIDI--SS-EKLALAKSFGAMQTFNS 212 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHH-HHHHHTTCSEEEEEES--CH-HHHHHHHHTTCSEEEET
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHH-HHHHHcCCcEEEEEec--hH-HHHHHHHHcCCeEEEeC
Confidence 3344666889999999997644444444 44455665 3344433 23 33456677888877754
No 249
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=20.15 E-value=1.2e+02 Score=17.39 Aligned_cols=19 Identities=21% Similarity=0.228 Sum_probs=14.5
Q ss_pred HHHcCCCCCCEEEEECCCC
Q 019348 71 FRHLGITKKDVVLIFAPNS 89 (342)
Q Consensus 71 L~~~g~~~g~~V~i~~~n~ 89 (342)
..++|+++||.|.+...++
T Consensus 21 r~~lgi~~Gd~v~i~~~~~ 39 (53)
T 2l66_A 21 RQKFQIKEGDLVKVTFDES 39 (53)
T ss_dssp HHHSCCCTTCEEEEEECSS
T ss_pred HHHcCcCCCCEEEEEEECC
Confidence 3567999999988876554
No 250
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=20.10 E-value=2.5e+02 Score=22.70 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=38.8
Q ss_pred CCHHHHHhhhcccCCCceEEEeCCCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCChH
Q 019348 27 FSMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 92 (342)
Q Consensus 27 ~~l~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~ 92 (342)
.++.+.+.+ .-|+...+...|+. ..-++.++.+++.+.+..|.+.|.+ ..++.=|+...
T Consensus 20 Ltv~~~i~~---~lp~~~~iy~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~----~iVIACNTa~~ 82 (268)
T 3out_A 20 LTIVKNLMS---ILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVK----AIIIACNTISA 82 (268)
T ss_dssp HHHHHHHHH---HCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCS----EEEECCHHHHH
T ss_pred HHHHHHHHH---HCCCCcEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCChHH
Confidence 455555554 34655555554432 5789999999999999999987653 44444445443
No 251
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=20.10 E-value=1.8e+02 Score=23.74 Aligned_cols=41 Identities=7% Similarity=0.007 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChHHHHHHHHHHhCCe
Q 019348 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (342)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (342)
..+...+.+.++.++..|.++|..+.....+..++..+|..
T Consensus 226 ~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~ 266 (296)
T 1rhs_A 226 EELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKP 266 (296)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 34555666668888889999999999888888888888863
No 252
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=20.09 E-value=1.5e+02 Score=24.56 Aligned_cols=78 Identities=10% Similarity=0.113 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCChHHHHHHHHHHhCCeEeccCC--CCCHHH---HHHHhhhcCceEE
Q 019348 58 SQFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--VYTVSE---LSKQVKDSNPKLV 130 (342)
Q Consensus 58 ~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~v 130 (342)
+++.++..++-..+++. .+....+..+...+...++.-.+++-..|.. -+.+ .-++.+ +...++..++++|
T Consensus 173 ~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~I 250 (313)
T 1toa_A 173 QAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQ--GVSTASEASAHDMQELAAFIAQRKLPAI 250 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEE--CSSCSSCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEee--ccCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 34444444444444332 3333345566677788888887777655432 2322 234454 4455677899999
Q ss_pred EEcccch
Q 019348 131 ITVPELW 137 (342)
Q Consensus 131 i~~~~~~ 137 (342)
|++...-
T Consensus 251 f~e~~~~ 257 (313)
T 1toa_A 251 FIESSIP 257 (313)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 9986543
Done!