Query 019349
Match_columns 342
No_of_seqs 335 out of 2776
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 14:43:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vu4_A KMHSV2; beta-propeller 100.0 2.5E-43 8.6E-48 319.0 38.0 308 4-332 16-347 (355)
2 1got_B GT-beta; complex (GTP-b 100.0 1.2E-38 4E-43 286.5 39.4 279 4-318 52-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 5.2E-39 1.8E-43 286.7 35.6 279 3-319 28-319 (321)
4 1vyh_C Platelet-activating fac 100.0 8.2E-39 2.8E-43 294.9 35.2 277 5-319 106-409 (410)
5 2pbi_B Guanine nucleotide-bind 100.0 1.2E-37 4.2E-42 281.5 38.6 281 4-318 61-354 (354)
6 1erj_A Transcriptional repress 100.0 7.2E-37 2.5E-41 280.3 38.1 285 5-322 62-390 (393)
7 4gqb_B Methylosome protein 50; 100.0 2.7E-37 9.3E-42 278.2 31.4 278 6-322 29-332 (344)
8 2ynn_A Coatomer subunit beta'; 100.0 3.7E-36 1.3E-40 266.1 37.0 241 4-261 10-262 (304)
9 3frx_A Guanine nucleotide-bind 100.0 4.9E-36 1.7E-40 267.1 36.9 286 3-322 13-318 (319)
10 3iz6_a 40S ribosomal protein R 100.0 7.9E-37 2.7E-41 278.8 28.5 288 4-321 63-375 (380)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-35 7E-40 266.0 36.3 292 4-323 12-337 (345)
12 2xzm_R RACK1; ribosome, transl 100.0 4.3E-35 1.5E-39 263.5 37.5 292 4-321 18-340 (343)
13 4ery_A WD repeat-containing pr 100.0 1E-34 3.4E-39 257.3 37.9 281 4-320 20-311 (312)
14 4gqb_B Methylosome protein 50; 100.0 1.7E-35 5.9E-40 266.3 33.4 238 7-260 82-333 (344)
15 4g56_B MGC81050 protein; prote 100.0 5.4E-36 1.9E-40 271.1 29.9 281 5-323 40-345 (357)
16 1nr0_A Actin interacting prote 100.0 1.2E-34 4.2E-39 280.2 39.1 245 4-261 56-358 (611)
17 3ow8_A WD repeat-containing pr 100.0 2.3E-34 7.7E-39 256.7 35.5 237 4-257 77-320 (321)
18 3zwl_B Eukaryotic translation 100.0 6.6E-34 2.3E-38 256.3 38.3 283 3-322 28-347 (369)
19 4aow_A Guanine nucleotide-bind 100.0 2E-34 6.8E-39 257.4 34.0 290 3-321 34-337 (340)
20 4g56_B MGC81050 protein; prote 100.0 1.2E-34 4.1E-39 262.3 29.9 241 5-261 92-346 (357)
21 1nr0_A Actin interacting prote 100.0 3.2E-34 1.1E-38 277.3 34.2 299 6-321 17-355 (611)
22 1vyh_C Platelet-activating fac 100.0 3.2E-34 1.1E-38 264.2 32.4 237 4-257 147-410 (410)
23 2hes_X YDR267CP; beta-propelle 100.0 2.3E-33 7.9E-38 251.0 35.1 283 4-321 11-328 (330)
24 4h5i_A Guanine nucleotide-exch 100.0 1.9E-33 6.4E-38 255.2 34.3 198 50-259 137-344 (365)
25 1sq9_A Antiviral protein SKI8; 100.0 1.6E-33 5.6E-38 257.1 31.1 302 3-321 12-395 (397)
26 1gxr_A ESG1, transducin-like e 100.0 3.7E-32 1.3E-36 242.0 38.5 275 5-320 49-336 (337)
27 2pm7_B Protein transport prote 100.0 5.2E-33 1.8E-37 245.0 31.9 241 3-258 5-285 (297)
28 2ymu_A WD-40 repeat protein; u 100.0 1.1E-32 3.7E-37 264.0 36.4 272 4-318 300-577 (577)
29 1r5m_A SIR4-interacting protei 100.0 4.2E-33 1.4E-37 255.8 31.0 293 6-320 107-424 (425)
30 1erj_A Transcriptional repress 100.0 2E-32 6.9E-37 250.8 35.2 237 8-259 124-390 (393)
31 3gre_A Serine/threonine-protei 100.0 7.2E-34 2.5E-38 263.3 24.9 301 4-318 60-437 (437)
32 2pm9_A Protein WEB1, protein t 100.0 2.3E-34 7.8E-39 264.3 21.1 303 5-322 65-415 (416)
33 3frx_A Guanine nucleotide-bind 100.0 8.1E-32 2.8E-36 239.8 36.1 238 4-259 62-318 (319)
34 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-32 5.3E-37 248.2 31.6 237 5-258 6-274 (372)
35 2ynn_A Coatomer subunit beta'; 100.0 2.2E-32 7.5E-37 241.8 31.8 245 40-321 7-259 (304)
36 3ei3_B DNA damage-binding prot 100.0 1.6E-32 5.4E-37 250.0 31.7 277 4-321 70-382 (383)
37 3dm0_A Maltose-binding peripla 100.0 2.2E-32 7.6E-37 268.2 34.9 298 4-320 379-692 (694)
38 3k26_A Polycomb protein EED; W 100.0 7.9E-33 2.7E-37 249.2 27.8 285 4-320 15-365 (366)
39 1got_B GT-beta; complex (GTP-b 100.0 3.5E-32 1.2E-36 244.3 31.9 233 5-255 95-340 (340)
40 3vl1_A 26S proteasome regulato 100.0 1.8E-33 6.3E-38 258.8 23.6 278 10-322 59-366 (420)
41 2pbi_B Guanine nucleotide-bind 100.0 3.5E-31 1.2E-35 239.2 36.0 233 6-255 105-354 (354)
42 3i2n_A WD repeat-containing pr 100.0 6.3E-32 2.2E-36 242.6 30.6 302 5-321 16-353 (357)
43 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-31 7.5E-36 246.9 33.8 280 5-323 131-416 (435)
44 3vl1_A 26S proteasome regulato 100.0 1.3E-31 4.6E-36 246.4 31.6 286 9-320 99-418 (420)
45 3dw8_B Serine/threonine-protei 100.0 3.6E-32 1.2E-36 252.1 27.6 242 6-261 27-376 (447)
46 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-32 4.8E-37 260.0 25.2 299 7-323 133-519 (524)
47 2ymu_A WD-40 repeat protein; u 100.0 6.3E-31 2.2E-35 251.8 36.4 273 4-319 259-537 (577)
48 4aez_A CDC20, WD repeat-contai 100.0 8.1E-31 2.8E-35 240.5 35.4 276 10-323 96-382 (401)
49 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-30 4.1E-35 230.0 34.3 274 4-323 15-298 (313)
50 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.4E-31 2.9E-35 235.8 32.1 245 4-263 58-340 (345)
51 1gxr_A ESG1, transducin-like e 100.0 1.3E-31 4.4E-36 238.5 26.5 274 7-321 9-296 (337)
52 3dwl_C Actin-related protein 2 100.0 5.1E-33 1.7E-37 252.4 17.4 234 6-257 10-280 (377)
53 4a11_B DNA excision repair pro 100.0 5.2E-31 1.8E-35 240.7 30.8 283 4-323 40-367 (408)
54 1r5m_A SIR4-interacting protei 100.0 1.2E-30 4.1E-35 239.4 33.1 279 6-323 44-363 (425)
55 4gga_A P55CDC, cell division c 100.0 3.6E-30 1.2E-34 237.7 36.3 275 9-323 107-397 (420)
56 3iz6_a 40S ribosomal protein R 100.0 1.4E-31 4.9E-36 244.0 26.1 241 5-260 106-377 (380)
57 2hes_X YDR267CP; beta-propelle 100.0 9.1E-31 3.1E-35 234.1 30.7 237 6-258 57-328 (330)
58 3jrp_A Fusion protein of prote 100.0 8.7E-31 3E-35 236.9 30.5 244 3-259 7-288 (379)
59 3bg1_A Protein SEC13 homolog; 100.0 1.4E-31 4.7E-36 238.0 24.3 238 3-257 9-292 (316)
60 4ery_A WD repeat-containing pr 100.0 5.9E-30 2E-34 226.5 34.3 238 4-257 62-311 (312)
61 1yfq_A Cell cycle arrest prote 100.0 7.8E-31 2.7E-35 234.4 28.8 275 4-318 8-321 (342)
62 1pgu_A Actin interacting prote 100.0 8.5E-30 2.9E-34 245.1 38.0 282 4-321 157-614 (615)
63 3v7d_B Cell division control p 100.0 5.5E-30 1.9E-34 239.0 34.6 270 5-321 119-421 (464)
64 4e54_B DNA damage-binding prot 100.0 9.6E-32 3.3E-36 249.4 22.5 241 5-261 117-390 (435)
65 2xzm_R RACK1; ribosome, transl 100.0 6.4E-30 2.2E-34 229.7 33.2 237 4-259 73-341 (343)
66 3sfz_A APAF-1, apoptotic pepti 100.0 4.9E-30 1.7E-34 266.4 36.9 238 4-258 612-913 (1249)
67 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-29 4.2E-34 235.7 35.8 280 4-322 156-443 (445)
68 4ggc_A P55CDC, cell division c 100.0 2.4E-29 8.2E-34 222.3 35.6 272 10-321 28-315 (318)
69 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.3E-30 2.8E-34 236.8 34.0 272 5-321 116-391 (445)
70 2pm9_A Protein WEB1, protein t 100.0 6.9E-32 2.4E-36 247.7 19.4 282 7-323 12-339 (416)
71 2pm7_B Protein transport prote 100.0 9.9E-30 3.4E-34 224.0 31.9 244 44-322 7-286 (297)
72 3f3f_A Nucleoporin SEH1; struc 100.0 9.5E-30 3.3E-34 226.6 31.6 243 4-261 8-340 (351)
73 3mkq_A Coatomer beta'-subunit; 100.0 1.1E-29 3.8E-34 252.7 35.3 281 4-321 10-302 (814)
74 1sq9_A Antiviral protein SKI8; 100.0 5.1E-30 1.7E-34 233.9 29.3 241 5-259 60-396 (397)
75 3v7d_B Cell division control p 100.0 8.5E-29 2.9E-33 230.9 37.8 237 4-262 159-425 (464)
76 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-29 1.4E-33 251.0 37.4 238 5-256 15-310 (902)
77 4gga_A P55CDC, cell division c 100.0 4.6E-29 1.6E-33 230.3 34.8 243 5-263 145-400 (420)
78 3k26_A Polycomb protein EED; W 100.0 5.3E-30 1.8E-34 230.6 27.3 238 5-257 67-365 (366)
79 4aez_A CDC20, WD repeat-contai 100.0 4.9E-29 1.7E-33 228.7 33.4 242 6-263 133-385 (401)
80 1pgu_A Actin interacting prote 100.0 2.8E-29 9.5E-34 241.6 31.8 239 5-261 16-286 (615)
81 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.1E-29 1.4E-33 232.7 31.7 234 8-256 5-337 (450)
82 3sfz_A APAF-1, apoptotic pepti 100.0 1.3E-30 4.6E-35 270.6 23.8 276 6-319 960-1247(1249)
83 3gre_A Serine/threonine-protei 100.0 2E-30 6.7E-35 240.2 22.0 282 14-323 34-361 (437)
84 3mmy_A MRNA export factor; mRN 100.0 9.3E-29 3.2E-33 222.4 31.6 242 3-259 35-347 (368)
85 3dm0_A Maltose-binding peripla 100.0 9.3E-29 3.2E-33 242.4 34.2 238 4-258 427-693 (694)
86 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-28 4.8E-33 247.1 35.6 300 4-334 148-674 (902)
87 3lrv_A PRE-mRNA-splicing facto 100.0 2.7E-29 9.4E-34 225.6 26.9 267 14-320 43-332 (343)
88 3bg1_A Protein SEC13 homolog; 100.0 2.6E-29 9E-34 223.3 25.9 247 42-322 9-294 (316)
89 3mkq_A Coatomer beta'-subunit; 100.0 6.8E-28 2.3E-32 239.7 38.6 242 5-260 53-304 (814)
90 4aow_A Guanine nucleotide-bind 100.0 1.4E-27 4.8E-32 212.9 36.5 240 4-260 83-339 (340)
91 3zwl_B Eukaryotic translation 100.0 1.1E-27 3.6E-32 215.6 33.3 245 4-260 71-348 (369)
92 3i2n_A WD repeat-containing pr 100.0 1.2E-28 4E-33 221.3 26.0 238 5-260 63-355 (357)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-28 4E-33 226.1 26.0 280 9-324 36-345 (402)
94 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-27 6E-32 209.7 32.4 233 5-262 57-300 (313)
95 3ei3_B DNA damage-binding prot 100.0 5.2E-28 1.8E-32 220.0 29.7 234 5-258 116-382 (383)
96 4ggc_A P55CDC, cell division c 100.0 4.1E-27 1.4E-31 207.9 34.1 239 4-259 64-316 (318)
97 2j04_B YDR362CP, TAU91; beta p 100.0 5.7E-29 1.9E-33 235.3 23.3 244 6-260 206-519 (524)
98 3jrp_A Fusion protein of prote 100.0 2.6E-27 8.9E-32 214.0 32.8 248 42-322 7-288 (379)
99 3jro_A Fusion protein of prote 100.0 1E-28 3.5E-33 244.2 24.1 245 3-260 5-287 (753)
100 1p22_A F-BOX/WD-repeat protein 100.0 8.3E-28 2.8E-32 222.8 28.2 233 4-261 170-417 (435)
101 1yfq_A Cell cycle arrest prote 100.0 1.2E-27 4E-32 213.7 27.9 235 5-256 54-322 (342)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-27 9.6E-32 216.9 27.3 241 4-260 78-344 (402)
103 2w18_A PALB2, fancn, partner a 100.0 8E-27 2.7E-31 205.0 28.8 272 9-319 41-355 (356)
104 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-26 4.1E-31 206.5 30.5 266 42-324 7-340 (351)
105 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-27 1.7E-31 212.0 28.2 243 42-321 4-274 (372)
106 3lrv_A PRE-mRNA-splicing facto 100.0 3.6E-27 1.2E-31 211.7 25.1 223 73-322 56-293 (343)
107 1l0q_A Surface layer protein; 100.0 4.5E-25 1.5E-29 201.0 39.3 237 7-261 31-278 (391)
108 2w18_A PALB2, fancn, partner a 100.0 9.4E-27 3.2E-31 204.6 26.7 176 73-256 155-355 (356)
109 3dwl_C Actin-related protein 2 100.0 3.1E-28 1E-32 220.9 17.9 239 4-256 52-377 (377)
110 3dw8_B Serine/threonine-protei 100.0 1.1E-26 3.7E-31 215.2 28.1 253 46-321 28-373 (447)
111 1l0q_A Surface layer protein; 100.0 1E-25 3.5E-30 205.2 34.0 262 20-321 3-275 (391)
112 4a11_B DNA excision repair pro 100.0 5.2E-26 1.8E-30 207.5 31.7 244 5-263 97-370 (408)
113 2xyi_A Probable histone-bindin 100.0 1.6E-26 5.6E-31 213.9 28.1 239 5-259 126-411 (430)
114 4e54_B DNA damage-binding prot 100.0 1.9E-27 6.5E-32 220.5 20.9 243 4-261 161-433 (435)
115 2xyi_A Probable histone-bindin 100.0 3.3E-26 1.1E-30 211.9 29.0 255 45-322 127-411 (430)
116 3bws_A Protein LP49; two-domai 100.0 2.9E-25 1E-29 204.9 32.8 273 8-320 123-431 (433)
117 4h5i_A Guanine nucleotide-exch 100.0 8.6E-26 2.9E-30 204.7 28.1 197 5-212 131-344 (365)
118 2j04_A TAU60, YPL007P, hypothe 99.9 7.1E-28 2.4E-32 224.5 13.8 259 7-320 15-296 (588)
119 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.7E-25 6E-30 208.1 27.9 256 47-319 5-337 (450)
120 3vu4_A KMHSV2; beta-propeller 99.9 1.7E-25 5.8E-30 201.9 26.8 234 9-261 60-339 (355)
121 3jro_A Fusion protein of prote 99.9 1.3E-25 4.4E-30 222.1 27.6 247 42-321 5-285 (753)
122 3bws_A Protein LP49; two-domai 99.9 3.5E-24 1.2E-28 197.7 34.4 236 5-258 167-432 (433)
123 4gq1_A NUP37; propeller, trans 99.9 2.3E-24 7.9E-29 197.2 26.0 215 73-319 109-387 (393)
124 4gq1_A NUP37; propeller, trans 99.9 5.5E-25 1.9E-29 201.4 21.4 233 9-257 91-388 (393)
125 3mmy_A MRNA export factor; mRN 99.9 2.9E-24 1E-28 193.0 23.6 242 44-322 37-347 (368)
126 2j04_A TAU60, YPL007P, hypothe 99.9 5.3E-25 1.8E-29 205.3 18.8 225 4-257 49-296 (588)
127 1nir_A Nitrite reductase; hemo 99.9 1.7E-21 5.7E-26 185.3 33.1 282 9-320 180-513 (543)
128 1nir_A Nitrite reductase; hemo 99.9 3.5E-21 1.2E-25 183.1 31.2 282 14-323 144-460 (543)
129 3vgz_A Uncharacterized protein 99.9 3.2E-20 1.1E-24 166.1 34.3 237 8-261 41-306 (353)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-21 4E-26 180.6 25.1 278 8-319 63-385 (415)
131 3u4y_A Uncharacterized protein 99.9 4.7E-20 1.6E-24 163.8 29.7 277 13-321 3-304 (331)
132 3u4y_A Uncharacterized protein 99.9 1.1E-19 3.6E-24 161.5 31.4 242 7-260 40-306 (331)
133 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-20 4.3E-25 185.8 24.5 235 7-257 36-366 (741)
134 1pby_B Quinohemoprotein amine 99.9 4.3E-20 1.5E-24 163.9 25.1 258 20-321 2-310 (337)
135 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.9E-19 1.3E-23 163.7 32.0 226 19-260 143-389 (415)
136 1pby_B Quinohemoprotein amine 99.9 1.3E-19 4.6E-24 160.7 26.5 240 9-261 35-313 (337)
137 1xfd_A DIP, dipeptidyl aminope 99.9 1.7E-20 5.9E-25 184.3 20.6 243 8-255 17-341 (723)
138 1ri6_A Putative isomerase YBHE 99.9 6.2E-19 2.1E-23 156.8 28.8 270 22-325 8-312 (343)
139 1ri6_A Putative isomerase YBHE 99.9 3.6E-19 1.2E-23 158.3 26.4 237 6-257 36-307 (343)
140 1jmx_B Amine dehydrogenase; ox 99.8 2.2E-19 7.5E-24 160.2 23.3 227 12-261 4-328 (349)
141 2z3z_A Dipeptidyl aminopeptida 99.8 3.8E-19 1.3E-23 174.4 26.6 237 8-259 82-392 (706)
142 3vgz_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 152.7 30.0 247 47-320 41-302 (353)
143 2z3z_A Dipeptidyl aminopeptida 99.8 3.1E-19 1.1E-23 175.0 22.9 234 9-257 27-341 (706)
144 2oit_A Nucleoporin 214KDA; NH2 99.8 4.3E-19 1.5E-23 164.2 22.4 163 91-260 89-280 (434)
145 2ecf_A Dipeptidyl peptidase IV 99.8 6.1E-19 2.1E-23 173.7 24.6 234 9-258 110-413 (741)
146 3hfq_A Uncharacterized protein 99.8 6.3E-18 2.2E-22 151.3 28.5 235 8-257 40-316 (347)
147 3o4h_A Acylamino-acid-releasin 99.8 6.1E-19 2.1E-23 169.2 23.1 232 8-256 22-274 (582)
148 2ojh_A Uncharacterized protein 99.8 1E-18 3.5E-23 151.6 21.9 233 6-249 40-293 (297)
149 3scy_A Hypothetical bacterial 99.8 1.5E-17 5E-22 149.8 28.1 235 7-258 49-337 (361)
150 2ojh_A Uncharacterized protein 99.8 5.4E-18 1.9E-22 147.0 24.2 213 30-261 24-261 (297)
151 1k32_A Tricorn protease; prote 99.8 1.3E-17 4.4E-22 170.5 26.8 233 5-260 201-463 (1045)
152 3hfq_A Uncharacterized protein 99.8 3.3E-16 1.1E-20 140.1 32.8 271 28-326 16-322 (347)
153 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-17 4.3E-22 148.8 22.4 215 73-320 19-324 (349)
154 1k32_A Tricorn protease; prote 99.8 5E-17 1.7E-21 166.1 29.7 229 9-258 246-502 (1045)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 3E-17 1E-21 148.3 24.8 248 8-259 40-342 (365)
156 3scy_A Hypothetical bacterial 99.8 4.6E-16 1.6E-20 140.0 31.9 285 15-325 9-341 (361)
157 2oit_A Nucleoporin 214KDA; NH2 99.8 8E-18 2.7E-22 155.7 19.4 170 75-257 23-222 (434)
158 1q7f_A NHL, brain tumor CG1071 99.8 3.4E-15 1.2E-19 129.8 34.7 238 6-260 28-282 (286)
159 3pe7_A Oligogalacturonate lyas 99.8 1.8E-16 6.2E-21 143.7 24.8 234 13-260 41-331 (388)
160 1xfd_A DIP, dipeptidyl aminope 99.8 1.2E-16 4.2E-21 156.8 24.7 238 9-259 62-394 (723)
161 3o4h_A Acylamino-acid-releasin 99.8 1.3E-16 4.3E-21 153.1 23.8 195 47-261 22-230 (582)
162 1z68_A Fibroblast activation p 99.8 4.2E-18 1.4E-22 167.3 13.8 243 12-259 20-347 (719)
163 3fvz_A Peptidyl-glycine alpha- 99.7 1.3E-14 4.5E-19 129.1 29.6 239 7-260 23-324 (329)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 7.7E-15 2.6E-19 132.5 28.4 272 22-322 5-342 (365)
165 3c5m_A Oligogalacturonate lyas 99.7 3.8E-15 1.3E-19 135.1 25.5 283 10-326 38-387 (396)
166 4a5s_A Dipeptidyl peptidase 4 99.7 5.1E-16 1.7E-20 153.1 21.1 247 9-260 18-355 (740)
167 3dsm_A Uncharacterized protein 99.6 7.5E-13 2.6E-17 117.7 30.1 213 28-261 17-256 (328)
168 3dsm_A Uncharacterized protein 99.6 9.3E-13 3.2E-17 117.1 29.4 232 9-257 45-301 (328)
169 2gop_A Trilobed protease; beta 99.6 4.1E-13 1.4E-17 119.7 26.2 228 9-257 60-330 (347)
170 1z68_A Fibroblast activation p 99.6 5.6E-14 1.9E-18 137.9 22.2 234 9-258 61-391 (719)
171 1q7f_A NHL, brain tumor CG1071 99.6 2.7E-12 9.2E-17 111.4 30.3 191 49-257 32-237 (286)
172 2oiz_A Aromatic amine dehydrog 99.6 3.3E-13 1.1E-17 121.7 25.2 228 12-259 54-335 (361)
173 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-12 4.8E-17 115.9 27.3 223 75-322 69-323 (329)
174 3pe7_A Oligogalacturonate lyas 99.6 1.3E-13 4.5E-18 124.8 19.7 244 9-258 82-382 (388)
175 4a5s_A Dipeptidyl peptidase 4 99.6 7.2E-13 2.5E-17 130.6 25.3 192 51-260 21-296 (740)
176 3no2_A Uncharacterized protein 99.6 4E-12 1.4E-16 110.1 26.2 177 73-261 13-198 (276)
177 3azo_A Aminopeptidase; POP fam 99.5 1.6E-12 5.6E-17 126.2 25.4 238 6-257 22-322 (662)
178 2dg1_A DRP35, lactonase; beta 99.5 5.8E-12 2E-16 111.6 26.1 236 7-257 5-262 (333)
179 2z2n_A Virginiamycin B lyase; 99.5 2E-10 6.8E-15 99.6 35.5 232 5-257 12-254 (299)
180 3e5z_A Putative gluconolactona 99.5 2.1E-11 7.1E-16 106.4 29.1 229 7-259 27-287 (296)
181 2xdw_A Prolyl endopeptidase; a 99.5 1.1E-11 3.6E-16 121.7 30.0 244 9-260 126-416 (710)
182 1qks_A Cytochrome CD1 nitrite 99.5 1.3E-10 4.4E-15 110.6 35.5 233 16-259 164-422 (567)
183 1qks_A Cytochrome CD1 nitrite 99.5 1.2E-10 3.9E-15 110.9 34.9 234 8-259 197-478 (567)
184 2oiz_A Aromatic amine dehydrog 99.5 2.1E-12 7.2E-17 116.4 21.0 214 9-237 109-360 (361)
185 1rwi_B Serine/threonine-protei 99.5 1.6E-11 5.4E-16 105.3 24.8 234 9-261 25-267 (270)
186 3azo_A Aminopeptidase; POP fam 99.5 2.9E-12 9.8E-17 124.5 21.6 242 57-323 32-325 (662)
187 2dg1_A DRP35, lactonase; beta 99.5 2.1E-10 7.3E-15 101.5 31.6 230 7-249 44-301 (333)
188 3c5m_A Oligogalacturonate lyas 99.5 7.2E-12 2.5E-16 113.4 22.2 235 12-257 85-381 (396)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.2E-10 7.6E-15 100.3 31.0 231 9-258 19-299 (314)
190 2gop_A Trilobed protease; beta 99.5 3.2E-11 1.1E-15 107.4 25.5 223 8-257 15-290 (347)
191 3no2_A Uncharacterized protein 99.5 7.4E-11 2.5E-15 102.1 26.8 223 17-258 3-251 (276)
192 2mad_H Methylamine dehydrogena 99.5 4E-10 1.4E-14 101.8 32.1 235 12-263 70-355 (373)
193 2bkl_A Prolyl endopeptidase; m 99.4 6.1E-12 2.1E-16 123.1 19.4 243 8-260 121-399 (695)
194 3sjl_D Methylamine dehydrogena 99.4 1.9E-10 6.6E-15 103.3 26.4 237 12-263 82-368 (386)
195 2xdw_A Prolyl endopeptidase; a 99.4 2.5E-10 8.5E-15 112.0 28.3 205 49-259 127-369 (710)
196 1yr2_A Prolyl oligopeptidase; 99.4 4.4E-10 1.5E-14 110.7 29.9 241 9-260 164-443 (741)
197 3hrp_A Uncharacterized protein 99.4 1E-09 3.6E-14 100.4 29.8 237 8-257 131-409 (409)
198 3e5z_A Putative gluconolactona 99.4 4.8E-10 1.6E-14 97.7 25.6 191 49-257 30-245 (296)
199 2qc5_A Streptogramin B lactona 99.4 2.2E-08 7.6E-13 86.6 35.3 232 5-257 17-259 (300)
200 2z2n_A Virginiamycin B lyase; 99.3 2.5E-08 8.4E-13 86.3 34.8 232 6-259 55-296 (299)
201 3g4e_A Regucalcin; six bladed 99.3 3.7E-09 1.3E-13 92.3 27.9 219 10-247 15-261 (297)
202 1xip_A Nucleoporin NUP159; bet 99.3 2.5E-10 8.6E-15 102.9 20.6 170 7-196 37-230 (388)
203 1rwi_B Serine/threonine-protei 99.3 8.5E-10 2.9E-14 94.4 23.2 220 74-324 45-267 (270)
204 2mad_H Methylamine dehydrogena 99.3 1.5E-08 5.2E-13 91.4 32.4 273 14-321 27-350 (373)
205 1xip_A Nucleoporin NUP159; bet 99.3 3.1E-10 1.1E-14 102.3 20.3 174 48-246 39-232 (388)
206 3iuj_A Prolyl endopeptidase; h 99.3 1.6E-09 5.5E-14 105.9 26.8 245 6-260 127-407 (693)
207 2bkl_A Prolyl endopeptidase; m 99.3 1.5E-09 5.1E-14 106.2 24.8 232 16-257 76-348 (695)
208 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.1E-08 3.8E-13 92.1 27.7 259 18-318 102-375 (376)
209 2ghs_A AGR_C_1268P; regucalcin 99.2 3.7E-08 1.3E-12 87.1 30.3 217 10-248 51-292 (326)
210 3c75_H MADH, methylamine dehyd 99.2 2.6E-09 8.9E-14 97.5 23.2 237 12-263 122-407 (426)
211 3g4e_A Regucalcin; six bladed 99.2 6.6E-08 2.3E-12 84.2 29.5 195 53-260 19-231 (297)
212 2qc5_A Streptogramin B lactona 99.2 2.1E-07 7.1E-12 80.4 32.1 228 7-257 61-299 (300)
213 2hz6_A Endoplasmic reticulum t 99.2 5.1E-12 1.7E-16 114.2 2.7 259 18-321 8-279 (369)
214 3q7m_A Lipoprotein YFGL, BAMB; 99.2 5.4E-08 1.9E-12 87.6 29.0 220 19-261 53-299 (376)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 6E-08 2E-12 84.6 28.3 177 74-260 45-258 (314)
216 3c75_H MADH, methylamine dehyd 99.1 8.6E-09 3E-13 94.1 22.3 271 17-320 82-401 (426)
217 3sjl_D Methylamine dehydrogena 99.1 1.9E-08 6.6E-13 90.3 24.1 275 11-319 36-361 (386)
218 1yr2_A Prolyl oligopeptidase; 99.1 1.4E-08 4.8E-13 100.0 24.9 234 16-257 115-392 (741)
219 2qe8_A Uncharacterized protein 99.1 7.1E-09 2.4E-13 92.5 20.7 240 8-255 17-318 (343)
220 1kb0_A Quinohemoprotein alcoho 99.1 5.9E-09 2E-13 101.4 21.5 191 19-219 77-354 (677)
221 1kb0_A Quinohemoprotein alcoho 99.1 2.6E-08 9E-13 96.9 25.8 235 18-263 127-512 (677)
222 2ece_A 462AA long hypothetical 99.1 5.4E-07 1.8E-11 81.8 31.5 193 58-259 95-353 (462)
223 3dr2_A Exported gluconolactona 99.1 7.4E-08 2.5E-12 84.2 25.4 220 8-250 45-299 (305)
224 1mda_H Methylamine dehydrogena 99.1 1.5E-09 5E-14 97.5 14.5 228 12-263 69-351 (368)
225 1yiq_A Quinohemoprotein alcoho 99.1 1.8E-08 6.2E-13 98.2 23.2 190 19-218 70-345 (689)
226 2iwa_A Glutamine cyclotransfer 99.1 2.1E-07 7.1E-12 79.3 26.8 176 74-259 43-238 (266)
227 2iwa_A Glutamine cyclotransfer 99.1 2.7E-07 9.1E-12 78.6 26.9 191 10-211 23-237 (266)
228 3nok_A Glutaminyl cyclase; bet 99.0 5.4E-08 1.8E-12 82.1 20.9 172 56-246 62-253 (268)
229 2ece_A 462AA long hypothetical 99.0 4.4E-07 1.5E-11 82.4 28.2 226 16-246 90-399 (462)
230 2ghs_A AGR_C_1268P; regucalcin 99.0 1.1E-06 3.9E-11 77.5 30.5 189 53-257 55-259 (326)
231 2hz6_A Endoplasmic reticulum t 99.0 6.5E-11 2.2E-15 106.9 2.8 171 74-261 18-195 (369)
232 3nol_A Glutamine cyclotransfer 99.0 1.5E-07 5E-12 79.5 23.0 161 75-247 65-244 (262)
233 3mbr_X Glutamine cyclotransfer 99.0 4.6E-07 1.6E-11 75.7 24.5 175 57-247 29-223 (243)
234 1yiq_A Quinohemoprotein alcoho 99.0 5.5E-07 1.9E-11 87.8 27.4 233 19-262 121-509 (689)
235 3nol_A Glutamine cyclotransfer 98.9 3.4E-07 1.1E-11 77.3 21.6 182 10-201 45-246 (262)
236 3hrp_A Uncharacterized protein 98.9 1.4E-06 4.7E-11 79.6 27.0 178 74-260 151-356 (409)
237 3hxj_A Pyrrolo-quinoline quino 98.9 2.9E-08 1E-12 87.3 13.6 216 12-256 24-242 (330)
238 3mbr_X Glutamine cyclotransfer 98.8 5.3E-06 1.8E-10 69.3 25.2 182 9-200 22-224 (243)
239 3nok_A Glutaminyl cyclase; bet 98.8 9.7E-07 3.3E-11 74.5 20.1 178 10-198 57-253 (268)
240 3iuj_A Prolyl endopeptidase; h 98.8 1.2E-06 4E-11 85.6 23.5 200 49-259 131-360 (693)
241 2ad6_A Methanol dehydrogenase 98.8 1.7E-06 5.9E-11 82.4 23.9 232 19-261 115-497 (571)
242 3dr2_A Exported gluconolactona 98.8 5.2E-06 1.8E-10 72.3 24.5 188 51-257 49-266 (305)
243 2ad6_A Methanol dehydrogenase 98.7 3.8E-06 1.3E-10 80.0 24.8 192 19-219 62-343 (571)
244 3hxj_A Pyrrolo-quinoline quino 98.7 8.5E-07 2.9E-11 77.8 18.8 215 19-260 107-326 (330)
245 1npe_A Nidogen, entactin; glyc 98.7 8.7E-05 3E-09 63.1 31.6 227 19-261 1-241 (267)
246 1kv9_A Type II quinohemoprotei 98.7 2.3E-06 7.9E-11 83.1 22.4 190 19-218 66-340 (668)
247 2qe8_A Uncharacterized protein 98.7 1.3E-06 4.4E-11 77.7 17.5 155 95-257 67-277 (343)
248 1mda_H Methylamine dehydrogena 98.6 1.6E-06 5.4E-11 77.7 16.9 216 29-263 47-308 (368)
249 1w6s_A Methanol dehydrogenase 98.6 1.7E-05 5.9E-10 75.7 24.7 192 19-219 62-350 (599)
250 1w6s_A Methanol dehydrogenase 98.6 2.4E-05 8.1E-10 74.7 25.6 229 22-261 124-506 (599)
251 2fp8_A Strictosidine synthase; 98.6 5.5E-05 1.9E-09 66.3 25.8 232 9-259 20-314 (322)
252 1fwx_A Nitrous oxide reductase 98.6 6.8E-06 2.3E-10 77.2 20.4 186 57-258 100-361 (595)
253 1fwx_A Nitrous oxide reductase 98.5 4.5E-05 1.5E-09 71.7 24.8 235 17-260 99-433 (595)
254 1flg_A Protein (quinoprotein e 98.5 6.2E-05 2.1E-09 71.8 26.3 194 18-220 68-364 (582)
255 1npe_A Nidogen, entactin; glyc 98.5 0.00041 1.4E-08 58.8 30.0 216 9-237 37-263 (267)
256 2xzh_A Clathrin heavy chain 1; 98.5 0.00051 1.8E-08 59.4 30.9 219 30-261 51-293 (365)
257 1bpo_A Protein (clathrin); cla 98.4 0.0009 3.1E-08 60.2 30.4 219 30-261 50-292 (494)
258 4a2l_A BT_4663, two-component 98.4 0.0019 6.4E-08 63.9 34.6 232 6-259 355-615 (795)
259 3amr_A 3-phytase; beta-propell 98.4 0.00035 1.2E-08 61.4 24.8 177 73-257 48-262 (355)
260 4a2l_A BT_4663, two-component 98.4 0.00033 1.1E-08 69.3 27.6 231 7-259 262-527 (795)
261 2p4o_A Hypothetical protein; p 98.3 0.0011 3.8E-08 57.5 32.0 226 8-249 32-279 (306)
262 1flg_A Protein (quinoprotein e 98.3 0.00084 2.9E-08 63.9 28.8 234 19-261 117-519 (582)
263 1kv9_A Type II quinohemoprotei 98.3 5.7E-05 2E-09 73.3 19.7 186 74-261 75-336 (668)
264 3v9f_A Two-component system se 98.2 0.0017 5.8E-08 64.1 27.7 234 6-259 311-569 (781)
265 3v65_B Low-density lipoprotein 98.1 0.004 1.4E-07 56.0 31.8 235 11-260 80-320 (386)
266 3v9f_A Two-component system se 98.1 0.011 3.6E-07 58.4 34.0 234 7-259 65-343 (781)
267 2xe4_A Oligopeptidase B; hydro 98.0 0.00054 1.9E-08 67.4 21.2 244 9-259 175-459 (751)
268 3v64_C Agrin; beta propeller, 98.0 0.0063 2.2E-07 53.9 33.2 236 9-260 35-277 (349)
269 1ijq_A LDL receptor, low-densi 98.0 0.0066 2.3E-07 52.9 33.6 227 21-261 3-241 (316)
270 3p5b_L Low density lipoprotein 97.9 0.01 3.5E-07 53.6 33.9 229 20-261 84-323 (400)
271 3tc9_A Hypothetical hydrolase; 97.9 0.012 3.9E-07 53.8 27.8 239 9-257 138-429 (430)
272 4hw6_A Hypothetical protein, I 97.9 0.012 4.1E-07 53.7 27.7 239 9-257 140-432 (433)
273 2fp8_A Strictosidine synthase; 97.9 0.005 1.7E-07 53.6 22.7 174 74-257 39-268 (322)
274 3qqz_A Putative uncharacterize 97.9 0.0083 2.8E-07 50.5 22.8 158 95-259 27-205 (255)
275 3v65_B Low-density lipoprotein 97.9 0.013 4.5E-07 52.6 26.0 177 74-258 95-277 (386)
276 3amr_A 3-phytase; beta-propell 97.8 0.0095 3.3E-07 52.3 23.1 184 24-219 46-272 (355)
277 3kya_A Putative phosphatase; s 97.8 0.021 7.3E-07 52.8 27.4 246 9-261 140-478 (496)
278 3qqz_A Putative uncharacterize 97.8 0.012 3.9E-07 49.6 27.5 197 47-255 27-250 (255)
279 2p4o_A Hypothetical protein; p 97.8 0.008 2.7E-07 52.0 21.7 188 51-257 36-241 (306)
280 1k3i_A Galactose oxidase precu 97.8 0.0036 1.2E-07 60.5 21.0 236 12-259 190-498 (656)
281 3m0c_C LDL receptor, low-densi 97.7 0.05 1.7E-06 53.5 33.6 228 20-260 396-634 (791)
282 1ijq_A LDL receptor, low-densi 97.7 0.024 8.1E-07 49.3 28.3 176 74-258 9-195 (316)
283 1k3i_A Galactose oxidase precu 97.6 0.0081 2.8E-07 58.0 20.9 230 12-247 247-530 (656)
284 3v64_C Agrin; beta propeller, 97.6 0.034 1.2E-06 49.1 28.0 176 74-258 52-234 (349)
285 2xbg_A YCF48-like protein; pho 97.6 0.034 1.2E-06 48.5 28.0 222 6-251 34-272 (327)
286 3pbp_A Nucleoporin NUP82; beta 97.6 0.0074 2.5E-07 54.2 18.2 145 102-254 30-208 (452)
287 3p5b_L Low density lipoprotein 97.6 0.044 1.5E-06 49.4 26.2 177 74-259 91-278 (400)
288 1xi4_A Clathrin heavy chain; a 97.5 0.0072 2.5E-07 62.2 19.9 220 30-262 50-293 (1630)
289 2xe4_A Oligopeptidase B; hydro 97.5 0.0017 5.8E-08 63.8 15.2 116 137-259 175-305 (751)
290 3m0c_C LDL receptor, low-densi 97.5 0.087 3E-06 51.9 26.4 177 74-259 403-590 (791)
291 3sov_A LRP-6, low-density lipo 97.4 0.057 2E-06 47.0 31.5 227 21-261 6-241 (318)
292 2p9w_A MAL S 1 allergenic prot 97.3 0.03 1E-06 48.7 18.9 156 98-259 16-216 (334)
293 3tc9_A Hypothetical hydrolase; 97.3 0.032 1.1E-06 50.8 19.5 153 96-258 138-301 (430)
294 1n7d_A LDL receptor, low-densi 97.2 0.0013 4.4E-08 64.1 10.3 225 22-260 380-616 (699)
295 3ott_A Two-component system se 97.2 0.21 7.1E-06 48.9 25.3 228 6-258 20-260 (758)
296 3pbp_A Nucleoporin NUP82; beta 97.0 0.081 2.8E-06 47.6 18.8 101 158-260 40-160 (452)
297 1bpo_A Protein (clathrin); cla 97.0 0.19 6.6E-06 45.3 28.0 226 74-321 47-289 (494)
298 4hw6_A Hypothetical protein, I 96.9 0.047 1.6E-06 49.8 16.5 155 96-258 140-304 (433)
299 2vpj_A Kelch-like protein 12; 96.8 0.19 6.3E-06 42.9 21.0 229 18-258 14-278 (301)
300 3kya_A Putative phosphatase; s 96.8 0.087 3E-06 48.7 18.0 156 97-257 141-340 (496)
301 3ei3_A DNA damage-binding prot 96.7 0.65 2.2E-05 47.7 31.1 170 75-258 807-999 (1158)
302 2p9w_A MAL S 1 allergenic prot 96.7 0.28 9.4E-06 42.7 21.8 189 53-256 19-263 (334)
303 3ott_A Two-component system se 96.6 0.62 2.1E-05 45.5 27.9 223 7-254 62-303 (758)
304 2xbg_A YCF48-like protein; pho 96.5 0.38 1.3E-05 41.8 26.2 151 94-255 162-319 (327)
305 3sre_A PON1, serum paraoxonase 96.5 0.34 1.2E-05 42.7 18.6 137 112-258 82-252 (355)
306 1n7d_A LDL receptor, low-densi 96.4 0.0089 3.1E-07 58.2 8.9 176 74-258 385-571 (699)
307 3ii7_A Kelch-like protein 7; p 96.3 0.46 1.6E-05 40.5 21.9 225 20-259 13-273 (306)
308 2xn4_A Kelch-like protein 2; s 96.2 0.48 1.6E-05 40.3 20.3 228 18-259 15-277 (302)
309 1xi4_A Clathrin heavy chain; a 96.0 0.26 8.8E-06 51.1 17.0 221 74-321 47-289 (1630)
310 3s94_A LRP-6, low-density lipo 96.0 1.1 3.9E-05 42.7 27.4 225 21-261 11-246 (619)
311 4asc_A Kelch repeat and BTB do 96.0 0.66 2.3E-05 39.8 23.1 186 22-213 8-223 (315)
312 4a0p_A LRP6, LRP-6, low-densit 95.9 1.3 4.5E-05 42.3 33.0 225 20-260 7-239 (628)
313 3ei3_A DNA damage-binding prot 95.9 2 6.8E-05 44.2 32.1 138 74-215 491-642 (1158)
314 3sov_A LRP-6, low-density lipo 95.8 0.86 3E-05 39.4 28.2 198 10-218 37-245 (318)
315 3sre_A PON1, serum paraoxonase 95.7 0.98 3.3E-05 39.8 20.3 172 73-255 81-295 (355)
316 1zgk_A Kelch-like ECH-associat 95.7 0.85 2.9E-05 39.0 18.8 232 15-259 21-288 (308)
317 2be1_A Serine/threonine-protei 95.5 0.13 4.4E-06 45.1 11.0 112 107-221 13-140 (339)
318 3s94_A LRP-6, low-density lipo 95.4 2 6.7E-05 41.0 31.1 145 107-258 320-467 (619)
319 2be1_A Serine/threonine-protei 95.4 0.52 1.8E-05 41.2 14.5 107 21-132 12-140 (339)
320 2xzh_A Clathrin heavy chain 1; 94.9 1.7 5.9E-05 37.7 30.4 231 12-260 71-334 (365)
321 4a0p_A LRP6, LRP-6, low-densit 94.7 3 0.0001 39.8 28.2 175 74-259 14-198 (628)
322 3ii7_A Kelch-like protein 7; p 94.2 2.3 7.7E-05 36.1 20.0 187 59-259 12-226 (306)
323 2vpj_A Kelch-like protein 12; 93.9 2.6 8.8E-05 35.6 20.6 177 74-259 30-232 (301)
324 1tl2_A L10, protein (tachylect 92.4 1.1 3.8E-05 36.5 9.8 102 138-252 43-157 (236)
325 3q6k_A 43.2 kDa salivary prote 92.3 5.8 0.0002 35.2 17.9 96 158-258 180-306 (381)
326 1zgk_A Kelch-like ECH-associat 92.2 4.9 0.00017 34.1 17.7 190 59-259 25-241 (308)
327 3s25_A Hypothetical 7-bladed b 91.8 5.5 0.00019 34.0 16.2 102 144-260 61-178 (302)
328 4gq2_M Nucleoporin NUP120; bet 91.7 4.2 0.00014 40.9 15.3 33 226-261 237-269 (950)
329 3a9g_A Putative uncharacterize 91.5 6.6 0.00023 34.3 14.9 100 138-246 31-153 (354)
330 2ism_A Putative oxidoreductase 91.2 7 0.00024 34.1 14.8 100 138-246 33-153 (352)
331 1cru_A Protein (soluble quinop 91.1 8.7 0.0003 34.9 21.2 104 96-199 28-163 (454)
332 1cru_A Protein (soluble quinop 90.9 6.6 0.00023 35.7 14.6 103 137-246 28-162 (454)
333 4asc_A Kelch repeat and BTB do 90.5 7.4 0.00025 33.0 18.6 184 12-200 39-253 (315)
334 2zwa_A Leucine carboxyl methyl 90.4 13 0.00045 35.8 19.0 195 59-259 398-636 (695)
335 2ism_A Putative oxidoreductase 90.3 8.7 0.0003 33.5 24.6 26 9-34 32-57 (352)
336 2zwa_A Leucine carboxyl methyl 90.1 14 0.00048 35.6 18.5 196 17-214 396-638 (695)
337 2xn4_A Kelch-like protein 2; s 89.7 8.3 0.00028 32.4 19.1 176 75-259 30-230 (302)
338 3das_A Putative oxidoreductase 88.5 10 0.00035 33.1 13.3 102 138-246 34-158 (347)
339 2uvk_A YJHT; unknown function, 88.4 12 0.0004 32.4 15.0 139 75-218 168-349 (357)
340 3das_A Putative oxidoreductase 87.8 13 0.00046 32.4 18.2 136 95-237 32-214 (347)
341 2woz_A Kelch repeat and BTB do 87.6 12 0.00041 31.6 23.5 186 21-213 18-233 (318)
342 2g8s_A Glucose/sorbosone dehyd 85.3 18 0.00061 31.4 15.3 143 95-244 18-214 (353)
343 3sbq_A Nitrous-oxide reductase 84.5 5.2 0.00018 37.4 9.4 69 141-212 328-409 (638)
344 1tl2_A L10, protein (tachylect 84.0 4.1 0.00014 33.2 7.6 65 180-255 41-113 (236)
345 3q6k_A 43.2 kDa salivary prote 83.6 23 0.00079 31.3 23.3 151 58-211 97-306 (381)
346 4gq2_M Nucleoporin NUP120; bet 83.3 13 0.00046 37.2 12.8 37 181-218 237-273 (950)
347 2woz_A Kelch repeat and BTB do 80.4 25 0.00086 29.6 18.6 179 14-200 52-263 (318)
348 2wg3_C Hedgehog-interacting pr 79.6 36 0.0012 30.9 13.5 103 138-247 16-158 (463)
349 4gz8_A Semaphorin-3A; multi-do 77.5 16 0.00054 35.0 10.5 69 182-253 414-495 (667)
350 4fhn_B Nucleoporin NUP120; pro 75.4 8 0.00027 39.7 8.4 31 227-260 240-270 (1139)
351 2uvk_A YJHT; unknown function, 74.7 40 0.0014 28.8 15.5 61 58-123 19-96 (357)
352 3uc1_A DNA gyrase subunit A; D 74.6 41 0.0014 28.9 19.1 153 146-320 108-278 (327)
353 3sbq_A Nitrous-oxide reductase 73.7 8.9 0.0003 35.9 7.3 72 182-259 325-409 (638)
354 3a9g_A Putative uncharacterize 72.9 46 0.0016 28.8 26.1 62 180-246 259-330 (354)
355 1q47_A Semaphorin 3A; beta pro 70.9 16 0.00054 33.6 8.5 70 181-253 405-487 (495)
356 3no0_A DNA gyrase subunit A; D 69.8 48 0.0016 27.7 16.5 149 147-320 80-245 (276)
357 3zwu_A Alkaline phosphatase PH 64.8 28 0.00094 32.8 8.9 60 182-245 478-548 (592)
358 3qhy_B Beta-lactamase inhibito 64.4 62 0.0021 27.0 14.9 144 95-258 24-168 (282)
359 3qhy_B Beta-lactamase inhibito 62.5 67 0.0023 26.7 15.5 165 74-258 41-207 (282)
360 4hvt_A Ritya.17583.B, post-pro 56.3 1.4E+02 0.005 28.6 21.7 239 10-257 131-429 (711)
361 4a9v_A PHOX; hydrolase, beta-p 55.9 57 0.0019 30.6 9.1 61 181-245 477-548 (592)
362 2wg3_C Hedgehog-interacting pr 54.7 1.2E+02 0.0042 27.3 13.7 104 96-200 15-159 (463)
363 3f7f_A Nucleoporin NUP120; nuc 52.3 22 0.00076 34.3 5.9 34 53-93 226-259 (729)
364 1olz_A Semaphorin 4D; developm 51.8 1.1E+02 0.0039 29.1 10.8 70 181-253 398-477 (663)
365 4fhn_B Nucleoporin NUP120; pro 50.3 15 0.0005 37.8 4.7 38 181-219 239-276 (1139)
366 3nvq_A Semaphorin-7A; beta-pro 46.2 64 0.0022 30.3 7.9 60 192-254 381-445 (590)
367 2zux_A YESW protein; beta-prop 45.3 2E+02 0.0067 26.9 17.5 168 76-259 230-442 (591)
368 3f7f_A Nucleoporin NUP120; nuc 45.2 37 0.0013 32.7 6.3 70 181-260 223-307 (729)
369 3kvp_A Uncharacterized protein 44.5 50 0.0017 20.9 4.6 29 303-335 30-58 (72)
370 3no0_A DNA gyrase subunit A; D 44.4 1.4E+02 0.0046 24.8 13.1 122 179-320 67-195 (276)
371 3al9_A Plexin-A2; beta-propell 43.0 65 0.0022 29.9 7.5 69 181-253 401-476 (539)
372 3oky_B Putative uncharacterize 34.1 2.1E+02 0.007 26.7 9.2 71 181-254 404-496 (565)
373 4hvt_A Ritya.17583.B, post-pro 33.8 3.3E+02 0.011 26.2 11.2 94 73-167 318-429 (711)
374 3zwu_A Alkaline phosphatase PH 33.0 1.6E+02 0.0055 27.6 8.5 39 159-197 509-548 (592)
375 4a9v_A PHOX; hydrolase, beta-p 30.5 1.9E+02 0.0066 27.1 8.3 39 160-198 510-549 (592)
376 1zvt_A Topoisomerase IV subuni 30.0 2.3E+02 0.0077 23.1 11.7 147 157-321 10-163 (256)
377 3mez_B Mannose-specific lectin 29.9 1.4E+02 0.0048 20.7 10.6 58 183-257 26-83 (113)
378 3oky_A Plexin-A2; transmembran 25.4 99 0.0034 29.6 5.6 70 182-254 401-476 (681)
379 3ol2_B Plexin-B1; beta-propell 24.4 1.2E+02 0.004 28.1 5.8 69 182-254 389-462 (528)
380 3s25_A Hypothetical 7-bladed b 22.2 3.4E+02 0.012 22.6 22.5 162 74-259 36-217 (302)
No 1
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.5e-43 Score=319.00 Aligned_cols=308 Identities=19% Similarity=0.235 Sum_probs=247.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
..+..+|++++|+|||++||+|+++++++||+++++.....+.+++..+.+.++++.+++++++ +++|++||..
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~v~iWd~~ 89 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGV------KEVVHIWDDV 89 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSS------TTEEEEEETT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECC------ccEEEEEECC
Confidence 4678899999999999999999999999999999887777666678889999999999888874 7899999999
Q ss_pred CCcEEEEEecCCceEEEEEcCCeEEEEECCeEEEEECCCC-ceeeEEeCCCCCceEEEEeeCCCccEEEEe-CCCCccEE
Q 019349 84 TGTALRELNFLTSILAVRLNKKRLVIVLREKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSLNACFLAVP-ASTTKGSV 161 (342)
Q Consensus 84 ~~~~~~~~~~~~~v~~i~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~g~i 161 (342)
+++++..+.++..|.++.++++.++++.++.|++||+.++ +.+..+.. +.+++++++ .+++++ |. .+|.|
T Consensus 90 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----~~la~~sg~-~~g~v 161 (355)
T 3vu4_A 90 KKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN----GLLVYSNEF-NLGQI 161 (355)
T ss_dssp TTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET----TEEEEEESS-CTTCE
T ss_pred CCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc----cEEEEeCCC-cCcEE
Confidence 9999999999999999999999999999999999999988 77766654 456677765 477776 54 69999
Q ss_pred EEEEccCCc---------------e-eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCce
Q 019349 162 LVYNVMELH---------------S-HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS 225 (342)
Q Consensus 162 ~iwd~~~~~---------------~-~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~ 225 (342)
++||+.+++ + +..+.+|..+|++++|+|+|++||+||.||++|++||+++++.+..+..+.+..
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 999998765 2 678899999999999999999999999999845899999999999997543567
Q ss_pred eEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccccccccccccee------eeccCCC
Q 019349 226 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVL------RNAFPAG 299 (342)
Q Consensus 226 ~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 299 (342)
.|.+++|+||++ +|++++.|++|+|||++.+...+. ..+-..++|..+...|+.....+. ...+++.
T Consensus 242 ~v~~~~~s~~~~---~l~s~s~d~~v~iw~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 314 (355)
T 3vu4_A 242 DVVDMKWSTDGS---KLAVVSDKWTLHVFEIFNDQDNKR----HALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI 314 (355)
T ss_dssp CEEEEEECTTSC---EEEEEETTCEEEEEESSCCSCCCS----EETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred cEEEEEECCCCC---EEEEEECCCEEEEEEccCCCCccc----ccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence 799999999999 999999999999999987643321 111111344444555654332111 1334567
Q ss_pred ccccEEEEEEeCCcEEEEEEecCCCCeeeeEEE
Q 019349 300 VKRASVSVITYNGYFVEYIFSINNCCESTWTLD 332 (342)
Q Consensus 300 ~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~ 332 (342)
++++.|++++.||.+++|++...+..+..|...
T Consensus 315 ~d~~~l~~~~~dg~~~~~~~~~~~~~~~~~~~~ 347 (355)
T 3vu4_A 315 SESSLVVVWPHTRMIETFKVVFDDEMERWLIQM 347 (355)
T ss_dssp SSSEEEEEETTTTEEEEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEEEcCCCCceEEEee
Confidence 777899999999999999998877665545443
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-38 Score=286.53 Aligned_cols=279 Identities=17% Similarity=0.183 Sum_probs=223.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|..+|++++|+||+++|++|+.|+ +++||+.+++.+... +...+..+.+.+++++++..+. |+.|++|
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------d~~v~iw 124 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL-------DNICSIY 124 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET-------TCEEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeC-------CCeEEEE
Confidence 46788999999999999999999887 699999988766554 3456777888888888877664 8999999
Q ss_pred ECCCCc----EEEEEe-cCCceEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 81 NTTTGT----ALRELN-FLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 81 d~~~~~----~~~~~~-~~~~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
|+.+++ ....+. +...|.++.+.++..+++. |++|++||+.+++.+..+..+.. .+.+++++|++.+++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG--DVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCC--ceEEEEECCCCCEEEEE
Confidence 998753 233333 4568999999776554444 88999999999998888865544 57778888888899988
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
+ .||.|++||+++++++..+.+|..+|++++|+|+|++|++|+.||+ |++||+++++.+..+........|.+++|+
T Consensus 203 ~--~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 203 A--CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp E--TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred e--CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence 8 6899999999999999999999999999999999999999999998 589999999888777533333469999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCc
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 313 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 313 (342)
|+++ +|++|+.||+|++||+........ +.+ |...+..+.+.+++..|++++.||.
T Consensus 280 ~~g~---~l~~g~~d~~i~vwd~~~~~~~~~-------~~~--------------h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 280 KSGR---LLLAGYDDFNCNVWDALKADRAGV-------LAG--------------HDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTSS---EEEEEETTSEEEEEETTTCCEEEE-------EEC--------------CSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCC---EEEEECCCCeEEEEEcccCcEeeE-------eec--------------CCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 9999 999999999999999876543221 111 1112223344555588999999999
Q ss_pred EEEEE
Q 019349 314 FVEYI 318 (342)
Q Consensus 314 v~~~~ 318 (342)
|++|+
T Consensus 336 i~iWd 340 (340)
T 1got_B 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99994
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=286.71 Aligned_cols=279 Identities=14% Similarity=0.168 Sum_probs=222.5
Q ss_pred CCCCCCCeEEEEEcCC----CCEEEEEcCCc-EEEEeCCCCcEEE--E--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQD----NSGFALSTKDG-FKIFDSSTGRLCY--E--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d----~~~la~g~~~g-~~v~d~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (342)
.+.|..+|++++|+|+ +.+|++|+.|+ ++||++...+... . .+...+..+.+.++...++..+.
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~------- 100 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL------- 100 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET-------
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC-------
Confidence 3578999999999985 56899998887 6999988775432 2 34456777777777777766654
Q ss_pred CCeEEEEECCCCcEEEEEec-CCceEEEEEcCCeEEEEE---CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccE
Q 019349 74 PRRLCLFNTTTGTALRELNF-LTSILAVRLNKKRLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
|++|++||+.+++++..+.. +..+.+++|+|+...++. ++.|++|++++++....+..+.. .+.+++++|++.+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~--~v~~~~~spdg~~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK--FILSIAYSPDGKY 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS--CEEEEEECTTSSE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc--eEEEEEECCCCCE
Confidence 89999999999999888765 447889999987544443 78999999999988888766543 5777888899999
Q ss_pred EEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEE
Q 019349 150 LAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFS 229 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~ 229 (342)
|++++ .||.|++||+++++.+..+.+|..+|++++|+|++++|++|+.||+ |++||+++++.+..+.. +...|.+
T Consensus 179 lasg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~ 253 (321)
T 3ow8_A 179 LASGA--IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSG--HASWVLN 253 (321)
T ss_dssp EEEEE--TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred EEEEc--CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcC--CCCceEE
Confidence 99988 6899999999999999999999999999999999999999999998 58999999998888754 3556999
Q ss_pred EEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEE
Q 019349 230 LSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT 309 (342)
Q Consensus 230 l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (342)
++|+|+++ +|++++.|++|+|||+++.+..... ..+ ...+..+.+.+++..|++++
T Consensus 254 ~~~sp~~~---~l~s~s~D~~v~iwd~~~~~~~~~~-------~~h--------------~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 254 VAFCPDDT---HFVSSSSDKSVKVWDVGTRTCVHTF-------FDH--------------QDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EEECTTSS---EEEEEETTSCEEEEETTTTEEEEEE-------CCC--------------SSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCC---EEEEEeCCCcEEEEeCCCCEEEEEE-------cCC--------------CCcEEEEEECCCCCEEEEEe
Confidence 99999999 9999999999999999876543211 111 11122233344558999999
Q ss_pred eCCcEEEEEE
Q 019349 310 YNGYFVEYIF 319 (342)
Q Consensus 310 ~dg~v~~~~~ 319 (342)
.||.|++|+.
T Consensus 310 ~d~~i~vwd~ 319 (321)
T 3ow8_A 310 DDQEIHIYDC 319 (321)
T ss_dssp TTCCEEEEEC
T ss_pred CCCeEEEEeC
Confidence 9999999985
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-39 Score=294.92 Aligned_cols=277 Identities=14% Similarity=0.155 Sum_probs=226.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
.|..+|++++|+|++.+|++|+.|+ +++||+.+++..... +...+..+.+.++++.++.++. |++|++||
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~-------D~~i~iwd 178 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA-------DMTIKLWD 178 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET-------TSCCCEEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEe
Confidence 5778999999999999999998887 699999998765443 4567788888888887777664 89999999
Q ss_pred CCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC
Q 019349 82 TTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (342)
Q Consensus 82 ~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (342)
+.+++++..+. +...|.+++|+++. ++.++ |++|++||+.+++.+..+..+.. .+.++.+++++.++++++ .
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~~~~g~~l~s~s--~ 254 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCS--N 254 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSSEEEEEE--T
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc--cEEEEEECCCCCEEEEEc--C
Confidence 99999888775 44589999998864 44444 88999999999999988876544 567778888899999988 6
Q ss_pred ccEEEEEEccCCceeEEEecccCCeeEEEECCC--------------------CCEEEEEeCCCcEEEEEEcCCCeeEEE
Q 019349 158 KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSN--------------------GMYIATASEQGTIIRVFLVSEATKSYS 217 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~d--------------------g~~lat~s~dg~~irlwd~~~~~~~~~ 217 (342)
||+|++||+.++++...+.+|...|.+++|+|+ |.+|++|+.||+ |++||+++++.+..
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCLMT 333 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCceEEE
Confidence 899999999999999999999999999999996 779999999997 58999999999988
Q ss_pred eccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccC
Q 019349 218 FRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFP 297 (342)
Q Consensus 218 ~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (342)
+..+ ...|.+++|+|+++ +|++++.||+|++||++..+.... +..+ ...+..+.
T Consensus 334 ~~~h--~~~v~~v~~~~~g~---~l~s~s~D~~i~vwd~~~~~~~~~-------~~~h--------------~~~v~~l~ 387 (410)
T 1vyh_C 334 LVGH--DNWVRGVLFHSGGK---FILSCADDKTLRVWDYKNKRCMKT-------LNAH--------------EHFVTSLD 387 (410)
T ss_dssp EECC--SSCEEEEEECSSSS---CEEEEETTTEEEEECCTTSCCCEE-------EECC--------------SSCEEEEE
T ss_pred EECC--CCcEEEEEEcCCCC---EEEEEeCCCeEEEEECCCCceEEE-------EcCC--------------CCcEEEEE
Confidence 8643 55699999999999 999999999999999976654321 1111 11122333
Q ss_pred CCccccEEEEEEeCCcEEEEEE
Q 019349 298 AGVKRASVSVITYNGYFVEYIF 319 (342)
Q Consensus 298 ~~~~~~~l~~~~~dg~v~~~~~ 319 (342)
+.++++.|++++.||.|++|++
T Consensus 388 ~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 388 FHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ECSSSSCEEEEETTSEEEEEC-
T ss_pred EcCCCCEEEEEeCCCcEEEEeC
Confidence 4455588999999999999975
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-37 Score=281.55 Aligned_cols=281 Identities=11% Similarity=0.106 Sum_probs=222.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|..+|++++|+||+++|++|+.|+ +++||..+++...... ...+..+.+.+++..++..+. |+++++|
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~-------d~~i~v~ 133 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL-------DNKCSVY 133 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST-------TSEEEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC-------CCCEEEE
Confidence 46888999999999999999999988 5999998887655443 345667788888888776654 8999999
Q ss_pred ECCCCc------EEEEE-ecCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 81 NTTTGT------ALREL-NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 81 d~~~~~------~~~~~-~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
++.... ....+ .+...|.++.|+++. ++.++ |++|++||+++++.+..+..|......+++++++++.++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 986431 22233 355689999998874 44444 889999999999999999877765555566666677889
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEE
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSL 230 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l 230 (342)
++++ .||.|++||+++++++..+.+|..+|++++|+|++++||+|+.||+ ||+||+++++.+..+........+.++
T Consensus 214 ~sgs--~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 214 VSGG--CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEe--CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCcccceeEE
Confidence 9888 6899999999999999999999999999999999999999999998 599999999887776543333458999
Q ss_pred EEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEe
Q 019349 231 SFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITY 310 (342)
Q Consensus 231 ~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (342)
+|+|++. +|++++.|++|++||+.++..... +.++ ...+..+.+.+++.+|++++.
T Consensus 291 ~~s~~g~---~l~~g~~d~~i~vwd~~~~~~~~~-------l~~h--------------~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 291 DFSLSGR---LLFAGYNDYTINVWDVLKGSRVSI-------LFGH--------------ENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp EECTTSS---EEEEEETTSCEEEEETTTCSEEEE-------ECCC--------------SSCEEEEEECTTSSCEEEEET
T ss_pred EEeCCCC---EEEEEECCCcEEEEECCCCceEEE-------EECC--------------CCcEEEEEECCCCCEEEEEcC
Confidence 9999999 999999999999999976653221 1111 111223334455589999999
Q ss_pred CCcEEEEE
Q 019349 311 NGYFVEYI 318 (342)
Q Consensus 311 dg~v~~~~ 318 (342)
||.|++|+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999994
No 6
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.2e-37 Score=280.30 Aligned_cols=285 Identities=12% Similarity=0.117 Sum_probs=216.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEeeC--------------------CEEEEEEcCCCCeEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVG--------------------AFSIVEMLYSSSLLAIV 64 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 64 (342)
.+...|++++|+|||++||+|+++.+++|++.+++.+.....+ .+..+.+.++++.++..
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 3778899999999999999999888999999998776543221 25667777777887776
Q ss_pred cCCCCCCCCCCeEEEEECCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEE
Q 019349 65 GAGEQPSLSPRRLCLFNTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (342)
Q Consensus 65 ~~g~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (342)
+. |++|++||+.+++.+..+. +...|.+++|+++. ++.++ |++|++||+++++....+..+ ..+.+
T Consensus 142 ~~-------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---~~v~~ 211 (393)
T 1erj_A 142 AE-------DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE---DGVTT 211 (393)
T ss_dssp ET-------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEE
T ss_pred cC-------CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC---CCcEE
Confidence 64 8999999999999888776 45589999998764 44444 889999999999887777543 34666
Q ss_pred EeeCC-CccEEEEeCCCCccEEEEEEccCCceeEEE-------ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 019349 141 FSPSL-NACFLAVPASTTKGSVLVYNVMELHSHCEI-------DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 141 ~~~~~-~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~-------~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~ 212 (342)
++.+| ++.++++++ .||.|++||+++++.+..+ .+|...|.+++|+|+|++|++|+.||+ |++||+++.
T Consensus 212 ~~~~~~~~~~l~~~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~ 288 (393)
T 1erj_A 212 VAVSPGDGKYIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNA 288 (393)
T ss_dssp EEECSTTCCEEEEEE--TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC---
T ss_pred EEEECCCCCEEEEEc--CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCC
Confidence 67776 778888887 6899999999998877766 579999999999999999999999997 589999764
Q ss_pred e------------eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccc
Q 019349 213 T------------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESV 280 (342)
Q Consensus 213 ~------------~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (342)
. ....+.. +...|.+++|+|++. +|++++.|++|++||+++++.... +.++.....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~---~l~sgs~D~~v~iwd~~~~~~~~~-------l~~h~~~v~ 356 (393)
T 1erj_A 289 NNKSDSKTPNSGTCEVTYIG--HKDFVLSVATTQNDE---YILSGSKDRGVLFWDKKSGNPLLM-------LQGHRNSVI 356 (393)
T ss_dssp ------------CEEEEEEC--CSSCEEEEEECGGGC---EEEEEETTSEEEEEETTTCCEEEE-------EECCSSCEE
T ss_pred CCcccccCCCCCcceEEEec--ccCcEEEEEECCCCC---EEEEEeCCCeEEEEECCCCeEEEE-------ECCCCCCEE
Confidence 3 2333332 345699999999999 999999999999999987654321 111111111
Q ss_pred cccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 281 NEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
...|.+.. .+.++++.|++++.||.|++|++...
T Consensus 357 ~v~~~~~~--------~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 357 SVAVANGS--------SLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEECSSC--------TTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEEecCCc--------CcCCCCCEEEEECCCCcEEECccccc
Confidence 22233211 22445688999999999999998754
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=278.15 Aligned_cols=278 Identities=9% Similarity=0.054 Sum_probs=201.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCC------------CcE-EEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSST------------GRL-CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSL 72 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 72 (342)
++..|.+++|+|||++|++++++.+|+||... +.. ....+...+..+.+..+ +.++..+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s------- 100 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVAS------- 100 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEE-------
T ss_pred ccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEE-------
Confidence 45679999999999999999987778886211 011 11123356777777665 4455444
Q ss_pred CCCeEEEEECCCCcEEEEE-----ecCCceEEEEEcCCeEEE--EE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeC
Q 019349 73 SPRRLCLFNTTTGTALREL-----NFLTSILAVRLNKKRLVI--VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPS 144 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~~-----~~~~~v~~i~~~~~~~~~--~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (342)
.|++|+|||+.+++.+... .+...|.+++|+++...+ ++ |++|++||+++++.+..+..|.. .+.+++++
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~--~V~~~~~~ 178 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA--QVTCVAAS 178 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEC
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC--ceEEEEec
Confidence 4899999999998765443 345689999999875433 34 88999999999999999877655 46666666
Q ss_pred CCc-cEEEEeCCCCccEEEEEEccCCceeEEEe--cccCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCeeEEEecc
Q 019349 145 LNA-CFLAVPASTTKGSVLVYNVMELHSHCEID--AHQAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRR 220 (342)
Q Consensus 145 ~~~-~~l~~~~~~~~g~i~iwd~~~~~~~~~~~--~h~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~~~~~~~~~~ 220 (342)
+++ .++++++ .||+|++||++++++...+. .|...+++++|+| ++++||+|+.||+ |++||+++++.+.++..
T Consensus 179 ~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 179 PHKDSVFLSCS--EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp SSCTTEEEEEE--TTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEEEEC
T ss_pred CCCCCceeeec--cccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEEEcC
Confidence 665 3667776 68999999999999887764 4667899999999 5678999999997 58999999999988864
Q ss_pred CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCc
Q 019349 221 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGV 300 (342)
Q Consensus 221 ~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (342)
+ ...|++++|+|++. .+||+++.|++|+|||+++++... +.++........|+|.+
T Consensus 256 h--~~~v~~v~fsp~g~--~~lasgs~D~~i~vwd~~~~~~~~--------~~~H~~~V~~v~~sp~~------------ 311 (344)
T 4gqb_B 256 H--SQCVTGLVFSPHSV--PFLASLSEDCSLAVLDSSLSELFR--------SQAHRDFVRDATWSPLN------------ 311 (344)
T ss_dssp C--SSCEEEEEECSSSS--CCEEEEETTSCEEEECTTCCEEEE--------ECCCSSCEEEEEECSSS------------
T ss_pred C--CCCEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCcEEE--------EcCCCCCEEEEEEeCCC------------
Confidence 3 55699999999984 279999999999999987654321 11111111223344433
Q ss_pred ccc-EEEEEEeCCcEEEEEEecC
Q 019349 301 KRA-SVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 301 ~~~-~l~~~~~dg~v~~~~~~~~ 322 (342)
. .|++++.||+|++|+++.+
T Consensus 312 --~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 312 --HSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp --TTEEEEEETTSCEEEEECCC-
T ss_pred --CeEEEEEcCCCeEEEEECCCC
Confidence 4 4567889999999998754
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.7e-36 Score=266.08 Aligned_cols=241 Identities=11% Similarity=0.119 Sum_probs=198.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..+..+|++++|+|++++|++|+.++ +++||+.+++.+.... ...+..+.+.++.+.++..+. |++|++|
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-------d~~i~vw 82 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------DFRIRVF 82 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-------TSEEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC-------CCEEEEE
Confidence 35778999999999999999998887 6999999987765543 456777888888888877764 8999999
Q ss_pred ECCCCcEEEEEec-CCceEEEEEcCCeE--EEEE-CCeEEEEECCCCc-eeeEEeCCCCCceEEEEeeCC-CccEEEEeC
Q 019349 81 NTTTGTALRELNF-LTSILAVRLNKKRL--VIVL-REKTYIYDANTLA-ILDTIDTVPNLKGLCAFSPSL-NACFLAVPA 154 (342)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~~~~~--~~~~-d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 154 (342)
|+.+++++..+.. ...|.+++++|+.. +.++ |++|++||++++. +...+..+. ..+.+++++| ++..+++++
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~--~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--HFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC--SCEEEEEECTTCTTEEEEEE
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC--CcEEEEEECCCCCCEEEEEe
Confidence 9999999988864 55899999998753 3344 8899999998874 445555444 3567777777 567888887
Q ss_pred CCCccEEEEEEccCCceeEEEe-cccCCeeEEEECC--CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 155 STTKGSVLVYNVMELHSHCEID-AHQAPLAAIVLSS--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~~~-~h~~~v~~i~~s~--dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
.||+|++||+.+..+...+. +|...|..+.|+| ++.+|++|+.||+ |++||+++++++..+..+ ...|.+++
T Consensus 161 --~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~h--~~~v~~~~ 235 (304)
T 2ynn_A 161 --LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEGH--MSNVSFAV 235 (304)
T ss_dssp --TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEECC--SSCEEEEE
T ss_pred --CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCCC--CCCEEEEE
Confidence 68999999998887766654 5678899999987 7889999999997 599999999999988643 45699999
Q ss_pred EecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
|+|++. +|++++.||+|++||+++.+.
T Consensus 236 ~~p~~~---~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 236 FHPTLP---IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp ECSSSS---EEEEEETTSCEEEEETTTCCE
T ss_pred ECCCCC---EEEEEcCCCeEEEEECCCCce
Confidence 999999 999999999999999987654
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.9e-36 Score=267.12 Aligned_cols=286 Identities=11% Similarity=0.126 Sum_probs=214.8
Q ss_pred CCCCCCCeEEEEEcCCC-CEEEEEcCCc-EEEEeCCCCc-----EE--EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQDN-SGFALSTKDG-FKIFDSSTGR-----LC--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~-~~la~g~~~g-~~v~d~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (342)
...|.++|++++|+|++ ++|++|+.|+ +++|++.... .+ +..|.+.+..+.+.+++++++.++.
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~------- 85 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW------- 85 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET-------
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC-------
Confidence 35789999999999966 7899998887 6999986421 12 3345567888888888888877764
Q ss_pred CCeEEEEECCCCcEEEEEe-cCCceEEEEEcCCeEE--EEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCC----
Q 019349 74 PRRLCLFNTTTGTALRELN-FLTSILAVRLNKKRLV--IVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL---- 145 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~~~--~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---- 145 (342)
|++|++||+.+++++..+. +...|.+++++++... .++ |++|++||++. +.+..+..+.. .+.++...|
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~--~v~~~~~~~~~~~ 162 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHND--WVSQVRVVPNEKA 162 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSS--CEEEEEECCC---
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCC--cEEEEEEccCCCC
Confidence 8999999999999988876 4568999999887533 333 88999999974 45566655544 344455544
Q ss_pred --CccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC
Q 019349 146 --NACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 146 --~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
++..+++++ .|+.|++||+++.+....+.+|..+|++++|+|+|++|++|+.||+ |++||+.+++.+..+..
T Consensus 163 ~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~--- 236 (319)
T 3frx_A 163 DDDSVTIISAG--NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSA--- 236 (319)
T ss_dssp ---CCEEEEEE--TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---
T ss_pred CCCccEEEEEe--CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecC---
Confidence 344777777 6899999999999999999999999999999999999999999997 58999999999888853
Q ss_pred ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCc-cccccccccccccccccccccceeeeccCCCccc
Q 019349 224 PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRT-SSILGSILPESVNEVLDPADHHVLRNAFPAGVKR 302 (342)
Q Consensus 224 ~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (342)
...|.+++|+|++. +|++++.+ .+++|+++........... ..+.... ...+..+++.|++
T Consensus 237 ~~~v~~~~~sp~~~---~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~~~~spdg 298 (319)
T 3frx_A 237 QDEVFSLAFSPNRY---WLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAA--------------EPHAVSLAWSADG 298 (319)
T ss_dssp CSCEEEEEECSSSS---EEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGG--------------CCCEEEEEECTTS
T ss_pred CCcEEEEEEcCCCC---EEEEEcCC-CcEEEEeCcCeeeeccCccccccccCc--------------CcceeEEEECCCC
Confidence 34699999999998 88877754 5999998765432110000 0000001 1111233445556
Q ss_pred cEEEEEEeCCcEEEEEEecC
Q 019349 303 ASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 303 ~~l~~~~~dg~v~~~~~~~~ 322 (342)
.+|++++.||.|++|++...
T Consensus 299 ~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 299 QTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SEEEEEETTSCEEEEEEEEC
T ss_pred CEEEEeecCceEEEEEEeec
Confidence 89999999999999998753
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.9e-37 Score=278.79 Aligned_cols=288 Identities=15% Similarity=0.180 Sum_probs=215.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|..+|++++|+|++++|++|+.|+ ++|||+.+++..... +...+..+.+.++++.++.++ .|+.+++|
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~-------~d~~v~iw 135 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGG-------LDSACSIF 135 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECC-------SSSCCEEE
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEee-------CCCcEEEE
Confidence 46889999999999999999999887 699999998766544 345566677878877776655 48999999
Q ss_pred ECCCCcE-------EEEE-ecCCceEEEEEcCC---eEEEEE-CCeEEEEECCCCceeeEEeC---CCCCceEEEEeeCC
Q 019349 81 NTTTGTA-------LREL-NFLTSILAVRLNKK---RLVIVL-REKTYIYDANTLAILDTIDT---VPNLKGLCAFSPSL 145 (342)
Q Consensus 81 d~~~~~~-------~~~~-~~~~~v~~i~~~~~---~~~~~~-d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~ 145 (342)
|+.+... ...+ .+...|.++.+.++ .++.++ |++|++||+.+++.+..+.. ..+...+.++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 9865321 1122 23446788888764 355555 88999999999988877632 12334566777655
Q ss_pred -CccEEEEeCCCCccEEEEEEcc-CCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC
Q 019349 146 -NACFLAVPASTTKGSVLVYNVM-ELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 146 -~~~~l~~~~~~~~g~i~iwd~~-~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
++.++++++ .||+|++||++ ..+.+..+.+|..+|++++|+|+|++|+|||.||+ ||+||+++++.+..+.....
T Consensus 216 ~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 216 LNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp SSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEECCCCS
T ss_pred CCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEeccccc
Confidence 667888887 68999999998 45778889999999999999999999999999998 58999999998887754321
Q ss_pred -----ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCC
Q 019349 224 -----PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPA 298 (342)
Q Consensus 224 -----~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (342)
...|.+++|+|+++ +|++|+.||+|++||+...+.... +..... .|...+..+.+
T Consensus 293 ~~~~~~~~v~~~~~s~~g~---~l~~g~~dg~i~vwd~~~~~~~~~-------~~~~~~----------~h~~~v~~l~~ 352 (380)
T 3iz6_a 293 RNDNELPIVTSVAFSISGR---LLFAGYSNGDCYVWDTLLAEMVLN-------LGTLQN----------SHEGRISCLGL 352 (380)
T ss_dssp SSCCSSCSCSEEEECSSSS---EEEEECTTSCEEEEETTTCCEEEE-------ECCSCS----------SCCCCCCEEEE
T ss_pred ccccccCceEEEEECCCCC---EEEEEECCCCEEEEECCCCceEEE-------EecccC----------CCCCceEEEEE
Confidence 12388999999999 999999999999999876543221 000000 11111223334
Q ss_pred CccccEEEEEEeCCcEEEEEEec
Q 019349 299 GVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 299 ~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
.+++..|++++.||.|++|++..
T Consensus 353 s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 353 SSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCCCEEEEeeCCCCEEEEecCC
Confidence 45558999999999999998753
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=265.96 Aligned_cols=292 Identities=12% Similarity=0.177 Sum_probs=212.6
Q ss_pred CCCCC-CeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEE-----EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCe
Q 019349 4 QSSSY-PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE-----RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 4 ~~~~~-~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (342)
+.|.. +|.+++|+|+|++||+|+.|+ ++|||+.+++.... .+...+..+.+.+++++++.++. |++
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-------D~~ 84 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-------DAT 84 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-------TSC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-------CCc
Confidence 34555 899999999999999998887 69999988754321 24467888888888888887764 899
Q ss_pred EEEEECCCCc--EEEEEe-cCCceEEEEEcCCeE--EEEE-CCeEEEEECCCCce---eeEEeCCCCCceEEEEeeCCCc
Q 019349 77 LCLFNTTTGT--ALRELN-FLTSILAVRLNKKRL--VIVL-REKTYIYDANTLAI---LDTIDTVPNLKGLCAFSPSLNA 147 (342)
Q Consensus 77 i~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~~~--~~~~-d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 147 (342)
+++||..++. ++..+. +...|.+++|+++.. +.++ |++|++||+.++.. +..+..+ ...+.+++++|++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH--TQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC--CSCEEEEEECSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc--CCCeEEEEECCCC
Confidence 9999988764 445554 455899999998753 3344 88999999987643 3444433 3457778888888
Q ss_pred cEEEEeCCCCccEEEEEEccCCc--eeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC-------------
Q 019349 148 CFLAVPASTTKGSVLVYNVMELH--SHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA------------- 212 (342)
Q Consensus 148 ~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~------------- 212 (342)
.+|++++ .|+.|++||+.+++ +..++.+|..+|++++|+|+|++||+|+.||+ |++||....
T Consensus 163 ~~l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 163 ELLASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SCEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---C
T ss_pred CEEEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCC
Confidence 8999888 68999999998875 45778899999999999999999999999998 589997322
Q ss_pred --eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccc
Q 019349 213 --TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHH 290 (342)
Q Consensus 213 --~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
+.+..+. +.+...|++++|+|++. +|++++.|++|++|+++.......... ...... ...|.
T Consensus 240 ~~~~~~~~~-~~h~~~v~~v~~~~~~~---~l~s~~~d~~i~vw~~~~~~~~~~~~~--~~~~~~----------~~~h~ 303 (345)
T 3fm0_A 240 SWKCICTLS-GFHSRTIYDIAWCQLTG---ALATACGDDAIRVFQEDPNSDPQQPTF--SLTAHL----------HQAHS 303 (345)
T ss_dssp EEEEEEEEC-SSCSSCEEEEEECTTTC---CEEEEETTSCEEEEEECTTSCTTSCCE--EEEEEE----------TTSSS
T ss_pred ccceeEEec-CCCCCcEEEEEEecCCC---EEEEEeCCCeEEEEEeCCCCCcceeeE--EEEeee----------ccccc
Confidence 2233332 22455699999999998 999999999999999876543221100 000000 01111
Q ss_pred eeeeccCCCccc-cEEEEEEeCCcEEEEEEecCC
Q 019349 291 VLRNAFPAGVKR-ASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 291 ~~~~~~~~~~~~-~~l~~~~~dg~v~~~~~~~~~ 323 (342)
..+..+++.|++ ..|++++.||.|++|++...+
T Consensus 304 ~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 304 QDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred CcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 222333344443 479999999999999987644
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.3e-35 Score=263.51 Aligned_cols=292 Identities=13% Similarity=0.147 Sum_probs=208.0
Q ss_pred CCCCCCeEEEEE-----cC-CCCEEEEEcCCc-EEEEeCCCCc-------EE--EEEeeCCEEEEEEcCCCCeEEEEcCC
Q 019349 4 QSSSYPVFFVSF-----NQ-DNSGFALSTKDG-FKIFDSSTGR-------LC--YERAVGAFSIVEMLYSSSLLAIVGAG 67 (342)
Q Consensus 4 ~~~~~~V~~l~f-----s~-d~~~la~g~~~g-~~v~d~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~g 67 (342)
+.|..+|++++| ++ |+++|++|+.|+ +++||+.+.+ .. +..|...+..+.+.++..+++.++.
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~- 96 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW- 96 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET-
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC-
Confidence 468899999999 76 999999998887 6999986532 22 2234466777888877777776654
Q ss_pred CCCCCCCCeEEEEECCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEee
Q 019349 68 EQPSLSPRRLCLFNTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (342)
Q Consensus 68 ~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (342)
|++|++||+++++.+..+. +...|.+++|+++. ++.++ |++|++||+.............+...+.++.+
T Consensus 97 ------D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 97 ------DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp ------TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred ------CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 8999999999999988876 45689999999874 44444 88999999974332221111233445666777
Q ss_pred CCCc----------cEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC-C
Q 019349 144 SLNA----------CFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE-A 212 (342)
Q Consensus 144 ~~~~----------~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~-~ 212 (342)
+|++ .++++++ .||.|++|| .+.+....+.+|..+|++++|+|+|++||+|+.||+ |++||+.+ +
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~~~ 246 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVG--WDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILNLT 246 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEE--TTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSCCS
T ss_pred ccccccccccCCCCCEEEEEc--CCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCCCc
Confidence 6654 6788887 689999999 456677788999999999999999999999999997 58999943 4
Q ss_pred eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccccccccccccee
Q 019349 213 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVL 292 (342)
Q Consensus 213 ~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
.....+.. ...|.+++|+|++. +|+ ++.|+.|++||+.+....... .+.+......-...++...
T Consensus 247 ~~~~~~~~---~~~v~~v~~sp~~~---~la-~~~d~~v~iw~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 311 (343)
T 2xzm_R 247 YPQREFDA---GSTINQIAFNPKLQ---WVA-VGTDQGVKIFNLMTQSKAPVC--------TIEAEPITKAEGQKGKNPQ 311 (343)
T ss_dssp SCSEEEEC---SSCEEEEEECSSSC---EEE-EEESSCEEEEESSSCCSCSEE--------ECCCCSGGGBTTBCCSCCC
T ss_pred ccceeecC---CCcEEEEEECCCCC---EEE-EECCCCEEEEEeCCCCCCceE--------EeecCcchhhhhhcCCCCc
Confidence 44444422 23599999999998 665 556888999999876542200 0000000000001112222
Q ss_pred eeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 293 RNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
+..+++.++++.|++++.||.|++|++..
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 33444555668999999999999999864
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-34 Score=257.29 Aligned_cols=281 Identities=15% Similarity=0.169 Sum_probs=217.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|..+|++++|+|++++|++|+.++ +++|++.+++..... +...+..+.+.++++.++.++. |+.|++|
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------d~~i~vw 92 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD-------DKTLKIW 92 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC-------CCEEEEE
Confidence 46788999999999999999998887 699999988766544 4456777888888888877764 8999999
Q ss_pred ECCCCcEEEEEec-CCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 81 NTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
|+.+++++..+.. ...|.++.++++. ++.++ |+.|++||+++++.+..+..+.. .+.++++++++.++++++
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-- 168 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--PVSAVHFNRDGSLIVSSS-- 168 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEE--
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC--cEEEEEEcCCCCEEEEEe--
Confidence 9999999888864 4589999998874 33334 88999999999998888866544 467777788888999888
Q ss_pred CccEEEEEEccCCceeEEEe-cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe-c
Q 019349 157 TKGSVLVYNVMELHSHCEID-AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG-Q 234 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~~~~-~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs-~ 234 (342)
.||.|++||+++++.+..+. .|..++.+++|+|++++|++++.||. |++||+++++.+..+..+..........|+ +
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 68999999999998877664 56778999999999999999999997 589999999988888654322222223444 5
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEE--eCC
Q 019349 235 SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT--YNG 312 (342)
Q Consensus 235 d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg 312 (342)
++. +|++++.||+|++||++..+.... +.++........|+ +..+.|++++ .||
T Consensus 248 ~~~---~l~sg~~dg~i~vwd~~~~~~~~~-------~~~h~~~v~~~~~~--------------p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 248 GGK---WIVSGSEDNLVYIWNLQTKEIVQK-------LQGHTDVVISTACH--------------PTENIIASAALENDK 303 (312)
T ss_dssp SSC---EEEECCTTSCEEEEETTTCCEEEE-------ECCCSSCEEEEEEC--------------SSSSEEEEEECTTTC
T ss_pred CCc---EEEEECCCCEEEEEECCCchhhhh-------hhccCCcEEEEeec--------------CcCCceEEEEccCCc
Confidence 677 999999999999999987654321 11111111122344 4447888887 599
Q ss_pred cEEEEEEe
Q 019349 313 YFVEYIFS 320 (342)
Q Consensus 313 ~v~~~~~~ 320 (342)
.|++|+.+
T Consensus 304 ~i~~W~~d 311 (312)
T 4ery_A 304 TIKLWKSD 311 (312)
T ss_dssp CEEEEECC
T ss_pred cEEEecCC
Confidence 99999864
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=266.35 Aligned_cols=238 Identities=9% Similarity=0.062 Sum_probs=188.3
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEE------EEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 7 SYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCY------ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
+.+|++++|+||+. |++|+.++ ++|||+++++.+. ..|.+.+..+.+.++++.++..+. |++|++
T Consensus 82 ~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~-------d~~i~i 153 (344)
T 4gqb_B 82 EAGVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK-------DICIKV 153 (344)
T ss_dssp SSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET-------TSCEEE
T ss_pred CCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC-------CCeEEE
Confidence 46799999999965 66676666 6999998875322 124467888888888888877764 899999
Q ss_pred EECCCCcEEEEEe-cCCceEEEEEcCCe--E-EEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCC-ccEEEEe
Q 019349 80 FNTTTGTALRELN-FLTSILAVRLNKKR--L-VIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLN-ACFLAVP 153 (342)
Q Consensus 80 wd~~~~~~~~~~~-~~~~v~~i~~~~~~--~-~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 153 (342)
||+.+++++..+. +...|.+++|+++. + +.++ |++|++||+++++....+....+...+.+++++|+ +.+++++
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 9999999998886 45689999998763 3 3444 88999999999988887765555455677777774 4567776
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCC-CEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNG-MYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 232 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg-~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~f 232 (342)
+ .||+|++||+++++++.++.+|..+|++|+|+|+| ++||+||.||+ |+|||+.+++.+. +.. |...|++|+|
T Consensus 234 ~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~~-~~~--H~~~V~~v~~ 307 (344)
T 4gqb_B 234 D--ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELFR-SQA--HRDFVRDATW 307 (344)
T ss_dssp E--TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEEE-ECC--CSSCEEEEEE
T ss_pred c--cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEEE-EcC--CCCCEEEEEE
Confidence 6 68999999999999999999999999999999998 57999999998 5899999987653 432 4567999999
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 233 GQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 233 s~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+|+++ .+|++++.|++|++|++....
T Consensus 308 sp~~~--~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 308 SPLNH--SLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CSSST--TEEEEEETTSCEEEEECCC--
T ss_pred eCCCC--eEEEEEcCCCeEEEEECCCCC
Confidence 99986 278899999999999998654
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.4e-36 Score=271.06 Aligned_cols=281 Identities=10% Similarity=0.128 Sum_probs=198.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC------Cc-EEEEeCCCCcE------EEEEeeCCEEEEEEcCCCCeEEEEcCCCCCC
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTK------DG-FKIFDSSTGRL------CYERAVGAFSIVEMLYSSSLLAIVGAGEQPS 71 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~------~g-~~v~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 71 (342)
.++..|++++|||||++||+|++ ++ +++|+..++.. ....+...+..+.+.++.. +++++
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s------ 112 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVAS------ 112 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEE------
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEE------
Confidence 36778999999999999999987 44 58888766532 1223445677777776654 33443
Q ss_pred CCCCeEEEEECCCCcEEEE-----EecCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEee
Q 019349 72 LSPRRLCLFNTTTGTALRE-----LNFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~~~~~-----~~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (342)
.|++|+|||+.+++.... ..+...|.+++|+++. ++.++ |+.|++||+++++.+..+..+.. .+.++++
T Consensus 113 -~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~--~v~~v~~ 189 (357)
T 4g56_B 113 -DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS--EVNCVAA 189 (357)
T ss_dssp -TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEE
T ss_pred -CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC--CEEEEEE
Confidence 389999999988875432 2345689999999875 33344 88999999999999988876655 4555666
Q ss_pred CCCcc-EEEEeCCCCccEEEEEEccCCceeEEEe--cccCCeeEEEECCC-CCEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 144 SLNAC-FLAVPASTTKGSVLVYNVMELHSHCEID--AHQAPLAAIVLSSN-GMYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 144 ~~~~~-~l~~~~~~~~g~i~iwd~~~~~~~~~~~--~h~~~v~~i~~s~d-g~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
++++. ++++++ .||.|++||++++++...+. .|...+++++|+|+ +.+||+|+.|++ |++||+++++.+..+.
T Consensus 190 s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 190 CPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQTSA 266 (357)
T ss_dssp CTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEEEC
T ss_pred ccCCCceeeeec--cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEEEe
Confidence 55543 566666 58999999999988766543 57788999999997 578999999998 5899999999888885
Q ss_pred cCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCC
Q 019349 220 RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAG 299 (342)
Q Consensus 220 ~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (342)
.+ ...|++++|+|++. .+||+++.|++|+|||+++.+..... ++........|+|.
T Consensus 267 ~~--~~~v~~l~~sp~~~--~~lasgs~D~~i~iwd~~~~~~~~~~--------~H~~~V~~vafsP~------------ 322 (357)
T 4g56_B 267 VH--SQNITGLAYSYHSS--PFLASISEDCTVAVLDADFSEVFRDL--------SHRDFVTGVAWSPL------------ 322 (357)
T ss_dssp CC--SSCEEEEEECSSSS--CCEEEEETTSCEEEECTTSCEEEEEC--------CCSSCEEEEEECSS------------
T ss_pred cc--ceeEEEEEEcCCCC--CEEEEEeCCCEEEEEECCCCcEeEEC--------CCCCCEEEEEEeCC------------
Confidence 43 45699999999974 28999999999999999876532210 11111112234442
Q ss_pred ccccEEEEEEeCCcEEEEEEecCC
Q 019349 300 VKRASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 300 ~~~~~l~~~~~dg~v~~~~~~~~~ 323 (342)
++..|++++.||.|++|++..+.
T Consensus 323 -d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 323 -DHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp -STTEEEEEETTSCEEEEECC---
T ss_pred -CCCEEEEEcCCCeEEEEECCCCC
Confidence 34789999999999999986543
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-34 Score=280.20 Aligned_cols=245 Identities=18% Similarity=0.235 Sum_probs=196.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc--EE--EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR--LC--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
+.|...|++++|+|||++||+|+.|+ ++|||+.+++ +. +..+.+.+..+.+.++++.++.++.+.. ..++|+
T Consensus 56 ~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~---~~~~v~ 132 (611)
T 1nr0_A 56 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE---RFGHVF 132 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS---CSEEEE
T ss_pred cCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC---ceeEEE
Confidence 46788999999999999999999887 6999987543 22 3334577888899999888888775310 124788
Q ss_pred EEECCCCcEEEEEe-cCCceEEEEEcCCe---EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 79 LFNTTTGTALRELN-FLTSILAVRLNKKR---LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 79 iwd~~~~~~~~~~~-~~~~v~~i~~~~~~---~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
+||. ++.+..+. +...|.+++|+|+. ++.++ |++|++||..+++.+..+..|.. .+.+++++|++.+||++
T Consensus 133 ~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~--~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 133 LFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK--FVHSVRYNPDGSLFAST 208 (611)
T ss_dssp ETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS--CEEEEEECTTSSEEEEE
T ss_pred EeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC--ceEEEEECCCCCEEEEE
Confidence 8874 44444444 34589999999874 44444 88999999998888888765544 57788888899999998
Q ss_pred CCCCccEEEEEEccCCceeEEEe-------cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-----
Q 019349 154 ASTTKGSVLVYNVMELHSHCEID-------AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG----- 221 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~-------~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~----- 221 (342)
+ .||+|++||+.+++++..+. +|..+|.+++|+|||++|+|++.|++ ||+||+.+++.+.++..+
T Consensus 209 s--~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 209 G--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp E--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECCSSGGG
T ss_pred E--CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeecCCCCccc
Confidence 8 68999999999999888874 79999999999999999999999997 599999998876654311
Q ss_pred ------------------------------------cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 222 ------------------------------------TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 222 ------------------------------------~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.+...|.+++|+||++ +|++++.|++|++||+.++..
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~---~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK---TLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS---EEEEEETTSCEEEEETTTCCE
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC---EEEEEeCCCcEEEEECCCCce
Confidence 2344699999999999 999999999999999987643
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=256.66 Aligned_cols=237 Identities=14% Similarity=0.190 Sum_probs=202.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..+...|.+++|++++.++++|+.|+ +++||+.+++.+..... ..+..+.+.++++.++..+. +++|++|
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~-------dg~v~i~ 149 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH-------VGKVNIF 149 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT-------TSEEEEE
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC-------CCcEEEE
Confidence 46788999999999999999998887 69999999987765544 34455777777888776654 8999999
Q ss_pred ECCCCcEEEEEecC-CceEEEEEcCCeEEE--EE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 81 NTTTGTALRELNFL-TSILAVRLNKKRLVI--VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 81 d~~~~~~~~~~~~~-~~v~~i~~~~~~~~~--~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
|+.+++....+... ..|.+++++++...+ ++ |+.|++||+.+++.+..+..+.. .+.+++++|++.+|++++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~spd~~~l~s~s-- 225 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQLLVTAS-- 225 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CCCEEEECTTSCEEEEEC--
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC--ceeEEEEcCCCCEEEEEc--
Confidence 99999988877654 479999999875433 33 88999999999999988876554 456677778888999988
Q ss_pred CccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCC
Q 019349 157 TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSM 236 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~ 236 (342)
.||.|++||+++++....+.+|...|.+++|+|+|++|++|+.||+ |++||+.+++++.++..+ ...|.+++|+|++
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~h--~~~v~~v~~s~~g 302 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFDH--QDQVWGVKYNGNG 302 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCC--SSCEEEEEECTTS
T ss_pred CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEcCC--CCcEEEEEECCCC
Confidence 6899999999999999999999999999999999999999999998 589999999999988643 5579999999999
Q ss_pred CcccEEEEEeCCCcEEEEecC
Q 019349 237 QFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 237 ~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+ +|++++.||+|+|||+.
T Consensus 303 ~---~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 S---KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp S---EEEEEETTCCEEEEECC
T ss_pred C---EEEEEeCCCeEEEEeCC
Confidence 9 99999999999999963
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-34 Score=256.28 Aligned_cols=283 Identities=13% Similarity=0.125 Sum_probs=225.7
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
...|..+|++++|+|++++|++|+.++ +++||+.+++.+... +...+..+.+.++++.+++++. |++|++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------dg~i~i 100 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-------DYSIKL 100 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TTEEEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC-------CCeEEE
Confidence 356889999999999999999998877 799999998876655 3466777888887888877764 899999
Q ss_pred EECCCCcEEEEEecCCceEEEEEcCCeEEE--EE-C-----CeEEEEECCCCc-----------eeeEEeCCCCCceEEE
Q 019349 80 FNTTTGTALRELNFLTSILAVRLNKKRLVI--VL-R-----EKTYIYDANTLA-----------ILDTIDTVPNLKGLCA 140 (342)
Q Consensus 80 wd~~~~~~~~~~~~~~~v~~i~~~~~~~~~--~~-d-----~~i~i~d~~~~~-----------~~~~~~~~~~~~~~~~ 140 (342)
||+.+++.+..+.+...+.++.|+++...+ +. + +.|++||+.... .+..+..+.....+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999999999988899999998875333 33 5 799999997653 2333334444346788
Q ss_pred EeeCCCccEEEEeCCCCccEEEEEEccC-CceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 141 FSPSLNACFLAVPASTTKGSVLVYNVME-LHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~~~g~i~iwd~~~-~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
+++++++.++++++ .+|.|++||+.+ .+.+..+..|..+|.+++|+|++++|++++.||. |++||+++++.+..+.
T Consensus 181 ~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGH--KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEECGGGCEEEEEE--TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EEEcCCCCEEEEEc--CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeeec
Confidence 88888898999887 689999999998 7888899999999999999999999999999997 5899999999888875
Q ss_pred cCcCceeEEEEEEecCCCcccEEEEEeCCC--------------cEEEEecCCCCCCCCCCCcccccccccccccccccc
Q 019349 220 RGTYPSTIFSLSFGQSMQFQDILVATSSSG--------------SLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLD 285 (342)
Q Consensus 220 ~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
....+.+++|+|+++ ++++++.++ .+++||+...+.... +..+........|+
T Consensus 258 ---~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-------~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 258 ---TDCPLNTAVITPLKE---FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR-------VQGHFGPLNTVAIS 324 (369)
T ss_dssp ---CSSCEEEEEECSSSS---EEEEEECCC-------------CEEEEEETTTCCEEEE-------EECCSSCEEEEEEC
T ss_pred ---CCCCceeEEecCCCc---eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh-------eecccCcEEEEEEC
Confidence 345699999999999 999999998 899999876654221 11111111122344
Q ss_pred ccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 286 PADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
++++.|++++.||.|++|+++..
T Consensus 325 --------------~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 325 --------------PQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp --------------TTSSEEEEEETTSEEEEEEECHH
T ss_pred --------------CCCCEEEEEcCCCeEEEEECccc
Confidence 44489999999999999998753
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2e-34 Score=257.40 Aligned_cols=290 Identities=12% Similarity=0.094 Sum_probs=213.7
Q ss_pred CCCCCCCeEEEEEcCC-CCEEEEEcCCc-EEEEeCCCCcE-----E--EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQD-NSGFALSTKDG-FKIFDSSTGRL-----C--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d-~~~la~g~~~g-~~v~d~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (342)
...|.+.|++|+|+|+ +++|++|+.|+ ++|||+.+.+. . +..+...+..+.+.+++++++..+.
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~------- 106 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW------- 106 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET-------
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc-------
Confidence 4579999999999998 57999998887 79999876531 1 2234567888888888888877664
Q ss_pred CCeEEEEECCCCcEEEEEecC-CceEEEEEcCC--eEEEEE-CCeEEEEECCCCceeeE-EeCCCCCceEEEEeeCCCcc
Q 019349 74 PRRLCLFNTTTGTALRELNFL-TSILAVRLNKK--RLVIVL-REKTYIYDANTLAILDT-IDTVPNLKGLCAFSPSLNAC 148 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~-~~v~~i~~~~~--~~~~~~-d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 148 (342)
|+.|++|+...+......... ..+..+.+.++ .++.++ |+.+++||+........ ...+.......++++.+...
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 899999999988877766544 46666777654 344444 88999999977644322 22333444455566666666
Q ss_pred EEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEE
Q 019349 149 FLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIF 228 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~ 228 (342)
++++++ .|+.|++||+++++.+..+.+|..+|++|+|+|+|++|++|+.||+ |++||+++++.+..+.. ...+.
T Consensus 187 ~~~s~~--~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~---~~~v~ 260 (340)
T 4aow_A 187 IIVSCG--WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDG---GDIIN 260 (340)
T ss_dssp EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---SSCEE
T ss_pred EEEEEc--CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecC---CceEE
Confidence 777777 5899999999999999999999999999999999999999999998 58999999999888753 34599
Q ss_pred EEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEE
Q 019349 229 SLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVI 308 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (342)
+++|+|++. +++++.|++|++||++............. ......+...+..+.+.+++++|+++
T Consensus 261 ~~~~~~~~~----~~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 261 ALCFSPNRY----WLCAATGPSIKIWDLEGKIIVDELKQEVI------------STSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp EEEECSSSS----EEEEEETTEEEEEETTTTEEEEEECCC-------------------CCCCCEEEEEECTTSSEEEEE
T ss_pred eeecCCCCc----eeeccCCCEEEEEECCCCeEEEeccccce------------eeeccCCCCCEEEEEECCCCCEEEEE
Confidence 999999986 66777899999999986543221000000 00001112223334445566899999
Q ss_pred EeCCcEEEEEEec
Q 019349 309 TYNGYFVEYIFSI 321 (342)
Q Consensus 309 ~~dg~v~~~~~~~ 321 (342)
+.||.|++|++..
T Consensus 325 s~Dg~v~iW~~~t 337 (340)
T 4aow_A 325 YTDNLVRVWQVTI 337 (340)
T ss_dssp ETTSCEEEEEEEC
T ss_pred eCCCEEEEEeCCC
Confidence 9999999999875
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-34 Score=262.26 Aligned_cols=241 Identities=9% Similarity=0.061 Sum_probs=189.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEE----EE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLC----YE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
.+...|++++|+|++.+|+++.++.++|||+.+++.. +. .+...+..+.+.++++.++.++. |++|+
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~-------dg~v~ 164 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK-------DFSVK 164 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-------TSCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-------CCeEE
Confidence 3567899999999998777766666899999887532 12 23467888888888888877664 89999
Q ss_pred EEECCCCcEEEEEec-CCceEEEEEcCCe---EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCc-cEEEE
Q 019349 79 LFNTTTGTALRELNF-LTSILAVRLNKKR---LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA-CFLAV 152 (342)
Q Consensus 79 iwd~~~~~~~~~~~~-~~~v~~i~~~~~~---~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 152 (342)
+||+.+++++..+.. ...|.+++|+++. ++.+. |++|++||+++++....+....+...+.+++++|++ .++++
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 999999999988864 4589999997653 34444 889999999998877776655555667788888764 56777
Q ss_pred eCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCC-CEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 153 PASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNG-MYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 153 ~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg-~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
++ .|+.|++||+++++++..+.+|..+|++++|+|++ ++||+||.||+ |+|||+++++.+..+ .+...|++|+
T Consensus 245 g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~---~H~~~V~~va 318 (357)
T 4g56_B 245 GD--ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDL---SHRDFVTGVA 318 (357)
T ss_dssp EE--SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEEC---CCSSCEEEEE
T ss_pred ee--cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEEC---CCCCCEEEEE
Confidence 66 68999999999999999999999999999999987 67999999998 589999999887655 2456799999
Q ss_pred Eec-CCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 232 FGQ-SMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 232 fs~-d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
|+| |+. +|++++.||+|++|++....+
T Consensus 319 fsP~d~~---~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 319 WSPLDHS---KFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECSSSTT---EEEEEETTSCEEEEECC----
T ss_pred EeCCCCC---EEEEEcCCCeEEEEECCCCCc
Confidence 998 787 999999999999999976543
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.2e-34 Score=277.27 Aligned_cols=299 Identities=10% Similarity=0.124 Sum_probs=224.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEE--EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLC--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
..+.+.+++|+|||++|++++++.+++|++.+++.. +..|...+..+.+.+++++++..+. |++|+|||+.
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~-------d~~v~lWd~~ 89 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV-------HGNVRIWDTT 89 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEESS
T ss_pred ccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeC-------CCCEEEeECC
Confidence 456788999999999999999888899999877544 4445677888899888888887765 8999999997
Q ss_pred CCcE--EEEEe-cCCceEEEEEcCCeEEEE--EC-----CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCcc-EEEE
Q 019349 84 TGTA--LRELN-FLTSILAVRLNKKRLVIV--LR-----EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNAC-FLAV 152 (342)
Q Consensus 84 ~~~~--~~~~~-~~~~v~~i~~~~~~~~~~--~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 152 (342)
+++. ...+. +...|.+++|+++...++ ++ +.|++||. ++....+..|. ..+.+++++|++. .|++
T Consensus 90 ~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~--~~v~~v~f~p~~~~~l~s 165 (611)
T 1nr0_A 90 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQA--RAMNSVDFKPSRPFRIIS 165 (611)
T ss_dssp STTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCS--SCEEEEEECSSSSCEEEE
T ss_pred CCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCC--CCceEEEECCCCCeEEEE
Confidence 6543 33443 456999999999864443 32 26777774 45555555443 4577777788775 5777
Q ss_pred eCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-----cCceeE
Q 019349 153 PASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-----TYPSTI 227 (342)
Q Consensus 153 ~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-----~~~~~v 227 (342)
++ .|++|++||..+++...++.+|...|++++|+|||++||+|+.|++ |++||+.+++.+..+... .+...|
T Consensus 166 ~s--~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~-i~lwd~~~g~~~~~~~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 166 GS--DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT-IVLYNGVDGTKTGVFEDDSLKNVAHSGSV 242 (611)
T ss_dssp EE--TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEEECBCTTSSSCSSSSCE
T ss_pred Ee--CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc-EEEEECCCCcEeeeeccccccccccCCCE
Confidence 77 6899999999999999999999999999999999999999999998 589999999988877421 245679
Q ss_pred EEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccc-------------ccccccccccccccccc-------
Q 019349 228 FSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSS-------------ILGSILPESVNEVLDPA------- 287 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~------- 287 (342)
.+++|+||++ +|++++.|++|++||+++.+.......... .+.....+....+|++.
T Consensus 243 ~~v~~spdg~---~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~ 319 (611)
T 1nr0_A 243 FGLTWSPDGT---KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQV 319 (611)
T ss_dssp EEEEECTTSS---EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEE
T ss_pred EEEEECCCCC---EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceE
Confidence 9999999999 999999999999999987654322110000 00000111122344433
Q ss_pred --ccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 288 --DHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 288 --~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
+|...+..+++.+++++|++++.||.|++|++..
T Consensus 320 ~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 320 RYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 2333455677788889999999999999998753
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-34 Score=264.22 Aligned_cols=237 Identities=14% Similarity=0.156 Sum_probs=199.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..+...|.+++|+|++++|++|+.|+ +++||+.+++.+... +.+.+..+.+.++++.++.++. |++|++|
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~-------D~~i~~w 219 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR-------DKTIKMW 219 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET-------TSEEEEE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC-------CCeEEEE
Confidence 35778999999999999999999887 699999988776544 4467888888888888776664 8999999
Q ss_pred ECCCCcEEEEEec-CCceEEEEEcCCeEE--EEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCC----------
Q 019349 81 NTTTGTALRELNF-LTSILAVRLNKKRLV--IVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLN---------- 146 (342)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~~~~~~--~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 146 (342)
|+++++++..+.. ...|.++.++++... .++ |+.|++||+.+++....+..+... +.+++++|+
T Consensus 220 d~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV--VECISWAPESSYSSISEAT 297 (410)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECCSCGGGGGGGCC
T ss_pred ECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce--EEEEEEcCcccccchhhhc
Confidence 9999999988764 457999999887533 334 889999999999888888766554 555555553
Q ss_pred ----------ccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEE
Q 019349 147 ----------ACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY 216 (342)
Q Consensus 147 ----------~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~ 216 (342)
+.++++++ .||+|++||+++++++..+.+|...|++++|+|+|++|++|+.||+ |++||+.+++.+.
T Consensus 298 ~~~~~~~~~~g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCMK 374 (410)
T ss_dssp SCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCCE
T ss_pred cccccccCCCCCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceEE
Confidence 55788877 6899999999999999999999999999999999999999999997 5999999999888
Q ss_pred EeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 217 SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 217 ~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
.+..+ ...|.+++|+|++. +|++|+.||+|+||+++
T Consensus 375 ~~~~h--~~~v~~l~~~~~~~---~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 375 TLNAH--EHFVTSLDFHKTAP---YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECC--SSCEEEEEECSSSS---CEEEEETTSEEEEEC--
T ss_pred EEcCC--CCcEEEEEEcCCCC---EEEEEeCCCcEEEEeCC
Confidence 88643 55699999999999 99999999999999863
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-33 Score=251.01 Aligned_cols=283 Identities=10% Similarity=0.082 Sum_probs=199.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC--cEEEEE----eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCe
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYER----AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (342)
..+..+|.+++|+|+ +|++|+.|+ +++||+..+ +..... |...+..+.+.++++.++.++. |++
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-------D~~ 81 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF-------DST 81 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-------TSC
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-------CCc
Confidence 467889999999998 889888877 699999875 333332 4456888888888888877764 899
Q ss_pred EEEEECCC-------CcEEEEEe-cCCceEEEEEcCCeEEE--EE-CCeEEEEECCCC----ceeeEEeCCCCCceEEEE
Q 019349 77 LCLFNTTT-------GTALRELN-FLTSILAVRLNKKRLVI--VL-REKTYIYDANTL----AILDTIDTVPNLKGLCAF 141 (342)
Q Consensus 77 i~iwd~~~-------~~~~~~~~-~~~~v~~i~~~~~~~~~--~~-d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~ 141 (342)
|++||... .+.+..+. +...|.+++|+|+...+ ++ |++|++||+... +.+..+..|. ..+.++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~--~~v~~v 159 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS--QDVKHV 159 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS--SCEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC--CceEEE
Confidence 99999853 23444444 45689999999875433 34 889999999432 3455555443 457788
Q ss_pred eeCCCccEEEEeCCCCccEEEEEEccCC--ceeEEEecccCCeeEEEECCC--CCEEEEEeCCCcEEEEEEcCCC-----
Q 019349 142 SPSLNACFLAVPASTTKGSVLVYNVMEL--HSHCEIDAHQAPLAAIVLSSN--GMYIATASEQGTIIRVFLVSEA----- 212 (342)
Q Consensus 142 ~~~~~~~~l~~~~~~~~g~i~iwd~~~~--~~~~~~~~h~~~v~~i~~s~d--g~~lat~s~dg~~irlwd~~~~----- 212 (342)
+++|++.+|++++ .|++|++||..++ +++..+.+|..+|.+++|+|+ +.+|++|+.|++ ||+||+.++
T Consensus 160 ~~~p~~~~l~s~s--~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 160 IWHPSEALLASSS--YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDDQ 236 (330)
T ss_dssp EECSSSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTSC
T ss_pred EECCCCCEEEEEc--CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCcccc
Confidence 8888889999988 6899999999876 578889999999999999998 779999999998 589999764
Q ss_pred ---eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccc-ccccccccccc
Q 019349 213 ---TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILP-ESVNEVLDPAD 288 (342)
Q Consensus 213 ---~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 288 (342)
.....+. +.+...|.+++|++++ +|++++.||+|+|||+..+..... ......+.. ......|+|.
T Consensus 237 ~~~~~~~~~~-~~h~~~v~~v~~s~~~----~l~s~~~dg~v~iw~~~~~~~~~~----~~~~~~h~~~~v~~v~~~~~- 306 (330)
T 2hes_X 237 QEWVCEAILP-DVHKRQVYNVAWGFNG----LIASVGADGVLAVYEEVDGEWKVF----AKRALCHGVYEINVVKWLEL- 306 (330)
T ss_dssp EEEEEEEECC-SCCSSCEEEEEECTTS----CEEEEETTSCEEEEEEETTEEEEE----EEESCTTTTSCEEEEEEC---
T ss_pred ceeEEeeecc-cccccceEEEEEcCCC----EEEEEeCCCEEEEEEcCCCceEEE----eccccccccceEEEEEEecC-
Confidence 2333333 2245679999999765 699999999999999864421000 000000100 0011223331
Q ss_pred cceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 289 HHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
.++..|++++.||.|++|++..
T Consensus 307 -----------~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 307 -----------NGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --------------CCEEEEETTSEEEEEEC--
T ss_pred -----------CCceEEEEecCCCcEEEEEecc
Confidence 0236899999999999998653
No 24
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-33 Score=255.16 Aligned_cols=198 Identities=10% Similarity=0.122 Sum_probs=163.6
Q ss_pred EEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEE--ECCeEEEEECCCCceee
Q 019349 50 SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIV--LREKTYIYDANTLAILD 127 (342)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~--~d~~i~i~d~~~~~~~~ 127 (342)
..+++.++++++++++++ .|++|+|||+++++++..+.+...|.+++|+|+...++ +++.+.+|+..+++.+.
T Consensus 137 ~~v~fSpDg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIA 211 (365)
T ss_dssp EEEEECTTSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEE
T ss_pred EEEEEcCCCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCccee
Confidence 346666777788877763 58999999999999999999888999999999864444 38889999998887766
Q ss_pred EEeCCCCCceEEEEeeCCCccEEEEeCCCCcc----EEEEEEccCCce----eEEEecccCCeeEEEECCCCCEEEEEeC
Q 019349 128 TIDTVPNLKGLCAFSPSLNACFLAVPASTTKG----SVLVYNVMELHS----HCEIDAHQAPLAAIVLSSNGMYIATASE 199 (342)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g----~i~iwd~~~~~~----~~~~~~h~~~v~~i~~s~dg~~lat~s~ 199 (342)
......+...+.+++++|++..+++++. ++ .+++||+..... ...+.+|..+|++++|||||++||+|+.
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~--d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASL--KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEE--SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEec--CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 5544455566778888888888888763 33 788899877653 3567789999999999999999999999
Q ss_pred CCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 200 QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 200 dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
|++ |+|||+++++.+..+..+ |...|++|+||||++ +||++|.|++|+|||+...
T Consensus 290 D~~-V~iwd~~~~~~~~~~~~g-H~~~V~~v~fSpdg~---~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 290 DNS-IALVKLKDLSMSKIFKQA-HSFAITEVTISPDST---YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSC-EEEEETTTTEEEEEETTS-SSSCEEEEEECTTSC---EEEEEETTSEEEEEECCTT
T ss_pred CCE-EEEEECCCCcEEEEecCc-ccCCEEEEEECCCCC---EEEEEeCCCeEEEEEcCCC
Confidence 998 589999999999887544 456799999999999 9999999999999999654
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.6e-33 Score=257.14 Aligned_cols=302 Identities=17% Similarity=0.172 Sum_probs=217.3
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc------EEEEE--eeCCEEEEEEcCC----C---CeEEEEcC
Q 019349 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR------LCYER--AVGAFSIVEMLYS----S---SLLAIVGA 66 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~------~~~~~--~~~~~~~~~~~~~----~---~~~~~~~~ 66 (342)
...|..+|++++|+| ++|++|+.++ +++||+.+++ ..... +...+..+.+.++ + +.++.++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 357889999999999 7888888877 6999998876 44333 4466777777776 5 66665553
Q ss_pred CCCCCCCCCeEEEEECCCCcE-----EEEEecC------CceEEEEEc----CCe---EEEEE-CCeEEEEECCC-----
Q 019349 67 GEQPSLSPRRLCLFNTTTGTA-----LRELNFL------TSILAVRLN----KKR---LVIVL-REKTYIYDANT----- 122 (342)
Q Consensus 67 g~~~~~~d~~i~iwd~~~~~~-----~~~~~~~------~~v~~i~~~----~~~---~~~~~-d~~i~i~d~~~----- 122 (342)
|+.|++||+.+++. +..+... ..|.+++|+ ++. ++++. |+.|++||+.+
T Consensus 90 -------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 90 -------SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp -------TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred -------CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 89999999998886 6666544 789999999 654 33344 78999999988
Q ss_pred -Cceee-----EEeC-----CCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEec---c---cCCeeEE
Q 019349 123 -LAILD-----TIDT-----VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDA---H---QAPLAAI 185 (342)
Q Consensus 123 -~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~---h---~~~v~~i 185 (342)
++.+. .+.. ..+...+.+++++|++ .+++++ .+|.|++||+++++.+..+.. | ..+|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 66665 6643 3344557778888888 888877 689999999999999999998 9 9999999
Q ss_pred EECCCCCEEEEEeCC---CcEEEEEEcCCCeeEEEeccCc-----------CceeEEEEEEecCCCcccEEEEEeCCCcE
Q 019349 186 VLSSNGMYIATASEQ---GTIIRVFLVSEATKSYSFRRGT-----------YPSTIFSLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 186 ~~s~dg~~lat~s~d---g~~irlwd~~~~~~~~~~~~~~-----------~~~~v~~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
+|+|++++|++++.| |. |++||+++++.+..+.... +...|.+++|+|+++ +|++++.||+|
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i 315 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE---TLCSAGWDGKL 315 (397)
T ss_dssp EECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS---EEEEEETTSEE
T ss_pred EECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC---EEEEEeCCCeE
Confidence 999999999999999 87 5899999999988886410 355699999999999 99999999999
Q ss_pred EEEecCCCCCCCCCCCcccccccccccc-ccccccccccceeeeccCCCccc----------cEEEEEEeCCcEEEEEEe
Q 019349 252 HVFSPGFAINQRRGGRTSSILGSILPES-VNEVLDPADHHVLRNAFPAGVKR----------ASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~~dg~v~~~~~~ 320 (342)
+|||++..+..........-. .+..+. .........|...+..+.+.+++ +.|++++.||.|++|++.
T Consensus 316 ~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 316 RFWDVKTKERITTLNMHCDDI-EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEETTTTEEEEEEECCGGGC-SSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EEEEcCCCceeEEEecccCcc-cchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 999998765433211000000 000000 00000000001122233333433 689999999999999987
Q ss_pred c
Q 019349 321 I 321 (342)
Q Consensus 321 ~ 321 (342)
.
T Consensus 395 ~ 395 (397)
T 1sq9_A 395 G 395 (397)
T ss_dssp C
T ss_pred C
Confidence 5
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-32 Score=241.97 Aligned_cols=275 Identities=13% Similarity=0.137 Sum_probs=212.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcE---E--EE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRL---C--YE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~---~--~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i 77 (342)
.+..+|.+++|+|++++|+++++..+++||+.+++. . .. .+...+..+.+.++++.+++.+. ++.|
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i 121 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE-------ASTL 121 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES-------SSEE
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC-------CCcE
Confidence 578899999999999999999954579999987632 1 22 23466777888888888877664 8999
Q ss_pred EEEECCCCc--EEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 78 CLFNTTTGT--ALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 78 ~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
++||+.+++ ....+. +...|.+++++++. ++++. ++.|++||+++++.+..+..+.. .+.+++++|++..++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD--GASCIDISNDGTKLW 199 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC--ceEEEEECCCCCEEE
Confidence 999999887 344443 34579999998764 44444 78999999999988888865443 577788888888999
Q ss_pred EeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 152 VPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
+++ .+|.|++||+++++.+..+. |..++.+++|+|++++|++++.||. |++||+.+++.. .+. .+...|.+++
T Consensus 200 ~~~--~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~-~~~--~~~~~v~~~~ 272 (337)
T 1gxr_A 200 TGG--LDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKY-QLH--LHESCVLSLK 272 (337)
T ss_dssp EEE--TTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEE-EEC--CCSSCEEEEE
T ss_pred EEe--cCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeE-EEc--CCccceeEEE
Confidence 887 68999999999998877764 7889999999999999999999998 589999988764 343 2356799999
Q ss_pred EecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeC
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYN 311 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 311 (342)
|+|+++ +|++++.||.|++||++..+.... ...........|++ +++.|++++.|
T Consensus 273 ~~~~~~---~l~~~~~dg~i~~~~~~~~~~~~~--------~~~~~~v~~~~~s~--------------~~~~l~~~~~d 327 (337)
T 1gxr_A 273 FAYCGK---WFVSTGKDNLLNAWRTPYGASIFQ--------SKESSSVLSCDISV--------------DDKYIVTGSGD 327 (337)
T ss_dssp ECTTSS---EEEEEETTSEEEEEETTTCCEEEE--------EECSSCEEEEEECT--------------TSCEEEEEETT
T ss_pred ECCCCC---EEEEecCCCcEEEEECCCCeEEEE--------ecCCCcEEEEEECC--------------CCCEEEEecCC
Confidence 999999 999999999999999987654211 00111111223444 44899999999
Q ss_pred CcEEEEEEe
Q 019349 312 GYFVEYIFS 320 (342)
Q Consensus 312 g~v~~~~~~ 320 (342)
|.+++|++-
T Consensus 328 g~i~iw~~~ 336 (337)
T 1gxr_A 328 KKATVYEVI 336 (337)
T ss_dssp SCEEEEEEE
T ss_pred CeEEEEEEe
Confidence 999999873
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.2e-33 Score=245.01 Aligned_cols=241 Identities=13% Similarity=0.174 Sum_probs=183.3
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC--cEE--EEEeeCCEEEEEEcCC--CCeEEEEcCCCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLC--YERAVGAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~--~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (342)
...|...|++++|+|+|++||+|+.|+ ++|||++.. +.+ +..|.+.+..+.+.+. ++.++.++. |+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~-------D~ 77 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------DG 77 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-------TT
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC-------CC
Confidence 467899999999999999999998887 699998743 333 3345567777777653 566666654 89
Q ss_pred eEEEEECCCCc--EEEEEe-cCCceEEEEEcCC----eEEEEE-CCeEEEEECCCCce--eeEEeCCCCCceEEEEeeCC
Q 019349 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAI--LDTIDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 76 ~i~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~~~~-d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~ 145 (342)
+|++||+.+++ .+..+. +...|.+++|+|+ .++.++ |++|++||+++... ...+..+.. .+.+++++|
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~--~v~~~~~~p 155 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASWAP 155 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS--CEEEEEECC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC--ccceEeecC
Confidence 99999998874 444444 4568999999885 344445 88999999987632 234444433 455666666
Q ss_pred C-------------ccEEEEeCCCCccEEEEEEccCCc----eeEEEecccCCeeEEEECCCC---CEEEEEeCCCcEEE
Q 019349 146 N-------------ACFLAVPASTTKGSVLVYNVMELH----SHCEIDAHQAPLAAIVLSSNG---MYIATASEQGTIIR 205 (342)
Q Consensus 146 ~-------------~~~l~~~~~~~~g~i~iwd~~~~~----~~~~~~~h~~~v~~i~~s~dg---~~lat~s~dg~~ir 205 (342)
+ +.+|++++ .||+|++||+++++ ....+.+|..+|++++|+|++ ++||+||.|++ |+
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~ 232 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CI 232 (297)
T ss_dssp CC------------CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EE
T ss_pred CcccccccCCCCCCcceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EE
Confidence 4 45888887 68999999998766 566788999999999999985 89999999998 58
Q ss_pred EEEcCCCe---eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 206 VFLVSEAT---KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 206 lwd~~~~~---~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
+||+.+++ ....+....+...|.+++|+|+++ +||+++.||+|+||+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---CEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCC---EEEEEcCCCcEEEEEECC
Confidence 99998753 112222123356699999999999 999999999999999753
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-32 Score=263.98 Aligned_cols=272 Identities=14% Similarity=0.184 Sum_probs=212.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEE-EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLC-YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
+.+..+|.+++|+|++++|++++.++ +++||.....+. ...+...+..+.+.+++..++..+. ++.|++||
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-------dg~v~~~~ 372 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASD-------DKTVKLWN 372 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEE
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeC-------CCEEEEEc
Confidence 35678999999999999999998877 699998766543 2234466777788888888776654 89999999
Q ss_pred CCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC
Q 019349 82 TTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (342)
Q Consensus 82 ~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (342)
. +++.+..+. +...|.+++++++. ++.++ |+.|++||. +++.+..+..+.. .+.+++++|++.++++++ .
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~--~v~~~~~s~d~~~l~~~~--~ 446 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS--SVWGVAFSPDDQTIASAS--D 446 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSS--CEEEEEECTTSSEEEEEE--T
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCC--CeEEEEECCCCCEEEEEc--C
Confidence 5 567776665 45689999999875 44444 789999995 5667777766544 577788888999999988 6
Q ss_pred ccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCC
Q 019349 158 KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 237 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~ 237 (342)
|+.|++||. +++.+..+.+|..+|++++|+|||++||+++.|++ |++||. +++.+..+..+ ...|++|+|+||++
T Consensus 447 d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~~-~~~~~~~~~~h--~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 447 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLTGH--SSSVRGVAFSPDGQ 521 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEET-TSCEEEEEECC--SSCEEEEEECTTSS
T ss_pred CCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEcC-CCCEEEEEeCC--CCCEEEEEEcCCCC
Confidence 899999996 56788889999999999999999999999999997 589995 68888888643 56799999999999
Q ss_pred cccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEE
Q 019349 238 FQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEY 317 (342)
Q Consensus 238 ~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~ 317 (342)
+|++++.||+|+|||... +.... +.+ |...+..+.|.+++++|++++.||.|++|
T Consensus 522 ---~l~s~~~dg~v~lwd~~~-~~~~~-------~~~--------------h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 522 ---TIASASDDKTVKLWNRNG-QLLQT-------LTG--------------HSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp ---CEEEEETTSEEEEECTTS-CEEEE-------EEC--------------CSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ---EEEEEECcCEEEEEeCCC-CEEEE-------EcC--------------CCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 999999999999999632 21110 111 11222334445566899999999999999
Q ss_pred E
Q 019349 318 I 318 (342)
Q Consensus 318 ~ 318 (342)
+
T Consensus 577 d 577 (577)
T 2ymu_A 577 N 577 (577)
T ss_dssp C
T ss_pred C
Confidence 5
No 29
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-33 Score=255.78 Aligned_cols=293 Identities=12% Similarity=0.134 Sum_probs=222.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
+...|.+++|+|++++|++|+.++ +++|| .+++..... +...+..+.+.++.+.+++++. ++.|++||+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~ 178 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV-------ENVTILWNV 178 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEET-------TCCEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEec-------CCeEEEEEC
Confidence 566999999999999999998887 79999 555554443 4467778888888888877764 899999999
Q ss_pred CCCcEEEEEecCC-c---------------eEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeC
Q 019349 83 TTGTALRELNFLT-S---------------ILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPS 144 (342)
Q Consensus 83 ~~~~~~~~~~~~~-~---------------v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (342)
.+++.+..+.... . +.++.++++..+++. ++.|++||+.+++.+..+..+.. .+.+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~--~i~~~~~~ 256 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHG--PISVLEFN 256 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSS--CEEEEEEE
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCC--ceEEEEEC
Confidence 9999888876544 3 888888887766665 78999999999888888765444 56677777
Q ss_pred CCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCc
Q 019349 145 LNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP 224 (342)
Q Consensus 145 ~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~ 224 (342)
|++.++++++ .+|.|++||+.+++.+..+..|..+|.+++|+|++ +|++++.||. |++||+++++.+..+..+ .
T Consensus 257 ~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~~--~ 330 (425)
T 1r5m_A 257 DTNKLLLSAS--DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIVD--G 330 (425)
T ss_dssp TTTTEEEEEE--TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEECT--T
T ss_pred CCCCEEEEEc--CCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEecccC--C
Confidence 8888999887 58999999999999999999999999999999999 9999999997 589999999988887643 4
Q ss_pred eeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCC--CCccccccccccccccccccccccce--eeeccCCCc
Q 019349 225 STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRG--GRTSSILGSILPESVNEVLDPADHHV--LRNAFPAGV 300 (342)
Q Consensus 225 ~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 300 (342)
..|.+++|+|+++ +|++++.||.|++||++........ ....+.+. +.....+.....+.. .+..+.+.+
T Consensus 331 ~~i~~~~~s~~~~---~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 331 VPIFAGRISQDGQ---KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN---PLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp CCEEEEEECTTSS---EEEEEETTSCEEEEECHHHHC-----------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred ccEEEEEEcCCCC---EEEEEECCCeEEEEECCCCccceeeeecccccccC---cccchhhhhhcCcccCCceEEEEccC
Confidence 5699999999999 9999999999999999876522110 00000000 000001111112211 334455566
Q ss_pred cccEEEEEEeCCcEEEEEEe
Q 019349 301 KRASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 301 ~~~~l~~~~~dg~v~~~~~~ 320 (342)
++++|++++.||.|++|+++
T Consensus 405 ~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 405 AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TSSEEEEEESSSCCEEEECC
T ss_pred CCceEEEEecCceEEEEeec
Confidence 66899999999999999864
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2e-32 Score=250.75 Aligned_cols=237 Identities=11% Similarity=0.161 Sum_probs=195.7
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 8 YPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
..|++++|+|||++|++|+.++ +++||+.+++.+... +...+..+.+.++++.++.++. |++|++||+++
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-------d~~v~iwd~~~ 196 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-------DRTVRIWDLRT 196 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTT
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC-------CCcEEEEECCC
Confidence 3599999999999999998887 699999998776554 4466777888888888877664 89999999999
Q ss_pred CcEEEEEecCCceEEEEEcC-Ce--EEEEE-CCeEEEEECCCCceeeEEeC-----CCCCceEEEEeeCCCccEEEEeCC
Q 019349 85 GTALRELNFLTSILAVRLNK-KR--LVIVL-REKTYIYDANTLAILDTIDT-----VPNLKGLCAFSPSLNACFLAVPAS 155 (342)
Q Consensus 85 ~~~~~~~~~~~~v~~i~~~~-~~--~~~~~-d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~ 155 (342)
+++...+.....+.++++++ +. ++.++ |+.|++||+.+++.+..+.. ..+...+.+++++|++.+|++++
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s- 275 (393)
T 1erj_A 197 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS- 275 (393)
T ss_dssp TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-
T ss_pred CeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe-
Confidence 99998888888999999987 43 34444 88999999999988777632 22345678888899999999888
Q ss_pred CCccEEEEEEccCC------------ceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC
Q 019349 156 TTKGSVLVYNVMEL------------HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 156 ~~~g~i~iwd~~~~------------~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
.||.|++||+++. .+...+.+|...|.+++|+|++.+|++|+.||+ |++||+.+++.+..+..+
T Consensus 276 -~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~~h-- 351 (393)
T 1erj_A 276 -LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQGH-- 351 (393)
T ss_dssp -TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEECC--
T ss_pred -CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEECCC--
Confidence 6899999999753 345677899999999999999999999999997 589999999998888643
Q ss_pred ceeEEEEEEec------CCCcccEEEEEeCCCcEEEEecCCC
Q 019349 224 PSTIFSLSFGQ------SMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 224 ~~~v~~l~fs~------d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
...|.+++|++ ++. +|++|+.||+|+||+++..
T Consensus 352 ~~~v~~v~~~~~~~~~p~~~---~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 352 RNSVISVAVANGSSLGPEYN---VFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SSCEEEEEECSSCTTCTTCE---EEEEEETTSEEEEEEEEEC
T ss_pred CCCEEEEEecCCcCcCCCCC---EEEEECCCCcEEECccccc
Confidence 55699999986 566 9999999999999998654
No 31
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-34 Score=263.33 Aligned_cols=301 Identities=15% Similarity=0.235 Sum_probs=214.6
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCC---Cc---EEEE-EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCC
Q 019349 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSST---GR---LCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 4 ~~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~---~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (342)
..|..+|++++|+| ++++|++|+.|+ +++||+.+ +. .... .+...+..+.+.++.+.++.++. |
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK-------D 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET-------T
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC-------C
Confidence 45788999999999 999999999887 69999865 32 1222 35678888888887888877764 8
Q ss_pred CeEEEEECC---CCcEEEEEe-------------cCCceEEEE--EcCC--eEEEEE-CCeEEEEECCCCceeeEEeCCC
Q 019349 75 RRLCLFNTT---TGTALRELN-------------FLTSILAVR--LNKK--RLVIVL-REKTYIYDANTLAILDTIDTVP 133 (342)
Q Consensus 75 ~~i~iwd~~---~~~~~~~~~-------------~~~~v~~i~--~~~~--~~~~~~-d~~i~i~d~~~~~~~~~~~~~~ 133 (342)
++|++||+. +++.+.... ....+.++. ++++ .++.++ |+.|++||+++++.+..+..+.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999994 555544332 223455555 3344 334444 7899999999999999988743
Q ss_pred CCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEe-cccCCeeEEEE----CCCCCEEEEEeCCCcEEEEEE
Q 019349 134 NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEID-AHQAPLAAIVL----SSNGMYIATASEQGTIIRVFL 208 (342)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~-~h~~~v~~i~~----s~dg~~lat~s~dg~~irlwd 208 (342)
+...+.+++++|++.++++++ .||.|++||+++++++..+. .|..+|++++| +|++.+|++|+.||+ |++||
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~iwd 289 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGT--TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LTIWN 289 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEE--TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EEEEE
T ss_pred CCCceEEEEECCCCCEEEEEc--CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EEEEE
Confidence 445788888899999999888 68999999999999998886 78889999955 567889999999997 58999
Q ss_pred cCCCeeEEEeccCc------------------------CceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCC
Q 019349 209 VSEATKSYSFRRGT------------------------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRR 264 (342)
Q Consensus 209 ~~~~~~~~~~~~~~------------------------~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~ 264 (342)
+++++.+..+..+. +...|.+++|+ +++ +|++++.|++|++||++.++....
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~---~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK---ILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE---EEEEEGGGTEEEEEETTCGGGCEE
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce---EEEecCCCCeEEEEECCCcccceE
Confidence 99999888776331 33458899999 667 999999999999999988765432
Q ss_pred CCCccccccccccccc----------------cccccccccceeeeccCCCcc--ccEEEEEEeCCcEEEEE
Q 019349 265 GGRTSSILGSILPESV----------------NEVLDPADHHVLRNAFPAGVK--RASVSVITYNGYFVEYI 318 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~v~~~~ 318 (342)
..........+.+..+ ........|...+..+.+.+. ...|++++.||.|++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 1111000000000000 000111113333344444433 56999999999999994
No 32
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=264.26 Aligned_cols=303 Identities=10% Similarity=0.073 Sum_probs=221.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCC----CcEEEEE--eeCCEEEEEEcCC-CCeEEEEcCCCCCCCCCCe
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSST----GRLCYER--AVGAFSIVEMLYS-SSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~----~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~d~~ 76 (342)
.+..+|++++|+|++++|++|+.++ +++||+.+ .+..... +...+..+.+.++ .+.++..+. |++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------dg~ 137 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-------NGE 137 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS-------SSC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC-------CCe
Confidence 4678999999999999999998876 69999987 2344333 4456777788776 566666553 899
Q ss_pred EEEEECCCCc------EEEEE----ecCCceEEEEEcCC--eEEEEE--CCeEEEEECCCCceeeEEeCCCC----CceE
Q 019349 77 LCLFNTTTGT------ALREL----NFLTSILAVRLNKK--RLVIVL--REKTYIYDANTLAILDTIDTVPN----LKGL 138 (342)
Q Consensus 77 i~iwd~~~~~------~~~~~----~~~~~v~~i~~~~~--~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~----~~~~ 138 (342)
|++||+.+++ ..... .+...|.+++|+++ .++++. |+.|++||+++++.+..+..+.. ...+
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 9999998876 33322 34568999999987 344443 78999999999998888865431 3467
Q ss_pred EEEeeCCCc-cEEEEeCCCCcc---EEEEEEccCC-ceeEEEe-cccCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCC
Q 019349 139 CAFSPSLNA-CFLAVPASTTKG---SVLVYNVMEL-HSHCEID-AHQAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 139 ~~~~~~~~~-~~l~~~~~~~~g---~i~iwd~~~~-~~~~~~~-~h~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~ 211 (342)
.+++++|++ .++++++ .++ .|++||++++ +++..+. +|..+|++++|+| ++++|++++.||+ |++||+++
T Consensus 218 ~~~~~~~~~~~~l~~~~--~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~ 294 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATAT--GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPES 294 (416)
T ss_dssp EEEEECSSCTTEEEEEE--CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSS
T ss_pred EEEEECCCCCCEEEEEE--CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCC
Confidence 788888876 5777776 467 9999999986 5677788 8999999999999 9999999999997 58999999
Q ss_pred CeeEEEeccCcCceeEEEEEEecCC-CcccEEEEEeCCCcEEEEecCCCCCCCCCCC--------cccccc--c---ccc
Q 019349 212 ATKSYSFRRGTYPSTIFSLSFGQSM-QFQDILVATSSSGSLHVFSPGFAINQRRGGR--------TSSILG--S---ILP 277 (342)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~l~fs~d~-~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~--------~~~~~~--~---~~~ 277 (342)
++.+..+..+ ...|.+++|+|++ . +|++++.||+|+|||++.......... ...+.. . ..+
T Consensus 295 ~~~~~~~~~~--~~~v~~~~~s~~~~~---~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (416)
T 2pm9_A 295 AEQLSQFPAR--GNWCFKTKFAPEAPD---LFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKE 369 (416)
T ss_dssp CCEEEEEECS--SSCCCCEEECTTCTT---EEEECCSSSEEEEEESCCCCCSSCC----------------------CCS
T ss_pred CccceeecCC--CCceEEEEECCCCCC---EEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccc
Confidence 9999888643 4569999999998 7 999999999999999987765432111 000000 0 000
Q ss_pred ccccccc-cccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 278 ESVNEVL-DPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 278 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
......| .+..+...+..+.+.+++..|++++.||.|++|++..+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 370 KPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 0000011 11112223335566777789999999999999987653
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.1e-32 Score=239.82 Aligned_cols=238 Identities=15% Similarity=0.197 Sum_probs=193.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|...|.+++|+|++++|++|+.|+ +++||+.+++..... +...+..+.+.++.+.++..+. |++|++|
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------D~~i~vw 134 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR-------DKTIKVW 134 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET-------TSCEEEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC-------CCeEEEE
Confidence 35788999999999999999998887 699999999776544 4466777888777777776664 8999999
Q ss_pred ECCCCcEEEEE-ecCCceEEEEEcCC--------eEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 81 NTTTGTALREL-NFLTSILAVRLNKK--------RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 81 d~~~~~~~~~~-~~~~~v~~i~~~~~--------~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
|++. +++..+ .+...|.++.+.+. .++.++ |+.|++||+++.+....+..|.. .+.+++++|++.+|
T Consensus 135 d~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~sp~g~~l 211 (319)
T 3frx_A 135 TIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS--NINTLTASPDGTLI 211 (319)
T ss_dssp ETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS--CEEEEEECTTSSEE
T ss_pred ECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC--cEEEEEEcCCCCEE
Confidence 9964 455554 45568999999874 234444 88999999999988877765544 57778888899999
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc------Cc
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT------YP 224 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~------~~ 224 (342)
++++ .||+|++||+.+++.+..+..| .+|.+++|+|++.+|++++.++ +++|++..+..+..+.... +.
T Consensus 212 ~s~~--~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~--i~v~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T 3frx_A 212 ASAG--KDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATG--IKVFSLDPQYLVDDLRPEFAGYSKAAE 286 (319)
T ss_dssp EEEE--TTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTE--EEEEEETTEEEEEEECCCCTTCCGGGC
T ss_pred EEEe--CCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCC--cEEEEeCcCeeeeccCccccccccCcC
Confidence 9988 6899999999999998888764 6899999999999999998765 5899999888777664321 23
Q ss_pred eeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 225 STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 225 ~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
..+.+++|+||++ +|++|+.||+|+|||+.+.
T Consensus 287 ~~v~~~~~spdg~---~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 287 PHAVSLAWSADGQ---TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCEEEEEECTTSS---EEEEEETTSCEEEEEEEEC
T ss_pred cceeEEEECCCCC---EEEEeecCceEEEEEEeec
Confidence 4589999999999 9999999999999998653
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-32 Score=248.16 Aligned_cols=237 Identities=14% Similarity=0.100 Sum_probs=193.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc--EEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR--LCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
.+..+|++++|+|++++|++|+.++ +++||+.+++ ..... +...+..+.+.++++.+++++. |+.|++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-------dg~i~v 78 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-------DRNAYV 78 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-------TSCEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC-------CCeEEE
Confidence 4678999999999999999997776 6999998886 44333 4467788888888888877764 899999
Q ss_pred EECCCCcEEEEEe---cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCce---eeEEeCCCCCceEEEEeeCCCccEE
Q 019349 80 FNTTTGTALRELN---FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAI---LDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 80 wd~~~~~~~~~~~---~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
||+.+++...... +...|.+++|+++. ++++. ++.|++||+...+. ...+. ..+...+.+++++|++.++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSEE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCEE
Confidence 9999887655543 45689999998764 44444 78999999987753 33332 2334568888888999999
Q ss_pred EEeCCCCccEEEEEEc------------------cCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 019349 151 AVPASTTKGSVLVYNV------------------MELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~------------------~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~ 212 (342)
++++ .+|.|++||+ ..++.+..+.+|..+|++++|+|++++|++++.||. |++||++++
T Consensus 158 ~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~ 234 (372)
T 1k8k_C 158 AAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADKK 234 (372)
T ss_dssp EEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGGT
T ss_pred EEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCCC
Confidence 9887 5899999995 367788888899999999999999999999999997 589999999
Q ss_pred eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 213 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 213 ~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
+.+..+..+ ...|.+++|+|++. +|+++ .|+.|++|+++.
T Consensus 235 ~~~~~~~~~--~~~v~~~~~~~~~~---~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 235 MAVATLASE--TLPLLAVTFITESS---LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp TEEEEEECS--SCCEEEEEEEETTE---EEEEE-TTSSCEEEEEET
T ss_pred ceeEEEccC--CCCeEEEEEecCCC---EEEEE-eCCeEEEEEccC
Confidence 998888643 45699999999998 77776 999999999987
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.2e-32 Score=241.82 Aligned_cols=245 Identities=9% Similarity=0.105 Sum_probs=193.3
Q ss_pred EEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC-CceEEEEEcCCe--EEEEE-CCeE
Q 019349 40 LCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSILAVRLNKKR--LVIVL-REKT 115 (342)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~i~~~~~~--~~~~~-d~~i 115 (342)
..+..+...+..+.+.+++..++..+. |++|++||+.+++.+..+..+ .+|.++.|+++. ++.++ |++|
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~-------dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLY-------SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEET-------TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcC-------CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 345667788999999998888887764 899999999999998888754 589999998764 44444 8899
Q ss_pred EEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCC-ceeEEEecccCCeeEEEECC-CCCE
Q 019349 116 YIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL-HSHCEIDAHQAPLAAIVLSS-NGMY 193 (342)
Q Consensus 116 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~-~~~~~~~~h~~~v~~i~~s~-dg~~ 193 (342)
++||+.+++.+..+..|.. .+.+++++|++.++++++ .||+|++||++++ .....+.+|...|++++|+| ++.+
T Consensus 80 ~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPD--YIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEETTTCCEEEEEECCSS--CEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred EEEECCCCcEEEEEeCCCC--cEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 9999999999988876654 577778888888999888 6899999999887 45577889999999999999 6899
Q ss_pred EEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEec--CCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccc
Q 019349 194 IATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ--SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSI 271 (342)
Q Consensus 194 lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~--d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~ 271 (342)
||+|+.||+ |++||+.+++....+..+ +...+..++|+| ++. +|++++.|++|++||+++.+....
T Consensus 156 l~sgs~D~~-v~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~---~l~s~s~D~~i~iWd~~~~~~~~~------- 223 (304)
T 2ynn_A 156 FASGCLDRT-VKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKP---YMITASDDLTIKIWDYQTKSCVAT------- 223 (304)
T ss_dssp EEEEETTSE-EEEEETTCSSCSEEEECC-CTTCEEEEEECCSTTCC---EEEEEETTSEEEEEETTTTEEEEE-------
T ss_pred EEEEeCCCe-EEEEECCCCCccceeccC-CcCcEEEEEEEEcCCCC---EEEEEcCCCeEEEEeCCCCcccee-------
Confidence 999999997 589999988776666543 334588889886 677 999999999999999987654221
Q ss_pred ccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 272 LGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
+.++.. .+..+.+.++++.|++++.||.|++|++..
T Consensus 224 ~~~h~~--------------~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 224 LEGHMS--------------NVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EECCSS--------------CEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred eCCCCC--------------CEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 111111 122233344457899999999999998654
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-32 Score=249.96 Aligned_cols=277 Identities=9% Similarity=0.027 Sum_probs=201.6
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCc-EEEEeCCCCcEEEEE----eeCCEEEEEEcC-CCCeEEEEcCCCCCCCCCCe
Q 019349 4 QSSSYPVFFVSFNQDN-SGFALSTKDG-FKIFDSSTGRLCYER----AVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~-~~la~g~~~g-~~v~d~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~ 76 (342)
..+...|++++|+|++ ++|++|+.++ +++||+.+++..... +...+..+.+.+ +.+.++.++ .|++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~d~~ 142 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS-------IRGA 142 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------TTTE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------CCCE
Confidence 4577899999999999 8999998877 699999988665443 345677777766 345555554 4899
Q ss_pred EEEEECCCCcEEEEEec-C---CceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCcc-
Q 019349 77 LCLFNTTTGTALRELNF-L---TSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNAC- 148 (342)
Q Consensus 77 i~iwd~~~~~~~~~~~~-~---~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (342)
|++||+.+ ..+..+.. . ..|.+++++++. ++.+. |+.|++||+ +++.+..+..+.. .+.+++++|++.
T Consensus 143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~--~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA--KVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS--CEEEEEECSSCTT
T ss_pred EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC--cEEEEEECCCCCC
Confidence 99999986 44444432 2 569999998864 33344 889999999 5667777765544 577788888887
Q ss_pred EEEEeCCCCccEEEEEEccC----CceeEEEecccCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC
Q 019349 149 FLAVPASTTKGSVLVYNVME----LHSHCEIDAHQAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~----~~~~~~~~~h~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
++++++ .||.|++||+++ +..+..+ +|..+|++++|+| +|++|++++.||+ |++||+++++.+..+..+..
T Consensus 219 ~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 219 LMATSS--VDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp EEEEEE--TTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCB
T ss_pred EEEEEe--CCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCccccccccccc
Confidence 788777 689999999987 5566656 7999999999999 9999999999997 58999998876655542210
Q ss_pred ---------------ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccc-ccccc
Q 019349 224 ---------------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNE-VLDPA 287 (342)
Q Consensus 224 ---------------~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 287 (342)
...+..++|+||++ + +++.||+|+|||+++++...... +......+.. .|+|+
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~---~--s~s~d~~i~iwd~~~~~~~~~l~------~~~~~~~~~~~~~s~~ 363 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQ---L--LLNDKRTIDIYDANSGGLVHQLR------DPNAAGIISLNKFSPT 363 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTT---T--CTTCCCCEEEEETTTCCEEEEEC------BTTBCSCCCEEEECTT
T ss_pred cccccccceEEeccCCCCceEEEecCCcc---c--ccCCCCeEEEEecCCCceeeeec------CCCCCceEEEEEEecC
Confidence 12355678888887 4 88899999999998766433211 0000111122 34443
Q ss_pred ccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 288 DHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
+..|++++ ||.|++|+++.
T Consensus 364 --------------g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 364 --------------GDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp --------------SSEEEEEE-TTEEEEEECC-
T ss_pred --------------ccEEEEec-CCcEEEEecCC
Confidence 37788885 99999998753
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-32 Score=268.16 Aligned_cols=298 Identities=11% Similarity=0.101 Sum_probs=213.4
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCc-EEEEeCCCCc-----E--EEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCC
Q 019349 4 QSSSYPVFFVSFNQDN-SGFALSTKDG-FKIFDSSTGR-----L--CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~-~~la~g~~~g-~~v~d~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (342)
..|...|++++|+|++ ++|++|+.|+ +++|++.+.. . .+..|.+.+..+.+.++++.++.++. |
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~-------D 451 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW-------D 451 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET-------T
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC-------C
Confidence 4688999999999875 6889998887 6999987642 1 23445567888888888888877664 8
Q ss_pred CeEEEEECCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeC-CCCCceEEEEeeCCCc--
Q 019349 75 RRLCLFNTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDT-VPNLKGLCAFSPSLNA-- 147 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 147 (342)
++|++||+.+++.+..+. +...|.+++|+++. ++.++ |++|++||+........... ..+...+.+++++|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 999999999999888775 45689999998874 44444 88999999865533222211 2233456667776654
Q ss_pred cEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeE
Q 019349 148 CFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTI 227 (342)
Q Consensus 148 ~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v 227 (342)
..+++++ .||+|++||+++++....+.+|...|++++|+|+|++|++|+.||+ |++||+++++.+..+.. ...|
T Consensus 532 ~~l~s~s--~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~~---~~~v 605 (694)
T 3dm0_A 532 PTIVSAS--WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEA---NSVI 605 (694)
T ss_dssp CEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCBC---SSCE
T ss_pred ceEEEEe--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEecC---CCcE
Confidence 5777777 6899999999999999999999999999999999999999999998 58999999998877643 3469
Q ss_pred EEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEE
Q 019349 228 FSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSV 307 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
.+++|+|++. +|++++ ++.|+|||++................... .. ...-....+......+.+.+++..|++
T Consensus 606 ~~~~~sp~~~---~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 606 HALCFSPNRY---WLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKA-DN-SGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp EEEEECSSSS---EEEEEE-TTEEEEEETTTTEEEEEECCCCC------------------CCCCEEEEEECTTSSEEEE
T ss_pred EEEEEcCCCc---EEEEEc-CCCEEEEECCCCCChhhhccccccccccc-cc-cccccCCceeEEeeeEEEcCCCCEEEE
Confidence 9999999998 666554 56799999987654321110000000000 00 000000000011223445666689999
Q ss_pred EEeCCcEEEEEEe
Q 019349 308 ITYNGYFVEYIFS 320 (342)
Q Consensus 308 ~~~dg~v~~~~~~ 320 (342)
++.||.|++|++.
T Consensus 680 gs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 680 GYTDGVIRVWGIG 692 (694)
T ss_dssp EETTSEEEEEEC-
T ss_pred EcCCCeEEEEecc
Confidence 9999999999874
No 38
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.9e-33 Score=249.16 Aligned_cols=285 Identities=13% Similarity=0.121 Sum_probs=209.5
Q ss_pred CCCCCCeEEEEEcCC---CC--EEEEEcCCcEEEEeCCCCcEEEEEe-------eCCEEEEEEcCCC----CeEEEEcCC
Q 019349 4 QSSSYPVFFVSFNQD---NS--GFALSTKDGFKIFDSSTGRLCYERA-------VGAFSIVEMLYSS----SLLAIVGAG 67 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d---~~--~la~g~~~g~~v~d~~~~~~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~g 67 (342)
..|..+|++++|+|+ +. ++++++++.+++||+.+++.+.... ...+..+.+.++. ..+++++
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-- 92 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG-- 92 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE--
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec--
Confidence 368899999999984 33 5566666778999998775543221 1457777777763 3455444
Q ss_pred CCCCCCCCeEEEEECCCCcEEEEEe-cCCceEEEEEcC-C--eEEEEE-CCeEEEEECCCCceeeEEeC-CCCCceEEEE
Q 019349 68 EQPSLSPRRLCLFNTTTGTALRELN-FLTSILAVRLNK-K--RLVIVL-REKTYIYDANTLAILDTIDT-VPNLKGLCAF 141 (342)
Q Consensus 68 ~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~i~~~~-~--~~~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~ 141 (342)
.|+.|++||+.+++.+..+. +...|.+++|++ + .++.++ |+.|++||+.+++.+..+.. ..+...+.++
T Consensus 93 -----~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 -----SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp -----TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred -----CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 48999999999999998887 566999999987 4 344444 88999999999988887732 2344568888
Q ss_pred eeCCCccEEEEeCCCCccEEEEEEccCCceeEEEe----------------------------cccCCeeEEEECCCCCE
Q 019349 142 SPSLNACFLAVPASTTKGSVLVYNVMELHSHCEID----------------------------AHQAPLAAIVLSSNGMY 193 (342)
Q Consensus 142 ~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~----------------------------~h~~~v~~i~~s~dg~~ 193 (342)
+++|++.++++++ .||.|++||+++++....+. +|..+|.+++|+ +++
T Consensus 168 ~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 168 DYDLLGEKIMSCG--MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred EECCCCCEEEEec--CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 8888999999888 58999999998876544333 399999999998 789
Q ss_pred EEEEeCCCcEEEEEEcCCCee--------------EEEeccCcCceeEEEEEEecC--CCcccEEEEEeCCCcEEEEecC
Q 019349 194 IATASEQGTIIRVFLVSEATK--------------SYSFRRGTYPSTIFSLSFGQS--MQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 194 lat~s~dg~~irlwd~~~~~~--------------~~~~~~~~~~~~v~~l~fs~d--~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
|++++.||. |++||+.+++. +..+.. +...|.+++|+|+ ++ +|++++.||.|++||++
T Consensus 244 l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~---~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 244 ILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQK---MLALGNQVGKLYVWDLE 317 (366)
T ss_dssp EEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSS---EEEEECTTSCEEEEECC
T ss_pred EEEEecCCE-EEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCc---EEEEEecCCcEEEEECC
Confidence 999999997 58999988743 555543 3456889999999 88 99999999999999998
Q ss_pred CCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEe
Q 019349 258 FAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~ 320 (342)
..+...... ..+... .+...+..+.+.++++.|++++.||.|++|++.
T Consensus 318 ~~~~~~~~~---~~~~~~------------~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 318 VEDPHKAKC---TTLTHH------------KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSSGGGCEE---EEECCT------------TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCccccc---eEEccc------------ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 765422100 001111 001112223334445899999999999999864
No 39
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.5e-32 Score=244.30 Aligned_cols=233 Identities=11% Similarity=0.106 Sum_probs=189.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc----EEE--EEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR----LCY--ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i 77 (342)
.+...|.+++|+|++++|++|+.++ +++|++.+.+ ... ..+.+.+..+.+..+. .++..+ .|++|
T Consensus 95 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s-------~d~~i 166 (340)
T 1got_B 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSS-------GDTTC 166 (340)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEE-------TTSCE
T ss_pred cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEE-------CCCcE
Confidence 4667899999999999999998887 5999997752 222 2334556666665443 444444 38999
Q ss_pred EEEECCCCcEEEEEe-cCCceEEEEEcCCeEE--EEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 78 CLFNTTTGTALRELN-FLTSILAVRLNKKRLV--IVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 78 ~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~~~--~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
++||+.+++++..+. +...|.+++++++... .++ |+.|++||+++++.+..+..+.. .+.+++++|++.+++++
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~ 244 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES--DINAICFFPNGNAFATG 244 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--CEEEEEECTTSSEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC--CEEEEEEcCCCCEEEEE
Confidence 999999999988876 4558999999987533 333 88999999999998888866544 57778888888999998
Q ss_pred CCCCccEEEEEEccCCceeEEEec--ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDA--HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~--h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
+ .||+|++||+++++.+..+.. +...|++++|+|+|++|++|+.||+ |++||+.+++.+..+.. +...|.+++
T Consensus 245 s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~~--h~~~v~~~~ 319 (340)
T 1got_B 245 S--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAG--HDNRVSCLG 319 (340)
T ss_dssp E--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEEE
T ss_pred c--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEeec--CCCcEEEEE
Confidence 8 689999999999888776653 3457999999999999999999997 58999999998888864 356799999
Q ss_pred EecCCCcccEEEEEeCCCcEEEEe
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFS 255 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd 255 (342)
|+||+. +|++|+.|++|+|||
T Consensus 320 ~s~dg~---~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGM---AVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSS---CEEEEETTSCEEEEC
T ss_pred EcCCCC---EEEEEcCCccEEecC
Confidence 999999 999999999999996
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-33 Score=258.84 Aligned_cols=278 Identities=9% Similarity=0.016 Sum_probs=210.1
Q ss_pred eEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEE-EEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 10 VFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSI-VEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
+++++|+|++++|++|+.++ +++||+.+++.......+.+.. ..+.++++.+++.+. |+.|++||+.+++.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTT-------EGDIKVLDSNFNLQ 131 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEET-------TSCEEEECTTSCEE
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEEC-------CCCEEEEeCCCcce
Confidence 45789999999999998777 6999998764433222334433 345566777776654 89999999999888
Q ss_pred EEEE-ecCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEE
Q 019349 88 LREL-NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLV 163 (342)
Q Consensus 88 ~~~~-~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~i 163 (342)
+..+ .+...|.+++|+++. ++.++ |+.|++||+.+++.+..+..+.. .+.+++++|++.++++++ .||.|++
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~--~d~~v~i 207 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA--TVTDIAIIDRGRNVLSAS--LDGTIRL 207 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS--CEEEEEEETTTTEEEEEE--TTSCEEE
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC--cEEEEEEcCCCCEEEEEc--CCCcEEE
Confidence 7775 456799999998874 44444 78999999999988888876544 577777788888999888 6899999
Q ss_pred EEccCCceeEEEecc---c---------------------CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 164 YNVMELHSHCEIDAH---Q---------------------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 164 wd~~~~~~~~~~~~h---~---------------------~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
||+++++.+..+..| . .++++++|+|+|++|++|+.||. |++||+++++.+..+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEEEEEC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCceeEEcc
Confidence 999999988888753 3 44555666899999999999998 5899999999888775
Q ss_pred cCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCC
Q 019349 220 RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAG 299 (342)
Q Consensus 220 ~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (342)
.+ +...|.+++|+|++. .+|++++.||.|++||++....+.. .+.......+..++.+
T Consensus 287 ~~-~~~~v~~~~~~~~~~--~~l~~g~~dg~i~vwd~~~~~~~~~------~~~~~~~~~v~~~~~~------------- 344 (420)
T 3vl1_A 287 SK-FTCSCNSLTVDGNNA--NYIYAGYENGMLAQWDLRSPECPVG------EFLINEGTPINNVYFA------------- 344 (420)
T ss_dssp CT-TSSCEEEEEECSSCT--TEEEEEETTSEEEEEETTCTTSCSE------EEEESTTSCEEEEEEE-------------
T ss_pred cc-cCCCceeEEEeCCCC--CEEEEEeCCCeEEEEEcCCCcCchh------hhhccCCCCceEEEeC-------------
Confidence 43 456799999999986 3899999999999999987643210 0111111122223333
Q ss_pred ccccEEEEEEeCCcEEEEEEecC
Q 019349 300 VKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 300 ~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
++..|++++.||.+++|++...
T Consensus 345 -~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 345 -AGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp -TTEEEEEETTTEEEEEEEECCT
T ss_pred -CCCEEEEecCCccEEEEeccCC
Confidence 2368999999999999998753
No 41
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.5e-31 Score=239.21 Aligned_cols=233 Identities=11% Similarity=0.110 Sum_probs=193.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC--------cEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCe
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--------RLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (342)
+...|.+++|+|+|.+|++|+.++ +++|++... ......+...+..+.+.++...++.++. |++
T Consensus 105 ~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-------D~~ 177 (354)
T 2pbi_B 105 PCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG-------DGT 177 (354)
T ss_dssp SSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET-------TSE
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC-------CCc
Confidence 456789999999999999999887 599987543 2234456677888888888888877765 899
Q ss_pred EEEEECCCCcEEEEEec-CCceEEEEEcCC----eEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 77 LCLFNTTTGTALRELNF-LTSILAVRLNKK----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 77 i~iwd~~~~~~~~~~~~-~~~v~~i~~~~~----~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
|++||+++++++..+.. ...|.++.++++ .++.++ |++|++||+++++.+..+..+.. .+.+++++|++.++
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l 255 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES--DVNSVRYYPSGDAF 255 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEE
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC--CeEEEEEeCCCCEE
Confidence 99999999999988864 458999988652 344455 89999999999999888866544 57777888888899
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEecc--cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEE
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEIDAH--QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIF 228 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~~h--~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~ 228 (342)
++++ .|++|++||+++.+.+..+..+ ...+++++|+|+|++|++|+.|++ |++||+.+++.+..+.. +...|.
T Consensus 256 ~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~~--h~~~v~ 330 (354)
T 2pbi_B 256 ASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILFG--HENRVS 330 (354)
T ss_dssp EEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEECC--CSSCEE
T ss_pred EEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEEC--CCCcEE
Confidence 9988 6899999999998877666543 457899999999999999999998 58999999998888754 356799
Q ss_pred EEEEecCCCcccEEEEEeCCCcEEEEe
Q 019349 229 SLSFGQSMQFQDILVATSSSGSLHVFS 255 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~s~dg~i~vwd 255 (342)
+++|+||++ +|++++.||+|+||+
T Consensus 331 ~l~~spdg~---~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGT---AFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSS---CEEEEETTSEEEEEC
T ss_pred EEEECCCCC---EEEEEcCCCCEEecC
Confidence 999999999 999999999999996
No 42
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-32 Score=242.58 Aligned_cols=302 Identities=11% Similarity=0.168 Sum_probs=211.6
Q ss_pred CCCCCeEEEEEcCCCCEE-EEEcC---Cc-EEEEeCCCCcEEEE---EeeCCEEEEEEcCC---CCeEEEEcCCCCCCCC
Q 019349 5 SSSYPVFFVSFNQDNSGF-ALSTK---DG-FKIFDSSTGRLCYE---RAVGAFSIVEMLYS---SSLLAIVGAGEQPSLS 73 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~l-a~g~~---~g-~~v~d~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~ 73 (342)
.+..+|.+++|+|++..| ++|+. ++ +++||+.+++.... .+...+..+.+.++ ++.++..+.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~------- 88 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF------- 88 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET-------
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC-------
Confidence 478899999999999765 56654 55 69999998865422 34467877887776 366666553
Q ss_pred CCeEEEEECCCCc-EEEEEe-cCCceEEEEE------cCC--eEEEEE-CCeEEEEECCCCc-eeeEEeCCCC--CceEE
Q 019349 74 PRRLCLFNTTTGT-ALRELN-FLTSILAVRL------NKK--RLVIVL-REKTYIYDANTLA-ILDTIDTVPN--LKGLC 139 (342)
Q Consensus 74 d~~i~iwd~~~~~-~~~~~~-~~~~v~~i~~------~~~--~~~~~~-d~~i~i~d~~~~~-~~~~~~~~~~--~~~~~ 139 (342)
|+.|++||+.+++ .+..+. +...|.++.+ +++ .++.++ |+.|++||+.+++ .+..+..+.. ...+.
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 8999999999887 777665 4558999965 344 444444 8899999999886 6677755433 23455
Q ss_pred EEe----eCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECC---CCCEEEEEeCCCcEEEEEEcCCC
Q 019349 140 AFS----PSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSS---NGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 140 ~~~----~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~---dg~~lat~s~dg~~irlwd~~~~ 212 (342)
++. +++++.++++++ .+|.|++||+++++... ...|..+|.+++|+| ++++|++++.||. |++||++++
T Consensus 169 ~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~ 244 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMRTQ 244 (357)
T ss_dssp EEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEc--cCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCcCC
Confidence 555 667888999887 58999999999988743 467899999999999 9999999999997 589999887
Q ss_pred eeEEEec---cCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccccccccccc
Q 019349 213 TKSYSFR---RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADH 289 (342)
Q Consensus 213 ~~~~~~~---~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (342)
+.+..+. ...+...|.+++|+|++. .+|++++.||.|++||++...............+ . +.....+.....|
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNR--ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMG-V-AGSVSLLQNVTLS 320 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEE--EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCC-C-CCEEEEEEEEECC
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCC--cEEEEEeCCCcEEEeecCCCcccccccCCCCccc-c-ccccceeeccccC
Confidence 6544432 112355699999999986 3699999999999999987654322111110000 0 0000111112222
Q ss_pred ceeeeccCCCccccEEE-EEEeCCcEEEEEEec
Q 019349 290 HVLRNAFPAGVKRASVS-VITYNGYFVEYIFSI 321 (342)
Q Consensus 290 ~~~~~~~~~~~~~~~l~-~~~~dg~v~~~~~~~ 321 (342)
...+..+.+.+++..|+ +++.||.|++|++..
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 22334445556667888 799999999999864
No 43
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.2e-31 Score=246.90 Aligned_cols=280 Identities=13% Similarity=0.172 Sum_probs=208.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
.+...|.+++| ++++|++|+.++ +++||+.+++.......+.-.+.++.++++.++..+. |++|++||+.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~-------dg~i~vwd~~ 201 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSS-------DSTVRVWDVN 201 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEET-------TSCEEEEESS
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcC-------CCeEEEEECC
Confidence 45567999888 788999998887 6999999998776655444344455557777766654 8999999999
Q ss_pred CCcEEEEEec-CCceEEEEEcCCeEEEEE-CCeEEEEECCCCcee---eEEeCCCCCceEEEEeeCCCccEEEEeCCCCc
Q 019349 84 TGTALRELNF-LTSILAVRLNKKRLVIVL-REKTYIYDANTLAIL---DTIDTVPNLKGLCAFSPSLNACFLAVPASTTK 158 (342)
Q Consensus 84 ~~~~~~~~~~-~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 158 (342)
+++.+..+.. ...|.++.++++.++.++ |+.|++||+.+++.. ..+..+ ...+.++++ ++.++++++ .|
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~s~~--~d 275 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH--RAAVNVVDF--DDKYIVSAS--GD 275 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCC--SSCEEEEEE--ETTEEEEEE--TT
T ss_pred CCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCC--CCcEEEEEe--CCCEEEEEe--CC
Confidence 9999888764 458999999998877777 889999999887654 334333 345666776 455888887 58
Q ss_pred cEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCc
Q 019349 159 GSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQF 238 (342)
Q Consensus 159 g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~ 238 (342)
|.|++||+++++.+..+.+|..+|.++++ ++++|++|+.||+ |++||+++++.+..+.. +...|.+++| ++.
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~- 347 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLEG--HEELVRCIRF--DNK- 347 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECC--CSSCEEEEEC--CSS-
T ss_pred CeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEeC--CcCcEEEEEe--cCC-
Confidence 99999999999999999999999999999 4689999999998 58999999999988864 3556999998 677
Q ss_pred ccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEE
Q 019349 239 QDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 318 (342)
Q Consensus 239 ~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~ 318 (342)
+|++|+.||+|++||++....+...... .. +.....|...+..+.+ ++..|++++.||.|++|+
T Consensus 348 --~l~sg~~dg~i~vwd~~~~~~~~~~~~~-~~-----------~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 348 --RIVSGAYDGKIKVWDLVAALDPRAPAGT-LC-----------LRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp --EEEEEETTSCEEEEEHHHHTSTTSCTTT-TE-----------EEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred --EEEEEeCCCcEEEEECCCCCCccccccc-hh-----------eeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 9999999999999999766532211000 00 0011111111222222 347899999999999999
Q ss_pred EecCC
Q 019349 319 FSINN 323 (342)
Q Consensus 319 ~~~~~ 323 (342)
+....
T Consensus 412 ~~~~~ 416 (435)
T 1p22_A 412 FLNDP 416 (435)
T ss_dssp -----
T ss_pred CCCCC
Confidence 87543
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-31 Score=246.38 Aligned_cols=286 Identities=14% Similarity=0.149 Sum_probs=210.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC
Q 019349 9 PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~ 85 (342)
.+....|+|++++|++|+.++ +++||+.+++.... .+...+..+.+.++++.++.++. |++|++||+.++
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~ 171 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ-------DMQLKIWSVKDG 171 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTC
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC-------CCeEEEEeCCCC
Confidence 345558899999999998887 69999998877655 34567888888888887777664 899999999999
Q ss_pred cEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCC-ceE---------------------E
Q 019349 86 TALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNL-KGL---------------------C 139 (342)
Q Consensus 86 ~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~-~~~---------------------~ 139 (342)
+.+..+. +...|.+++|+++. ++.++ |+.|++||+++++.+..+..+... ..+ .
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 9888876 45689999998764 44444 889999999999988888653321 122 2
Q ss_pred EEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEe-cccCCeeEEEECCCCC-EEEEEeCCCcEEEEEEcCCCee-EE
Q 019349 140 AFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEID-AHQAPLAAIVLSSNGM-YIATASEQGTIIRVFLVSEATK-SY 216 (342)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~-~h~~~v~~i~~s~dg~-~lat~s~dg~~irlwd~~~~~~-~~ 216 (342)
+++++|++.++++++ .+|.|++||+++++.+..+. .|..+|++++|+|+++ +|++|+.||. |++||+++++. +.
T Consensus 252 ~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGH--VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECPVG 328 (420)
T ss_dssp TTCSSCTTEEEEEEE--TTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSE
T ss_pred ceEEcCCCCEEEEEc--CCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcCchh
Confidence 234567888998887 68999999999998777665 5889999999999999 9999999997 58999998754 56
Q ss_pred EeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCC--ccccccccccccccccccccccceeee
Q 019349 217 SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGR--TSSILGSILPESVNEVLDPADHHVLRN 294 (342)
Q Consensus 217 ~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
.+..+ +...|.++.| ++++ +|++++.||+|++|++..+..++.... ....+...........|+|++
T Consensus 329 ~~~~~-~~~~v~~~~~-~~~~---~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~------ 397 (420)
T 3vl1_A 329 EFLIN-EGTPINNVYF-AAGA---LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDD------ 397 (420)
T ss_dssp EEEES-TTSCEEEEEE-ETTE---EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCS------
T ss_pred hhhcc-CCCCceEEEe-CCCC---EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCC------
Confidence 66542 3456888855 5777 899999999999999987654332100 000011111111112333322
Q ss_pred ccCCCccccEEEEEEeCCcEEEEEEe
Q 019349 295 AFPAGVKRASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 295 ~~~~~~~~~~l~~~~~dg~v~~~~~~ 320 (342)
..+..|++++.+|.+.+|+++
T Consensus 398 -----~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 398 -----ESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp -----SSSCEEEEEETTTEEEEEESC
T ss_pred -----CCcceEEEEcCCceEEEEecc
Confidence 111279999999999999864
No 45
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.6e-32 Score=252.06 Aligned_cols=242 Identities=11% Similarity=0.136 Sum_probs=180.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc-----------EEEEE--ee------------CCEEEEEEcCCC-
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR-----------LCYER--AV------------GAFSIVEMLYSS- 58 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~-----------~~~~~--~~------------~~~~~~~~~~~~- 58 (342)
+.+.|++++|+|+|++||+|+.++ ++|||+.+++ ..... +. ..+..+.+.++.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 457999999999999999999887 6999998765 23333 32 347777887776
Q ss_pred -CeEEEEcCCCCCCCCCCeEEEEECCCCcEEE---------------------------------------EE--ecCCc
Q 019349 59 -SLLAIVGAGEQPSLSPRRLCLFNTTTGTALR---------------------------------------EL--NFLTS 96 (342)
Q Consensus 59 -~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~---------------------------------------~~--~~~~~ 96 (342)
..+++++ .|++|++||+.+++... .+ .+...
T Consensus 107 ~~~l~s~s-------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 107 AAQFLLST-------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp SSEEEEEE-------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred cceEEEeC-------CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 4566555 38999999987644321 11 24558
Q ss_pred eEEEEEcCCeEEE--EECCeEEEEECCC-CceeeEEe-----CCCCCceEEEEeeCCCc-cEEEEeCCCCccEEEEEEcc
Q 019349 97 ILAVRLNKKRLVI--VLREKTYIYDANT-LAILDTID-----TVPNLKGLCAFSPSLNA-CFLAVPASTTKGSVLVYNVM 167 (342)
Q Consensus 97 v~~i~~~~~~~~~--~~d~~i~i~d~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~l~~~~~~~~g~i~iwd~~ 167 (342)
|.+++|+++...+ +.|+.|++||+.+ .+.+..+. ...+...+.+++++|++ .++++++ .||.|++||++
T Consensus 180 v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS--SKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE--TTSCEEEEETT
T ss_pred eEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe--CCCeEEEEECc
Confidence 9999998875333 3388999999984 44444331 12234467888888887 7888887 68999999999
Q ss_pred CCce----eEEEecccC------------CeeEEEECCCCCEEEEEeCCCcEEEEEEcCC-CeeEEEeccCcCce-----
Q 019349 168 ELHS----HCEIDAHQA------------PLAAIVLSSNGMYIATASEQGTIIRVFLVSE-ATKSYSFRRGTYPS----- 225 (342)
Q Consensus 168 ~~~~----~~~~~~h~~------------~v~~i~~s~dg~~lat~s~dg~~irlwd~~~-~~~~~~~~~~~~~~----- 225 (342)
+++. +..+..|.. +|++++|+|+|++|++++. |+ |++||+++ ++.+..+..+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEESCGGGTTTHHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeeccccccccccc
Confidence 9886 788888876 8999999999999999998 86 68999997 77777665432100
Q ss_pred --------eEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 226 --------TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 226 --------~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.+..++|+|+++ +|++++.||+|+|||+++.+.
T Consensus 336 ~~~~~~i~~~~~~~~s~~~~---~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSDS---VVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHTSGGGCCCCEEECTTSS---EEEEECSTTEEEEEETTTCCE
T ss_pred cccccccccceEEEECCCCC---EEEEeccCCEEEEEEcCCCcc
Confidence 133489999999 999999999999999987653
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=260.01 Aligned_cols=299 Identities=12% Similarity=0.049 Sum_probs=205.6
Q ss_pred CCCeEEEEEcCCC---------CEEEEEc-------------------CCc-EEEEeCCCCcEE------EEEeeCCEEE
Q 019349 7 SYPVFFVSFNQDN---------SGFALST-------------------KDG-FKIFDSSTGRLC------YERAVGAFSI 51 (342)
Q Consensus 7 ~~~V~~l~fs~d~---------~~la~g~-------------------~~g-~~v~d~~~~~~~------~~~~~~~~~~ 51 (342)
.+.|.+++|+|++ ++||+|+ .|+ ++|||+++++.. ...+.+.+..
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~ 212 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD 212 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence 4678888888876 6677654 444 699999877532 2233466777
Q ss_pred EEEcCC------CCeEEEEcCCCCCCCCCCeEEEEECCCCcEE-----------EEEe-cCCceEEEEEcCCeEEEEE--
Q 019349 52 VEMLYS------SSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL-----------RELN-FLTSILAVRLNKKRLVIVL-- 111 (342)
Q Consensus 52 ~~~~~~------~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~-----------~~~~-~~~~v~~i~~~~~~~~~~~-- 111 (342)
+.+.+. .+.++.++. |++|++||+.+++.. ..+. +...|.+++|+++..++++
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~-------DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~ 285 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQ-------EGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFK 285 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEET-------TSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEET
T ss_pred EEECCCCCCCCCCceEEEEec-------CCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeC
Confidence 888775 346665554 899999999876421 2333 3458999999876544443
Q ss_pred CCeEEEEECCCCc-eeeEEeCCCCCceEEEE--eeCCCc-cEEEEeCCCCccEEEEEEccCCceeEEEecccC--CeeEE
Q 019349 112 REKTYIYDANTLA-ILDTIDTVPNLKGLCAF--SPSLNA-CFLAVPASTTKGSVLVYNVMELHSHCEIDAHQA--PLAAI 185 (342)
Q Consensus 112 d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~-~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~--~v~~i 185 (342)
|++|++||+++++ ....+..|... +.++ ++++++ .+||+++ .||+|+|||+++++++.++.+|.. .|.++
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~--V~sv~~~~s~~g~~~laS~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSY--ILSVSTAYSDFEDTVVSTVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSC--EEEEEEECCTTSCCEEEEEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred CCEEEEEECCCCCCceEEeeccccc--EEEEEEEcCCCCCeEEEEec--cCCeEEEEECCCCCcccccccccccCcccce
Confidence 8999999998764 44456666554 5544 566776 7888888 689999999999888878888764 58999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCC
Q 019349 186 VLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRG 265 (342)
Q Consensus 186 ~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~ 265 (342)
+|+|+++.|++++.|++ ||+||++++..+..+.. +...|++|+|||+++ +|++|+.||+|++||+.... ....
T Consensus 362 ~fsp~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~---~l~Sgs~Dgtv~lwd~~~~~-~~~~ 434 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASS-LRAVPSRAAFAVHPLVS--RETTITAIGVSRLHP---MVLAGSADGSLIITNAARRL-LHGI 434 (524)
T ss_dssp EEETTTTEEEEECSSSE-EEEEETTCTTCCEEEEE--CSSCEEEEECCSSCC---BCEEEETTTEEECCBSCSST-TTCC
T ss_pred EeCCCcCeEEEeCCCCc-EEEEECcccccceeeec--CCCceEEEEeCCCCC---eEEEEECCCEEEEEechHhh-cccc
Confidence 99999999999999987 69999999988777754 356799999999999 99999999999999986532 1111
Q ss_pred CCcc-----ccc--cccccccc-cc------c--cc--------ccccceeeeccCCCcccc---EEEEEEeCCcEEEEE
Q 019349 266 GRTS-----SIL--GSILPESV-NE------V--LD--------PADHHVLRNAFPAGVKRA---SVSVITYNGYFVEYI 318 (342)
Q Consensus 266 ~~~~-----~~~--~~~~~~~~-~~------~--~~--------~~~~~~~~~~~~~~~~~~---~l~~~~~dg~v~~~~ 318 (342)
.... ..+ -.+.|..- .. + |. ..+|...+..+++.|+++ .|++++.||.|++|+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 1000 000 01111110 00 1 11 112233445566777643 788888899999999
Q ss_pred EecCC
Q 019349 319 FSINN 323 (342)
Q Consensus 319 ~~~~~ 323 (342)
++-++
T Consensus 515 l~~~~ 519 (524)
T 2j04_B 515 LSLEH 519 (524)
T ss_dssp CSCC-
T ss_pred ccccc
Confidence 87654
No 47
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-31 Score=251.76 Aligned_cols=273 Identities=13% Similarity=0.136 Sum_probs=209.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
+.+..+|.+++|+||++.|++++.++ +++||.+. +.... .+...+..+.+.++.+.++..+. |++|++|
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~-------d~~i~~w 330 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDGQTIASASD-------DKTVKLW 330 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEEEE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cEEEEEecCCCCeEEEEECCCCCEEEEEeC-------CCeEEEE
Confidence 45778999999999999999998876 69999754 43333 34466777778777788877664 8999999
Q ss_pred ECCCCcEEEEEecCCceEEEEEcCCeEEE--EE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC
Q 019349 81 NTTTGTALRELNFLTSILAVRLNKKRLVI--VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (342)
Q Consensus 81 d~~~~~~~~~~~~~~~v~~i~~~~~~~~~--~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (342)
|...........+...+.+++++++...+ +. ++.+++||. +++.+..+..+.. .+.+++++|++.+|++++ .
T Consensus 331 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~--~v~~~~~s~dg~~l~~~~--~ 405 (577)
T 2ymu_A 331 NRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS--SVRGVAFSPDGQTIASAS--D 405 (577)
T ss_dssp ETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSS--CEEEEEECTTSSCEEEEE--T
T ss_pred eCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCC--CeEEEEECCCCCEEEEEe--C
Confidence 98655433333355689999999875433 33 789999995 5667777766544 567778888899999888 6
Q ss_pred ccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCC
Q 019349 158 KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 237 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~ 237 (342)
|+.|++||. +++.+..+.+|..+|++++|+||+++|++++.|++ |++||. +++.+..+.. +...|.+++|+||++
T Consensus 406 d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~-~~~~~~~~~~--~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 406 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQ 480 (577)
T ss_dssp TSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECTTSC
T ss_pred CCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEEC-CCCEEEEEcC--CCCCEEEEEEcCCCC
Confidence 899999995 56788889999999999999999999999999997 589996 5677777754 355799999999999
Q ss_pred cccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEE
Q 019349 238 FQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEY 317 (342)
Q Consensus 238 ~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~ 317 (342)
+|++++.|++|++||... +..+. +. .|...+..+.+.+++.+|++++.||.|++|
T Consensus 481 ---~las~~~d~~i~iw~~~~-~~~~~-------~~--------------~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 481 ---TIASASDDKTVKLWNRNG-QLLQT-------LT--------------GHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp ---EEEEEETTSEEEEEETTS-CEEEE-------EE--------------CCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ---EEEEEeCCCEEEEEcCCC-CEEEE-------Ee--------------CCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 999999999999999542 21110 11 111122334445566899999999999999
Q ss_pred EE
Q 019349 318 IF 319 (342)
Q Consensus 318 ~~ 319 (342)
+.
T Consensus 536 d~ 537 (577)
T 2ymu_A 536 NR 537 (577)
T ss_dssp CT
T ss_pred eC
Confidence 74
No 48
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.1e-31 Score=240.54 Aligned_cols=276 Identities=11% Similarity=0.100 Sum_probs=211.1
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEe---eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 10 VFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA---VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
+.+++|++ +.+++++.+..+++||+.+++...... ...+..+.+.++++.+++.+. |+.|++||+.+++
T Consensus 96 ~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~-------dg~i~iwd~~~~~ 167 (401)
T 4aez_A 96 LNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG-------NGLVDIYDVESQT 167 (401)
T ss_dssp CBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET-------TSCEEEEETTTCC
T ss_pred EEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC-------CCeEEEEECcCCe
Confidence 45578876 345555555568999999997654433 356788888888888877664 8999999999999
Q ss_pred EEEEEe-cCCceEEEEEcCCeEEEEE-CCeEEEEECCC-CceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEE
Q 019349 87 ALRELN-FLTSILAVRLNKKRLVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLV 163 (342)
Q Consensus 87 ~~~~~~-~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~i 163 (342)
.+..+. +...|.++.++++.++.++ |+.|++||++. ...+..+..+. ..+.+++++|++.++++++ .||.|++
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~--~d~~v~i 243 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHS--SEVCGLAWRSDGLQLASGG--NDNVVQI 243 (401)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS--SCEEEEEECTTSSEEEEEE--TTSCEEE
T ss_pred EEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCC--CCeeEEEEcCCCCEEEEEe--CCCeEEE
Confidence 988875 4558999999988888777 88999999984 55666666544 4677888888899999988 6899999
Q ss_pred EEccCCceeEEEecccCCeeEEEECCCC-CEEEEEe--CCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCccc
Q 019349 164 YNVMELHSHCEIDAHQAPLAAIVLSSNG-MYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 240 (342)
Q Consensus 164 wd~~~~~~~~~~~~h~~~v~~i~~s~dg-~~lat~s--~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~ 240 (342)
||+++++++..+..|..+|.+++|+|++ .++++++ .||. |++||+.+++.+..+.. ...|.+++|+|+++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~--- 316 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVDA---GSQVTSLIWSPHSK--- 316 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEEC---SSCEEEEEECSSSS---
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEeC---CCcEEEEEECCCCC---
Confidence 9999999999999999999999999976 5666665 6887 58999999998888742 34699999999999
Q ss_pred EEEEE--eCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEE
Q 019349 241 ILVAT--SSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 318 (342)
Q Consensus 241 ~l~~~--s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~ 318 (342)
+|+++ +.||.|++||++........ .+..+........|+ +++..|++++.||.|++|+
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~-----~~~~h~~~v~~~~~s--------------~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQV-----DIPAHDTRVLYSALS--------------PDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEE-----EEECCSSCCCEEEEC--------------TTSSEEEEECTTSEEEEEE
T ss_pred eEEEEeecCCCcEEEEecCCccceeEE-----EecCCCCCEEEEEEC--------------CCCCEEEEEeCCCcEEEEE
Confidence 88884 48999999998764322110 011111111122344 4448999999999999999
Q ss_pred EecCC
Q 019349 319 FSINN 323 (342)
Q Consensus 319 ~~~~~ 323 (342)
+...+
T Consensus 378 ~~~~~ 382 (401)
T 4aez_A 378 VYDGD 382 (401)
T ss_dssp CCC--
T ss_pred CCCCc
Confidence 86544
No 49
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-30 Score=230.00 Aligned_cols=274 Identities=9% Similarity=0.061 Sum_probs=209.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|..+|++++| |++++|++|+.++ +++||+.+++.... .+...+..+.+.++.+.++..+. ++.|++|
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------dg~i~~~ 86 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK-------DTMINGV 86 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET-------TSCEEEE
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecC-------CCeEEEE
Confidence 468899999999 9999999999888 69999988865543 34567888888888888887764 8999999
Q ss_pred ECCCC---cEEEEEe-cCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCC-CccEEEEeC
Q 019349 81 NTTTG---TALRELN-FLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-NACFLAVPA 154 (342)
Q Consensus 81 d~~~~---~~~~~~~-~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 154 (342)
|+... +.+..+. +...|.++.++++.+++++ |+.|++|| .++.+..+..+..+ +.++...+ ++..+++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNAS--VWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSC--EEEEEEEETTTTEEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCc--eeEEEEccCCCCEEEEEE
Confidence 98654 4444544 4568999999888877777 88999999 66677777766554 44444333 566888877
Q ss_pred CCCccEEEEEEccCCceeEEEec-ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 155 STTKGSVLVYNVMELHSHCEIDA-HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~~~~-h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
.+|.|++|| ..+....+.. |..+|.+++|+|++. |++++.||. |++||+++++.+..+..+ ...|.+++|+
T Consensus 163 --~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~~--~~~i~~~~~~ 234 (313)
T 3odt_A 163 --ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEGH--ESFVYCIKLL 234 (313)
T ss_dssp --TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEECC--SSCEEEEEEC
T ss_pred --CCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhcC--CceEEEEEEe
Confidence 589999999 4556677776 999999999999988 999999997 589999999998888643 5579999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCc
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 313 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 313 (342)
|++. |++++.||+|++||+++.+..... ...........|++ ++ .+++++.||.
T Consensus 235 ~~~~----l~~~~~dg~v~iwd~~~~~~~~~~-------~~~~~~i~~~~~~~--------------~~-~~~~~~~dg~ 288 (313)
T 3odt_A 235 PNGD----IVSCGEDRTVRIWSKENGSLKQVI-------TLPAISIWSVDCMS--------------NG-DIIVGSSDNL 288 (313)
T ss_dssp TTSC----EEEEETTSEEEEECTTTCCEEEEE-------ECSSSCEEEEEECT--------------TS-CEEEEETTSC
T ss_pred cCCC----EEEEecCCEEEEEECCCCceeEEE-------eccCceEEEEEEcc--------------CC-CEEEEeCCCc
Confidence 9985 889999999999999876543211 11111111223333 32 3888999999
Q ss_pred EEEEEEecCC
Q 019349 314 FVEYIFSINN 323 (342)
Q Consensus 314 v~~~~~~~~~ 323 (342)
|++|++...+
T Consensus 289 i~iw~~~~~~ 298 (313)
T 3odt_A 289 VRIFSQEKSR 298 (313)
T ss_dssp EEEEESCGGG
T ss_pred EEEEeCCCCc
Confidence 9999987644
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.4e-31 Score=235.79 Aligned_cols=245 Identities=13% Similarity=0.142 Sum_probs=184.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcE--EEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRL--CYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
..+...|.+++|+|++++|++|+.|+ +++|++.++.. ... .+...+..+.+.++++.++.++. |++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~-------D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-------DKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC-------CCeEE
Confidence 46788999999999999999998877 69999887643 222 34467888888888888887765 89999
Q ss_pred EEECCCCcE---EEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCcee--eEEeCCCCCceEEEEeeCCCccE
Q 019349 79 LFNTTTGTA---LRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAIL--DTIDTVPNLKGLCAFSPSLNACF 149 (342)
Q Consensus 79 iwd~~~~~~---~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
+||+.++.. +..+. +...|.+++|+|+. ++.++ |+.|++||+.+++.. ..+..| ...+.+++++|++.+
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h--~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH--ESTVWSLAFDPSGQR 208 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC--SSCEEEEEECTTSSE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC--CCceEEEEECCCCCE
Confidence 999987643 33333 34589999998875 44444 889999999877533 445444 446788888899999
Q ss_pred EEEeCCCCccEEEEEEccCC---------------ceeEEEec-ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe
Q 019349 150 LAVPASTTKGSVLVYNVMEL---------------HSHCEIDA-HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT 213 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~---------------~~~~~~~~-h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~ 213 (342)
|++++ .||+|++||.... +++.++.+ |...|.+++|+|++..|++++.|++ |++|+...+.
T Consensus 209 l~s~s--~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~ 285 (345)
T 3fm0_A 209 LASCS--DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNS 285 (345)
T ss_dssp EEEEE--TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTS
T ss_pred EEEEe--CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCC
Confidence 99988 6899999997432 23344554 8899999999999999999999998 5999987653
Q ss_pred e--------EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCC
Q 019349 214 K--------SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQR 263 (342)
Q Consensus 214 ~--------~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 263 (342)
. ..... ..+...|++++|+|++. .+||+++.||+|++|+++..+++.
T Consensus 286 ~~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~--~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 286 DPQQPTFSLTAHLH-QAHSQDVNCVAWNPKEP--GLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp CTTSCCEEEEEEET-TSSSSCEEEEEECSSST--TEEEEEETTSCEEEEEECC-----
T ss_pred CcceeeEEEEeeec-ccccCcEeEeEEeCCCc--eEEEEcCCCCcEEEEEecCCCCcc
Confidence 1 11111 12456799999999973 289999999999999998876543
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-31 Score=238.49 Aligned_cols=274 Identities=12% Similarity=0.078 Sum_probs=207.2
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEE--EEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCY--ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
..+|.+++|+|||+.++++..++ +.+|+........ ..+...+..+.+.+++..++..+ ++.|++||+.
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--------dg~i~iw~~~ 80 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG--------KGCVKVWDIS 80 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC--------BSEEEEEETT
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC--------CCeEEEEECC
Confidence 45789999999999998877655 4555544432222 23446677788887777776653 6899999998
Q ss_pred CCcE---EEEE---ecCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCc--eeeEEeCCCCCceEEEEeeCCCccEEEE
Q 019349 84 TGTA---LREL---NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLA--ILDTIDTVPNLKGLCAFSPSLNACFLAV 152 (342)
Q Consensus 84 ~~~~---~~~~---~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 152 (342)
+++. +..+ .+...|.+++++++. ++++. ++.|++||+.+++ ....+..+ ...+.+++++|++.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS--APACYALAISPDSKVCFS 158 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS--SSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC--CCceEEEEECCCCCEEEE
Confidence 7653 2333 345689999999875 44444 7899999999876 44444443 345777888888889998
Q ss_pred eCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEE
Q 019349 153 PASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 232 (342)
Q Consensus 153 ~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~f 232 (342)
++ .+|.|++||+++++.+..+..|..+|.+++|+|++++|++++.||. |++||+++++.+..+. ....+.+++|
T Consensus 159 ~~--~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~---~~~~v~~~~~ 232 (337)
T 1gxr_A 159 CC--SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT-VRSWDLREGRQLQQHD---FTSQIFSLGY 232 (337)
T ss_dssp EE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEE---CSSCEEEEEE
T ss_pred Ee--CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc-EEEEECCCCceEeeec---CCCceEEEEE
Confidence 87 5899999999999999999999999999999999999999999997 5899999999887764 2456999999
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCC
Q 019349 233 GQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNG 312 (342)
Q Consensus 233 s~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 312 (342)
+|+++ +|++++.++.|++||++...... +..+........|+ ++++.|++++.||
T Consensus 233 s~~~~---~l~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~v~~~~~~--------------~~~~~l~~~~~dg 287 (337)
T 1gxr_A 233 CPTGE---WLAVGMESSNVEVLHVNKPDKYQ--------LHLHESCVLSLKFA--------------YCGKWFVSTGKDN 287 (337)
T ss_dssp CTTSS---EEEEEETTSCEEEEETTSSCEEE--------ECCCSSCEEEEEEC--------------TTSSEEEEEETTS
T ss_pred CCCCC---EEEEEcCCCcEEEEECCCCCeEE--------EcCCccceeEEEEC--------------CCCCEEEEecCCC
Confidence 99999 99999999999999998754311 11111111122333 4447899999999
Q ss_pred cEEEEEEec
Q 019349 313 YFVEYIFSI 321 (342)
Q Consensus 313 ~v~~~~~~~ 321 (342)
.+++|++..
T Consensus 288 ~i~~~~~~~ 296 (337)
T 1gxr_A 288 LLNAWRTPY 296 (337)
T ss_dssp EEEEEETTT
T ss_pred cEEEEECCC
Confidence 999998654
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-33 Score=252.43 Aligned_cols=234 Identities=12% Similarity=0.123 Sum_probs=175.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC--cEEEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
...+|++++|+|++++|++|+.++ +++||+.++ +.... .+...+..+.+.++++.++.++. |++|++|
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------d~~v~vw 82 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ-------DRNAYVY 82 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET-------TSSEEEC
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC-------CCeEEEE
Confidence 457899999999999999997776 699999887 33322 34567888888888888887764 8999999
Q ss_pred ECCCCc---EEEEE-ecCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCc---eeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 81 NTTTGT---ALREL-NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLA---ILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 81 d~~~~~---~~~~~-~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
|+.+++ ....+ .+...|.+++|+++. ++.++ |+.|++||+.+++ ....+.. .+...+.+++++|++.++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSSEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCCEE
Confidence 999877 34433 456689999998764 44444 8899999998876 3556654 134567888888999999
Q ss_pred EEeCCCCccEEEEEEcc------------------CCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 019349 151 AVPASTTKGSVLVYNVM------------------ELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~------------------~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~ 212 (342)
++++ .||.|++||+. .++++..+ +|..+|++++|+|+|++|++++.||+ |++||+.++
T Consensus 162 ~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~~~ 237 (377)
T 3dwl_C 162 AAGC--ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPSAP 237 (377)
T ss_dssp EEEE--SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEECST
T ss_pred EEEe--CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEECCCC
Confidence 9988 58999999985 24455666 89999999999999999999999997 589999998
Q ss_pred ee----EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 213 TK----SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 213 ~~----~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+. +..+.. +...|.+++|+|+++ +|++++.++.+ +|+..
T Consensus 238 ~~~~~~~~~~~~--~~~~v~~~~~s~~~~---~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 238 EQPPRALITVKL--SQLPLRSLLWANESA---IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TSCEEECCCEEC--SSSCEEEEEEEETTE---EEEEESSSSEE-EECCC
T ss_pred CCcceeeEeecC--CCCceEEEEEcCCCC---EEEEEcCCcEE-EEEeC
Confidence 76 555543 345699999999998 88888766666 77665
No 53
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.2e-31 Score=240.68 Aligned_cols=283 Identities=11% Similarity=0.097 Sum_probs=207.3
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCCCcEEEE---------------EeeCCEEEEEEcC-CCCeEEEEc
Q 019349 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYE---------------RAVGAFSIVEMLY-SSSLLAIVG 65 (342)
Q Consensus 4 ~~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~~~~~~~---------------~~~~~~~~~~~~~-~~~~~~~~~ 65 (342)
..|..+|++++|+| ++++|++|+.++ +++||+.+++.... .+...+..+.+.+ +.+.++.++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 45889999999999 999999998887 79999988743211 1456777788877 555666665
Q ss_pred CCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCC-----eEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEE
Q 019349 66 AGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKK-----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLC 139 (342)
Q Consensus 66 ~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~-----~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (342)
. |+.|++||+.+++.+..+.+...+.++.+.+. .++++. ++.|++||+.+++.+..+..+.. .+.
T Consensus 120 ~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~v~ 190 (408)
T 4a11_B 120 F-------DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ--EIL 190 (408)
T ss_dssp T-------TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS--CEE
T ss_pred C-------CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC--cEE
Confidence 3 89999999999999999998889999998763 344444 78999999999988888865544 577
Q ss_pred EEeeCCCcc-EEEEeCCCCccEEEEEEccCCc-eeEEE---------------ecccCCeeEEEECCCCCEEEEEeCCCc
Q 019349 140 AFSPSLNAC-FLAVPASTTKGSVLVYNVMELH-SHCEI---------------DAHQAPLAAIVLSSNGMYIATASEQGT 202 (342)
Q Consensus 140 ~~~~~~~~~-~l~~~~~~~~g~i~iwd~~~~~-~~~~~---------------~~h~~~v~~i~~s~dg~~lat~s~dg~ 202 (342)
+++++|++. ++++++ .||.|++||++++. ++..+ ..|..+|++++|+|+|++|++++.||.
T Consensus 191 ~~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 191 AVSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 777888877 466766 68999999998765 33444 578999999999999999999999998
Q ss_pred EEEEEEcCCCeeEEEeccCcCc----eeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccc
Q 019349 203 IIRVFLVSEATKSYSFRRGTYP----STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPE 278 (342)
Q Consensus 203 ~irlwd~~~~~~~~~~~~~~~~----~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 278 (342)
|++||+.+++....+...... ........ ..+. .+++++.++.|++||+.+.+.... +.++..
T Consensus 269 -i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~i~v~d~~~~~~~~~-------~~~~~~- 335 (408)
T 4a11_B 269 -MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSC-GCSS---EFVFVPYGSTIAVYTVYSGEQITM-------LKGHYK- 335 (408)
T ss_dssp -EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECC-SSSS---CEEEEEETTEEEEEETTTCCEEEE-------ECCCSS-
T ss_pred -EEEEECCCCccceeccccccccccccceeEEec-CCCc---eEEEEecCCEEEEEECcCCcceee-------eccCCC-
Confidence 589999998765443221111 11122222 2233 678888899999999987654321 111111
Q ss_pred cccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecCC
Q 019349 279 SVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~~ 323 (342)
.+..+.+.+++..|++++.||.|++|+++..+
T Consensus 336 -------------~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 336 -------------TVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp -------------CEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred -------------eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 11222334445889999999999999987654
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-30 Score=239.40 Aligned_cols=279 Identities=16% Similarity=0.172 Sum_probs=209.8
Q ss_pred CCCCeEEEEEcCCCC-EEEEEcCCc-EEEEeC----CCCc------EEEEE------------eeCCEEEEEEcCCCCeE
Q 019349 6 SSYPVFFVSFNQDNS-GFALSTKDG-FKIFDS----STGR------LCYER------------AVGAFSIVEMLYSSSLL 61 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~-~la~g~~~g-~~v~d~----~~~~------~~~~~------------~~~~~~~~~~~~~~~~~ 61 (342)
+..+|++++|+|+++ +|++|+.++ +++||+ .+++ ..... +...+..+.+.++++.+
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 347899999999999 999998877 699999 8877 23222 12367788888888888
Q ss_pred EEEcCCCCCCCCCCeEEEEECCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCce
Q 019349 62 AIVGAGEQPSLSPRRLCLFNTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKG 137 (342)
Q Consensus 62 ~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~ 137 (342)
++.+. ++.|++|| .+++.+..+. +...|.+++|+++. ++++. |+.|++||+.+++.+..+..+.....
T Consensus 124 ~~~~~-------dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 124 VTGVE-------NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp EEEET-------TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EEEeC-------CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 77764 89999999 6777777776 45689999998765 44444 88999999999988888866544311
Q ss_pred -------------EEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEE
Q 019349 138 -------------LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTII 204 (342)
Q Consensus 138 -------------~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~i 204 (342)
+.++++.+++ .+++++ .+|.|++||+.+++.+..+..|..+|.+++|+|++++|++++.||. |
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i 271 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDD-KFVIPG--PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT-L 271 (425)
T ss_dssp ----------CCCBSCCEEEETT-EEEEEC--GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC-E
T ss_pred ceeeccccCCcceeeEEEEcCCC-EEEEEc--CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE-E
Confidence 3444445554 455665 5899999999999999999999999999999999999999999998 5
Q ss_pred EEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccc
Q 019349 205 RVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVL 284 (342)
Q Consensus 205 rlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
++||+++++.+..+.. +...|.+++|+|++ +|++++.|+.|++||++..+.... +.....
T Consensus 272 ~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~-------~~~~~~------- 331 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYG--HSQSIVSASWVGDD----KVISCSMDGSVRLWSLKQNTLLAL-------SIVDGV------- 331 (425)
T ss_dssp EEECSSSBSCSEEECC--CSSCEEEEEEETTT----EEEEEETTSEEEEEETTTTEEEEE-------EECTTC-------
T ss_pred EEEECCCCccceEecC--CCccEEEEEECCCC----EEEEEeCCCcEEEEECCCCcEeEe-------cccCCc-------
Confidence 8999999988888753 35569999999988 699999999999999987653221 000001
Q ss_pred cccccceeeeccCCCccccEEEEEEeCCcEEEEEEecCC
Q 019349 285 DPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~~ 323 (342)
.+..+.+.++++.|++++.||.|++|++...+
T Consensus 332 -------~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 332 -------PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp -------CEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred -------cEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 11122334445899999999999999987543
No 55
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.6e-30 Score=237.72 Aligned_cols=275 Identities=13% Similarity=0.118 Sum_probs=212.9
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEE--ee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER--AV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
.++.|+||++ +.||+|.++.++|||..+++..... +. ..|..+++.++++++++.+. |++|++||+.+
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~-------Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-------SAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-------TSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC-------CCeEEEEEcCC
Confidence 4677999976 5899999888999999999765433 22 45888888888888887664 89999999999
Q ss_pred CcEEEEEec-CCceEEEEEcCCeEEEEE-CCeEEEEECCCC-ceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEE
Q 019349 85 GTALRELNF-LTSILAVRLNKKRLVIVL-REKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSV 161 (342)
Q Consensus 85 ~~~~~~~~~-~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i 161 (342)
++++..+.. ...+.++.+++..++.++ |+.+++||.... ..+..+..+.. .++.+...+++.++++++ .||.|
T Consensus 179 ~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--~~~~~~~~~~g~~l~s~~--~D~~v 254 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--EVCGLRWAPDGRHLASGG--NDNLV 254 (420)
T ss_dssp TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEEEE--TTSCE
T ss_pred CcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc--ceeeeeecCCCCeeeeee--ccccc
Confidence 999988764 458999999988887777 889999999865 44556655444 567777888888999888 68999
Q ss_pred EEEEccCCc----eeEEEecccCCeeEEEECCCC-CEEEEE--eCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEec
Q 019349 162 LVYNVMELH----SHCEIDAHQAPLAAIVLSSNG-MYIATA--SEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 234 (342)
Q Consensus 162 ~iwd~~~~~----~~~~~~~h~~~v~~i~~s~dg-~~lat~--s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~ 234 (342)
++||..+++ .+.....|..+|.+++|+|++ .+++++ +.|++ |++||+.+++.+..+.. ...+.++.|+|
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~---~~~v~~~~~~~ 330 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDA---HSQVCSILWSP 330 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEET
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeecc---ccceeeeeecC
Confidence 999998765 356677899999999999965 556654 57887 69999999999888753 34588999999
Q ss_pred CCCcccEEEEEe--CCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCC
Q 019349 235 SMQFQDILVATS--SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNG 312 (342)
Q Consensus 235 d~~~~~~l~~~s--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 312 (342)
++. .|++++ .|++|+|||+.+.+.... +.+ |...+..+.+.+++.+|++++.||
T Consensus 331 ~~~---~lv~~sg~~d~~I~iwd~~~~~~v~~-------l~g--------------H~~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 331 HYK---ELISGHGFAQNQLVIWKYPTMAKVAE-------LKG--------------HTSRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp TTT---EEEEEECTTTCCEEEEETTTCCEEEE-------ECC--------------CSSCEEEEEECTTSSCEEEEETTT
T ss_pred CCC---eEEEEEecCCCEEEEEECCCCcEEEE-------EcC--------------CCCCEEEEEEcCCCCEEEEEecCC
Confidence 998 777765 789999999987654321 111 122223334455558999999999
Q ss_pred cEEEEEEecCC
Q 019349 313 YFVEYIFSINN 323 (342)
Q Consensus 313 ~v~~~~~~~~~ 323 (342)
+|++|++....
T Consensus 387 tvriWdv~~~~ 397 (420)
T 4gga_A 387 TLRLWRCFELD 397 (420)
T ss_dssp EEEEECCSCSS
T ss_pred eEEEEECCCCC
Confidence 99999986543
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-31 Score=243.98 Aligned_cols=241 Identities=13% Similarity=0.120 Sum_probs=186.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc---------EEEEEeeCCEEEEEEcCCCC-eEEEEcCCCCCCCC
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR---------LCYERAVGAFSIVEMLYSSS-LLAIVGAGEQPSLS 73 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 73 (342)
.+...|.+++|+|+|++|++|+.|+ +++||+.+.. ..+..|.+.+..+.+.+... .++.++ .
T Consensus 106 ~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s-------~ 178 (380)
T 3iz6_a 106 LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS-------G 178 (380)
T ss_dssp CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC-------T
T ss_pred cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC-------C
Confidence 4667899999999999999998887 5999986531 11223334444445554433 455444 4
Q ss_pred CCeEEEEECCCCcEEEEEe------cCCceEEEEEcC---CeEEEEE-CCeEEEEECC-CCceeeEEeCCCCCceEEEEe
Q 019349 74 PRRLCLFNTTTGTALRELN------FLTSILAVRLNK---KRLVIVL-REKTYIYDAN-TLAILDTIDTVPNLKGLCAFS 142 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~------~~~~v~~i~~~~---~~~~~~~-d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~ 142 (342)
|++|++||+.+++.+..+. +...|.++.+++ +.++.++ |++|++||++ ..+.+..+..|.. .+.+++
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~--~v~~v~ 256 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG--DINSVK 256 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS--CCCEEE
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC--CeEEEE
Confidence 9999999999999887763 345799999965 3344444 8999999997 4466777765544 466677
Q ss_pred eCCCccEEEEeCCCCccEEEEEEccCCceeEEEeccc-------CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeE
Q 019349 143 PSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQ-------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKS 215 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~-------~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~ 215 (342)
++|++.++++++ .||+|++||+++++++..+..|. ..|++++|+|+|++|++|+.||. |++||+.+++.+
T Consensus 257 ~~p~~~~l~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~~ 333 (380)
T 3iz6_a 257 FFPDGQRFGTGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLAEMV 333 (380)
T ss_dssp ECTTSSEEEEEC--SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTCCEE
T ss_pred EecCCCeEEEEc--CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCCceE
Confidence 778888999988 68999999999999888776543 24899999999999999999998 589999999887
Q ss_pred EEecc--CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 216 YSFRR--GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 216 ~~~~~--~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
..+.. ..+...|.+++|+||+. +|++|+.|++|+||++...+
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~---~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGS---ALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSS---EEEEECTTSCEEEEECCSSS
T ss_pred EEEecccCCCCCceEEEEECCCCC---EEEEeeCCCCEEEEecCCCc
Confidence 77632 23456799999999999 99999999999999987654
No 57
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-31 Score=234.14 Aligned_cols=237 Identities=13% Similarity=0.105 Sum_probs=172.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC-------cEE--EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG-------RLC--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (342)
+..+|++++|+|++++|++|+.|+ +++||+... +.+ +..|...+..+.+.+++++++.++. |+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~-------D~ 129 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR-------DK 129 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET-------TS
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC-------CC
Confidence 788999999999999999998877 699998532 222 2334567888888888888877764 89
Q ss_pred eEEEEECCCC----cEEEEEe-cCCceEEEEEcCCeE--EEEE-CCeEEEEECCCC--ceeeEEeCCCCCceEEEEeeCC
Q 019349 76 RLCLFNTTTG----TALRELN-FLTSILAVRLNKKRL--VIVL-REKTYIYDANTL--AILDTIDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 76 ~i~iwd~~~~----~~~~~~~-~~~~v~~i~~~~~~~--~~~~-d~~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 145 (342)
+|++||+... +++..+. +...|.+++|+|+.. +.++ |++|++||..++ +++..+..|.. .+.+++++|
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~--~v~~~~~~~ 207 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG--TVWSSDFDK 207 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECC
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC--cEEEEEecC
Confidence 9999999432 3455554 456899999998753 3344 889999998766 56667765554 455566666
Q ss_pred C--ccEEEEeCCCCccEEEEEEccCC--------ceeEEEec-ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe-
Q 019349 146 N--ACFLAVPASTTKGSVLVYNVMEL--------HSHCEIDA-HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT- 213 (342)
Q Consensus 146 ~--~~~l~~~~~~~~g~i~iwd~~~~--------~~~~~~~~-h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~- 213 (342)
+ +..|++++ .|++|++||+..+ .+...+.. |..+|.+++|++++ +|++++.||+ |++||..+++
T Consensus 208 ~~~~~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~ 283 (330)
T 2hes_X 208 TEGVFRLCSGS--DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEW 283 (330)
T ss_dssp SSSSCEEEEEE--TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEE
T ss_pred CCCeeEEEEEe--CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCce
Confidence 5 66888887 6899999998764 34445554 99999999999765 8999999998 5899998874
Q ss_pred -eEEEeccCcCceeEEEEEEec--CCCcccEEEEEeCCCcEEEEecCC
Q 019349 214 -KSYSFRRGTYPSTIFSLSFGQ--SMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 214 -~~~~~~~~~~~~~v~~l~fs~--d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
.+.....++....|.+++|+| +++ +||+++.||+|+|||++.
T Consensus 284 ~~~~~~~~~h~~~~v~~v~~~~~~~~~---~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 284 KVFAKRALCHGVYEINVVKWLELNGKT---ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEESCTTTTSCEEEEEEC-----C---CEEEEETTSEEEEEEC--
T ss_pred EEEeccccccccceEEEEEEecCCCce---EEEEecCCCcEEEEEecc
Confidence 333332222222699999999 677 899999999999999864
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-31 Score=236.87 Aligned_cols=244 Identities=12% Similarity=0.166 Sum_probs=188.8
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC--cEEEEE--eeCCEEEEEEcCC--CCeEEEEcCCCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYER--AVGAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~--~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (342)
...|..+|++++|+|++++|++|+.++ +++||+... +..... +...+..+.+.++ .+.++.++. |+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-------dg 79 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------DG 79 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------TS
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc-------CC
Confidence 346889999999999999999998777 799999743 443333 4466777777665 667776654 89
Q ss_pred eEEEEECCCCc--EEEEEe-cCCceEEEEEcCC----eEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCC--
Q 019349 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-- 145 (342)
Q Consensus 76 ~i~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-- 145 (342)
.|++||+.+++ .+..+. +...|.+++|+++ .+++++ |+.|++||+.+...........+...+.+++++|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 445554 4568999999876 344444 8899999998874433332233445677777777
Q ss_pred -----------CccEEEEeCCCCccEEEEEEccCCc----eeEEEecccCCeeEEEECCC---CCEEEEEeCCCcEEEEE
Q 019349 146 -----------NACFLAVPASTTKGSVLVYNVMELH----SHCEIDAHQAPLAAIVLSSN---GMYIATASEQGTIIRVF 207 (342)
Q Consensus 146 -----------~~~~l~~~~~~~~g~i~iwd~~~~~----~~~~~~~h~~~v~~i~~s~d---g~~lat~s~dg~~irlw 207 (342)
++.++++++ .||.|++||+++++ ....+.+|..+|++++|+|+ +++|++++.||. |++|
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~iw 236 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIW 236 (379)
T ss_dssp ----------CTTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEE
T ss_pred ccccccccCCCCCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EEEE
Confidence 578888887 58999999998765 44677889999999999999 899999999998 5899
Q ss_pred EcCCCe---eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 208 LVSEAT---KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 208 d~~~~~---~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
|+++++ ....+....+...|.+++|+|+++ +|++++.||.|++|+++..
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---CEEEEESSSSEEEEEEEET
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCC---EEEEecCCCcEEEEeCCCC
Confidence 999874 222332223456799999999999 9999999999999999753
No 59
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.4e-31 Score=238.05 Aligned_cols=238 Identities=15% Similarity=0.161 Sum_probs=174.3
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcE--E--EEEeeCCEEEEEEcCC--CCeEEEEcCCCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRL--C--YERAVGAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~--~--~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (342)
.+.|..+|++++|+|+|++||+|+.|+ ++|||+.+++. + +..|.+.+..+.+.+. ++.++.++. |+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~-------D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY-------DR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET-------TS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC-------CC
Confidence 457889999999999999999999887 69999987742 2 2334567777777653 567776654 89
Q ss_pred eEEEEECCCCc--EEEEEe-cCCceEEEEEcCC--e--EEEEE-CCeEEEEECCCCcee---eEEeCCCCCceEEEEeeC
Q 019349 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK--R--LVIVL-REKTYIYDANTLAIL---DTIDTVPNLKGLCAFSPS 144 (342)
Q Consensus 76 ~i~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~--~--~~~~~-d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (342)
+|++||+++++ .+..+. +...|.+++|+|+ . ++.++ |++|++||+...... ..+..+ ...+.+++++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h--~~~v~~~~~~ 159 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH--TIGCNAVSWA 159 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS--SSCBCCCEEC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc--cCCcceEEEc
Confidence 99999998874 444443 4568999999986 3 33333 889999999875322 222222 2334444444
Q ss_pred CC-----------------ccEEEEeCCCCccEEEEEEccCC---ceeEEEecccCCeeEEEECCCC----CEEEEEeCC
Q 019349 145 LN-----------------ACFLAVPASTTKGSVLVYNVMEL---HSHCEIDAHQAPLAAIVLSSNG----MYIATASEQ 200 (342)
Q Consensus 145 ~~-----------------~~~l~~~~~~~~g~i~iwd~~~~---~~~~~~~~h~~~v~~i~~s~dg----~~lat~s~d 200 (342)
|+ +.+|++++ .|++|++||++.. +++..+.+|..+|++++|+|++ ++||+||.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT
T ss_pred cccCCccccccccccCccccceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC
Confidence 44 35777777 6899999999755 4667788999999999999987 899999999
Q ss_pred CcEEEEEEcCCC---e-eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 201 GTIIRVFLVSEA---T-KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 201 g~~irlwd~~~~---~-~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
|+ |++||+.+. + ....+. .+...|.+++|+|+++ +||+++.|++|+||+..
T Consensus 238 ~~-v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~---~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 238 GR-VFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITAN---ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CE-EEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTC---CEEEEESSSCEEEEEEC
T ss_pred Ce-EEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCC---EEEEEcCCCeEEEEEEC
Confidence 98 589999763 1 111221 1245699999999999 99999999999999975
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.9e-30 Score=226.53 Aligned_cols=238 Identities=13% Similarity=0.174 Sum_probs=194.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..+..+|.+++|+|++++|++|+.++ +++||+.+++.+... +...+..+.+.++++.++.++. |++|++|
T Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------d~~i~iw 134 (312)
T 4ery_A 62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-------DESVRIW 134 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET-------TSCEEEE
T ss_pred ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-------CCcEEEE
Confidence 35778999999999999999998887 699999998776554 3456777788888888777664 8999999
Q ss_pred ECCCCcEEEEEec-CCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 81 NTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
|+++++++..+.. ..+|.++.++++. ++.++ |+.|++||+.+++.+..+... +...+..++++|++.++++++
T Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-- 211 (312)
T 4ery_A 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAAT-- 211 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEE--
T ss_pred ECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEc--
Confidence 9999999888764 4589999998864 34444 889999999999888776433 233566778888889999887
Q ss_pred CccEEEEEEccCCceeEEEecccCCeeE---EEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 157 TKGSVLVYNVMELHSHCEIDAHQAPLAA---IVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~~~~~h~~~v~~---i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
.||.|++||+.+++.+..+.+|...+.+ ....+++.+|++|+.||. |++||+.+++.+..+..+ ...|.+++|+
T Consensus 212 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~h--~~~v~~~~~~ 288 (312)
T 4ery_A 212 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQTKEIVQKLQGH--TDVVISTACH 288 (312)
T ss_dssp TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC-EEEEETTTCCEEEEECCC--SSCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE-EEEEECCCchhhhhhhcc--CCcEEEEeec
Confidence 6899999999999999999988765433 233468899999999998 589999999999888643 4569999999
Q ss_pred cCCCcccEEEEEe--CCCcEEEEecC
Q 019349 234 QSMQFQDILVATS--SSGSLHVFSPG 257 (342)
Q Consensus 234 ~d~~~~~~l~~~s--~dg~i~vwd~~ 257 (342)
|++. +|++++ .|++|++|+.+
T Consensus 289 p~~~---~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 289 PTEN---IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSSS---EEEEEECTTTCCEEEEECC
T ss_pred CcCC---ceEEEEccCCccEEEecCC
Confidence 9999 999987 69999999864
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.8e-31 Score=234.41 Aligned_cols=275 Identities=10% Similarity=0.062 Sum_probs=205.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc----EE-EEEeeCCEEEEEEcCCCC-eEEEEcCCCCCCCCCCe
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR----LC-YERAVGAFSIVEMLYSSS-LLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~----~~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~d~~ 76 (342)
..|...|++++|+|++++|++|+.++ +++|++.+++ .. ...+...+..+.+.++++ .+++.+. ++.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------dg~ 80 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV-------QGE 80 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET-------TSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC-------CCe
Confidence 46889999999999999999998877 6999998776 32 223446788888888888 6766654 899
Q ss_pred EEEEEC-CCCcEEEEEe--cCCceEEEEEcCC-eEEEEE-CCeEEEEECCC---------CceeeEEeCCCCCceEEEEe
Q 019349 77 LCLFNT-TTGTALRELN--FLTSILAVRLNKK-RLVIVL-REKTYIYDANT---------LAILDTIDTVPNLKGLCAFS 142 (342)
Q Consensus 77 i~iwd~-~~~~~~~~~~--~~~~v~~i~~~~~-~~~~~~-d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~ 142 (342)
|++||+ .+++...... +...|.++++++. .++.++ |+.|++||+++ ++.+..+. +...+.+++
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~ 157 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---VKNKIFTMD 157 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---SCCCEEEEE
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---eCCceEEEE
Confidence 999999 8887644444 6678999999863 344444 88999999987 65555443 345677888
Q ss_pred eCCCccEEEEeCCCCccEEEEEEccC-Cce--eEEEecccCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCCC------
Q 019349 143 PSLNACFLAVPASTTKGSVLVYNVME-LHS--HCEIDAHQAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEA------ 212 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~~g~i~iwd~~~-~~~--~~~~~~h~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~~------ 212 (342)
+++++ +++++ .+|.|++||+++ +.. ......|..+|.+++|+| ++++|++++.||. +++||+..+
T Consensus 158 ~~~~~--l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 158 TNSSR--LIVGM--NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDYNS 232 (342)
T ss_dssp ECSSE--EEEEE--STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCSTTC
T ss_pred ecCCc--EEEEe--CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCccccc
Confidence 88876 66665 589999999988 553 334457889999999999 9999999999997 589999877
Q ss_pred eeEEEeccCcC-------ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccccccc
Q 019349 213 TKSYSFRRGTY-------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLD 285 (342)
Q Consensus 213 ~~~~~~~~~~~-------~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
+.+..+..+.. ...|.+++|+|+++ +|++++.||.|++||+++.+...... .+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~-------~~h--------- 293 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK---FLYTAGSDGIISCWNLQTRKKIKNFA-------KFN--------- 293 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTC---CEEEEETTSCEEEEETTTTEEEEECC-------CCS---------
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCC---EEEEecCCceEEEEcCccHhHhhhhh-------ccc---------
Confidence 66667754321 23799999999999 99999999999999998765432111 000
Q ss_pred ccccceeeeccCCCccccEEEEEEeCCc-EEEEE
Q 019349 286 PADHHVLRNAFPAGVKRASVSVITYNGY-FVEYI 318 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~-v~~~~ 318 (342)
...+..+. +++..|++++.||. .+.|.
T Consensus 294 ----~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 294 ----EDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp ----SSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ----CCCceEec--CCCCeEEEEecCCccccccc
Confidence 11111222 44589999999998 55444
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.5e-30 Score=245.15 Aligned_cols=282 Identities=13% Similarity=0.142 Sum_probs=204.9
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCc-EEEEeCCCCcEEEEEe--eC---CEEEEEEcCC-CCeEEEEcCCCCCCCCCC
Q 019349 4 QSSSYPVFFVSFNQDNS-GFALSTKDG-FKIFDSSTGRLCYERA--VG---AFSIVEMLYS-SSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~-~la~g~~~g-~~v~d~~~~~~~~~~~--~~---~~~~~~~~~~-~~~~~~~~~g~~~~~~d~ 75 (342)
..+...|.+++|+|++. .|++|+.++ +++||+.+++.+.... .. .+..+.+.++ ++.+++.+. ++
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------dg 229 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-------DR 229 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-------TC
T ss_pred ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-------CC
Confidence 35778999999999998 788888877 6999999988766553 34 6777888887 777776664 89
Q ss_pred eEEEEECCCCcEEEEE-----ecCCceEEEEEc-CCeEEEEE-CCeEEEEECCCCceeeEEeCCCC--------------
Q 019349 76 RLCLFNTTTGTALREL-----NFLTSILAVRLN-KKRLVIVL-REKTYIYDANTLAILDTIDTVPN-------------- 134 (342)
Q Consensus 76 ~i~iwd~~~~~~~~~~-----~~~~~v~~i~~~-~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~-------------- 134 (342)
.|++||+.+++.+..+ .+...|.++.++ ...++.+. |+.|++||+.+++.+..+..+..
T Consensus 230 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN 309 (615)
T ss_dssp CEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET
T ss_pred eEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCC
Confidence 9999999999999988 566799999996 33344444 78999999998877666654310
Q ss_pred --------------------------------------------------------------CceEEEEeeC--------
Q 019349 135 --------------------------------------------------------------LKGLCAFSPS-------- 144 (342)
Q Consensus 135 --------------------------------------------------------------~~~~~~~~~~-------- 144 (342)
...+.++++.
T Consensus 310 ~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~ 389 (615)
T 1pgu_A 310 GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSI 389 (615)
T ss_dssp TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEE
T ss_pred CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEE
Confidence 0011111111
Q ss_pred --------------------------CC--------------------------------------ccEEEEeCCCC-cc
Q 019349 145 --------------------------LN--------------------------------------ACFLAVPASTT-KG 159 (342)
Q Consensus 145 --------------------------~~--------------------------------------~~~l~~~~~~~-~g 159 (342)
++ +.++++++ . +|
T Consensus 390 ~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~d~ 467 (615)
T 1pgu_A 390 SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGL--EEGN 467 (615)
T ss_dssp ETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEE--TTTS
T ss_pred eCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEee--cCCC
Confidence 00 12233332 2 56
Q ss_pred EEEEEEccCCcee-EEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEec----
Q 019349 160 SVLVYNVMELHSH-CEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ---- 234 (342)
Q Consensus 160 ~i~iwd~~~~~~~-~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~---- 234 (342)
.|++||+.+++.. ..+.+|..+|++++|+|+|++|++++.||. |++||+.+++.+..+.. .+...|.+++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~iw~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK-ILLYDLQSREVKTSRWA-FRTSKINAISWKPAEKG 545 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEECCSC-CCSSCEEEEEECCCC--
T ss_pred eEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCe-EEEeeCCCCcceeEeec-CCCCceeEEEEcCcccc
Confidence 6666666665444 556789999999999999999999999998 58999999999887753 1456799999999
Q ss_pred ------CCCcccEEEEEeCCCcEEEEecCCCC-CCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEE
Q 019349 235 ------SMQFQDILVATSSSGSLHVFSPGFAI-NQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSV 307 (342)
Q Consensus 235 ------d~~~~~~l~~~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
+++ +|++++.||+|++||++... .... +..+ ...+..+.+.+++. |++
T Consensus 546 ~~~~~~~~~---~l~~~~~dg~i~iw~~~~~~~~~~~-------~~~h--------------~~~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 546 ANEEEIEED---LVATGSLDTNIFIYSVKRPMKIIKA-------LNAH--------------KDGVNNLLWETPST-LVS 600 (615)
T ss_dssp ----CCSCC---EEEEEETTSCEEEEESSCTTCCEEE-------TTSS--------------TTCEEEEEEEETTE-EEE
T ss_pred ccccccCCC---EEEEEcCCCcEEEEECCCCceechh-------hhcC--------------ccceEEEEEcCCCC-eEE
Confidence 998 99999999999999998763 2111 1111 11122233344447 999
Q ss_pred EEeCCcEEEEEEec
Q 019349 308 ITYNGYFVEYIFSI 321 (342)
Q Consensus 308 ~~~dg~v~~~~~~~ 321 (342)
++.||.|++|+++.
T Consensus 601 ~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 601 SGADACIKRWNVVL 614 (615)
T ss_dssp EETTSCEEEEEEC-
T ss_pred ecCCceEEEEeeec
Confidence 99999999999875
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.5e-30 Score=239.00 Aligned_cols=270 Identities=11% Similarity=0.160 Sum_probs=198.8
Q ss_pred CCCCC-eEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 5 SSSYP-VFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 5 ~~~~~-V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
.+..+ +.+++| ++++|++|+.++ +++||+.+++.+.... .+.+..+.+.++. .++.++ .|++|++|
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s-------~dg~i~vw 188 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS-------TDRTVRVW 188 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE-------TTSCEEEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe-------CCCCEEEE
Confidence 45555 567777 457899998887 6999999998776654 4566666665444 444443 48999999
Q ss_pred ECCCCcEEEEEe-cCCceEEEEEc--CC--eEEEEE-CCeEEEEECCCCceee-----------------------EEeC
Q 019349 81 NTTTGTALRELN-FLTSILAVRLN--KK--RLVIVL-REKTYIYDANTLAILD-----------------------TIDT 131 (342)
Q Consensus 81 d~~~~~~~~~~~-~~~~v~~i~~~--~~--~~~~~~-d~~i~i~d~~~~~~~~-----------------------~~~~ 131 (342)
|+.+++++..+. +...|.++++. ++ .++.++ |+.|++||+.+++... .+..
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999988887 55689999987 33 234444 8899999998765332 2222
Q ss_pred CCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 019349 132 VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~ 211 (342)
+...+.+++++ +.++++++ .||.|++||+.+++++..+.+|..+|.+++|+|++++|++|+.||+ |++||+++
T Consensus 269 --~~~~v~~~~~~--~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd~~~ 341 (464)
T 3v7d_B 269 --HMASVRTVSGH--GNIVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLEN 341 (464)
T ss_dssp --CSSCEEEEEEE--TTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETTT
T ss_pred --ccceEEEEcCC--CCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECCC
Confidence 23345566544 55888887 5899999999999999999999999999999999999999999998 58999999
Q ss_pred CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccce
Q 019349 212 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHV 291 (342)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
++.+..+..+ ...|.+++|+ +. +|++++.||+|++||+++...... ...........|+
T Consensus 342 ~~~~~~~~~h--~~~v~~~~~~--~~---~l~s~s~dg~v~vwd~~~~~~~~~--------~~~~~~~~~~~~~------ 400 (464)
T 3v7d_B 342 GELMYTLQGH--TALVGLLRLS--DK---FLVSAAADGSIRGWDANDYSRKFS--------YHHTNLSAITTFY------ 400 (464)
T ss_dssp TEEEEEECCC--SSCEEEEEEC--SS---EEEEEETTSEEEEEETTTCCEEEE--------EECTTCCCEEEEE------
T ss_pred CcEEEEEeCC--CCcEEEEEEc--CC---EEEEEeCCCcEEEEECCCCceeee--------ecCCCCccEEEEE------
Confidence 9999988643 5569999997 45 899999999999999987543211 0000000111222
Q ss_pred eeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 292 LRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 292 ~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
+++..|++++ ||.+++|++..
T Consensus 401 --------~~~~~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 401 --------VSDNILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp --------ECSSEEEEEE-TTEEEEEETTT
T ss_pred --------eCCCEEEEec-CCeEEEEECCC
Confidence 3335666666 99999998754
No 64
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.6e-32 Score=249.44 Aligned_cols=241 Identities=12% Similarity=0.110 Sum_probs=172.1
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCCCcE--EEE--EeeCCEEEEEEcC-CCCeEEEEcCCCCCCCCCCeE
Q 019349 5 SSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRL--CYE--RAVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 5 ~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~~~~--~~~--~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~i 77 (342)
+++..|+||+|+| ++++||+|+.|| ++|||+.+++. ... .|.+.|..+.+.+ +++.++.++. |++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~-------D~~v 189 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM-------EGTT 189 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS-------SSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC-------CCEE
Confidence 4567899999999 567899999887 69999987643 222 2446677788875 4567766654 8999
Q ss_pred EEEECCCCcEEEEEecC---CceEEEEEcCCeEEEE--E-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCcc-EE
Q 019349 78 CLFNTTTGTALRELNFL---TSILAVRLNKKRLVIV--L-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNAC-FL 150 (342)
Q Consensus 78 ~iwd~~~~~~~~~~~~~---~~v~~i~~~~~~~~~~--~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 150 (342)
++||++++......... ..+.+++++++..+++ . |+.|++||++. +.+..+..|. ..+.+++++|++. ++
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~--~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHK--KKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCS--SCEEEEEECTTCSSEE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEeccc--ceEEeeeecCCCceEE
Confidence 99999876544333322 2577888987753333 3 78999999965 4445555443 4577777777765 56
Q ss_pred EEeCCCCccEEEEEEccCCceeEE---EecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCc---
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCE---IDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP--- 224 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~---~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~--- 224 (342)
++++ .||.|++||+++.+.... ..+|..+|++++|+|+|++|++++.||+ |++||+.+++....+..+...
T Consensus 267 ~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 267 ATAS--VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp EEEE--TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCS
T ss_pred EEec--CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEecccccccc
Confidence 6666 689999999988764433 3579999999999999999999999998 589999999877666433211
Q ss_pred -eeEEEEEEecCCCcccEEEEEe------------CCCcEEEEecCCCCC
Q 019349 225 -STIFSLSFGQSMQFQDILVATS------------SSGSLHVFSPGFAIN 261 (342)
Q Consensus 225 -~~v~~l~fs~d~~~~~~l~~~s------------~dg~i~vwd~~~~~~ 261 (342)
..+....|+|++. ++++++ .+++|++||+.+++.
T Consensus 344 ~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 344 HLTPIKAAWHPRYN---LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp SSCCCBCEECSSSS---CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred cceeEEEEEcCCCC---EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 1133456666665 555553 346799999887654
No 65
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.4e-30 Score=229.74 Aligned_cols=237 Identities=16% Similarity=0.179 Sum_probs=182.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|..+|.+++|+|++.+|++|+.|+ +++||+.+++.+... +...+..+.+.++++.++.++. |++|++|
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-------d~~i~~w 145 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-------EREIKLW 145 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-------TSCEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-------CCEEEEE
Confidence 45778999999999999999998887 699999998776544 4567888888888888877664 8999999
Q ss_pred ECCCCcEEEEE----ecCCceEEEEEcCCe------------EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEee
Q 019349 81 NTTTGTALREL----NFLTSILAVRLNKKR------------LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (342)
Q Consensus 81 d~~~~~~~~~~----~~~~~v~~i~~~~~~------------~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (342)
|+... ..... .+...|.++.++++. ++.++ |+.|++||. +.+....+..+.. .+.++++
T Consensus 146 d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~--~v~~~~~ 221 (343)
T 2xzm_R 146 NILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHES--NVNHLSI 221 (343)
T ss_dssp ESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSS--CEEEEEE
T ss_pred eccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccc--cceEEEE
Confidence 99743 33333 234579999998863 44444 899999994 4566666665544 5778888
Q ss_pred CCCccEEEEeCCCCccEEEEEEccCC-ceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEE--Eecc
Q 019349 144 SLNACFLAVPASTTKGSVLVYNVMEL-HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY--SFRR 220 (342)
Q Consensus 144 ~~~~~~l~~~~~~~~g~i~iwd~~~~-~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~--~~~~ 220 (342)
+|++.+|++++ .||.|++||+.+. .....+ .|...|++++|+|++.+|++++ |+. +++||+.+++... .+..
T Consensus 222 s~~g~~l~sgs--~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~-d~~-v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 222 SPNGKYIATGG--KDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGT-DQG-VKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp CTTSSEEEEEE--TTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEE-SSC-EEEEESSSCCSCSEEECCC
T ss_pred CCCCCEEEEEc--CCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEEC-CCC-EEEEEeCCCCCCceEEeec
Confidence 89999999988 6899999999544 344444 3566799999999999887665 556 5899998876533 3321
Q ss_pred C---------cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 221 G---------TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 221 ~---------~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
. .+...|.+++|+|+++ +|++|+.||+|++|+++++
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~g~---~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNALGK---KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSSSC---CEEEEETTSEEEEEEEEEE
T ss_pred CcchhhhhhcCCCCceEEEEECCCCC---eEEEecCCceEEEEEEEcc
Confidence 1 2344699999999999 9999999999999998754
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.9e-30 Score=266.38 Aligned_cols=238 Identities=15% Similarity=0.186 Sum_probs=199.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
+.|...|++++|+|||++|++|+.++ +++||+.+++.+... +...+..+.+.+++++++.++. |++|++|
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------d~~v~vw 684 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-------DKKVKIW 684 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-------CCeEEEE
Confidence 36788999999999999999998887 699999999876654 4467778888888888887764 8999999
Q ss_pred ECCCCcEEEEEec-CCceEEEEEcC--CeEE--EEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeC
Q 019349 81 NTTTGTALRELNF-LTSILAVRLNK--KRLV--IVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~~--~~~~--~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 154 (342)
|+.+++.+..+.. ...|.++.|++ +..+ .++ |+.|++||+.+++.+..+..+.. .+.+++++|++.++++++
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN--SVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS--CEEEEEECSSTTEEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC--CEEEEEEecCCCEEEEEE
Confidence 9999999988864 45899999987 3333 333 78999999999998888876544 577777788888999888
Q ss_pred CCCccEEEEEEccCCceeEEE-------------------------------------------------------eccc
Q 019349 155 STTKGSVLVYNVMELHSHCEI-------------------------------------------------------DAHQ 179 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~~-------------------------------------------------------~~h~ 179 (342)
.||.|++||+.+++....+ .+|.
T Consensus 763 --~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 763 --ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp --SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred --CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 6899999998776543322 1678
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 180 APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 180 ~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
..|.+++|+|+++++++++.||. |++||+.+++.+..+.. +...|.+++|+|+++ +|++++.||+|++|++..
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~---~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRG--HLSWVHGVMFSPDGS---SFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSS---EEEEEETTSCEEEEEHHH
T ss_pred CceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecCC--CccceEEEEECCCCC---EEEEEeCCCeEEEEEccc
Confidence 89999999999999999999998 58999999999888864 356799999999999 999999999999999764
No 67
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-29 Score=235.70 Aligned_cols=280 Identities=14% Similarity=0.181 Sum_probs=214.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
..+..+|.+++|+ +++|++|+.++ +++||+.+++.......+.-.+..+.++++.++.++. |++|++||+
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~-------dg~i~~wd~ 226 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR-------DATLRVWDI 226 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEET-------TSEEEEEES
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeC-------CCEEEEEEC
Confidence 4578899999998 56888888777 6999999998776654433333344446677666654 899999999
Q ss_pred CCCcEEEEEec-CCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccE
Q 019349 83 TTGTALRELNF-LTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 83 ~~~~~~~~~~~-~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
.+++.+..+.. ...|.++.++++.+++++ |+.|++||+.+++.+..+..+.. .+.++++ ++..+++++ .||.
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~--~d~~ 300 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQF--DGIHVVSGS--LDTS 300 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS--CEEEEEE--CSSEEEEEE--TTSC
T ss_pred CCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC--ceEEEEE--CCCEEEEEe--CCCe
Confidence 99999888764 458999999888888777 88999999999998888875544 4666666 456888887 5899
Q ss_pred EEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc-CceeEEEEEEecCCCcc
Q 019349 161 VLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-YPSTIFSLSFGQSMQFQ 239 (342)
Q Consensus 161 i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~-~~~~v~~l~fs~d~~~~ 239 (342)
|++||+++++.+..+.+|...+.++.++ +++|++|+.||. |++||+++++.+..+.... +...|.+++|+ +.
T Consensus 301 i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-- 373 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN-- 373 (445)
T ss_dssp EEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SS--
T ss_pred EEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CC--
Confidence 9999999999999999999999998874 679999999998 5899999999988886422 45569999996 45
Q ss_pred cEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCc----EE
Q 019349 240 DILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY----FV 315 (342)
Q Consensus 240 ~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~----v~ 315 (342)
+|++++.||+|++||+++++.... +.. .....+...+..+.+.+++..+++++.||. ++
T Consensus 374 -~l~s~~~dg~v~iwd~~~~~~~~~----------~~~------~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~ 436 (445)
T 2ovr_B 374 -FVITSSDDGTVKLWDLKTGEFIRN----------LVT------LESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLL 436 (445)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEEE----------EEE------CTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEE
T ss_pred -EEEEEeCCCeEEEEECCCCceeee----------eec------cccCCCCceEEEEEecCCEEEEEEcccCCCCccEEE
Confidence 899999999999999987754321 000 000011112233344555578999999998 99
Q ss_pred EEEEecC
Q 019349 316 EYIFSIN 322 (342)
Q Consensus 316 ~~~~~~~ 322 (342)
+|+++.+
T Consensus 437 v~df~~~ 443 (445)
T 2ovr_B 437 VLDFDVD 443 (445)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998754
No 68
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.4e-29 Score=222.29 Aligned_cols=272 Identities=13% Similarity=0.110 Sum_probs=205.4
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEe--e--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC
Q 019349 10 VFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA--V--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~ 85 (342)
.++|+||+++ +||+|.++.++|||+++++.+.... . ..+..+.+.+++++++..+. |++|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~-------Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-------SAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-------TSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC-------CCcEEEeecCCc
Confidence 4679999986 8999998889999999998665432 2 45778888888888877664 899999999999
Q ss_pred cEEEEEecC-CceEEEEEcCCeEEEEE-CCeEEEEECCCC-ceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEE
Q 019349 86 TALRELNFL-TSILAVRLNKKRLVIVL-REKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVL 162 (342)
Q Consensus 86 ~~~~~~~~~-~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~ 162 (342)
+++..+..+ ..+.++...+..++.+. ++.+++|+.... ..+..+..+.. .+..+...+++.++++++ .||.|+
T Consensus 100 ~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~s~~--~d~~i~ 175 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--EVCGLRWAPDGRHLASGG--NDNLVN 175 (318)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEEEE--TTSCEE
T ss_pred eeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC--ceEEEEEcCCCCEEEEEe--cCccee
Confidence 999887654 47888888888777777 789999999775 44455555444 456666777788998887 689999
Q ss_pred EEEccCCce----eEEEecccCCeeEEEECCCCCEE---EEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecC
Q 019349 163 VYNVMELHS----HCEIDAHQAPLAAIVLSSNGMYI---ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 235 (342)
Q Consensus 163 iwd~~~~~~----~~~~~~h~~~v~~i~~s~dg~~l---at~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d 235 (342)
+||+++++. ......|..+|.+++++|++..+ ++++.+++ |++||...+....... ....+..++|+|+
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-i~lwd~~~~~~~~~~~---~~~~v~~~~~~~~ 251 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVD---AHSQVCSILWSPH 251 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEEETT
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-EEEEeccccccccccc---ceeeeeeeeeccc
Confidence 999987753 34556788999999999976533 45667776 6999999888766553 2345899999999
Q ss_pred CCcccEEEEEe--CCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCc
Q 019349 236 MQFQDILVATS--SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 313 (342)
Q Consensus 236 ~~~~~~l~~~s--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 313 (342)
+. .+++++ .|++|+|||+++.+.... +.++ ...+..+.+.+++++|+++|.||+
T Consensus 252 ~~---~~~~~sg~~d~~i~iwd~~~~~~~~~-------l~gH--------------~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 252 YK---ELISGHGFAQNQLVIWKYPTMAKVAE-------LKGH--------------TSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp TT---EEEEEECTTTCCEEEEETTTCCEEEE-------ECCC--------------SSCEEEEEECTTSSCEEEEETTTE
T ss_pred cc---ceEEEEEcCCCEEEEEECCCCcEEEE-------EcCC--------------CCCEEEEEEcCCCCEEEEEecCCe
Confidence 98 776654 799999999987665332 1111 112223334445589999999999
Q ss_pred EEEEEEec
Q 019349 314 FVEYIFSI 321 (342)
Q Consensus 314 v~~~~~~~ 321 (342)
|++|++.+
T Consensus 308 v~iWd~~~ 315 (318)
T 4ggc_A 308 LRLWRCFE 315 (318)
T ss_dssp EEEECCSC
T ss_pred EEEEECCC
Confidence 99998754
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.3e-30 Score=236.83 Aligned_cols=272 Identities=13% Similarity=0.140 Sum_probs=206.7
Q ss_pred CCCCC-eEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 5 SSSYP-VFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 5 ~~~~~-V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
.|... +.+++| +|++|++|+.++ +++||+.+++.+.....+.-.+..+.++++.++.++. |++|++||+
T Consensus 116 ~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~-------dg~i~vwd~ 186 (445)
T 2ovr_B 116 GHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGST-------DRTLKVWNA 186 (445)
T ss_dssp CSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEET-------TSCEEEEET
T ss_pred ccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeC-------CCeEEEEEC
Confidence 45555 455554 688999998887 6999999998776654433333344445667666654 899999999
Q ss_pred CCCcEEEEEe-cCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccE
Q 019349 83 TTGTALRELN-FLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 83 ~~~~~~~~~~-~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
.+++.+..+. +...|.++.++++.+++++ |+.|++||+.+++.+..+..+.. .+.++++ ++..+++++ .||.
T Consensus 187 ~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~--~dg~ 260 (445)
T 2ovr_B 187 ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA--AVRCVQY--DGRRVVSGA--YDFM 260 (445)
T ss_dssp TTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSS--CEEEEEE--CSSCEEEEE--TTSC
T ss_pred CcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc--cEEEEEE--CCCEEEEEc--CCCE
Confidence 9999988876 4558999999998888887 88999999999999888876554 4556666 455788777 5899
Q ss_pred EEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCccc
Q 019349 161 VLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 240 (342)
Q Consensus 161 i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~ 240 (342)
|++||+++++++..+.+|..+|.+++| ++++|++|+.||+ |++||+++++.+..+..+ ...+.+++++ +.
T Consensus 261 i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~--~~~v~~~~~~--~~--- 330 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTGH--QSLTSGMELK--DN--- 330 (445)
T ss_dssp EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECCC--CSCEEEEEEE--TT---
T ss_pred EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcCC--cccEEEEEEe--CC---
Confidence 999999999999999999999999999 7899999999998 589999999998888643 4457777764 56
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEe
Q 019349 241 ILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 241 ~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~ 320 (342)
+|++++.||+|++||+++.+........ ..+...+..+.+. ++.|++++.||.|++|++.
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~------------------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCLQTLQGP------------------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECST------------------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEccC------------------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC
Confidence 8999999999999999876543211100 0011111122222 3689999999999999865
Q ss_pred c
Q 019349 321 I 321 (342)
Q Consensus 321 ~ 321 (342)
.
T Consensus 391 ~ 391 (445)
T 2ovr_B 391 T 391 (445)
T ss_dssp T
T ss_pred C
Confidence 4
No 70
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-32 Score=247.69 Aligned_cols=282 Identities=11% Similarity=0.144 Sum_probs=208.5
Q ss_pred CCCeEEEEEcCCCC-EEEEE----------cCCc-EEEEeCCCCc---EEE-EEeeCCEEEEEEcCCCCeEEEEcCCCCC
Q 019349 7 SYPVFFVSFNQDNS-GFALS----------TKDG-FKIFDSSTGR---LCY-ERAVGAFSIVEMLYSSSLLAIVGAGEQP 70 (342)
Q Consensus 7 ~~~V~~l~fs~d~~-~la~g----------~~~g-~~v~d~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 70 (342)
..+|.+++|+|+++ +|++| +.++ +++||+.+++ .+. ..+...+..+.+.++...++..+.
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---- 87 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD---- 87 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES----
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc----
Confidence 34688999999997 88988 6666 6999998774 221 124467888888888888877664
Q ss_pred CCCCCeEEEEECCC----CcEEEEEe-cCCceEEEEEcCC---eEEEEE-CCeEEEEECCCCc------eeeEE-eCCCC
Q 019349 71 SLSPRRLCLFNTTT----GTALRELN-FLTSILAVRLNKK---RLVIVL-REKTYIYDANTLA------ILDTI-DTVPN 134 (342)
Q Consensus 71 ~~~d~~i~iwd~~~----~~~~~~~~-~~~~v~~i~~~~~---~~~~~~-d~~i~i~d~~~~~------~~~~~-~~~~~ 134 (342)
|+.|++||+.+ .+.+..+. +...|.+++|+++ .++.++ |+.|++||+.+++ ....+ ....+
T Consensus 88 ---dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 88 ---NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp ---SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred ---CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 89999999987 34666654 4568999999875 344444 7899999998875 32222 11223
Q ss_pred CceEEEEeeCCC-ccEEEEeCCCCccEEEEEEccCCceeEEEecc------cCCeeEEEECCCC-CEEEEEeCCC---cE
Q 019349 135 LKGLCAFSPSLN-ACFLAVPASTTKGSVLVYNVMELHSHCEIDAH------QAPLAAIVLSSNG-MYIATASEQG---TI 203 (342)
Q Consensus 135 ~~~~~~~~~~~~-~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h------~~~v~~i~~s~dg-~~lat~s~dg---~~ 203 (342)
...+.+++++|+ +.++++++ .+|.|++||+++++.+..+..| ..+|++++|+|++ .+|++++.|+ .
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~- 241 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAG--SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS- 241 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEES--SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC-
T ss_pred CCCeeEEEeCCCCCcEEEEEc--CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce-
Confidence 345667777777 67888877 5899999999999998888876 7899999999997 6999999998 7
Q ss_pred EEEEEcCCC-eeEEEeccCcCceeEEEEEEec-CCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccc
Q 019349 204 IRVFLVSEA-TKSYSFRRGTYPSTIFSLSFGQ-SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVN 281 (342)
Q Consensus 204 irlwd~~~~-~~~~~~~~~~~~~~v~~l~fs~-d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
|++||++++ +.+..+.. .+...|.+++|+| ++. +|++++.||+|++||+++.+.... +..+......
T Consensus 242 i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~---~l~s~~~dg~v~~wd~~~~~~~~~-------~~~~~~~v~~ 310 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEH---LLLSSGRDNTVLLWNPESAEQLSQ-------FPARGNWCFK 310 (416)
T ss_dssp CCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSS---CEEEEESSSEEEEECSSSCCEEEE-------EECSSSCCCC
T ss_pred EEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCC---eEEEEeCCCCEEEeeCCCCcccee-------ecCCCCceEE
Confidence 589999987 45555431 2355699999999 888 999999999999999987654321 1111111112
Q ss_pred ccccccccceeeeccCCCccc-cEEEEEEeCCcEEEEEEecCC
Q 019349 282 EVLDPADHHVLRNAFPAGVKR-ASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~v~~~~~~~~~ 323 (342)
..|+| ++ ..|++++.||.|++|++....
T Consensus 311 ~~~s~--------------~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 311 TKFAP--------------EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEECT--------------TCTTEEEECCSSSEEEEEESCCCC
T ss_pred EEECC--------------CCCCEEEEEecCCcEEEEEccCCC
Confidence 23444 33 689999999999999986544
No 71
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=9.9e-30 Score=223.97 Aligned_cols=244 Identities=9% Similarity=0.085 Sum_probs=178.1
Q ss_pred EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC--cEEEEEe-cCCceEEEEEcC----CeEEEEE-CCeE
Q 019349 44 RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG--TALRELN-FLTSILAVRLNK----KRLVIVL-REKT 115 (342)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~--~~~~~~~-~~~~v~~i~~~~----~~~~~~~-d~~i 115 (342)
.|.+.+..+.+.++++.++..+. |++|+|||+.++ +.+..+. +...|.+++|++ +.++.++ |++|
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~-------D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSS-------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEET-------TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred CCcCceEEEEECCCCCEEEEEeC-------CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 35567778888888888887764 899999999743 5566665 456899999964 3444555 8999
Q ss_pred EEEECCCCc--eeeEEeCCCCCceEEEEeeCCC--ccEEEEeCCCCccEEEEEEccCCc--eeEEEecccCCeeEEEECC
Q 019349 116 YIYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELH--SHCEIDAHQAPLAAIVLSS 189 (342)
Q Consensus 116 ~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~h~~~v~~i~~s~ 189 (342)
++||+.+++ .+..+..+.. .+.+++++|+ +.+|++++ .||.|++||+++.. ....+.+|...|++++|+|
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSA--SVNSVQWAPHEYGPMLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSS--CEEEEEECCGGGCSEEEEEE--TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECC
T ss_pred EEEEcCCCceEEEEEeecCCC--ceeEEEeCcCCCCcEEEEEE--CCCcEEEEEecCCCceeeeeeecccCccceEeecC
Confidence 999998774 3444544433 4666666665 67888887 68999999998763 2456789999999999999
Q ss_pred C-------------CCEEEEEeCCCcEEEEEEcCCCe----eEEEeccCcCceeEEEEEEecCC---CcccEEEEEeCCC
Q 019349 190 N-------------GMYIATASEQGTIIRVFLVSEAT----KSYSFRRGTYPSTIFSLSFGQSM---QFQDILVATSSSG 249 (342)
Q Consensus 190 d-------------g~~lat~s~dg~~irlwd~~~~~----~~~~~~~~~~~~~v~~l~fs~d~---~~~~~l~~~s~dg 249 (342)
+ +++||+|+.|++ ||+||+++++ ....+.. |...|.+++|+|++ . +||+++.|+
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~---~las~s~D~ 229 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRS---YMASVSQDR 229 (297)
T ss_dssp CC------------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSE---EEEEEETTS
T ss_pred CcccccccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCce---EEEEEECCC
Confidence 7 579999999998 5899998765 4455543 35679999999995 6 999999999
Q ss_pred cEEEEecCCCCCCCCCCCccccc--cccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 250 SLHVFSPGFAINQRRGGRTSSIL--GSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 250 ~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
+|+|||++........ ..+ ..+. ..+..+.+.++++.|++++.||.|++|+...+
T Consensus 230 ~v~iWd~~~~~~~~~~----~~~~~~~~~--------------~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKK----TLLKEEKFP--------------DVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEEEESSTTSCCEE----EESSSSCCS--------------SCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cEEEEEeCCCCCccce----eeeecccCC--------------CcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 9999999764321100 000 0111 11122333445588999999999999988654
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=9.5e-30 Score=226.61 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=187.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc----EEEE--EeeCCEEEEEEcCC--CCeEEEEcCCCCCCCCC
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR----LCYE--RAVGAFSIVEMLYS--SSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~----~~~~--~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~d 74 (342)
..|..+|++++|+|++++|++|+.++ +++||+.++. .... .+...+..+.+.+. .+.++.++. |
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~-------d 80 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY-------D 80 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET-------T
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC-------C
Confidence 46889999999999999999999887 6999998762 3322 34466777777763 666666654 8
Q ss_pred CeEEEEECCCC---------cEEEEEe-cCCceEEEEEcCC--e--EEEEE-CCeEEEEECCCCceeeEEeC--------
Q 019349 75 RRLCLFNTTTG---------TALRELN-FLTSILAVRLNKK--R--LVIVL-REKTYIYDANTLAILDTIDT-------- 131 (342)
Q Consensus 75 ~~i~iwd~~~~---------~~~~~~~-~~~~v~~i~~~~~--~--~~~~~-d~~i~i~d~~~~~~~~~~~~-------- 131 (342)
++|++||+.++ +.+..+. +...|.+++|+++ . ++.++ |+.|++||+.+++.+..+..
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999999887 4455554 4568999999876 3 44444 88999999988765433320
Q ss_pred ---CCCCceEEEEeeCCC---ccEEEEeCCCCccEEEEEEccCCce--eEEEecccCCeeEEEECCCC----CEEEEEeC
Q 019349 132 ---VPNLKGLCAFSPSLN---ACFLAVPASTTKGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNG----MYIATASE 199 (342)
Q Consensus 132 ---~~~~~~~~~~~~~~~---~~~l~~~~~~~~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg----~~lat~s~ 199 (342)
..+...+.+++++|+ +..+++++ .++.+.+|+...++. +..+.+|..+|++++|+|++ ++|++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSA--LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEE--TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEec--CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 122345667777775 77888887 578898888777764 67788999999999999998 89999999
Q ss_pred CCcEEEEEEcCCC----------------------------------------------eeEEEeccCcCceeEEEEEEe
Q 019349 200 QGTIIRVFLVSEA----------------------------------------------TKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 200 dg~~irlwd~~~~----------------------------------------------~~~~~~~~~~~~~~v~~l~fs 233 (342)
||+ |++||++++ +.+..+.. +...|++++|+
T Consensus 239 dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~s 315 (351)
T 3f3f_A 239 DGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGEVWSVSWN 315 (351)
T ss_dssp TSC-EEEEEEEECC---------------------------------------CCSEEEEEEEEECT--TSSCEEEEEEC
T ss_pred CCe-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--ccccEEEEEEc
Confidence 998 589999875 44455542 34569999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
|+++ +|++++.||+|+||+++.+..
T Consensus 316 ~~~~---~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 316 LTGT---ILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp SSSC---CEEEEETTSCEEEEEECTTSC
T ss_pred CCCC---EEEEecCCCcEEEEecCcCcc
Confidence 9999 999999999999999987654
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=1.1e-29 Score=252.67 Aligned_cols=281 Identities=12% Similarity=0.122 Sum_probs=219.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
+.+...|.+++|+|++.+|++|+.+| +++||+.+++..... +...+..+.+.++++.+++++. |+.|++|
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~vw 82 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------DFRIRVF 82 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-------TSEEEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-------CCeEEEE
Confidence 35788999999999999999998887 699999998766544 4467888888888888887764 8999999
Q ss_pred ECCCCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCC-ceeeEEeCCCCCceEEEEeeCC-CccEEEEeC
Q 019349 81 NTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSL-NACFLAVPA 154 (342)
Q Consensus 81 d~~~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 154 (342)
|+.+++.+..+. +...|.+++|+++. +++++ |+.|++||+.++ .....+..+.. .+.+++++| ++..+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH--FVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS--CEEEEEEETTEEEEEEEEE
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC--cEEEEEEEcCCCCEEEEEe
Confidence 999999998887 55689999999876 44444 789999999887 55666665544 466777777 677888887
Q ss_pred CCCccEEEEEEccCCceeEEEeccc-CCeeEEEECC--CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 155 STTKGSVLVYNVMELHSHCEIDAHQ-APLAAIVLSS--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~~~~h~-~~v~~i~~s~--dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
.||.|++||+.+++....+..|. .++.+++|+| ++.+|++++.||+ |++||+.+++.+..+..+ ...|.+++
T Consensus 161 --~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~--~~~v~~~~ 235 (814)
T 3mkq_A 161 --LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEGH--MSNVSFAV 235 (814)
T ss_dssp --TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEECC--SSCEEEEE
T ss_pred --CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcCC--CCCEEEEE
Confidence 68999999999888877777655 8999999999 9999999999997 589999999988888643 45699999
Q ss_pred EecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeC
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYN 311 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 311 (342)
|+|++. +|++++.||+|++||+.+....... ...........|+|.+. ..+++.+.|
T Consensus 236 ~~~~~~---~l~~~~~dg~v~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~-------------~~~~~~~~~ 292 (814)
T 3mkq_A 236 FHPTLP---IIISGSEDGTLKIWNSSTYKVEKTL-------NVGLERSWCIATHPTGR-------------KNYIASGFD 292 (814)
T ss_dssp ECSSSS---EEEEEETTSCEEEEETTTCSEEEEE-------CCSSSSEEEEEECTTCG-------------GGEEEEEET
T ss_pred EcCCCC---EEEEEeCCCeEEEEECCCCcEEEEe-------ecCCCcEEEEEEccCCC-------------ceEEEEEeC
Confidence 999999 9999999999999999876542211 11111111223444331 235777778
Q ss_pred CcEEEEEEec
Q 019349 312 GYFVEYIFSI 321 (342)
Q Consensus 312 g~v~~~~~~~ 321 (342)
+.+.+|.+..
T Consensus 293 ~~~~~~~~~~ 302 (814)
T 3mkq_A 293 NGFTVLSLGN 302 (814)
T ss_dssp TEEEEEECSC
T ss_pred CCEEEEEcCC
Confidence 8888887654
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=5.1e-30 Score=233.95 Aligned_cols=241 Identities=14% Similarity=0.136 Sum_probs=194.8
Q ss_pred CCCCCeEEEEEcCC----C---CEEEEEcCCc-EEEEeCCCCcE-----EEEE--e-----eCCEEEEEEc----CCCCe
Q 019349 5 SSSYPVFFVSFNQD----N---SGFALSTKDG-FKIFDSSTGRL-----CYER--A-----VGAFSIVEML----YSSSL 60 (342)
Q Consensus 5 ~~~~~V~~l~fs~d----~---~~la~g~~~g-~~v~d~~~~~~-----~~~~--~-----~~~~~~~~~~----~~~~~ 60 (342)
.+..+|.+++|+|+ + ++|++|+.++ +++||+.+++. .... + ...+..+.+. ++.+.
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 139 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 139 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCce
Confidence 46789999999999 9 9999988776 69999987763 3333 2 2567778888 77777
Q ss_pred -EEEEcCCCCCCCCCCeEEEEECCC------CcEEE-----EEe--------cCCceEEEEEcCCeEEEEE---CCeEEE
Q 019349 61 -LAIVGAGEQPSLSPRRLCLFNTTT------GTALR-----ELN--------FLTSILAVRLNKKRLVIVL---REKTYI 117 (342)
Q Consensus 61 -~~~~~~g~~~~~~d~~i~iwd~~~------~~~~~-----~~~--------~~~~v~~i~~~~~~~~~~~---d~~i~i 117 (342)
+++++. ++.|++||+.+ ++.+. .+. +...|.+++++++. .++. |+.|++
T Consensus 140 ~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 140 RLVATDV-------KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI 211 (397)
T ss_dssp EEEEEET-------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE
T ss_pred EEEEEeC-------CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE
Confidence 666553 89999999988 66554 553 35689999999887 4433 789999
Q ss_pred EECCCCceeeEEeC---C-CCCceEEEEeeCCCccEEEEeCCCCc---cEEEEEEccCCceeEEEec-------------
Q 019349 118 YDANTLAILDTIDT---V-PNLKGLCAFSPSLNACFLAVPASTTK---GSVLVYNVMELHSHCEIDA------------- 177 (342)
Q Consensus 118 ~d~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~---g~i~iwd~~~~~~~~~~~~------------- 177 (342)
||+++++.+..+.. + .....+.+++++|++.++++++ .+ |.|++||+.+++.+..+.+
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~--~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH--DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE--EETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe--cCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 99999998888876 4 0134577888888888999887 58 9999999999999999998
Q ss_pred ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEec------cC-------------cCceeEEEEEEecCC--
Q 019349 178 HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR------RG-------------TYPSTIFSLSFGQSM-- 236 (342)
Q Consensus 178 h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~------~~-------------~~~~~v~~l~fs~d~-- 236 (342)
|..+|.+++|+|++++|++++.||. |++||+++++.+..+. .+ .+...|.+++|+|++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 368 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence 9999999999999999999999997 5899999999998886 22 014569999999998
Q ss_pred --------CcccEEEEEeCCCcEEEEecCCC
Q 019349 237 --------QFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 237 --------~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
+ +|++++.||.|++|+++++
T Consensus 369 ~~~~~~~~~---~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 369 SGMGADLNE---SLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp BSTTCTTSC---EEEEEETTTEEEEEEEEC-
T ss_pred ccccccccc---eEEEecCCCcEEEEEcCCC
Confidence 7 8999999999999998764
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=8.5e-29 Score=230.94 Aligned_cols=237 Identities=11% Similarity=0.150 Sum_probs=191.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCC--CCeEEEEcCCCCCCCCCCeEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYS--SSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~~i~ 78 (342)
..+..+|.+++|+|++ +|++|+.++ +++||+.+++.+... +...+..+.+.+. .+.++.++ .|++|+
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s-------~d~~i~ 230 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS-------RDNTLH 230 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE-------TTSCEE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc-------CCCcEE
Confidence 4688999999999998 788887776 799999999776554 4466777777643 34454444 489999
Q ss_pred EEECCCCcEE-----------------------EEEe-cCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCC
Q 019349 79 LFNTTTGTAL-----------------------RELN-FLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVP 133 (342)
Q Consensus 79 iwd~~~~~~~-----------------------~~~~-~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~ 133 (342)
+||+.+++.. .... +...+.++..+++.+++++ |+.|++||+.+++.+..+..+.
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 9999877633 2222 3447888888888888887 8899999999999988886554
Q ss_pred CCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe
Q 019349 134 NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT 213 (342)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~ 213 (342)
. .+.++++++++..+++++ .||.|++||+.+++++..+.+|..+|.+++|+ +++|++|+.||+ |++||+.+++
T Consensus 311 ~--~v~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~~~ 383 (464)
T 3v7d_B 311 D--RIYSTIYDHERKRCISAS--MDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDANDYS 383 (464)
T ss_dssp S--CEEEEEEETTTTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTTCC
T ss_pred C--CEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCCCc
Confidence 4 577777788888999888 68999999999999999999999999999997 589999999997 5899999988
Q ss_pred eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCC
Q 019349 214 KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQ 262 (342)
Q Consensus 214 ~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~ 262 (342)
....+. +...+..++|+|++. +|++++ ||+|++||+++++..
T Consensus 384 ~~~~~~---~~~~~~~~~~~~~~~---~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 384 RKFSYH---HTNLSAITTFYVSDN---ILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEEEE---CTTCCCEEEEEECSS---EEEEEE-TTEEEEEETTTCCEE
T ss_pred eeeeec---CCCCccEEEEEeCCC---EEEEec-CCeEEEEECCCCcEE
Confidence 766653 233467789999999 899888 899999999887653
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-29 Score=251.02 Aligned_cols=238 Identities=11% Similarity=0.132 Sum_probs=182.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE-eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
.+...|++++|+|++++||+|+.++ ++||+....+..... +...+..+.+.+ +++++.++ .|++|++||+
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s-------~D~~v~lWd~ 86 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN-------AKDTVYVLSL 86 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEE-------TTCEEEEEET
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE-------CcCeEEEEEC
Confidence 4678999999999999999999887 699999887765543 335677788877 66566655 3899999999
Q ss_pred CCCcEEEEEecCCceEEEEEcCCeE--EEEE-CCeEEEEECCCCceee-EE--------eCCCCCceEEEEeeCCC-ccE
Q 019349 83 TTGTALRELNFLTSILAVRLNKKRL--VIVL-REKTYIYDANTLAILD-TI--------DTVPNLKGLCAFSPSLN-ACF 149 (342)
Q Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~--~~~~-d~~i~i~d~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~-~~~ 149 (342)
.+++++..+.++..|.+++|+++.. +++. |+.|++||+.++++.. .+ ....+...+.+++++|+ ...
T Consensus 87 ~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 87 YSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 9999999998888999999988754 3344 8899999999886531 11 01223345667777775 356
Q ss_pred EEEeCCCCccEEEEEEccCCceeEEEecc------------------cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 019349 150 LAVPASTTKGSVLVYNVMELHSHCEIDAH------------------QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~~~~~~~~~h------------------~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~ 211 (342)
+++++ .||.| +||+++++++..+..| ...|++++|+|||++||+|+.||+ |++||+++
T Consensus 167 l~~g~--~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lWd~~~ 242 (902)
T 2oaj_A 167 VLISY--EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFWDANS 242 (902)
T ss_dssp EEEEC--SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEEETTT
T ss_pred EEEEe--CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEEECCC
Confidence 66665 68999 9999999988888765 578999999999999999999998 58999999
Q ss_pred CeeEEE--ecc---C-----------cCceeEEEEEEe----cCCCcccEEEEEeCC-----CcEEEEec
Q 019349 212 ATKSYS--FRR---G-----------TYPSTIFSLSFG----QSMQFQDILVATSSS-----GSLHVFSP 256 (342)
Q Consensus 212 ~~~~~~--~~~---~-----------~~~~~v~~l~fs----~d~~~~~~l~~~s~d-----g~i~vwd~ 256 (342)
++.+.. +.. + .+...|.+++|+ ||+. .+|++|+.| .++++|++
T Consensus 243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~--~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYT--SLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEE--EEEEEEECSTTSSCCCEEEEEE
T ss_pred CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCC--EEEEeCCCCCCCCCceEEEEec
Confidence 987654 210 1 013369999996 4432 167777665 37888885
No 77
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=4.6e-29 Score=230.29 Aligned_cols=243 Identities=12% Similarity=0.125 Sum_probs=186.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
.+...|++|+|+|||++||+|+.|+ +++||+.+++.+.....+...+..+.+++..++..+. |+.+++||..
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~-------d~~i~~~d~~ 217 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSR-------SGHIHHHDVR 217 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEET-------TSEEEEEETT
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeC-------CCceeEeeec
Confidence 5667899999999999999999887 6999999998877766555555556667777666554 8999999987
Q ss_pred CCc-EEEEEe-cCCceEEEEEcCCeEEEE--E-CCeEEEEECCCCce----eeEEeCCCCCceEEEEeeCCC-ccEEEEe
Q 019349 84 TGT-ALRELN-FLTSILAVRLNKKRLVIV--L-REKTYIYDANTLAI----LDTIDTVPNLKGLCAFSPSLN-ACFLAVP 153 (342)
Q Consensus 84 ~~~-~~~~~~-~~~~v~~i~~~~~~~~~~--~-d~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 153 (342)
... .+..+. +...+..+.+.++...++ . |+.+++|+..+++. +.....+.. .+.++++.|. ...++++
T Consensus 218 ~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~--~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 218 VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG--AVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS--CEEEEEECTTCTTEEEEE
T ss_pred ccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC--ceeeeeeCCCcccEEEEE
Confidence 654 444554 455889999987654433 3 88999999987642 334433333 4555555553 3355544
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe--CCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s--~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
+...|++|++||+.++++...+..| ..+.++.|+|+++.|++++ .||+ |+|||+.+++++.++.. |...|++|+
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~g--H~~~V~~l~ 371 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLSLT 371 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEEEE
T ss_pred eecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcC--CCCCEEEEE
Confidence 3226999999999999998888765 5688999999999998876 7888 58999999999999964 356799999
Q ss_pred EecCCCcccEEEEEeCCCcEEEEecCCCCCCC
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFSPGFAINQR 263 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 263 (342)
|+||++ +|++|+.|++|+|||+....+.+
T Consensus 372 ~spdg~---~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 372 MSPDGA---TVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp ECTTSS---CEEEEETTTEEEEECCSCSSCC-
T ss_pred EcCCCC---EEEEEecCCeEEEEECCCCCccc
Confidence 999999 99999999999999997665443
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=5.3e-30 Score=230.62 Aligned_cols=238 Identities=13% Similarity=0.149 Sum_probs=187.2
Q ss_pred CCCCCeEEEEEcCC----CCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcC-CCCeEEEEcCCCCCCCCCCe
Q 019349 5 SSSYPVFFVSFNQD----NSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 5 ~~~~~V~~l~fs~d----~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~ 76 (342)
.+...|++++|+|+ +.+|++|+.++ +++||+.+++.+... +...+..+.+.+ +.+.++.++. |+.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-------dg~ 139 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-------DHA 139 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-------TSC
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-------CCe
Confidence 36688999999999 67899998887 699999998876554 446777788877 6677766654 899
Q ss_pred EEEEECCCCcEEEEE----ecCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeC------------------
Q 019349 77 LCLFNTTTGTALREL----NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDT------------------ 131 (342)
Q Consensus 77 i~iwd~~~~~~~~~~----~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~------------------ 131 (342)
|++||+++++.+..+ .+...|.+++|+++. ++.++ |+.|++||+++++....+..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 999999999988887 356699999998764 44444 88999999987654433221
Q ss_pred --------CCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce--------------eEEEecccCCeeEEEECC
Q 019349 132 --------VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--------------HCEIDAHQAPLAAIVLSS 189 (342)
Q Consensus 132 --------~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~--------------~~~~~~h~~~v~~i~~s~ 189 (342)
..+...+.+++++ +.++++++ .+|.|++||+.+++. +..+..|..+|++++|+|
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--GDLILSKS--CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM 295 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--TTEEEEEC--SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE
T ss_pred ccCccccccCCcceEEEEEEc--CCEEEEEe--cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC
Confidence 0122345555555 34888877 589999999987644 777889999999999999
Q ss_pred C--CCEEEEEeCCCcEEEEEEcCCCee----EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 190 N--GMYIATASEQGTIIRVFLVSEATK----SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 190 d--g~~lat~s~dg~~irlwd~~~~~~----~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+ |++|++|+.||. |++||+.+++. ...+..+.+...|.+++|+|+++ +|++++.||.|++||+.
T Consensus 296 ~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 296 DFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS---ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS---EEEEEETTSEEEEEEC-
T ss_pred CCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC---eEEEEeCCCEEEEEEec
Confidence 9 999999999998 58999998753 34555443356799999999999 99999999999999985
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.9e-29 Score=228.68 Aligned_cols=242 Identities=12% Similarity=0.091 Sum_probs=186.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
+...|.+++|+|++++|++|+.++ +++||+.+++.+..... ..+..+.+ +++.++..+. |+.|++||+
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-------dg~i~i~d~ 203 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR-------SGAIHHHDV 203 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET-------TSEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC-------CCCEEEEec
Confidence 678899999999999999998887 69999999887766544 44554444 6677766654 899999999
Q ss_pred C-CCcEEEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCc-cEEEEeCCC
Q 019349 83 T-TGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA-CFLAVPAST 156 (342)
Q Consensus 83 ~-~~~~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~ 156 (342)
+ .+..+..+. +...|.+++++++. +++++ |+.|++||+.+++.+..+..+.. .+.+++++|++ .++++++..
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA--AVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS--CCCEEEECTTSTTEEEEECCT
T ss_pred ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc--eEEEEEECCCCCCEEEEecCC
Confidence 8 455565554 45689999998874 44444 78999999999988888765544 45556666644 455554322
Q ss_pred CccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe--CCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEec
Q 019349 157 TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 234 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s--~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~ 234 (342)
.||.|++||+.+++++..+. |...|.+++|+|+|++|++++ .||. |++||+.+++.........+...|.+++|+|
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred CCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECC
Confidence 58999999999999888886 667899999999999999954 8887 5899999976655433223456799999999
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCCCCCC
Q 019349 235 SMQFQDILVATSSSGSLHVFSPGFAINQR 263 (342)
Q Consensus 235 d~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 263 (342)
+++ +|++++.||+|++|++..++...
T Consensus 360 dg~---~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 360 DGR---ILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp TSS---EEEEECTTSEEEEEECCC-----
T ss_pred CCC---EEEEEeCCCcEEEEECCCCcccc
Confidence 999 99999999999999998876543
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=2.8e-29 Score=241.57 Aligned_cols=239 Identities=12% Similarity=0.095 Sum_probs=193.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCC----cEEEEE--eeCC-EEEEEEcC--CCCeEEEEcCCCCCCCCCC
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTG----RLCYER--AVGA-FSIVEMLY--SSSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~----~~~~~~--~~~~-~~~~~~~~--~~~~~~~~~~g~~~~~~d~ 75 (342)
.+...|.+++|+|||++|++++++.+++||+.++ +..... +... +..+.+.+ +++++++.+. |+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~-------dg 88 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE-------SG 88 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET-------TS
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC-------CC
Confidence 4677899999999999999999777899999987 655544 3456 88888888 8888877664 89
Q ss_pred eEEEEECCCC--------cEEEEEe-cCCceEEEEEcCCeE--EEEE-C----CeEEEEECCCCceeeEEeCCCCCceEE
Q 019349 76 RLCLFNTTTG--------TALRELN-FLTSILAVRLNKKRL--VIVL-R----EKTYIYDANTLAILDTIDTVPNLKGLC 139 (342)
Q Consensus 76 ~i~iwd~~~~--------~~~~~~~-~~~~v~~i~~~~~~~--~~~~-d----~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (342)
+|++||+.++ +.+..+. +...|.+++|+++.. +++. + +.|++|| .++.+..+..+. ..+.
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~--~~v~ 164 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS--QRIN 164 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS--SCEE
T ss_pred EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC--ccEE
Confidence 9999999755 4555555 456899999998753 3344 3 4777777 566666665544 4577
Q ss_pred EEeeCCCcc-EEEEeCCCCccEEEEEEccCCceeEEEecccC---CeeEEEECCC-CCEEEEEeCCCcEEEEEEcCCCee
Q 019349 140 AFSPSLNAC-FLAVPASTTKGSVLVYNVMELHSHCEIDAHQA---PLAAIVLSSN-GMYIATASEQGTIIRVFLVSEATK 214 (342)
Q Consensus 140 ~~~~~~~~~-~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~---~v~~i~~s~d-g~~lat~s~dg~~irlwd~~~~~~ 214 (342)
+++++|++. .+++++ .||.|++||+.+++.+..+.+|.. +|++++|+|+ +++|++++.||. |++||+.+++.
T Consensus 165 ~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~ 241 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVG--DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEF 241 (615)
T ss_dssp EEEECSSSSCEEEEEE--TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCE
T ss_pred EEEECCCCCcEEEEEe--CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCE
Confidence 778888876 677776 689999999999999999999999 9999999999 999999999998 58999999999
Q ss_pred EEEeccC--cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 215 SYSFRRG--TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 215 ~~~~~~~--~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
+..+... .+...|.+++|+ ++. +|++++.|++|++||+++.+.
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~---~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQ---KFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSS---EEEEEETTSEEEEEETTTTEE
T ss_pred eEEecccccccCCceEEEEEc-CCC---EEEEEcCCCcEEEEECCCCcE
Confidence 8888321 235679999999 888 999999999999999987654
No 81
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-29 Score=232.69 Aligned_cols=234 Identities=11% Similarity=0.078 Sum_probs=186.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCc---EEEEEee--------------------------------------
Q 019349 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSSTGR---LCYERAV-------------------------------------- 46 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~---~~~~~~~-------------------------------------- 46 (342)
.++.+++|+|||++|+++.++.+++||+.+++ .+.....
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 57899999999998888888889999999887 4332221
Q ss_pred ------------------CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC--CCcEEEEE---ecCCceEEEEEc
Q 019349 47 ------------------GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALREL---NFLTSILAVRLN 103 (342)
Q Consensus 47 ------------------~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~--~~~~~~~~---~~~~~v~~i~~~ 103 (342)
+.+..+.+.++++.++++++ .|++|++||+. +++++..+ .+...|.+++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEG------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc
Confidence 13666777778888644443 48999999998 88887776 456789999999
Q ss_pred CCe--EEEEE-CCeEEEEECCCCceee----EEeCCCCCceEEEEeeCCC---ccEEEEeCCCCccEEEEEEccCCceeE
Q 019349 104 KKR--LVIVL-REKTYIYDANTLAILD----TIDTVPNLKGLCAFSPSLN---ACFLAVPASTTKGSVLVYNVMELHSHC 173 (342)
Q Consensus 104 ~~~--~~~~~-d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~g~i~iwd~~~~~~~~ 173 (342)
++. ++++. ++.+++|++.+++... .+..+. ..+.+++++|+ +.+|++++ .|+.|++||+.+++.+.
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV--SMLTDVHLIKDSDGHQFIITSD--RDEHIKISHYPQCFIVD 234 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS--SCEEEEEEEECTTSCEEEEEEE--TTSCEEEEEESCTTCEE
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccceeeeccc--CceEEEEEcCCCCCCcEEEEEc--CCCcEEEEECCCCceee
Confidence 875 33444 7899999998876543 333333 35667777777 88888887 58999999999998887
Q ss_pred E-EecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-----------------------cCceeEEE
Q 019349 174 E-IDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-----------------------TYPSTIFS 229 (342)
Q Consensus 174 ~-~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-----------------------~~~~~v~~ 229 (342)
. +.+|..+|++++|+ +|++|++++.|++ |++||+.+++.+..+..+ .....|.+
T Consensus 235 ~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 235 KWLFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp EECCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred eeecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 7 56899999999999 9999999999997 589999999988877532 11234899
Q ss_pred EEEecCCCcccEEEEEe-CCCcEEEEec
Q 019349 230 LSFGQSMQFQDILVATS-SSGSLHVFSP 256 (342)
Q Consensus 230 l~fs~d~~~~~~l~~~s-~dg~i~vwd~ 256 (342)
++|+|+++ +|++++ .|+.|+||++
T Consensus 313 i~~~~~~~---~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 313 IIKSKNLP---FVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEECSSSS---EEEEEETTCSEEEEEEE
T ss_pred EEEeCCCC---EEEEEECCCCeEEEEEe
Confidence 99999999 899998 8999999999
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.3e-30 Score=270.64 Aligned_cols=276 Identities=14% Similarity=0.127 Sum_probs=221.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
...+|.+++|+|+++++++|+.+| +++||+.+++..... +...+..+.+.++++.++.++. |++|++||+
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-------dg~i~vwd~ 1032 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE-------DSVIQVWNW 1032 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS-------SSBEEEEET
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC-------CCEEEEEEC
Confidence 356799999999999999999887 599999998766553 3456667788888888877664 899999999
Q ss_pred CCCcEEEEEecCCceEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccE
Q 019349 83 TTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
.+++.+....+...|.++.++++..+++. |+.|++||+.+++.+..+..+... +.+++++|++.++++++ .||+
T Consensus 1033 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~--v~~~~~s~d~~~l~s~s--~d~~ 1108 (1249)
T 3sfz_A 1033 QTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGT--VLSCAISSDATKFSSTS--ADKT 1108 (1249)
T ss_dssp TTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSC--CCCEEECSSSSSCEEEC--CSSC
T ss_pred CCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCc--EEEEEECCCCCEEEEEc--CCCc
Confidence 99988866667779999999988766655 889999999999998888776554 55566677888899888 6899
Q ss_pred EEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEecc-------CcCceeEEEEEEe
Q 019349 161 VLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR-------GTYPSTIFSLSFG 233 (342)
Q Consensus 161 i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~-------~~~~~~v~~l~fs 233 (342)
|++||+.+++++..+.+|..+|++++|+|||++||+|+.||+ |++||+.+++.+..+.. ..+...|.+++|+
T Consensus 1109 v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs 1187 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE-IRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFS 1187 (1249)
T ss_dssp CCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-CCEEESSSSCCCCCCCCCC-------CCSCCCEEEEC
T ss_pred EEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-EEEEECCCCceEEEeccccccccccccCceEEEEEEC
Confidence 999999999999999999999999999999999999999998 58999999987655411 1234569999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCc
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 313 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 313 (342)
||++ +|++++ |+|++||+.++........ .... +..+.+.+++..|++++.||.
T Consensus 1188 ~dg~---~l~s~~--g~v~vwd~~~g~~~~~~~~-------~~~~--------------i~~~~~s~dg~~l~~~~~dg~ 1241 (1249)
T 3sfz_A 1188 PDSK---TLVSAG--GYLKWWNVATGDSSQTFYT-------NGTN--------------LKKIHVSPDFRTYVTVDNLGI 1241 (1249)
T ss_dssp TTSS---CEEEES--SSEEEBCSSSCBCCCCCCC-------SSCC--------------CCCCEECSSSCCEEEECTTCC
T ss_pred CCCC---EEEECC--CeEEEEECCCCceeeeeec-------cCCc--------------ccEEEECCCCCEEEEecCCcE
Confidence 9999 888886 8999999988765432111 0001 112233445588999999999
Q ss_pred EEEEEE
Q 019349 314 FVEYIF 319 (342)
Q Consensus 314 v~~~~~ 319 (342)
+++|++
T Consensus 1242 v~vw~l 1247 (1249)
T 3sfz_A 1242 LYILQV 1247 (1249)
T ss_dssp EEEECC
T ss_pred EEEEee
Confidence 999976
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-30 Score=240.20 Aligned_cols=282 Identities=9% Similarity=0.073 Sum_probs=201.0
Q ss_pred EEcCCCCEEEEEcCCcEEEEeCCCCcEEEEE---eeCCEEEEEEcC-CCCeEEEEcCCCCCCCCCCeEEEEECCC---Cc
Q 019349 14 SFNQDNSGFALSTKDGFKIFDSSTGRLCYER---AVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRRLCLFNTTT---GT 86 (342)
Q Consensus 14 ~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~i~iwd~~~---~~ 86 (342)
.|+|+++.+++++ .|+. +++++... |.+.+..+.+.+ +++.++.++. |++|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~-----~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~-------dg~v~vwd~~~~~~~~ 100 (437)
T 3gre_A 34 EFGPIQEIVRSPN-----MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSD-------QGVIKIWNLKEIIVGE 100 (437)
T ss_dssp GGCCCCCCCCCCC-----GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEET-------TSEEEEEEHHHHHTTC
T ss_pred hcCCccccccccc-----cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecC-------CceEEEeECcccccCc
Confidence 5788888777655 4773 45555554 336788888888 7778777764 89999999876 33
Q ss_pred ---EEEEEecCCceEEEEEcCCe--EEEEE-CCeEEEEECC---CCceeeEE--------eCCC--CCceEEEEe--eCC
Q 019349 87 ---ALRELNFLTSILAVRLNKKR--LVIVL-REKTYIYDAN---TLAILDTI--------DTVP--NLKGLCAFS--PSL 145 (342)
Q Consensus 87 ---~~~~~~~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~---~~~~~~~~--------~~~~--~~~~~~~~~--~~~ 145 (342)
....+.+...|.+++|+++. ++.++ |+.|++||+. +++.+... .... ....+.++. +++
T Consensus 101 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 101 VYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp CCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred ccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 34556678899999998854 44445 8899999994 45444332 2211 223333333 667
Q ss_pred CccEEEEeCCCCccEEEEEEccCCceeEEEec--ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELHSHCEIDA--HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~--h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
++.++++++ .||.|++||+++++++..+.+ |..+|++++|+|++++|++|+.||+ |++||+++++.+..+... +
T Consensus 181 ~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~-~ 256 (437)
T 3gre_A 181 EKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGI-IDIWDIRFNVLIRSWSFG-D 256 (437)
T ss_dssp SCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSC-EEEEETTTTEEEEEEBCT-T
T ss_pred CCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCe-EEEEEcCCccEEEEEecC-C
Confidence 788998888 689999999999999999988 8999999999999999999999998 589999999998887533 3
Q ss_pred ceeEEEEEEe----cCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccc-----------
Q 019349 224 PSTIFSLSFG----QSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPAD----------- 288 (342)
Q Consensus 224 ~~~v~~l~fs----~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 288 (342)
...|.+++|+ |++. +|++++.||+|++||+++.+......... .......|.|.+
T Consensus 257 ~~~v~~~~~~~~~s~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 257 HAPITHVEVCQFYGKNSV---IVVGGSSKTFLTIWNFVKGHCQYAFINSD-------EQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp CEEEEEEEECTTTCTTEE---EEEEESTTEEEEEEETTTTEEEEEEESSS-------SCCCGGGGSCBCSSGGGCCCCCC
T ss_pred CCceEEEEeccccCCCcc---EEEEEcCCCcEEEEEcCCCcEEEEEEcCC-------CCCccceecccccccccceeccc
Confidence 4579999554 5677 99999999999999998765433211110 000111222221
Q ss_pred -cceeeeccCCCccccEEEEEEeCCcEEEEEEecCC
Q 019349 289 -HHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 289 -~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~~ 323 (342)
+...+..+.+. +++.|++++.||.|++|++...+
T Consensus 327 ~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 327 RSLNALSTISVS-NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp CSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGG
T ss_pred ccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcc
Confidence 22223334444 44789999999999999876543
No 84
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9.3e-29 Score=222.44 Aligned_cols=242 Identities=10% Similarity=0.067 Sum_probs=190.2
Q ss_pred CCCCCCCeEEEEEcCC---CCEEEEEcCCc-EEEEeCCC-CcEE---EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQD---NSGFALSTKDG-FKIFDSST-GRLC---YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d---~~~la~g~~~g-~~v~d~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (342)
...|...|++++|+|+ |++|++|+.++ +++||+.+ ++.+ +..+...+..+.+.++++.++.++. |
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-------D 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-------T
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC-------C
Confidence 3568899999999999 59999999887 69999987 4333 3345577888888888888887664 8
Q ss_pred CeEEEEECCCCcEEEEEecCCceEEEEE--cCCeE--EEEE-CCeEEEEECCCCceeeEEeCCCC---------------
Q 019349 75 RRLCLFNTTTGTALRELNFLTSILAVRL--NKKRL--VIVL-REKTYIYDANTLAILDTIDTVPN--------------- 134 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~~v~~i~~--~~~~~--~~~~-d~~i~i~d~~~~~~~~~~~~~~~--------------- 134 (342)
+.|++||+.+++.+....+...|.++.| +++.. +.++ |+.|++||+++++.+..+..+..
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEE
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEe
Confidence 9999999999998888888889999999 77753 3344 88999999998887777654321
Q ss_pred --------------------------CceEEEEeeCCCc--cEEEEeCCCCccEEEEEEccCC---ceeEEEecccC---
Q 019349 135 --------------------------LKGLCAFSPSLNA--CFLAVPASTTKGSVLVYNVMEL---HSHCEIDAHQA--- 180 (342)
Q Consensus 135 --------------------------~~~~~~~~~~~~~--~~l~~~~~~~~g~i~iwd~~~~---~~~~~~~~h~~--- 180 (342)
.....++.+.+.. ..+++++ .+|.|++||+... +.+..+.+|..
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeeeeeecccc
Confidence 1122223332221 2266666 5899999999887 56777888876
Q ss_pred ---------CeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcE
Q 019349 181 ---------PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 181 ---------~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
+|++++|+|++++|++|+.||. |++||+.+++.+..+.. +...|.+++|+|+++ +|++++.|+..
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~g~---~l~~~s~d~~~ 339 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLKTSEQ--LDQPISACCFNHNGN---IFAYASSYDWS 339 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEECCC--CSSCEEEEEECTTSS---CEEEEECCCST
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEEEecC--CCCCceEEEECCCCC---eEEEEeccccc
Confidence 7999999999999999999998 58999999999988864 355799999999999 99999999877
Q ss_pred EEEecCCC
Q 019349 252 HVFSPGFA 259 (342)
Q Consensus 252 ~vwd~~~~ 259 (342)
+.|++-..
T Consensus 340 ~~~~~~~~ 347 (368)
T 3mmy_A 340 KGHEFYNP 347 (368)
T ss_dssp TCGGGCCT
T ss_pred ccccccCC
Confidence 66665443
No 85
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=9.3e-29 Score=242.44 Aligned_cols=238 Identities=15% Similarity=0.179 Sum_probs=189.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..|...|.+++|+|++++|++|+.|+ ++|||+.+++..... |...+..+.+.++++.++.++. |++|++|
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------D~~i~iw 499 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR-------DRTIKLW 499 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-------TSCEEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC-------CCEEEEE
Confidence 35788999999999999999999887 699999998765543 4567888888888888877764 8999999
Q ss_pred ECCCCcEEEEE----ecCCceEEEEEcCCe----EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 81 NTTTGTALREL----NFLTSILAVRLNKKR----LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 81 d~~~~~~~~~~----~~~~~v~~i~~~~~~----~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
|.......... .+...|.+++|+++. ++.++ |++|++||+++.++...+..|.. .+.+++++|++.+++
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~ 577 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG--YVSTVAVSPDGSLCA 577 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEE
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC--CEEEEEEeCCCCEEE
Confidence 98654333222 134479999998863 44444 88999999999988888876544 577788888899999
Q ss_pred EeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC--------
Q 019349 152 VPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY-------- 223 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~-------- 223 (342)
+++ .||.|++||+.+++.+..+.. ...|.+++|+|++.+|++++.+ . |++||+++++.+..+.....
T Consensus 578 sg~--~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~-~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 578 SGG--KDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEH-G-IKIWDLESKSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EEE--TTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETT-E-EEEEETTTTEEEEEECCCCC--------
T ss_pred EEe--CCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCC-C-EEEEECCCCCChhhhccccccccccccc
Confidence 988 689999999999998877764 4679999999999999888755 4 68999999998877642211
Q ss_pred ---------ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 224 ---------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 224 ---------~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
...+.+++||||++ +|++|+.||+|+||++..
T Consensus 653 ~~~~~~~~~~~~~~~l~~spdg~---~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSADGS---TLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp --------CCCCEEEEEECTTSS---EEEEEETTSEEEEEEC--
T ss_pred cccccCCceeEEeeeEEEcCCCC---EEEEEcCCCeEEEEeccC
Confidence 01278899999999 999999999999999863
No 86
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-28 Score=247.12 Aligned_cols=300 Identities=11% Similarity=0.049 Sum_probs=197.2
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCcEEEEeCCCCcEEEEEee--------------------CCEEEEEEcCCCCeEE
Q 019349 4 QSSSYPVFFVSFNQDN-SGFALSTKDGFKIFDSSTGRLCYERAV--------------------GAFSIVEMLYSSSLLA 62 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~-~~la~g~~~g~~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~ 62 (342)
..+..+|.+++|+|++ ..|++|++++..+||+.+++.+..... ..+..+.+.+++..++
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 3577899999999964 678899888844999999876654332 3477788888888887
Q ss_pred EEcCCCCCCCCCCeEEEEECCCCcEEEEEec-------------------CCceEEEEEc----CC--eEEEEE--C---
Q 019349 63 IVGAGEQPSLSPRRLCLFNTTTGTALRELNF-------------------LTSILAVRLN----KK--RLVIVL--R--- 112 (342)
Q Consensus 63 ~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~-------------------~~~v~~i~~~----~~--~~~~~~--d--- 112 (342)
.++. |++|++||+++++++....+ ...|.+++|. ++ .+++++ +
T Consensus 228 sgs~-------Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 228 TIHE-------DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp EEET-------TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred EEEC-------CCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 7764 89999999999988764211 2268888883 33 223322 2
Q ss_pred --CeEEEEEC----------------------------------------------------------------------
Q 019349 113 --EKTYIYDA---------------------------------------------------------------------- 120 (342)
Q Consensus 113 --~~i~i~d~---------------------------------------------------------------------- 120 (342)
..+.+|++
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~ 380 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML 380 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEE
Confidence 14556553
Q ss_pred -CCCceeeE-------EeCCCCCce--------------------------------EEEEeeCCCccEEEEeCCCCccE
Q 019349 121 -NTLAILDT-------IDTVPNLKG--------------------------------LCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 121 -~~~~~~~~-------~~~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
.++..... +..+..... +..++++|++.+|++++ .||+
T Consensus 381 ~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs--~Dgt 458 (902)
T 2oaj_A 381 YPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH--SNGS 458 (902)
T ss_dssp TTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE--TTSE
T ss_pred CCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec--CCCc
Confidence 22211000 000000000 01123357788999888 6899
Q ss_pred EEEEEccCCcee--EEE----e-----cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe----------------
Q 019349 161 VLVYNVMELHSH--CEI----D-----AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT---------------- 213 (342)
Q Consensus 161 i~iwd~~~~~~~--~~~----~-----~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~---------------- 213 (342)
|++||+.+++.. ..+ . +|...|++|+|+|||++||+|+.||+ |+|||+.+++
T Consensus 459 VrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-V~lwd~~~~~~~~~~~~~~~~~~~~~ 537 (902)
T 2oaj_A 459 VRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD-VVLFKYEVNQFYSVENRPESGDLEMN 537 (902)
T ss_dssp EEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-EEEEEEEECCC---------------
T ss_pred EEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE-EEEEEecCccccCccccCCCccccee
Confidence 999999877421 111 1 78999999999999999999999998 5899998663
Q ss_pred -----------------------------eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCC
Q 019349 214 -----------------------------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRR 264 (342)
Q Consensus 214 -----------------------------~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~ 264 (342)
++..+.. +.+.|++|+||||| +||+|+.|++|+|||++.+....+
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~--h~~~V~svafSpdG----~lAsgs~D~tv~lwd~~~~~~~~~ 611 (902)
T 2oaj_A 538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA--NKGKTSAINNSNIG----FVGIAYAAGSLMLIDRRGPAIIYM 611 (902)
T ss_dssp CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC--CSCSEEEEEECBTS----EEEEEETTSEEEEEETTTTEEEEE
T ss_pred eeeccccCCccccccccccCCCCCCCccceeEEEEc--CCCcEEEEEecCCc----EEEEEeCCCcEEEEECCCCeEEEE
Confidence 2444433 45679999999999 699999999999999876543110
Q ss_pred CCCccccccccccccccccccccccceeeeccCCC-----cc---ccEEEEEEeCCcEEEEEEecCCCCeeeeEEEee
Q 019349 265 GGRTSSILGSILPESVNEVLDPADHHVLRNAFPAG-----VK---RASVSVITYNGYFVEYIFSINNCCESTWTLDRE 334 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~~ 334 (342)
..+..+. .+|...+..+.|. ++ +..|++++.||+|++|++.+...++....+.+.
T Consensus 612 -----~~~~~~~----------~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~ 674 (902)
T 2oaj_A 612 -----ENIREIS----------GAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDI 674 (902)
T ss_dssp -----EEGGGTC----------SSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEE
T ss_pred -----eehhHhc----------cccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCc
Confidence 0000000 0111112222223 33 479999999999999999776555544555443
No 87
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-29 Score=225.56 Aligned_cols=267 Identities=13% Similarity=0.115 Sum_probs=187.1
Q ss_pred EEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC---------
Q 019349 14 SFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--------- 83 (342)
Q Consensus 14 ~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~--------- 83 (342)
++.+|+.+|++|+.|+ +++||+.+++.+.....+.+..+. +.+. ++..+ .|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~--~~~~-~~s~s-------~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGG--EHPA-IISRG-------PCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTC--CCCS-EEEEC-------STTEEEEEETTTEEEEEETT
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeee--eCCc-eEEec-------CCCeEEEEEccCceEEeecC
Confidence 4456888899998888 599999998776655433332222 2333 33333 48999999654
Q ss_pred CCcEEEEEecC--CceEEEEEcC--Ce--EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 84 TGTALRELNFL--TSILAVRLNK--KR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 84 ~~~~~~~~~~~--~~v~~i~~~~--~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
+++.+..+... ..|.++++++ +. ++.++ |++|++||+++++.+.....+ ....+.+++++|++.++++++
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~lasg~-- 189 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLLLALYS-- 189 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC-SSCCCCEEEECTTSCEEEEEC--
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC-CCCceEEEEECCCCCEEEEEc--
Confidence 55656555533 5799999988 54 33344 889999999999886655333 233467788888999999887
Q ss_pred CccEEEEEEccCCcee-EEEec-ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc-CceeE--EEEE
Q 019349 157 TKGSVLVYNVMELHSH-CEIDA-HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-YPSTI--FSLS 231 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~-~~~~~-h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~-~~~~v--~~l~ 231 (342)
.||.|++||+++++.+ ..+.. |..+|++++|+|+|.+|+++++ ++ |++||+++++.+..+.... +...+ .+++
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QT-VVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SB-EEEEETTSSTTCBSSCCCBC-----CCEEEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-Ce-EEEEEcCCCCcceeecccccccccccceEEE
Confidence 6899999999999887 78888 9999999999999999999994 46 6899999987655443210 11123 4699
Q ss_pred EecCCCcccEEEEEeC-CCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEe
Q 019349 232 FGQSMQFQDILVATSS-SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITY 310 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (342)
|+|+++ +|++++. |+.|+||+++...+.- . . .+.....|.+. ..+...+++++.
T Consensus 268 ~~~~g~---~l~~~s~~d~~i~v~~~~~~~~~~------~-~----~~~~~~~~~~~-----------~~~~~~l~~~~~ 322 (343)
T 3lrv_A 268 IDDSGK---NMIAYSNESNSLTIYKFDKKTKNW------T-K----DEESALCLQSD-----------TADFTDMDVVCG 322 (343)
T ss_dssp ECTTSS---EEEEEETTTTEEEEEEECTTTCSE------E-E----EEEEECCC---------------CCCCEEEEEEE
T ss_pred ECCCCC---EEEEecCCCCcEEEEEEcccccce------E-e----cCceeEecCcc-----------ccccceeEEEec
Confidence 999999 9999998 9999999987654311 0 0 00111123321 113478999999
Q ss_pred CCcEEEEEEe
Q 019349 311 NGYFVEYIFS 320 (342)
Q Consensus 311 dg~v~~~~~~ 320 (342)
||.+.++-..
T Consensus 323 d~~~~~~~~~ 332 (343)
T 3lrv_A 323 DGGIAAILKT 332 (343)
T ss_dssp TTEEEEEEEC
T ss_pred CCceEEEEec
Confidence 9999988543
No 88
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2.6e-29 Score=223.26 Aligned_cols=247 Identities=11% Similarity=0.104 Sum_probs=175.6
Q ss_pred EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE--EEEEe-cCCceEEEEEcC----CeEEEEE-CC
Q 019349 42 YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA--LRELN-FLTSILAVRLNK----KRLVIVL-RE 113 (342)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~--~~~~~-~~~~v~~i~~~~----~~~~~~~-d~ 113 (342)
...|.+.+..+.+.++++.++..+. |++|++||+.+++. +..+. +...|.+++|++ +.++.++ |+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~-------D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSS-------DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEET-------TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeC-------CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 3446678888888888888887764 89999999988753 44554 456999999964 3455555 89
Q ss_pred eEEEEECCCCc--eeeEEeCCCCCceEEEEeeCCC--ccEEEEeCCCCccEEEEEEccCCce---eEEEecccCCeeEEE
Q 019349 114 KTYIYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHS---HCEIDAHQAPLAAIV 186 (342)
Q Consensus 114 ~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~g~i~iwd~~~~~~---~~~~~~h~~~v~~i~ 186 (342)
+|++||+++++ ....+..|... +.+++++|+ +.+|++++ .||+|++||++.... ...+.+|...|.+++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~--V~~v~~~p~~~g~~lasgs--~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSS--VNSVCWAPHDYGLILACGS--SDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSC--CCEEEECCTTTCSCEEEEC--SSSCEEEEEECSSSCEEECCBTTSSSSCBCCCE
T ss_pred EEEEEECCCCcceEEEEccCCCCc--eEEEEECCCCCCcEEEEEc--CCCCEEEEecCCCCCcceeeeeccccCCcceEE
Confidence 99999998863 45555555444 444555554 77888887 689999999987632 345678999999999
Q ss_pred ECCC-----------------CCEEEEEeCCCcEEEEEEcCCC---eeEEEeccCcCceeEEEEEEecCC----CcccEE
Q 019349 187 LSSN-----------------GMYIATASEQGTIIRVFLVSEA---TKSYSFRRGTYPSTIFSLSFGQSM----QFQDIL 242 (342)
Q Consensus 187 ~s~d-----------------g~~lat~s~dg~~irlwd~~~~---~~~~~~~~~~~~~~v~~l~fs~d~----~~~~~l 242 (342)
|+|+ +++||+|+.|++ ||+||++.+ +.+..+.. +...|.+++|+|++ . +|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~~~---~l 231 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEA--HSDWVRDVAWAPSIGLPTS---TI 231 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBC--CSSCEEEEECCCCSSCSCC---EE
T ss_pred EccccCCccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeeccc--CCCceEEEEecCCCCCCCc---eE
Confidence 9998 478999999998 589999765 34455543 35579999999986 6 89
Q ss_pred EEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 243 VATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 243 ~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
++++.|++|+||+++....... ....+..+.. .+..+.+.++++.|++++.||.|++|+.+.+
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~---~~~~~~~~~~--------------~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTW---SPKLLHKFND--------------VVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCC---BCCEEEECSS--------------CEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred EEEcCCCeEEEEEccCccccch---hhhhhhcCCC--------------cEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 9999999999999876421110 0011111111 1223333455588999999999999988643
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=6.8e-28 Score=239.75 Aligned_cols=242 Identities=11% Similarity=0.125 Sum_probs=196.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
.+..+|.+++|+|++++|++|+.++ +++||+.+++..... +...+..+.+.+++..+++++. |++|++||
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~vw~ 125 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD-------DLTVKLWN 125 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET-------TSEEEEEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC-------CCEEEEEE
Confidence 5778999999999999999998887 699999999776554 4466778888888888876664 89999999
Q ss_pred CCCC-cEEEEEe-cCCceEEEEEcC-Ce--EEEEE-CCeEEEEECCCCceeeEEeCCC-CCceEEEEeeCCCccEEEEeC
Q 019349 82 TTTG-TALRELN-FLTSILAVRLNK-KR--LVIVL-REKTYIYDANTLAILDTIDTVP-NLKGLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 82 ~~~~-~~~~~~~-~~~~v~~i~~~~-~~--~~~~~-d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 154 (342)
+.++ .....+. +...|.+++|+| +. +++++ |+.|++||+.+++....+..+. ......++++.+++.++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9887 4455554 456899999998 54 33333 8899999999888777776544 434445555545888999888
Q ss_pred CCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEec
Q 019349 155 STTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 234 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~ 234 (342)
.+|.|++||+.+++.+..+.+|..+|++++|+|+|++|++++.||+ |++||+.+++.+..+..+ ...+.+++|+|
T Consensus 206 --~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~~--~~~v~~~~~~~ 280 (814)
T 3mkq_A 206 --DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNVG--LERSWCIATHP 280 (814)
T ss_dssp --TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECCS--SSSEEEEEECT
T ss_pred --CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeecC--CCcEEEEEEcc
Confidence 6899999999999999999999999999999999999999999998 589999999998888644 45699999999
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 235 SMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 235 d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
++. ..+++++.++.+.+|++....
T Consensus 281 ~~~--~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 281 TGR--KNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp TCG--GGEEEEEETTEEEEEECSCCS
T ss_pred CCC--ceEEEEEeCCCEEEEEcCCCC
Confidence 986 244666667889999987654
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.4e-27 Score=212.92 Aligned_cols=240 Identities=14% Similarity=0.147 Sum_probs=187.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
..+..+|.+++|+|++++|++|+.++ +++|+........... ........+....+.++.++. |+.+++|
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~-------d~~~~~~ 155 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR-------DKTIKLW 155 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-------TSCEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecC-------CCeEEEE
Confidence 35678999999999999999999888 5999998886654433 245555666666777766654 8999999
Q ss_pred ECCCCcEEEEE--ecCCceEEEEEcCC---eEEE-EE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 81 NTTTGTALREL--NFLTSILAVRLNKK---RLVI-VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 81 d~~~~~~~~~~--~~~~~v~~i~~~~~---~~~~-~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
|.......... .+...+..++++++ .+++ ++ |+.|++||+.+++.+..+..+.. .+.+++++|++.+|+++
T Consensus 156 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 156 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASG 233 (340)
T ss_dssp CTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEE
T ss_pred EeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEE
Confidence 98766544332 23457888888654 2333 33 78999999999998888866544 57778888889999998
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-------cCcee
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-------TYPST 226 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-------~~~~~ 226 (342)
+ .||.|++||+.+.+++..+..| ..|.+++|+|++.++ +++.|+. |++||++++..+..+... .+...
T Consensus 234 s--~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 234 G--KDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWL-CAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp E--TTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEE-EEEETTE-EEEEETTTTEEEEEECCC-------CCCCC
T ss_pred e--CCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCcee-eccCCCE-EEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 8 6899999999999998888754 679999999987655 5556887 589999998887776431 23456
Q ss_pred EEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 227 IFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 227 v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
|++++|+||++ +|++|+.||+|+|||+++++
T Consensus 309 v~~l~~s~dg~---~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQ---TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSS---EEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCC---EEEEEeCCCEEEEEeCCCcC
Confidence 99999999999 99999999999999998764
No 91
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-27 Score=215.59 Aligned_cols=245 Identities=11% Similarity=0.121 Sum_probs=195.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
..+..+|.+++|+|++++|++++.++ +++||+.+++.+.... ...+..+.+.++++.++.++.. ....++.|++||
T Consensus 71 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~~~g~i~~~d 148 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN--VMKNPGSINIYE 148 (369)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC--BTTBCCEEEEEE
T ss_pred hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC--ccCCCCEEEEEE
Confidence 35778999999999999999998887 6999999987765543 4667788888888888776641 000138999999
Q ss_pred CCCCcE-----------EEEEe-cCC--ceEEEEEcCCe--EEEEE-CCeEEEEECCC-CceeeEEeCCCCCceEEEEee
Q 019349 82 TTTGTA-----------LRELN-FLT--SILAVRLNKKR--LVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSP 143 (342)
Q Consensus 82 ~~~~~~-----------~~~~~-~~~--~v~~i~~~~~~--~~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (342)
+.++.. +..+. +.. .+.+++++++. ++++. ++.|++||+.+ .+.+..+..+.. .+.++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~ 226 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK--SISDMQF 226 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS--CEEEEEE
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC--ceeEEEE
Confidence 876542 12221 222 78999998874 33344 78999999998 677777776544 5777788
Q ss_pred CCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCc-------------EEEEEEcC
Q 019349 144 SLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGT-------------IIRVFLVS 210 (342)
Q Consensus 144 ~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~-------------~irlwd~~ 210 (342)
+|++.+|++++ .||.|++||+.+++.+..+. +..++.+++|+|+++++++++.++. .+++||+.
T Consensus 227 ~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 227 SPDLTYFITSS--RDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp CTTSSEEEEEE--TTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred CCCCCEEEEec--CCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 88888999887 58999999999999888887 7889999999999999999999872 36899999
Q ss_pred CCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 211 EATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+++.+..+..+ ...|.+++|+|+++ +|++++.||+|+||+++...
T Consensus 304 ~~~~~~~~~~~--~~~v~~~~~s~~~~---~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 304 FEEEIGRVQGH--FGPLNTVAISPQGT---SYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TCCEEEEEECC--SSCEEEEEECTTSS---EEEEEETTSEEEEEEECHHH
T ss_pred CCcchhheecc--cCcEEEEEECCCCC---EEEEEcCCCeEEEEECcccc
Confidence 99998888643 45699999999999 99999999999999998754
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=221.25 Aligned_cols=238 Identities=11% Similarity=0.146 Sum_probs=180.2
Q ss_pred CCCCCeEEEEEcCC---CCEEEEEcCCc-EEEEeCCCCc-EEEE--EeeCCEEEEEEc------CCCCeEEEEcCCCCCC
Q 019349 5 SSSYPVFFVSFNQD---NSGFALSTKDG-FKIFDSSTGR-LCYE--RAVGAFSIVEML------YSSSLLAIVGAGEQPS 71 (342)
Q Consensus 5 ~~~~~V~~l~fs~d---~~~la~g~~~g-~~v~d~~~~~-~~~~--~~~~~~~~~~~~------~~~~~~~~~~~g~~~~ 71 (342)
.+..+|.+++|+|+ +++|++|+.++ +++||+.+++ .... .+...+..+.+. ++.+.++.++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~------ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS------ 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE------
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe------
Confidence 46679999999999 68999998777 6999998876 4333 344566666543 3455666555
Q ss_pred CCCCeEEEEECCCCc-EEEEEec-----CCceEEEE----EcCC--eEEEEE-CCeEEEEECCCCceeeEEeCCCCCceE
Q 019349 72 LSPRRLCLFNTTTGT-ALRELNF-----LTSILAVR----LNKK--RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGL 138 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~-~~~~~~~-----~~~v~~i~----~~~~--~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (342)
.|++|++||+.+++ .+..+.. ...+.++. ++++ .++++. ++.|++||+++++...... + ...+
T Consensus 137 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~--~~~v 212 (357)
T 3i2n_A 137 -RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN-I--KNGV 212 (357)
T ss_dssp -TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-C--SSCE
T ss_pred -CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC-C--CCce
Confidence 38999999999887 6666643 22788888 4444 344444 7899999999988755533 2 3457
Q ss_pred EEEeeCC---CccEEEEeCCCCccEEEEEEccCCceeEEEe-----cccCCeeEEEECCCCC-EEEEEeCCCcEEEEEEc
Q 019349 139 CAFSPSL---NACFLAVPASTTKGSVLVYNVMELHSHCEID-----AHQAPLAAIVLSSNGM-YIATASEQGTIIRVFLV 209 (342)
Q Consensus 139 ~~~~~~~---~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~-----~h~~~v~~i~~s~dg~-~lat~s~dg~~irlwd~ 209 (342)
.+++++| ++.++++++ .+|.|++||++++++...+. +|..+|++++|+|+++ +|++++.||. |++||+
T Consensus 213 ~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~ 289 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATS--LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWKY 289 (357)
T ss_dssp EEEEESCSSSSCCEEEEEE--STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEEE
T ss_pred EEEEcCCCCCCCCEEEEEC--CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEeec
Confidence 7778887 788888887 68999999998877655544 8999999999999998 8999999997 589999
Q ss_pred CCCe-------------------eEEEeccCcCceeEEEEEEecCCCcccEEE-EEeCCCcEEEEecCCCC
Q 019349 210 SEAT-------------------KSYSFRRGTYPSTIFSLSFGQSMQFQDILV-ATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 210 ~~~~-------------------~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~-~~s~dg~i~vwd~~~~~ 260 (342)
+++. .+..+.. +...|.+++|+|+++ +|+ +++.||.|+|||+.+.+
T Consensus 290 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~---~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 290 EYPIQRSKKDSEGIEMGVAGSVSLLQNVTL--STQPISSLDWSPDKR---GLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp ECCSCC--CCTTSCCCCCCCEEEEEEEEEC--CSSCEEEEEECSSST---TEEEEEETTSEEEEEEECC--
T ss_pred CCCcccccccCCCCccccccccceeecccc--CCCCeeEEEEcCCCC---eEEEEecCCCcEEEEECCCcc
Confidence 8643 4445543 355699999999998 787 89999999999998654
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.2e-28 Score=226.09 Aligned_cols=280 Identities=11% Similarity=0.058 Sum_probs=203.7
Q ss_pred CeEEEEEcCCCCEEE-EEcCCc-EEEEeCCCCcE------EEEEeeCCEEEEEEcC-CCCeEEEEcCCCCCCCCCCeEEE
Q 019349 9 PVFFVSFNQDNSGFA-LSTKDG-FKIFDSSTGRL------CYERAVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 9 ~V~~l~fs~d~~~la-~g~~~g-~~v~d~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
....++++|+...++ +|+.+| ++||++..... .+..|.+.+..+.+.+ +.+.+++++. |++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~-------dg~v~v 108 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE-------DCTVMV 108 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET-------TSEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC-------CCeEEE
Confidence 455789999887654 456555 79999865421 1334557788888887 6777777664 899999
Q ss_pred EECCCC-------cEEEEEe-cCCceEEEEEcCCe--EE-EEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCc
Q 019349 80 FNTTTG-------TALRELN-FLTSILAVRLNKKR--LV-IVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA 147 (342)
Q Consensus 80 wd~~~~-------~~~~~~~-~~~~v~~i~~~~~~--~~-~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (342)
||+.++ +++..+. +...|.+++|+++. ++ .++ |+.|++||+.+++.+..+....+...+.+++++|++
T Consensus 109 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 109 WEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG 188 (402)
T ss_dssp EECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS
T ss_pred EEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC
Confidence 999887 5566665 55689999999874 33 344 889999999999988888423344568888888899
Q ss_pred cEEEEeCCCCccEEEEEEccCCceeEEE-ecccCC-eeEEEECCCCCEEEEE---eCCCcEEEEEEcCCCee-EEEeccC
Q 019349 148 CFLAVPASTTKGSVLVYNVMELHSHCEI-DAHQAP-LAAIVLSSNGMYIATA---SEQGTIIRVFLVSEATK-SYSFRRG 221 (342)
Q Consensus 148 ~~l~~~~~~~~g~i~iwd~~~~~~~~~~-~~h~~~-v~~i~~s~dg~~lat~---s~dg~~irlwd~~~~~~-~~~~~~~ 221 (342)
.++++++ .||.|++||+++++.+..+ .+|... +.+++|+|+|++|++| +.|+. |++||+++++. +.....
T Consensus 189 ~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~- 264 (402)
T 2aq5_A 189 ALICTSC--RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQEL- 264 (402)
T ss_dssp SCEEEEE--TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEEC-
T ss_pred CEEEEEe--cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEec-
Confidence 9999888 6899999999999999888 788876 9999999999999999 78887 58999998764 333321
Q ss_pred cCceeEEEEEEecCCCcccEEE-EEeCCCcEEEEecCCCCCCCCCCCccccccccc--cccccccccccccceeeeccCC
Q 019349 222 TYPSTIFSLSFGQSMQFQDILV-ATSSSGSLHVFSPGFAINQRRGGRTSSILGSIL--PESVNEVLDPADHHVLRNAFPA 298 (342)
Q Consensus 222 ~~~~~v~~l~fs~d~~~~~~l~-~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 298 (342)
.+...+.+++|+|+++ +|+ +++.||+|++||++..++.. ..+..+. .......|+|.+
T Consensus 265 ~~~~~v~~~~~s~~~~---~l~~~g~~dg~i~i~d~~~~~~~~------~~l~~~~~~~~v~~~~~sp~~---------- 325 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTN---IVYLCGKGDSSIRYFEITSEAPFL------HYLSMFSSKESQRGMGYMPKR---------- 325 (402)
T ss_dssp CCCSSCEEEEEETTTT---EEEEEETTCSCEEEEEECSSTTCE------EEEEEECCSSCCSEEEECCGG----------
T ss_pred cCCCceeEEEEcCCCC---EEEEEEcCCCeEEEEEecCCCcce------EeecccccCCcccceEEeccc----------
Confidence 2344589999999998 776 55679999999998765311 0011111 111223444433
Q ss_pred CccccEEEEEEeCCcEEEEEEecCCC
Q 019349 299 GVKRASVSVITYNGYFVEYIFSINNC 324 (342)
Q Consensus 299 ~~~~~~l~~~~~dg~v~~~~~~~~~~ 324 (342)
..++ +.|+.+++|++.....
T Consensus 326 ----~~~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 326 ----GLEV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp ----GSCG--GGTEEEEEEEEETTEE
T ss_pred ----ccce--ecceeEEEEEcCCCcE
Confidence 3443 4677999999986443
No 94
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-27 Score=209.66 Aligned_cols=233 Identities=11% Similarity=0.126 Sum_probs=180.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC---cEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG---RLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
.+...|.+++|+|++++|++|+.++ +++|++... +..... +...+..+.+ +++.++..+. |+.|+
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-------d~~i~ 127 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSW-------DKTAK 127 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEET-------TSEEE
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeC-------CCCEE
Confidence 4578999999999999999998887 599997654 333333 3345555554 6677766654 89999
Q ss_pred EEECCCCcEEEEEe-cCCceEEEEEcC---CeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 79 LFNTTTGTALRELN-FLTSILAVRLNK---KRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 79 iwd~~~~~~~~~~~-~~~~v~~i~~~~---~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
+|| .++.+..+. +...+.++.+.+ +.+++++ |+.|++|| ..+....+.. .+...+.++++++++. ++++
T Consensus 128 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~-~~~~~i~~~~~~~~~~-~~~~ 201 (313)
T 3odt_A 128 VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSG-IHNDVVRHLAVVDDGH-FISC 201 (313)
T ss_dssp EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECS-SCSSCEEEEEEEETTE-EEEE
T ss_pred EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEec-cCcccEEEEEEcCCCe-EEEc
Confidence 999 566666665 455888888854 4555555 88999999 4455555554 1334566667777776 6666
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
+ .+|.|++||+++++.+..+.+|..+|++++|+|+| .|++++.||. |++||+++++.+..+..+ ...|.+++|+
T Consensus 202 ~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~~--~~~i~~~~~~ 275 (313)
T 3odt_A 202 S--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITLP--AISIWSVDCM 275 (313)
T ss_dssp E--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEECS--SSCEEEEEEC
T ss_pred c--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEecc--CceEEEEEEc
Confidence 6 58999999999999999999999999999999999 5999999997 589999999998888643 4569999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCCCC
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFAINQ 262 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~~~~ 262 (342)
|+++ +++++.||.|++||++..+..
T Consensus 276 ~~~~----~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 276 SNGD----IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp TTSC----EEEEETTSCEEEEESCGGGCC
T ss_pred cCCC----EEEEeCCCcEEEEeCCCCcee
Confidence 9997 567999999999999876543
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=5.2e-28 Score=220.05 Aligned_cols=234 Identities=13% Similarity=0.117 Sum_probs=182.9
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCCCcEEEEE-e---eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 5 SSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYER-A---VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 5 ~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
.+...|.+++|+| ++++|++|+.++ +++||+......... + ...+..+.+.++.+.++..+. |+.|+
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~ 188 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS-------TGRLL 188 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET-------TSEEE
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC-------CCCEE
Confidence 5788999999999 778899998877 699999865432221 1 144778888888888877664 89999
Q ss_pred EEECCCCcEEEEEe-cCCceEEEEEcCCe---EEEEE-CCeEEEEECCC----CceeeEEeCCCCCceEEEEeeCC-Ccc
Q 019349 79 LFNTTTGTALRELN-FLTSILAVRLNKKR---LVIVL-REKTYIYDANT----LAILDTIDTVPNLKGLCAFSPSL-NAC 148 (342)
Q Consensus 79 iwd~~~~~~~~~~~-~~~~v~~i~~~~~~---~~~~~-d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~ 148 (342)
+||+ +++++..+. +...|.+++|+++. ++.++ |+.|++||+++ +..+..+. +...+.+++++| ++.
T Consensus 189 i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 189 LLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP---HEKPVNAAYFNPTDST 264 (383)
T ss_dssp EEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE---CSSCEEEEEECTTTSC
T ss_pred EEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec---CCCceEEEEEcCCCCC
Confidence 9999 567777765 45689999999874 34444 88999999987 55666553 344678888888 888
Q ss_pred EEEEeCCCCccEEEEEEccCCceeEEEeccc-----------------CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 019349 149 FLAVPASTTKGSVLVYNVMELHSHCEIDAHQ-----------------APLAAIVLSSNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~-----------------~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~ 211 (342)
++++++ .||.|++||+++++....+..|. ..+..++|+|||++ +|+.||+ |++||+.+
T Consensus 265 ~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~-i~iwd~~~ 339 (383)
T 3ei3_B 265 KLLTTD--QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT-IDIYDANS 339 (383)
T ss_dssp EEEEEE--SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-EEEEETTT
T ss_pred EEEEEc--CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-EEEEecCC
Confidence 999887 58999999999988777776553 23445777777776 7788998 58999999
Q ss_pred CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 212 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
++.+..+..+.+...+.+++|+|+++ +|++++ ||+|+|||+++
T Consensus 340 ~~~~~~l~~~~~~~~~~~~~~s~~g~---~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 340 GGLVHQLRDPNAAGIISLNKFSPTGD---VLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCEEEEECBTTBCSCCCEEEECTTSS---EEEEEE-TTEEEEEECC-
T ss_pred CceeeeecCCCCCceEEEEEEecCcc---EEEEec-CCcEEEEecCC
Confidence 99999987544455678889999999 999997 99999999874
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=4.1e-27 Score=207.93 Aligned_cols=239 Identities=9% Similarity=0.090 Sum_probs=180.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
..+...|++++|+|++++|++|+.|+ +++||+.+++.+.....+......+.+.+..++..+. ++.+++|+.
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~-------~~~~~~~~~ 136 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSR-------SGHIHHHDV 136 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEET-------TSEEEEEET
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEec-------CCceEeeec
Confidence 35677899999999999999999887 6999999998887766655555666666777766554 899999998
Q ss_pred CCCcE-EEEEe-cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCcee----eEEeCCCCCceEEEEeeCCCcc-EE-E
Q 019349 83 TTGTA-LRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAIL----DTIDTVPNLKGLCAFSPSLNAC-FL-A 151 (342)
Q Consensus 83 ~~~~~-~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~l-~ 151 (342)
.++.. +..+. +...+..+.+.++. ++.+. |+.|++||+.+++.. .....+. ..+.++...++.. .+ .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ--GAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCC--SCEEEEEECTTSTTEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccC--CceEEEEecCCCCcEEEE
Confidence 77644 34443 45578888887764 33344 889999999876432 2222222 3344455444332 22 2
Q ss_pred EeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe--CCCcEEEEEEcCCCeeEEEeccCcCceeEEE
Q 019349 152 VPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFS 229 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s--~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~ 229 (342)
..+. .++.|++||.......... .|...+..+.|+|+++.+++++ .||+ |++||+++++++.++.. |...|++
T Consensus 215 ~~~~-~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~-i~iwd~~~~~~~~~l~g--H~~~V~~ 289 (318)
T 4ggc_A 215 GGGT-SDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLS 289 (318)
T ss_dssp EECT-TTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred EecC-CCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCE-EEEEECCCCcEEEEEcC--CCCCEEE
Confidence 3333 6899999999888766544 5677899999999999988765 7888 58999999999999864 3567999
Q ss_pred EEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 230 LSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 230 l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
|+|+||++ +|+++|.||+|+|||+...
T Consensus 290 l~~spdg~---~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 290 LTMSPDGA---TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECTTSS---CEEEEETTTEEEEECCSCC
T ss_pred EEEcCCCC---EEEEEecCCeEEEEECCCC
Confidence 99999999 9999999999999998654
No 97
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-29 Score=235.34 Aligned_cols=244 Identities=11% Similarity=0.059 Sum_probs=176.0
Q ss_pred CCCCeEEEEEcCC------CCEEEEEcCCc-EEEEeCCCCcE-------------EEEEeeCCEEEEEEcCCCCeEEEEc
Q 019349 6 SSYPVFFVSFNQD------NSGFALSTKDG-FKIFDSSTGRL-------------CYERAVGAFSIVEMLYSSSLLAIVG 65 (342)
Q Consensus 6 ~~~~V~~l~fs~d------~~~la~g~~~g-~~v~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (342)
+.+.|.+++|+|+ +.+||+|+.|+ +++||+..++. .+..+...+..+.+..+ +.++..+
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs 284 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGF 284 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEe
Confidence 4578999999997 57899998887 69999976531 12223356666776543 4544443
Q ss_pred CCCCCCCCCCeEEEEECCCCc-EEEEEe-cCCceEEE--EEcCCe--E-EEEE-CCeEEEEECCCCceeeEEeCCCCCce
Q 019349 66 AGEQPSLSPRRLCLFNTTTGT-ALRELN-FLTSILAV--RLNKKR--L-VIVL-REKTYIYDANTLAILDTIDTVPNLKG 137 (342)
Q Consensus 66 ~g~~~~~~d~~i~iwd~~~~~-~~~~~~-~~~~v~~i--~~~~~~--~-~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~ 137 (342)
.|++|++||+++++ +...+. +...|.++ .++++. + +.++ |++|+|||+++++.+..+..+.....
T Consensus 285 -------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 285 -------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp -------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred -------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 49999999998764 334444 55689999 456653 3 4444 89999999998877666654433223
Q ss_pred EEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe----
Q 019349 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT---- 213 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~---- 213 (342)
+.+++++|++..+++++ .|++|++||++++.++.++.+|.++|++|+|||+|++||+||.||+ |++||+..+.
T Consensus 358 v~~v~fsp~~~~l~s~~--~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~~~~~~ 434 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSD--GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARRLLHGI 434 (524)
T ss_dssp CCCEEEETTTTEEEEEC--SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSSTTTCC
T ss_pred ccceEeCCCcCeEEEeC--CCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHhhcccc
Confidence 44566777777888877 5899999999999988889999999999999999999999999998 5899864220
Q ss_pred ----------eEEEec-----------c----------C-------cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEe
Q 019349 214 ----------KSYSFR-----------R----------G-------TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 255 (342)
Q Consensus 214 ----------~~~~~~-----------~----------~-------~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd 255 (342)
.+..+. . + .+...|.+++|+|++....+||+|+.||+|+||+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 111110 0 0 1223589999999952112899999999999999
Q ss_pred cCCCC
Q 019349 256 PGFAI 260 (342)
Q Consensus 256 ~~~~~ 260 (342)
++...
T Consensus 515 l~~~~ 519 (524)
T 2j04_B 515 LSLEH 519 (524)
T ss_dssp CSCC-
T ss_pred ccccc
Confidence 87653
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-27 Score=213.99 Aligned_cols=248 Identities=10% Similarity=0.094 Sum_probs=183.5
Q ss_pred EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC--CCcEEEEEe-cCCceEEEEEcC----CeEEEEE-CC
Q 019349 42 YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALRELN-FLTSILAVRLNK----KRLVIVL-RE 113 (342)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~--~~~~~~~~~-~~~~v~~i~~~~----~~~~~~~-d~ 113 (342)
+..|...+..+.+.++++.+++++. |+.|++||+. +++.+..+. +...|.+++|++ +.++.++ |+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSS-------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ecCCcccEEEEEEcCCCCEEEEEEC-------CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 4556678888888888888877764 8999999997 445555665 456899999974 3455555 88
Q ss_pred eEEEEECCCCc--eeeEEeCCCCCceEEEEeeCCC--ccEEEEeCCCCccEEEEEEccCCc--eeEEEecccCCeeEEEE
Q 019349 114 KTYIYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELH--SHCEIDAHQAPLAAIVL 187 (342)
Q Consensus 114 ~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~h~~~v~~i~~ 187 (342)
.|++||+.+++ .+..+.. +...+.+++++|+ +.++++++ .||.|++||+.+.. ....+..|..+|++++|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EEEEEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEec--CCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 99999999886 4445443 3446777788877 78888887 68999999998874 34567789999999999
Q ss_pred CC-------------CCCEEEEEeCCCcEEEEEEcCCCee----EEEeccCcCceeEEEEEEecC---CCcccEEEEEeC
Q 019349 188 SS-------------NGMYIATASEQGTIIRVFLVSEATK----SYSFRRGTYPSTIFSLSFGQS---MQFQDILVATSS 247 (342)
Q Consensus 188 s~-------------dg~~lat~s~dg~~irlwd~~~~~~----~~~~~~~~~~~~v~~l~fs~d---~~~~~~l~~~s~ 247 (342)
+| ++.+|++++.||. |++||+++++. +..+. .+...|.+++|+|+ +. +|++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~~---~l~s~~~ 229 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRS---YLASVSQ 229 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSE---EEEEEET
T ss_pred cCccccccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEe--cccCcEeEEEECCCCCCCC---eEEEEeC
Confidence 99 7999999999998 58999987653 33443 23556999999999 77 9999999
Q ss_pred CCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 248 SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 248 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
||+|++||++........ . + .....+...+..+.+.++++.|++++.||.+++|+++..
T Consensus 230 dg~i~iwd~~~~~~~~~~----~-~-----------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKK----T-L-----------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp TSCEEEEEESSTTSCCEE----E-E-----------SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCEEEEEeCCCCCcccee----e-e-----------eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 999999999876432110 0 0 000001111122333445588999999999999999853
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-28 Score=244.16 Aligned_cols=245 Identities=12% Similarity=0.162 Sum_probs=186.8
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCC--cEEEE--EeeCCEEEEEEcCC--CCeEEEEcCCCCCCCCCC
Q 019349 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYE--RAVGAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 3 ~~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~--~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (342)
...|.++|++++|+|++++|++|+.+| +++||+.++ +.... .+.+.+..+.+.++ ++.+++++. |+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~-------Dg 77 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------DG 77 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET-------TS
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC-------CC
Confidence 457899999999999999999998887 699998744 33333 34467777888776 667776664 89
Q ss_pred eEEEEECCCCc--EEEEEe-cCCceEEEEEcCC----eEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCC--
Q 019349 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-- 145 (342)
Q Consensus 76 ~i~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-- 145 (342)
+|++||+.+++ .+..+. +...|.+++|+++ .+++++ |+.|++||+.++..........+...+.+++++|
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999999886 444444 4568999999876 344444 8899999998874332222223344677777777
Q ss_pred -----------CccEEEEeCCCCccEEEEEEccCC----ceeEEEecccCCeeEEEECCC---CCEEEEEeCCCcEEEEE
Q 019349 146 -----------NACFLAVPASTTKGSVLVYNVMEL----HSHCEIDAHQAPLAAIVLSSN---GMYIATASEQGTIIRVF 207 (342)
Q Consensus 146 -----------~~~~l~~~~~~~~g~i~iwd~~~~----~~~~~~~~h~~~v~~i~~s~d---g~~lat~s~dg~~irlw 207 (342)
++..+++++ .||.|++||++++ .....+.+|..+|++++|+|+ +++|++|+.||+ |++|
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iw 234 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIW 234 (753)
T ss_dssp ---------CGGGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEE
T ss_pred cccccccccCCCCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEe
Confidence 477888887 5899999999877 456678899999999999999 999999999998 5899
Q ss_pred EcCCCeeEE---EeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 208 LVSEATKSY---SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 208 d~~~~~~~~---~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
|+.+++... ......+...|.+++|+|+++ +|++++.||.|++|+++...
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~---~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC---CEEEECSSSCEECCBCCSSS
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCC---EEEEEcCCCEEEEEecCCCC
Confidence 999874211 111122355699999999999 99999999999999998543
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=8.3e-28 Score=222.83 Aligned_cols=233 Identities=12% Similarity=0.237 Sum_probs=185.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
+.+..+|.+++| ++++|++|+.++ +++||+.+++.+.....+.-.+..+.++++.++.++. |++|++||+
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~-------dg~i~vwd~ 240 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK-------DRSIAVWDM 240 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEET-------TSCEEEEEC
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeC-------CCcEEEEeC
Confidence 357889999999 788999998887 6999999998776665444444555566777666654 899999999
Q ss_pred CCCcEEE---EE-ecCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC
Q 019349 83 TTGTALR---EL-NFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (342)
Q Consensus 83 ~~~~~~~---~~-~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (342)
.+++.+. .+ .+...|.++.++++.+++++ |+.|++||+++++.+..+..+.. .+.+++++ +.++++++ .
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~--~~~l~~g~--~ 314 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR--DRLVVSGS--S 314 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEE--TTEEEEEE--T
T ss_pred CCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCC--cEEEEEeC--CCEEEEEe--C
Confidence 8877652 23 34558999999888888887 88999999999999999876554 45666664 45788877 6
Q ss_pred ccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe---------eEEEeccCcCceeEE
Q 019349 158 KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT---------KSYSFRRGTYPSTIF 228 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~---------~~~~~~~~~~~~~v~ 228 (342)
||.|++||+++++++..+.+|..+|.+++| ++++|++|+.||+ |++||+.+++ .+..+.. +...|.
T Consensus 315 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~ 389 (435)
T 1p22_A 315 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVF 389 (435)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCC
T ss_pred CCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeeccC--CCCCeE
Confidence 899999999999999999999999999999 7899999999998 5899997766 6677653 355699
Q ss_pred EEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 229 SLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
+++| ++. +|++++.||+|++||+.....
T Consensus 390 ~l~~--~~~---~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 390 RLQF--DEF---QIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CEEE--CSS---CEEECCSSSEEEEEC------
T ss_pred EEEe--CCC---EEEEEeCCCEEEEEECCCCCC
Confidence 9999 666 899999999999999987654
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=1.2e-27 Score=213.73 Aligned_cols=235 Identities=13% Similarity=0.108 Sum_probs=190.9
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEcCCc-EEEEeC-CCCcEEE-EE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 5 SSSYPVFFVSFNQDNS-GFALSTKDG-FKIFDS-STGRLCY-ER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~-~la~g~~~g-~~v~d~-~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
.+..+|.+++|+|+++ +|++|+.++ +++||+ .+++... .. +...+..+.+.+ .+.++.++. |+.|+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~-------d~~i~ 125 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASW-------DGLIE 125 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEET-------TSEEE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcC-------CCeEE
Confidence 4678999999999999 999998877 699999 8876532 23 456677788877 777776654 89999
Q ss_pred EEECCC---------CcEEEEEecCCceEEEEEcCCeEEEEE-CCeEEEEECCC-CceeeEEeCCCCCceEEEEeeCC-C
Q 019349 79 LFNTTT---------GTALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSPSL-N 146 (342)
Q Consensus 79 iwd~~~---------~~~~~~~~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 146 (342)
+||+++ ++++..+.+...|.+++++++.++++. ++.|++||+++ +..............+.+++++| +
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred EEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 999987 777777777789999999999977766 78999999988 65432222223445677888888 8
Q ss_pred ccEEEEeCCCCccEEEEEEccCC------ceeEEEecccC---------CeeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 019349 147 ACFLAVPASTTKGSVLVYNVMEL------HSHCEIDAHQA---------PLAAIVLSSNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~~------~~~~~~~~h~~---------~v~~i~~s~dg~~lat~s~dg~~irlwd~~~ 211 (342)
+.++++++ .+|.|++||+... +....+..|.. +|++++|+|++++|++++.||. |++||+.+
T Consensus 206 ~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~vwd~~~ 282 (342)
T 1yfq_A 206 QEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCWNLQT 282 (342)
T ss_dssp GCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEEEETTT
T ss_pred CCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EEEEcCcc
Confidence 88999888 5899999999876 77788888865 9999999999999999999998 58999999
Q ss_pred CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCc-EEEEec
Q 019349 212 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGS-LHVFSP 256 (342)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~-i~vwd~ 256 (342)
++.+..+..+ +...|.+++ |+++ +|++++.||+ .+.|..
T Consensus 283 ~~~~~~~~~~-h~~~v~~~~--~~~~---~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 283 RKKIKNFAKF-NEDSVVKIA--CSDN---ILCLATSDDTFKTNAAI 322 (342)
T ss_dssp TEEEEECCCC-SSSEEEEEE--ECSS---EEEEEEECTHHHHCSSS
T ss_pred HhHhhhhhcc-cCCCceEec--CCCC---eEEEEecCCcccccccc
Confidence 9999888543 256799999 9999 9999999999 666654
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.8e-27 Score=216.87 Aligned_cols=241 Identities=10% Similarity=0.111 Sum_probs=186.1
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCCCc-------E--EEEEeeCCEEEEEEcCCC-CeEEEEcCCCCCC
Q 019349 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGR-------L--CYERAVGAFSIVEMLYSS-SLLAIVGAGEQPS 71 (342)
Q Consensus 4 ~~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~~~-------~--~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 71 (342)
..+..+|++++|+| ++++|++|+.|+ +++||+.++. . .+..+...+..+.+.+++ +.++.++
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~------ 151 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG------ 151 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE------
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc------
Confidence 35788999999999 999999999887 6999998762 2 344455778888888876 4565555
Q ss_pred CCCCeEEEEECCCCcEEEEEe---cCCceEEEEEcCCe--EEEEE-CCeEEEEECCCCceeeEE-eCCCCCceEEEEeeC
Q 019349 72 LSPRRLCLFNTTTGTALRELN---FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTI-DTVPNLKGLCAFSPS 144 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~~~~~~~---~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~ 144 (342)
.|++|++||+.+++.+..+. +...|.+++|+++. +++++ |+.|++||+++++.+..+ ..+.. ..+..+.++
T Consensus 152 -~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (402)
T 2aq5_A 152 -CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG-TRPVHAVFV 229 (402)
T ss_dssp -TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS-SSCCEEEEC
T ss_pred -CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC-CcceEEEEc
Confidence 38999999999999998883 45689999998764 44444 889999999999988888 34433 234556677
Q ss_pred CCccEEEEe---CCCCccEEEEEEccCCce-eEEEe-cccCCeeEEEECCCCCEEEE-EeCCCcEEEEEEcCCCee-EEE
Q 019349 145 LNACFLAVP---ASTTKGSVLVYNVMELHS-HCEID-AHQAPLAAIVLSSNGMYIAT-ASEQGTIIRVFLVSEATK-SYS 217 (342)
Q Consensus 145 ~~~~~l~~~---~~~~~g~i~iwd~~~~~~-~~~~~-~h~~~v~~i~~s~dg~~lat-~s~dg~~irlwd~~~~~~-~~~ 217 (342)
+++.+++++ + .++.|++||+++++. +.... .|...|.+++|+|++++|++ |+.||. |++||+.+++. +..
T Consensus 230 ~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 230 SEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFLHY 306 (402)
T ss_dssp STTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCEEE
T ss_pred CCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcceEe
Confidence 888888887 4 589999999988764 33333 57788999999999999975 557987 58999998874 444
Q ss_pred eccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 218 FRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 218 ~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+....+...|.+++|+|++. +++ +.++.+++|++....
T Consensus 307 l~~~~~~~~v~~~~~sp~~~---~~~--s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 307 LSMFSSKESQRGMGYMPKRG---LEV--NKCEIARFYKLHERK 344 (402)
T ss_dssp EEEECCSSCCSEEEECCGGG---SCG--GGTEEEEEEEEETTE
T ss_pred ecccccCCcccceEEecccc---cce--ecceeEEEEEcCCCc
Confidence 43333346799999999998 665 456799999997653
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=8e-27 Score=205.03 Aligned_cols=272 Identities=10% Similarity=0.082 Sum_probs=177.2
Q ss_pred CeEEEEEcCCCC---EEEEEcCCcEEEEeCCCC---cEEEEEeeCCEEEEEEcCCC---CeEEEEcCCCCC--------C
Q 019349 9 PVFFVSFNQDNS---GFALSTKDGFKIFDSSTG---RLCYERAVGAFSIVEMLYSS---SLLAIVGAGEQP--------S 71 (342)
Q Consensus 9 ~V~~l~fs~d~~---~la~g~~~g~~v~d~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~--------~ 71 (342)
.+.++.|-..|- +++++++..+++|+...+ ++++..+.+.+.+..+.+.+ +.+.++-|.-.. .
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 356666665554 788999999999999888 78888888776666665544 333222211000 0
Q ss_pred CCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEEE----CCeEEEEEC-CCCceeeEEeCCCCCceEEEEee-CC
Q 019349 72 LSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL----REKTYIYDA-NTLAILDTIDTVPNLKGLCAFSP-SL 145 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~----d~~i~i~d~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 145 (342)
.+|+.+..|.+..+ +...|.+ +...+++..+ |+.|++|++ .+++.+..+..+.....++++++ .+
T Consensus 121 pd~~~~~~~l~s~g-------~~~~v~~--l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 121 SDDESEKQVLLKSG-------NIKAVLG--LTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp -----CCEEEEEEE-------EEEEEEE--ETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred CCccccccEEEeCC-------CeEEEEe--cCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 01122222222111 1112333 2334444442 789999999 55888888877777778888888 56
Q ss_pred CccEEEEeCCCCccEEEEEEccCCceeEEEeccc---CCeeEEEECCCCCEE------------EEEeCCCcEEEEEEcC
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQ---APLAAIVLSSNGMYI------------ATASEQGTIIRVFLVS 210 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~---~~v~~i~~s~dg~~l------------at~s~dg~~irlwd~~ 210 (342)
++..|++++ .|++|+|||+.++++++++.+|. ..+.+++|+|||.++ ++|+.|++ ||+||..
T Consensus 192 ~~~~LaSgS--~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~ 268 (356)
T 2w18_A 192 MQEALLGTT--IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPK 268 (356)
T ss_dssp STTEEEEEE--TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETT
T ss_pred CCceEEEec--CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECC
Confidence 778999888 69999999999999999998754 367788999999987 66788887 5899999
Q ss_pred CCeeEEEec----cCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccc-cccc
Q 019349 211 EATKSYSFR----RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVN-EVLD 285 (342)
Q Consensus 211 ~~~~~~~~~----~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 285 (342)
+++.+..+. .++ ...+.+..++ +. ++|+++.|++|+|||+++++...+ +.++....+. ..|+
T Consensus 269 tgk~l~v~~~~~p~Gh-~~~~lsg~~s--g~---~lASgS~DgTIkIWDl~tGk~l~t-------L~gH~~~vvs~vafS 335 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQ-AGRFLEGDVK--DH---CAAAILTSGTIAIWDLLLGQCTAL-------LPPVSDQHWSFVKWS 335 (356)
T ss_dssp TTEEEEEEEECCCTTC-CCCEEEEEEE--TT---EEEEEETTSCEEEEETTTCSEEEE-------ECCC--CCCCEEEEC
T ss_pred CCEEEEEEEeeccCCC-cceeEccccC--CC---EEEEEcCCCcEEEEECCCCcEEEE-------ecCCCCCeEEEEEEC
Confidence 998876542 222 2234344443 77 899999999999999988765332 1111111121 2354
Q ss_pred ccccceeeeccCCCccccEEEEEEeCCcEEEEEE
Q 019349 286 PADHHVLRNAFPAGVKRASVSVITYNGYFVEYIF 319 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~ 319 (342)
| ++++|++++.||+|++|++
T Consensus 336 P--------------DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 336 G--------------TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp S--------------SSSEEEEECTTSCEEEEEE
T ss_pred C--------------CCCEEEEEECCCcEEEecC
Confidence 4 4489999999999999985
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=1.2e-26 Score=206.49 Aligned_cols=266 Identities=12% Similarity=0.077 Sum_probs=185.6
Q ss_pred EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc----EEEEEe-cCCceEEEEEcC----CeEEEEE-
Q 019349 42 YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT----ALRELN-FLTSILAVRLNK----KRLVIVL- 111 (342)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~----~~~~~~-~~~~v~~i~~~~----~~~~~~~- 111 (342)
...|.+.+..+.+.++++.++.++. |++|++||+.++. .+..+. +...|.+++|++ +.++.++
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSS-------DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEET-------TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CcccccceeEEEEcCCCCEEEEeeC-------CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence 4456678888888888888877764 8999999998763 444444 456899999986 2344444
Q ss_pred CCeEEEEECCCC---------ceeeEEeCCCCCceEEEEeeCCC--ccEEEEeCCCCccEEEEEEccCCceeEEEe----
Q 019349 112 REKTYIYDANTL---------AILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHSHCEID---- 176 (342)
Q Consensus 112 d~~i~i~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~---- 176 (342)
|+.|++||+.++ +.+..+..+ ...+.+++++|+ +.++++++ .||.|++||+++++.+..+.
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~ 155 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDS--KGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALEPSDLRSWTLTSE 155 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSSTTCTTCCEEEEE
T ss_pred CCeEEEEecCCCcccccccCcceeeeeccc--CCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCChHHhcccccccc
Confidence 889999999876 445555544 345777778887 88898888 68999999998877554332
Q ss_pred ---------cccCCeeEEEECCC---CCEEEEEeCCCcEEEEEEcCCCee--EEEeccCcCceeEEEEEEecCC----Cc
Q 019349 177 ---------AHQAPLAAIVLSSN---GMYIATASEQGTIIRVFLVSEATK--SYSFRRGTYPSTIFSLSFGQSM----QF 238 (342)
Q Consensus 177 ---------~h~~~v~~i~~s~d---g~~lat~s~dg~~irlwd~~~~~~--~~~~~~~~~~~~v~~l~fs~d~----~~ 238 (342)
.|...+.+++|+|+ +.+|++++.|+.+ .+|+...++. +..+. .+...|.+++|+|++ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~~~- 231 (351)
T 3f3f_A 156 MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAI-IYQRGKDGKLHVAAKLP--GHKSLIRSISWAPSIGRWYQ- 231 (351)
T ss_dssp EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEE-EEEECTTSCEEEEEECC--CCCSCEEEEEECCCSSCSSE-
T ss_pred ccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcE-EEEccCCCceeeeeecC--CCCcceeEEEECCCCCCcce-
Confidence 68889999999997 9999999999975 5788777765 44443 345679999999998 7
Q ss_pred ccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccc--------ccc--------ccc---------cccccccccceee
Q 019349 239 QDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGS--------ILP--------ESV---------NEVLDPADHHVLR 293 (342)
Q Consensus 239 ~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------~~~--------~~~---------~~~~~~~~~~~~~ 293 (342)
+|++++.||+|++||++................. ... ... ..+.....|...+
T Consensus 232 --~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 232 --LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp --EEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred --EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 8999999999999999875432211000000000 000 000 0111112233344
Q ss_pred eccCCCccccEEEEEEeCCcEEEEEEecCCC
Q 019349 294 NAFPAGVKRASVSVITYNGYFVEYIFSINNC 324 (342)
Q Consensus 294 ~~~~~~~~~~~l~~~~~dg~v~~~~~~~~~~ 324 (342)
..+.+.++++.|++++.||.|++|+++..+.
T Consensus 310 ~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 5566677778999999999999999876443
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=4.9e-27 Score=211.96 Aligned_cols=243 Identities=10% Similarity=0.063 Sum_probs=185.3
Q ss_pred EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc--EEEEEe-cCCceEEEEEcCCe--EEEEE-CCeE
Q 019349 42 YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT--ALRELN-FLTSILAVRLNKKR--LVIVL-REKT 115 (342)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~~--~~~~~-d~~i 115 (342)
+..+...+..+.+.++++.+++.+. ++.|++||+.+++ .+..+. +...|.+++|+++. ++.++ |+.|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPN-------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECS-------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeC-------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 4445577888888888888877654 8999999999887 677765 45689999998764 44444 7899
Q ss_pred EEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce---eEEE-ecccCCeeEEEECCCC
Q 019349 116 YIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS---HCEI-DAHQAPLAAIVLSSNG 191 (342)
Q Consensus 116 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~---~~~~-~~h~~~v~~i~~s~dg 191 (342)
++||+.+++....+....+...+.++++++++.++++++ .+|.|++||+...+. ...+ ..|...|++++|+|++
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE--TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 999999887666665555566788888999999999988 589999999988763 3333 5789999999999999
Q ss_pred CEEEEEeCCCcEEEEEEc------------------CCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEE
Q 019349 192 MYIATASEQGTIIRVFLV------------------SEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHV 253 (342)
Q Consensus 192 ~~lat~s~dg~~irlwd~------------------~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~v 253 (342)
++|++++.||. |++||+ ..++.+..+.. +...|.+++|+|++. +|++++.||+|++
T Consensus 155 ~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~---~l~~~~~d~~i~i 228 (372)
T 1k8k_C 155 VLLAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS--SCGWVHGVCFSANGS---RVAWVSHDSTVCL 228 (372)
T ss_dssp SEEEEEETTSC-EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC--CSSCEEEEEECSSSS---EEEEEETTTEEEE
T ss_pred CEEEEEcCCCC-EEEEEcccccccccccccccccccchhhheEecCC--CCCeEEEEEECCCCC---EEEEEeCCCEEEE
Confidence 99999999998 589995 46777777753 355699999999999 9999999999999
Q ss_pred EecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 254 FSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
||++..+.... +...........|+| ++. +++++.||.+++|++..
T Consensus 229 ~d~~~~~~~~~-------~~~~~~~v~~~~~~~--------------~~~-~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 229 ADADKKMAVAT-------LASETLPLLAVTFIT--------------ESS-LVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEGGGTTEEEE-------EECSSCCEEEEEEEE--------------TTE-EEEEETTSSCEEEEEET
T ss_pred EECCCCceeEE-------EccCCCCeEEEEEec--------------CCC-EEEEEeCCeEEEEEccC
Confidence 99987654321 111111111223333 324 45555999999999987
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-27 Score=211.68 Aligned_cols=223 Identities=9% Similarity=0.077 Sum_probs=165.1
Q ss_pred CCCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEEE-CCeEEEEECC---------CCceeeEEeCCCCCceEEEEe
Q 019349 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDAN---------TLAILDTIDTVPNLKGLCAFS 142 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~---------~~~~~~~~~~~~~~~~~~~~~ 142 (342)
.|++|++||+.+++.+..+. ...|.++.+++. ++.++ |++|++|+.. +++.++.+... +...+.+++
T Consensus 56 ~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 132 (343)
T 3lrv_A 56 EDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD-SANEIIYMY 132 (343)
T ss_dssp ETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC-CSSCEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC-CCCCEEEEE
Confidence 49999999999999888776 346777778887 44444 7889888655 55555555432 234678888
Q ss_pred eCC--CccEEEEeCCCCccEEEEEEccCCceeEEEe-cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeE-EEe
Q 019349 143 PSL--NACFLAVPASTTKGSVLVYNVMELHSHCEID-AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKS-YSF 218 (342)
Q Consensus 143 ~~~--~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~-~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~-~~~ 218 (342)
++| ++.++++++ .||+|++||+++++.+.... .|..+|++++|+|+|.+||+|+.||+ |++||+++++.+ ..+
T Consensus 133 ~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~-i~iwd~~~~~~~~~~~ 209 (343)
T 3lrv_A 133 GHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI-LDVYNLSSPDQASSRF 209 (343)
T ss_dssp CCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC-EEEEESSCTTSCCEEC
T ss_pred cCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE-EEEEECCCCCCCccEE
Confidence 888 889999888 68999999999998876664 45668999999999999999999998 589999999887 677
Q ss_pred ccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCC
Q 019349 219 RRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPA 298 (342)
Q Consensus 219 ~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (342)
.. .+...|.+++|+|++. +|++++ |++|++||++..+.......... ...+ .. . ..+.+
T Consensus 210 ~~-~h~~~v~~l~fs~~g~---~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~---~~~~--~~---~--------~~~~~ 268 (343)
T 3lrv_A 210 PV-DEEAKIKEVKFADNGY---WMVVEC-DQTVVCFDLRKDVGTLAYPTYTI---PEFK--TG---T--------VTYDI 268 (343)
T ss_dssp CC-CTTSCEEEEEECTTSS---EEEEEE-SSBEEEEETTSSTTCBSSCCCBC----------C---C--------EEEEE
T ss_pred ec-cCCCCEEEEEEeCCCC---EEEEEe-CCeEEEEEcCCCCcceeeccccc---cccc--cc---c--------eEEEE
Confidence 54 2456799999999999 999999 45999999988765432111000 0000 00 0 11233
Q ss_pred CccccEEEEEEe-CCcEEEEEEecC
Q 019349 299 GVKRASVSVITY-NGYFVEYIFSIN 322 (342)
Q Consensus 299 ~~~~~~l~~~~~-dg~v~~~~~~~~ 322 (342)
.+.+.+|++++. |+.+++|+++..
T Consensus 269 ~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 269 DDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCCCEEEEecCCCCcEEEEEEccc
Confidence 444589999999 999999998643
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.5e-25 Score=200.97 Aligned_cols=237 Identities=12% Similarity=0.088 Sum_probs=190.2
Q ss_pred CCCeEEEEEcCCCCEE-EEEcCCc-EEEEeCCCCcEEEEEee-CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 7 SYPVFFVSFNQDNSGF-ALSTKDG-FKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~l-a~g~~~g-~~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
...+.+++|+|++++| ++++.++ +++||+.+++.+..... ..+..+.+.++++.+++++. .+++|++||+.
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~------~~~~v~v~d~~ 104 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM------ASSTLSVIDTT 104 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET------TTTEEEEEETT
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC------CCCEEEEEECC
Confidence 3468999999999987 5665554 79999999987765543 46667788888888877765 47999999999
Q ss_pred CCcEEEEEecCCceEEEEEcCCe--EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCcc
Q 019349 84 TGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (342)
Q Consensus 84 ~~~~~~~~~~~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 159 (342)
+++.+..+.....+.+++++++. ++++. ++.|++||+.+++.+..+..+.. ...++++|++..+++++. .++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~dg~~l~~~~~-~~~ 180 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS---PKGIAVTPDGTKVYVANF-DSM 180 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS---EEEEEECTTSSEEEEEET-TTT
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC---cceEEECCCCCEEEEEeC-CCC
Confidence 99999888888889999998874 43444 78999999999998888876433 466777888877754443 589
Q ss_pred EEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe---CCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCC
Q 019349 160 SVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS---EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSM 236 (342)
Q Consensus 160 ~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s---~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~ 236 (342)
.|++||+++++.+..+. |...+.+++|+|+|++|++++ .++. |++||+.+++.+..+..+ ..+.+++|+|++
T Consensus 181 ~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg 255 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPVG---PDPAGIAVTPDG 255 (391)
T ss_dssp EEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEECC---SSEEEEEECTTS
T ss_pred EEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEecC---CCccEEEEccCC
Confidence 99999999998877775 456789999999999999988 5776 589999999988877543 247889999999
Q ss_pred CcccEE-EEEeCCCcEEEEecCCCCC
Q 019349 237 QFQDIL-VATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 237 ~~~~~l-~~~s~dg~i~vwd~~~~~~ 261 (342)
+ +| ++++.|++|++||+++.+.
T Consensus 256 ~---~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 256 K---KVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp S---EEEEEETTTTEEEEEETTTTEE
T ss_pred C---EEEEEcCCCCEEEEEECCCCcE
Confidence 8 66 6678899999999987654
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=9.4e-27 Score=204.59 Aligned_cols=176 Identities=12% Similarity=0.069 Sum_probs=131.5
Q ss_pred CCCeEEEEEC-CCCcEEEEEec-CCceEEEEEcC-----CeEEEEE-CCeEEEEECCCCceeeEEeCCCC-CceEEEEee
Q 019349 73 SPRRLCLFNT-TTGTALRELNF-LTSILAVRLNK-----KRLVIVL-REKTYIYDANTLAILDTIDTVPN-LKGLCAFSP 143 (342)
Q Consensus 73 ~d~~i~iwd~-~~~~~~~~~~~-~~~v~~i~~~~-----~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~ 143 (342)
.+++|++|++ .+|+.+..+.. ...+..++|++ +.++.++ |++|+|||+.++++++++..+.. ...++++++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 5899999999 45887776554 34666666655 3444445 89999999999999999975443 345555566
Q ss_pred CCCccEEEE-----------eCCCCccEEEEEEccCCceeEEE-----ecccCCeeEEEECCCCCEEEEEeCCCcEEEEE
Q 019349 144 SLNACFLAV-----------PASTTKGSVLVYNVMELHSHCEI-----DAHQAPLAAIVLSSNGMYIATASEQGTIIRVF 207 (342)
Q Consensus 144 ~~~~~~l~~-----------~~~~~~g~i~iwd~~~~~~~~~~-----~~h~~~v~~i~~s~dg~~lat~s~dg~~irlw 207 (342)
+|++.++++ +|+ .|++|++||..+++.+..+ .+|...+.+..++ +.++|+|+.||+ ||||
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs-~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT-IkIW 310 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRS-PVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGT-IAIW 310 (356)
T ss_dssp EETTEEEEEEC-------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSC-EEEE
T ss_pred CCCCCEEEEeccCCCcceeeccC-CCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCc-EEEE
Confidence 667766632 233 6899999999999887665 3676665544444 889999999998 5999
Q ss_pred EcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEec
Q 019349 208 LVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSP 256 (342)
Q Consensus 208 d~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~ 256 (342)
|+.+|+.+.++..+ ....+.+++||||++ +|++|+.|++|+|||+
T Consensus 311 Dl~tGk~l~tL~gH-~~~vvs~vafSPDG~---~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 311 DLLLGQCTALLPPV-SDQHWSFVKWSGTDS---HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTTCSEEEEECCC---CCCCEEEECSSSS---EEEEECTTSCEEEEEE
T ss_pred ECCCCcEEEEecCC-CCCeEEEEEECCCCC---EEEEEECCCcEEEecC
Confidence 99999999998643 222345689999999 9999999999999996
No 109
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=3.1e-28 Score=220.87 Aligned_cols=239 Identities=14% Similarity=0.139 Sum_probs=169.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCc---EEEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeE
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR---LCYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i 77 (342)
..+..+|.+++|+|++++|++|+.++ +++||+.+++ .... .+...+..+.+.++++.++.++. |++|
T Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i 124 (377)
T 3dwl_C 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG-------ARVI 124 (377)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES-------SSCE
T ss_pred ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec-------CCeE
Confidence 46788999999999999999998876 7999998876 3332 34467777788777777777764 8999
Q ss_pred EEEECCCCcE---EEEEe--cCCceEEEEEcCCe--EEEEE-CCeEEEEECCC------------------CceeeEEeC
Q 019349 78 CLFNTTTGTA---LRELN--FLTSILAVRLNKKR--LVIVL-REKTYIYDANT------------------LAILDTIDT 131 (342)
Q Consensus 78 ~iwd~~~~~~---~~~~~--~~~~v~~i~~~~~~--~~~~~-d~~i~i~d~~~------------------~~~~~~~~~ 131 (342)
++||+.+++. ...+. +...|.+++|+++. ++.++ |+.|++||+.. ++++..+
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-- 202 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--
Confidence 9999998873 55555 56689999999875 33344 88999999853 2233333
Q ss_pred CCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce----eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEE
Q 019349 132 VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS----HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVF 207 (342)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~----~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlw 207 (342)
.+...+.+++++|++.+|++++ .||.|++||+.+++. +..+.+|..+|.+++|+|+|++|++|+.++ ++ +|
T Consensus 203 -~~~~~v~~~~~sp~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~-~~ 277 (377)
T 3dwl_C 203 -PSGGWVHAVGFSPSGNALAYAG--HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PI-LL 277 (377)
T ss_dssp -CCSSSEEEEEECTTSSCEEEEE--TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EE-EE
T ss_pred -cCCceEEEEEECCCCCEEEEEe--CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EE-EE
Confidence 3445688888899999999888 689999999999887 788899999999999999999999998776 44 67
Q ss_pred EcCCCe-e--------------------------E---------EEec--------------cCcCceeEEEEEEecCCC
Q 019349 208 LVSEAT-K--------------------------S---------YSFR--------------RGTYPSTIFSLSFGQSMQ 237 (342)
Q Consensus 208 d~~~~~-~--------------------------~---------~~~~--------------~~~~~~~v~~l~fs~d~~ 237 (342)
+...+. . . ..+. ...|...|.++++.++..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~ 357 (377)
T 3dwl_C 278 QGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTP 357 (377)
T ss_dssp CCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEET
T ss_pred EeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCC
Confidence 665221 0 0 0010 001445699999776553
Q ss_pred c-ccEEEEEeCCCcEEEEec
Q 019349 238 F-QDILVATSSSGSLHVFSP 256 (342)
Q Consensus 238 ~-~~~l~~~s~dg~i~vwd~ 256 (342)
. ...|++++.||+|+|||+
T Consensus 358 ~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 358 GNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp TEEEEEEEEETTSEEEEECC
T ss_pred CceEEEEeecCCCcEEEecC
Confidence 0 014999999999999985
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=215.21 Aligned_cols=253 Identities=13% Similarity=0.116 Sum_probs=174.9
Q ss_pred eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc-----------EEEEEec-C------------CceEEEE
Q 019349 46 VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT-----------ALRELNF-L------------TSILAVR 101 (342)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~-----------~~~~~~~-~------------~~v~~i~ 101 (342)
.+.+..+.+.++++++++.+. |+.|++||+.+++ ....+.. . ..|.+++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~-------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDK-------GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEET-------TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cCcEEEEEECCCCCEEEEEcC-------CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 467888899888888887764 8999999998876 3555543 3 6799999
Q ss_pred EcCCe----EEEEE-CCeEEEEECCCCceee---------------------------------------EEeCCCCCce
Q 019349 102 LNKKR----LVIVL-REKTYIYDANTLAILD---------------------------------------TIDTVPNLKG 137 (342)
Q Consensus 102 ~~~~~----~~~~~-d~~i~i~d~~~~~~~~---------------------------------------~~~~~~~~~~ 137 (342)
|+++. ++.++ |+.|++||+.+++... .+ ...+...
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~ 179 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF-ANAHTYH 179 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE-CSCCSSC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe-ccCCCcc
Confidence 99874 44444 8899999997643311 11 1234455
Q ss_pred EEEEeeCCCccEEEEeCCCCccEEEEEEccC-CceeE-------EEecccCCeeEEEECCCC-CEEEEEeCCCcEEEEEE
Q 019349 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVME-LHSHC-------EIDAHQAPLAAIVLSSNG-MYIATASEQGTIIRVFL 208 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~-~~~~~-------~~~~h~~~v~~i~~s~dg-~~lat~s~dg~~irlwd 208 (342)
+.+++++|++.+++++ . ||.|++||+.+ .+.+. .+.+|...|++++|+|++ ++|++|+.||+ |++||
T Consensus 180 v~~~~~~~~~~~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-i~iwd 255 (447)
T 3dw8_B 180 INSISINSDYETYLSA-D--DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-IRLCD 255 (447)
T ss_dssp CCEEEECTTSSEEEEE-C--SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC-EEEEE
T ss_pred eEEEEEcCCCCEEEEe-C--CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe-EEEEE
Confidence 7778888888899886 3 89999999984 34444 256899999999999999 99999999998 58999
Q ss_pred cCCCee----EEEeccCcCc----------eeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC-CCCCCCCCCcccccc
Q 019349 209 VSEATK----SYSFRRGTYP----------STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF-AINQRRGGRTSSILG 273 (342)
Q Consensus 209 ~~~~~~----~~~~~~~~~~----------~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~ 273 (342)
+++++. +..+..+..+ ..|.+++|+|+++ +|++++. ++|+|||++. .........+.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR---YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS---EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred CcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC---EEEEeeC-CeEEEEeCCCCccccceeeccccccc
Confidence 999886 5666533210 2699999999999 9999999 9999999986 443332111111000
Q ss_pred ccccc-cccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 274 SILPE-SVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 274 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
..... ...++++ ...+.+.+++++|++++.||.|++|++..
T Consensus 332 ~l~~~~~~~~i~~-------~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 332 KLCSLYENDCIFD-------KFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp THHHHHHTSGGGC-------CCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ccccccccccccc-------ceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 00000 0000000 01123344558999999999999998654
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1e-25 Score=205.20 Aligned_cols=262 Identities=10% Similarity=0.096 Sum_probs=196.8
Q ss_pred CEEEEEcCCc-EEEEeCCCCcEEEEEee-CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCce
Q 019349 20 SGFALSTKDG-FKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSI 97 (342)
Q Consensus 20 ~~la~g~~~g-~~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v 97 (342)
..+++++.++ +++||+.+++.+..... ..+..+.+.++++.+++.+. .+++|++||+.+++.+..+..+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~d~~i~v~d~~~~~~~~~~~~~~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANA------HSNDVSIIDTATNNVIATVPAGSSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECC------CCCeEEEEECCCCeEEEEEECCCCc
Confidence 3467777666 69999999987665443 45667778788887766654 3899999999999999999888899
Q ss_pred EEEEEcCCe--EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeE
Q 019349 98 LAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHC 173 (342)
Q Consensus 98 ~~i~~~~~~--~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~ 173 (342)
.+++++++. ++++. ++.|++||+.+++.+..+..+. .+.++++++++..+++++. .++.|++||+.+++.+.
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---SPLGLALSPDGKKLYVTNN-GDKTVSVINTVTKAVIN 152 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---CcceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEE
Confidence 999999864 44444 5899999999998888876543 3567788888887754443 58999999999999888
Q ss_pred EEecccCCeeEEEECCCCCEE-EEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEe---CCC
Q 019349 174 EIDAHQAPLAAIVLSSNGMYI-ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS---SSG 249 (342)
Q Consensus 174 ~~~~h~~~v~~i~~s~dg~~l-at~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s---~dg 249 (342)
.+..|. .+.+++|+|+|++| ++++.|++ |++||+++++.+..+.. ...+.+++|+|+++ +|++++ .++
T Consensus 153 ~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~---~l~~~~~~~~~~ 224 (391)
T 1l0q_A 153 TVSVGR-SPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGT---KAYVTNVDKYFN 224 (391)
T ss_dssp EEECCS-SEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEEC---SSEEEEEEECTTSS---EEEEEEECSSCC
T ss_pred EEecCC-CcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEec---CCCccceEECCCCC---EEEEEecCcCCC
Confidence 887764 46999999999988 56677776 58999999988777642 34588999999998 888887 689
Q ss_pred cEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEE-EEEEeCCcEEEEEEec
Q 019349 250 SLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASV-SVITYNGYFVEYIFSI 321 (342)
Q Consensus 250 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg~v~~~~~~~ 321 (342)
.|++||+++.+.... +... .......|+| ++++| ++++.||.+++|++..
T Consensus 225 ~v~~~d~~~~~~~~~-------~~~~-~~~~~~~~s~--------------dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 225 TVSMIDTGTNKITAR-------IPVG-PDPAGIAVTP--------------DGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEETTTTEEEEE-------EECC-SSEEEEEECT--------------TSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEECCCCeEEEE-------EecC-CCccEEEEcc--------------CCCEEEEEcCCCCEEEEEECCC
Confidence 999999987643221 0000 0011123343 44667 4556799999997643
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=5.2e-26 Score=207.48 Aligned_cols=244 Identities=17% Similarity=0.137 Sum_probs=180.9
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCCCcEEEEEe-eCCEEEEEEcCCCC---eEEEEcCCCCCCCCCCeEE
Q 019349 5 SSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSS---LLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 5 ~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~g~~~~~~d~~i~ 78 (342)
.+..+|.+++|+| ++.+|++++.++ +++||+.+++...... ...+..+.+.+... .++..+ .++.|+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~ 169 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT-------RGPKVQ 169 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE-------SSSSEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc-------CCCeEE
Confidence 4788999999999 777899888776 6999999987765543 35566666665432 555444 489999
Q ss_pred EEECCCCcEEEEEe-cCCceEEEEEcCCe---EEEEE-CCeEEEEECCCCc-eeeEEeC-------------CCCCceEE
Q 019349 79 LFNTTTGTALRELN-FLTSILAVRLNKKR---LVIVL-REKTYIYDANTLA-ILDTIDT-------------VPNLKGLC 139 (342)
Q Consensus 79 iwd~~~~~~~~~~~-~~~~v~~i~~~~~~---~~~~~-d~~i~i~d~~~~~-~~~~~~~-------------~~~~~~~~ 139 (342)
+||+.+++.+..+. +...|.+++++++. ++.+. |+.|++||++++. .+..+.. ..+...+.
T Consensus 170 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (408)
T 4a11_B 170 LCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN 249 (408)
T ss_dssp EEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE
T ss_pred EEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCcee
Confidence 99999999888876 45689999999875 33444 8899999998764 3333321 12345678
Q ss_pred EEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecc-----cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCee
Q 019349 140 AFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAH-----QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK 214 (342)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h-----~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~ 214 (342)
+++++|++.++++++ .||.|++||+.+++....+..+ ...+........+..+++++.|+. |++||+.+++.
T Consensus 250 ~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~d~~~~~~ 326 (408)
T 4a11_B 250 GLCFTSDGLHLLTVG--TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGST-IAVYTVYSGEQ 326 (408)
T ss_dssp EEEECTTSSEEEEEE--TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTE-EEEEETTTCCE
T ss_pred EEEEcCCCCEEEEec--CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCE-EEEEECcCCcc
Confidence 888899999999888 5899999999988765444322 122233333344566777777887 58999999999
Q ss_pred EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCC
Q 019349 215 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQR 263 (342)
Q Consensus 215 ~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 263 (342)
+..+..+ ...|.+++|+|+++ +|++++.||.|++||++..+...
T Consensus 327 ~~~~~~~--~~~v~~~~~s~~~~---~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 327 ITMLKGH--YKTVDCCVFQSNFQ---ELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEECCC--SSCEEEEEEETTTT---EEEEEETTSCEEEEEECC-----
T ss_pred eeeeccC--CCeEEEEEEcCCCC---EEEEECCCCeEEEEeCCCCCccC
Confidence 9988643 56799999999999 99999999999999999876543
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.6e-26 Score=213.95 Aligned_cols=239 Identities=12% Similarity=0.123 Sum_probs=181.4
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEcCCc-EEEEeCCC----------CcEE--EEEeeCCEEEEEEcCCCC-eEEEEcCCCC
Q 019349 5 SSSYPVFFVSFNQD-NSGFALSTKDG-FKIFDSST----------GRLC--YERAVGAFSIVEMLYSSS-LLAIVGAGEQ 69 (342)
Q Consensus 5 ~~~~~V~~l~fs~d-~~~la~g~~~g-~~v~d~~~----------~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~g~~ 69 (342)
.+...|++++|+|+ +.+|++|+.+| +++|++.+ .+.. +..+...+..+.+.+... .++.++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---- 201 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS---- 201 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC----
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe----
Confidence 45678999999998 67889998887 79999875 3333 334455666778877766 554443
Q ss_pred CCCCCCeEEEEECCCCcE-------EEEE-ecCCceEEEEEcC-C--eEEEEE-CCeEEEEECCCC---ceeeEEeCCCC
Q 019349 70 PSLSPRRLCLFNTTTGTA-------LREL-NFLTSILAVRLNK-K--RLVIVL-REKTYIYDANTL---AILDTIDTVPN 134 (342)
Q Consensus 70 ~~~~d~~i~iwd~~~~~~-------~~~~-~~~~~v~~i~~~~-~--~~~~~~-d~~i~i~d~~~~---~~~~~~~~~~~ 134 (342)
.|++|++||+.++.. ...+ .+...|.+++|++ + .++.++ |+.|++||++++ +.+..+..+.
T Consensus 202 ---~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~- 277 (430)
T 2xyi_A 202 ---DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT- 277 (430)
T ss_dssp ---TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS-
T ss_pred ---CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC-
Confidence 489999999987432 2233 3455899999987 2 333444 889999999876 4666665443
Q ss_pred CceEEEEeeCCCcc-EEEEeCCCCccEEEEEEccC-CceeEEEecccCCeeEEEECCCCC-EEEEEeCCCcEEEEEEcCC
Q 019349 135 LKGLCAFSPSLNAC-FLAVPASTTKGSVLVYNVME-LHSHCEIDAHQAPLAAIVLSSNGM-YIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 135 ~~~~~~~~~~~~~~-~l~~~~~~~~g~i~iwd~~~-~~~~~~~~~h~~~v~~i~~s~dg~-~lat~s~dg~~irlwd~~~ 211 (342)
..+.+++++|++. ++++++ .||.|++||+++ .+++..+..|..+|++++|+|+++ +|++++.||+ |++||+..
T Consensus 278 -~~v~~i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~~ 353 (430)
T 2xyi_A 278 -AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSK 353 (430)
T ss_dssp -SCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGGG
T ss_pred -CCeEEEEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCCC
Confidence 4577778888776 566666 689999999998 567888999999999999999985 7999999998 58999987
Q ss_pred --------------CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 212 --------------ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 212 --------------~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.+.+..+. .+...|.+++|+|++.. +|++++.||.|+||++...
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~--~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPW--IICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECC--CCSSCEEEEEECSSSTT--EEEEEETTSEEEEEEECHH
T ss_pred CccccCccccccCCcceEEEcC--CCCCCceEEEECCCCCC--EEEEEECCCCEEEeEcccc
Confidence 24445443 23456999999999863 7999999999999998754
No 114
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=1.9e-27 Score=220.49 Aligned_cols=243 Identities=16% Similarity=0.110 Sum_probs=175.5
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEeCCCCcEEEEEee--C--CEEEEEEcCCCCeEEEEcCCCCCCCCCCeE
Q 019349 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYERAV--G--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 4 ~~~~~~V~~l~fs~-d~~~la~g~~~g-~~v~d~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i 77 (342)
..|..+|++|+|+| ++++|++|+.|+ +++||+.+......... . .+..+.+.++++.++..+ .|++|
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-------~dg~i 233 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-------NVGNV 233 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-------SSSBE
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-------CCCcE
Confidence 45788999999998 688999998887 69999987654332221 2 234456667777776655 48999
Q ss_pred EEEECCCCcEEEEEe-cCCceEEEEEcCCe--EE-EEE-CCeEEEEECCCCceeeEEe-CCCCCceEEEEeeCCCccEEE
Q 019349 78 CLFNTTTGTALRELN-FLTSILAVRLNKKR--LV-IVL-REKTYIYDANTLAILDTID-TVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 78 ~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~-~~~-d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 151 (342)
++||++. +.+..+. +...|.+++|+++. ++ .++ |+.|++||+++.+....+. ...+...+.+++++|++.+|+
T Consensus 234 ~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 234 ILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp EEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred eeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 9999865 4444444 45689999998753 33 344 8899999998876544332 223445688889999999999
Q ss_pred EeCCCCccEEEEEEccCCceeEEEecccC------CeeEEEECCCCCEEEEEeC-----------CCcEEEEEEcCCCee
Q 019349 152 VPASTTKGSVLVYNVMELHSHCEIDAHQA------PLAAIVLSSNGMYIATASE-----------QGTIIRVFLVSEATK 214 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~~~~~~~~~~h~~------~v~~i~~s~dg~~lat~s~-----------dg~~irlwd~~~~~~ 214 (342)
+++ .||.|++||+.+++....+..|.. .+....|+|++.++++++. ++..|++||..+++.
T Consensus 313 s~~--~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 313 TTD--QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp EEE--SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred EEc--CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 988 689999999999988777766543 2334567777777776642 333479999999999
Q ss_pred EEEeccCcCceeEEEE-EEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 215 SYSFRRGTYPSTIFSL-SFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 215 ~~~~~~~~~~~~v~~l-~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
+..+..+ +...|.++ +|+|++. +|++|+ |++|+||+++.++.
T Consensus 391 ~~~l~~~-~~~~v~s~~~fspdg~---~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 391 MCQLYDP-ESSGISSLNEFNPMGD---TLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EEEECCS-SCCCCCCEEEECTTSS---CEEEEC-SSEEEECCCC----
T ss_pred EEEEeCC-CCCcEEEEEEECCCCC---EEEEEc-CCcEEEEECCcCee
Confidence 8887544 34457776 6999999 888776 78999999987654
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.3e-26 Score=211.90 Aligned_cols=255 Identities=13% Similarity=0.178 Sum_probs=175.2
Q ss_pred eeCCEEEEEEcCC-CCeEEEEcCCCCCCCCCCeEEEEECCC----------CcEEEEEe-cCCceEEEEEcCCe--EEE-
Q 019349 45 AVGAFSIVEMLYS-SSLLAIVGAGEQPSLSPRRLCLFNTTT----------GTALRELN-FLTSILAVRLNKKR--LVI- 109 (342)
Q Consensus 45 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~d~~i~iwd~~~----------~~~~~~~~-~~~~v~~i~~~~~~--~~~- 109 (342)
+.+.+..+.+.+. .+++++.+ .++.|++||+.+ .+.+..+. +...|.+++|+++. .++
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~-------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKT-------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEEC-------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred CCCcEEEEEECCCCCcEEEEEC-------CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 4456666777665 34444443 489999999976 45555554 45589999998863 333
Q ss_pred EE-CCeEEEEECCCCce-------eeEEeCCCCCceEEEEeeCC-CccEEEEeCCCCccEEEEEEccCC---ceeEEEec
Q 019349 110 VL-REKTYIYDANTLAI-------LDTIDTVPNLKGLCAFSPSL-NACFLAVPASTTKGSVLVYNVMEL---HSHCEIDA 177 (342)
Q Consensus 110 ~~-d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~g~i~iwd~~~~---~~~~~~~~ 177 (342)
+. |+.|++|++..+.. ...+.. +...+.+++++| ++.++++++ .+|.|++||++++ +.+..+.+
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~--~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTG--HTAVVEDVAWHLLHESLFGSVA--DDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECC--CSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCSCSSSCSEEEEC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecC--CCCCEeeeEEeCCCCCEEEEEe--CCCeEEEEECCCCCCCcceeEeec
Confidence 33 88999999987422 233333 334577777777 566777777 5899999999987 57778889
Q ss_pred ccCCeeEEEECCCCC-EEEEEeCCCcEEEEEEcCC-CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEe
Q 019349 178 HQAPLAAIVLSSNGM-YIATASEQGTIIRVFLVSE-ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 255 (342)
Q Consensus 178 h~~~v~~i~~s~dg~-~lat~s~dg~~irlwd~~~-~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd 255 (342)
|..+|++|+|+|++. +|++|+.||+ |++||+++ ++.+..+..+ ...|.+++|+|+++ .+|++++.||+|+|||
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~h--~~~v~~i~~sp~~~--~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHSFESH--KDEIFQVQWSPHNE--TILASSGTDRRLHVWD 350 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEECC--SSCEEEEEECSSCT--TEEEEEETTSCCEEEE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeecC--CCCEEEEEECCCCC--CEEEEEeCCCcEEEEe
Confidence 999999999999987 7999999997 58999998 5566777543 55799999999985 2799999999999999
Q ss_pred cCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCcccc-EEEEEEeCCcEEEEEEecC
Q 019349 256 PGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRA-SVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~v~~~~~~~~ 322 (342)
+............ ....+. .+.....|...+..+.+.+.++ .|++++.||.|++|+++..
T Consensus 351 ~~~~~~~~~~~~~----~~~~~~---~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 351 LSKIGEEQSTEDA----EDGPPE---LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GGGTTCCCCHHHH----HHCCTT---EEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCccccCcccc----ccCCcc---eEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9874322110000 000000 0111111111222333344446 7999999999999998643
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2.9e-25 Score=204.94 Aligned_cols=273 Identities=11% Similarity=0.040 Sum_probs=199.7
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEE-------eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 8 YPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER-------AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
..+.+++|+|++.++++++.++ +++||+.+++..... +.+.+..+.+..++..++..+ .++.|++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-------~d~~v~~ 195 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM-------QANAVHV 195 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG-------GGTEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC-------CCCEEEE
Confidence 4466899999777777777665 899999998776432 123455566655555554444 3899999
Q ss_pred EECCCCcEEEEEec-CCceEEEEEcCCe--EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeC
Q 019349 80 FNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 80 wd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 154 (342)
||+.+++.+..+.. ...+.+++++++. ++++. ++.|++||+.+++.+..+..+ ..+.+++++|++..+++++
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI---GLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC---SEEEEEEECTTSSEEEEEE
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC---CCceEEEEcCCCCEEEEEE
Confidence 99999999888864 4589999998764 44455 689999999999887776542 3477788888888887765
Q ss_pred CC------CccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEE-EEEeCCCcEEEEEEcCCCeeEEEeccCcCceeE
Q 019349 155 ST------TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYI-ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTI 227 (342)
Q Consensus 155 ~~------~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~l-at~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v 227 (342)
.. .+|.|++||+.+++.+..+ .|...+.+++|+|+|+.| ++++.|++ +++||+.+++.+..+.. ...+
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~~---~~~~ 347 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIPV---FDKP 347 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEEC---SSSE
T ss_pred CCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEecC---CCCC
Confidence 21 2789999999998876655 466689999999999755 66678887 58999999988877742 3458
Q ss_pred EEEEEecCCCcccEEEEEeC---------------CCcEEEEecCCCCCCCCCCCcccccccccccccccccccccccee
Q 019349 228 FSLSFGQSMQFQDILVATSS---------------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVL 292 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~s~---------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
.+++|+|+++ +|++++. ||.|++||+++.+.... +.. ........|
T Consensus 348 ~~~~~s~dg~---~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~-------~~~-~~~~~~~~~-------- 408 (433)
T 3bws_A 348 NTIALSPDGK---YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF-------WEA-GNQPTGLDV-------- 408 (433)
T ss_dssp EEEEECTTSS---EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE-------EEC-SSSEEEEEE--------
T ss_pred CeEEEcCCCC---EEEEEecCCCccccccccccccceEEEEEECCCCcEEEE-------ecC-CCCCceEEE--------
Confidence 8999999998 8888876 57999999987653221 000 000111233
Q ss_pred eeccCCCccccEEEEEEe-CCcEEEEEEe
Q 019349 293 RNAFPAGVKRASVSVITY-NGYFVEYIFS 320 (342)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~-dg~v~~~~~~ 320 (342)
.++++.|++++. ||.+++|+++
T Consensus 409 ------s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 409 ------SPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ------CTTSCEEEEEETTTTEEEEEEET
T ss_pred ------cCCCCEEEEEECCCCeEEEEEec
Confidence 344478888886 9999999875
No 117
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=8.6e-26 Score=204.71 Aligned_cols=197 Identities=14% Similarity=0.200 Sum_probs=152.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEc--CCc-EEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALST--KDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~--~~g-~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
.++..+++++|||||++|++++ .++ ++|||+.+++.++... .+.+..+.+.+++++++.++ ++.+++|
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s--------~~~~~~~ 202 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT--------GSSLEVI 202 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC--------SSCEEEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc--------ceeEEEE
Confidence 3455689999999999987654 455 6999999998776653 35677788888888887765 4578888
Q ss_pred ECCCCcEEEEEe---cCCceEEEEEcCCeEEEE--E-CC----eEEEEECCCCce--eeEEeCCCCCceEEEEeeCCCcc
Q 019349 81 NTTTGTALRELN---FLTSILAVRLNKKRLVIV--L-RE----KTYIYDANTLAI--LDTIDTVPNLKGLCAFSPSLNAC 148 (342)
Q Consensus 81 d~~~~~~~~~~~---~~~~v~~i~~~~~~~~~~--~-d~----~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 148 (342)
+..+++.+.... +...|.+++|+++...++ + ++ .+++|++..... ........+...+.+++++|++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~ 282 (365)
T 4h5i_A 203 STVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE 282 (365)
T ss_dssp ETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC
T ss_pred EeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC
Confidence 888888776543 234789999988754443 3 44 688899876543 22222223345688889999999
Q ss_pred EEEEeCCCCccEEEEEEccCCceeEEE-ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 019349 149 FLAVPASTTKGSVLVYNVMELHSHCEI-DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~~~~~~~~-~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~ 212 (342)
+||+++ .|++|+|||+++++++.++ .+|..+|++|+|||||++|||||.|++ |||||+...
T Consensus 283 ~lasgs--~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t-vrvw~ip~~ 344 (365)
T 4h5i_A 283 LAVLAS--NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT-IHIIKLPLN 344 (365)
T ss_dssp EEEEEE--TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE-EEEEECCTT
T ss_pred ceEEEc--CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe-EEEEEcCCC
Confidence 999988 6899999999999999886 689999999999999999999999998 599999643
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.1e-28 Score=224.51 Aligned_cols=259 Identities=10% Similarity=0.035 Sum_probs=181.5
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcE-EEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKDGF-KIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~g~-~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~ 85 (342)
...|.+++|+|||+++|+++.|+. + |...++.+ ..|...+..+.+.+++ .++++.+|+.+..
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l-~gh~~~v~~V~FsPdg--------------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI-NCNSKNLFHVKEFPLE--------------FENKLDFELAQQN 77 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC-SSBGGGTEEEEEECCC--------------CCCTTTTSCCCSS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccccee-cCCCccEEEEEECCCC--------------CcceEEEEeCCCc
Confidence 467899999999999999999885 6 76555433 3444556666665544 1556666654322
Q ss_pred cEEEEEecCCceEEEEEcCCeEEE--EE-CCeEEEEECCCCceeeEEeCCCC---CceEEEEeeCCCccEEEEeCCCCcc
Q 019349 86 TALRELNFLTSILAVRLNKKRLVI--VL-REKTYIYDANTLAILDTIDTVPN---LKGLCAFSPSLNACFLAVPASTTKG 159 (342)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~~~--~~-d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~g 159 (342)
+ +..+.+...|.+++|+|++..+ ++ |+.|++||... ++..+. +.. ...+.+++++|++.+||+++ .||
T Consensus 78 ~-~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs--~DG 151 (588)
T 2j04_A 78 G-LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN--EDG 151 (588)
T ss_dssp C-SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE--TTS
T ss_pred e-EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc--CCC
Confidence 2 3333345689999999986544 34 89999999644 555544 332 23577999999999999998 699
Q ss_pred EEEEEEccCCc-------eeEEE----ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCee---EEEeccCcCce
Q 019349 160 SVLVYNVMELH-------SHCEI----DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK---SYSFRRGTYPS 225 (342)
Q Consensus 160 ~i~iwd~~~~~-------~~~~~----~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~---~~~~~~~~~~~ 225 (342)
+|+|||+.+++ .+.++ .+|.+.|.+++|+||| ||+++.|++ +|+||+.+++. ..++..+ +..
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t-VrlWd~~~~~~~~~~~tL~~~-h~~ 227 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS-VFSMTVSASSHQPVSRMIQNA-SRR 227 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC-EEEECCCSSSSCCCEEEEECC-CSS
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe-EEEEECCCCccccceeeeccc-ccC
Confidence 99999998875 25676 5688899999999999 888899988 59999988773 2345333 345
Q ss_pred eEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCC--Ccccc
Q 019349 226 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPA--GVKRA 303 (342)
Q Consensus 226 ~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 303 (342)
.|.+++|+ ++ +||+++ +++|++||+........ .-++... + ..+++ .+++.
T Consensus 228 ~V~svaFs--g~---~LASa~-~~tIkLWd~~~~~~~~~-------~~gh~~~----V----------~~va~~~s~d~~ 280 (588)
T 2j04_A 228 KITDLKIV--DY---KVVLTC-PGYVHKIDLKNYSISSL-------KTGSLEN----F----------HIIPLNHEKEST 280 (588)
T ss_dssp CCCCEEEE--TT---EEEEEC-SSEEEEEETTTTEEEEE-------ECSCCSC----C----------CEEEETTCSSCE
T ss_pred cEEEEEEE--CC---EEEEEe-CCeEEEEECCCCeEEEE-------EcCCCce----E----------EEEEeeeCCCCC
Confidence 69999999 46 899887 69999999886643110 0011111 1 11222 34446
Q ss_pred EEEEEEeCCcEEEEEEe
Q 019349 304 SVSVITYNGYFVEYIFS 320 (342)
Q Consensus 304 ~l~~~~~dg~v~~~~~~ 320 (342)
.|++++.||. ++|.++
T Consensus 281 ~La~a~edG~-klw~~d 296 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEECSSCEE-EEEESS
T ss_pred EEEEEcCCCC-EEEeec
Confidence 7888888999 888764
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.7e-25 Score=208.13 Aligned_cols=256 Identities=11% Similarity=0.060 Sum_probs=184.6
Q ss_pred CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc---EEEEEecC-----------------------------
Q 019349 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT---ALRELNFL----------------------------- 94 (342)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~---~~~~~~~~----------------------------- 94 (342)
+++..+.+.+++++++... ++.|++||+.+|+ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~~--------~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII--------KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKL 76 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE--------TTEEEEEEEETTTEEEEEEEEECCC----------------------------
T ss_pred ccEEEEEecCCCCEEEEEe--------CCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccccc
Confidence 4566677878887554443 5799999999998 55554421
Q ss_pred --------------------------CceEEEEEcCCeEE--EEE--CCeEEEEECC--CCceeeEEeCCCCCceEEEEe
Q 019349 95 --------------------------TSILAVRLNKKRLV--IVL--REKTYIYDAN--TLAILDTIDTVPNLKGLCAFS 142 (342)
Q Consensus 95 --------------------------~~v~~i~~~~~~~~--~~~--d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~ 142 (342)
..|.+++|+++... +++ |+.|++||+. +++.+..+..+..+..+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 77 KSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp -----------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEE
T ss_pred ccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEE
Confidence 15899999987533 333 7899999999 888888876544556788899
Q ss_pred eCCCccEEEEeCCCCccEEEEEEccCCceeE----EEecccCCeeEEEECCC---CCEEEEEeCCCcEEEEEEcCCCeeE
Q 019349 143 PSLNACFLAVPASTTKGSVLVYNVMELHSHC----EIDAHQAPLAAIVLSSN---GMYIATASEQGTIIRVFLVSEATKS 215 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~----~~~~h~~~v~~i~~s~d---g~~lat~s~dg~~irlwd~~~~~~~ 215 (342)
++|++.+|++++ .+|.|++|++.+++... .+.+|..+|++++|+|+ +++|++|+.|++ |++||+.+++.+
T Consensus 157 ~sp~~~~l~~~~--~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~-i~vwd~~~~~~~ 233 (450)
T 2vdu_B 157 IAEDDTTVIIAD--KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH-IKISHYPQCFIV 233 (450)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC-EEEEEESCTTCE
T ss_pred EcCCCCEEEEEe--CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc-EEEEECCCCcee
Confidence 999999999887 58999999998876544 77899999999999999 999999999998 589999999888
Q ss_pred EEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccc-c-ccccccc---ccc
Q 019349 216 YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPES-V-NEVLDPA---DHH 290 (342)
Q Consensus 216 ~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~---~~~ 290 (342)
..+..+ +...|.+++|+ +++ +|++++.|++|++||+++++.......... ...+.... . ...+... ...
T Consensus 234 ~~~~~~-h~~~v~~~~~s-d~~---~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 234 DKWLFG-HKHFVSSICCG-KDY---LLLSAGGDDKIFAWDWKTGKNLSTFDYNSL-IKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp EEECCC-CSSCEEEEEEC-STT---EEEEEESSSEEEEEETTTCCEEEEEECHHH-HGGGCCTTSBC----------CBC
T ss_pred eeeecC-CCCceEEEEEC-CCC---EEEEEeCCCeEEEEECCCCcEeeeecchhh-hhhhhhhcccccccccccccccce
Confidence 775433 35679999999 998 999999999999999988764332110000 00000000 0 0000000 011
Q ss_pred eeeeccCCCccccEEEEEE-eCCcEEEEEE
Q 019349 291 VLRNAFPAGVKRASVSVIT-YNGYFVEYIF 319 (342)
Q Consensus 291 ~~~~~~~~~~~~~~l~~~~-~dg~v~~~~~ 319 (342)
..+..+.+.++++.|++++ .||.|++|++
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 1223344456668899999 8999999999
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.7e-25 Score=201.95 Aligned_cols=234 Identities=12% Similarity=0.076 Sum_probs=173.2
Q ss_pred CeEEEEEcCCCCEEE-EEcCC-cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC-
Q 019349 9 PVFFVSFNQDNSGFA-LSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG- 85 (342)
Q Consensus 9 ~V~~l~fs~d~~~la-~g~~~-g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~- 85 (342)
.+..++|.++++.++ +|+.+ .+++||+.+++.+....... .+..+.++.+.++++. +++|++||+.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~--------~~~i~i~d~~~~~ 130 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDA-PVKDLFLSREFIVVSY--------GDVISVFKFGNPW 130 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSS-CEEEEEECSSEEEEEE--------TTEEEEEESSTTC
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCC-ceEEEEEcCCEEEEEE--------cCEEEEEECCCCc
Confidence 477888999888874 45555 57999999998776654322 3334445566666553 579999999988
Q ss_pred cEEEEEecCCceEEEEEcCCeEEEE-E--CCeEEEEECCCCc----------------eeeEEeCCCCCceEEEEeeCCC
Q 019349 86 TALRELNFLTSILAVRLNKKRLVIV-L--REKTYIYDANTLA----------------ILDTIDTVPNLKGLCAFSPSLN 146 (342)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~~~~-~--d~~i~i~d~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 146 (342)
+.+..+.. +...+++++..++++ + ++.|++||+.+++ .+..+..|. ..+.+++++|+
T Consensus 131 ~~~~~~~~--~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--~~v~~~~~s~~ 206 (355)
T 3vu4_A 131 KRITDDIR--FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--NPIKMVRLNRK 206 (355)
T ss_dssp CBSSCCEE--EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCS--SCEEEEEECTT
T ss_pred eeeEEecc--CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC--CceEEEEECCC
Confidence 66555444 334455666777776 2 7899999998765 145555443 46778888899
Q ss_pred ccEEEEeCCCCccE-EEEEEccCCceeEEEe-c-ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCee--EEEecc-
Q 019349 147 ACFLAVPASTTKGS-VLVYNVMELHSHCEID-A-HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK--SYSFRR- 220 (342)
Q Consensus 147 ~~~l~~~~~~~~g~-i~iwd~~~~~~~~~~~-~-h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~--~~~~~~- 220 (342)
+.+||+++ .||+ |++||+++++++..+. + |..+|++++|+|||++|++++.|++ |++||++++.. ...+..
T Consensus 207 g~~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~-v~iw~~~~~~~~~~~~~~~~ 283 (355)
T 3vu4_A 207 SDMVATCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT-LHVFEIFNDQDNKRHALKGW 283 (355)
T ss_dssp SSEEEEEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE-EEEEESSCCSCCCSEETTTT
T ss_pred CCEEEEEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE-EEEEEccCCCCcccccccce
Confidence 99999998 6898 9999999999999998 5 9999999999999999999999997 58999976531 111100
Q ss_pred ------------------CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 221 ------------------GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 221 ------------------~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.........++|++|++ +|++++.||.+++|++....+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~---~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 284 INMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS---LVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE---EEEEETTTTEEEEEEEEEETT
T ss_pred eeccccccccceeEEEeccCCCCCceEEEEeCCCC---EEEEEeCCCeEEEEEEEcCCC
Confidence 00111236689999999 999999999999999876554
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-25 Score=222.05 Aligned_cols=247 Identities=10% Similarity=0.056 Sum_probs=180.1
Q ss_pred EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC--CCcEEEEEe-cCCceEEEEEcCC----eEEEEE-CC
Q 019349 42 YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALRELN-FLTSILAVRLNKK----RLVIVL-RE 113 (342)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~--~~~~~~~~~-~~~~v~~i~~~~~----~~~~~~-d~ 113 (342)
+..|.+.+..+.+.++++.+++++. |++|++||+. +++.+..+. +...|.+++|+++ .++.++ |+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~-------dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSS-------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEET-------TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred cccCcceeEEEEECCCCCeEEEEEC-------CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 3456677887888777887777664 8999999997 445555554 4568999999754 445555 89
Q ss_pred eEEEEECCCCc--eeeEEeCCCCCceEEEEeeCCC--ccEEEEeCCCCccEEEEEEccCCc--eeEEEecccCCeeEEEE
Q 019349 114 KTYIYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELH--SHCEIDAHQAPLAAIVL 187 (342)
Q Consensus 114 ~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~h~~~v~~i~~ 187 (342)
.|++||+.+++ .+..+.. +...+.+++++|+ +..+++++ .||.|++||+.++. ....+.+|..+|.+++|
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp CEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred eEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 99999999886 4444443 3446777777777 78898888 68999999998773 44567789999999999
Q ss_pred CC-------------CCCEEEEEeCCCcEEEEEEcCCC----eeEEEeccCcCceeEEEEEEecC---CCcccEEEEEeC
Q 019349 188 SS-------------NGMYIATASEQGTIIRVFLVSEA----TKSYSFRRGTYPSTIFSLSFGQS---MQFQDILVATSS 247 (342)
Q Consensus 188 s~-------------dg~~lat~s~dg~~irlwd~~~~----~~~~~~~~~~~~~~v~~l~fs~d---~~~~~~l~~~s~ 247 (342)
+| ++.+|++|+.||+ |++||++++ ..+..+.. +...|.+++|+|+ +. +|++++.
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~---~l~s~s~ 227 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRS---YLASVSQ 227 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSE---EEEEEES
T ss_pred cCcccccccccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCC---EEEEEec
Confidence 99 5999999999998 589999887 34444432 3567999999999 77 9999999
Q ss_pred CCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 248 SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 248 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
||+|++||++.......... .....+... +..+.+.+++..|++++.||.|++|+++.
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~--~~~~~~~~~--------------v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTL--LKEEKFPDV--------------LWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCB--SSSSCCSSC--------------CCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCEEEEecCCCCCCcceeEE--eccCCCCCc--------------eEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999987643211000 000001111 11223344457899999999999999874
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=3.5e-24 Score=197.71 Aligned_cols=236 Identities=15% Similarity=0.096 Sum_probs=188.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
.+...|.+++|+|++.++++++.++ +++||+.+++.+.... ...+..+.+.++.+.+++++. .++.|++||
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~i~~~d 240 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW------ISEDISVID 240 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET------TTTEEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec------CCCcEEEEE
Confidence 4567899999999999999998766 6999999987765543 356777788888887766664 488999999
Q ss_pred CCCCcEEEEEecCCceEEEEEcCCe--EEEEE---------CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 82 TTTGTALRELNFLTSILAVRLNKKR--LVIVL---------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 82 ~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
+++++.+..+.....+.+++++++. ++++. |+.|++||+.+++.+..+... .....++++|++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 241 RKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP---GNKRHIVSGNTENKI 317 (433)
T ss_dssp TTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE---ECEEEEEECSSTTEE
T ss_pred CCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC---CCcceEEECCCCCEE
Confidence 9999998888877789999998874 44444 459999999998877666322 235566777888666
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeC---------------CCcEEEEEEcCCCeeE
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASE---------------QGTIIRVFLVSEATKS 215 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~---------------dg~~irlwd~~~~~~~ 215 (342)
++++. .++.|++||+.+++.+..+. |...+.+++|+|+|++|++++. ||. |++||+.+++.+
T Consensus 318 ~~~~~-~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~~ 394 (433)
T 3bws_A 318 YVSDM-CCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTVK 394 (433)
T ss_dssp EEEET-TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTEEE
T ss_pred EEEec-CCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCcEE
Confidence 55543 68999999999998887776 6778999999999999999887 456 589999999988
Q ss_pred EEeccCcCceeEEEEEEecCCCcccEEEEEeC-CCcEEEEecCC
Q 019349 216 YSFRRGTYPSTIFSLSFGQSMQFQDILVATSS-SGSLHVFSPGF 258 (342)
Q Consensus 216 ~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~-dg~i~vwd~~~ 258 (342)
..+.. ...+.+++|+||++ +|++++. |++|++|+++.
T Consensus 395 ~~~~~---~~~~~~~~~s~dg~---~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 395 EFWEA---GNQPTGLDVSPDNR---YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEC---SSSEEEEEECTTSC---EEEEEETTTTEEEEEEETT
T ss_pred EEecC---CCCCceEEEcCCCC---EEEEEECCCCeEEEEEecC
Confidence 88754 23589999999998 8887765 99999999863
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=2.3e-24 Score=197.21 Aligned_cols=215 Identities=11% Similarity=-0.009 Sum_probs=136.3
Q ss_pred CCCeEEEEECCCCcEEEEEe------cCCceEEEEEcC--------CeEEE--EE-CCeEEEEECCCCceeeEEeCCCCC
Q 019349 73 SPRRLCLFNTTTGTALRELN------FLTSILAVRLNK--------KRLVI--VL-REKTYIYDANTLAILDTIDTVPNL 135 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~~~------~~~~v~~i~~~~--------~~~~~--~~-d~~i~i~d~~~~~~~~~~~~~~~~ 135 (342)
.|++|+|||..+++...... |...|.+++|+| +..++ ++ |++|+|||+.++..+..+..+..
T Consensus 109 ~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~- 187 (393)
T 4gq1_A 109 QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSS- 187 (393)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSS-
T ss_pred CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCC-
Confidence 59999999999887654321 356899999976 33333 33 88999999988877666655544
Q ss_pred ceEEEEeeCCCcc-EEEEeCCCCccEEEEEEccCCceeEE-------------------------EecccCCeeEEEEC-
Q 019349 136 KGLCAFSPSLNAC-FLAVPASTTKGSVLVYNVMELHSHCE-------------------------IDAHQAPLAAIVLS- 188 (342)
Q Consensus 136 ~~~~~~~~~~~~~-~l~~~~~~~~g~i~iwd~~~~~~~~~-------------------------~~~h~~~v~~i~~s- 188 (342)
.+.+++++|++. +|++++ .||+|++||+++++.... ..+|...|.++.|+
T Consensus 188 -~v~~v~~~p~~~~~l~~~~--~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 188 -PGISVQFRPSNPNQLIVGE--RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp -CEEEEEEETTEEEEEEEEE--TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred -CcEEEEECCCCCceEEecC--CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence 456777777764 677766 689999999987754321 23678889999987
Q ss_pred CCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEE------------------EEEec--CCCcccEEEEEeCC
Q 019349 189 SNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFS------------------LSFGQ--SMQFQDILVATSSS 248 (342)
Q Consensus 189 ~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~------------------l~fs~--d~~~~~~l~~~s~d 248 (342)
|||+.|++++.|++ +++||+.+++....+..+ ...+.. ..|+| ++. ++++|+.|
T Consensus 265 ~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~sgs~D 338 (393)
T 4gq1_A 265 SDGSGILAMCKSGA-WLRWNLFANNDYNEISDS--TMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY---FATAHSQH 338 (393)
T ss_dssp TTTCEEEEECTTSE-EEEEEC---------------------CCSCSEEEECSSCCSSCCEECSSCTTE---EEEEETTT
T ss_pred CCCCEEEEEeCCCC-EEEEECccCCCCceEeee--cCccccEEEccccccccccCcceeEEEccCCCCE---EEEEECCC
Confidence 79999999999998 589999888765554322 111222 23333 334 67788899
Q ss_pred CcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEE
Q 019349 249 GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIF 319 (342)
Q Consensus 249 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~ 319 (342)
|+|+|||+..+..... ...+........|+|+ +++|++++.|| +.+|.+
T Consensus 339 g~V~lwd~~~~~~~~~-------~~~~~~~V~svafspd--------------G~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSI-------PIQLGMPIVDFCWHQD--------------GSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TEEEEEETTCTTCCEE-------EEECSSCEEEEEECTT--------------SSEEEEEESSE-EEEEEE
T ss_pred CEEEEEECCCCcEEEE-------ecCCCCcEEEEEEcCC--------------CCEEEEEeCCC-eEEEEE
Confidence 9999999987654321 0111111122345554 47888887665 555655
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=5.5e-25 Score=201.35 Aligned_cols=233 Identities=12% Similarity=0.061 Sum_probs=145.2
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEE-------EeeCCEEEEEEcC--------CCCeEEEEcCCCCCCC
Q 019349 9 PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE-------RAVGAFSIVEMLY--------SSSLLAIVGAGEQPSL 72 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~-------~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~ 72 (342)
.+....+++++.+||+|+.|+ +++||+.+++.... .|.+.+..+++.+ +++.++.++
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s------- 163 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG------- 163 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE-------
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE-------
Confidence 334445556777899998776 79999988865432 2445677777754 334555555
Q ss_pred CCCeEEEEECCCCcEEE-EEecCCceEEEEEcCCe--EEE-EE-CCeEEEEECCCCceeeEEeCCC--------------
Q 019349 73 SPRRLCLFNTTTGTALR-ELNFLTSILAVRLNKKR--LVI-VL-REKTYIYDANTLAILDTIDTVP-------------- 133 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~-~~~~~~~v~~i~~~~~~--~~~-~~-d~~i~i~d~~~~~~~~~~~~~~-------------- 133 (342)
.|++|+|||+.++.++. ...+...|.+++|+|+. +++ ++ |++|++||+.+++.........
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 49999999998776654 45677899999999864 233 33 8899999998876543332110
Q ss_pred ---------CCceEEEEee-CCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECC--------------
Q 019349 134 ---------NLKGLCAFSP-SLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSS-------------- 189 (342)
Q Consensus 134 ---------~~~~~~~~~~-~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~-------------- 189 (342)
+...+.++.+ .+++..+++++ .|+++++||+..++....+..|...+..+.+.|
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s--~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMC--KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEEC--TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCC
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEe--CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeE
Confidence 1112223333 36788888887 689999999988876666666665555544433
Q ss_pred ------CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 190 ------NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 190 ------dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
++.++++|+.||+ |++||+.+++.+..+..+ ...|.+|+|||||+ +||+++++| +.+|.+.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~~~~~--~~~V~svafspdG~---~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGL-IQLINTYEKDSNSIPIQL--GMPIVDFCWHQDGS---HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EECSSCTTEEEEEETTTTE-EEEEETTCTTCCEEEEEC--SSCEEEEEECTTSS---EEEEEESSE-EEEEEEG
T ss_pred EEccCCCCEEEEEECCCCE-EEEEECCCCcEEEEecCC--CCcEEEEEEcCCCC---EEEEEeCCC-eEEEEEe
Confidence 3446788889997 589999999887766543 45699999999999 999998765 6666653
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=2.9e-24 Score=192.97 Aligned_cols=242 Identities=7% Similarity=0.075 Sum_probs=169.4
Q ss_pred EeeCCEEEEEEcCCC---CeEEEEcCCCCCCCCCCeEEEEECCC-CcEE-EEEe-cCCceEEEEEcCCe--EEEEE-CCe
Q 019349 44 RAVGAFSIVEMLYSS---SLLAIVGAGEQPSLSPRRLCLFNTTT-GTAL-RELN-FLTSILAVRLNKKR--LVIVL-REK 114 (342)
Q Consensus 44 ~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~d~~i~iwd~~~-~~~~-~~~~-~~~~v~~i~~~~~~--~~~~~-d~~ 114 (342)
.|.+.+..+.+.++. +.++..+ .|+.|++||+.+ ++.+ ..+. +...|.+++|+++. ++.++ |+.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGS-------WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEE-------TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCceEEEEEcCCCCCceEEEEEC-------CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 345678888887774 5555554 389999999987 5554 4443 56699999998874 44444 889
Q ss_pred EEEEECCCCceeeEEeCCCCCceEEEEee--CCCccEEEEeCCCCccEEEEEEccCCceeEEEeccc-------------
Q 019349 115 TYIYDANTLAILDTIDTVPNLKGLCAFSP--SLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQ------------- 179 (342)
Q Consensus 115 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~------------- 179 (342)
|++||+.+++.+.... +.. .+.++++ ++++.++++++ .||.|++||+++++++..+..|.
T Consensus 110 v~iwd~~~~~~~~~~~-~~~--~v~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIAQ-HDA--PVKTIHWIKAPNYSCVMTGS--WDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV 184 (368)
T ss_dssp EEEEETTTTEEEEEEE-CSS--CEEEEEEEECSSCEEEEEEE--TTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred EEEEEcCCCCceeecc-ccC--ceEEEEEEeCCCCCEEEEcc--CCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence 9999999988776443 333 3555555 88888899888 68999999999888776665443
Q ss_pred ----------------------------CCeeEEEECCCCCE----EEEEeCCCcEEEEEEcCCC---eeEEEeccCcCc
Q 019349 180 ----------------------------APLAAIVLSSNGMY----IATASEQGTIIRVFLVSEA---TKSYSFRRGTYP 224 (342)
Q Consensus 180 ----------------------------~~v~~i~~s~dg~~----lat~s~dg~~irlwd~~~~---~~~~~~~~~~~~ 224 (342)
..+.++++.+++.. +++++.||. |++||+... +.+..+..+...
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCccccceeeeeeecc
Confidence 33445555554443 999999997 589999887 445555432110
Q ss_pred ----------eeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeee
Q 019349 225 ----------STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRN 294 (342)
Q Consensus 225 ----------~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
..|.+++|+|+++ +|++++.||.|++||+++.+...... .+.. .+.
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~--------------~v~ 319 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHG---TLATVGSDGRFSFWDKDARTKLKTSE-------QLDQ--------------PIS 319 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTC---CEEEEETTSCEEEEETTTTEEEEECC-------CCSS--------------CEE
T ss_pred cccccccccccceEEEEEecCCC---EEEEEccCCeEEEEECCCCcEEEEec-------CCCC--------------Cce
Confidence 1599999999999 99999999999999998765432111 1111 112
Q ss_pred ccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 295 AFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 295 ~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
.+.+.+++.+|++++.||..+.|.+...
T Consensus 320 ~~~~s~~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEEECTTSSCEEEEECCCSTTCGGGCCT
T ss_pred EEEECCCCCeEEEEecccccccccccCC
Confidence 2333444589999999998777765433
No 126
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.3e-25 Score=205.25 Aligned_cols=225 Identities=11% Similarity=0.065 Sum_probs=169.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 4 QSSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 4 ~~~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
..|+..|++++|+|+| ..+.+.+|+.+..+..-..+...+..+.+.+++..++.++. |++|++||.+
T Consensus 49 ~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~-------dg~V~iwd~~ 115 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSN-------NGNVSVFKDN 115 (588)
T ss_dssp SSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEET-------TSCEEEEETT
T ss_pred cCCCccEEEEEECCCC------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeC-------CCcEEEEeCC
Confidence 3577889999999999 33334666644322221123467888999999999998875 8999999954
Q ss_pred CCcEEEEEecCC-----ceEEEEEcCCeEEE--EE-CCeEEEEECCCCce-------eeEEeCC--CCCceEEEEeeCCC
Q 019349 84 TGTALRELNFLT-----SILAVRLNKKRLVI--VL-REKTYIYDANTLAI-------LDTIDTV--PNLKGLCAFSPSLN 146 (342)
Q Consensus 84 ~~~~~~~~~~~~-----~v~~i~~~~~~~~~--~~-d~~i~i~d~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~ 146 (342)
+ ++..+.+.. .+.+++|+|++..+ ++ |++|+|||+.+++. +.++..+ .+...+.+++++|+
T Consensus 116 ~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 116 K--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp E--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred c--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence 4 555555222 49999999986444 44 88999999998753 5666422 23456888888899
Q ss_pred ccEEEEeCCCCccEEEEEEccCCce---eEEE-ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc
Q 019349 147 ACFLAVPASTTKGSVLVYNVMELHS---HCEI-DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT 222 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~~~~---~~~~-~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~ 222 (342)
+ +++++ .|++|++||+..++. ..++ .+|...|.+++|+ |+.||+++ +++ |++||+.+++..... .+
T Consensus 194 g--Laass--~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~t-IkLWd~~~~~~~~~~-~g- 263 (588)
T 2j04_A 194 V--LVAAL--SNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGY-VHKIDLKNYSISSLK-TG- 263 (588)
T ss_dssp E--EEEEE--TTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSE-EEEEETTTTEEEEEE-CS-
T ss_pred c--EEEEe--CCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCe-EEEEECCCCeEEEEE-cC-
Confidence 8 55565 489999999988773 3567 4888999999999 68999998 576 689999988763322 23
Q ss_pred CceeEEEEEE--ecCCCcccEEEEEeCCCcEEEEecC
Q 019349 223 YPSTIFSLSF--GQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 223 ~~~~v~~l~f--s~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+.+.+.+++| +||+. .|+++++||+ ++|..+
T Consensus 264 h~~~V~~va~~~s~d~~---~La~a~edG~-klw~~d 296 (588)
T 2j04_A 264 SLENFHIIPLNHEKEST---ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCSCCCEEEETTCSSCE---EEEECSSCEE-EEEESS
T ss_pred CCceEEEEEeeeCCCCC---EEEEEcCCCC-EEEeec
Confidence 4667999999 99999 9999999999 999986
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.7e-21 Score=185.32 Aligned_cols=282 Identities=12% Similarity=0.081 Sum_probs=195.9
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-EEEEeC--CCCcEEEEEeeC-CEEEEEEcC----CCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 9 PVFFVSFNQDNSGFALSTKDG-FKIFDS--STGRLCYERAVG-AFSIVEMLY----SSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g-~~v~d~--~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
.+.+++|+|||++|++++.++ +++||+ .+++.+.....+ ....+.+.+ +++.+++.+. .+++|.+|
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~------~~~~v~v~ 253 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY------WPPQFAIM 253 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE------ESSEEEEE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc------cCCeEEEE
Confidence 388999999999998887665 799999 788776655433 344566776 7777776653 47899999
Q ss_pred ECCCCcEEEEEecC-----------C-ceEEEEEcCC--eEEEEE--CCeEEEEECCCCceee--EEeCCCCCceEEEEe
Q 019349 81 NTTTGTALRELNFL-----------T-SILAVRLNKK--RLVIVL--REKTYIYDANTLAILD--TIDTVPNLKGLCAFS 142 (342)
Q Consensus 81 d~~~~~~~~~~~~~-----------~-~v~~i~~~~~--~~~~~~--d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~ 142 (342)
|..+++++..+... . .+.++.++++ .+++.. +++|.+||+.+.+.+. .+.... ....+.
T Consensus 254 D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~---~~~~~~ 330 (543)
T 1nir_A 254 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP---FLHDGG 330 (543)
T ss_dssp ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCS---SCCCEE
T ss_pred eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCc---CccCce
Confidence 99999999887642 2 6788999874 344444 7899999998876544 444322 233456
Q ss_pred eCCCccEEEEeCCCCccEEEEEEccCCceeEEEec----ccCCeeEEEECCC-CCEEEEEe-CCCcEEEEEEcCC-----
Q 019349 143 PSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDA----HQAPLAAIVLSSN-GMYIATAS-EQGTIIRVFLVSE----- 211 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~----h~~~v~~i~~s~d-g~~lat~s-~dg~~irlwd~~~----- 211 (342)
++|++.++++++. .+++|.+||+.+++.+..+.. |......+ ++|+ |..++|++ .|++ |++||+.+
T Consensus 331 ~spdg~~l~va~~-~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~-V~v~d~~~~~~~~ 407 (543)
T 1nir_A 331 WDSSHRYFMTAAN-NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS-ISLIGTDPKNHPQ 407 (543)
T ss_dssp ECTTSCEEEEEEG-GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTCTT
T ss_pred ECCCCCEEEEEec-CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce-EEEEEeCCCCCch
Confidence 7788887766554 578999999999999888874 55433333 5677 67777776 5676 68999998
Q ss_pred --CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEe-------CCCcEEEEecCCCCCCCCCCCccccccccccccccc
Q 019349 212 --ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-------SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNE 282 (342)
Q Consensus 212 --~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (342)
++.+.++..+ ...+..++||||++ +|++++ .+++|.|||+++.+.... .++- .
T Consensus 408 ~~~~~v~~l~~~--g~~~~~v~~~pdg~---~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~----------~~~v--~- 469 (543)
T 1nir_A 408 YAWKKVAELQGQ--GGGSLFIKTHPKSS---HLYVDTTFNPDARISQSVAVFDLKNLDAKYQ----------VLPI--A- 469 (543)
T ss_dssp TBTSEEEEEECS--CSCCCCEECCTTCC---EEEECCTTCSSHHHHTCEEEEETTCTTSCCE----------EECH--H-
T ss_pred hcCeEEEEEEcC--CCCceEEEcCCCCC---cEEEecCCCCCcccCceEEEEECCCCCCCeE----------Eeec--h-
Confidence 7888888643 23467799999999 899887 277999999998764311 1100 0
Q ss_pred ccc-ccccceeeeccCCCccccEEEEEEe-----CCcEEEEEEe
Q 019349 283 VLD-PADHHVLRNAFPAGVKRASVSVITY-----NGYFVEYIFS 320 (342)
Q Consensus 283 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-----dg~v~~~~~~ 320 (342)
-|. ...+......+.|.++++.|++... |+.|.+|+..
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 470 EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp HHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred hhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 000 0011112234455777788887643 7999998543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=3.5e-21 Score=183.08 Aligned_cols=282 Identities=15% Similarity=0.088 Sum_probs=196.2
Q ss_pred EEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC--CCCcEEE
Q 019349 14 SFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT--TTGTALR 89 (342)
Q Consensus 14 ~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~--~~~~~~~ 89 (342)
+|+|++..+++++.++ +.+||..+++++.... ...+..+.+.++++++++++. +++|.+||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~-------d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR-------DARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECC-------CCeEEEEECcCCCCcEEE
Confidence 4899998888887766 7999999998876655 334556778888888887775 699999999 8999999
Q ss_pred EEecCCceEEEEEcC----Ce--EEEEE--CCeEEEEECCCCceeeEEeCCCC--------C-ceEEEEeeCCCccEEEE
Q 019349 90 ELNFLTSILAVRLNK----KR--LVIVL--REKTYIYDANTLAILDTIDTVPN--------L-KGLCAFSPSLNACFLAV 152 (342)
Q Consensus 90 ~~~~~~~v~~i~~~~----~~--~~~~~--d~~i~i~d~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~l~~ 152 (342)
++.....+..+++++ +. ++++. +++|.+||..++++++.+..... + ..+.++..++++..+++
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 988777899999998 53 44544 78999999999999988875321 1 13556666666555555
Q ss_pred eCCCCccEEEEEEccCCceeE--EEecccCCeeEEEECCCCCEEEEEeC-CCcEEEEEEcCCCeeEEEeccCcCce--eE
Q 019349 153 PASTTKGSVLVYNVMELHSHC--EIDAHQAPLAAIVLSSNGMYIATASE-QGTIIRVFLVSEATKSYSFRRGTYPS--TI 227 (342)
Q Consensus 153 ~~~~~~g~i~iwd~~~~~~~~--~~~~h~~~v~~i~~s~dg~~lat~s~-dg~~irlwd~~~~~~~~~~~~~~~~~--~v 227 (342)
+.. .+|.|.+||..+.+.+. .+. +...+..++|+|||++|++++. +++ |++||+.+++++..+..+..+. ..
T Consensus 297 s~~-~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 297 NVK-ETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp EET-TTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCTTC
T ss_pred EEC-CCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCCCC
Confidence 544 68999999998876543 443 5677889999999998776654 666 6899999999988876432221 22
Q ss_pred EEEEEecC-CCcccEEEEEe-CCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEE
Q 019349 228 FSLSFGQS-MQFQDILVATS-SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASV 305 (342)
Q Consensus 228 ~~l~fs~d-~~~~~~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
..+ ++|+ +. ++++++ .|++|.|||+++...+. .....+..+. .+. .....+.+.|++++|
T Consensus 374 ~~~-~~p~~g~---~~~s~~~~d~~V~v~d~~~~~~~~---~~~~~v~~l~--------~~g---~~~~~v~~~pdg~~l 435 (543)
T 1nir_A 374 ANF-VHPKYGP---VWSTSHLGDGSISLIGTDPKNHPQ---YAWKKVAELQ--------GQG---GGSLFIKTHPKSSHL 435 (543)
T ss_dssp EEE-EETTTEE---EEEEEBSSSSEEEEEECCTTTCTT---TBTSEEEEEE--------CSC---SCCCCEECCTTCCEE
T ss_pred ccc-CCCCCcc---EEEeccCCCceEEEEEeCCCCCch---hcCeEEEEEE--------cCC---CCceEEEcCCCCCcE
Confidence 222 4787 44 667665 68999999998732211 0011111110 000 001233455666788
Q ss_pred EEEE-------eCCcEEEEEEecCC
Q 019349 306 SVIT-------YNGYFVEYIFSINN 323 (342)
Q Consensus 306 ~~~~-------~dg~v~~~~~~~~~ 323 (342)
++.+ .+++|.+|+++..+
T Consensus 436 ~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 436 YVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTT
T ss_pred EEecCCCCCcccCceEEEEECCCCC
Confidence 8877 37789999876544
No 129
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=3.2e-20 Score=166.06 Aligned_cols=237 Identities=9% Similarity=0.036 Sum_probs=178.5
Q ss_pred CCeEEEEEcCCCCEEEEEcCC--------cEEEEeCCCCcEEEEEee-CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 8 YPVFFVSFNQDNSGFALSTKD--------GFKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~--------g~~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
..+..++|+|++++|++++.+ .+.+||..+++.+..... .....+.+.++++.+++... .++.|.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------~~~~v~ 114 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNT------VNSAVT 114 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEET------TTTEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEec------CCCEEE
Confidence 467899999999998877632 479999999987655443 23344567777777766665 378999
Q ss_pred EEECCCCcEEEEEecCC----------ceEEEEEcCC--eEEEEE---CCeEEEEECCCCceeeEEeCCCCCceEEEEee
Q 019349 79 LFNTTTGTALRELNFLT----------SILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (342)
Q Consensus 79 iwd~~~~~~~~~~~~~~----------~v~~i~~~~~--~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (342)
+||..+++.+..+.... .+.++.++++ .++++. ++.|++||..+++.+..+...... ...+++
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~ 192 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM--STGLAL 192 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT--CCCCEE
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc--cceEEE
Confidence 99999999988887643 2688899876 355555 568999999999888887632221 233455
Q ss_pred CCCccEEEEeCCCCccEEEEEEccCCceeEEEec----ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 144 SLNACFLAVPASTTKGSVLVYNVMELHSHCEIDA----HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 144 ~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~----h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
+|++..++++. .++.|.+||+.+++.+..+.. +...+..++|+|+|++|+.++.++..|.+||+.+++.+..+.
T Consensus 193 s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 193 DSEGKRLYTTN--ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp ETTTTEEEEEC--TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 67777888777 479999999999988877764 556688999999999888877663346899999999888775
Q ss_pred cCcCceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCCCCC
Q 019349 220 RGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAIN 261 (342)
Q Consensus 220 ~~~~~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~~ 261 (342)
.+. ...++|+||++ +|++++ .+++|.+||+++.+.
T Consensus 271 ~~~----~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 271 APE----SLAVLFNPARN---EAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp CSS----CCCEEEETTTT---EEEEEETTTTEEEEEETTTTEE
T ss_pred cCC----CceEEECCCCC---EEEEEECCCCeEEEEECCCCeE
Confidence 432 24689999998 666555 689999999876653
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=1.2e-21 Score=180.57 Aligned_cols=278 Identities=13% Similarity=0.037 Sum_probs=182.1
Q ss_pred CCeEEEEEcCCCC-EEEEEc----CCc-----EEEEeC--CCCcEEEE--E--eeCCEEEEEEcC--------------C
Q 019349 8 YPVFFVSFNQDNS-GFALST----KDG-----FKIFDS--STGRLCYE--R--AVGAFSIVEMLY--------------S 57 (342)
Q Consensus 8 ~~V~~l~fs~d~~-~la~g~----~~g-----~~v~d~--~~~~~~~~--~--~~~~~~~~~~~~--------------~ 57 (342)
..+...+|++.|. ++++|+ .+| +++||+ .+++.+.. . +...+..+.... .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4788889999886 455765 344 699999 88876633 2 111111111111 1
Q ss_pred CCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe--EEEEE-C---CeEEEEECCCCceeeEEeC
Q 019349 58 SSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-R---EKTYIYDANTLAILDTIDT 131 (342)
Q Consensus 58 ~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~-d---~~i~i~d~~~~~~~~~~~~ 131 (342)
...+++++..... ...++|++||+..+.......+...+.+++|+|+. ++.+. + ..|++||+.+++... +..
T Consensus 143 ~~~l~~~s~~~~~-~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGG-QFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS 220 (415)
T ss_dssp TCEEEEEEECSSS-SCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EEC
T ss_pred CCEEEEEEecCCC-CccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eec
Confidence 4556666542100 00179999999865544444566789999999886 44444 4 399999999887653 433
Q ss_pred CCCCceEEEEeeCCCccEEEEeCC-CCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCC-Cc-EEEEEE
Q 019349 132 VPNLKGLCAFSPSLNACFLAVPAS-TTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQ-GT-IIRVFL 208 (342)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~d-g~-~irlwd 208 (342)
+. ..+.+++++|++..|++.+. +.+..|.+||+.+++. ..+..|...+.+++|+|||++|++++.+ |. .|.+||
T Consensus 221 ~~--~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 221 FP--RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp CS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CC--CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 32 35677888899988885432 2245699999998765 5677888999999999999999998864 42 246789
Q ss_pred cCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC---CcEEEEecCCCCCCCCCCCcccccccccccccccccc
Q 019349 209 VSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS---GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLD 285 (342)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
+.+++. ..+.. +...+.+++|+||++ +|++++.+ ..|++||+++.+... +... .......|+
T Consensus 298 ~~~~~~-~~l~~--~~~~~~~~~~spdG~---~l~~~~~~~g~~~i~~~d~~~~~~~~--------l~~~-~~~~~~~~s 362 (415)
T 2hqs_A 298 INGGAP-QRITW--EGSQNQDADVSSDGK---FMVMVSSNGGQQHIAKQDLATGGVQV--------LSST-FLDETPSLA 362 (415)
T ss_dssp TTSSCC-EECCC--SSSEEEEEEECTTSS---EEEEEEECSSCEEEEEEETTTCCEEE--------CCCS-SSCEEEEEC
T ss_pred CCCCCE-EEEec--CCCcccCeEECCCCC---EEEEEECcCCceEEEEEECCCCCEEE--------ecCC-CCcCCeEEc
Confidence 988764 33322 234688999999999 88888764 589999998764311 1100 011123455
Q ss_pred ccccceeeeccCCCccccEEEEEEeCC---cEEEEEE
Q 019349 286 PADHHVLRNAFPAGVKRASVSVITYNG---YFVEYIF 319 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~dg---~v~~~~~ 319 (342)
|+ +..|++++.|+ .|++|++
T Consensus 363 pd--------------g~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 363 PN--------------GTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp TT--------------SSEEEEEEEETTEEEEEEEET
T ss_pred CC--------------CCEEEEEEcCCCccEEEEEEC
Confidence 54 47888888876 5666654
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=4.7e-20 Score=163.82 Aligned_cols=277 Identities=10% Similarity=0.028 Sum_probs=181.3
Q ss_pred EEEcCCCCE-EEEEcCCc-EEEEeCCCCcEEEEEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE-
Q 019349 13 VSFNQDNSG-FALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA- 87 (342)
Q Consensus 13 l~fs~d~~~-la~g~~~g-~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~- 87 (342)
..|.+++++ ++++..++ +++||+.++++...... ... .+.+.++++.+++++. .++.|.+||..+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~------~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSD------FCQTLVQIETQLEPPK 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEES------TTCEEEEEECSSSSCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeC------CCCeEEEEECCCCcee
Confidence 456777766 45555554 79999999987655443 233 6667777777777765 378999999999987
Q ss_pred EEEEecCCceEE-EEEcCCeEEE-EE-CC----eEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccE
Q 019349 88 LRELNFLTSILA-VRLNKKRLVI-VL-RE----KTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 88 ~~~~~~~~~v~~-i~~~~~~~~~-~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
...+........ ++++++...+ +. ++ .|++||+.+++.+..+..... ...++++|++.++++++. .++.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~-~~~~ 151 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD---AVGIAISPNGNGLILIDR-SSAN 151 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT---EEEEEECTTSSCEEEEEE-TTTT
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC---ccceEECCCCCEEEEEec-CCCc
Confidence 666666555555 8998874322 33 33 899999999988888765443 356777888876665553 3566
Q ss_pred -EEEEEccCCcee----EEEecccCCeeEEEECCCCCEEEEEe-CCCcEEEEEEcCCCee---EEEeccCcCceeEEEEE
Q 019349 161 -VLVYNVMELHSH----CEIDAHQAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVSEATK---SYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 161 -i~iwd~~~~~~~----~~~~~h~~~v~~i~~s~dg~~lat~s-~dg~~irlwd~~~~~~---~~~~~~~~~~~~v~~l~ 231 (342)
|.+|++.....+ .....+...+..++|+|||++|+.++ .+++ |++||+.+++. +..+..+ ..+..++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~~---~~~~~~~ 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGTN---NLPGTIV 227 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEECS---SCCCCEE
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccCC---CCCceEE
Confidence 999998754332 11223445689999999999776665 4565 68999999887 7666533 3467899
Q ss_pred EecCCCcccEEEEEe-CCCcEEEEecCCCCCCCCCCCcccccccc--ccccccccccccccceeeeccCCCccccEEEEE
Q 019349 232 FGQSMQFQDILVATS-SSGSLHVFSPGFAINQRRGGRTSSILGSI--LPESVNEVLDPADHHVLRNAFPAGVKRASVSVI 308 (342)
Q Consensus 232 fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (342)
|+||++ +|++++ .++.|.+||+++.+..... .+...+ .+..... ...+.+.+++.+|+++
T Consensus 228 ~spdg~---~l~v~~~~~~~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~~----------~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 228 VSRDGS---TVYVLTESTVDVFNFNQLSGTLSFVK----SFGHGLLIDPRPLFG----------ANQMALNKTETKLFIS 290 (331)
T ss_dssp ECTTSS---EEEEECSSEEEEEEEETTTTEEEEEE----EEECCCCCCCGGGTT----------CCCEEECTTSSEEEEE
T ss_pred ECCCCC---EEEEEEcCCCEEEEEECCCCceeeec----ccccccccCCCCccc----------ccceEECCCCCEEEEe
Confidence 999998 777665 5788999999876431100 000000 0000000 0122345555788777
Q ss_pred Ee-CCcEEEEEEec
Q 019349 309 TY-NGYFVEYIFSI 321 (342)
Q Consensus 309 ~~-dg~v~~~~~~~ 321 (342)
+. +|.+++|++..
T Consensus 291 ~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 291 ANISRELKVFTISG 304 (331)
T ss_dssp ETTTTEEEEEETTS
T ss_pred cCCCCcEEEEEecC
Confidence 76 55899998754
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=1.1e-19 Score=161.54 Aligned_cols=242 Identities=11% Similarity=0.093 Sum_probs=168.3
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-C-cEEEEeCCCCcE-EEEEee-CCEEE-EEEcCCCCeEEEEcCCCCCCCCCC--eEEE
Q 019349 7 SYPVFFVSFNQDNSGFALSTK-D-GFKIFDSSTGRL-CYERAV-GAFSI-VEMLYSSSLLAIVGAGEQPSLSPR--RLCL 79 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~-~-g~~v~d~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~d~--~i~i 79 (342)
..++ +++|+|||++|++++. + .+.+||+.++++ ...... ..... +.+.++++.++ ++.+ .++ .|.+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~-----~~~~~~i~v 112 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTG-----LNHPFNMQS 112 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCC-----SSSSCEEEE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecC-----CCCcccEEE
Confidence 3445 9999999997765543 3 479999998876 433322 22233 67777888877 4442 123 9999
Q ss_pred EECCCCcEEEEEecCCceEEEEEcCCe--EEEEE--CCe-EEEEECCCCceeeEE--eCCCCCceEEEEeeCCCccEEEE
Q 019349 80 FNTTTGTALRELNFLTSILAVRLNKKR--LVIVL--REK-TYIYDANTLAILDTI--DTVPNLKGLCAFSPSLNACFLAV 152 (342)
Q Consensus 80 wd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~--d~~-i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~ 152 (342)
||+.+++.+..+.......+++++++. ++++. ++. +.+|++.....+... ...........++++|++.++++
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 999999998888887788999999884 55554 467 999999764332111 10011234567778888887666
Q ss_pred eCCCCccEEEEEEccCCce---eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCee--EEEeccC--cCce
Q 019349 153 PASTTKGSVLVYNVMELHS---HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK--SYSFRRG--TYPS 225 (342)
Q Consensus 153 ~~~~~~g~i~iwd~~~~~~---~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~--~~~~~~~--~~~~ 225 (342)
++. .++.|.+||+.+++. +..+..+ ..+..++|+|||++|+.++.....|.+||+.+++. +..+..+ ..+.
T Consensus 193 ~~~-~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 3u4y_A 193 ANL-IGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPR 270 (331)
T ss_dssp EET-TTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCG
T ss_pred EeC-CCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCC
Confidence 654 579999999998887 7777654 56789999999998877665333468999999876 4444322 1111
Q ss_pred e---EEEEEEecCCCcccEEEEEe-CCCcEEEEecCCCC
Q 019349 226 T---IFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAI 260 (342)
Q Consensus 226 ~---v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~ 260 (342)
. ...++|+||++ +|++++ .+++|++||+....
T Consensus 271 ~~~~~~~~~~spdg~---~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 271 PLFGANQMALNKTET---KLFISANISRELKVFTISGKV 306 (331)
T ss_dssp GGTTCCCEEECTTSS---EEEEEETTTTEEEEEETTSCE
T ss_pred CcccccceEECCCCC---EEEEecCCCCcEEEEEecCCc
Confidence 1 35689999998 776555 56799999997654
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1.3e-20 Score=185.78 Aligned_cols=235 Identities=10% Similarity=0.029 Sum_probs=169.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-Cc------EEEEeCCCCcEEEEEee--CC------------------------EEEEE
Q 019349 7 SYPVFFVSFNQDNSGFALSTK-DG------FKIFDSSTGRLCYERAV--GA------------------------FSIVE 53 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~-~g------~~v~d~~~~~~~~~~~~--~~------------------------~~~~~ 53 (342)
...|.+++|||||++|++++. ++ +++||+.+++....... .. +..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999998876 54 79999999865433321 11 34567
Q ss_pred EcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC---cEEEEEecCCceEEEEEcCCe--EEEEECCeEEEEECCCCceeeE
Q 019349 54 MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG---TALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANTLAILDT 128 (342)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~---~~~~~~~~~~~v~~i~~~~~~--~~~~~d~~i~i~d~~~~~~~~~ 128 (342)
+.++++.+++.+. ++|.+||+.++ +......+...+..+.|+|++ ++.+.++.|++||+.+++....
T Consensus 116 ~SpDg~~l~~~~~--------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECTTSSEEEEEET--------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEEC
T ss_pred ECCCCCEEEEEeC--------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEe
Confidence 7788888887763 69999999988 543333344679999999986 4444588999999998765533
Q ss_pred EeCCCCCc--------------eEEEEeeCCCccEEEEeCCCCcc---------------------------------EE
Q 019349 129 IDTVPNLK--------------GLCAFSPSLNACFLAVPASTTKG---------------------------------SV 161 (342)
Q Consensus 129 ~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~~~~g---------------------------------~i 161 (342)
...+.... ....++++||+..|+++.. ++ .|
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~--d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI--DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE--ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE--cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 22221100 0245677888888888752 33 78
Q ss_pred EEEEccC-CceeEEEe--cccCCeeEEEECCCCCEEEEEeC-----CCcEEEEEEcCCCeeEEEeccCcCce---eEEEE
Q 019349 162 LVYNVME-LHSHCEID--AHQAPLAAIVLSSNGMYIATASE-----QGTIIRVFLVSEATKSYSFRRGTYPS---TIFSL 230 (342)
Q Consensus 162 ~iwd~~~-~~~~~~~~--~h~~~v~~i~~s~dg~~lat~s~-----dg~~irlwd~~~~~~~~~~~~~~~~~---~v~~l 230 (342)
.+||+.+ ++...... .|...+..++| |||++|++++. +.+ |++||+.+++....+..+. .. .+.++
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~~-~~~~~~~~~~ 342 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHETS-PTWVPLHNSL 342 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEEC-SSCCCCCSCC
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcCC-CCcCCcCCce
Confidence 8999988 77554332 47788999999 99999998764 344 6899999998765553221 11 24578
Q ss_pred EEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 231 SFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 231 ~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+|+||++ ++++++.||+++||.++
T Consensus 343 ~~spdg~---~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 343 RFLDDGS---ILWSSERTGFQHLYRID 366 (741)
T ss_dssp EECTTSC---EEEEECTTSSCEEEEEC
T ss_pred EECCCCe---EEEEecCCCccEEEEEc
Confidence 9999999 99999999999999876
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=4.3e-20 Score=163.91 Aligned_cols=258 Identities=10% Similarity=0.054 Sum_probs=180.0
Q ss_pred CEEEEEcCCc-EEEEeCCCCcEEEEEeeC----CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC
Q 019349 20 SGFALSTKDG-FKIFDSSTGRLCYERAVG----AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (342)
Q Consensus 20 ~~la~g~~~g-~~v~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~ 94 (342)
++|++++.++ +++||+.+++.+.....+ ....+.+.++++.+++++. .++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN------KSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET------TTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC------CCCeEEEEECCCCCeEeeEEcC
Confidence 3566666554 799999999877655432 3555677777777766654 3789999999999988877764
Q ss_pred C------ceEEEEEcCCe--EEEEE-------------CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 95 T------SILAVRLNKKR--LVIVL-------------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 95 ~------~v~~i~~~~~~--~~~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
. .+..+.++++. ++++. ++.|++||+.+++.+..+..... ...++++|++.+++++
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ---ITMLAWARDGSKLYGL 152 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS---CCCEEECTTSSCEEEE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC---cceeEECCCCCEEEEe
Confidence 4 67788898764 44552 48999999999988887765433 3344567777777766
Q ss_pred CCCCccEEEEEEccCCceeEEEeccc--CCeeEEEECCCCCEEEEEeCCCcE-----------------------EEEEE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQ--APLAAIVLSSNGMYIATASEQGTI-----------------------IRVFL 208 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~--~~v~~i~~s~dg~~lat~s~dg~~-----------------------irlwd 208 (342)
+ +.|.+||+.+++.+..+..+. .++ .|+|||++|+.++..+.. +.+||
T Consensus 153 ~----~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 225 (337)
T 1pby_B 153 G----RDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225 (337)
T ss_dssp S----SSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEE
T ss_pred C----CeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEe
Confidence 3 679999999998887776544 333 789999987766554432 47999
Q ss_pred cCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccc
Q 019349 209 VSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPAD 288 (342)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
+.+++.. .+........+.+++|+||++ +|+++ ++.|++||+++.+.... +. .........|
T Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~s~dg~---~l~~~--~~~v~~~d~~~~~~~~~-------~~-~~~~~~~~~~---- 287 (337)
T 1pby_B 226 LETGEMA-MREVRIMDVFYFSTAVNPAKT---RAFGA--YNVLESFDLEKNASIKR-------VP-LPHSYYSVNV---- 287 (337)
T ss_dssp TTTCCEE-EEEEEECSSCEEEEEECTTSS---EEEEE--ESEEEEEETTTTEEEEE-------EE-CSSCCCEEEE----
T ss_pred CCCCCce-EeecCCCCCceeeEEECCCCC---EEEEe--CCeEEEEECCCCcCcce-------ec-CCCceeeEEE----
Confidence 9998765 332222334578899999999 88887 79999999886543221 00 0000111233
Q ss_pred cceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 289 HHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
.+++++|++++.||.|++|++..
T Consensus 288 ----------s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 288 ----------STDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp ----------CTTSCEEEEESBSSEEEEEETTT
T ss_pred ----------CCCCCEEEEEcCCCcEEEEECcC
Confidence 44447899999999999997543
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=3.9e-19 Score=163.68 Aligned_cols=226 Identities=15% Similarity=0.070 Sum_probs=165.4
Q ss_pred CCEEEEEcC-------CcEEEEeCCCCcE-EEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEE
Q 019349 19 NSGFALSTK-------DGFKIFDSSTGRL-CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRE 90 (342)
Q Consensus 19 ~~~la~g~~-------~g~~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~ 90 (342)
+..++.++. ..+++||++.... .+..+...+..+.+.++++.+++++... .+..|++||+.+++....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~----~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES----GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC----CCcEEEEEECCCCcEEEe
Confidence 556655443 2479999986543 2334556788888999999998887520 135999999999988765
Q ss_pred EecCCceEEEEEcCCeE--EEEE--C--CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCcc--EEE
Q 019349 91 LNFLTSILAVRLNKKRL--VIVL--R--EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG--SVL 162 (342)
Q Consensus 91 ~~~~~~v~~i~~~~~~~--~~~~--d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g--~i~ 162 (342)
..+...+.+++|+|+.. ++.. + ..|++||+.+++. ..+.. +...+..++++|++..|++.+. .+| .|.
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~--~~~~~~~~~~spdg~~l~~~s~-~~g~~~i~ 294 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD--GRSNNTEPTWFPDSQNLAFTSD-QAGRPQVY 294 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC--CSSCEEEEEECTTSSEEEEEEC-TTSSCEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC--CCCcccceEECCCCCEEEEEEC-CCCCcEEE
Confidence 55667899999998863 3233 3 3699999998765 33333 2345677888899998887763 244 788
Q ss_pred EEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCC--cEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCccc
Q 019349 163 VYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQG--TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 240 (342)
Q Consensus 163 iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg--~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~ 240 (342)
+||+.+++. ..+..|...+.+++|+|||++|++++.++ ..|++||+.+++.. .+..+ . .+.+++|+||++
T Consensus 295 ~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~--~-~~~~~~~spdg~--- 366 (415)
T 2hqs_A 295 KVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST--F-LDETPSLAPNGT--- 366 (415)
T ss_dssp EEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS--S-SCEEEEECTTSS---
T ss_pred EEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC--C-CcCCeEEcCCCC---
Confidence 889888764 44566778899999999999999988751 24689999988763 44332 2 688999999999
Q ss_pred EEEEEeCCC---cEEEEecCCCC
Q 019349 241 ILVATSSSG---SLHVFSPGFAI 260 (342)
Q Consensus 241 ~l~~~s~dg---~i~vwd~~~~~ 260 (342)
+|++++.++ .|++||++...
T Consensus 367 ~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 367 MVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEEEEETTEEEEEEEETTSCC
T ss_pred EEEEEEcCCCccEEEEEECCCCc
Confidence 899988877 79999987543
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=1.3e-19 Score=160.73 Aligned_cols=240 Identities=9% Similarity=0.036 Sum_probs=173.2
Q ss_pred CeEEEEEcCCCCEEEE-EcCCc-EEEEeCCCCcEEEEEeeC-------CEEEEEEcCCCCeEEEEcCCC---CCCC--CC
Q 019349 9 PVFFVSFNQDNSGFAL-STKDG-FKIFDSSTGRLCYERAVG-------AFSIVEMLYSSSLLAIVGAGE---QPSL--SP 74 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~-g~~~g-~~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~---~~~~--~d 74 (342)
.+.+++|+|||+++++ +..++ +.+||+.+++.+.....+ ....+.+.++++.++++..+. .... .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4788999999987654 44444 799999998776544321 233456667777777664100 0000 26
Q ss_pred CeEEEEECCCCcEEEEEecCCceEEEEEcCCeE-EEEECCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 75 RRLCLFNTTTGTALRELNFLTSILAVRLNKKRL-VIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
+.|.+||+.+++.+..+.....+.++.++++.. +++.++.|++||+.+++.+..+......... .++|++..++..
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeee
Confidence 899999999999888887777788899988753 3344889999999999888777654422222 345555555444
Q ss_pred CCCCcc-----------------------EEEEEEccCCcee-EEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEc
Q 019349 154 ASTTKG-----------------------SVLVYNVMELHSH-CEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLV 209 (342)
Q Consensus 154 ~~~~~g-----------------------~i~iwd~~~~~~~-~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~ 209 (342)
+. .++ .|.+||+.+++.. ..+..|...+.+++|+|||++|+++ ++. |++||+
T Consensus 192 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~~~d~ 267 (337)
T 1pby_B 192 HE-SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LESFDL 267 (337)
T ss_dssp CT-TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EEEEET
T ss_pred cc-CCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EEEEEC
Confidence 32 222 5789999988764 3344567788999999999999988 566 589999
Q ss_pred CCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 210 SEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.+++.+..+..+ ..+.+++|+||++ +|++++.++.|++||+++.+.
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~s~dg~---~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 268 EKNASIKRVPLP---HSYYSVNVSTDGS---TVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp TTTEEEEEEECS---SCCCEEEECTTSC---EEEEESBSSEEEEEETTTCCE
T ss_pred CCCcCcceecCC---CceeeEEECCCCC---EEEEEcCCCcEEEEECcCCcE
Confidence 999888777533 3467899999999 899999999999999987654
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=1.7e-20 Score=184.27 Aligned_cols=243 Identities=11% Similarity=-0.010 Sum_probs=167.1
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEeeC-----CEEEEEEcCCCCeEEEEcCCCCC--CCCCCeEEEE
Q 019349 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVG-----AFSIVEMLYSSSLLAIVGAGEQP--SLSPRRLCLF 80 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~--~~~d~~i~iw 80 (342)
..+.+++|+|||++++++.+..+++||+.+++.......+ .+..+.+.++++.+++.+..... ...++.+.+|
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4577899999999877754445899999988765444332 26678888999998888653211 1124789999
Q ss_pred ECCCCcEEEEEecC----CceEEEEEcCCe--EEEEECCeEEEEECCCCceeeEEeCCCCCc----------------eE
Q 019349 81 NTTTGTALRELNFL----TSILAVRLNKKR--LVIVLREKTYIYDANTLAILDTIDTVPNLK----------------GL 138 (342)
Q Consensus 81 d~~~~~~~~~~~~~----~~v~~i~~~~~~--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----------------~~ 138 (342)
|+.+++. ..+... ..+..++|+|++ ++.+.++.|++||+.+++..+....+.... ..
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9998876 333221 137788999875 555558899999999887655443322211 12
Q ss_pred EEEeeCCCccEEEEeCCCC--------------------------------ccEEEEEEccCCceeEEEecc------cC
Q 019349 139 CAFSPSLNACFLAVPASTT--------------------------------KGSVLVYNVMELHSHCEIDAH------QA 180 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~--------------------------------~g~i~iwd~~~~~~~~~~~~h------~~ 180 (342)
.+++++||+..|++++.+. +..|.+||+.+++....+..| ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 5678889999998875210 238999999988765666654 56
Q ss_pred CeeEEEECCCCCEEEEEeCCC---cEEEEEEcCCCeeEEEeccCcCceeE----EEEEEecCCCcccEEEE--EeCCC--
Q 019349 181 PLAAIVLSSNGMYIATASEQG---TIIRVFLVSEATKSYSFRRGTYPSTI----FSLSFGQSMQFQDILVA--TSSSG-- 249 (342)
Q Consensus 181 ~v~~i~~s~dg~~lat~s~dg---~~irlwd~~~~~~~~~~~~~~~~~~v----~~l~fs~d~~~~~~l~~--~s~dg-- 249 (342)
.+..++|||||++|++.+.++ ..|++||+.+++....+..+ +...+ ..++||||++ .|+. +..++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~---~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGR---KFFFIRAIPQGGR 331 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSC---SEEEEEEECCSSS
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCC---eEEEEEecccCCC
Confidence 799999999999998775432 34689999998865544321 11222 3689999998 6665 45666
Q ss_pred ----cEEEEe
Q 019349 250 ----SLHVFS 255 (342)
Q Consensus 250 ----~i~vwd 255 (342)
.|.+||
T Consensus 332 ~~~~~l~~~d 341 (723)
T 1xfd_A 332 GKFYHITVSS 341 (723)
T ss_dssp SCEEEEEEEC
T ss_pred cceeEEEEEe
Confidence 456666
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=6.2e-19 Score=156.78 Aligned_cols=270 Identities=11% Similarity=0.098 Sum_probs=169.8
Q ss_pred EEEEcCC-cEEEEeCC-CCcE--EEEE-eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC--CCc--EEEEEe
Q 019349 22 FALSTKD-GFKIFDSS-TGRL--CYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGT--ALRELN 92 (342)
Q Consensus 22 la~g~~~-g~~v~d~~-~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~--~~~--~~~~~~ 92 (342)
+++++.+ .+++|+++ +++. .... +...+..+.+.++++.+++++. .++.|.+|++. +++ .+..+.
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR------PEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET------TTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec------CCCeEEEEEecCCCCceeeccccc
Confidence 3443544 47999985 3432 2222 2344556778888888877765 25899999987 555 344555
Q ss_pred cCCceEEEEEcCCe--EEEEE--CCeEEEEECCC---CceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEE
Q 019349 93 FLTSILAVRLNKKR--LVIVL--REKTYIYDANT---LAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYN 165 (342)
Q Consensus 93 ~~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd 165 (342)
....+..++++++. ++++. ++.|++||+.+ .+.+..+.... .+.+++++|++..+++++. .++.|.+||
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~-~~~~v~~~d 157 (343)
T 1ri6_A 82 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---GCHSANISPDNRTLWVPAL-KQDRICLFT 157 (343)
T ss_dssp CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---TBCCCEECTTSSEEEEEEG-GGTEEEEEE
T ss_pred cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC---CceEEEECCCCCEEEEecC-CCCEEEEEE
Confidence 55688899998875 44455 67899999943 33444443332 2445567778877776653 479999999
Q ss_pred ccC-CceeE----EEec-ccCCeeEEEECCCCCEEEEEe-CCCcEEEEEEcCC--Cee--EEEec---cC-cCceeEEEE
Q 019349 166 VME-LHSHC----EIDA-HQAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVSE--ATK--SYSFR---RG-TYPSTIFSL 230 (342)
Q Consensus 166 ~~~-~~~~~----~~~~-h~~~v~~i~~s~dg~~lat~s-~dg~~irlwd~~~--~~~--~~~~~---~~-~~~~~v~~l 230 (342)
+.+ ++... .+.. ....+.+++|+|+|++|+.++ .+++ +++||+.. ++. ...+. .+ .....+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 987 54332 2333 345788999999999876665 6666 68999953 432 22221 11 012246789
Q ss_pred EEecCCCcccEEE-EEeCCCcEEEEecCCCCCCCCCCCccccccccc--cccccccccccccceeeeccCCCccccEEEE
Q 019349 231 SFGQSMQFQDILV-ATSSSGSLHVFSPGFAINQRRGGRTSSILGSIL--PESVNEVLDPADHHVLRNAFPAGVKRASVSV 307 (342)
Q Consensus 231 ~fs~d~~~~~~l~-~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
+|+||++ +|+ +...++.|++||++...... ..+..+. .......| .++++.|++
T Consensus 237 ~~s~dg~---~l~v~~~~~~~i~v~d~~~~~~~~------~~~~~~~~~~~~~~~~~--------------s~dg~~l~~ 293 (343)
T 1ri6_A 237 HITPDGR---HLYACDRTASLITVFSVSEDGSVL------SKEGFQPTETQPRGFNV--------------DHSGKYLIA 293 (343)
T ss_dssp EECTTSS---EEEEEETTTTEEEEEEECTTSCCE------EEEEEEECSSSCCCEEE--------------CTTSSEEEE
T ss_pred EECCCCC---EEEEEecCCCEEEEEEEcCCCCce------EEeeeecCCCccceEEE--------------CCCCCEEEE
Confidence 9999998 666 45578999999997321100 0010000 00111233 344477888
Q ss_pred EE-eCCcEEEEEEecCCCC
Q 019349 308 IT-YNGYFVEYIFSINNCC 325 (342)
Q Consensus 308 ~~-~dg~v~~~~~~~~~~~ 325 (342)
++ .||.+.+|+++++.+.
T Consensus 294 ~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 294 AGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp ECTTTCEEEEEEEETTTTE
T ss_pred ecCCCCeEEEEEEcCCCce
Confidence 88 5899999999876553
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=3.6e-19 Score=158.33 Aligned_cols=237 Identities=13% Similarity=0.112 Sum_probs=162.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC--cEEEEeCC--CCcEE--EEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKD--GFKIFDSS--TGRLC--YERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~--g~~v~d~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
+...+.+++|+|+|++|++++.+ .+++|+++ +++.. .... .+.+..+.+.++++.+++.+. .++.|.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~i~ 109 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY------NAGNVS 109 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET------TTTEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec------CCCeEE
Confidence 44578899999999988877663 47999987 55533 2222 134455677778887777664 378999
Q ss_pred EEEC---CCCcEEEEEecCCceEEEEEcCCe--EEEEE--CCeEEEEECCC-Cceee----EEeCCCCCceEEEEeeCCC
Q 019349 79 LFNT---TTGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDANT-LAILD----TIDTVPNLKGLCAFSPSLN 146 (342)
Q Consensus 79 iwd~---~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~~-~~~~~----~~~~~~~~~~~~~~~~~~~ 146 (342)
+||+ .+++.+..+.....+.+++++++. ++++. ++.|++||+.+ ++... .+.... ......++++|+
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pd 188 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPN 188 (343)
T ss_dssp EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTT
T ss_pred EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCC
Confidence 9999 444455555556678889998874 45554 68999999987 54432 222222 234556778888
Q ss_pred ccEEEEeCCCCccEEEEEEccC--Cce--eEEEe---c-c--cCCeeEEEECCCCCEEEEEe-CCCcEEEEEEcC--CC-
Q 019349 147 ACFLAVPASTTKGSVLVYNVME--LHS--HCEID---A-H--QAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVS--EA- 212 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~--~~~--~~~~~---~-h--~~~v~~i~~s~dg~~lat~s-~dg~~irlwd~~--~~- 212 (342)
+.++++++. .++.|.+||+.. ++. ...+. . | ...+..++|+|+|++|+.+. .++. |++||+. ++
T Consensus 189 g~~l~~~~~-~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~~~ 266 (343)
T 1ri6_A 189 EQYAYCVNE-LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDGSV 266 (343)
T ss_dssp SSEEEEEET-TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTSCC
T ss_pred CCEEEEEeC-CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCCCc
Confidence 887766554 579999999953 332 22222 1 1 23566899999999887554 6776 6899998 33
Q ss_pred -eeEEEeccCcCceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecC
Q 019349 213 -TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPG 257 (342)
Q Consensus 213 -~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~ 257 (342)
+.+..+..+ ..+.+++|+|+++ +|++++ .++.|.+|+++
T Consensus 267 ~~~~~~~~~~---~~~~~~~~s~dg~---~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 267 LSKEGFQPTE---TQPRGFNVDHSGK---YLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEEEECS---SSCCCEEECTTSS---EEEEECTTTCEEEEEEEE
T ss_pred eEEeeeecCC---CccceEEECCCCC---EEEEecCCCCeEEEEEEc
Confidence 344444322 2277899999998 888887 68999999765
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=2.2e-19 Score=160.25 Aligned_cols=227 Identities=8% Similarity=0.051 Sum_probs=165.4
Q ss_pred EEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeC---CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 12 FVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVG---AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
.+++++++.++++++.++ +.+||+.+++.+.....+ ....+.+.++++.+++.+. .++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~------~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN------HYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET------TTTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC------CCCcEEEEeCCCCcE
Confidence 457888998888876665 799999999876554432 3455677777776666654 378999999999998
Q ss_pred EEEEecCC-------ceEEEEEcCCe--EEEEE-C------------CeEEEEECCCCce---eeEEeCCCCCceEEEEe
Q 019349 88 LRELNFLT-------SILAVRLNKKR--LVIVL-R------------EKTYIYDANTLAI---LDTIDTVPNLKGLCAFS 142 (342)
Q Consensus 88 ~~~~~~~~-------~v~~i~~~~~~--~~~~~-d------------~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~ 142 (342)
+..+.... .+..+.++++. ++++. + +.|++||+.+++. +..+..+ ..+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~ 154 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP---RQVYLMR 154 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC---SSCCCEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC---Cccccee
Confidence 88777543 27788998874 45444 3 8999999988543 3334332 2355566
Q ss_pred eCCCccEEEEeCCCCccEEEEEEccCCceeEEEeccc-------------------------------------------
Q 019349 143 PSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQ------------------------------------------- 179 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~------------------------------------------- 179 (342)
++|++. +++.+ +.|.+||+.+++.+..+..+.
T Consensus 155 ~s~dg~-l~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 155 AADDGS-LYVAG----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp ECTTSC-EEEES----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred ECCCCc-EEEcc----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 777777 44444 239999999888776654331
Q ss_pred -------------------------CCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 180 -------------------------APLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 180 -------------------------~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
..+..++|+| ||++|+++ ++. |.+||+.+++.+..+..+ ..+.+++|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~~---~~~~~~~~s 303 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANLD---HTYYCVAFD 303 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEECS---SCCCEEEEC
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcCC---CCccceEEC
Confidence 1345678889 99999988 666 579999999988777533 236789999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
||++ +|++++.++.|++||+++.+.
T Consensus 304 ~dg~---~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 304 KKGD---KLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp SSSS---CEEEESBSSEEEEEETTTTEE
T ss_pred CCCC---EEEEecCCCeEEEEeccccce
Confidence 9998 788888899999999987654
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=3.8e-19 Score=174.36 Aligned_cols=237 Identities=16% Similarity=0.081 Sum_probs=163.8
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEE-eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC--
Q 019349 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-- 84 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~-- 84 (342)
..|.+++|||| ..++.+.+..+++||+.+++..... ....+..+.+.++++.++++. ++.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~--------~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR--------NHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE--------TTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE--------CCeEEEEecCccc
Confidence 57999999999 7777777777899999988654332 224455567888888888863 57999999988
Q ss_pred ---CcEEEEEecCCc---------------eEEEEEcCCe--EEEEE-C-------------------------------
Q 019349 85 ---GTALRELNFLTS---------------ILAVRLNKKR--LVIVL-R------------------------------- 112 (342)
Q Consensus 85 ---~~~~~~~~~~~~---------------v~~i~~~~~~--~~~~~-d------------------------------- 112 (342)
++.......... +.++.|+|+. ++.+. |
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 776543332222 4789999875 33333 1
Q ss_pred --CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC---CccEEEEEEccCCceeEEEe--cccC---Ce
Q 019349 113 --EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST---TKGSVLVYNVMELHSHCEID--AHQA---PL 182 (342)
Q Consensus 113 --~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~g~i~iwd~~~~~~~~~~~--~h~~---~v 182 (342)
..|++||+.+++.........+...+..++++||+..|++...+ ....|.+||+.+++....+. .+.. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 47999999988654332222334567788889999988876521 12489999999984433332 2222 35
Q ss_pred eEEEECC--CCCEEEEEeCCCcEEEEEEcC-CCeeEEEeccCcCceeEEE-EEEecCCCcccEEEEEeC-CC----cEEE
Q 019349 183 AAIVLSS--NGMYIATASEQGTIIRVFLVS-EATKSYSFRRGTYPSTIFS-LSFGQSMQFQDILVATSS-SG----SLHV 253 (342)
Q Consensus 183 ~~i~~s~--dg~~lat~s~dg~~irlwd~~-~~~~~~~~~~~~~~~~v~~-l~fs~d~~~~~~l~~~s~-dg----~i~v 253 (342)
.+++|+| ||++|++++.||. ++||++. +++.+..+..+ ...+.+ ++|+||++ .|+.++. ++ .|..
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~~--~~~v~~~~~~spdg~---~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTKG--EWEVTNFAGFDPKGT---RLYFESTEASPLERHFYC 386 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCCS--SSCEEEEEEECTTSS---EEEEEESSSCTTCBEEEE
T ss_pred CCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCCC--CeEEEeeeEEcCCCC---EEEEEecCCCCceEEEEE
Confidence 7789999 9999999999987 4899886 66666666443 334665 79999998 6765554 44 4566
Q ss_pred EecCCC
Q 019349 254 FSPGFA 259 (342)
Q Consensus 254 wd~~~~ 259 (342)
||+++.
T Consensus 387 ~d~~~~ 392 (706)
T 2z3z_A 387 IDIKGG 392 (706)
T ss_dssp EETTCC
T ss_pred EEcCCC
Confidence 666544
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=3.6e-18 Score=152.70 Aligned_cols=247 Identities=10% Similarity=0.002 Sum_probs=177.5
Q ss_pred CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe--EEEEE--CCeEEEEECCC
Q 019349 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDANT 122 (342)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~~ 122 (342)
.....+.+.++++.+++.+.+..+...+++|.+||..+++.+..+.....+..+.++++. ++++. ++.|.+||..+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 455667777888888776643111112679999999999999988877778888888763 55555 57999999999
Q ss_pred CceeeEEeCCCCC-------ceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEE
Q 019349 123 LAILDTIDTVPNL-------KGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIA 195 (342)
Q Consensus 123 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~la 195 (342)
++.+..+..+... .....+..+|++..+++++...++.|.+||+.+++.+..+..+...+.+++|+|||++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLY 200 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEE
Confidence 9988888764322 135566777777776665521478999999999998888876677789999999999999
Q ss_pred EEeCCCcEEEEEEcCCCeeEEEeccCc--CceeEEEEEEecCCCcccEEEEEeC-CCcEEEEecCCCCCCCCCCCccccc
Q 019349 196 TASEQGTIIRVFLVSEATKSYSFRRGT--YPSTIFSLSFGQSMQFQDILVATSS-SGSLHVFSPGFAINQRRGGRTSSIL 272 (342)
Q Consensus 196 t~s~dg~~irlwd~~~~~~~~~~~~~~--~~~~v~~l~fs~d~~~~~~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~ 272 (342)
+++.++.+ .+||+.+++.+..+..+. ....+.+++|+|+++ +|++++. ++.|++||+++.+......
T Consensus 201 ~~~~~~~i-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~l~~~~~~~~~v~~~d~~~~~~~~~~~------ 270 (353)
T 3vgz_A 201 TTNADGEL-ITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ---RAFITDSKAAEVLVVDTRNGNILAKVA------ 270 (353)
T ss_dssp EECTTSEE-EEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT---EEEEEESSSSEEEEEETTTCCEEEEEE------
T ss_pred EEcCCCeE-EEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC---EEEEEeCCCCEEEEEECCCCcEEEEEE------
Confidence 99999875 699999999887775422 133478899999998 7766665 5899999997765422100
Q ss_pred cccccccccccccccccceeeeccCCCccccEEEEEE-eCCcEEEEEEe
Q 019349 273 GSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT-YNGYFVEYIFS 320 (342)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~v~~~~~~ 320 (342)
.+......|+ ++++++++.+ .++.|++|+..
T Consensus 271 ---~~~~~~~~~s--------------~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 271 ---APESLAVLFN--------------PARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp ---CSSCCCEEEE--------------TTTTEEEEEETTTTEEEEEETT
T ss_pred ---cCCCceEEEC--------------CCCCEEEEEECCCCeEEEEECC
Confidence 0111112333 3346676666 58888888653
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=3.1e-19 Score=174.96 Aligned_cols=234 Identities=10% Similarity=0.033 Sum_probs=159.9
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcE--EEEEe-e-----------------CCEEEEEEcCCCCeEEEEcCCC
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRL--CYERA-V-----------------GAFSIVEMLYSSSLLAIVGAGE 68 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~--~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~g~ 68 (342)
.+..++|. |+.++.++.+++ +||+.+++. ..-.. . ..+..+.+.++ +.+++..
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~--- 99 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT--- 99 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE---
T ss_pred cCCCCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE---
Confidence 34557777 556666667789 999998865 21111 1 34666777777 6666553
Q ss_pred CCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe--EEEEECCeEEEEECCC-----CceeeEEeCCCCCc-----
Q 019349 69 QPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANT-----LAILDTIDTVPNLK----- 136 (342)
Q Consensus 69 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~~----- 136 (342)
+++|++||+.+++..........+.+++|+|++ ++.+.++.|++||+.+ ++............
T Consensus 100 -----~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 100 -----QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp -----TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred -----CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 579999999998776666566678889999875 4444589999999988 65543222211100
Q ss_pred -------eEEEEeeCCCccEEEEeCC-------------------------------CCccEEEEEEccCCceeEEE--e
Q 019349 137 -------GLCAFSPSLNACFLAVPAS-------------------------------TTKGSVLVYNVMELHSHCEI--D 176 (342)
Q Consensus 137 -------~~~~~~~~~~~~~l~~~~~-------------------------------~~~g~i~iwd~~~~~~~~~~--~ 176 (342)
.+.++.++||+.+|++++. ..+..|.+||+.+++..... .
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS
T ss_pred hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC
Confidence 1256778889999988751 13578999999988765433 2
Q ss_pred cccCCeeEEEECCCCCEEEEEeCCC----cEEEEEEcCCCeeEEEeccCcCce---eEEEEEEec--CCCcccEEEEEeC
Q 019349 177 AHQAPLAAIVLSSNGMYIATASEQG----TIIRVFLVSEATKSYSFRRGTYPS---TIFSLSFGQ--SMQFQDILVATSS 247 (342)
Q Consensus 177 ~h~~~v~~i~~s~dg~~lat~s~dg----~~irlwd~~~~~~~~~~~~~~~~~---~v~~l~fs~--d~~~~~~l~~~s~ 247 (342)
.|...+.+++|+|||++|++++.++ ..|++||+.+++....+....... .+.+++|+| |++ +|++++.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~---~l~~~~~ 331 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ---FIWQSRR 331 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE---EEEEECT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE---EEEEEcc
Confidence 5777899999999999999988775 135899999984433332111111 245789999 998 9999999
Q ss_pred CCcEEEEecC
Q 019349 248 SGSLHVFSPG 257 (342)
Q Consensus 248 dg~i~vwd~~ 257 (342)
|+.++||.++
T Consensus 332 ~g~~~l~~~~ 341 (706)
T 2z3z_A 332 DGWNHLYLYD 341 (706)
T ss_dssp TSSCEEEEEE
T ss_pred CCccEEEEEE
Confidence 9999999886
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=4.3e-19 Score=164.24 Aligned_cols=163 Identities=13% Similarity=0.130 Sum_probs=119.4
Q ss_pred EecCCceEEEEEcCCeEEEE----E---CCeEEEEECCCC--------ceeeEEeC-CCCCceEEEEeeCCC-ccEEEEe
Q 019349 91 LNFLTSILAVRLNKKRLVIV----L---REKTYIYDANTL--------AILDTIDT-VPNLKGLCAFSPSLN-ACFLAVP 153 (342)
Q Consensus 91 ~~~~~~v~~i~~~~~~~~~~----~---d~~i~i~d~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~-~~~l~~~ 153 (342)
+.+...|.+++|+++...++ + |+.|++||+.+. +.+..+.. ..+...+.+++++|+ +.+++++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 34456788888887754444 3 678888887653 22233332 123456778888887 6788888
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc-----CceeEE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-----YPSTIF 228 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~-----~~~~v~ 228 (342)
+ .||+|++||++++..+....+|...|++++|+|+|++||+|+.||+ |++||++ ++....+..+. +...|.
T Consensus 169 s--~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~-v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 169 L--ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT-VVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp E--TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC-EEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred E--CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc-EEEEccC-CcccccccCCcccCCCCceeEE
Confidence 7 6899999999998777777789999999999999999999999998 5899998 55555553321 123699
Q ss_pred EEEEecCCCcccEEEEE-eCCC------cEEEEecCCCC
Q 019349 229 SLSFGQSMQFQDILVAT-SSSG------SLHVFSPGFAI 260 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~-s~dg------~i~vwd~~~~~ 260 (342)
+++|++++. ++++. +.+| .+++|++....
T Consensus 245 ~v~w~~~~~---~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 245 DVLWIGTYV---FAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTE---EEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEecCce---EEEEEccCCCccCCCCceEEEEeccCC
Confidence 999999987 66443 3443 39999998653
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=6.1e-19 Score=173.74 Aligned_cols=234 Identities=6% Similarity=0.055 Sum_probs=168.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEeCCCC---cEE-EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTG---RLC-YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
.|.+++|||||++|++++...+.+||+.++ +.. ...+...+..+.+.++++.+++++. +.|.+||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--------~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--------RNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--------TEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--------CcEEEEecCC
Confidence 478999999999999988877899999887 432 2223356777889999999988863 5899999998
Q ss_pred CcEEEEEecCCc-----------------eEEEEEcCCe--EEEEE-CC-------------------------------
Q 019349 85 GTALRELNFLTS-----------------ILAVRLNKKR--LVIVL-RE------------------------------- 113 (342)
Q Consensus 85 ~~~~~~~~~~~~-----------------v~~i~~~~~~--~~~~~-d~------------------------------- 113 (342)
++.......... +.++.|+|+. ++++. ++
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 876543322221 4678999875 44443 43
Q ss_pred --eEEEEECCC-CceeeEEeCCCCCceEEEEeeCCCccEEEEeCC---CCccEEEEEEccCCceeEEEecccC----Cee
Q 019349 114 --KTYIYDANT-LAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS---TTKGSVLVYNVMELHSHCEIDAHQA----PLA 183 (342)
Q Consensus 114 --~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~g~i~iwd~~~~~~~~~~~~h~~----~v~ 183 (342)
.|++||+.+ ++.........+...+..+++ ||+..|++... ..+..|.+||+.+++....+..|.. .+.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 789999988 765433221133455677788 88888886531 1368899999999988777766554 457
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEEcC-CCeeEEEeccCcCceeEEEE-EEecCCCcccEEEE-EeCCC--cEEEEecCC
Q 019349 184 AIVLSSNGMYIATASEQGTIIRVFLVS-EATKSYSFRRGTYPSTIFSL-SFGQSMQFQDILVA-TSSSG--SLHVFSPGF 258 (342)
Q Consensus 184 ~i~~s~dg~~lat~s~dg~~irlwd~~-~~~~~~~~~~~~~~~~v~~l-~fs~d~~~~~~l~~-~s~dg--~i~vwd~~~ 258 (342)
+++|+|||+++++++.||. ++||.+. +++ ...+..+ ...+.++ +|+||++ .|+. ++.++ +++||+++.
T Consensus 341 ~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~~--~~~v~~~~~~s~dg~---~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGF-QHLYRIDSKGK-AAALTHG--NWSVDELLAVDEKAG---LAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CCEECTTSCEEEEECTTSS-CEEEEECSSSC-EEESCCS--SSCEEEEEEEETTTT---EEEEEECSSCTTCBEEEEEET
T ss_pred ceEECCCCeEEEEecCCCc-cEEEEEcCCCC-eeeeeec--ceEEEeEeEEeCCCC---EEEEEEeCCCCceEEEEEEEc
Confidence 8999999999999999987 4788775 445 5555433 3447776 5999998 6654 45555 899999864
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=6.3e-18 Score=151.30 Aligned_cols=235 Identities=11% Similarity=0.102 Sum_probs=155.7
Q ss_pred CCeEEEEEcCCCCEEEEEcC----CcEEEEeCCCCcEE--EE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 8 YPVFFVSFNQDNSGFALSTK----DGFKIFDSSTGRLC--YE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~----~g~~v~d~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
..+..++|+|||+ |++++. ..+.+|++.+++.. .. .+......+.+.++++.+++++. .+++|.+
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~------~~~~v~v 112 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY------HKGTAEV 112 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET------TTTEEEE
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC------CCCEEEE
Confidence 4566799999999 554433 34799999877542 22 12344556777888888877764 3789999
Q ss_pred EECC-CCc--EEEEEecC----------CceEEEEEcCCeEEEEE---CCeEEEEECC-CCceee--EEeCCCCCceEEE
Q 019349 80 FNTT-TGT--ALRELNFL----------TSILAVRLNKKRLVIVL---REKTYIYDAN-TLAILD--TIDTVPNLKGLCA 140 (342)
Q Consensus 80 wd~~-~~~--~~~~~~~~----------~~v~~i~~~~~~~~~~~---d~~i~i~d~~-~~~~~~--~~~~~~~~~~~~~ 140 (342)
||+. ++. .+..+... ..+.+++++++..+++. ++.|++|++. ++++.. .+.... ......
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-g~~p~~ 191 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA-GFGPRH 191 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT-TCCEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC-CCCCce
Confidence 9985 333 33333332 13788999887644444 6699999998 554332 222222 224556
Q ss_pred EeeCCCccEEEEeCCCCccEEEEEEccC--Cce--eEEEeccc------CCeeEEEECCCCCEEE-EEeCCCcEEEEEEc
Q 019349 141 FSPSLNACFLAVPASTTKGSVLVYNVME--LHS--HCEIDAHQ------APLAAIVLSSNGMYIA-TASEQGTIIRVFLV 209 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~~~g~i~iwd~~~--~~~--~~~~~~h~------~~v~~i~~s~dg~~la-t~s~dg~~irlwd~ 209 (342)
++++|++.++++++. .++.|.+|++.. ++. +..+.... ..+..++|+|||++|+ ++..+++ |++||+
T Consensus 192 ~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~~ 269 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGE-LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFAV 269 (347)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEEE
T ss_pred EEECCCCCEEEEEeC-CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEEE
Confidence 777888887776654 578999999874 442 23333322 3488999999999875 5555676 589999
Q ss_pred CC-C--eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC-CcEEEEecC
Q 019349 210 SE-A--TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-GSLHVFSPG 257 (342)
Q Consensus 210 ~~-~--~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d-g~i~vwd~~ 257 (342)
.. + +.+..+..+ ...+.+++|+||++ +|++++.+ +.|.+|+++
T Consensus 270 ~~~g~~~~~~~~~~~--~~~~~~~~~spdg~---~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 270 TADGHLTLIQQISTE--GDFPRDFDLDPTEA---FVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CGGGCEEEEEEEECS--SSCCCEEEECTTSS---EEEEEETTTTEEEEEEEC
T ss_pred CCCCcEEEeEEEecC--CCCcCeEEECCCCC---EEEEEEcCCCcEEEEEEe
Confidence 73 2 344444321 22467899999999 88888764 899999765
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=6.1e-19 Score=169.23 Aligned_cols=232 Identities=12% Similarity=0.092 Sum_probs=153.3
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Cc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE--EEC-
Q 019349 8 YPVFFVSFNQDNSGFALSTK-DG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL--FNT- 82 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~-~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i--wd~- 82 (342)
.+|++++|+|||++||.++. ++ ++||+++.++...-...+.-......++++.+++.+.... .+...++ ++.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~---g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSK---GAEQHALFKVNTS 98 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECST---TSCCEEEEEEETT
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCC---CCcceEEEEEecc
Confidence 47999999999999998765 55 6999987665433222221233344444444444332100 1344455 444
Q ss_pred CCCcEEEEEecCC--ceEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC--
Q 019349 83 TTGTALRELNFLT--SILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST-- 156 (342)
Q Consensus 83 ~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 156 (342)
..+... .+.... .+.++.++++.+++++ ++.+.+||+.+++.......+. ..++++||+..|++.+.+
T Consensus 99 ~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-----~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 99 RPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-----FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp STTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-----CEEEEEEETTEEEEEEEEET
T ss_pred CCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-----ceEEECCCCCEEEEEEEcCC
Confidence 122222 332222 3445555666666655 5566799998886554443222 455666788899876621
Q ss_pred CccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCC--cEEEEEEcCCCeeEEEeccCcCceeEEEEE---
Q 019349 157 TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQG--TIIRVFLVSEATKSYSFRRGTYPSTIFSLS--- 231 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg--~~irlwd~~~~~~~~~~~~~~~~~~v~~l~--- 231 (342)
..+.|++||+.+++.. .+..|...+..++|||||++|++++.+| + |++||+.+++.. .+..+ ...+..++
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~~~--~~~~~~~~~~~ 247 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLELP--SKDFSSYRPTA 247 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECCCS--CSHHHHHCCSE
T ss_pred CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-EccCC--CcChhhhhhcc
Confidence 1178999999887754 6778889999999999999999888887 5 579999988876 44322 22344445
Q ss_pred -----EecCCCcccEEEEEeCCCcEEEEec
Q 019349 232 -----FGQSMQFQDILVATSSSGSLHVFSP 256 (342)
Q Consensus 232 -----fs~d~~~~~~l~~~s~dg~i~vwd~ 256 (342)
|+||+. ++++++.|+++++|++
T Consensus 248 ~~~~~~spdg~---~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 248 ITWLGYLPDGR---LAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEECTTSC---EEEEEEETTEEEEEET
T ss_pred ccceeEcCCCc---EEEEEEcCCcEEEEEE
Confidence 999998 9999999999999998
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1e-18 Score=151.61 Aligned_cols=233 Identities=11% Similarity=-0.051 Sum_probs=162.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCC-CcEEEEEee---CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSST-GRLCYERAV---GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
+...|.+++|+|||++|++++++.+.+||+.+ ++....... ..+..+.+.++++.+++++.... ....|.+||
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~~ 116 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---GKSAIYLLP 116 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---SSCEEEEEE
T ss_pred CCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---CcceEEEEE
Confidence 46789999999999999999877889999998 765433222 23445678888888888773200 134555555
Q ss_pred CCCCcEEEEEecCCceEEEEEcCCe--EEEEE--CCeEEEEEC--CCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCC
Q 019349 82 TTTGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDA--NTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (342)
Q Consensus 82 ~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~--d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 155 (342)
..+++ ...+.....+..+.|+++. ++++. ++.+++|++ .+++. ..+. .....+..++++|++..+++++.
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 117 STGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLT--HGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp TTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECC--CSSSCEEEEEECTTSSEEEEEEC
T ss_pred CCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcc--cCCCccccceECCCCCEEEEEec
Confidence 55555 4445555568889998875 33233 788888885 33332 3332 23345677788888888887664
Q ss_pred CCccEEEEEEcc-CCceeEEEecccCCeeEEEECCCCCEEEEEeCCC----------cEEEEEEcCCCeeEEEeccCcCc
Q 019349 156 TTKGSVLVYNVM-ELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQG----------TIIRVFLVSEATKSYSFRRGTYP 224 (342)
Q Consensus 156 ~~~g~i~iwd~~-~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg----------~~irlwd~~~~~~~~~~~~~~~~ 224 (342)
.++.+++|++. .+..+..+..|...+.+++|+|+|++|++++.++ ..|.+||+.+++.........+.
T Consensus 193 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 193 -RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp -TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred -CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 47889999986 5566777888888999999999999999988763 23579999887653322111123
Q ss_pred eeEEEEEEecCCCcccEEEEEeCCC
Q 019349 225 STIFSLSFGQSMQFQDILVATSSSG 249 (342)
Q Consensus 225 ~~v~~l~fs~d~~~~~~l~~~s~dg 249 (342)
..+.+++|+||++ +|++++.+.
T Consensus 272 ~~~~~~~~spdg~---~l~~~~~~~ 293 (297)
T 2ojh_A 272 GTMNSPNWSPDGD---EFAYVRYFP 293 (297)
T ss_dssp TTSCSCCBCTTSS---EEEEEEECC
T ss_pred cccccceECCCCC---EEEEEEecc
Confidence 4578899999999 888887653
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=1.5e-17 Score=149.81 Aligned_cols=235 Identities=13% Similarity=0.130 Sum_probs=155.1
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-----cEEEEeCCC--CcEEE--EEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKD-----GFKIFDSST--GRLCY--ERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~-----g~~v~d~~~--~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (342)
...+..++|+|||++|++++.+ .+.+|+++. +++.. .... .....+.+ +.+.++++.. .++
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~------~~~ 120 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY------SGG 120 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET------TTT
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC------CCC
Confidence 3456678999999999888764 578998765 54432 2221 22333444 6677766654 478
Q ss_pred eEEEEECCCCcEEE----EEec-----------CCceEEEEEcCCe--EEEEE--CCeEEEEECCCCc-------ee---
Q 019349 76 RLCLFNTTTGTALR----ELNF-----------LTSILAVRLNKKR--LVIVL--REKTYIYDANTLA-------IL--- 126 (342)
Q Consensus 76 ~i~iwd~~~~~~~~----~~~~-----------~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~~~~-------~~--- 126 (342)
.|.+|++.....+. ...+ ...+.+++++|+. ++++. ++.|++|++.... +.
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 99999987543321 1121 1135779999875 44444 6799999987543 21
Q ss_pred --eEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce--eEEEe---cccCCeeEEEECCCCCEEEEEeC
Q 019349 127 --DTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--HCEID---AHQAPLAAIVLSSNGMYIATASE 199 (342)
Q Consensus 127 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~--~~~~~---~h~~~v~~i~~s~dg~~lat~s~ 199 (342)
...... .......++++|++.++++++. .++.|.+||+.+++. +..+. .+......++|+|||++|+++..
T Consensus 201 ~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 201 TPEAFKVA-PGSGPRHLIFNSDGKFAYLINE-IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEECC-TTCCEEEEEECTTSSEEEEEET-TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred cccceecC-CCCCCeEEEEcCCCCEEEEEcC-CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 122222 2234566788888888777664 579999999987653 23332 34455789999999999977766
Q ss_pred C--CcEEEEEEcC--CCe--eEEEeccCcCceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCC
Q 019349 200 Q--GTIIRVFLVS--EAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGF 258 (342)
Q Consensus 200 d--g~~irlwd~~--~~~--~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~ 258 (342)
+ ++ |++|++. +++ .+..+.. ...+.+++|+||++ +|++++ .++.|.+|+++.
T Consensus 279 ~~~~~-i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~---~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 279 LKADG-VAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGK---YLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp SSSCE-EEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSC---EEEEEETTTTEEEEEEECT
T ss_pred CCCCE-EEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCC---EEEEEECCCCCEEEEEEEC
Confidence 5 55 6899995 454 3333432 23467899999999 888887 678999987653
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=5.4e-18 Score=147.01 Aligned_cols=213 Identities=9% Similarity=-0.026 Sum_probs=152.0
Q ss_pred EEEEeCCCCcEEE-EEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC-CcEEEEEecC--CceEEEEEcCC
Q 019349 30 FKIFDSSTGRLCY-ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-GTALRELNFL--TSILAVRLNKK 105 (342)
Q Consensus 30 ~~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~-~~~~~~~~~~--~~v~~i~~~~~ 105 (342)
+++||+.+++... ..+...+..+.+.++++.+++.+ ++.|.+||+.+ ++........ ..+.+++|+++
T Consensus 24 i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp EEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred EEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 7999999886653 33456788888988888887764 57999999998 8766555433 46788999887
Q ss_pred e--EEEEE---C--CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccC-CceeEEEec
Q 019349 106 R--LVIVL---R--EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVME-LHSHCEIDA 177 (342)
Q Consensus 106 ~--~~~~~---d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~-~~~~~~~~~ 177 (342)
. ++++. + ..|..+++.+++ ...+.... .+..+.++|++..+++.+. .++.++||++.. ......+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~---~~~~~~~spdg~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL---PSYWHGWSPDGKSFTYCGI-RDQVFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS---SEEEEEECTTSSEEEEEEE-ETTEEEEEEEETTTCCEEECCC
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC---CccceEECCCCCEEEEEEC-CCCceEEEEEECCCCcceEccc
Confidence 5 33344 1 255555655554 33332222 2566778888888875443 578899998642 234456677
Q ss_pred ccCCeeEEEECCCCCEEEEEeC-CCcEEEEEEcC-CCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC-------
Q 019349 178 HQAPLAAIVLSSNGMYIATASE-QGTIIRVFLVS-EATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS------- 248 (342)
Q Consensus 178 h~~~v~~i~~s~dg~~lat~s~-dg~~irlwd~~-~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d------- 248 (342)
|...+.+++|+|+|++|+.++. ++. +++|++. .+..+..+.. +...+.+++|+|+++ +|++++.+
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~---~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGD---KVVFVSYDADVFDHP 244 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCC--CSEEEEEEEECTTSS---EEEEEEEETTCCSCC
T ss_pred CCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEec--CCcccCCeEECCCCC---EEEEEEcCCCCCccc
Confidence 8889999999999998887764 776 5899986 4555566543 245688999999999 89888876
Q ss_pred ----CcEEEEecCCCCC
Q 019349 249 ----GSLHVFSPGFAIN 261 (342)
Q Consensus 249 ----g~i~vwd~~~~~~ 261 (342)
+.|++||++..+.
T Consensus 245 ~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SSEEEEEEEEETTSCSC
T ss_pred ccCceEEEEEecCCCCc
Confidence 5699999987543
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=1.3e-17 Score=170.54 Aligned_cols=233 Identities=12% Similarity=0.152 Sum_probs=168.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEeCC--CCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSS--TGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~~g-~~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
.+...+.+++|+++ ..++++..++ .+||.++ .+....-.....+....+.++++.+++.. ++.|.+||
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~--------~~~i~~~d 271 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK--------GGSIYIFN 271 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE--------TTEEEEEC
T ss_pred CCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe--------CCEEEEec
Confidence 45678899999998 5556666665 5888754 33222111122344457777888777763 57999999
Q ss_pred CCCCcEEEEEecC------------CceEEEEEc-CCe--EEEEECCeEEEEECCCCceeeEEeCCCCCc-eEEEEeeCC
Q 019349 82 TTTGTALRELNFL------------TSILAVRLN-KKR--LVIVLREKTYIYDANTLAILDTIDTVPNLK-GLCAFSPSL 145 (342)
Q Consensus 82 ~~~~~~~~~~~~~------------~~v~~i~~~-~~~--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~ 145 (342)
+...+ +..+... ..+.++.|+ |+. ++++.++.+++|++.+++... +. .+.. .+..++++
T Consensus 272 ~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~--~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VP--EPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CS--CCSCEEEEEECSS-
T ss_pred CCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-cc--CCCcceEEeeeEc-
Confidence 95443 3344321 258899999 875 555558899999998776442 22 2223 56778888
Q ss_pred CccEEEEeCCCCccEEE-EEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCc
Q 019349 146 NACFLAVPASTTKGSVL-VYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP 224 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~-iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~ 224 (342)
++..+++++ .++.+. +||+.+++.. .+..|...+.+++|||||++||+++.+++ +++||+.+++....+.. +.
T Consensus 347 dg~~l~~~s--~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~--~~ 420 (1045)
T 1k32_A 347 TKVAFIHGT--REGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERS--RE 420 (1045)
T ss_dssp SEEEEEEEE--TTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--SS
T ss_pred CCCeEEEEE--CCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccC--CC
Confidence 888898887 367888 9999877654 34478889999999999999999999987 58999999987665532 34
Q ss_pred eeEEEEEEecCCCcccEEEEEeCCC----------cEEEEecCCCC
Q 019349 225 STIFSLSFGQSMQFQDILVATSSSG----------SLHVFSPGFAI 260 (342)
Q Consensus 225 ~~v~~l~fs~d~~~~~~l~~~s~dg----------~i~vwd~~~~~ 260 (342)
..+.+++||||++ +|++++.++ +|++||+++++
T Consensus 421 ~~v~~~~~SpDG~---~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 421 AMITDFTISDNSR---FIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp SCCCCEEECTTSC---EEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCccceEECCCCC---eEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 4578899999999 898887654 89999998654
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=3.3e-16 Score=140.10 Aligned_cols=271 Identities=15% Similarity=0.072 Sum_probs=160.8
Q ss_pred CcEEEEeC--CCCcEEE---EEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE--EEEE-ecCCceEE
Q 019349 28 DGFKIFDS--STGRLCY---ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA--LREL-NFLTSILA 99 (342)
Q Consensus 28 ~g~~v~d~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~--~~~~-~~~~~v~~ 99 (342)
+++.+|++ .++++.. ..+......+.+.++++ +++++.. ..++.|.+||+.+++. +..+ .....+..
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~----~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE----DDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE----TTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec----CCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 45766654 5565433 12223444566667666 5444420 0268999999977653 3332 23457788
Q ss_pred EEEcCCe--EEEEE--CCeEEEEECCC-C--ceeeEEeCCCC-------CceEEEEeeCCCccEEEEeCCCCccEEEEEE
Q 019349 100 VRLNKKR--LVIVL--REKTYIYDANT-L--AILDTIDTVPN-------LKGLCAFSPSLNACFLAVPASTTKGSVLVYN 165 (342)
Q Consensus 100 i~~~~~~--~~~~~--d~~i~i~d~~~-~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd 165 (342)
++++++. ++++. ++.+.+|++.. + +.+..+..... ...+.+++++|++.++ +++. .++.|.+||
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~-v~~~-~~~~v~~~~ 168 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLA-VIDL-GSDKVYVYN 168 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEE-EEET-TTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEE-EEeC-CCCEEEEEE
Confidence 9998874 55555 57999999963 3 33333332211 1135567777888844 4443 578999999
Q ss_pred cc-CCcee--EEEecc-cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC--Cee--EEEeccCcC----ceeEEEEEEe
Q 019349 166 VM-ELHSH--CEIDAH-QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE--ATK--SYSFRRGTY----PSTIFSLSFG 233 (342)
Q Consensus 166 ~~-~~~~~--~~~~~h-~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~--~~~--~~~~~~~~~----~~~v~~l~fs 233 (342)
+. +++.. ..+..+ ...+..++|+|||++|++++..+..+++|++.. ++. +..+..... ...+..++|+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 98 45432 222332 336788999999997777654433468999874 543 222221111 1348889999
Q ss_pred cCCCcccEE-EEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeC-
Q 019349 234 QSMQFQDIL-VATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYN- 311 (342)
Q Consensus 234 ~d~~~~~~l-~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d- 311 (342)
||++ +| ++...+++|.+|+++...... .+..+.... ..| ..+.+.+++++|++++.+
T Consensus 249 pdG~---~l~v~~~~~~~v~v~~~~~~g~~~-------~~~~~~~~~----~~~-------~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 249 HDGH---FLYVSNRGYNTLAVFAVTADGHLT-------LIQQISTEG----DFP-------RDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp TTSC---EEEEEEETTTEEEEEEECGGGCEE-------EEEEEECSS----SCC-------CEEEECTTSSEEEEEETTT
T ss_pred CCCC---EEEEEeCCCCEEEEEEECCCCcEE-------EeEEEecCC----CCc-------CeEEECCCCCEEEEEEcCC
Confidence 9998 77 455668999999987421111 010000000 000 122334555788888875
Q ss_pred CcEEEEEEecCCCCe
Q 019349 312 GYFVEYIFSINNCCE 326 (342)
Q Consensus 312 g~v~~~~~~~~~~~~ 326 (342)
+.+.+|.++.+.+..
T Consensus 308 ~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 308 DNATLYARDLTSGKL 322 (347)
T ss_dssp TEEEEEEECTTTCCE
T ss_pred CcEEEEEEeCCCCeE
Confidence 899999998776653
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=1.2e-17 Score=148.82 Aligned_cols=215 Identities=8% Similarity=-0.007 Sum_probs=149.1
Q ss_pred CCCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCe--EEEEE--CCeEEEEECCCCceeeEEeCCCC----CceEEEEe
Q 019349 73 SPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPN----LKGLCAFS 142 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~--~~~~~--d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~ 142 (342)
.+++|.+||..+++.+..+..+. .+..++++++. ++++. ++.|++||+.+++.+..+..... ...+..++
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 38999999999999988888766 68889998875 44554 67999999999988877765432 11234556
Q ss_pred eCCCccEEEEeCCCC-----------ccEEEEEEccCCce---eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEE
Q 019349 143 PSLNACFLAVPASTT-----------KGSVLVYNVMELHS---HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFL 208 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~-----------~g~i~iwd~~~~~~---~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd 208 (342)
++|++.++++++. . ++.|.+||+.+++. +..+.. ...+.+++|+|||+ |+.++. . |++||
T Consensus 99 ~spdg~~l~~~~~-~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~-i~~~d 172 (349)
T 1jmx_B 99 ISPDGKEVYATVN-PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--D-IYKMD 172 (349)
T ss_dssp ECTTSSEEEEEEE-EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--S-EEEEC
T ss_pred ECCCCCEEEEEcc-cccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--c-EEEEe
Confidence 6788888887762 1 38999999988543 334443 34689999999999 555543 3 57999
Q ss_pred cCCCeeEEEeccCcC-----------------------------------------------------------------
Q 019349 209 VSEATKSYSFRRGTY----------------------------------------------------------------- 223 (342)
Q Consensus 209 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 223 (342)
+.+++.+..+..+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (349)
T 1jmx_B 173 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 252 (349)
T ss_dssp TTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc
Confidence 999987776643310
Q ss_pred -ceeEEEEEEec-CCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCcc
Q 019349 224 -PSTIFSLSFGQ-SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVK 301 (342)
Q Consensus 224 -~~~v~~l~fs~-d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (342)
...+.+++|+| |++ +|+++ ++.|++||+++.+..+... .. .......|+ ++
T Consensus 253 ~~~~~~~~~~sp~dg~---~l~~~--~~~v~~~d~~~~~~~~~~~------~~--~~~~~~~~s--------------~d 305 (349)
T 1jmx_B 253 LTELYFTGLRSPKDPN---QIYGV--LNRLAKYDLKQRKLIKAAN------LD--HTYYCVAFD--------------KK 305 (349)
T ss_dssp CSSCEEEEEECSSCTT---EEEEE--ESEEEEEETTTTEEEEEEE------CS--SCCCEEEEC--------------SS
T ss_pred CCCcceeeEecCCCCC---EEEEE--cCeEEEEECccCeEEEEEc------CC--CCccceEEC--------------CC
Confidence 00245678889 998 88877 8899999998765322100 00 001112333 34
Q ss_pred ccEEEEEEeCCcEEEEEEe
Q 019349 302 RASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 302 ~~~l~~~~~dg~v~~~~~~ 320 (342)
+++|++++.++.|++|++.
T Consensus 306 g~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 306 GDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp SSCEEEESBSSEEEEEETT
T ss_pred CCEEEEecCCCeEEEEecc
Confidence 4788888889999999754
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=5e-17 Score=166.15 Aligned_cols=229 Identities=14% Similarity=0.119 Sum_probs=174.0
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEee-------------CCEEEEEEc-CCCCeEEEEcCCCCCCCCC
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAV-------------GAFSIVEML-YSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~g~~~~~~d 74 (342)
.+...+|+|||++|+.+.+..+.+||+...++. .... ..+..+.+. +++..+++.+ +
T Consensus 246 ~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--------~ 316 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--------R 316 (1045)
T ss_dssp SSCEEEEEESSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--------T
T ss_pred CcceeeEcCCCCEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE--------c
Confidence 456789999999999888777899998655443 3222 135567787 8888887775 4
Q ss_pred CeEEEEECCCCcEEEEEecCC-ceEEEEEcCCeE--EEEE-CCeEE-EEECCCCceeeEEeCCCCCceEEEEeeCCCccE
Q 019349 75 RRLCLFNTTTGTALRELNFLT-SILAVRLNKKRL--VIVL-REKTY-IYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~-~v~~i~~~~~~~--~~~~-d~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
+.|.+|+..+++......+.. .+..+.|+ +.. +.+. ++.+. +|++.+++.. .+. .+...+..++++|++..
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~--~~~~~~~~~~~SpDG~~ 392 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFE--ENLGNVFAMGVDRNGKF 392 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECC--CCCCSEEEEEECTTSSE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-Eec--CCccceeeeEECCCCCE
Confidence 689999998887654333445 78889998 754 3334 45788 8898876543 332 23345677888899999
Q ss_pred EEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCC---------cEEEEEEcCCCeeEEEecc
Q 019349 150 LAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQG---------TIIRVFLVSEATKSYSFRR 220 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg---------~~irlwd~~~~~~~~~~~~ 220 (342)
|++++ .++.|++||+.+++....+..|...+.+++|||||++||+++.++ ..|++||+.+++ +..+..
T Consensus 393 la~~~--~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~ 469 (1045)
T 1k32_A 393 AVVAN--DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT 469 (1045)
T ss_dssp EEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC
T ss_pred EEEEC--CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC
Confidence 99887 578999999999988877778999999999999999999988754 246899999887 455543
Q ss_pred CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 221 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 221 ~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
+ ...+.+++|+||++ +|+.++.++...+|+...
T Consensus 470 ~--~~~~~~~~~spdG~---~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 470 E--NSHDYAPAFDADSK---NLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp S--SSBEEEEEECTTSC---EEEEEESCCCCCEECSSS
T ss_pred C--CcccCCceEcCCCC---EEEEEecccCCcCcchhc
Confidence 2 34578899999999 999999999999998653
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=3e-17 Score=148.33 Aligned_cols=248 Identities=12% Similarity=0.074 Sum_probs=157.7
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEeCC-CCcEEEEEe-e--CCEEEEEEcCCCCeE-EEEcC-CCCCCC------CCC
Q 019349 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSS-TGRLCYERA-V--GAFSIVEMLYSSSLL-AIVGA-GEQPSL------SPR 75 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g~~v~d~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~-~~~~~-g~~~~~------~d~ 75 (342)
..+..++|+|||++|++++.+.+.+|+++ ++++..... . +....+.+.++++.+ ++++. +.-..+ .++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 46789999999999988877788999987 776543211 1 211123344455532 22321 000000 268
Q ss_pred eEEEEECC-CCcEEEEEe-----cCCceEEEEEcCCe--EEEEE--CCeEEEEECC-CCcee--eEEeCCCCCceEEEEe
Q 019349 76 RLCLFNTT-TGTALRELN-----FLTSILAVRLNKKR--LVIVL--REKTYIYDAN-TLAIL--DTIDTVPNLKGLCAFS 142 (342)
Q Consensus 76 ~i~iwd~~-~~~~~~~~~-----~~~~v~~i~~~~~~--~~~~~--d~~i~i~d~~-~~~~~--~~~~~~~~~~~~~~~~ 142 (342)
++.+|++. +++....+. ....+.++.+++++ ++++. ++.|++|++. +++.. ..+....+......++
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 89999987 466544433 23578999999885 34443 5699999998 67543 3343222123466677
Q ss_pred eCCCccEEEEeCCCCccEEEEEEcc--CCcee---EEEe-------cccC------CeeEEE-ECCCCCEEEEEeCCCc-
Q 019349 143 PSLNACFLAVPASTTKGSVLVYNVM--ELHSH---CEID-------AHQA------PLAAIV-LSSNGMYIATASEQGT- 202 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~~g~i~iwd~~--~~~~~---~~~~-------~h~~------~v~~i~-~s~dg~~lat~s~dg~- 202 (342)
++|++.++++++. .++.|.+|++. +++.. ..+. +|.. .+..++ |+|||++|++++.+..
T Consensus 200 ~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 200 MHPTGNYLYALME-AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred ECCCCCEEEEEEC-CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 8888888877664 47899999875 45432 1222 1222 488999 9999999887765432
Q ss_pred ----EEEEEEcC-CCeeEEEec-cCcCceeEEEEEEec---CCCcccEEEEEeCC-CcEEEEecCCC
Q 019349 203 ----IIRVFLVS-EATKSYSFR-RGTYPSTIFSLSFGQ---SMQFQDILVATSSS-GSLHVFSPGFA 259 (342)
Q Consensus 203 ----~irlwd~~-~~~~~~~~~-~~~~~~~v~~l~fs~---d~~~~~~l~~~s~d-g~i~vwd~~~~ 259 (342)
.|++|++. +|+...... .......+..++|+| |++ +|++++.+ ++|+||+++..
T Consensus 279 ~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~---~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 279 ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE---WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT---EEEEECSSSCEEEEEEEETT
T ss_pred CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC---EEEEEEcCCCeEEEEEEchh
Confidence 36899996 666433110 111122356789999 898 89988865 89999998654
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=4.6e-16 Score=139.98 Aligned_cols=285 Identities=13% Similarity=0.080 Sum_probs=171.8
Q ss_pred EcCCCCEEEEEc-----CCcEEEEeC--CCCcEEEE--EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC-
Q 019349 15 FNQDNSGFALST-----KDGFKIFDS--STGRLCYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT- 84 (342)
Q Consensus 15 fs~d~~~la~g~-----~~g~~v~d~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~- 84 (342)
..++..++.+|+ +.++.+|.+ .++++... .+......+.+.++++.+++++.... .++.|.+|++..
T Consensus 9 ~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~ 85 (361)
T 3scy_A 9 TTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKE 85 (361)
T ss_dssp GGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS---TTCEEEEEEEETT
T ss_pred hCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC---CCCcEEEEEEeCC
Confidence 445555666763 345788755 55654322 23334445677778887777765100 147999998755
Q ss_pred -CcE--EEEEe-cCCceEEEEEcCCeEEEEE--CCeEEEEECCCCceee----EEeCCC-C-------CceEEEEeeCCC
Q 019349 85 -GTA--LRELN-FLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILD----TIDTVP-N-------LKGLCAFSPSLN 146 (342)
Q Consensus 85 -~~~--~~~~~-~~~~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~----~~~~~~-~-------~~~~~~~~~~~~ 146 (342)
++. +.... .......+++..+.++++. ++.+.+|++.....+. .+.... . .....+++++|+
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd 165 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD 165 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT
T ss_pred CCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC
Confidence 433 33333 2346777778666666666 6799999997543221 111110 0 112355777888
Q ss_pred ccEEEEeCCCCccEEEEEEccCCce------e------EE-EecccCCeeEEEECCCCCEEEEEeC-CCcEEEEEEcCCC
Q 019349 147 ACFLAVPASTTKGSVLVYNVMELHS------H------CE-IDAHQAPLAAIVLSSNGMYIATASE-QGTIIRVFLVSEA 212 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~~~~------~------~~-~~~h~~~v~~i~~s~dg~~lat~s~-dg~~irlwd~~~~ 212 (342)
+.++++++. .++.|.+|++..... + .. ...+...+..++|+|||++|++++. +++ |++||+.++
T Consensus 166 g~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~g 243 (361)
T 3scy_A 166 GKYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYADG 243 (361)
T ss_dssp SSEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEETT
T ss_pred CCEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecCC
Confidence 887776664 578999999875431 1 11 2234556789999999999888874 665 689999877
Q ss_pred ee--EEEeccCc-CceeEEEEEEecCCCcccEEEEEeCC--CcEEEEecCCCCCCCCCCCcccccccccccccccccccc
Q 019349 213 TK--SYSFRRGT-YPSTIFSLSFGQSMQFQDILVATSSS--GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPA 287 (342)
Q Consensus 213 ~~--~~~~~~~~-~~~~v~~l~fs~d~~~~~~l~~~s~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
+. +..+.... .......++|+||++ +|+++..+ ++|.+|+++...... ..+..+... ..|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~spdg~---~l~v~~~~~~~~i~v~~~~~~~g~~------~~~~~~~~g-----~~~- 308 (361)
T 3scy_A 244 MLDEIQTVAADTVNAQGSGDIHLSPDGK---YLYASNRLKADGVAIFKVDETNGTL------TKVGYQLTG-----IHP- 308 (361)
T ss_dssp EEEEEEEEESCSSCCCCEEEEEECTTSS---EEEEEECSSSCEEEEEEECTTTCCE------EEEEEEECS-----SCC-
T ss_pred ceEEeEEEecCCCCCCCcccEEECCCCC---EEEEECCCCCCEEEEEEEcCCCCcE------EEeeEecCC-----CCC-
Confidence 54 23232111 112367899999999 88776654 899999996321100 001000000 000
Q ss_pred ccceeeeccCCCccccEEEEEE-eCCcEEEEEEecCCCC
Q 019349 288 DHHVLRNAFPAGVKRASVSVIT-YNGYFVEYIFSINNCC 325 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~~~-~dg~v~~~~~~~~~~~ 325 (342)
..+.+.+++++|++++ .++.+.+|.++.+.+.
T Consensus 309 ------~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 309 ------RNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp ------CEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred ------ceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 0123344557888888 5799999999976654
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=8e-18 Score=155.72 Aligned_cols=170 Identities=12% Similarity=0.145 Sum_probs=119.4
Q ss_pred CeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEECCeEEEEECCCCc----------eeeEEe---CCCCCceEE
Q 019349 75 RRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVLREKTYIYDANTLA----------ILDTID---TVPNLKGLC 139 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~d~~i~i~d~~~~~----------~~~~~~---~~~~~~~~~ 139 (342)
+++++|+.... . ....+..+++++ ..++++..+.+++|+..... .+.... .......+.
T Consensus 23 ~~vri~~~~~~-----~-~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPEE-----L-PKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCSS-----C-CCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCccc-----c-CCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 46777764311 1 112355556654 34555555569998763210 011000 001223578
Q ss_pred EEeeCCCccEEEE---eCCCCccEEEEEEccCC--------ce---eEEEecccCCeeEEEECCC-CCEEEEEeCCCcEE
Q 019349 140 AFSPSLNACFLAV---PASTTKGSVLVYNVMEL--------HS---HCEIDAHQAPLAAIVLSSN-GMYIATASEQGTII 204 (342)
Q Consensus 140 ~~~~~~~~~~l~~---~~~~~~g~i~iwd~~~~--------~~---~~~~~~h~~~v~~i~~s~d-g~~lat~s~dg~~i 204 (342)
++++++++.+|++ +++ .|+.|+|||+.++ ++ +..+.+|..+|++++|+|+ +++||+++.||+ |
T Consensus 97 ~l~~spdg~~lav~~~sgs-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~-v 174 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSE-YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS-I 174 (434)
T ss_dssp EEEECTTSCEEEEEEEETT-TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC-E
T ss_pred EEEEcCCCCEEEEEEeccC-CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe-E
Confidence 8899999999984 343 6999999998754 22 3456679999999999998 899999999998 5
Q ss_pred EEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 205 RVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 205 rlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
++||+++++.+..... +...|.+++|+|+++ +|++|+.||+|++||++
T Consensus 175 ~iwD~~~~~~~~~~~~--~~~~v~~v~wspdg~---~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 175 AVLQVTETVKVCATLP--STVAVTSVCWSPKGK---QLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEESSSEEEEEEEC--GGGCEEEEEECTTSS---CEEEEETTSCEEEECTT
T ss_pred EEEEcCCCcceeeccC--CCCceeEEEEcCCCC---EEEEEcCCCcEEEEccC
Confidence 8999999876554432 345699999999999 99999999999999987
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=3.4e-15 Score=129.85 Aligned_cols=238 Identities=14% Similarity=0.161 Sum_probs=162.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEEee--------CCEEEEEEcCCCCeEEEEcCCCCCCCCCCe
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAV--------GAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (342)
+-..+.+++++++|+++++...+ .+.+||.+ ++....... .....+.+......+.++..+ .++.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~ 101 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQ 101 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCE
Confidence 33568999999999987776655 47999987 544433211 233444553333444444421 2679
Q ss_pred EEEEECCCCcEEEEEecC--CceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 77 LCLFNTTTGTALRELNFL--TSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 77 i~iwd~~~~~~~~~~~~~--~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
|.+|| .+++.+..+... ..+.+++++++. ++++. ++.|++||. +++.+..+...........++.++++.+++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 99999 667777766533 368899998875 44444 568999996 456666665433333466777788877666
Q ss_pred EeCCCCccEEEEEEccCCceeEEEecc--cCCeeEEEECCCCCEEEEEeCCC-cEEEEEEcCCCeeEEEeccCcCceeEE
Q 019349 152 VPASTTKGSVLVYNVMELHSHCEIDAH--QAPLAAIVLSSNGMYIATASEQG-TIIRVFLVSEATKSYSFRRGTYPSTIF 228 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~~~~~~~~~~h--~~~v~~i~~s~dg~~lat~s~dg-~~irlwd~~~~~~~~~~~~~~~~~~v~ 228 (342)
+.. .++.|++||. .++.+..+..+ ...+..|+++++|+++++...++ + |++||. +++.+..+..+.....+.
T Consensus 180 ~~~--~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~ 254 (286)
T 1q7f_A 180 SDN--RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISALESKVKHAQCF 254 (286)
T ss_dssp EEG--GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEEEESSCCSCEE
T ss_pred EEC--CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEEcccCCCCcce
Confidence 554 4789999997 45566666543 36789999999999988887775 6 589995 577777765433233478
Q ss_pred EEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 229 SLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+++|+|+++ ++++ +.+++|++|++....
T Consensus 255 ~i~~~~~g~---l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 255 DVALMDDGS---VVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEETTTE---EEEE-ETTTEEEEEECSCCC
T ss_pred eEEECCCCc---EEEE-CCCCeEEEEEccccc
Confidence 999999997 6666 679999999976543
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=1.8e-16 Score=143.74 Aligned_cols=234 Identities=12% Similarity=-0.048 Sum_probs=148.3
Q ss_pred EEEcCCCCEEEEEcC-Cc---EEEEeCCCCcEEEEEeeCC--EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 13 VSFNQDNSGFALSTK-DG---FKIFDSSTGRLCYERAVGA--FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 13 l~fs~d~~~la~g~~-~g---~~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
.+|||||++|+.+++ ++ +.+||+.+++.......+. .....+.++++.+++++. ++.|.+||+.+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCc
Confidence 789999999988776 66 6778988886543322222 112467788888888875 6799999999998
Q ss_pred EEEEEecCCc-eEEE--EEcCCeEEEEE-------------------------CCeEEEEECCCCceeeEEeCCCCCceE
Q 019349 87 ALRELNFLTS-ILAV--RLNKKRLVIVL-------------------------REKTYIYDANTLAILDTIDTVPNLKGL 138 (342)
Q Consensus 87 ~~~~~~~~~~-v~~i--~~~~~~~~~~~-------------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (342)
.......+.. +... .++++...++. +..|++||+.+++....... . ..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~--~~~ 190 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-N--QWL 190 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-S--SCE
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-C--ccc
Confidence 7766665543 3222 23565433331 25799999998865443322 2 235
Q ss_pred EEEeeCC-CccEEEEeCCCC----ccEEEEEEccCCceeEEEeccc--CCeeEEEECCCCCEEEEEeCC-Cc---EEEEE
Q 019349 139 CAFSPSL-NACFLAVPASTT----KGSVLVYNVMELHSHCEIDAHQ--APLAAIVLSSNGMYIATASEQ-GT---IIRVF 207 (342)
Q Consensus 139 ~~~~~~~-~~~~l~~~~~~~----~g~i~iwd~~~~~~~~~~~~h~--~~v~~i~~s~dg~~lat~s~d-g~---~irlw 207 (342)
..+.++| ++..|++..... ...|.++|+..++. ..+..+. ..+...+|||||+.|+..+.+ +. .|.+|
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSA 269 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEE
Confidence 5667778 888888765311 33688888766543 3444444 357889999999988765542 22 15799
Q ss_pred EcCCCee--EEEeccCcCc-eeEEEEEEecCCCcccEEEEE---------eCCCcEEEEecCCCC
Q 019349 208 LVSEATK--SYSFRRGTYP-STIFSLSFGQSMQFQDILVAT---------SSSGSLHVFSPGFAI 260 (342)
Q Consensus 208 d~~~~~~--~~~~~~~~~~-~~v~~l~fs~d~~~~~~l~~~---------s~dg~i~vwd~~~~~ 260 (342)
|+.+++. +..+....+. .....++|+||++ .|+.. ..+..|++||++++.
T Consensus 270 d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~---~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 270 DPETLENRQLTSMPACSHLMSNYDGSLMVGDGS---DAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp CTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC---CC------------CCCCEEEEEETTTTE
T ss_pred ecCCCceEEEEcCCCceeeeecCCCCeEccCCC---cceeEeeeccccccCCCCEEEEEeccCCc
Confidence 9998874 3333210000 0011237999998 77754 456689999998754
No 160
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=1.2e-16 Score=156.82 Aligned_cols=238 Identities=10% Similarity=-0.016 Sum_probs=159.9
Q ss_pred CeEEEEEcCCCCEEEEEcCC----------cEEEEeCCCCcEEEEEee-C---CEEEEEEcCCCCeEEEEcCCCCCCCCC
Q 019349 9 PVFFVSFNQDNSGFALSTKD----------GFKIFDSSTGRLCYERAV-G---AFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~----------g~~v~d~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (342)
.|.+++|||||++|++++++ .+.+||+.+++...-... . .+..+.+.++++.+++++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-------- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-------- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--------
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--------
Confidence 48999999999999988652 367999998865211111 1 2445677888888988863
Q ss_pred CeEEEEECCCCcEEEEEec-CCce------------------EEEEEcCCe--EEEEE-CC-------------------
Q 019349 75 RRLCLFNTTTGTALRELNF-LTSI------------------LAVRLNKKR--LVIVL-RE------------------- 113 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~-~~~v------------------~~i~~~~~~--~~~~~-d~------------------- 113 (342)
++|.+||+.+++....... ...+ .++.|+|+. ++.+. ++
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCC
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcc
Confidence 6899999998877654433 2222 789999885 33333 32
Q ss_pred ---------------eEEEEECCCCceeeEEeCCC----CCceEEEEeeCCCccEEEEeCC--CCccEEEEEEccCCcee
Q 019349 114 ---------------KTYIYDANTLAILDTIDTVP----NLKGLCAFSPSLNACFLAVPAS--TTKGSVLVYNVMELHSH 172 (342)
Q Consensus 114 ---------------~i~i~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~--~~~g~i~iwd~~~~~~~ 172 (342)
+|++||+.+++....+..+. +...+..++++||+.++++... ..+..|.+||+.+++..
T Consensus 214 ~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 214 KPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp EEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred eeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 79999998887555554321 1345677888899988865531 13578999999998877
Q ss_pred EEEec-ccCCee----EEEECCCCCEEEEE--eCCC----c-EEEEEE-cCCCee--EEEeccCcCceeEEE-EEEecCC
Q 019349 173 CEIDA-HQAPLA----AIVLSSNGMYIATA--SEQG----T-IIRVFL-VSEATK--SYSFRRGTYPSTIFS-LSFGQSM 236 (342)
Q Consensus 173 ~~~~~-h~~~v~----~i~~s~dg~~lat~--s~dg----~-~irlwd-~~~~~~--~~~~~~~~~~~~v~~-l~fs~d~ 236 (342)
..+.. |...+. .++|||||+.|+.. ..++ . -|.+|| ..+++. ...+..+ ...+.. ++|+||+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg 371 (723)
T 1xfd_A 294 KKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTT
T ss_pred EEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCC
Confidence 66554 344443 78999999987754 4555 2 235677 344431 3444322 223444 6999999
Q ss_pred CcccEEEEEeCC---CcEEEEecCCC
Q 019349 237 QFQDILVATSSS---GSLHVFSPGFA 259 (342)
Q Consensus 237 ~~~~~l~~~s~d---g~i~vwd~~~~ 259 (342)
+ +|+..+.+ ++++||+++..
T Consensus 372 ~---~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 372 N---KIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp T---EEEEEESSSCTTCCEEEEECSS
T ss_pred C---EEEEEEcCCCCcceEEEEEeCC
Confidence 9 88766555 78999998754
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=1.3e-16 Score=153.05 Aligned_cols=195 Identities=13% Similarity=0.058 Sum_probs=136.2
Q ss_pred CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC-CceEEEEEcCCeEEEEEC-----CeEEEEEC
Q 019349 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSILAVRLNKKRLVIVLR-----EKTYIYDA 120 (342)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~i~~~~~~~~~~~d-----~~i~i~d~ 120 (342)
..+..+.+.++++.+++++. .+++++||++.+++......++ ..+..+.|+|+.++...+ ....+|.+
T Consensus 22 ~~~~~~~~~~DG~~la~~s~------~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGF------SEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEE------ETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEE
T ss_pred cchheeecCCCCCeEEEEEc------cCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEE
Confidence 46777888899999998875 3789999999766654444444 478999999996555442 34455444
Q ss_pred CC--CceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe
Q 019349 121 NT--LAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS 198 (342)
Q Consensus 121 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s 198 (342)
.. ......+.. .......++++++++..++... ++.+.+||+.+++.......+ . .+++|||||++||+++
T Consensus 96 ~~~~~g~~~~l~~-~~~~~~~~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 96 NTSRPGEEQRLEA-VKPMRILSGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLG 168 (582)
T ss_dssp ETTSTTCCEECTT-SCSBEEEEEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEE
T ss_pred eccCCCccccccC-CCCceeeeeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEE
Confidence 22 211123322 2223456777777666665554 344559999988765544433 3 8899999999999888
Q ss_pred CC----CcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCC--cEEEEecCCCCC
Q 019349 199 EQ----GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG--SLHVFSPGFAIN 261 (342)
Q Consensus 199 ~d----g~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg--~i~vwd~~~~~~ 261 (342)
.| ++ |++||+.+++.. .+.. +...+.+++|||||+ +|+++..++ +|++||+++++.
T Consensus 169 ~~~~~~~~-i~~~d~~~g~~~-~l~~--~~~~~~~~~~SpDG~---~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 169 FFGGGRVS-LFTSNLSSGGLR-VFDS--GEGSFSSASISPGMK---VTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp EEETTEEE-EEEEETTTCCCE-EECC--SSCEEEEEEECTTSC---EEEEEECSSCEEEEEECTTTCCE
T ss_pred EcCCCCeE-EEEEcCCCCCce-Eeec--CCCccccceECCCCC---EEEEccCCCeeEEEEEcCCCCcE
Confidence 77 55 689999888764 4432 345689999999999 999888888 899999987654
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=4.2e-18 Score=167.30 Aligned_cols=243 Identities=9% Similarity=0.019 Sum_probs=159.2
Q ss_pred EEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEeeC-----CEEEEEEcCCCCeEEEEcCCCC--CCCCCCeEEEEECCC
Q 019349 12 FVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVG-----AFSIVEMLYSSSLLAIVGAGEQ--PSLSPRRLCLFNTTT 84 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~--~~~~d~~i~iwd~~~ 84 (342)
+++|+|||++++++.+..+++||+.+++.......+ .+..+.+.++++.+++.+.... ..+.+++|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 789999997776666556899999998765433321 2667788899999888764100 000157999999999
Q ss_pred CcEEEEEecCCceEEEEEcCCe--EEEEECCeEEEEECCCCceeeEEeCCCCCceE-----------------EEEeeCC
Q 019349 85 GTALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANTLAILDTIDTVPNLKGL-----------------CAFSPSL 145 (342)
Q Consensus 85 ~~~~~~~~~~~~v~~i~~~~~~--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 145 (342)
++.+........+..++|+|++ ++.+.++.|++|++.+++..+.. .......+ .+++++|
T Consensus 100 g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 100 GEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 8763222334568889999885 45555999999999887654321 11111111 3678889
Q ss_pred CccEEEEeCCCC--------------------------------ccEEEEEEccCCcee--------EEEecccCCeeEE
Q 019349 146 NACFLAVPASTT--------------------------------KGSVLVYNVMELHSH--------CEIDAHQAPLAAI 185 (342)
Q Consensus 146 ~~~~l~~~~~~~--------------------------------~g~i~iwd~~~~~~~--------~~~~~h~~~v~~i 185 (342)
|+..||+++.+. ...|++||+.+++.. ..+.+|...+..+
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 999999876311 128999999887642 1234688889999
Q ss_pred EECCCCCEEEEEeCCC---cEEEEEE----cCCCeeEEEec---cCcCceeEE-----EEEEecCCCcccEEEE--EeCC
Q 019349 186 VLSSNGMYIATASEQG---TIIRVFL----VSEATKSYSFR---RGTYPSTIF-----SLSFGQSMQFQDILVA--TSSS 248 (342)
Q Consensus 186 ~~s~dg~~lat~s~dg---~~irlwd----~~~~~~~~~~~---~~~~~~~v~-----~l~fs~d~~~~~~l~~--~s~d 248 (342)
+||||++++++....+ ..|.+|| +.+++....+. .+ +...+. .++|+||++ .|+. ...+
T Consensus 259 ~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~---~l~~~~~~~~ 334 (719)
T 1z68_A 259 TWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES-RTGWAGGFFVSTPVFSYDAI---SYYKIFSDKD 334 (719)
T ss_dssp EESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC-SSSCSSSSSCCCCEECTTSS---CEEEEEECTT
T ss_pred EEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc-CCceEccccCCccEECCCCC---eEEEEEEccC
Confidence 9999988777754322 1256899 77776433221 11 122344 689999998 5554 4455
Q ss_pred Cc--EEEEecCCC
Q 019349 249 GS--LHVFSPGFA 259 (342)
Q Consensus 249 g~--i~vwd~~~~ 259 (342)
|. |.+||+...
T Consensus 335 g~~~l~~~~~~~~ 347 (719)
T 1z68_A 335 GYKHIHYIKDTVE 347 (719)
T ss_dssp SCEEEEEESSCST
T ss_pred CceEEEEEECCCC
Confidence 64 566666544
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=1.3e-14 Score=129.09 Aligned_cols=239 Identities=8% Similarity=0.039 Sum_probs=165.8
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-------------------------cEEEEeCCCCcEEEEEee---CCEEEEEEcCCC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKD-------------------------GFKIFDSSTGRLCYERAV---GAFSIVEMLYSS 58 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~-------------------------g~~v~d~~~~~~~~~~~~---~~~~~~~~~~~~ 58 (342)
-..+.+++|+|+|+.+++...+ .+.+||..++++...... .....+.+..++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4579999999999988888766 479999998887654321 234456666666
Q ss_pred CeEEEEcCCCCCCCCCCeEEEEECCCCc-EEEEEec----------CCceEEEEEcC-C-eEEEEE---CCeEEEEECCC
Q 019349 59 SLLAIVGAGEQPSLSPRRLCLFNTTTGT-ALRELNF----------LTSILAVRLNK-K-RLVIVL---REKTYIYDANT 122 (342)
Q Consensus 59 ~~~~~~~~g~~~~~~d~~i~iwd~~~~~-~~~~~~~----------~~~v~~i~~~~-~-~~~~~~---d~~i~i~d~~~ 122 (342)
+.+ ++.. .++.|++||..... .+..+.. -....++++++ + .++++. ++.|++|+ .+
T Consensus 103 ~l~-v~d~------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 103 NYW-VTDV------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp CEE-EEET------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred CEE-EEEC------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 643 3333 37899999976442 4554421 12578999987 4 455554 35899999 56
Q ss_pred CceeeEEeCCCC--------CceEEEEeeCCC-ccEEEEeCCCCccEEEEEEccCCceeEEEe--cccCCeeEEEECCCC
Q 019349 123 LAILDTIDTVPN--------LKGLCAFSPSLN-ACFLAVPASTTKGSVLVYNVMELHSHCEID--AHQAPLAAIVLSSNG 191 (342)
Q Consensus 123 ~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~--~h~~~v~~i~~s~dg 191 (342)
++.+..+..... ......++.+++ +.++++.. .++.|++||..+++.+..+. .+...+.+++|+| |
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 777666632211 112456666776 55554444 57899999999888888774 4667889999999 4
Q ss_pred CEEEEEe-------CCCcEEEEEEcCCCeeEEEeccC-cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 192 MYIATAS-------EQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 192 ~~lat~s-------~dg~~irlwd~~~~~~~~~~~~~-~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
..+++.+ .+.+ |++||..+++.+..+... .....+.+|+|+|++. ++++...+++|++|+++...
T Consensus 252 ~~~~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~---lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT---VYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE---EEEEESSSCCEEEEEEEECS
T ss_pred EEEEeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC---EEEEECCCCEEEEEeCCccc
Confidence 4444433 3345 579999999998887421 1233478999999998 89999999999999987543
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=7.7e-15 Score=132.45 Aligned_cols=272 Identities=10% Similarity=0.058 Sum_probs=164.6
Q ss_pred EEEEcC---CcEEEEe--CCCCcEEEEEe---e--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC-CCcEEEE
Q 019349 22 FALSTK---DGFKIFD--SSTGRLCYERA---V--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT-TGTALRE 90 (342)
Q Consensus 22 la~g~~---~g~~v~d--~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~-~~~~~~~ 90 (342)
|++|+- +++.+|+ ..++++..... . .....+.+.++++.+++++. + .|.+||+. +++....
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~-------~-~v~~~~~~~~g~~~~~ 76 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-------K-KWSSFAVKSPTEIVHE 76 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-------T-EEEEEEEEETTEEEEE
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc-------c-eEEEEEECCCCCEEEe
Confidence 455542 3576654 56676543221 1 23445677777777766654 3 89999987 7766543
Q ss_pred Eec--CCceEEEEEcCCeE--EEE----------------ECCeEEEEECC-CCceeeEEeC--CCCCceEEEEeeCCCc
Q 019349 91 LNF--LTSILAVRLNKKRL--VIV----------------LREKTYIYDAN-TLAILDTIDT--VPNLKGLCAFSPSLNA 147 (342)
Q Consensus 91 ~~~--~~~v~~i~~~~~~~--~~~----------------~d~~i~i~d~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 147 (342)
... ...+..+.++++.. +++ .++.+.+|++. +++....+.. +........++++|++
T Consensus 77 ~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG 156 (365)
T 1jof_A 77 ASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE 156 (365)
T ss_dssp EEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS
T ss_pred eEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC
Confidence 332 23355577888754 331 25689999997 4655544432 1122346677788888
Q ss_pred cEEEEeCCCCccEEEEEEcc-CCcee--EEEe--cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcC--CCeeEE---E
Q 019349 148 CFLAVPASTTKGSVLVYNVM-ELHSH--CEID--AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVS--EATKSY---S 217 (342)
Q Consensus 148 ~~l~~~~~~~~g~i~iwd~~-~~~~~--~~~~--~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~--~~~~~~---~ 217 (342)
.+++++.. .++.|.+||+. +++.. ..+. .|...+..++|+|||++|+++++.+..+++|++. +|+... .
T Consensus 157 ~~l~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 235 (365)
T 1jof_A 157 TYLYSADL-TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHS 235 (365)
T ss_dssp SEEEEEET-TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred CEEEEEcC-CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccce
Confidence 88877654 46799999998 66543 3343 2466799999999999999888643346899765 565421 2
Q ss_pred ecc---CcCc-e-------eEEEEE-EecCCCcccEEEEEeCC-C-----cEEEEecCCCCCCCCCCCcccccccccccc
Q 019349 218 FRR---GTYP-S-------TIFSLS-FGQSMQFQDILVATSSS-G-----SLHVFSPGFAINQRRGGRTSSILGSILPES 279 (342)
Q Consensus 218 ~~~---~~~~-~-------~v~~l~-fs~d~~~~~~l~~~s~d-g-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 279 (342)
+.. +... . .+..++ |+||++ +|++++.+ + +|.+|+++...... . +....+..
T Consensus 236 ~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~---~l~v~~~~~~~~~~~~i~v~~~~~~g~~~------~-~~~~~~~~ 305 (365)
T 1jof_A 236 FPLIPPGIPDRDPETGKGLYRADVCALTFSGK---YMFASSRANKFELQGYIAGFKLRDCGSIE------K-QLFLSPTP 305 (365)
T ss_dssp EESSCTTCCCBCTTTSSBSEEEEEEEECTTSS---EEEEEEEESSTTSCCEEEEEEECTTSCEE------E-EEEEEECS
T ss_pred EEcCCCCcCCcccccccccccccEEEECCCCC---EEEEECCCCCCCCCCeEEEEEECCCCCEE------E-eeeeeecC
Confidence 211 1001 1 478899 999999 88776543 3 89999996311111 0 00000000
Q ss_pred ccccccccccceeeeccCCCc---cccEEEEEEeC-CcEEEEEEecC
Q 019349 280 VNEVLDPADHHVLRNAFPAGV---KRASVSVITYN-GYFVEYIFSIN 322 (342)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d-g~v~~~~~~~~ 322 (342)
-..+ ..+++.| ++++|++++.+ +.|.+|+++.+
T Consensus 306 ---~~~~-------~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 306 ---TSGG-------HSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---SCCT-------TCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---CCCc-------ccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 0000 0122233 45789888875 89999999875
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=3.8e-15 Score=135.08 Aligned_cols=283 Identities=11% Similarity=-0.015 Sum_probs=165.9
Q ss_pred eEEEEEcCCCCEEEEEcCC----cEEEEeCCCCcEEEEEeeC-CEE-EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 10 VFFVSFNQDNSGFALSTKD----GFKIFDSSTGRLCYERAVG-AFS-IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~~~----g~~v~d~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
+.+++|+|||++|+..... .+.+||+.+++...-.... ... ...+.++++.+++++. ++.|.+||+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN-------ELNLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET-------TTEEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc-------CCcEEEEECC
Confidence 6678999999998766543 3677898887653322211 111 1456778888888875 5689999999
Q ss_pred CCcEEEEEecCCc-eEE---E----------------EEcCCeEE--E------EECCeEEEEECCCCceeeEEeCCCCC
Q 019349 84 TGTALRELNFLTS-ILA---V----------------RLNKKRLV--I------VLREKTYIYDANTLAILDTIDTVPNL 135 (342)
Q Consensus 84 ~~~~~~~~~~~~~-v~~---i----------------~~~~~~~~--~------~~d~~i~i~d~~~~~~~~~~~~~~~~ 135 (342)
+++.......+.. ... + .++++... + ..+..|++||+.+++....... .
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~---~ 187 (396)
T 3c5m_A 111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD---T 187 (396)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE---S
T ss_pred CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC---C
Confidence 8886655543332 111 1 12222111 1 1134899999988765544422 2
Q ss_pred ceEEEEeeCC-CccEEEEeCCCCc----cEEEEEEccCCceeEEEecc--cCCeeEEEECCCCCEEEEEeCC-C---cEE
Q 019349 136 KGLCAFSPSL-NACFLAVPASTTK----GSVLVYNVMELHSHCEIDAH--QAPLAAIVLSSNGMYIATASEQ-G---TII 204 (342)
Q Consensus 136 ~~~~~~~~~~-~~~~l~~~~~~~~----g~i~iwd~~~~~~~~~~~~h--~~~v~~i~~s~dg~~lat~s~d-g---~~i 204 (342)
..+..+.++| ++..+++...... ..|.+||+..++.. .+..+ ...+..++|+|||++|+.++.+ + ..|
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 2345556667 6666666542122 46899998765433 33333 2358889999999988877654 1 125
Q ss_pred EEEEcCCCeeEEEeccCcCceeEEEEEEec-CCCcccEEEEEe----------------CCCcEEEEecCCCCCCCCCCC
Q 019349 205 RVFLVSEATKSYSFRRGTYPSTIFSLSFGQ-SMQFQDILVATS----------------SSGSLHVFSPGFAINQRRGGR 267 (342)
Q Consensus 205 rlwd~~~~~~~~~~~~~~~~~~v~~l~fs~-d~~~~~~l~~~s----------------~dg~i~vwd~~~~~~~~~~~~ 267 (342)
++||+.+++...... . +. .. ++|+| |++ +|+.++ .++.|++||++.+........
T Consensus 267 ~~~d~~~g~~~~l~~-~--~~-~~-~~~s~~dg~---~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 338 (396)
T 3c5m_A 267 YKANPETLENEEVMV-M--PP-CS-HLMSNFDGS---LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKH 338 (396)
T ss_dssp EEECTTTCCEEEEEE-C--CS-EE-EEEECSSSS---EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEEC
T ss_pred EEEECCCCCeEEeee-C--CC-CC-CCccCCCCc---eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCC
Confidence 799998886533221 1 11 23 89999 998 887765 346899999876543210000
Q ss_pred ccccccccccc----cccccccccccceeeeccCCCccccEEEEEEe-CCcEEEEEEecCCCCe
Q 019349 268 TSSILGSILPE----SVNEVLDPADHHVLRNAFPAGVKRASVSVITY-NGYFVEYIFSINNCCE 326 (342)
Q Consensus 268 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~v~~~~~~~~~~~~ 326 (342)
... .+.+... .....|+| +++.|+..+. +|...+|.++...+..
T Consensus 339 ~~~-~~~~~~~~~~~~~~~~~s~--------------dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 339 STS-WDVLDGDRQITHPHPSFTP--------------NDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CCC-CCCBTTBSSTTCCCCEECT--------------TSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CCc-cccccccccCCCCCceEcc--------------CCCeEEEEecCCCCceEEEEEEccccc
Confidence 000 0000000 01113333 4467777665 6788888888766553
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=5.1e-16 Score=153.15 Aligned_cols=247 Identities=11% Similarity=0.040 Sum_probs=158.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEeeCC-----EEE--EEEcCCCCeEEEEcCCCCC--CCCCCeEEE
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGA-----FSI--VEMLYSSSLLAIVGAGEQP--SLSPRRLCL 79 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~--~~~d~~i~i 79 (342)
...+++|+|||++|+++ ++.+++||+.+++.......+. +.. ..+.++++.+++.+..... .+..+.+.+
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 46689999999988887 6668999999987543322211 122 5678888888877641000 001256789
Q ss_pred EECCCCcEEEEEecCCceEEEEEcCCe--EEEEECCeEEEEECCCCceeeEEeCCCCCceE-----------------EE
Q 019349 80 FNTTTGTALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANTLAILDTIDTVPNLKGL-----------------CA 140 (342)
Q Consensus 80 wd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-----------------~~ 140 (342)
||+.+++......++..+....|+|++ ++.+.++.|++|++.+++..+ +........+ .+
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCcc
Confidence 999998865433345678999999975 444559999999998876432 2222221111 23
Q ss_pred EeeCCCccEEEEeCCC----------------------------------CccEEEEEEccC---Cc--eeEEEe-----
Q 019349 141 FSPSLNACFLAVPAST----------------------------------TKGSVLVYNVME---LH--SHCEID----- 176 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~----------------------------------~~g~i~iwd~~~---~~--~~~~~~----- 176 (342)
+.++||+..||+...+ ...+|.+||+.+ ++ ....+.
T Consensus 176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~ 255 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM 255 (740)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHH
T ss_pred eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccC
Confidence 6778899988876310 122688999988 73 223343
Q ss_pred -cccCCeeEEEECCCCCEEEEEeCCC---cEEEEEEcCCCe----eE--EEeccCcCcee-----EEEEEEecCCCcccE
Q 019349 177 -AHQAPLAAIVLSSNGMYIATASEQG---TIIRVFLVSEAT----KS--YSFRRGTYPST-----IFSLSFGQSMQFQDI 241 (342)
Q Consensus 177 -~h~~~v~~i~~s~dg~~lat~s~dg---~~irlwd~~~~~----~~--~~~~~~~~~~~-----v~~l~fs~d~~~~~~ 241 (342)
+|...+..++|||||+.++.....+ ..|++||+.+|+ +. ..+....+..- ....+|+|||+ .
T Consensus 256 ~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~---~ 332 (740)
T 4a5s_A 256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN---S 332 (740)
T ss_dssp HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS---E
T ss_pred CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC---E
Confidence 3778899999999999777654322 236899999886 11 11100111111 23678999998 7
Q ss_pred EE-EEeC-CC--cEEEEecCCCC
Q 019349 242 LV-ATSS-SG--SLHVFSPGFAI 260 (342)
Q Consensus 242 l~-~~s~-dg--~i~vwd~~~~~ 260 (342)
|+ ..+. +| .|++||++...
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTCSS
T ss_pred EEEEEEcCCCceEEEEEECCCCc
Confidence 76 6654 44 57788877554
No 167
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=7.5e-13 Score=117.70 Aligned_cols=213 Identities=9% Similarity=0.024 Sum_probs=150.0
Q ss_pred CcEEEEeCCCCcEEEEEe-------eCC-EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEE
Q 019349 28 DGFKIFDSSTGRLCYERA-------VGA-FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILA 99 (342)
Q Consensus 28 ~g~~v~d~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~ 99 (342)
.++.+||.++++...... .+. ...+. ...+.+.++.. .+++|.+||..+++.+.++........
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~--~~~~~lyv~~~------~~~~v~viD~~t~~~~~~i~~~~~p~~ 88 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMV--IRDGIGWIVVN------NSHVIFAIDINTFKEVGRITGFTSPRY 88 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEE--EETTEEEEEEG------GGTEEEEEETTTCCEEEEEECCSSEEE
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEE--EECCEEEEEEc------CCCEEEEEECcccEEEEEcCCCCCCcE
Confidence 458999999987654221 111 12222 24455555554 368999999999999998876667889
Q ss_pred EEEcC-CeEEEEE--CCeEEEEECCCCceeeEEeCCC------CCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc
Q 019349 100 VRLNK-KRLVIVL--REKTYIYDANTLAILDTIDTVP------NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (342)
Q Consensus 100 i~~~~-~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~ 170 (342)
+++++ ..++++. ++.|.+||..+++....+.... .+..+.. . ++..+++... .++.|.++|+.+++
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~---~-~~~lyv~~~~-~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ---Y-GKYVYVNCWS-YQNRILKIDTETDK 163 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE---E-TTEEEEEECT-TCCEEEEEETTTTE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE---E-CCEEEEEcCC-CCCEEEEEECCCCe
Confidence 99844 4555665 6799999999999888887655 4444433 2 2333333221 26899999999998
Q ss_pred eeEEEecccCCeeEEEECCCCCEEEEEeCC----------CcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCccc
Q 019349 171 SHCEIDAHQAPLAAIVLSSNGMYIATASEQ----------GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 240 (342)
Q Consensus 171 ~~~~~~~h~~~v~~i~~s~dg~~lat~s~d----------g~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~ 240 (342)
.+..+.... ....++++|+|++++++..+ +. +.++|..+++....+.... ......|+|+||++
T Consensus 164 ~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~--- 237 (328)
T 3dsm_A 164 VVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRD--- 237 (328)
T ss_dssp EEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECCT-TCCCEEEEECTTSC---
T ss_pred EEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecCC-CCCceeEEEecCCC---
Confidence 888776533 45789999999987777654 55 5799999998776664321 12478899999998
Q ss_pred EEEEEeCCCcEEEEecCCCCC
Q 019349 241 ILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 241 ~l~~~s~dg~i~vwd~~~~~~ 261 (342)
+|.++.. +|.+||+++.+.
T Consensus 238 ~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 238 TLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp EEEEESS--SEEEEETTCSSC
T ss_pred EEEEEcc--EEEEEECCCCce
Confidence 7877765 899999877653
No 168
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=9.3e-13 Score=117.08 Aligned_cols=232 Identities=9% Similarity=0.019 Sum_probs=159.8
Q ss_pred CeEEEEEcCCCCEEEEEcC-CcEEEEeCCCCcEEEEEee-CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 9 PVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~-~g~~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
....+.+.. ++..++... +.+.+||..+++++..... .....+.+..+. .+.+... .++.|.+||..+++
T Consensus 45 ~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~------~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 45 VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQI------WDYRIFIINPKTYE 116 (328)
T ss_dssp CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEB------SCSEEEEEETTTTE
T ss_pred cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEEC------CCCeEEEEECCCCe
Confidence 457788753 333344443 4579999999988665532 334444443444 4444432 27899999999999
Q ss_pred EEEEEecCC------ceEEEEEcCCeEEEEE---CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC
Q 019349 87 ALRELNFLT------SILAVRLNKKRLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (342)
Q Consensus 87 ~~~~~~~~~------~v~~i~~~~~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (342)
.+..+.... ....+++....++++. ++.|.++|+.+++.+..+.....+.. +..++++.+++++.. .
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~---i~~~~dG~l~v~~~~-~ 192 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTS---LVMDKYNKMWTITDG-G 192 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCC---CEECTTSEEEEEBCC-B
T ss_pred EEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccc---eEEcCCCCEEEEECC-C
Confidence 888887655 6667777777888875 57999999999998888876555433 344667776665542 1
Q ss_pred ---------ccEEEEEEccCCceeEEEecc-cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeE
Q 019349 158 ---------KGSVLVYNVMELHSHCEIDAH-QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTI 227 (342)
Q Consensus 158 ---------~g~i~iwd~~~~~~~~~~~~h-~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v 227 (342)
.+.|.++|..+++....+... ....+.++|+||+++|..+.. ++ .+||..+++..............
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v-~~~d~~t~~~~~~~~~~~~~~~p 269 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DI-WRMPVEADRVPVRPFLEFRDTKY 269 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SE-EEEETTCSSCCSSCSBCCCSSCE
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EE-EEEECCCCceeeeeeecCCCCce
Confidence 278999999999877776543 236899999999999988765 54 69999888753211001012347
Q ss_pred EEEEEecCCCcccEEEEE----eCCCcEEEEecC
Q 019349 228 FSLSFGQSMQFQDILVAT----SSSGSLHVFSPG 257 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~----s~dg~i~vwd~~ 257 (342)
..++++|++. .++++. ..+++|.+||.+
T Consensus 270 ~gi~vdp~~g--~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 270 YGLTVNPNNG--EVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEECTTTC--CEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEEcCCCC--eEEEEcccccccCCEEEEECCC
Confidence 8899999544 166666 678999999987
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.61 E-value=4.1e-13 Score=119.71 Aligned_cols=228 Identities=12% Similarity=0.102 Sum_probs=146.9
Q ss_pred CeEEEEEcCCCCEEEEEcCC---c---EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCC-----------C
Q 019349 9 PVFFVSFNQDNSGFALSTKD---G---FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQP-----------S 71 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~---g---~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----------~ 71 (342)
.+.+++|||||++|+..+.+ + +.+|++.+++...-.....+..+.+.++++.+++.+..... .
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 46789999999999876542 2 56778888764432222226667788888888887631000 0
Q ss_pred ---------CCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEEE--C------C-eEEEEECCCCceeeEEeCCC
Q 019349 72 ---------LSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL--R------E-KTYIYDANTLAILDTIDTVP 133 (342)
Q Consensus 72 ---------~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~--d------~-~i~i~d~~~~~~~~~~~~~~ 133 (342)
.....|.+||+.+++.+..+..+ .+..+.|+++++++.. + . ...||.+.+++. ..+..+
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~- 216 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK- 216 (347)
T ss_dssp C---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-
T ss_pred eecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEeccC-
Confidence 01367999999988774444434 7888999999844333 2 1 334443334443 333322
Q ss_pred CCceEEEEeeCCCccEEEEeCCCC------ccEEEEEEccCCceeEEEecccCCeeE-EEECCCCCEEEEEeCCCcEEEE
Q 019349 134 NLKGLCAFSPSLNACFLAVPASTT------KGSVLVYNVMELHSHCEIDAHQAPLAA-IVLSSNGMYIATASEQGTIIRV 206 (342)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~~~~~------~g~i~iwd~~~~~~~~~~~~h~~~v~~-i~~s~dg~~lat~s~dg~~irl 206 (342)
.....+ +|++..|++.+... ...|.+|| +++.......|...+.. +.|+ || ++++++.++. ++|
T Consensus 217 --~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~-~~l 287 (347)
T 2gop_A 217 --VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS-VNL 287 (347)
T ss_dssp --ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE-EEE
T ss_pred --cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc-EEE
Confidence 223333 56777777665321 35788888 55554445567778886 9999 88 9999999987 589
Q ss_pred EEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcE-EEEecC
Q 019349 207 FLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL-HVFSPG 257 (342)
Q Consensus 207 wd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i-~vwd~~ 257 (342)
| +.+++....+ .+ ...|.+++|+| . ++++++.+++. .||.++
T Consensus 288 ~-~~~g~~~~~~-~~--~~~v~~~~~s~--~---~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 288 Y-IWDGEIKPIA-KG--RHWIMGFDVDE--I---VVYLKETATRLRELFTWD 330 (347)
T ss_dssp E-EESSSEEEEE-CS--SSEEEEEEESS--S---EEEEEECSSSCCEEEEES
T ss_pred E-EcCCceEEEe-cC--CCeEEeeeeeC--c---EEEEEcCCCChHHheEeC
Confidence 9 8766653333 22 45689999999 5 77777777765 788776
No 170
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.61 E-value=5.6e-14 Score=137.94 Aligned_cols=234 Identities=11% Similarity=0.052 Sum_probs=155.2
Q ss_pred CeEEEEEcCCCCEEEEEcC----------CcEEEEeCCCCcEE--EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCe
Q 019349 9 PVFFVSFNQDNSGFALSTK----------DGFKIFDSSTGRLC--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~----------~g~~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (342)
.|.+++|||||++|+.+++ ..+++||+++++.+ ... ...+..+.+.++++.++++. +++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~--------~~~ 131 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY--------QNN 131 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE--------TTE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE--------CCe
Confidence 4789999999999988765 34799999988752 111 24456678899999998875 579
Q ss_pred EEEEECCCCcEEEEEecC--Cce-----------------EEEEEcCCe--EEEEE-CC---------------------
Q 019349 77 LCLFNTTTGTALRELNFL--TSI-----------------LAVRLNKKR--LVIVL-RE--------------------- 113 (342)
Q Consensus 77 i~iwd~~~~~~~~~~~~~--~~v-----------------~~i~~~~~~--~~~~~-d~--------------------- 113 (342)
|++||+.+++........ ..| .++.|+|++ ++.+. ++
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 999999888765322111 112 479999885 33333 31
Q ss_pred -------------eEEEEECCCCcee--eEEeC----CCCCceEEEEeeCCCccEEEEeC--CCCccEEEEEE----ccC
Q 019349 114 -------------KTYIYDANTLAIL--DTIDT----VPNLKGLCAFSPSLNACFLAVPA--STTKGSVLVYN----VME 168 (342)
Q Consensus 114 -------------~i~i~d~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~l~~~~--~~~~g~i~iwd----~~~ 168 (342)
+|++||+.+++.. ..+.. ..+...+..++++||+.++++.. ......|.+|| +.+
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 7889999887643 12211 02334566778888877666532 11235688899 777
Q ss_pred CceeEEE----ecccCCee-----EEEECCCCCEEEE--EeCCCc-EEEEEEcCCCeeEEEeccCcCceeEEEEEEecCC
Q 019349 169 LHSHCEI----DAHQAPLA-----AIVLSSNGMYIAT--ASEQGT-IIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSM 236 (342)
Q Consensus 169 ~~~~~~~----~~h~~~v~-----~i~~s~dg~~lat--~s~dg~-~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~ 236 (342)
++....+ ..|...+. .++|+|||+.|+. +..+|. -|.+||+.+++ ...+..+ ...+..+.++ ++
T Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~--~~~v~~~~~~-d~ 367 (719)
T 1z68_A 292 WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSG--KWEAINIFRV-TQ 367 (719)
T ss_dssp EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCS--SSCEEEEEEE-CS
T ss_pred CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccC--ceEEEEEEEE-eC
Confidence 7765555 46777777 8999999996654 445553 24577877665 3444322 3347777777 77
Q ss_pred CcccEEEEEeCC-----CcEEEEecCC
Q 019349 237 QFQDILVATSSS-----GSLHVFSPGF 258 (342)
Q Consensus 237 ~~~~~l~~~s~d-----g~i~vwd~~~ 258 (342)
+ .|+..+.+ +++++|.++.
T Consensus 368 ~---~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 368 D---SLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp S---EEEEEESCGGGCTTCBEEEEEEC
T ss_pred C---EEEEEEecCCCCCceEEEEEEeC
Confidence 7 66666654 8899998864
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=2.7e-12 Score=111.36 Aligned_cols=191 Identities=11% Similarity=0.141 Sum_probs=131.4
Q ss_pred EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC-------CceEEEEE-cCC-eEEEEE---CCeEE
Q 019349 49 FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-------TSILAVRL-NKK-RLVIVL---REKTY 116 (342)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~v~~i~~-~~~-~~~~~~---d~~i~ 116 (342)
...+.+..+.+.++ +.. .++.|.+||.. ++.+..+... ..+.++++ .++ .++++. ++.|+
T Consensus 32 p~~v~~~~~g~l~v-~~~------~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 32 PSGVAVNAQNDIIV-ADT------NNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp EEEEEECTTCCEEE-EEG------GGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CceEEECCCCCEEE-EEC------CCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 34455555555333 322 36899999986 6666665421 36788998 344 556665 57999
Q ss_pred EEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEe--cccCCeeEEEECCCCCEE
Q 019349 117 IYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEID--AHQAPLAAIVLSSNGMYI 194 (342)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~--~h~~~v~~i~~s~dg~~l 194 (342)
+|| .+++.+..+... .......++.++++.++++.. .++.|.+||.. ++.+..+. .+...+..|+++++|+++
T Consensus 104 ~~d-~~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGAT-ILQHPRGVTVDNKGRIIVVEC--KVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp EEC-TTSCEEEEECTT-TCSCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred EEC-CCCcEEEEecCc-cCCCceEEEEeCCCCEEEEEC--CCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 999 667777666432 223456677777887666654 46899999954 55555554 455678999999999988
Q ss_pred EEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCC-cEEEEecC
Q 019349 195 ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG-SLHVFSPG 257 (342)
Q Consensus 195 at~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg-~i~vwd~~ 257 (342)
++.+.++. |++||. +++.+..+........+..|+++|++. ++++...++ .|++||.+
T Consensus 179 v~~~~~~~-i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~---l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 179 ISDNRAHC-VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE---ILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEGGGTE-EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC---EEEEECSSSCEEEEECTT
T ss_pred EEECCCCE-EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC---EEEEeCCCCEEEEEECCC
Confidence 88777776 589997 566666664321123578999999998 888887776 99999954
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.61 E-value=3.3e-13 Score=121.66 Aligned_cols=228 Identities=9% Similarity=0.074 Sum_probs=150.4
Q ss_pred EEEEcCCCCEEEEEcC-----------CcEEEEeCCCCcEEEEEeeC--------CEEEEEEcCCCCeEEEEcCCCCCCC
Q 019349 12 FVSFNQDNSGFALSTK-----------DGFKIFDSSTGRLCYERAVG--------AFSIVEMLYSSSLLAIVGAGEQPSL 72 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~-----------~g~~v~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~~~~ 72 (342)
.++|+|||++|+++.. +.+.+||+.+++.+...... ....+.+.++++++.+...+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----- 128 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----- 128 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-----
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-----
Confidence 8999999999988752 34799999988776554321 12235677778887776531
Q ss_pred CCCeEEEEECCCCcEEEE-EecCCceEEEEEcCC---eEEEEE-CCeEEEEECCC-CceeeEEe------CCCCCceEEE
Q 019349 73 SPRRLCLFNTTTGTALRE-LNFLTSILAVRLNKK---RLVIVL-REKTYIYDANT-LAILDTID------TVPNLKGLCA 140 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~-~~~~~~v~~i~~~~~---~~~~~~-d~~i~i~d~~~-~~~~~~~~------~~~~~~~~~~ 140 (342)
.+++|.+||+.+++.+.. +..... ..+.+.++ .++... |+++.+|++.. ++...... ....+. .
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~---~ 204 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI---F 204 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB---C
T ss_pred CCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce---E
Confidence 268999999999988877 655432 22344443 233333 88999999865 55442221 111111 1
Q ss_pred EeeCCCccEEEEeCCCCccEEEEEEccCCce--eEEEec------c----cCCeeEEEECCCCCEEEEEeC---------
Q 019349 141 FSPSLNACFLAVPASTTKGSVLVYNVMELHS--HCEIDA------H----QAPLAAIVLSSNGMYIATASE--------- 199 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~--~~~~~~------h----~~~v~~i~~s~dg~~lat~s~--------- 199 (342)
+...+++..+++.. .++.|.++|+..... ...+.. + ......++|+||++.+..+..
T Consensus 205 ~~~~~~g~~~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~ 282 (361)
T 2oiz_A 205 IAPALDKDKAHFVS--YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHK 282 (361)
T ss_dssp SCCEECSSEEEEEB--TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTT
T ss_pred EEecccCCEEEEEe--CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccccc
Confidence 11223344555555 468899999875432 222211 0 011223789999888877653
Q ss_pred --CCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 200 --QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 200 --dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.++ +.+||+.+++.+.++..+. +.+|+|+||++ +|++++. ++|.|||+++.
T Consensus 283 ~~~~~-v~viD~~t~~~v~~i~~~~----p~~ia~spdg~---~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 283 FPAAE-IWVMDTKTKQRVARIPGRD----ALSMTIDQQRN---LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp CCCSE-EEEEETTTTEEEEEEECTT----CCEEEEETTTT---EEEEECS-SCEEEEECSSS
T ss_pred CCCce-EEEEECCCCcEEEEEecCC----eeEEEECCCCC---EEEEeCC-CeEEEEECCCC
Confidence 234 5799999999999886542 78899999999 8998887 99999999887
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=1.4e-12 Score=115.88 Aligned_cols=223 Identities=6% Similarity=0.031 Sum_probs=144.1
Q ss_pred CeEEEEECCCCcEEEEEecC--CceEEEEEcCCeEEEEE---CCeEEEEECCCCc-eeeEEeC-------CCCCceEEEE
Q 019349 75 RRLCLFNTTTGTALRELNFL--TSILAVRLNKKRLVIVL---REKTYIYDANTLA-ILDTIDT-------VPNLKGLCAF 141 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~--~~v~~i~~~~~~~~~~~---d~~i~i~d~~~~~-~~~~~~~-------~~~~~~~~~~ 141 (342)
++|.+||..+++.+..+... ....+++++++..+.++ ++.|++||..... .+..+.. .........+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 58999999999887665432 36889999887644444 5799999985442 4555532 1122245667
Q ss_pred eeCC-CccEEEEeCCCCccEEEEEEccCCceeEEEec----------ccCCeeEEEECCC-CCEEEEEeCCCcEEEEEEc
Q 019349 142 SPSL-NACFLAVPASTTKGSVLVYNVMELHSHCEIDA----------HQAPLAAIVLSSN-GMYIATASEQGTIIRVFLV 209 (342)
Q Consensus 142 ~~~~-~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~----------h~~~v~~i~~s~d-g~~lat~s~dg~~irlwd~ 209 (342)
+.++ ++.++++.+. .++.|++|| .+++.+..+.. +-.....|+++|+ |+++++...+++ |++||.
T Consensus 149 a~~~~~g~lyv~d~~-~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~ 225 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGY-CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKT 225 (329)
T ss_dssp EECTTTCCEEEEECS-SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEET
T ss_pred EEeCCCCeEEEEeCC-CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEEC
Confidence 7777 6666666542 378999999 56677666642 2234899999998 677777767766 689999
Q ss_pred CCCeeEEEeccCcCceeEEEEEEecCCCcccEEEE-------EeCCCcEEEEecCCCCCCCCCCCccccccccccccccc
Q 019349 210 SEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA-------TSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNE 282 (342)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~-------~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (342)
.+|+.+..+........+.+++|+| +. .+++ .+.+++|++|++.+++.... ++. .+..
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~~~p-g~---~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~-------~~~-~~~~--- 290 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRNVFAISYIP-GF---LFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV-------FKP-VRKH--- 290 (329)
T ss_dssp TTCCEEEEECCTTTTTCEEEEEEET-TE---EEEEECCCCTTCSCCCCEEEEETTTCCEEEE-------ECC-SSSC---
T ss_pred CCCcEEEEEeccccCCCcceeeecC-CE---EEEeCCCEEeccCCCcEEEEEEcCCCeEEEE-------EcC-CCCc---
Confidence 9899888875443444588999999 33 3333 33445899999876643221 000 0000
Q ss_pred cccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecC
Q 019349 283 VLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 322 (342)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~ 322 (342)
...| ..+++.++++.+++...++.|++|+++..
T Consensus 291 ~~~p-------~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 291 FDMP-------HDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CSSE-------EEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred cCCe-------eEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 0011 12334555556666667999999988753
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=1.3e-13 Score=124.77 Aligned_cols=244 Identities=11% Similarity=0.026 Sum_probs=146.1
Q ss_pred CeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEEee--CCEEEEEE--cCCCCeEEEEcCC-C--CC----------
Q 019349 9 PVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAV--GAFSIVEM--LYSSSLLAIVGAG-E--QP---------- 70 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~g-~--~~---------- 70 (342)
.+..++|+|||+.|+.++.+ .+.+||+.+++....... +......+ ..+...++..... . .+
T Consensus 82 ~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 82 NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence 34467899999999888765 579999999865432222 22222222 3445554422100 0 00
Q ss_pred --CCCCCeEEEEECCCCcEEEEEecCCceEEEEEcC-CeEEE--EEC-------CeEEEEECCCCceeeEEeCCCCCceE
Q 019349 71 --SLSPRRLCLFNTTTGTALRELNFLTSILAVRLNK-KRLVI--VLR-------EKTYIYDANTLAILDTIDTVPNLKGL 138 (342)
Q Consensus 71 --~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~-~~~~~--~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (342)
...+..|.+||+.+++..........+..+.|+| +...+ +.. ..|+++|...++. ..+........+
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~ 240 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESC 240 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEE
T ss_pred hccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccc
Confidence 0135789999999998766556666789999999 76433 332 2788888765533 233222222345
Q ss_pred EEEeeCCCccEEEEeCCC---CccEEEEEEccCCcee--EEEecccCC---eeEEEECCCCCEEEEEe---------CCC
Q 019349 139 CAFSPSLNACFLAVPAST---TKGSVLVYNVMELHSH--CEIDAHQAP---LAAIVLSSNGMYIATAS---------EQG 201 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~---~~g~i~iwd~~~~~~~--~~~~~h~~~---v~~i~~s~dg~~lat~s---------~dg 201 (342)
....++|++..|++.+.. .++.|.+||+.+++.. ..+.++... ...++|+|||+.|+... .+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 566788888877664421 1235999999988743 333331110 22247999999888653 334
Q ss_pred cEEEEEEcCCCeeEEEeccCcC---------ceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCC
Q 019349 202 TIIRVFLVSEATKSYSFRRGTY---------PSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGF 258 (342)
Q Consensus 202 ~~irlwd~~~~~~~~~~~~~~~---------~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~ 258 (342)
. |.+||+.+++.. .+..+.. ...+.+++|+||++ +|+.++ .+|..+||.++-
T Consensus 321 ~-i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~---~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 321 F-LYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDK---QILFTSDVHGKPALYLATL 382 (388)
T ss_dssp E-EEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSS---EEEEEECTTSSCEEEEEEC
T ss_pred E-EEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCC---EEEEEecCCCceeEEEEEC
Confidence 4 689999887653 3332211 00367789999998 777665 477777776543
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.57 E-value=7.2e-13 Score=130.62 Aligned_cols=192 Identities=15% Similarity=0.065 Sum_probs=129.2
Q ss_pred EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCC------ceEEEEEcCCeE--EEEEC----------
Q 019349 51 IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT------SILAVRLNKKRL--VIVLR---------- 112 (342)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~------~v~~i~~~~~~~--~~~~d---------- 112 (342)
.+.+.+++.+++.. +++|++||+.++++...+..+. ...++.++|++. ++..+
T Consensus 21 ~~~w~~dg~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ---------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CEEECSSSEEEEEE---------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccEECCCCcEEEEc---------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 35666666544432 5799999999999876665432 223478888854 33333
Q ss_pred CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEE-EecccCCe---------
Q 019349 113 EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE-IDAHQAPL--------- 182 (342)
Q Consensus 113 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~-~~~h~~~v--------- 182 (342)
+.+++||+.+++... +.. .+..+...+++||+..||+.. ++.|.+||+.+++..+. ..++...+
T Consensus 92 ~~~~~~d~~~~~~~~-l~~--~~~~~~~~~~SPdG~~la~~~---~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EER--IPNNTQWVTWSPVGHKLAYVW---NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEEEEETTTTEECC-SSC--CCTTEEEEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred eEEEEEECCCCcEEE-ccc--CCCcceeeEECCCCCEEEEEE---CCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 567899999986543 222 233567778889999999885 58899999988765432 22332222
Q ss_pred --------eEEEECCCCCEEEEEeCCCc-----------------------------------EEEEEEcCC---Ce--e
Q 019349 183 --------AAIVLSSNGMYIATASEQGT-----------------------------------IIRVFLVSE---AT--K 214 (342)
Q Consensus 183 --------~~i~~s~dg~~lat~s~dg~-----------------------------------~irlwd~~~---~~--~ 214 (342)
..+.|||||++||.++.|.+ .+++||+.+ ++ .
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 35899999999999875433 357899988 73 2
Q ss_pred EEEeccC----cCceeEEEEEEecCCCcccEEEEEeC----CCcEEEEecCCCC
Q 019349 215 SYSFRRG----TYPSTIFSLSFGQSMQFQDILVATSS----SGSLHVFSPGFAI 260 (342)
Q Consensus 215 ~~~~~~~----~~~~~v~~l~fs~d~~~~~~l~~~s~----dg~i~vwd~~~~~ 260 (342)
..++... .+...+..++||||++ +++.... +..|++||+++++
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~---~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQER---ISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTE---EEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCe---EEEEEeCCCCCEEEEEEEECCCCc
Confidence 2334321 1344589999999998 7776643 3379999998765
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=4e-12 Score=110.15 Aligned_cols=177 Identities=13% Similarity=0.062 Sum_probs=137.1
Q ss_pred CCCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccE
Q 019349 73 SPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
.++.|.+||.++|+.+.++..+. .+.++.+.++..++++ ++.|+.||. +++.+.++..+.. ..+....+.+++..
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~-~~~~~~~~~~dG~~ 90 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAG-CEMQTARILPDGNA 90 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTT-CEEEEEEECTTSCE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC-ccccccEECCCCCE
Confidence 48999999999999999988764 6888889887655545 779999999 8999999876422 34566677888888
Q ss_pred EEEeCCCCccEEEEEEccCCceeEEEe------cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcC
Q 019349 150 LAVPASTTKGSVLVYNVMELHSHCEID------AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~~~~~~~~------~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
+++... .++.|..+|. +++.+..+. .+..+...+++.++|++|++.+.++++ ..||.. |+.+.++..+
T Consensus 91 lv~~~~-~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v-~~~d~~-G~~~w~~~~~-- 164 (276)
T 3no2_A 91 LVAWCG-HPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEV-REIAPN-GQLLNSVKLS-- 164 (276)
T ss_dssp EEEEES-TTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEE-EEECTT-SCEEEEEECS--
T ss_pred EEEecC-CCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEE-EEECCC-CCEEEEEECC--
Confidence 887652 2677888885 677666654 222356677889999999999999875 699997 9999988654
Q ss_pred ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 224 PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 224 ~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
....++.+.+++. ++++++.++.|..+|.++++.
T Consensus 165 -~~~~~~~~~~~g~---~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 165 -GTPFSSAFLDNGD---CLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp -SCCCEEEECTTSC---EEEECBTTSEEEEECTTTCCE
T ss_pred -CCccceeEcCCCC---EEEEeCCCCeEEEEeCcCCcE
Confidence 2355677889998 888888888999999886654
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.55 E-value=1.6e-12 Score=126.20 Aligned_cols=238 Identities=10% Similarity=-0.037 Sum_probs=151.2
Q ss_pred CCCCeEEEEEcCCCCEEEEE--cCCc-EEEEeCCCCcEEEEEeeC--CEE---------EEEEc--CCCCe-EEEEcCCC
Q 019349 6 SSYPVFFVSFNQDNSGFALS--TKDG-FKIFDSSTGRLCYERAVG--AFS---------IVEML--YSSSL-LAIVGAGE 68 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g--~~~g-~~v~d~~~~~~~~~~~~~--~~~---------~~~~~--~~~~~-~~~~~~g~ 68 (342)
+...|..++|++++-+++.+ ..++ .+||....+........+ .+. ...+. ++++. +++.+.
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-- 99 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-- 99 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT--
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC--
Confidence 45679999999887667766 4455 588885333222222222 111 22333 66777 777664
Q ss_pred CCCCCCCeEEEEECC--C-CcEEEEEec------CCceEEEEEcCCe--EEEEE-C----------CeEEEEECCC----
Q 019349 69 QPSLSPRRLCLFNTT--T-GTALRELNF------LTSILAVRLNKKR--LVIVL-R----------EKTYIYDANT---- 122 (342)
Q Consensus 69 ~~~~~d~~i~iwd~~--~-~~~~~~~~~------~~~v~~i~~~~~~--~~~~~-d----------~~i~i~d~~~---- 122 (342)
.+..|.+|++. . ++ ...+.. ...+.+++|++++ ++.+. + .+|++||+.+
T Consensus 100 ----~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 100 ----GDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp ----TTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred ----CCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 25677777775 3 44 333332 2367889999875 44444 4 4899999987
Q ss_pred --CceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC------ccEEEEEEcc-CC---ceeEEEecccCCeeEEEECCC
Q 019349 123 --LAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT------KGSVLVYNVM-EL---HSHCEIDAHQAPLAAIVLSSN 190 (342)
Q Consensus 123 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~g~i~iwd~~-~~---~~~~~~~~h~~~v~~i~~s~d 190 (342)
++. ..+. ..+......++++||+..|++.+.+. ...|.+||+. ++ +.......|...+..++|+||
T Consensus 175 ~~~~~-~~l~-~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 175 DRSAV-RELS-DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp CGGGS-EESS-CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred cCCce-eEEE-ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 443 3332 02223455667888999998776321 2589999998 56 444444556788999999999
Q ss_pred CCEEEEEeCCCcE-EEEEEcCCCeeEEEeccCcCce-------eEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 191 GMYIATASEQGTI-IRVFLVSEATKSYSFRRGTYPS-------TIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 191 g~~lat~s~dg~~-irlwd~~~~~~~~~~~~~~~~~-------~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
|+++++++.+|.. |.+||+.+++.. .+..+.... .+.+++|+|+++ ++++++. ++++||.++
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~---~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGL---IAVVHGK-GAAVLGILD 322 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSC---EEEEEBS-SSCEEEEEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCcee-ecccccccccCccccccCceEeEeCCCE---EEEEEEc-CccEEEEEE
Confidence 9988888888731 346666566543 332221110 045789999998 8999998 999999543
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.54 E-value=5.8e-12 Score=111.64 Aligned_cols=236 Identities=11% Similarity=0.057 Sum_probs=149.0
Q ss_pred CCCeEEEEEcCCCCEEEEE-cCCcEEEEeCCCCcEEEEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 7 SYPVFFVSFNQDNSGFALS-TKDGFKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g-~~~g~~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
...|.+++|++++..++.. ++..++.|. ++...... ......+.+..+.+ +++++. .++.|.+||..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~------~~~~i~~~d~~ 74 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQ-LFLLDV------FEGNIFKINPE 74 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSC-EEEEET------TTCEEEEECTT
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCC-EEEEEC------CCCEEEEEeCC
Confidence 3568899999998876654 444578883 33322222 23344555655555 443433 36899999998
Q ss_pred CCcEEEEE-ecCCceEEEEEcCCe-EEEEE-C-----CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCC
Q 019349 84 TGTALREL-NFLTSILAVRLNKKR-LVIVL-R-----EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (342)
Q Consensus 84 ~~~~~~~~-~~~~~v~~i~~~~~~-~~~~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 155 (342)
+++..... .....+.+++++++. ++++. . +.|++||..+++....+........+..+..++++.++++...
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 88765544 344679999998775 45554 2 4899999987765433332222234667777888877765541
Q ss_pred C----CccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEE-eCCCcEEEEEEcCC-CeeEEEec-----cCcCc
Q 019349 156 T----TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATA-SEQGTIIRVFLVSE-ATKSYSFR-----RGTYP 224 (342)
Q Consensus 156 ~----~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~-s~dg~~irlwd~~~-~~~~~~~~-----~~~~~ 224 (342)
. ..+.|..+|..+++.. .+..+...++.++|+|||+.|+.+ +.++. |.+||+.+ ++.+..+. .....
T Consensus 155 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~ 232 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDFRTVT-PIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFTGH 232 (333)
T ss_dssp CBTTBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECCSS
T ss_pred ccccCCCceEEEEeCCCCEEE-EeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecCCC
Confidence 0 1356777776654433 333344567899999999866554 44565 57999964 43332211 00011
Q ss_pred eeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 225 STIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 225 ~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
..+..+++++++. ++++...++.|.+||.+
T Consensus 233 ~~~~~i~~d~~G~---l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 233 EGPDSCCIDSDDN---LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEBTTCC---EEEEEETTTEEEEECTT
T ss_pred CCCCceEECCCCC---EEEEEcCCCEEEEECCC
Confidence 2478899999998 78888788999999974
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=2e-10 Score=99.61 Aligned_cols=232 Identities=4% Similarity=0.002 Sum_probs=151.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEc-CCcEEEEeCCCCcEEEEE-e--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALST-KDGFKIFDSSTGRLCYER-A--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~-~~g~~v~d~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
.....+.+++++++|+..++.. .+++.+||.. ++..... . ......+.+..+.... ++.. .++.|..|
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~------~~~~i~~~ 83 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVW-FTEN------AANKIGRI 83 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEE-EEET------TTTEEEEE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEE-EeCC------CCCeEEEE
Confidence 4456899999999999777665 3568999988 6544322 1 1334445554544443 3332 26789999
Q ss_pred ECCCCcEEEEEec---CCceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeC
Q 019349 81 NTTTGTALRELNF---LTSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 81 d~~~~~~~~~~~~---~~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 154 (342)
|.. ++ ...+.. ...+.+++++++. ++++. ++.|..||. +++.. .+...........++.++++.+.++..
T Consensus 84 ~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 84 TKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp CTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 976 43 333332 2368899998764 55555 568999998 55443 232222233456777777777666554
Q ss_pred CCCccEEEEEEccCCceeEE-EecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 155 STTKGSVLVYNVMELHSHCE-IDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~-~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
.++.|..||. +++.... +..+...+..++++++|++.++...++. |.+||. +++.. .+........+.+++++
T Consensus 160 --~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~ 233 (299)
T 2z2n_A 160 --QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEIT-EFKIPTPNARPHAITAG 233 (299)
T ss_dssp --TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEE-EEECSSTTCCEEEEEEC
T ss_pred --CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEE-EEECCCCCCCceeEEEC
Confidence 4688999998 6654432 3334566889999999997777666666 578998 66643 23222223458899999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecC
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+++. ++++...++.|.+||.+
T Consensus 234 ~~g~---l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 234 AGID---LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp STTC---EEEEETTTTEEEEEETT
T ss_pred CCCC---EEEeccCCceEEEECCC
Confidence 9998 77776678999999973
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=2.1e-11 Score=106.37 Aligned_cols=229 Identities=10% Similarity=-0.039 Sum_probs=147.3
Q ss_pred CCCeEEEEEcCCCC-EEEEEcCC-cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 7 SYPVFFVSFNQDNS-GFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 7 ~~~V~~l~fs~d~~-~la~g~~~-g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
..-..+++|+|+|+ .++++..+ ++..||.+++...+.........+.+..+++.++...+ ++.|.+||..+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~-------~~~i~~~d~~~ 99 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHG-------LRRLERQREPG 99 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETT-------TTEEEEECSTT
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecC-------CCeEEEEcCCC
Confidence 34567899999998 66677654 57999998872223333344556666666665443332 67999999988
Q ss_pred CcEEEEEec-----CCceEEEEEcCCeEEEEEC--------------------CeEEEEECCCCceeeEEeCCCCCceEE
Q 019349 85 GTALRELNF-----LTSILAVRLNKKRLVIVLR--------------------EKTYIYDANTLAILDTIDTVPNLKGLC 139 (342)
Q Consensus 85 ~~~~~~~~~-----~~~v~~i~~~~~~~~~~~d--------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (342)
++....... ...+.++++++++.+.++| +.|+.++.. ++. ..+... .....
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~--~~~~~ 175 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD--RVKPN 175 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC--CSSEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC--CCCCc
Confidence 875443321 1245678898887555531 255555554 433 333222 22345
Q ss_pred EEeeCCCccEEEEeCCCCccEEEEEEcc-CCce---eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeE
Q 019349 140 AFSPSLNACFLAVPASTTKGSVLVYNVM-ELHS---HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKS 215 (342)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~~g~i~iwd~~-~~~~---~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~ 215 (342)
.++++|++..+++.. .++.|.+||+. +++. ...+..+...+..|+++++|++.++. ++. |.+||.. ++.+
T Consensus 176 gi~~s~dg~~lv~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~-g~~~ 249 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD-GDEL 249 (296)
T ss_dssp EEEECTTSCEEEEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-SCEE
T ss_pred cEEECCCCCEEEEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-CCEE
Confidence 567778888884443 57899999986 4443 23333455667889999999977766 555 5799986 7777
Q ss_pred EEeccCcCceeEEEEEE-ecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 216 YSFRRGTYPSTIFSLSF-GQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 216 ~~~~~~~~~~~v~~l~f-s~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
..+..+ .. +.+++| +|+++ .|.+++.++ +.-++.++.
T Consensus 250 ~~~~~~--~~-~~~~~f~~~d~~---~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 250 GRVLTP--QT-TSNLCFGGPEGR---TLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEEECS--SC-CCEEEEESTTSC---EEEEEETTE-EEEEECSCC
T ss_pred EEEECC--CC-ceeEEEECCCCC---EEEEEcCCe-EEEEEcccc
Confidence 776533 22 788999 58888 888888763 444444433
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=1.1e-11 Score=121.69 Aligned_cols=244 Identities=7% Similarity=-0.005 Sum_probs=158.7
Q ss_pred CeEEEEEcCCCCEEEEEcC-C-----cEEEEeCCCCcEEEE-EeeCCEEEEEEcCCCCeEEEEcCCCCCC---------C
Q 019349 9 PVFFVSFNQDNSGFALSTK-D-----GFKIFDSSTGRLCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPS---------L 72 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~-~-----g~~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~ 72 (342)
.+..++|||||++||.+.+ + .+++||+.+++.... .....+..+.|.++++.+++.+....+. .
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 5789999999999986643 2 479999999976542 2222244567888888888876532100 1
Q ss_pred CCCeEEEEECCCCcE--EEEEec---CCceEEEEEcCCe--EEEEE------CCeEEEEECCC------Cc-eeeEEeCC
Q 019349 73 SPRRLCLFNTTTGTA--LRELNF---LTSILAVRLNKKR--LVIVL------REKTYIYDANT------LA-ILDTIDTV 132 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~--~~~~~~---~~~v~~i~~~~~~--~~~~~------d~~i~i~d~~~------~~-~~~~~~~~ 132 (342)
....|.+|++.+++. ...+.. +..+..+.+++++ +++.. +..|++||+.+ +. ....+..+
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 134599999988762 222222 2347788998875 33333 34899999976 43 34555444
Q ss_pred CCCceEEEEeeCCCccEEEEeCC-C-CccEEEEEEccCCc--eeEEEecccC--CeeEEEECCCCCEEEEEeCCCcE-EE
Q 019349 133 PNLKGLCAFSPSLNACFLAVPAS-T-TKGSVLVYNVMELH--SHCEIDAHQA--PLAAIVLSSNGMYIATASEQGTI-IR 205 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~~~-~-~~g~i~iwd~~~~~--~~~~~~~h~~--~v~~i~~s~dg~~lat~s~dg~~-ir 205 (342)
.... ...+++ ++..+++.+. + ..+.|.+||+.+++ ....+..|.. .+..++|++++.++++...|+.. |.
T Consensus 286 ~~~~-~~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 286 FEGE-YDYVTN--EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp SSSC-EEEEEE--ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred CCcE-EEEEec--cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 3322 223444 4445544432 1 24589999998764 2344555544 68889999888888999888853 45
Q ss_pred EEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE-eC---CCcEEEEecCCCC
Q 019349 206 VFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT-SS---SGSLHVFSPGFAI 260 (342)
Q Consensus 206 lwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~-s~---dg~i~vwd~~~~~ 260 (342)
+||+.+|+.+..+..+ ...+..++++|++. .|+.. +. .++|++||+.+++
T Consensus 363 ~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~---~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 363 LHDLATGALLKIFPLE--VGSVVGYSGQKKDT---EIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEETTTCCEEEEECCC--SSEEEEEECCTTCS---EEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEECCCCCEEEecCCC--CceEEEEecCCCCC---EEEEEEeCCCCCCEEEEEECCCCc
Confidence 6787778777776533 45688899999986 55533 32 4689999998765
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=1.3e-10 Score=110.55 Aligned_cols=233 Identities=15% Similarity=0.116 Sum_probs=156.8
Q ss_pred cCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeC-CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC--CCcEEEEE
Q 019349 16 NQDNSGFALSTKDG-FKIFDSSTGRLCYERAVG-AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALREL 91 (342)
Q Consensus 16 s~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~--~~~~~~~~ 91 (342)
++.+..+++..+++ +.++|..+++++.....+ ....+.+.++++++.+.+. ++.|.+||+. +++.+.++
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-------DGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCCEEEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-------CCeEEEEECCCCCCcEeEEE
Confidence 34444455555554 799999999887665543 3345677778888776653 7899999995 88888888
Q ss_pred ecCCceEEEEEc----CC--eEEEEE--CCeEEEEECCCCceeeEEeCCCC--------Cc-eEEEEeeCCCccEEEEeC
Q 019349 92 NFLTSILAVRLN----KK--RLVIVL--REKTYIYDANTLAILDTIDTVPN--------LK-GLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 92 ~~~~~v~~i~~~----~~--~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~l~~~~ 154 (342)
........+.++ ++ .++++. ++++.++|..+.+.++.+.+... +. .+.++..++++..+++.-
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 877778899998 35 355554 68999999999999988865321 11 334444445444444433
Q ss_pred CCCccEEEEEEccCCcee--EEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEecc-CcCceeEEEEE
Q 019349 155 STTKGSVLVYNVMELHSH--CEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR-GTYPSTIFSLS 231 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~--~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~-~~~~~~v~~l~ 231 (342)
. ..|.|.++|....+.+ ..+. .......+.|+|||++|+++......|.++|+.+++.+..+.. +..+.+-..+.
T Consensus 317 ~-~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~ 394 (567)
T 1qks_A 317 K-ETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN 394 (567)
T ss_dssp T-TTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred c-CCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee
Confidence 3 5799999998776432 2332 3345678899999999887775333467999999998877755 32222111222
Q ss_pred -EecCCCcccEEEEEe-CCCcEEEEecCCC
Q 019349 232 -FGQSMQFQDILVATS-SSGSLHVFSPGFA 259 (342)
Q Consensus 232 -fs~d~~~~~~l~~~s-~dg~i~vwd~~~~ 259 (342)
++|++. ..++++. .+++|.++|.+..
T Consensus 395 ~~~p~~g--~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 395 FVHPTFG--PVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp EEETTTE--EEEEEEBSSSSEEEEEECCTT
T ss_pred eECCCCC--cEEEeCCCCCCeEEEecCCCC
Confidence 588754 1444443 4689999998864
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=1.2e-10 Score=110.85 Aligned_cols=234 Identities=14% Similarity=0.109 Sum_probs=158.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEeCC--CCcEEEEEeeCC-EEEEEEc----CCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 8 YPVFFVSFNQDNSGFALSTKDG-FKIFDSS--TGRLCYERAVGA-FSIVEML----YSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~g-~~v~d~~--~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
..+..+.|+|||++|++++.++ +.+||+. +++.+.+...+. -..+.+. ++++++++... .+++|.+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~------~~~~v~V 270 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY------WPPQYVI 270 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE------ETTEEEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc------cCCeEEE
Confidence 4567999999999998887765 7999995 777766554433 2345565 36777766654 4799999
Q ss_pred EECCCCcEEEEEecC-----------C-ceEEEEEcCC--eEEEEE--CCeEEEEECCCCceee--EEeCCCCCceEEEE
Q 019349 80 FNTTTGTALRELNFL-----------T-SILAVRLNKK--RLVIVL--REKTYIYDANTLAILD--TIDTVPNLKGLCAF 141 (342)
Q Consensus 80 wd~~~~~~~~~~~~~-----------~-~v~~i~~~~~--~~~~~~--d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~ 141 (342)
+|..+.+.+..+... . .+..+..+++ .+++.. .++|.++|..+.+.+. .+... .....+
T Consensus 271 iD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~---~~~~d~ 347 (567)
T 1qks_A 271 MDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE---RFLHDG 347 (567)
T ss_dssp EETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC---SSEEEE
T ss_pred EECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc---ccccCc
Confidence 999999998877532 1 4667777654 333333 5799999998764332 33222 224455
Q ss_pred eeCCCccEEEEeCCCCccEEEEEEccCCceeEEEec-----ccC-CeeEEEECCCCC-EEEEEe-CCCcEEEEEEcCC--
Q 019349 142 SPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDA-----HQA-PLAAIVLSSNGM-YIATAS-EQGTIIRVFLVSE-- 211 (342)
Q Consensus 142 ~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~-----h~~-~v~~i~~s~dg~-~lat~s-~dg~~irlwd~~~-- 211 (342)
.+++++++++++.. .++.|.++|+.+++.+..+.. |.+ .++ + ++|++. ..+++. .+++ |.++|..+
T Consensus 348 ~~~pdgr~~~va~~-~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~~~-Vsvid~~~~~ 423 (567)
T 1qks_A 348 GLDGSHRYFITAAN-ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGDDS-VALIGTDPEG 423 (567)
T ss_dssp EECTTSCEEEEEEG-GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSE-EEEEECCTTT
T ss_pred eECCCCCEEEEEeC-CCCeEEEEECCCCcEEEEEeccCcCCCCcccee-e-ECCCCCcEEEeCCCCCCe-EEEecCCCCC
Confidence 67788888766654 578999999999988776654 332 222 2 588754 445553 3466 57999987
Q ss_pred -----CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeC-------CCcEEEEecCCC
Q 019349 212 -----ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS-------SGSLHVFSPGFA 259 (342)
Q Consensus 212 -----~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~-------dg~i~vwd~~~~ 259 (342)
.+.+.++.... .+ -..+.++|+++ +|.+... .++|.|||+++.
T Consensus 424 ~~~~~~kvv~~i~~~g-~g-~~~i~~~p~~~---~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 424 HPDNAWKILDSFPALG-GG-SLFIKTHPNSQ---YLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTTBTSEEEEEECSC-SC-CCCEECCTTCS---EEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CccccCEEEEEEecCC-CC-CEEEEeCCCCC---eEEEecCCCCCcccCceEEEEECCcc
Confidence 55666665321 21 23367899999 7877663 459999999876
No 184
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=2.1e-12 Score=116.39 Aligned_cols=214 Identities=12% Similarity=0.080 Sum_probs=135.5
Q ss_pred CeEEEEEcCCCCEEEEEc---CCcEEEEeCCCCcEEEE-EeeCCEEEEEEcCCC-CeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 9 PVFFVSFNQDNSGFALST---KDGFKIFDSSTGRLCYE-RAVGAFSIVEMLYSS-SLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~---~~g~~v~d~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
....++|+|||++|+++. ++.+.+||+.+++.+.. ...+....+.+.+.. ..++..+ .|+++.+|+..
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~-------~dg~~~~v~~~ 181 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC-------GDGGLLTINLG 181 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE-------TTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC-------CCCcEEEEEEC
Confidence 456789999999998875 24589999999987766 444443333344443 3333333 37889999886
Q ss_pred C-CcEEEEEe------cCCceEEE--EEcCCeEEEEE-CCeEEEEECCCCc--eeeEEeCCC--------CCce--EEEE
Q 019349 84 T-GTALRELN------FLTSILAV--RLNKKRLVIVL-REKTYIYDANTLA--ILDTIDTVP--------NLKG--LCAF 141 (342)
Q Consensus 84 ~-~~~~~~~~------~~~~v~~i--~~~~~~~~~~~-d~~i~i~d~~~~~--~~~~~~~~~--------~~~~--~~~~ 141 (342)
. ++...... .......+ ...+..+++.. +++++++|+...+ ....+.... .+.+ ..++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 5 55542221 11111111 12233444444 7799999997543 223332111 0111 2344
Q ss_pred eeCCCccEEEEeCC---------CCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 019349 142 SPSLNACFLAVPAS---------TTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 142 ~~~~~~~~l~~~~~---------~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~ 212 (342)
+ +++..+.++.. +..+.|.+||+.+++.+.++..+. +.+|+|+|||++|++++. ++ |.+||..++
T Consensus 262 ~--~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~-v~v~D~~t~ 335 (361)
T 2oiz_A 262 H--RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN-VNVYDISQP 335 (361)
T ss_dssp E--TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC-EEEEECSSS
T ss_pred e--cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce-EEEEECCCC
Confidence 4 44444443311 013589999999999999999887 899999999999999887 77 589999999
Q ss_pred --eeEEEeccCcCceeEEEEEEecCCC
Q 019349 213 --TKSYSFRRGTYPSTIFSLSFGQSMQ 237 (342)
Q Consensus 213 --~~~~~~~~~~~~~~v~~l~fs~d~~ 237 (342)
+.+.++... ......++|+|||.
T Consensus 336 ~l~~~~~i~~~--G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGA--AEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTS--CSSEEEEEECCCSC
T ss_pred cceeeEEeccC--CCCcEEEEecCCCC
Confidence 988886322 22357789999985
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.50 E-value=1.6e-11 Score=105.32 Aligned_cols=234 Identities=6% Similarity=-0.024 Sum_probs=146.1
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEeCCCCcEEEEEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 9 PVFFVSFNQDNSGFA-LSTK-DGFKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 9 ~V~~l~fs~d~~~la-~g~~-~g~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
...+++++++|+.++ +... .++.+||..+......... .....+.+..+++ +.++.. ++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-------~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-------NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET-------TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC-------CCEEEEEeCCC
Confidence 678999999999666 4243 4578898766543221111 2233344544445 333332 57899999876
Q ss_pred CcEEEEEecC--CceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCcc
Q 019349 85 GTALRELNFL--TSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (342)
Q Consensus 85 ~~~~~~~~~~--~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 159 (342)
+.. ..+... ..+.+++++++. ++++. ++.|.+|+..+...... ..........++.++++.++++.. .++
T Consensus 97 ~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~--~~~ 171 (270)
T 1rwi_B 97 NNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL--PFTGLNDPDGVAVDNSGNVYVTDT--DNN 171 (270)
T ss_dssp SCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC--CCCSCCSCCCEEECTTCCEEEEEG--GGT
T ss_pred ceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee--ccccCCCceeEEEeCCCCEEEEEC--CCC
Confidence 543 223222 468899998765 44444 56899997655433221 111111233455566666655544 468
Q ss_pred EEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcc
Q 019349 160 SVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQ 239 (342)
Q Consensus 160 ~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~ 239 (342)
.|.+||............+...+..|+++++|.++++...++.+ .+||....... ..... ....+.+++++|+++
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v-~~~~~~~~~~~-~~~~~-~~~~p~~i~~~~~g~-- 246 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQV-VKLLAGSTTST-VLPFT-GLNTPLAVAVDSDRT-- 246 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCE-EEECTTCSCCE-ECCCC-SCSCEEEEEECTTCC--
T ss_pred EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcE-EEEcCCCCcce-eeccC-CCCCceeEEECCCCC--
Confidence 89999987765443333344678999999999888877777774 79998655432 22211 123488999999998
Q ss_pred cEEEEEeCCCcEEEEecCCCCC
Q 019349 240 DILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 240 ~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
++++...+++|++|++...+.
T Consensus 247 -l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 247 -VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp -EEEEEGGGTEEEEECCCGGGS
T ss_pred -EEEEECCCCEEEEEcCCCccc
Confidence 889999999999999876654
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.48 E-value=2.9e-12 Score=124.50 Aligned_cols=242 Identities=13% Similarity=0.027 Sum_probs=142.6
Q ss_pred CCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC-CceE---------EEEEc--CC--e-EEEEEC--CeEEEEE
Q 019349 57 SSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSIL---------AVRLN--KK--R-LVIVLR--EKTYIYD 119 (342)
Q Consensus 57 ~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~---------~i~~~--~~--~-~~~~~d--~~i~i~d 119 (342)
+++.++++.... ..++...||....+.....+... ..+. ...++ |+ . ++.+.+ ..|++++
T Consensus 32 s~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~ 108 (662)
T 3azo_A 32 VGDEVWWVAPRP---AEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFE 108 (662)
T ss_dssp ETTEEEEEEEET---TTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEEC
T ss_pred cCCeEEEEecCc---ccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEc
Confidence 355555554310 03678889985444444444332 3444 45454 54 3 343433 4677777
Q ss_pred CC--C-CceeeEEeCCC---CCceEEEEeeCCCccEEEEeCCCCc----------cEEEEEEccC------CceeEEEe-
Q 019349 120 AN--T-LAILDTIDTVP---NLKGLCAFSPSLNACFLAVPASTTK----------GSVLVYNVME------LHSHCEID- 176 (342)
Q Consensus 120 ~~--~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~----------g~i~iwd~~~------~~~~~~~~- 176 (342)
+. . + ....+.... +......++++||+..|++... + ..|.+||+.+ ++. ..+.
T Consensus 109 ~~~~g~~-~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~ 184 (662)
T 3azo_A 109 PDAPGGA-VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAE--EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSD 184 (662)
T ss_dssp TTSTTCC-CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEE--EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSC
T ss_pred CCCCCCC-CCEeccCCccCCCCccccCcEECCCCCEEEEEEe--cccCCCCCCceeEEEEEECCCCccccCCce-eEEEe
Confidence 65 2 3 333443221 2345667888899999988763 3 5899999987 543 4555
Q ss_pred cccCCeeEEEECCCCCEEEEEeCCC-------cEEEEEEcC-CC--eeEEEeccCcCceeEEEEEEecCCCcccEEEEEe
Q 019349 177 AHQAPLAAIVLSSNGMYIATASEQG-------TIIRVFLVS-EA--TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 177 ~h~~~v~~i~~s~dg~~lat~s~dg-------~~irlwd~~-~~--~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
.+...+..++|||||++||.++.++ ..|++||+. +| .....+..+ +...+..++|+||++ ++++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~---l~~~~~ 260 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGS---LIVATD 260 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSC---EEEEEC
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCe---EEEEEC
Confidence 5667788999999999999888654 346899998 57 233333222 234588999999999 888888
Q ss_pred CCCc--EEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEecCC
Q 019349 247 SSGS--LHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINN 323 (342)
Q Consensus 247 ~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~~~ 323 (342)
.++. |.+||+++++...... .........|++... .+.+.+++..+++++. |.+++|.++...
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~--------~~~~~~~p~w~~~~~-----~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 261 RTGWWNLHRVDPATGAATQLCR--------REEEFAGPLWTPGMR-----WFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp TTSSCEEEEECTTTCCEEESSC--------CSSBSSCCCCSTTCC-----SEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred CCCCeEEEEEECCCCceeeccc--------ccccccCccccccCc-----eEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 8884 5555554332211000 000001123444221 1223344456666666 888888877643
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.48 E-value=2.1e-10 Score=101.47 Aligned_cols=230 Identities=10% Similarity=-0.007 Sum_probs=143.8
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~ 83 (342)
...+.+++|+|+|++++++..+ ++.+||.++++..... ....+..+.+..+++.++....+. ...+.|.+||..
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~---~~~~~i~~~d~~ 120 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF---KSTGGIFAATEN 120 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS---SSCCEEEEECTT
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC---CCCceEEEEeCC
Confidence 3457899999999977777665 4899999888654332 234555666666665444332200 012689999998
Q ss_pred CCcEEEEEe---cCCceEEEEEcCCeEEEEE-C--------CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 84 TGTALRELN---FLTSILAVRLNKKRLVIVL-R--------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 84 ~~~~~~~~~---~~~~v~~i~~~~~~~~~~~-d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
+++....+. ....+.++.++++..+.++ . +.|+.+|..+++....... ......+++++++..+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLW 197 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEE
Confidence 877543332 2246889999887644443 2 3566666555443322211 11245567778877555
Q ss_pred EeCCCCccEEEEEEccC-CceeEE--------EecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc
Q 019349 152 VPASTTKGSVLVYNVME-LHSHCE--------IDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT 222 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~-~~~~~~--------~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~ 222 (342)
++.. .++.|.+||+.+ ++.+.. +.++ ..+..++++++|+++++...++.+ .+||. +++.+..+....
T Consensus 198 v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v-~~~d~-~g~~~~~~~~~~ 273 (333)
T 2dg1_A 198 VTET-TANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRV-LVFNK-RGYPIGQILIPG 273 (333)
T ss_dssp EEEG-GGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEE-EEECT-TSCEEEEEECTT
T ss_pred EEeC-CCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEE-EEECC-CCCEEEEEEcCC
Confidence 4443 468999999964 332221 1122 367889999999988888777774 79998 577666664321
Q ss_pred C----ceeEEEEEEecCCCcccEEEEEeCCC
Q 019349 223 Y----PSTIFSLSFGQSMQFQDILVATSSSG 249 (342)
Q Consensus 223 ~----~~~v~~l~fs~d~~~~~~l~~~s~dg 249 (342)
. ...+.+++|+||++ .|.+++.++
T Consensus 274 ~~~g~~~~~~~~~~~~dg~---~L~v~~~~g 301 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIPGTN---QLIICSNDI 301 (333)
T ss_dssp GGGTCSCBCCEEEECTTSC---EEEEEEECG
T ss_pred CccccccCcceEEECCCCC---EEEEEeCcc
Confidence 1 01478899999986 666665553
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.48 E-value=7.2e-12 Score=113.36 Aligned_cols=235 Identities=11% Similarity=-0.007 Sum_probs=140.5
Q ss_pred EEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEee-CCE-EE---E----------------EEcCCCCeEEEEcCCCC
Q 019349 12 FVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV-GAF-SI---V----------------EMLYSSSLLAIVGAGEQ 69 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~-~~~-~~---~----------------~~~~~~~~~~~~~~g~~ 69 (342)
.+.|+|||++|+.++.+. +.+||+.+++....... ... .. + .+.++++.+++....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-- 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY-- 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH--
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec--
Confidence 378999999998776654 89999988864332221 111 10 0 111122222221100
Q ss_pred CCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcC-Ce--EEEEEC-------CeEEEEECCCCceeeEEeCCCCCceEE
Q 019349 70 PSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNK-KR--LVIVLR-------EKTYIYDANTLAILDTIDTVPNLKGLC 139 (342)
Q Consensus 70 ~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~-~~--~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (342)
....+..|.+||+.+++..........+..+.|++ +. ++.+.+ ..|++||+..++.. .+..+.....+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~ 241 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCT 241 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEE
T ss_pred cCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCcccc
Confidence 00136789999999988766666666788999998 44 333442 36888998765422 222211123455
Q ss_pred EEeeCCCccEEEEeCCC---CccEEEEEEccCCceeEEEecccCCeeEEEECC-CCCEEEEEeC----------------
Q 019349 140 AFSPSLNACFLAVPAST---TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSS-NGMYIATASE---------------- 199 (342)
Q Consensus 140 ~~~~~~~~~~l~~~~~~---~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~-dg~~lat~s~---------------- 199 (342)
.+.++|++..|++.+.. ..+.|.+||+.+++....... . ... +.|+| ||++|++++.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 67788888877766421 125699999988765432221 1 233 88999 9999988652
Q ss_pred CCcEEEEEEcCCCeeEEEeccCcCce---------eEEEEEEecCCCcccEEEEEeC-CCcEEEEecC
Q 019349 200 QGTIIRVFLVSEATKSYSFRRGTYPS---------TIFSLSFGQSMQFQDILVATSS-SGSLHVFSPG 257 (342)
Q Consensus 200 dg~~irlwd~~~~~~~~~~~~~~~~~---------~v~~l~fs~d~~~~~~l~~~s~-dg~i~vwd~~ 257 (342)
++. |.+||+.+++.. .+..+...- .+..++|+||++ +|+.++. ++...||.++
T Consensus 319 ~~~-i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 319 DPF-LYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDD---GVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCE-EEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSS---EEEEEECTTSSCEEEEEE
T ss_pred CCc-EEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCC---eEEEEecCCCCceEEEEE
Confidence 244 679999887643 232221100 145678999998 7777665 5666666554
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=2.2e-10 Score=100.28 Aligned_cols=231 Identities=11% Similarity=0.046 Sum_probs=146.1
Q ss_pred CeEEEEEcCCCCEEEE--------EcCCcEEEEeCCCCcEEEEE------eeCCEEEEEEcCCCCeEEEEcCCCCCCCCC
Q 019349 9 PVFFVSFNQDNSGFAL--------STKDGFKIFDSSTGRLCYER------AVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~--------g~~~g~~v~d~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (342)
...+++|+++|..+++ ..+.++.+||..+++..... ....+..+.+..+...+.++.. .
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~ 91 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------R 91 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------T
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------C
Confidence 4579999999987777 34456899998887654321 1233444444444234444443 3
Q ss_pred CeEEEEECCCCcEEEE-EecC-----CceEEEEEcCCe-EEEEEC-----------------CeEEEEECCCCceeeEEe
Q 019349 75 RRLCLFNTTTGTALRE-LNFL-----TSILAVRLNKKR-LVIVLR-----------------EKTYIYDANTLAILDTID 130 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~-~~~~-----~~v~~i~~~~~~-~~~~~d-----------------~~i~i~d~~~~~~~~~~~ 130 (342)
+.|.+||.. ++.... .... ..+.+++++++. ++++.. +.|..|+.. ++......
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 479999988 665433 2211 247889998775 444442 356667655 44333222
Q ss_pred CCCCCceEEEEeeC----CCccEEEEeCCCCccEEEEEEcc-CCc-----eeEEEeccc-CCeeEEEECCCCCEEEEEeC
Q 019349 131 TVPNLKGLCAFSPS----LNACFLAVPASTTKGSVLVYNVM-ELH-----SHCEIDAHQ-APLAAIVLSSNGMYIATASE 199 (342)
Q Consensus 131 ~~~~~~~~~~~~~~----~~~~~l~~~~~~~~g~i~iwd~~-~~~-----~~~~~~~h~-~~v~~i~~s~dg~~lat~s~ 199 (342)
.... ...++.+ +++..+..+.. .++.|.+||.. +++ ....+..+. ..+..++++++|+++++...
T Consensus 170 ~~~~---~~~i~~~~~~d~dg~~l~v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 170 AFQF---PNGIAVRHMNDGRPYQLIVAET-PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EESS---EEEEEEEECTTSCEEEEEEEET-TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred CCCC---cceEEEecccCCCCCEEEEEEC-CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 1111 2334455 77755554443 46889999986 443 223334443 56789999999998888877
Q ss_pred CCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE-eCCCcEEEEecCC
Q 019349 200 QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGF 258 (342)
Q Consensus 200 dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~-s~dg~i~vwd~~~ 258 (342)
++.+ .+||..+++.+..+..+ ...+.+++|+|+++ +|.++ ..++.|..|+++.
T Consensus 246 ~~~i-~~~d~~~g~~~~~~~~~--~~~~~~i~~~~dg~---~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 246 SSHI-EVFGPDGGQPKMRIRCP--FEKPSNLHFKPQTK---TIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTEE-EEECTTCBSCSEEEECS--SSCEEEEEECTTSS---EEEEEETTTTEEEEEECSS
T ss_pred CCEE-EEEcCCCCcEeEEEeCC--CCCceeEEECCCCC---EEEEEeCCCCeEEEEeCCC
Confidence 7764 79999878766665432 24588999999997 66555 4568999999865
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.47 E-value=3.2e-11 Score=107.38 Aligned_cols=223 Identities=10% Similarity=0.047 Sum_probs=141.1
Q ss_pred CCeEEEEEcCCCCEEEEEc----------CCcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeE
Q 019349 8 YPVFFVSFNQDNSGFALST----------KDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~----------~~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i 77 (342)
..+...+| ||++++... ...+.+||+.+++...- ..+....+.++++.+++++...+ .....|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~--~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEE--KKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETT--TTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccC--CCcceE
Confidence 35778888 999887542 12267889888764322 44566788888998888764210 012358
Q ss_pred EEEECCCCcEEEEEecCCceEEEEEcCCe--EEEEE-C---------------------------CeEEEEECCCCceee
Q 019349 78 CLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-R---------------------------EKTYIYDANTLAILD 127 (342)
Q Consensus 78 ~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~-d---------------------------~~i~i~d~~~~~~~~ 127 (342)
.+||+.+++.......+. +..+.|+|+. ++++. + ..|++||+.+++.+.
T Consensus 88 ~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 88 WVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 889998887665555555 8899998774 44443 2 479999999887645
Q ss_pred EEeCCCCCceEEEEeeCCCccEEEEeCCCCc----c-EEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCC-
Q 019349 128 TIDTVPNLKGLCAFSPSLNACFLAVPASTTK----G-SVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQG- 201 (342)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----g-~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg- 201 (342)
.+.. . .+..++++|++ +++++..+.+ . ...||.+.+++ ...+..+ ..+..+ +|||++|+.++.++
T Consensus 167 ~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 167 EFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEK 237 (347)
T ss_dssp EEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSS
T ss_pred eecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEcccc
Confidence 5543 2 33455666778 5555532111 1 33444443444 3444445 555554 99999999888553
Q ss_pred ------cEEEEEEcCCCeeEEEeccCcCceeEEE-EEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 202 ------TIIRVFLVSEATKSYSFRRGTYPSTIFS-LSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 202 ------~~irlwd~~~~~~~~~~~~~~~~~~v~~-l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
.-|.+|| +++. ..+..+ +...+.. ++|+ |+ ++++++.++.++|| +.
T Consensus 238 ~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~~~~~~s-dg----~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 238 KYMSEHNKLYIYD--GKEV-MGILDE-VDRGVGQAKIKD-GK----VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp SCCCSSCEEEEEC--SSCE-EESSTT-CCSEEEEEEEET-TE----EEEEEEETTEEEEE-EE
T ss_pred CCccccceEEEEC--CCce-Eecccc-CCcccCCccEEc-Cc----EEEEEecCCcEEEE-Ec
Confidence 2245777 5543 333222 2345775 8998 65 68889999999999 87
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.46 E-value=7.4e-11 Score=102.12 Aligned_cols=223 Identities=7% Similarity=0.006 Sum_probs=157.3
Q ss_pred CCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeC---CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEe
Q 019349 17 QDNSGFALSTKDG-FKIFDSSTGRLCYERAVG---AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELN 92 (342)
Q Consensus 17 ~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~ 92 (342)
..++.|++++.++ +.+||.++++++.+...+ ....+.+.++++.++ +. ++.|..||. +|+.+.++.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~-------~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SY-------SKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--EC-------BSEEEEECT-TSCEEEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eC-------CCCEEEECC-CCCEEEEEc
Confidence 3457788888776 699999999988776543 345567777777666 32 578999999 899999988
Q ss_pred cC--CceEEEEEcCCeEEEEE--C--CeEEEEECCCCceeeEEeCCCCC----ceEEEEeeCCCccEEEEeCCCCccEEE
Q 019349 93 FL--TSILAVRLNKKRLVIVL--R--EKTYIYDANTLAILDTIDTVPNL----KGLCAFSPSLNACFLAVPASTTKGSVL 162 (342)
Q Consensus 93 ~~--~~v~~i~~~~~~~~~~~--d--~~i~i~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~g~i~ 162 (342)
.+ ..+.++.+.++..+++. + +.+..+|. +++.+.++...... .....+++.+++.++++.. .++.|.
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~--~~~~v~ 149 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF--ATSEVR 149 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET--TTTEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec--CCCEEE
Confidence 75 36778888777544433 3 35666664 67777776532210 1111234566777888766 589999
Q ss_pred EEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc----CceeEEEEEEecCCCc
Q 019349 163 VYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT----YPSTIFSLSFGQSMQF 238 (342)
Q Consensus 163 iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~----~~~~v~~l~fs~d~~~ 238 (342)
.||.. ++.+..+..+ ..+.++.+.++|+.+++++.++++ ..+|..+|+.+.++.... ....+..++..+++.
T Consensus 150 ~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v-~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~- 225 (276)
T 3no2_A 150 EIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCF-VQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG- 225 (276)
T ss_dssp EECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEE-EEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC-
T ss_pred EECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeE-EEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC-
Confidence 99988 9988888765 345677889999999998888775 699999999999886321 112378889999998
Q ss_pred ccEEEEEeCC--------CcEEEEecCC
Q 019349 239 QDILVATSSS--------GSLHVFSPGF 258 (342)
Q Consensus 239 ~~~l~~~s~d--------g~i~vwd~~~ 258 (342)
++++.+.. +..+++++..
T Consensus 226 --i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 226 --LYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp --EEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred --EEEEeccCccccccccCCceEEEECC
Confidence 77666421 2456777643
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=4e-10 Score=101.80 Aligned_cols=235 Identities=14% Similarity=0.028 Sum_probs=149.7
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEeCCCCcEEEEEeeC---------CEEEEEEcCCCCeEEEEcCCCCCC
Q 019349 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (342)
Q Consensus 12 ~l~fs~d~~~la~g~-----------~~g~~v~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (342)
.++|+|||++|+++. ++.+.+||..+.+.+.....+ .-..+.+.++++.+.+....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----
Confidence 899999999998875 345789999988766544322 12245677788888777541
Q ss_pred CCCCeEEEEECCCCcEEEE-EecCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeC-----CCCCceE-EEEee
Q 019349 72 LSPRRLCLFNTTTGTALRE-LNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDT-----VPNLKGL-CAFSP 143 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~~~~~-~~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~-----~~~~~~~-~~~~~ 143 (342)
.++.|.++| .+++.+.+ +..+..+.-....+..++... |+++.++|. +++....... ...+... ..+..
T Consensus 146 -~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 146 -AGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred -CCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 257899999 99998888 766554322222222333332 889999999 8776643321 1111101 11222
Q ss_pred CCCccEEEEeCCCCccEEEEEEccCCc--eeEEEecc----------cCCeeEEEECCCCCEEEEEeC----------CC
Q 019349 144 SLNACFLAVPASTTKGSVLVYNVMELH--SHCEIDAH----------QAPLAAIVLSSNGMYIATASE----------QG 201 (342)
Q Consensus 144 ~~~~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~h----------~~~v~~i~~s~dg~~lat~s~----------dg 201 (342)
. +..+++.. ..+.+.+.|+.... .+..+... ......++++||++.|..+.. .+
T Consensus 223 ~--~~~~~~~~--~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 223 K--SGRIVWPV--YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred c--CCEEEEEc--CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 2 22333333 35789999987553 22233211 122445889999998887654 23
Q ss_pred cEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCCCCCCC
Q 019349 202 TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAINQR 263 (342)
Q Consensus 202 ~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~~~~ 263 (342)
+ |.++|+.+++.+.++..+. ...+++|+||++ .+|+++. .+++|.|||+++.+..+
T Consensus 299 ~-V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~--~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 299 E-VTSVTGLVGQTSSQISLGH---DVDAISVAQDGG--PDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred e-EEEEECCCCEEEEEEECCC---CcCeEEECCCCC--eEEEEEcCCCCeEEEEECCCCCEEe
Confidence 4 5799999999988885442 468899999997 1455555 48999999999877543
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.43 E-value=6.1e-12 Score=123.15 Aligned_cols=243 Identities=9% Similarity=0.006 Sum_probs=149.6
Q ss_pred CCeEEEEEcCCCCEEEEE-----cCC-cEEEEeCCCCcEEEEEeeCCE--EEEEEcCCCCeEEEEcCCCCC------CCC
Q 019349 8 YPVFFVSFNQDNSGFALS-----TKD-GFKIFDSSTGRLCYERAVGAF--SIVEMLYSSSLLAIVGAGEQP------SLS 73 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g-----~~~-g~~v~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~------~~~ 73 (342)
..+.+++|||||++||.+ +++ .+++||+.+++.+........ ..+.|.++++.+++.+..... ...
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 468899999999999843 222 379999999876411111222 456788888888887652110 001
Q ss_pred CCeEEEEECCCCcE--EEEEec---CCceEEEEEcCCe--EEEEE-CC----eEEEEECCCCceeeEEeCCCCCceEEEE
Q 019349 74 PRRLCLFNTTTGTA--LRELNF---LTSILAVRLNKKR--LVIVL-RE----KTYIYDANTLAILDTIDTVPNLKGLCAF 141 (342)
Q Consensus 74 d~~i~iwd~~~~~~--~~~~~~---~~~v~~i~~~~~~--~~~~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 141 (342)
...|++|++.+++. ...+.. ...+.++.+++++ +++.. ++ .|++++..+++. ..+..+.... ...+
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~-~~~~ 278 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAK-YEVH 278 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCC-EEEE
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCce-EEEE
Confidence 23499999988762 222222 2367889999875 33333 44 677777655543 3333332221 2222
Q ss_pred eeCCCccEEEEeCCC-CccEEEEEEccCCce---eEEEecc-cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcC-CCeeE
Q 019349 142 SPSLNACFLAVPAST-TKGSVLVYNVMELHS---HCEIDAH-QAPLAAIVLSSNGMYIATASEQGTIIRVFLVS-EATKS 215 (342)
Q Consensus 142 ~~~~~~~~l~~~~~~-~~g~i~iwd~~~~~~---~~~~~~h-~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~-~~~~~ 215 (342)
.+ ++.+++....+ .++.|.+||+.+++. ...+..+ ...+..++++ ++.++++...|+. .+||.+. +++.+
T Consensus 279 ~~--~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 279 AW--KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVATLKGKPV 354 (695)
T ss_dssp EE--TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEETTCCEE
T ss_pred ec--CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCCCCee
Confidence 23 33344444311 358999999987653 3333333 4568889998 7788899998986 4788664 46555
Q ss_pred EEeccCcCceeEEEEEEecCCCcccEEEEEe----CCCcEEEEecCCCC
Q 019349 216 YSFRRGTYPSTIFSLSFGQSMQFQDILVATS----SSGSLHVFSPGFAI 260 (342)
Q Consensus 216 ~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s----~dg~i~vwd~~~~~ 260 (342)
..+... ....+..++++||+. .|+... ..++|++||+++++
T Consensus 355 ~~l~~~-~~~~v~~~~~s~d~~---~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 355 RTVQLP-GVGAASNLMGLEDLD---DAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EECCCS-SSSEECCCBSCTTCS---EEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEecCC-CCeEEEEeecCCCCC---EEEEEEcCCCCCCEEEEEECCCCc
Confidence 555322 244577889999987 566333 24689999997654
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=1.9e-10 Score=103.31 Aligned_cols=237 Identities=13% Similarity=0.033 Sum_probs=154.4
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEeCCCCcEEEEEeeC---------CEEEEEEcCCCCeEEEEcCCCCCC
Q 019349 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (342)
Q Consensus 12 ~l~fs~d~~~la~g~-----------~~g~~v~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (342)
.++++|||++|+++. ++.+.+||..+.+.+.....+ .-..+.+.++++.+.+....
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~---- 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS---- 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----
Confidence 399999999887765 345799999999877665432 12235667788877766531
Q ss_pred CCCCeEEEEECCCCcEEEEEecCCceEEEEE-cCCeEEEEE-CCeEEEEECCC-CceeeEEeCCCCCc--eE---EEEee
Q 019349 72 LSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLVIVL-REKTYIYDANT-LAILDTIDTVPNLK--GL---CAFSP 143 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~--~~---~~~~~ 143 (342)
.++.|.++|+.+++.+.++..+.. ..+.. ....++..+ |+++.+.++.+ ++..........+. .+ ..+.
T Consensus 158 -~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~- 234 (386)
T 3sjl_D 158 -PAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS- 234 (386)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE-
T ss_pred -CCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeE-
Confidence 268999999999999999977653 22222 233344444 89999999976 55432221111111 11 1222
Q ss_pred CCCccEEEEeCCCCccEEEEEEccCCc--eeEEEe---------c-ccCCeeEEEECCCCCEEEEEeCC---------Cc
Q 019349 144 SLNACFLAVPASTTKGSVLVYNVMELH--SHCEID---------A-HQAPLAAIVLSSNGMYIATASEQ---------GT 202 (342)
Q Consensus 144 ~~~~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~---------~-h~~~v~~i~~s~dg~~lat~s~d---------g~ 202 (342)
.+++.++. .. .+|+|.+.|+.+.. .+..+. + .......++++++++.|...-.+ +.
T Consensus 235 ~~dG~~~~-vs--~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 235 QKAGRLVW-PT--YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTTTEEEE-EB--TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred cCCCcEEE-Ee--CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 24554444 33 36899999997654 233332 0 12344567889999988886431 12
Q ss_pred EEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE-eCCCcEEEEecCCCCCCC
Q 019349 203 IIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGFAINQR 263 (342)
Q Consensus 203 ~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~-s~dg~i~vwd~~~~~~~~ 263 (342)
-|-+.|+.+++.+.++..+ ..+.+|+|+||++ ++|.++ ..+++|.++|..+.+..+
T Consensus 312 ~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~--~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKFEMG---HEIDSINVSQDEK--PLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEETTTCCEEEEEEEE---EEECEEEECSSSS--CEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEECCCCeEEEEEECC---CCcceEEECCCCC--eEEEEEcCCCCeEEEEECCCCcEEE
Confidence 3469999999999988644 3588999999985 256665 458999999998876543
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.39 E-value=2.5e-10 Score=111.97 Aligned_cols=205 Identities=5% Similarity=-0.065 Sum_probs=133.4
Q ss_pred EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe--EEEEE-CCe-----------
Q 019349 49 FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-REK----------- 114 (342)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~-d~~----------- 114 (342)
+....+.++++.+++..... .....+|++||+.+++.+........+.++.|+++. ++... ++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~--G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSAS--GSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEECTTSSEEEEEEEET--TCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEECCCCCEEEEEEcCC--CCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 45567888888888775310 012248999999999876533222236678998874 44444 333
Q ss_pred -----EEEEECCCCcee--eEEeCCCCCceEEEEeeCCCccEEEEeCCCC---ccEEEEEEccC------Cc-eeEEEec
Q 019349 115 -----TYIYDANTLAIL--DTIDTVPNLKGLCAFSPSLNACFLAVPASTT---KGSVLVYNVME------LH-SHCEIDA 177 (342)
Q Consensus 115 -----i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~g~i~iwd~~~------~~-~~~~~~~ 177 (342)
|++|++.+++.. ..+....++.....+.++|++.+|++..... +..|.+||+.+ +. ....+..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 999999887532 2223333344466778888998888764211 56899999986 43 4566777
Q ss_pred ccCCeeEEEECCCCCEEEEEeCCCc---EEEEEEcCCCe--eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCc--
Q 019349 178 HQAPLAAIVLSSNGMYIATASEQGT---IIRVFLVSEAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGS-- 250 (342)
Q Consensus 178 h~~~v~~i~~s~dg~~lat~s~dg~---~irlwd~~~~~--~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~-- 250 (342)
|...+.. .|+|+|+.|+..+.++. -|.+||+.+++ ....+..+.....+.+++|++++. ++++...++.
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---lv~~~~~~g~~~ 360 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF---LVLCYLHDVKNT 360 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE---EEEEEEETTEEE
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE---EEEEEEECCEEE
Confidence 7776665 48899998887776432 24689998764 123343332223588899997777 8888888885
Q ss_pred EEEEecCCC
Q 019349 251 LHVFSPGFA 259 (342)
Q Consensus 251 i~vwd~~~~ 259 (342)
|++|++.++
T Consensus 361 l~~~~~~~g 369 (710)
T 2xdw_A 361 LQLHDLATG 369 (710)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 555666444
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=4.4e-10 Score=110.72 Aligned_cols=241 Identities=10% Similarity=-0.014 Sum_probs=151.4
Q ss_pred CeEEEEEcCCCCEEEEEcCC------cEEEEeCCCCcEEEEEeeCCE--EEEEEcCCCCeEEEEcCCCCC-------CCC
Q 019349 9 PVFFVSFNQDNSGFALSTKD------GFKIFDSSTGRLCYERAVGAF--SIVEMLYSSSLLAIVGAGEQP-------SLS 73 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~------g~~v~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~-------~~~ 73 (342)
.+..++|||||++||.+.++ .+++||+++++.+.. ..... ..+.|.++ +.+++.+..... ...
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 57889999999999876543 379999999976543 11122 34567788 888877642110 001
Q ss_pred CCeEEEEECCCCcE--EEEEecC---CceEEEEEcCCe--EEEEE-CC-----eEEEEECCCC--ceeeEEeCCCCCceE
Q 019349 74 PRRLCLFNTTTGTA--LRELNFL---TSILAVRLNKKR--LVIVL-RE-----KTYIYDANTL--AILDTIDTVPNLKGL 138 (342)
Q Consensus 74 d~~i~iwd~~~~~~--~~~~~~~---~~v~~i~~~~~~--~~~~~-d~-----~i~i~d~~~~--~~~~~~~~~~~~~~~ 138 (342)
...|.+|++.+++. ...+..+ ..+..+.+++++ +++.. ++ .|++||+.++ +....+..+.... .
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~ 320 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ-W 320 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC-E
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce-E
Confidence 34699999987762 2233322 247889999986 33333 32 8999999876 3144554433322 2
Q ss_pred EEEeeCCCccEEEEeCCC--CccEEEEEEccCC--ceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcC-CCe
Q 019349 139 CAFSPSLNACFLAVPAST--TKGSVLVYNVMEL--HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVS-EAT 213 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~--~~g~i~iwd~~~~--~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~-~~~ 213 (342)
..+. +++..|++.+.. .++.|.+||+.++ +....+..+...+..++++ ++.++++...||. .+||.+. +++
T Consensus 321 ~~~~--~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~g~ 396 (741)
T 1yr2_A 321 DFVD--GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAFDLDGK 396 (741)
T ss_dssp EEEE--EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEEETTSC
T ss_pred EEEe--ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCCCC
Confidence 2233 344455544321 2567999999875 3344445566667788887 6678888888886 4677554 466
Q ss_pred eEEEeccCcCceeEEEEEEecCCCcccEEE-EEe---CCCcEEEEecCCCC
Q 019349 214 KSYSFRRGTYPSTIFSLSFGQSMQFQDILV-ATS---SSGSLHVFSPGFAI 260 (342)
Q Consensus 214 ~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~-~~s---~dg~i~vwd~~~~~ 260 (342)
.+..+... ....+..++++||+. .|+ +.+ ..++|++||+.+++
T Consensus 397 ~~~~l~~~-~~~~v~~~~~s~d~~---~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 397 PAGAVSLP-GIGSASGLSGRPGDR---HAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEECBCS-SSCEEEEEECCBTCS---CEEEEEEETTEEEEEEEEETTTTE
T ss_pred ceeeccCC-CCeEEEEeecCCCCC---EEEEEEcCCCCCCEEEEEECCCCc
Confidence 55655421 245688899999987 455 333 23689999997654
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.38 E-value=1e-09 Score=100.35 Aligned_cols=237 Identities=8% Similarity=0.031 Sum_probs=149.3
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 8 YPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
....+|+|+++++++++...+ .+++||.+++++...........+.+..+.+.++++... ....|.++|...+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~-----~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWE-----GTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSS-----TTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecC-----CCceEEEEEcCCCc
Confidence 467899999999976666654 479999988866544332222226677777776666542 12289999987665
Q ss_pred EEEEE----e-cCCceEEEEEcC-CeEEEEE--CCeEEEEECCCCceeeEEe---CCCC-CceEE-EEeeCCCccEEEEe
Q 019349 87 ALREL----N-FLTSILAVRLNK-KRLVIVL--REKTYIYDANTLAILDTID---TVPN-LKGLC-AFSPSLNACFLAVP 153 (342)
Q Consensus 87 ~~~~~----~-~~~~v~~i~~~~-~~~~~~~--d~~i~i~d~~~~~~~~~~~---~~~~-~~~~~-~~~~~~~~~~l~~~ 153 (342)
....+ . ....+.++++++ +..+.+. ++.|+.||..++... .+. .... ..... .++.+|++..|..+
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 54444 2 234677889988 4444445 468999999876532 220 1111 11101 45555632333334
Q ss_pred CCCCccEEEEEEccCCceeEEEeccc---------------CCeeEEEECCCCCEEEEEe-CCCcEEEEEEcCCCeeEEE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQ---------------APLAAIVLSSNGMYIATAS-EQGTIIRVFLVSEATKSYS 217 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~---------------~~v~~i~~s~dg~~lat~s-~dg~~irlwd~~~~~~~~~ 217 (342)
.. .++.|+.||.... +..+.++. .....|+++|+|+++++-+ .+++ |+.||+.+|+....
T Consensus 285 d~-~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 285 DQ-NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYVSTV 360 (409)
T ss_dssp ET-TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEEEEE
T ss_pred eC-CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEEEEE
Confidence 33 5789999987643 33333332 3478999999999777766 5665 68999888864322
Q ss_pred eccCc------------CceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 218 FRRGT------------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 218 ~~~~~------------~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
..... .-.....|++++++. ++++-..++.|+.++++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~---lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGG---YWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSE---EEEEESTTCEEEEEEEC
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCC---EEEEECCCCeEEEEEeC
Confidence 21100 012478999999987 88888888999988764
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.37 E-value=4.8e-10 Score=97.66 Aligned_cols=191 Identities=9% Similarity=0.020 Sum_probs=122.8
Q ss_pred EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEec-CCceEEEEEcCCeE-EEEE--CCeEEEEECCCCc
Q 019349 49 FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNF-LTSILAVRLNKKRL-VIVL--REKTYIYDANTLA 124 (342)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~~-~~~~--d~~i~i~d~~~~~ 124 (342)
...+.+..+++.+++++. .++.|..||..++ ...+.. ...+.+++++++.. +++. ++.|.+||..+++
T Consensus 30 ~eg~~~d~~g~~l~~~~~------~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDV------RQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEEGGGTEEEEEEG------GGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred ccCCeEeCCCCEEEEEeC------CCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 344566666774555554 3789999999887 444443 34689999988764 4444 4689999998876
Q ss_pred eeeEEeCCCC--CceEEEEeeCCCccEEEEeCC---------------CCccEEEEEEccCCceeEEEecccCCeeEEEE
Q 019349 125 ILDTIDTVPN--LKGLCAFSPSLNACFLAVPAS---------------TTKGSVLVYNVMELHSHCEIDAHQAPLAAIVL 187 (342)
Q Consensus 125 ~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~---------------~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~ 187 (342)
.......... ......++.++++.++++... ...+.|..+|.. ++ +..+..+....+.++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEE
Confidence 5433221111 112234566777877775320 012456666654 33 4445566677899999
Q ss_pred CCCCCEEEEEeCCCcEEEEEEcC-CCee---EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 188 SSNGMYIATASEQGTIIRVFLVS-EATK---SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 188 s~dg~~lat~s~dg~~irlwd~~-~~~~---~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+|||+.|++.+.+++ |++||+. +|+. ...+ . .....+.+|++++++. ++++. ++.|.+||.+
T Consensus 180 s~dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~-~-~~~~~p~~i~~d~~G~---l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNA-THRYCLNARGETEYQGVHF-T-VEPGKTDGLRVDAGGL---IWASA--GDGVHVLTPD 245 (296)
T ss_dssp CTTSCEEEEETTTTE-EEEEEECSSSCEEEEEEEE-C-CSSSCCCSEEEBTTSC---EEEEE--TTEEEEECTT
T ss_pred CCCCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEe-e-CCCCCCCeEEECCCCC---EEEEc--CCeEEEECCC
Confidence 999999977777776 5799997 5554 2333 2 1233467899999998 66555 7899999975
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.35 E-value=2.2e-08 Score=86.60 Aligned_cols=232 Identities=9% Similarity=0.025 Sum_probs=149.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CcEEEEeCCCCcEEEE-Eee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 5 SSSYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLCYE-RAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 5 ~~~~~V~~l~fs~d~~~la~g~~-~g~~v~d~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
.....+.+++++++|+..++... +++.+||.. ++.... ... .....+.+..+.+.. ++.. .++.|..+
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~------~~~~v~~~ 88 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIW-FTEN------GANKIGKL 88 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEE-EEET------TTTEEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEE-EEec------CCCeEEEE
Confidence 34568899999999997776654 568999988 654432 111 234444454444433 3332 25789999
Q ss_pred ECCCCcEEEEEec---CCceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeC
Q 019349 81 NTTTGTALRELNF---LTSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 81 d~~~~~~~~~~~~---~~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 154 (342)
|.. ++. ..+.. ...+.++++.++. ++++. ++.|..||.. ++.. .+...........++.++++.+.++..
T Consensus 89 d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 89 SKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp CTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEec
Confidence 987 554 33333 2468889998654 55555 5689999987 5443 332222233456677777777655543
Q ss_pred CCCccEEEEEEccCCceeE-EEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEe
Q 019349 155 STTKGSVLVYNVMELHSHC-EIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 233 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~-~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs 233 (342)
.++.|..+|. +++... ....+...+..|+++++|++.++....+. |.+||. +++... +........+.+++++
T Consensus 165 --~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d 238 (300)
T 2qc5_A 165 --QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISE-YDIPTPNARPHAITAG 238 (300)
T ss_dssp --TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEEC
T ss_pred --CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEE-EECCCCCCCceEEEEC
Confidence 3678999998 554432 12234557899999999987777665665 468998 555433 2111123457899999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecC
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+++. ++++...++.|..|+..
T Consensus 239 ~~g~---l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 239 KNSE---IWFTEWGANQIGRITND 259 (300)
T ss_dssp STTC---EEEEETTTTEEEEECTT
T ss_pred CCCC---EEEeccCCCeEEEECCC
Confidence 9998 77777677999999873
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.34 E-value=2.5e-08 Score=86.25 Aligned_cols=232 Identities=9% Similarity=-0.032 Sum_probs=145.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CcEEEEeCCCCcEE-EEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 6 SSYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLC-YERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~-~g~~v~d~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
....+.+++++++|...++... .++..||.+ ++.. +... ......+.+..++. +.++.. .++.|..||
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------~~~~i~~~d 126 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEM------NGNRIGRIT 126 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEET------TTTEEEEEC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC-EEEEec------CCceEEEEC
Confidence 3467899999999997777664 457889976 4432 2211 12333444444443 333332 267899999
Q ss_pred CCCCcEEEEEe--cCCceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 82 TTTGTALRELN--FLTSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 82 ~~~~~~~~~~~--~~~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
. +++...... ....+.+++++++. ++++. ++.|..||. +++... +...........++.++++.+.++..
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~-- 201 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEI-- 201 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET--
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEcc--
Confidence 8 555432221 12468899998764 55555 468999998 665443 32222233456677777777666554
Q ss_pred CccEEEEEEccCCceeEE-EecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecC
Q 019349 157 TKGSVLVYNVMELHSHCE-IDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 235 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~~-~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d 235 (342)
.++.|.+||. +++.... +..+...+.+|+++++|++.++...++. |..||. +++. ..+........+.++++ ++
T Consensus 202 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~ 276 (299)
T 2z2n_A 202 IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNII-EEYPIQIKSAEPHGICF-DG 276 (299)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTEE-EEEECSSSSCCEEEEEE-CS
T ss_pred CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCce-EEEeCCCCCCccceEEe-cC
Confidence 3688999998 6653322 3345567899999999997777656666 468998 5543 33322122345889999 88
Q ss_pred CCcccEEEEEeCCCcEEEEecCCC
Q 019349 236 MQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 236 ~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
+. ++++.+ .+.|..++.++.
T Consensus 277 g~---l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 277 ET---IWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp SC---EEEEET-TTEEEEEEEC--
T ss_pred CC---EEEEec-CCcEEEEEcCcc
Confidence 87 555544 677888887653
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.31 E-value=3.7e-09 Score=92.27 Aligned_cols=219 Identities=10% Similarity=0.036 Sum_probs=139.1
Q ss_pred eEEEEEcCCCCEE-EEEcCC-cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 10 VFFVSFNQDNSGF-ALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 10 V~~l~fs~d~~~l-a~g~~~-g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
..+..|++++..| .+...+ .+..||..+++.........+..+.+..++++ ++.. ++.|.+||..+++.
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l-~v~~--------~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGY-VATI--------GTKFCALNWKEQSA 85 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSE-EEEE--------TTEEEEEETTTTEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCE-EEEE--------CCeEEEEECCCCcE
Confidence 4578899966554 555444 47899998876643333456666777777773 3332 45899999988765
Q ss_pred EEEEecC-----CceEEEEEcCCeEEEEEC------------CeEEEEECCC-CceeeEEeCCCCCceEEEEeeCCCccE
Q 019349 88 LRELNFL-----TSILAVRLNKKRLVIVLR------------EKTYIYDANT-LAILDTIDTVPNLKGLCAFSPSLNACF 149 (342)
Q Consensus 88 ~~~~~~~-----~~v~~i~~~~~~~~~~~d------------~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
....... ..+.++.++++..+.+++ ....+|.+.. ++....... ......++++|++..
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~---~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ---VDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE---ESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec---cccccceEEcCCCCE
Confidence 4333221 247889998875444431 2345555542 333222211 112345667777776
Q ss_pred EEEeCCCCccEEEEEEc--cCCce-----eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc
Q 019349 150 LAVPASTTKGSVLVYNV--MELHS-----HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT 222 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~--~~~~~-----~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~ 222 (342)
+..+.. .++.|.+||+ .++.. +..+..+......|+++++|++.++....++ |..||..+|+.+..+...
T Consensus 163 lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~~i~~p- 239 (297)
T 3g4e_A 163 FYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQTVKLP- 239 (297)
T ss_dssp EEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEEEEECS-
T ss_pred EEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEEEEECC-
Confidence 655543 4789999997 44432 2223334466889999999998888777776 469999989988877543
Q ss_pred CceeEEEEEEe-cCCCcccEEEEEeC
Q 019349 223 YPSTIFSLSFG-QSMQFQDILVATSS 247 (342)
Q Consensus 223 ~~~~v~~l~fs-~d~~~~~~l~~~s~ 247 (342)
...+++++|. ||++ .|.+++.
T Consensus 240 -~~~~t~~~f~g~d~~---~L~vt~~ 261 (297)
T 3g4e_A 240 -VDKTTSCCFGGKNYS---EMYVTCA 261 (297)
T ss_dssp -SSBEEEEEEESGGGC---EEEEEEB
T ss_pred -CCCceEEEEeCCCCC---EEEEEcC
Confidence 2358999998 8877 6665554
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.31 E-value=2.5e-10 Score=102.90 Aligned_cols=170 Identities=12% Similarity=0.137 Sum_probs=125.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCc-----------EEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGR-----------LCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (342)
..+++.+++++...+|++|+.+++++|+++..+ .........+..+.+ +.+.++++ . ++
T Consensus 37 ~~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~-------~~ 106 (388)
T 1xip_A 37 FASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-T-------RN 106 (388)
T ss_dssp SSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-E-------SS
T ss_pred cccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-c-------CC
Confidence 347999999999999999999999999864332 111112233666666 77777776 3 57
Q ss_pred eEEEEECCCCcEEEEE-ecCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 76 RLCLFNTTTGTALREL-NFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 76 ~i~iwd~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
.|++||+.+....... .+...+.++.+.+..++++. ||.+.+||+.+++... + ...+.+++++|++ ++.+
T Consensus 107 ~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~-----~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 107 ALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L-----AQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp EEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E-----EESEEEEEECSSE--EEEE
T ss_pred cEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c-----cCCceEEEEcCCc--eEEE
Confidence 9999998776544333 34557888887666666666 8999999999887643 2 1358899999998 3444
Q ss_pred CCCCccEEEEEEccCCce--eEEE------e---cccCCeeEEEECCCCCEEEE
Q 019349 154 ASTTKGSVLVYNVMELHS--HCEI------D---AHQAPLAAIVLSSNGMYIAT 196 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~--~~~~------~---~h~~~v~~i~~s~dg~~lat 196 (342)
. .||.+++|+....+. ..++ . +|...|.+|.|.+++.+|++
T Consensus 179 ~--~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 179 L--KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp E--TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred E--cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 4 579999999887775 5566 2 37889999999999999887
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.31 E-value=8.5e-10 Score=94.40 Aligned_cols=220 Identities=7% Similarity=-0.020 Sum_probs=133.8
Q ss_pred CCeEEEEECCCCcEEEEE-ecCCceEEEEEcCCe-EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 74 PRRLCLFNTTTGTALREL-NFLTSILAVRLNKKR-LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~-~~~~~v~~i~~~~~~-~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
++.|.+||..++...... .....+.+++++++. ++++. ++.|++||...... ..+.. ........++.++++.++
T Consensus 45 ~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~-~~~~~-~~~~~p~~i~~~~~g~l~ 122 (270)
T 1rwi_B 45 YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ-TVLPF-DGLNYPEGLAVDTQGAVY 122 (270)
T ss_dssp SCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC-EECCC-CSCSSEEEEEECTTCCEE
T ss_pred CCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE-eeeec-CCcCCCcceEECCCCCEE
Confidence 688999997655432211 112367788898764 55555 67999999876533 22221 112345667777777766
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEE
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSL 230 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l 230 (342)
++.. .++.|.+||..+.........+...+..|+++++|+++++...++. |.+||...+........ ....+.+|
T Consensus 123 v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~~~~~~~~~~~~~~~~--~~~~p~~i 197 (270)
T 1rwi_B 123 VADR--GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR-VVKLEAESNNQVVLPFT--DITAPWGI 197 (270)
T ss_dssp EEEG--GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTE-EEEECTTTCCEEECCCS--SCCSEEEE
T ss_pred EEEC--CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCE-EEEEecCCCceEeeccc--CCCCceEE
Confidence 6544 4688999986655443322233446789999999997777766666 57999876654332211 12457899
Q ss_pred EEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEe
Q 019349 231 SFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITY 310 (342)
Q Consensus 231 ~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (342)
++++++. ++++...++.|.+|+.+....... .... ...| ..+.+.++++.+++...
T Consensus 198 ~~d~~g~---l~v~~~~~~~v~~~~~~~~~~~~~-----------~~~~---~~~p-------~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 198 AVDEAGT---VYVTEHNTNQVVKLLAGSTTSTVL-----------PFTG---LNTP-------LAVAVDSDRTVYVADRG 253 (270)
T ss_dssp EECTTCC---EEEEETTTSCEEEECTTCSCCEEC-----------CCCS---CSCE-------EEEEECTTCCEEEEEGG
T ss_pred EECCCCC---EEEEECCCCcEEEEcCCCCcceee-----------ccCC---CCCc-------eeEEECCCCCEEEEECC
Confidence 9999998 788888889999999765432110 0000 0001 12233444465666667
Q ss_pred CCcEEEEEEecCCC
Q 019349 311 NGYFVEYIFSINNC 324 (342)
Q Consensus 311 dg~v~~~~~~~~~~ 324 (342)
++.|++|+++.++.
T Consensus 254 ~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 254 NDRVVKLTSLEHHH 267 (270)
T ss_dssp GTEEEEECCCGGGS
T ss_pred CCEEEEEcCCCccc
Confidence 99999998776543
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.31 E-value=1.5e-08 Score=91.42 Aligned_cols=273 Identities=10% Similarity=0.002 Sum_probs=165.1
Q ss_pred EEcCCCCEEEEEcC--C----cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCC---CCCCCeEEEEECCC
Q 019349 14 SFNQDNSGFALSTK--D----GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQP---SLSPRRLCLFNTTT 84 (342)
Q Consensus 14 ~fs~d~~~la~g~~--~----g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~d~~i~iwd~~~ 84 (342)
...|++.++.+... . .+.+||..+++++.....+....+.+.++++.+.++...... ...++.|.+||..+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 45688887766543 2 458999999987765544433366777888888776421000 01257899999999
Q ss_pred CcEEEEEecC--------CceEEEEEcCC--eEEEEE---CCeEEEEECCCCceeeE-EeCCCCCceEEEEeeCCCccEE
Q 019349 85 GTALRELNFL--------TSILAVRLNKK--RLVIVL---REKTYIYDANTLAILDT-IDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 85 ~~~~~~~~~~--------~~v~~i~~~~~--~~~~~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 150 (342)
.+.+.++... .....+.++++ .++++. ++.|.++| .+++.+.. +.... ...+.+.+...++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEE
Confidence 9988887654 23457788776 455554 36899999 99988877 65422 1333444443344
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEe-----cccCCe-eEEEECCCCCEEEEEeCCCcEEEEEEcCCCe--eEEEecc--
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEID-----AHQAPL-AAIVLSSNGMYIATASEQGTIIRVFLVSEAT--KSYSFRR-- 220 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~-----~h~~~v-~~i~~s~dg~~lat~s~dg~~irlwd~~~~~--~~~~~~~-- 220 (342)
+.+ .||.+.++|. +++.+.... ....++ ....+.+++..++..+..+.+ .+.|+.++. .+..+..
T Consensus 182 ~~~---~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v-~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 182 LLC---AQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKI-LQADISAAGATNKAPIDALS 256 (373)
T ss_pred EEc---CCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceE-EEEeccCCcceEeeeeeecC
Confidence 333 4799999999 877663322 112222 234567776655554566764 689987553 2222211
Q ss_pred ------CcCceeEEEEEEecCCCcccEEEEEeC----------CCcEEEEecCCCCCCCCCCCccccccccccccccccc
Q 019349 221 ------GTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVL 284 (342)
Q Consensus 221 ------~~~~~~v~~l~fs~d~~~~~~l~~~s~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
+..+.....++|+||++ .|.++.. .+.|.++|+++.+..++.. ++. ......|
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~---~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-----~g~---~p~~i~~ 325 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSD---GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-----LGH---DVDAISV 325 (373)
T ss_pred CcccccceecCceEeEEECCCCC---EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-----CCC---CcCeEEE
Confidence 00122244578999988 6766543 3579999998776533210 000 0112233
Q ss_pred cccccceeeeccCCCcccc-EEEEEE-eCCcEEEEEEec
Q 019349 285 DPADHHVLRNAFPAGVKRA-SVSVIT-YNGYFVEYIFSI 321 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~v~~~~~~~ 321 (342)
+ ++++ .++++. .++.|.+|+...
T Consensus 326 s--------------~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 326 A--------------QDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred C--------------CCCCeEEEEEcCCCCeEEEEECCC
Confidence 3 4446 677777 489999987654
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.29 E-value=3.1e-10 Score=102.27 Aligned_cols=174 Identities=10% Similarity=0.133 Sum_probs=122.1
Q ss_pred CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc-----------EEEEEecCCceEEEEEcCCeEEEEECCeEE
Q 019349 48 AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT-----------ALRELNFLTSILAVRLNKKRLVIVLREKTY 116 (342)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~v~~i~~~~~~~~~~~d~~i~ 116 (342)
.+..+++......++.++. ..+++|+++..+ ....+..+. |..++|+...++++.++.|+
T Consensus 39 ~~nlLais~~~gll~a~~~--------~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG--------SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVSTRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEET--------TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEEESSEEE
T ss_pred cccEEEEcCCCCEEEEeCC--------CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEEcCCcEE
Confidence 4566677666666655543 578889965332 224556677 99999966677777788999
Q ss_pred EEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEE
Q 019349 117 IYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIAT 196 (342)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat 196 (342)
+||+.+.........+.. .+..+.+.+.. +|+.. .||.|.+||+.++.... +...|+|++|||+| ++.
T Consensus 110 v~dv~sl~~~~~~~~~~~--~v~~i~~~~p~--~av~~--~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEK--PVFQLKNVNNT--LVILN--SVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp EEESSSTTCEEEEEECSS--CEEEEEECSSE--EEEEE--TTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEE
T ss_pred EEEchhhhccCccceeec--ceeeEEecCCC--EEEEE--CCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEE
Confidence 999987754444433332 34555554443 55555 58999999999877643 45689999999999 788
Q ss_pred EeCCCcEEEEEEcCCCee--EEEecc----C---cCceeEEEEEEecCCCcccEEEEEe
Q 019349 197 ASEQGTIIRVFLVSEATK--SYSFRR----G---TYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 197 ~s~dg~~irlwd~~~~~~--~~~~~~----~---~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
|..||++ ++|+...++. ..++.. + .+...|.+|.|.+++. +|++-+
T Consensus 178 g~~dg~i-~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~---flv~y~ 232 (388)
T 1xip_A 178 LLKDRSF-QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD---FLAVFG 232 (388)
T ss_dssp EETTSCE-EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE---EEEEEE
T ss_pred EEcCCcE-EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe---EEEEEc
Confidence 9999985 8999887774 555622 1 1346799999999998 777743
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.29 E-value=1.6e-09 Score=105.92 Aligned_cols=245 Identities=9% Similarity=0.042 Sum_probs=149.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-----C-cEEEEeCCCCcEEEEEeeCC-EEEEEEcCCCCeEEEEcCCCCC------CC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTK-----D-GFKIFDSSTGRLCYERAVGA-FSIVEMLYSSSLLAIVGAGEQP------SL 72 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~-----~-g~~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~------~~ 72 (342)
+...+..++|||||++||-+.+ . .+++||+++++.+....... ...+.|. +++.++++...... ..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 3346888999999999885432 1 26899999998654321111 2345677 88888877653110 01
Q ss_pred CCCeEEEEECCCCcE--EEEEec----CCceEEEEEcCCeEE--EEE-----CCeEEEEECCCCc-eeeEEeCCCCCceE
Q 019349 73 SPRRLCLFNTTTGTA--LRELNF----LTSILAVRLNKKRLV--IVL-----REKTYIYDANTLA-ILDTIDTVPNLKGL 138 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~--~~~~~~----~~~v~~i~~~~~~~~--~~~-----d~~i~i~d~~~~~-~~~~~~~~~~~~~~ 138 (342)
....|.+|++.++.. ...+.. +....++.+++++.. +.. .+.|+++|+.++. ....+..+.... .
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~-~ 284 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD-V 284 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC-E
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce-E
Confidence 245699999987653 222222 224678888887533 322 2489999998763 344454433322 2
Q ss_pred EEEeeCCCccEEEEeCCC-CccEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCCCc--EEEEEEcCCCe
Q 019349 139 CAFSPSLNACFLAVPAST-TKGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQGT--IIRVFLVSEAT 213 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~-~~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~--~irlwd~~~~~ 213 (342)
..+++.++ .+++....+ ..+.|..+|+.++.. ...+..|...+. .|++++++|+....++. .|++||+..+
T Consensus 285 ~~~~~~g~-~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~- 360 (693)
T 3iuj_A 285 SLVDNKGS-TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK- 360 (693)
T ss_dssp EEEEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-
T ss_pred EEEeccCC-EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-
Confidence 22444333 333333321 247899999987654 345666666655 89999998887765541 2578998744
Q ss_pred eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC----CcEEEEecCCCC
Q 019349 214 KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS----GSLHVFSPGFAI 260 (342)
Q Consensus 214 ~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d----g~i~vwd~~~~~ 260 (342)
....+... ....+..++++|++. .|+....+ ++|+.||+++++
T Consensus 361 ~~~~l~~p-~~~~~~~~~~~~d~~---~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 361 RVREVALP-GLGSVSGFNGKHDDP---ALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEECCS-SSSEEEECCCCTTCS---CEEEEEECSSSCCEEEEECTTTCC
T ss_pred eeEEeecC-CCceEEeeecCCCCC---EEEEEecCCCCCCEEEEEECCCCe
Confidence 44444322 234577788888887 55555444 789999987654
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.26 E-value=1.5e-09 Score=106.16 Aligned_cols=232 Identities=7% Similarity=-0.017 Sum_probs=139.1
Q ss_pred cCCCCEEEEEcC-Cc---EEEEe--CCCCc--EEEEEe----eC--CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEE
Q 019349 16 NQDNSGFALSTK-DG---FKIFD--SSTGR--LCYERA----VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (342)
Q Consensus 16 s~d~~~la~g~~-~g---~~v~d--~~~~~--~~~~~~----~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd 81 (342)
+|+|++++-... .+ ..+|. ...++ .+.... .+ .+....+.++++.+++..... ...+.+|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~--G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN--AADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET--TCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC--CCceEEEEEEE
Confidence 478988775433 32 35664 33442 222211 11 355667888888888664210 02357999999
Q ss_pred CCCCcEE-EEEecCCceEEEEEcCCe--EEEEE-CCe-------------EEEEECCCCcee--eEEeCCCCCceEEEEe
Q 019349 82 TTTGTAL-RELNFLTSILAVRLNKKR--LVIVL-REK-------------TYIYDANTLAIL--DTIDTVPNLKGLCAFS 142 (342)
Q Consensus 82 ~~~~~~~-~~~~~~~~v~~i~~~~~~--~~~~~-d~~-------------i~i~d~~~~~~~--~~~~~~~~~~~~~~~~ 142 (342)
+.+++.+ ...........+.|+++. ++... +.. |++|++.+++.. ..+....+......+.
T Consensus 154 l~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 154 VDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 9998865 211111122678898874 44444 443 999999887632 2223333334566778
Q ss_pred eCCCccEEEEeCCCC--ccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeC----CCcEEEEEEcCCCee--
Q 019349 143 PSLNACFLAVPASTT--KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASE----QGTIIRVFLVSEATK-- 214 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~--~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~----dg~~irlwd~~~~~~-- 214 (342)
++|++.+|++...+. ...|.+||..+++ ...+..+...+....+ ++|. |+..+. +++ |.+||+.+++.
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~-l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQR-VFEVDPAKPARAS 309 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCE-EEEEBTTBCSGGG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCE-EEEEeCCCCCccC
Confidence 889998888766311 2367777665554 4455556666666666 5666 444443 455 46999987652
Q ss_pred EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 215 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 215 ~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
...+..+.....+.+++|+ ++. ++++...|+..+||.++
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~~---lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GGH---LSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TTE---EEEEEEETTEEEEEEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CCE---EEEEEEECCEEEEEEEe
Confidence 2333222223457888998 666 88889999998888765
No 208
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.24 E-value=1.1e-08 Score=92.14 Aligned_cols=259 Identities=11% Similarity=0.064 Sum_probs=152.9
Q ss_pred CCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCc
Q 019349 18 DNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTS 96 (342)
Q Consensus 18 d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 96 (342)
++..+.+++.++ +..+|..+++++.................+.+.+.+ .++.|..+|.++|+.+........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~-------~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHT-------SNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEEC-------TTSEEEEEETTTCCEEEEEECCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEc-------CCCeEEEEECCCCcEEEEEeCCCC
Confidence 344566666554 799999999887665432211000011133444433 378999999999999988876544
Q ss_pred eE------EEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCce-----EEEEeeCC--CccEEEEeCCCCccEEE
Q 019349 97 IL------AVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKG-----LCAFSPSL--NACFLAVPASTTKGSVL 162 (342)
Q Consensus 97 v~------~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~l~~~~~~~~g~i~ 162 (342)
+. ......+.+++.. ++.+..+|..+++.+........... +..+...| .+..+.+++ .+|.+.
T Consensus 175 ~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~--~~g~l~ 252 (376)
T 3q7m_A 175 SLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA--YNGNLT 252 (376)
T ss_dssp ----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC--TTSCEE
T ss_pred ceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe--cCcEEE
Confidence 32 2233455555555 67999999999988877654321000 00000000 112444444 478899
Q ss_pred EEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEE
Q 019349 163 VYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDIL 242 (342)
Q Consensus 163 iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l 242 (342)
.+|..+++.+..... .....+.. ++..|..++.+|.+ ..+|..+|+.+.+..... ...+...... +. .|
T Consensus 253 ~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l-~~~d~~tG~~~w~~~~~~-~~~~~~~~~~--~~---~l 321 (376)
T 3q7m_A 253 ALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRV-MALTIDGGVTLWTQSDLL-HRLLTSPVLY--NG---NL 321 (376)
T ss_dssp EEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCE-EEEETTTCCEEEEECTTT-TSCCCCCEEE--TT---EE
T ss_pred EEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeE-EEEECCCCcEEEeecccC-CCcccCCEEE--CC---EE
Confidence 999999987755442 23444444 35678888888885 699999999887764211 1112222232 33 68
Q ss_pred EEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEE
Q 019349 243 VATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 318 (342)
Q Consensus 243 ~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~ 318 (342)
.+++.+|.|+++|.++++...+.. ..+. ..+.. + ...++.|++++.||.++.|+
T Consensus 322 ~v~~~~g~l~~~d~~tG~~~~~~~--------~~~~---~~~~~----------~-~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 322 VVGDSEGYLHWINVEDGRFVAQQK--------VDSS---GFQTE----------P-VAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE--------CCTT---CBCSC----------C-EEETTEEEEEBTTSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEe--------cCCC---cceeC----------C-EEECCEEEEEeCCCEEEEEe
Confidence 899999999999988765421100 0000 01100 0 01237899999999999885
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.23 E-value=3.7e-08 Score=87.13 Aligned_cols=217 Identities=10% Similarity=-0.003 Sum_probs=134.0
Q ss_pred eEEEEEcCCCCE-EEEEcC-CcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 10 VFFVSFNQDNSG-FALSTK-DGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 10 V~~l~fs~d~~~-la~g~~-~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
..+.+|+|++.. +.++.. .++.+||.++++.........+..+.+..+++.++ +. .+.|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v-~~--------~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLI-AS--------DDGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEE-EE--------TTEEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEE-EE--------CCCEEEEECCCCcE
Confidence 467899998654 455544 45789999887654322234555555555554443 32 23599999988875
Q ss_pred EEEEecC-----CceEEEEEcCCeEEEEE-C--------CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 88 LRELNFL-----TSILAVRLNKKRLVIVL-R--------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 88 ~~~~~~~-----~~v~~i~~~~~~~~~~~-d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
....... ..+.++.+++++.+.++ . +.|+.++ +++.. .+.... .....+++++++..+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~--~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADI--SIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEE--SSEEEEEECTTSCEEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCC--cccCCeEEcCCCCEEEEE
Confidence 4333221 25788999887544433 2 3566666 45433 221111 123456677788766655
Q ss_pred CCCCccEEEEEEcc--CC-ce-----eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCce
Q 019349 154 ASTTKGSVLVYNVM--EL-HS-----HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS 225 (342)
Q Consensus 154 ~~~~~g~i~iwd~~--~~-~~-----~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~ 225 (342)
.. .++.|.+||+. ++ +. +..+..+...+..++++++|++.++...++.+ ..||. +++.+..+... ..
T Consensus 197 ~~-~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v-~~~d~-~g~~~~~i~~~--~~ 271 (326)
T 2ghs_A 197 DT-KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAV-DRYDT-DGNHIARYEVP--GK 271 (326)
T ss_dssp ET-TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEE-EEECT-TCCEEEEEECS--CS
T ss_pred EC-CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEE-EEECC-CCCEEEEEECC--CC
Confidence 43 46899999986 55 31 22233334567889999999988777666664 68998 67776666432 23
Q ss_pred eEEEEEEe-cCCCcccEEEEEeCC
Q 019349 226 TIFSLSFG-QSMQFQDILVATSSS 248 (342)
Q Consensus 226 ~v~~l~fs-~d~~~~~~l~~~s~d 248 (342)
.+.+++|+ |++. .|.+++..
T Consensus 272 ~~~~~af~g~d~~---~L~vt~~~ 292 (326)
T 2ghs_A 272 QTTCPAFIGPDAS---RLLVTSAR 292 (326)
T ss_dssp BEEEEEEESTTSC---EEEEEEBC
T ss_pred CcEEEEEecCCCC---EEEEEecC
Confidence 58999998 8876 66555443
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.23 E-value=2.6e-09 Score=97.54 Aligned_cols=237 Identities=15% Similarity=0.065 Sum_probs=151.2
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEeCCCCcEEEEEeeC---------CEEEEEEcCCCCeEEEEcCCCCCC
Q 019349 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (342)
Q Consensus 12 ~l~fs~d~~~la~g~-----------~~g~~v~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (342)
.++|+|||++|+++. ++.+.++|..+++.+.....+ .-..+.+.++++.+.+....
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---- 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---- 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----
Confidence 799999999887775 345799999999877655432 11134566777777766531
Q ss_pred CCCCeEEEEECCCCcEEEEEecCCceEEEEEcC-CeEEEEE-CCeEEEEECCCCceeeE----EeCCCCCceEEEEeeCC
Q 019349 72 LSPRRLCLFNTTTGTALRELNFLTSILAVRLNK-KRLVIVL-REKTYIYDANTLAILDT----IDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 72 ~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~-~~~~~~~-d~~i~i~d~~~~~~~~~----~~~~~~~~~~~~~~~~~ 145 (342)
.++.|.+.|+.+++.+.++..+.. ..+.... ..++... |+++.+.++.+++.... +.....+... .+...+
T Consensus 198 -~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~-~~~~~~ 274 (426)
T 3c75_H 198 -PAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLIN-HPAFSL 274 (426)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCS-CCEECT
T ss_pred -CCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceee-EeeecC
Confidence 267899999999999998887553 1222222 2233333 88888888866655432 1111121111 122244
Q ss_pred CccEEEEeCCCCccEEEEEEccCCcee--EEEec----------ccCCeeEEEECCCCCEEEEEeC----------CCcE
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELHSH--CEIDA----------HQAPLAAIVLSSNGMYIATASE----------QGTI 203 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~~~--~~~~~----------h~~~v~~i~~s~dg~~lat~s~----------dg~~ 203 (342)
++..+++.. ..|.|.+.|+...... ..+.. .......++++|||++|..+.. +++
T Consensus 275 dg~~~~~~s--~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~- 351 (426)
T 3c75_H 275 RSGRLVWPT--YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF- 351 (426)
T ss_dssp TTCEEEEEB--TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE-
T ss_pred CCCEEEEEe--CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE-
Confidence 444555555 3588999998654321 11110 1112234789999987777642 234
Q ss_pred EEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCCCCCCC
Q 019349 204 IRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAINQR 263 (342)
Q Consensus 204 irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~~~~ 263 (342)
+-++|+.+.+.+.++..+ ....+|+|+||++ .+|+++. .+++|.|+|+.+.+..+
T Consensus 352 VsVID~~T~kvv~~I~vg---~~P~gia~spDg~--~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 352 VVVLNAETGERINKIELG---HEIDSINVSQDAE--PLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp EEEEETTTCCEEEEEEEE---EEECEEEECCSSS--CEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEECCCCeEEEEEECC---CCcCeEEEccCCC--EEEEEEcCCCCeEEEEECCCCCEEE
Confidence 579999999999988643 2478899999986 2566666 58999999999887543
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.19 E-value=6.6e-08 Score=84.24 Aligned_cols=195 Identities=11% Similarity=0.032 Sum_probs=124.4
Q ss_pred EEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe-EEEEECCeEEEEECCCCceeeEEeC
Q 019349 53 EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVLREKTYIYDANTLAILDTIDT 131 (342)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~d~~i~i~d~~~~~~~~~~~~ 131 (342)
.+....+.+.++.. ..++|..||..+++. ..+..+..+.+++++++. ++++.++.|.+||..+++.......
T Consensus 19 ~w~~~~~~l~~~d~------~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 19 VWEEVSNSLLFVDI------PAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEETTTTEEEEEET------TTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEEC
T ss_pred eEECCCCEEEEEEC------CCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEec
Confidence 44454556666654 378999999988765 456667789999998765 5556688999999988765433322
Q ss_pred CC--CCceEEEEeeCCCccEEEEeCC---------CCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEE-eC
Q 019349 132 VP--NLKGLCAFSPSLNACFLAVPAS---------TTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATA-SE 199 (342)
Q Consensus 132 ~~--~~~~~~~~~~~~~~~~l~~~~~---------~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~-s~ 199 (342)
.. .......+..++++.+.+.... ...+.|..+|.. ++ +..+..+....+.++|+|||+.|..+ +.
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HH-VKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC-EEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CC-EEEEeeccccccceEEcCCCCEEEEecCC
Confidence 21 1234556777788876664421 012344444433 33 22333344557899999999877554 44
Q ss_pred CCcEEEEEEc--CCCeeE--EEecc-CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 200 QGTIIRVFLV--SEATKS--YSFRR-GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 200 dg~~irlwd~--~~~~~~--~~~~~-~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+++ |.+||+ .+|... ..+.. .........|++.+++. +.++....+.|.+||.++++
T Consensus 170 ~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~---lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 170 SYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK---LWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp GTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC---EEEEEETTTEEEEECTTTCC
T ss_pred CCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC---EEEEEcCCCEEEEEcCCCce
Confidence 565 578987 455431 11111 11124578899999998 78877788899999987554
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.18 E-value=2.1e-07 Score=80.39 Aligned_cols=228 Identities=11% Similarity=0.040 Sum_probs=143.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-CcEEEEeCCCCcEE-EEEe--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 7 SYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLC-YERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~-~g~~v~d~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
...+.+++++++|+..++... ..+..||.. ++.. +... ......+.+..+.+.. ++.. .++.|..+|.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~------~~~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIW-FTQL------NGDRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEE-EEET------TTTEEEEECT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEE-EEcc------CCCeEEEECC
Confidence 357899999999997776654 457899987 6543 2221 1234444454444433 3332 2578999998
Q ss_pred CCCcEEEEEec---CCceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 83 TTGTALRELNF---LTSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 83 ~~~~~~~~~~~---~~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
. ++.. .+.. ...+.+++++++. ++++. .+.|..|+. +++... +...........++.++++.+.++..
T Consensus 133 ~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~-- 206 (300)
T 2qc5_A 133 D-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEI-- 206 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET--
T ss_pred C-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEcc--
Confidence 7 5544 3322 2468889997754 55555 568999998 555443 43322333456677777776666554
Q ss_pred CccEEEEEEccCCceeE-EEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecC
Q 019349 157 TKGSVLVYNVMELHSHC-EIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 235 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~~~-~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d 235 (342)
..+.|.+||. +++... .+..+...+.+|+++++|++.++...++. |..||. +++.. .+........+.+++++++
T Consensus 207 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~ 282 (300)
T 2qc5_A 207 MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKD 282 (300)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTT
T ss_pred CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCC
Confidence 3578999998 444332 23344567899999999997777655666 468998 45433 3322212334788999999
Q ss_pred CCcccEEEEEeCCCcEEEEecC
Q 019349 236 MQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 236 ~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+. ++++.. . .|..+|.+
T Consensus 283 g~---l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 283 GS---VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp SC---EEEECS-S-EEEEEEEC
T ss_pred CC---EEEEcc-C-ceEEeCCC
Confidence 97 555444 4 77777653
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.18 E-value=5.1e-12 Score=114.20 Aligned_cols=259 Identities=11% Similarity=0.030 Sum_probs=132.1
Q ss_pred CCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCC-
Q 019349 18 DNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT- 95 (342)
Q Consensus 18 d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~- 95 (342)
++..+++++.++ +..||..+|+++.....+.+....+..+.. +++++. .|+.|+.||.++|+.+....+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~-~~v~~s------~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEP-AFLPDP------NDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----C-CEEECT------TTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCC-EEEEeC------CCCEEEEEECCCCceeeeeeccCc
Confidence 566788887766 699999999988765543322111222222 333332 48999999999998877665431
Q ss_pred -ceE-EEEE-cCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce
Q 019349 96 -SIL-AVRL-NKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (342)
Q Consensus 96 -~v~-~i~~-~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~ 171 (342)
.+. ...+ ..+.++++. ++.++.||..+++.+..+..+.. ..+++ ++..+++++ .++.|..||.++++.
T Consensus 81 ~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p--~~~~v~~~~--~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 81 ELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSP--STSLLYLGR--TEYTITMYDTKTREL 152 (369)
T ss_dssp HHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEE--EEEEEECCCSSSSSC
T ss_pred cccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccc--cCCEEEEEe--cCCEEEEEECCCCCE
Confidence 110 0111 223334433 78999999999988877654321 12233 445666655 589999999999987
Q ss_pred eEEEecccCCeeEEEECCCC---CEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEE----EE
Q 019349 172 HCEIDAHQAPLAAIVLSSNG---MYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDIL----VA 244 (342)
Q Consensus 172 ~~~~~~h~~~v~~i~~s~dg---~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l----~~ 244 (342)
+..+..+. ....++++++ ..+++++.||.+ +.||..+|+.+.++..+ ...+...++++++. .. ..
T Consensus 153 ~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v-~a~d~~tG~~~W~~~~~--~pv~~~~~~~~dg~---~~v~~~~~ 224 (369)
T 2hz6_A 153 RWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLV-VTVDSESGDVLWIQNYA--SPVVAFYVWQREGL---RKVMHINV 224 (369)
T ss_dssp CCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEE-EEECTTTCCEEEEEECS--SCEEEEEECTTSSC---EEECCEEE
T ss_pred EEeEeccc--ccCccccCCccccceEEEECCCCEE-EEEECCCCcEEEEecCC--CceEEEEEecCCce---Eeccceee
Confidence 65554321 2233444432 557778889974 79999999988877532 11233345566664 21 12
Q ss_pred EeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 245 TSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 245 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
+ ++.++.+|.++++.. ...+|.......... + ...++.|++++.||.++.++...
T Consensus 225 ~--~~~l~~ld~~tG~~~-----------------~~~~W~~~~~~~~~s--p-~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 225 A--VETLRYLTFMSGEVG-----------------RITKWKYPFPKETEA--K-SKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp E--HHHHHHHHHHHHHHH-----------------HHHTSCCCCCCHHHH--H-HHSEEEECBEECSSCEECCEEEE
T ss_pred c--ccceeeeehhcCCcc-----------------cceeeeeccCccccc--c-ccccceEEEecccCCEEecCccc
Confidence 2 345666665443300 001232211000000 0 01236899999999999998764
No 214
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.18 E-value=5.4e-08 Score=87.59 Aligned_cols=220 Identities=9% Similarity=0.036 Sum_probs=138.0
Q ss_pred CCEEEEEcCC-cEEEEeCCCCcEEEEEeeCC----------EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 19 NSGFALSTKD-GFKIFDSSTGRLCYERAVGA----------FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 19 ~~~la~g~~~-g~~v~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
+..+.+++.+ .+..||..+++++....... ..........+.+.+.+. ++.|..+|.++|+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------KAQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------TSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------CCEEEEEECCCCCE
Confidence 4566677655 57999999998876554321 111122223445554443 78999999999999
Q ss_pred EEEEecCCceE-EEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCc-----eEEEEeeCCCccEEEEeCCCCccE
Q 019349 88 LRELNFLTSIL-AVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLK-----GLCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 88 ~~~~~~~~~v~-~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
+........+. ......+.+++.. ++.++.+|..+++.+.......... ....+. ++ .+.++. .+|.
T Consensus 126 ~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~-~v~~g~--~~g~ 199 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FG-AAVVGG--DNGR 199 (376)
T ss_dssp EEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TT-EEEECC--TTTE
T ss_pred EEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CC-EEEEEc--CCCE
Confidence 98887654332 2234455666655 7799999999999888776533211 111111 22 444444 4789
Q ss_pred EEEEEccCCceeEEEecccCC-------eeEEEECC--CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEE
Q 019349 161 VLVYNVMELHSHCEIDAHQAP-------LAAIVLSS--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 161 i~iwd~~~~~~~~~~~~h~~~-------v~~i~~s~--dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~ 231 (342)
|..+|..+++.+......... +..+.-+| .+..+..++.+|.+ ..+|..+|+.+.+.... ....+.
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l-~~~d~~tG~~~w~~~~~----~~~~~~ 274 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL-TALDLRSGQIMWKRELG----SVNDFI 274 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE-EEEETTTCCEEEEECCC----CEEEEE
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE-EEEECCCCcEEeeccCC----CCCCce
Confidence 999999999877655422100 00011111 24677778888885 69999999988776432 233444
Q ss_pred EecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.. +. .|.+++.++.|..+|.++++.
T Consensus 275 ~~--~~---~l~~~~~~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 275 VD--GN---RIYLVDQNDRVMALTIDGGVT 299 (376)
T ss_dssp EE--TT---EEEEEETTCCEEEEETTTCCE
T ss_pred EE--CC---EEEEEcCCCeEEEEECCCCcE
Confidence 43 44 688888999999999887754
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.17 E-value=6e-08 Score=84.63 Aligned_cols=177 Identities=11% Similarity=0.094 Sum_probs=113.3
Q ss_pred CCeEEEEECCCCcEEEEEe-----cCCceEEEEEcCC-e-EEEEE-CCeEEEEECCCCceeeE-EeCCCC--CceEEEEe
Q 019349 74 PRRLCLFNTTTGTALRELN-----FLTSILAVRLNKK-R-LVIVL-REKTYIYDANTLAILDT-IDTVPN--LKGLCAFS 142 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~-----~~~~v~~i~~~~~-~-~~~~~-d~~i~i~d~~~~~~~~~-~~~~~~--~~~~~~~~ 142 (342)
++.|.+||..+++...... ....+.++.++++ . ++++. .+.|.+||.. ++.... ...... ...+..++
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~ 123 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCA 123 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEE
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEE
Confidence 6789999988887643222 2256889999887 4 56665 4589999988 654322 111111 12345667
Q ss_pred eCCCccEEEEeCCCC--------------ccEEEEEEccCCceeEEEecccCCeeEEEEC----CCCCEEEEE-eCCCcE
Q 019349 143 PSLNACFLAVPASTT--------------KGSVLVYNVMELHSHCEIDAHQAPLAAIVLS----SNGMYIATA-SEQGTI 203 (342)
Q Consensus 143 ~~~~~~~l~~~~~~~--------------~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s----~dg~~lat~-s~dg~~ 203 (342)
.++++.+.++... . .+.|..||.. ++.. .+..+....+.++++ |+|+.|..+ ..++.
T Consensus 124 ~d~~g~l~v~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~- 199 (314)
T 1pjx_A 124 FDYEGNLWITAPA-GEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK- 199 (314)
T ss_dssp ECTTSCEEEEECB-CBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE-
T ss_pred ECCCCCEEEEecC-cccccccccccccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCe-
Confidence 7777777665542 1 1567777765 4433 233344556889999 999766555 45565
Q ss_pred EEEEEcC-CCee-----EEEeccCcCc-eeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 204 IRVFLVS-EATK-----SYSFRRGTYP-STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 204 irlwd~~-~~~~-----~~~~~~~~~~-~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
|.+||.. +++. ...+.. .. ..+..+++++++. ++++...++.|.+||.++.+
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~--~~~~~p~~i~~d~~G~---l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPG--THEGGADGMDFDEDNN---LLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCC--CSSCEEEEEEEBTTCC---EEEEEETTTEEEEECTTCBS
T ss_pred EEEEECCCCCccccceEEEECCC--CCCCCCCceEECCCCC---EEEEEcCCCEEEEEcCCCCc
Confidence 5799986 4542 222221 11 4578899999998 78877788999999976443
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=8.6e-09 Score=94.11 Aligned_cols=271 Identities=11% Similarity=0.046 Sum_probs=167.4
Q ss_pred CCCCEEEEEcC------CcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCC---CCCCeEEEEECCCCcE
Q 019349 17 QDNSGFALSTK------DGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPS---LSPRRLCLFNTTTGTA 87 (342)
Q Consensus 17 ~d~~~la~g~~------~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~d~~i~iwd~~~~~~ 87 (342)
+++..+.+... +.+.++|+.+++++.....+...-+.+.++.+.+.+........ -.++.|.++|..+++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 57777766544 35799999999888766543333577778888777664200000 0156899999999999
Q ss_pred EEEEecC--------CceEEEEEcCC--eEEEEE---CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeC
Q 019349 88 LRELNFL--------TSILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (342)
Q Consensus 88 ~~~~~~~--------~~v~~i~~~~~--~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 154 (342)
+.++..+ .....+.++++ .++++. ++.|.+.|+.+++.+.++.... ...+.+.+...+++.+
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~- 236 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNC- 236 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEE-
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEc-
Confidence 9988764 23456778775 466655 4689999999999999887632 1334444443444444
Q ss_pred CCCccEEEEEEccCCceeEE----EecccCCe-eEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeE--EEecc-------
Q 019349 155 STTKGSVLVYNVMELHSHCE----IDAHQAPL-AAIVLSSNGMYIATASEQGTIIRVFLVSEATKS--YSFRR------- 220 (342)
Q Consensus 155 ~~~~g~i~iwd~~~~~~~~~----~~~h~~~v-~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~--~~~~~------- 220 (342)
.||.+.+.++.+++.... +.....++ ..+.|++++..++..+..|++ .+.|+..+... ..+..
T Consensus 237 --~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V-~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 237 --RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKI-FQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp --TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEE-EEEEECSSCEEECCCEESSCTTTGG
T ss_pred --CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcE-EEEeccCCceEEeeeeeeccccccc
Confidence 367888888865554422 22222222 235689999888887888874 69998655421 11110
Q ss_pred -CcCceeEEEEEEecCCCcccEEEEEeC----------CCcEEEEecCCCCCCCCCCCcccccccccccccccccccccc
Q 019349 221 -GTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADH 289 (342)
Q Consensus 221 -~~~~~~v~~l~fs~d~~~~~~l~~~s~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (342)
+..+.....++|+||++ +|.++.. .++|.++|+++.+..++.. + +. .-
T Consensus 314 ~g~~p~g~~~va~s~dg~---rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~-----v----g~---~P------ 372 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSD---RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE-----L----GH---EI------ 372 (426)
T ss_dssp GTEEECSSSCEEEEGGGT---EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-----E----EE---EE------
T ss_pred cccccCCceeeEEcCCCC---EEEEEecccccccccCCCCEEEEEECCCCeEEEEEE-----C----CC---Cc------
Confidence 00011122378999987 6666542 3579999998876543200 0 00 01
Q ss_pred ceeeeccCCCcccc-EEEEEE-eCCcEEEEEEe
Q 019349 290 HVLRNAFPAGVKRA-SVSVIT-YNGYFVEYIFS 320 (342)
Q Consensus 290 ~~~~~~~~~~~~~~-~l~~~~-~dg~v~~~~~~ 320 (342)
..+.+.++++ .+++.. .++.|.+++..
T Consensus 373 ----~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 373 ----DSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp ----CEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred ----CeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 1223344556 888888 49999999754
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.15 E-value=1.9e-08 Score=90.33 Aligned_cols=275 Identities=11% Similarity=0.023 Sum_probs=167.0
Q ss_pred EEEEEcCCCCEEEEEcC------CcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCC-C--CCCCCeEEEEE
Q 019349 11 FFVSFNQDNSGFALSTK------DGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQ-P--SLSPRRLCLFN 81 (342)
Q Consensus 11 ~~l~fs~d~~~la~g~~------~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--~~~d~~i~iwd 81 (342)
......|++..+.+... +.+.++|..+++.+.....+....+.+.++++.+.++..... . ...++.|.+||
T Consensus 36 ~~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 36 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eeeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 34567899999887754 247899999998876665433334788888887776641000 0 00256899999
Q ss_pred CCCCcEEEEEecCC--------ceEEEEEcCC--eEEEEE---CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCcc
Q 019349 82 TTTGTALRELNFLT--------SILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNAC 148 (342)
Q Consensus 82 ~~~~~~~~~~~~~~--------~v~~i~~~~~--~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (342)
..+++.+.++..+. ....+.++++ .++++. ++.|.++|+.+++.+.++.... ...+.+.+...
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~P~g~~~ 191 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHIFPTAPDT 191 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----cceeecCCCce
Confidence 99999999887542 3556788776 456664 4689999999999999997532 12233333333
Q ss_pred EEEEeCCCCccEEEEEEccC-CceeEEEeccc----CCee-EEEEC-CCCCEEEEEeCCCcEEEEEEcCCCe--eEEEec
Q 019349 149 FLAVPASTTKGSVLVYNVME-LHSHCEIDAHQ----APLA-AIVLS-SNGMYIATASEQGTIIRVFLVSEAT--KSYSFR 219 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~-~~~~~~~~~h~----~~v~-~i~~s-~dg~~lat~s~dg~~irlwd~~~~~--~~~~~~ 219 (342)
+++.+ .||.+.+.++.+ ++.......+. .++. ...|. ++|+++. .+.+|++ .+.|+.++. .+..+.
T Consensus 192 ~~~~~---~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V-~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 192 FFMHC---RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKI-HQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp EEEEE---TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEE-EEEECTTSSCEECCCEE
T ss_pred eEEEC---CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEE-EEEECCCCcceeeccee
Confidence 44433 378888888875 55432221111 2221 23553 6776544 5557874 799997654 222221
Q ss_pred --------cCcCceeEEEEEEecCCCcccEEEEEeC----------CCcEEEEecCCCCCCCCCCCcccccccccccccc
Q 019349 220 --------RGTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVN 281 (342)
Q Consensus 220 --------~~~~~~~v~~l~fs~d~~~~~~l~~~s~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
.+..+.....++++|+++ .|.+... .++|.++|+++.+..++.. ++.
T Consensus 267 ~~~~~~~~~g~~p~g~q~~a~~~~~~---~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~---------vg~--- 331 (386)
T 3sjl_D 267 ALTEAERADGWRPGGWQQVAYHRALD---RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---------MGH--- 331 (386)
T ss_dssp SSCHHHHHTTEEECSSSCEEEETTTT---EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---------EEE---
T ss_pred ccccccccccccCCCcceeeECCCCC---eEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE---------CCC---
Confidence 111122234578899988 7776643 2579999998876533200 000
Q ss_pred ccccccccceeeeccCCCcccc-EEEEEEe-CCcEEEEEE
Q 019349 282 EVLDPADHHVLRNAFPAGVKRA-SVSVITY-NGYFVEYIF 319 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~-dg~v~~~~~ 319 (342)
..| .+.+.++++ .|++.+. +|.|.+++.
T Consensus 332 ~~~----------~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 332 EID----------SINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EEC----------EEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred Ccc----------eEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 111 222344444 6777665 899998864
No 218
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=1.4e-08 Score=100.00 Aligned_cols=234 Identities=12% Similarity=0.024 Sum_probs=141.7
Q ss_pred cCCCCEEEEEc-CCc---EEEEeC--C---CCc--EEEEE----eeC--CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 16 NQDNSGFALST-KDG---FKIFDS--S---TGR--LCYER----AVG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 16 s~d~~~la~g~-~~g---~~v~d~--~---~~~--~~~~~----~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
+|||++++-.. +.+ ..+|.. . .++ .++.. ..+ .+....+.++++.+++..... .....+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~--G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG--GSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET--TCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC--CCceEEEE
Confidence 38999877543 333 356643 3 332 22111 112 345567888888888775310 01125799
Q ss_pred EEECCCCcEEEEEecCCceEEEEEcCC-eEEEEE-CC--------------eEEEEECCCCcee--eEEeCCCCCceEEE
Q 019349 79 LFNTTTGTALRELNFLTSILAVRLNKK-RLVIVL-RE--------------KTYIYDANTLAIL--DTIDTVPNLKGLCA 140 (342)
Q Consensus 79 iwd~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~~-d~--------------~i~i~d~~~~~~~--~~~~~~~~~~~~~~ 140 (342)
+||+.+++.+........+..+.|+++ .++... ++ .|++|++.+++.. ..+....++.....
T Consensus 193 v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 193 FVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp EEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred EEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999999987654211112356788887 334443 32 4999999877532 22333333334667
Q ss_pred EeeCCCccEEEEeCCC---CccEEEEEEccCC--ceeEEEecccCCeeEEEECCCCCEEEEEeCCCc---EEEEEEcCCC
Q 019349 141 FSPSLNACFLAVPAST---TKGSVLVYNVMEL--HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGT---IIRVFLVSEA 212 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~---~~g~i~iwd~~~~--~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~---~irlwd~~~~ 212 (342)
+.++||+.+|++.... ....|.+||+.++ ++...+..+...+... ++|+|+.|+..+.++. -|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 7888999888876531 1348999999887 3145566666555555 3589999988876432 2468999875
Q ss_pred -eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 213 -TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 213 -~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
.....+..+ ....+.+++|+ ++. ++++...|+..+||.++
T Consensus 352 ~~~~~~l~~~-~~~~l~~~~~~-~~~---lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 352 TPRFDTVVPE-SKDNLESVGIA-GNR---LFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEEEEECC-CSSEEEEEEEE-BTE---EEEEEEETTEEEEEEEE
T ss_pred ccccEEEecC-CCCeEEEEEEE-CCE---EEEEEEECCEEEEEEEe
Confidence 233333332 23347778887 455 78888899988887654
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=7.1e-09 Score=92.46 Aligned_cols=240 Identities=10% Similarity=0.035 Sum_probs=144.6
Q ss_pred CCeEEEEEcCCCCEEEEEc--CCc-EEEEeCCCCcEEEE--------EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCe
Q 019349 8 YPVFFVSFNQDNSGFALST--KDG-FKIFDSSTGRLCYE--------RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~--~~g-~~v~d~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (342)
..+..++++++|+.+++.. .++ .+||.++++++..- .+......+.+..+. .+.++..+. +...+.+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~-~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGN-QSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHH-HHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCC-CcCCCCe
Confidence 4678999999999888753 223 46666555554310 011233444554443 344443210 0001468
Q ss_pred EEEEECCCCcEEEEEecCC-------ceEEEEEcCC--eEEEEE-----CCeEEEEECCCCceeeEEeCCCC--------
Q 019349 77 LCLFNTTTGTALRELNFLT-------SILAVRLNKK--RLVIVL-----REKTYIYDANTLAILDTIDTVPN-------- 134 (342)
Q Consensus 77 i~iwd~~~~~~~~~~~~~~-------~v~~i~~~~~--~~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~-------- 134 (342)
|.+||+.+++.+..+.++. .+.+++++++ .++++. ++.|.+||+.+++..+.+..+..
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999999999887776542 3578888853 444543 35899999988876555432100
Q ss_pred -------------------CceEEEEeeCCCccEEEEeCCCCccEEEEEEcc---CCc-----eeE--EEecccCCeeEE
Q 019349 135 -------------------LKGLCAFSPSLNACFLAVPASTTKGSVLVYNVM---ELH-----SHC--EIDAHQAPLAAI 185 (342)
Q Consensus 135 -------------------~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~---~~~-----~~~--~~~~h~~~v~~i 185 (342)
......++.++++..|.++.. ....+..++.. .+. ... ...++......|
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM-HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES-SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC-CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 012456777788877776653 23466666542 110 000 122344556789
Q ss_pred EECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEe
Q 019349 186 VLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 255 (342)
Q Consensus 186 ~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd 255 (342)
+++++|+++++...+++ |.+||..+|+..... .........+++|.++++ ++++.+..+.+.+|.
T Consensus 254 a~d~~G~l~va~~~~~~-V~~~d~~~G~~~~~~-~~~~~~~p~~va~~~~g~---l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSA-IGVITSADRAYKLLV-TDEKLSWTDSFNFGSDGY---LYFDCNQLHHSAPLN 318 (343)
T ss_dssp EECTTCCEEEEEGGGTE-EEEEETTTTEEEEEE-ECGGGSCEEEEEECTTSC---EEEEECCGGGSGGGB
T ss_pred EECCCCCEEEEccCCCe-EEEEECCCCCEEEEE-ECCceecCCeeEECCCCc---EEEEeCccccccccc
Confidence 99999999999888887 579998667643222 211123478999999988 777777655554443
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=5.9e-09 Score=101.44 Aligned_cols=191 Identities=16% Similarity=0.090 Sum_probs=119.8
Q ss_pred CCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCE-----------EEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGAF-----------SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 19 ~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
+..|.+++.++ +.-+|..+|+++.+.....- ...........+.+.+ .++.|..+|.++|+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~-------~dg~l~alD~~tG~ 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA-------WDGRLIALDAATGK 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc-------CCCEEEEEECCCCC
Confidence 33455555544 68889999988876543210 0000111234444443 37899999999999
Q ss_pred EEEEEecC------CceE-EEEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCCCCc----------------
Q 019349 87 ALRELNFL------TSIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLK---------------- 136 (342)
Q Consensus 87 ~~~~~~~~------~~v~-~i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~---------------- 136 (342)
.+.++... ..+. ...+..+.+++.. ++.|+.||..+++.+..+.......
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred EEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 99988764 1221 1223455555544 4789999999999998886543220
Q ss_pred -----------e---EEEEeeCCCccEEEEeCCCCcc-------------------EEEEEEccCCceeEEEec--cc--
Q 019349 137 -----------G---LCAFSPSLNACFLAVPASTTKG-------------------SVLVYNVMELHSHCEIDA--HQ-- 179 (342)
Q Consensus 137 -----------~---~~~~~~~~~~~~l~~~~~~~~g-------------------~i~iwd~~~~~~~~~~~~--h~-- 179 (342)
+ ...++.++++..+.++.. ++ .|..+|..+++.+-.++. |.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~--~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTG--NGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECC--CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECC--CCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 0 012334444555555542 32 599999999998866653 31
Q ss_pred -----CCeeEEEECCCC---CEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 180 -----APLAAIVLSSNG---MYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 180 -----~~v~~i~~s~dg---~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
.....+....+| ..|+.++.+|.+ .++|..+|+.+..+.
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l-~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNGFF-FVLDRTNGKFISAKN 354 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTSEE-EEEETTTCCEEEEEE
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCCEE-EEEECCCCCEecccc
Confidence 122333444477 689999999975 799999999987764
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.12 E-value=2.6e-08 Score=96.89 Aligned_cols=235 Identities=9% Similarity=0.069 Sum_probs=149.4
Q ss_pred CCCEEEEEcCCc-EEEEeCCCCcEEEEEeeC-C------EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEE
Q 019349 18 DNSGFALSTKDG-FKIFDSSTGRLCYERAVG-A------FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALR 89 (342)
Q Consensus 18 d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~ 89 (342)
++..|++++.++ +..+|..+|+++.+...+ . +...-.. ..+.+.+.+.+.. ...++.|..+|.++|+.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAE-YGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTT-TCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccc-cCCCCEEEEEECCCCcEEE
Confidence 355677777665 689999999988765543 1 1100001 1233433332110 0126899999999999998
Q ss_pred EEecCCce---------------------------------EEEEEcC--CeEEEEECC--------------------e
Q 019349 90 ELNFLTSI---------------------------------LAVRLNK--KRLVIVLRE--------------------K 114 (342)
Q Consensus 90 ~~~~~~~v---------------------------------~~i~~~~--~~~~~~~d~--------------------~ 114 (342)
.+...... ..+.+++ +.+++...+ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 87642211 1344543 344444422 4
Q ss_pred EEEEECCCCceeeEEeCCCCC-------ceEEEEeeCCCc---cEEEEeCCCCccEEEEEEccCCceeEEEeccc-----
Q 019349 115 TYIYDANTLAILDTIDTVPNL-------KGLCAFSPSLNA---CFLAVPASTTKGSVLVYNVMELHSHCEIDAHQ----- 179 (342)
Q Consensus 115 i~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~----- 179 (342)
|..+|..+++.+..++...+. .....+....++ ..++.+. .+|.|.++|..+++.+..++...
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP--KNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC--CCCEEEEEECCCCCEeccccccccCccc
Confidence 999999999999888764331 112222221234 4566555 68999999999999876654211
Q ss_pred ------CCe------------------------eEEEECCCCCEEEEEeCC-----------------------------
Q 019349 180 ------APL------------------------AAIVLSSNGMYIATASEQ----------------------------- 200 (342)
Q Consensus 180 ------~~v------------------------~~i~~s~dg~~lat~s~d----------------------------- 200 (342)
.++ ..++|+|++.++++.+.+
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 111 157899998888876542
Q ss_pred --------------CcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCC
Q 019349 201 --------------GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQR 263 (342)
Q Consensus 201 --------------g~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 263 (342)
|. +..||+.+|+.+.++..+ ..+.+..++.++. +++.++.||.+++||+++++...
T Consensus 443 g~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~~~g~---~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGR-LLAWDPVAQKAAWSVEHV---SPWNGGTLTTAGN---VVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp CEEECSSCCCSCCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTT---EEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccccCCCCCccE-EEEEeCCCCcEEeecCCC---CCCcCcceEeCCC---EEEEECCCCcEEEEECCCCceee
Confidence 55 579999999998877533 2244455677777 88899999999999999887643
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.10 E-value=5.4e-07 Score=81.82 Aligned_cols=193 Identities=8% Similarity=0.064 Sum_probs=123.9
Q ss_pred CCeEEEEcCCCCCCCCCCeEEEEECCCC----cEEEEEe---c----C-CceEEEEEcCCeEEEEE--C------CeEEE
Q 019349 58 SSLLAIVGAGEQPSLSPRRLCLFNTTTG----TALRELN---F----L-TSILAVRLNKKRLVIVL--R------EKTYI 117 (342)
Q Consensus 58 ~~~~~~~~~g~~~~~~d~~i~iwd~~~~----~~~~~~~---~----~-~~v~~i~~~~~~~~~~~--d------~~i~i 117 (342)
.+++.+.+. .+++|.+.|+.+. +.+..++ . . .....+.+.++++++.. + +.+.+
T Consensus 95 r~~l~v~~l------~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 95 RRFLIVPGL------RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILM 168 (462)
T ss_dssp SCEEEEEBT------TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEE
T ss_pred CCEEEEccC------CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEE
Confidence 345555554 5889999999765 5555563 1 1 13456777888866654 3 58999
Q ss_pred EECCCCceeeEEeCCCCCce-EEEEeeCCCccEEEEeCC-----------------CCccEEEEEEccCCceeEEEecc-
Q 019349 118 YDANTLAILDTIDTVPNLKG-LCAFSPSLNACFLAVPAS-----------------TTKGSVLVYNVMELHSHCEIDAH- 178 (342)
Q Consensus 118 ~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~-----------------~~~g~i~iwd~~~~~~~~~~~~h- 178 (342)
+|..+.+.+.++.....+.. -..+-++|++..++++.- ....+|.+||+.+++.+.++..-
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 99999999998865433321 222444566667777630 02588999999998888877642
Q ss_pred -cCCeeEEEE--CCCCCEEEEEeC-----CCcEEEEEEcCCCee--EEE--eccCc--C------------ceeEEEEEE
Q 019349 179 -QAPLAAIVL--SSNGMYIATASE-----QGTIIRVFLVSEATK--SYS--FRRGT--Y------------PSTIFSLSF 232 (342)
Q Consensus 179 -~~~v~~i~~--s~dg~~lat~s~-----dg~~irlwd~~~~~~--~~~--~~~~~--~------------~~~v~~l~f 232 (342)
......|.| +|+|+++..+++ ....|-+|....|+. +.. +.... . ......|.+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 233455656 999999888886 443344655544431 111 11100 0 123677899
Q ss_pred ecCCCcccEEEEEeC-CCcEEEEecCCC
Q 019349 233 GQSMQFQDILVATSS-SGSLHVFSPGFA 259 (342)
Q Consensus 233 s~d~~~~~~l~~~s~-dg~i~vwd~~~~ 259 (342)
|||++ +|.++.. .++|.+||+...
T Consensus 329 S~DGr---fLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 329 SLDDK---FLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CTTSC---EEEEEETTTTEEEEEECSST
T ss_pred CCCCC---EEEEEeCCCCEEEEEEecCC
Confidence 99999 6766654 689999999744
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.10 E-value=7.4e-08 Score=84.24 Aligned_cols=220 Identities=10% Similarity=0.012 Sum_probs=134.0
Q ss_pred CCeEEEEEcCCCCE-EEEEcCC-cEEEEeCCCCcE-EEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 8 YPVFFVSFNQDNSG-FALSTKD-GFKIFDSSTGRL-CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 8 ~~V~~l~fs~d~~~-la~g~~~-g~~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
.-.....|+|+|+. +.++..+ .+..|+.. ++. .+.........+.+..+++.+ ++.. ..+.|.+||..
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~-v~~~------~~~~v~~~~~~- 115 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLV-HCEH------GRRAITRSDAD- 115 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEE-EEET------TTTEEEEECTT-
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEE-EEEC------CCCEEEEECCC-
Confidence 34568899999994 4566554 47888874 443 333333445556666666644 3332 25789999975
Q ss_pred CcEEEEEe-cC----CceEEEEEcCCeEEEEEC--------------------CeEEEEECCCCceeeEEeCCCCCceEE
Q 019349 85 GTALRELN-FL----TSILAVRLNKKRLVIVLR--------------------EKTYIYDANTLAILDTIDTVPNLKGLC 139 (342)
Q Consensus 85 ~~~~~~~~-~~----~~v~~i~~~~~~~~~~~d--------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (342)
++...... .. ..+.++.+++++.+.++| +.|+.||..+++..... . .....
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~---~~~p~ 191 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D---LDHPN 191 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E---ESSEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c---CCCCc
Confidence 55332221 11 245678888887666642 35777777666543322 1 11234
Q ss_pred EEeeCCCccEEEEeCCCC----ccEEEEEEccCCce--eEEE-ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 019349 140 AFSPSLNACFLAVPASTT----KGSVLVYNVMELHS--HCEI-DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 212 (342)
Q Consensus 140 ~~~~~~~~~~l~~~~~~~----~g~i~iwd~~~~~~--~~~~-~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~ 212 (342)
.++++|++..|.++.... .+.|.+||+..... ...+ .........|+++++|++.++ ..+| |.+|+. ++
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~g--v~~~~~-~g 267 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGTG--VCVFDS-DG 267 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSSE--EEEECT-TS
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCCc--EEEECC-CC
Confidence 566778887666665311 26899999876541 1111 112344567899999995554 4554 469998 57
Q ss_pred eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCc
Q 019349 213 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGS 250 (342)
Q Consensus 213 ~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~ 250 (342)
+.+..+... ..+.+++|+|+++ .|..++.++.
T Consensus 268 ~~~~~~~~~---~~~~~~~f~~d~~---~L~it~~~~l 299 (305)
T 3dr2_A 268 QLLGHIPTP---GTASNCTFDQAQQ---RLFITGGPCL 299 (305)
T ss_dssp CEEEEEECS---SCCCEEEECTTSC---EEEEEETTEE
T ss_pred CEEEEEECC---CceeEEEEeCCCC---EEEEEcCCeE
Confidence 777766533 2478899999987 7887777643
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.10 E-value=1.5e-09 Score=97.53 Aligned_cols=228 Identities=14% Similarity=0.043 Sum_probs=142.7
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEeCCCCcEEEEEeeC---------CEEEEEEcCCCCeEEEEcCCCCCC
Q 019349 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (342)
Q Consensus 12 ~l~fs~d~~~la~g~-----------~~g~~v~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (342)
.+.|+||+++|.++. ++.+.+||+.+++.+.+...+ .-..+.+.++++++.++..+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~---- 144 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG---- 144 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS----
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC----
Confidence 799999999988875 244799999999887765432 12245667777777766531
Q ss_pred CCCCeEEE--EECCCCcEEEEEecCCceEEEEEcCCeEEEEE--CCeEEEEECCC-----Cceee----EEeCCCCCceE
Q 019349 72 LSPRRLCL--FNTTTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANT-----LAILD----TIDTVPNLKGL 138 (342)
Q Consensus 72 ~~d~~i~i--wd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~--d~~i~i~d~~~-----~~~~~----~~~~~~~~~~~ 138 (342)
..+.+.+ +|+.+ +.++..+..+ .+...+...+++. |+++.+.++.+ ++... .+.....+.
T Consensus 145 -~~~~v~V~~iD~~t---v~~i~v~~~~-~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-- 217 (368)
T 1mda_H 145 -SSAAAGLSVPGASD---DQLTKSASCF-HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-- 217 (368)
T ss_dssp -SSCEEEEEETTTEE---EEEEECSSCC-CCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--
T ss_pred -CCCeEEEEEEchhh---ceEEECCCce-EEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--
Confidence 2467888 99877 5555443321 1223333333333 77788888876 33221 111122222
Q ss_pred EEEeeCCCccEEEEeCCCCccEEEEEEccCCc--eeEEEec-------c---cCCeeEEEECCCCCEEEEEeC-C-----
Q 019349 139 CAFSPSLNACFLAVPASTTKGSVLVYNVMELH--SHCEIDA-------H---QAPLAAIVLSSNGMYIATASE-Q----- 200 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~-------h---~~~v~~i~~s~dg~~lat~s~-d----- 200 (342)
+ .+++..+++.. . +.|.+.|+.... .+..+.. + ......++|+|||+.|..+.. .
T Consensus 218 -~---~~~~~~~~~vs--~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 218 -Q---ANYPGMLVWAV--A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp -E---ETTTTEEEECB--S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred -c---cccCCEEEEEc--C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 2 33344555555 4 789999986532 2222211 1 112223789999998886543 2
Q ss_pred ---CcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCCCCCCC
Q 019349 201 ---GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAINQR 263 (342)
Q Consensus 201 ---g~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~~~~ 263 (342)
+.+. ++|+.+++.+.++..+ .....|+|+||++ .++++.. .+++|.|+|+++.+..+
T Consensus 291 ~~~~~~~-ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~--~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 291 AAAENTS-SVTASVGQTSGPISNG---HDSDAIIAAQDGA--SDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp SCEEEEE-EEESSSCCEEECCEEE---EEECEEEECCSSS--CEEEEEETTTTEEEEEESSSCEEEE
T ss_pred ccCCCEE-EEECCCCeEEEEEECC---CCcceEEECCCCC--EEEEEccCCCCeEEEEECCCCcEEE
Confidence 2444 9999999998887543 2478899999997 1455555 58999999999877543
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.09 E-value=1.8e-08 Score=98.24 Aligned_cols=190 Identities=17% Similarity=0.106 Sum_probs=116.3
Q ss_pred CCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEE-----------EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGAFS-----------IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 19 ~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
+..|.+++.++ +.-+|..+|+++.+.....-. ..........+.+.+ .++.|..+|.++|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~-------~dg~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV-------LDGRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc-------cCCEEEEEECCCCC
Confidence 44566666554 688999999988765432100 000011233444443 38899999999999
Q ss_pred EEEEEecC-C-----ceE-EEEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCC-CCc---------------
Q 019349 87 ALRELNFL-T-----SIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVP-NLK--------------- 136 (342)
Q Consensus 87 ~~~~~~~~-~-----~v~-~i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~-~~~--------------- 136 (342)
.+.+.... . .+. +-.+..+.+++.. ++.|+.||..+++.+..+.... .+.
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 99887653 1 111 1122344454443 4789999999999988876421 110
Q ss_pred ----------e---EEEEeeCCCccEEEEeCCCCcc-------------------EEEEEEccCCceeEEEec--cc---
Q 019349 137 ----------G---LCAFSPSLNACFLAVPASTTKG-------------------SVLVYNVMELHSHCEIDA--HQ--- 179 (342)
Q Consensus 137 ----------~---~~~~~~~~~~~~l~~~~~~~~g-------------------~i~iwd~~~~~~~~~~~~--h~--- 179 (342)
+ ....+.+++...+.++. .++ .|..+|..+++.+-.++. |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~--~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGV--GNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEEC--CCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeC--CCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 0 01234445555666554 344 499999999998877654 32
Q ss_pred ----CCeeEEEECCCCC---EEEEEeCCCcEEEEEEcCCCeeEEEe
Q 019349 180 ----APLAAIVLSSNGM---YIATASEQGTIIRVFLVSEATKSYSF 218 (342)
Q Consensus 180 ----~~v~~i~~s~dg~---~lat~s~dg~~irlwd~~~~~~~~~~ 218 (342)
.++....+..+|+ .|+.++.+|.+ +++|..+|+.+...
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l-~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGFF-YVIDRATGELLSAK 345 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEE-EEEETTTCCEEEEE
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCeE-EEEECCCCCEeccc
Confidence 2222223333665 78899999975 79999999987543
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=2.1e-07 Score=79.31 Aligned_cols=176 Identities=13% Similarity=0.050 Sum_probs=129.9
Q ss_pred CCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccE
Q 019349 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
++.|.+.|+.+++.+.++..+. ....+++.++.++++. ++.+.++|..+++.+.++... .+.+ ..+++++ ..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g-~glt~Dg--~~ 118 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDG-WGLATDG--KI 118 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSSC-CEEEECS--SS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCCe-EEEEECC--CE
Confidence 6899999999999999887654 3457788888888888 789999999999999999765 2333 3466654 34
Q ss_pred EEEeCCCCccEEEEEEccCCceeEEEeccc--C---CeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc-C
Q 019349 150 LAVPASTTKGSVLVYNVMELHSHCEIDAHQ--A---PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-Y 223 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~--~---~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~-~ 223 (342)
+..+. .++.|.++|..+.+.+.+++--. . .++.+.|. +|...+....++. |.+.|..+++.+..+..+. .
T Consensus 119 l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~-V~vID~~tg~V~~~I~~~g~~ 194 (266)
T 2iwa_A 119 LYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC-IARISAKDGTLLGWILLPNLR 194 (266)
T ss_dssp EEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE-EEEEETTTCCEEEEEECHHHH
T ss_pred EEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe-EEEEECCCCcEEEEEECCCcc
Confidence 44444 36899999999998888776321 2 36788888 7755555444555 5799999999988885421 0
Q ss_pred ----------ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 224 ----------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 224 ----------~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
....+.|+|+|+++ .+++++...+++.+.++...
T Consensus 195 ~~~~~~~~~~~~v~nGIa~~~~~~--~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 195 KKLIDEGFRDIDVLNGIAWDQENK--RIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHHTTCTTCCCEEEEEEETTTT--EEEEEETTCSEEEEEEEEEC
T ss_pred cccccccccccCceEEEEEcCCCC--EEEEECCCCCeEEEEEEecc
Confidence 12468999999986 26666667889999998654
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.08 E-value=2.7e-07 Score=78.65 Aligned_cols=191 Identities=10% Similarity=0.003 Sum_probs=130.1
Q ss_pred eEEEEEcCCCCEEEEEc---CCcEEEEeCCCCcEEEEEeeCC--EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 10 VFFVSFNQDNSGFALST---KDGFKIFDSSTGRLCYERAVGA--FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~---~~g~~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
...++|++|+.+.++.+ ++.++++|+.+++.+.....+. .. ..+...++.+..+.. .++.+.++|..+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fg-eGi~~~g~~lyv~t~------~~~~v~viD~~t 95 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFG-EGLTLLNEKLYQVVW------LKNIGFIYDRRT 95 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCE-EEEEEETTEEEEEET------TCSEEEEEETTT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcce-EEEEEeCCEEEEEEe------cCCEEEEEECCC
Confidence 57899999875444433 2458999999999877654322 21 122233556666654 489999999999
Q ss_pred CcEEEEEecC-CceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCc---eEEEEeeCCCccEEEEeCCCCcc
Q 019349 85 GTALRELNFL-TSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLK---GLCAFSPSLNACFLAVPASTTKG 159 (342)
Q Consensus 85 ~~~~~~~~~~-~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~g 159 (342)
.+.+.++... ..-..++.....++++. ++++.++|..+.+.+..+....++. ....+.+. ++...+... .++
T Consensus 96 ~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~--~~~ 172 (266)
T 2iwa_A 96 LSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW--QTD 172 (266)
T ss_dssp TEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--TSS
T ss_pred CcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC--CCC
Confidence 9999998766 44456777777777665 6799999999999988887543321 12333443 454444443 468
Q ss_pred EEEEEEccCCceeEEEeccc-------------CCeeEEEECCCCCEEEEEe-CCCcEEEEEEcCC
Q 019349 160 SVLVYNVMELHSHCEIDAHQ-------------APLAAIVLSSNGMYIATAS-EQGTIIRVFLVSE 211 (342)
Q Consensus 160 ~i~iwd~~~~~~~~~~~~h~-------------~~v~~i~~s~dg~~lat~s-~dg~~irlwd~~~ 211 (342)
.|.+.|..+++.+..+.... ...+.|+|+|+++.|..++ ..++ +.+.++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEec
Confidence 99999999999988886321 3568999999987655554 4454 45666644
No 228
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=5.4e-08 Score=82.15 Aligned_cols=172 Identities=7% Similarity=-0.037 Sum_probs=123.5
Q ss_pred CCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCce--EEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeC
Q 019349 56 YSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDT 131 (342)
Q Consensus 56 ~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~ 131 (342)
++.+.+..+++ .++.|+.+|+++++.+.++ .+... ..+++.++.++++. ++.+.+||..+++.+.++..
T Consensus 62 ~~~~~Ly~stG------~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 62 FHQGHFFESTG------HQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EETTEEEEEET------TTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred EECCEEEEEcC------CCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 34556655555 4677999999999999888 76654 45888899999988 88999999999999999987
Q ss_pred CCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEec--ccC---CeeEEEECCCCCEEEEEeCCCcEEEE
Q 019349 132 VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDA--HQA---PLAAIVLSSNGMYIATASEQGTIIRV 206 (342)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~--h~~---~v~~i~~s~dg~~lat~s~dg~~irl 206 (342)
.... .+++++ +..|..+. .++.|.++|..+.+.+.+++. +.. .++.+.|. +|+..|....++. |.+
T Consensus 135 ~~eG---wGLt~D--g~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~-I~v 205 (268)
T 3nok_A 135 SGEG---WGLCYW--NGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD-VLE 205 (268)
T ss_dssp SSCC---CCEEEE--TTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE-EEE
T ss_pred CCce---eEEecC--CCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe-EEE
Confidence 5443 334444 34555554 368999999999998888764 222 35667776 7765544434554 679
Q ss_pred EEcCCCeeEEEeccCc-----------CceeEEEEEEecCCCcccEEEEEe
Q 019349 207 FLVSEATKSYSFRRGT-----------YPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 207 wd~~~~~~~~~~~~~~-----------~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
.|.++|+.+..+.... .....+.||++|+++ .|.+++
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~---rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG---RIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC---CEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC---EEEEeC
Confidence 9999999888775321 113478999999876 455444
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.04 E-value=4.4e-07 Score=82.39 Aligned_cols=226 Identities=8% Similarity=0.028 Sum_probs=137.5
Q ss_pred c--CCCCEEEEEcCC--cEEEEeCCCC----cEEEEEe------eCCE---EEEEEcCCCCeEEEEcCCCCCCCCCCeEE
Q 019349 16 N--QDNSGFALSTKD--GFKIFDSSTG----RLCYERA------VGAF---SIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 16 s--~d~~~la~g~~~--g~~v~d~~~~----~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~g~~~~~~d~~i~ 78 (342)
+ +++++|.+.+.. .+.|+|+.+. ++....+ ..+. -.+.+.+++ .++.+.++..+ -..+.|.
T Consensus 90 ~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v~ 167 (462)
T 2ece_A 90 KPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG-EGPGGIL 167 (462)
T ss_dssp CTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS-CSCCEEE
T ss_pred CCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC-CCCCeEE
Confidence 7 889998876543 3789998644 3333221 0011 123444555 33322221111 1247899
Q ss_pred EEECCCCcEEEEEecCC----ceEEEEEcCCe-EEEEE---------------------CCeEEEEECCCCceeeEEeCC
Q 019349 79 LFNTTTGTALRELNFLT----SILAVRLNKKR-LVIVL---------------------REKTYIYDANTLAILDTIDTV 132 (342)
Q Consensus 79 iwd~~~~~~~~~~~~~~----~v~~i~~~~~~-~~~~~---------------------d~~i~i~d~~~~~~~~~~~~~ 132 (342)
+.|.++++.+.++.... --.++.+++++ .++.+ +++|.+||+.+++.+.++...
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 99999999999886432 23456666654 33333 479999999999888888775
Q ss_pred CCCceE--EEEeeCCCccEEEEeCC----CCccEEEEEEccCCc--eeEEE--ecc----------------cCCeeEEE
Q 019349 133 PNLKGL--CAFSPSLNACFLAVPAS----TTKGSVLVYNVMELH--SHCEI--DAH----------------QAPLAAIV 186 (342)
Q Consensus 133 ~~~~~~--~~~~~~~~~~~l~~~~~----~~~g~i~iwd~~~~~--~~~~~--~~h----------------~~~v~~i~ 186 (342)
...... +.+.++|++.++.+... +.+++|.+|....++ ..+.+ ... ......|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 321222 23555777766554431 025788877655442 11111 110 13468899
Q ss_pred ECCCCCEEEEEeCCCcEEEEEEcCC---CeeEEEeccCcC---------c---eeEEEEEEecCCCcccEEEEEe
Q 019349 187 LSSNGMYIATASEQGTIIRVFLVSE---ATKSYSFRRGTY---------P---STIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 187 ~s~dg~~lat~s~dg~~irlwd~~~---~~~~~~~~~~~~---------~---~~v~~l~fs~d~~~~~~l~~~s 246 (342)
+|+||++|..+......|.++|+.. .+.+..+..+.. . ..-..++++|||+ +|.++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk---~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR---RVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS---EEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCC---EEEEEc
Confidence 9999999999887655678999853 355555544311 0 0246789999999 888888
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.04 E-value=1.1e-06 Score=77.49 Aligned_cols=189 Identities=9% Similarity=-0.041 Sum_probs=120.9
Q ss_pred EEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe-EEEEECCeEEEEECCCCceeeEEeC
Q 019349 53 EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVLREKTYIYDANTLAILDTIDT 131 (342)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~d~~i~i~d~~~~~~~~~~~~ 131 (342)
.+..+.+.++++.. ..+.|..||..+++. ..+..+..+.++.++++. ++++..+.|++||..+++.......
T Consensus 55 ~~~~~~~~l~~~d~------~~~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 55 TFDPASGTAWWFNI------LERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEETTTTEEEEEEG------GGTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECS
T ss_pred eEeCCCCEEEEEEC------CCCEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeC
Confidence 44455556666654 367999999987754 345566788999987765 5555577899999988765432222
Q ss_pred CC--CCceEEEEeeCCCccEEEEeCCC----CccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe-CCCcEE
Q 019349 132 VP--NLKGLCAFSPSLNACFLAVPAST----TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS-EQGTII 204 (342)
Q Consensus 132 ~~--~~~~~~~~~~~~~~~~l~~~~~~----~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s-~dg~~i 204 (342)
.. ....+..+..++++.+.+..... ..+.|..+| +++. ..+..+....+.++|+|||+.|+.+. .++. |
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~-I 203 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNR-L 203 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCE-E
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCE-E
Confidence 11 12345677778888766543210 125566666 4443 33333445678999999998776654 4455 5
Q ss_pred EEEEcC--CC-e-----eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 205 RVFLVS--EA-T-----KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 205 rlwd~~--~~-~-----~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
.+||+. +| + .+..+.. .......+++.+++. ++++...++.|.+||.+
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~--~~~~p~gi~~d~~G~---lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTG--IKGGMDGSVCDAEGH---IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTT--SSSEEEEEEECTTSC---EEEEEETTTEEEEECTT
T ss_pred EEEEcccccCCcccCceEEEECCC--CCCCCCeeEECCCCC---EEEEEeCCCEEEEECCC
Confidence 799986 56 3 1222221 123467899999998 77777677899999873
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=6.5e-11 Score=106.90 Aligned_cols=171 Identities=11% Similarity=0.029 Sum_probs=91.8
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcCCe-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCC-CccE
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-NACF 149 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 149 (342)
++.|+.||..+|+.+.++.. ..+.+..+..+. ++++. |+.++.||..+++.+..+..+.. .....++.- .+..
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~--~~~~~sp~~~~~~~ 94 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP--ELVQASPCRSSDGI 94 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH--HHHTTCSCC-----
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc--cccccCceEecCCE
Confidence 78999999999999998877 544443333333 44443 88999999998877665533211 000001110 1224
Q ss_pred EEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEE
Q 019349 150 LAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFS 229 (342)
Q Consensus 150 l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~ 229 (342)
+++++ .+|.|..||..+++.+..+..+. .+.++|++..|++++.|+.+ +.||.++|+.+.++... ....
T Consensus 95 v~~g~--~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v-~a~d~~tG~~~W~~~~~----~~~~ 163 (369)
T 2hz6_A 95 LYMGK--KQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTI-TMYDTKTRELRWNATYF----DYAA 163 (369)
T ss_dssp CCCCE--EEEEEEEECCC--------------------------EEEEEEEEEE-ECCCSSSSSCCCEEEEE----EECC
T ss_pred EEEEe--CCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEE-EEEECCCCCEEEeEecc----cccC
Confidence 44444 58999999999999887776554 24567788999999999875 79999999887665421 1223
Q ss_pred EEEecCC---CcccEEEEEeCCCcEEEEecCCCCC
Q 019349 230 LSFGQSM---QFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 230 l~fs~d~---~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.+++++. . .+++++.||.|+.||.++++.
T Consensus 164 ~~~~~~~~~~~---~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 164 SLPEDDVDYKM---SHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp BCCCCCTTCCC---CEEEEETSCEEEEECTTTCCE
T ss_pred ccccCCccccc---eEEEECCCCEEEEEECCCCcE
Confidence 3444432 3 577889999999999887653
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.03 E-value=1.5e-07 Score=79.49 Aligned_cols=161 Identities=9% Similarity=0.084 Sum_probs=118.6
Q ss_pred CeEEEEECCCCcEEEEEecCCce--EEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEE
Q 019349 75 RRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (342)
..|+.+|+++++.+.++..+... ..+.+..+.++++. ++.+.+||..+.+.+.++......- +++++ +..|
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~---glt~d--g~~L 139 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW---GLTHN--DQYL 139 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC---CEEEC--SSCE
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce---EEecC--CCEE
Confidence 48999999999999999887655 55788889999988 8899999999999999998754432 34444 3455
Q ss_pred EEeCCCCccEEEEEEccCCceeEEEecc--c---CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc---
Q 019349 151 AVPASTTKGSVLVYNVMELHSHCEIDAH--Q---APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT--- 222 (342)
Q Consensus 151 ~~~~~~~~g~i~iwd~~~~~~~~~~~~h--~---~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~--- 222 (342)
..+. .++.|.++|..+.+.+.+++.. . ..++.+.+. +|+..|..-.++. |.+.|.++|+.+..+....
T Consensus 140 ~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~-I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 140 IMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK-IVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp EECC--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE-EEEECTTTCBEEEEEECTTGGG
T ss_pred EEEC--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCe-EEEEECCCCcEEEEEECCcCcc
Confidence 5544 3578999999999988887642 2 335567776 6765544444555 5799999999888775321
Q ss_pred -------CceeEEEEEEecCCCcccEEEEEeC
Q 019349 223 -------YPSTIFSLSFGQSMQFQDILVATSS 247 (342)
Q Consensus 223 -------~~~~v~~l~fs~d~~~~~~l~~~s~ 247 (342)
.....+.|||+|+++ .|.+++.
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~---~lfVTGK 244 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHH---RLFVTGK 244 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTT---EEEEEET
T ss_pred ccccccCcCCceEEEEEcCCCC---EEEEECC
Confidence 112478999999987 6666664
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.99 E-value=4.6e-07 Score=75.74 Aligned_cols=175 Identities=13% Similarity=0.079 Sum_probs=123.4
Q ss_pred CCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCce--EEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCC
Q 019349 57 SSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTV 132 (342)
Q Consensus 57 ~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~ 132 (342)
+.+.+...++. .....|+.+|+++++.+.++..+... ..+++..+.++++. ++.+.+||..+.+.+.++...
T Consensus 29 ~~~~LyestG~----~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~ 104 (243)
T 3mbr_X 29 LRGHLYESTGE----TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP 104 (243)
T ss_dssp ETTEEEEEECC----TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS
T ss_pred ECCEEEEECCC----CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC
Confidence 34555444442 12468999999999999999887654 56677888998888 889999999999999999875
Q ss_pred CCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecc--c---CCeeEEEECCCCCEEEEEeCCCcEEEEE
Q 019349 133 PNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAH--Q---APLAAIVLSSNGMYIATASEQGTIIRVF 207 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h--~---~~v~~i~~s~dg~~lat~s~dg~~irlw 207 (342)
... .++++++ ..|..+. .++.|.++|..+.+.+.+++-. . ..++.+.+. +|+..|..-.+.. |.+.
T Consensus 105 ~~G---wglt~dg--~~L~vSd--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~-I~vI 175 (243)
T 3mbr_X 105 GEG---WALTSDD--SHLYMSD--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR-IARI 175 (243)
T ss_dssp SCC---CEEEECS--SCEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE-EEEE
T ss_pred CCc---eEEeeCC--CEEEEEC--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe-EEEE
Confidence 543 3445443 3444444 3688999999999988877642 2 245666665 6665544434544 5799
Q ss_pred EcCCCeeEEEeccCc-----------CceeEEEEEEecCCCcccEEEEEeC
Q 019349 208 LVSEATKSYSFRRGT-----------YPSTIFSLSFGQSMQFQDILVATSS 247 (342)
Q Consensus 208 d~~~~~~~~~~~~~~-----------~~~~v~~l~fs~d~~~~~~l~~~s~ 247 (342)
|.++|+.+..+.... .....+.||++|++. .|.+++.
T Consensus 176 Dp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~---~lfVTGK 223 (243)
T 3mbr_X 176 DPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD---RLFVTGK 223 (243)
T ss_dssp CTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT---EEEEEET
T ss_pred ECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC---EEEEECC
Confidence 999999888775321 112478999999887 6666653
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.95 E-value=5.5e-07 Score=87.76 Aligned_cols=233 Identities=10% Similarity=0.079 Sum_probs=143.3
Q ss_pred CCEEEEEcCCc-EEEEeCCCCcEEEEEeeC-------CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEE
Q 019349 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVG-------AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRE 90 (342)
Q Consensus 19 ~~~la~g~~~g-~~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~ 90 (342)
+..+++++.++ +..+|..+|+++...... .+...-... .+.+++...+.. ...++.|..||.++|+.+..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTT-TCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEE
Confidence 45677777666 689999999988665432 010000001 233333222100 01368999999999999988
Q ss_pred EecC-C-c------------------------------eEEEEEcC--CeEEEEE-CC-------------------eEE
Q 019349 91 LNFL-T-S------------------------------ILAVRLNK--KRLVIVL-RE-------------------KTY 116 (342)
Q Consensus 91 ~~~~-~-~------------------------------v~~i~~~~--~~~~~~~-d~-------------------~i~ 116 (342)
+... . + ...+.+++ +.+++.. ++ .|.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 7531 0 0 01345544 3444443 32 399
Q ss_pred EEECCCCceeeEEeCCCCC-------c--eEEEEeeCCC-ccEEEEeCCCCccEEEEEEccCCceeEEEeccc-C-----
Q 019349 117 IYDANTLAILDTIDTVPNL-------K--GLCAFSPSLN-ACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQ-A----- 180 (342)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~-~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~-~----- 180 (342)
.+|..+++.+..++...+. . .+..+...+. ...++.+. .+|.++++|..+++.+...+... .
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP--KNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC--CCCeEEEEECCCCCEecccccccccccccc
Confidence 9999999999888764321 1 1112222221 12455555 68999999999998874332110 0
Q ss_pred ---------------------------------CeeEEEECCCCCEEEEEeC----------------------------
Q 019349 181 ---------------------------------PLAAIVLSSNGMYIATASE---------------------------- 199 (342)
Q Consensus 181 ---------------------------------~v~~i~~s~dg~~lat~s~---------------------------- 199 (342)
.-..++|+|+..++++.+.
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0123789998888887643
Q ss_pred -----------------CCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCC
Q 019349 200 -----------------QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQ 262 (342)
Q Consensus 200 -----------------dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~ 262 (342)
+|+ ++.||+.+|+.+.++..+. .+..-.++..+. +++.++.||.|+.||.++++..
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg---lvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGK-LIAWDPVKQQAAWEVPYVT---IFNGGTLSTAGN---LVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEE-EEEEETTTTEEEEEEEESS---SCCCCEEEETTT---EEEEECTTSEEEEEETTTCCEE
T ss_pred cccCcccccCCCCCCCccee-EEEEECCCCCeEeEccCCC---CccCccceECCC---EEEEECCCCcEEEEECCCCccc
Confidence 255 5799999999988775432 233335666676 8999999999999999988763
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.93 E-value=3.4e-07 Score=77.27 Aligned_cols=182 Identities=10% Similarity=0.021 Sum_probs=125.2
Q ss_pred eEEEEEcCCCCEEEEEcCC---cEEEEeCCCCcEEEEEeeCC-EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC
Q 019349 10 VFFVSFNQDNSGFALSTKD---GFKIFDSSTGRLCYERAVGA-FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~~~---g~~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~ 85 (342)
...|.|+ ++.+..+.+.+ .++++|+.+++++....... .....+....+.+..+.. .++.+.++|..+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw------~~~~v~v~D~~t~ 117 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW------KNGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------SSSEEEEEETTTC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe------eCCEEEEEECccC
Confidence 4678898 66544444443 47999999999887655432 111122233556666654 5889999999999
Q ss_pred cEEEEEecCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCc---eEEEEeeCCCccEEEEeCCCCccEE
Q 019349 86 TALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLK---GLCAFSPSLNACFLAVPASTTKGSV 161 (342)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~g~i 161 (342)
+.+.++..+..-..++...+.++++. +++|.++|..+.+.+..+....+.. .+..+.+. ++...+..- .++.|
T Consensus 118 ~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w--~~~~I 194 (262)
T 3nol_A 118 RQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW--QTNKI 194 (262)
T ss_dssp CEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--TSSEE
T ss_pred cEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc--cCCeE
Confidence 99999988765567777777766665 5689999999999998887643221 22223333 454444443 46799
Q ss_pred EEEEccCCceeEEEecc------------cCCeeEEEECCCCCEEEEEeCCC
Q 019349 162 LVYNVMELHSHCEIDAH------------QAPLAAIVLSSNGMYIATASEQG 201 (342)
Q Consensus 162 ~iwd~~~~~~~~~~~~h------------~~~v~~i~~s~dg~~lat~s~dg 201 (342)
.+.|.++++.+..+... ..-.+.|+|+|+++.|...+..=
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 99999999988877532 13568999999988877776543
No 236
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.91 E-value=1.4e-06 Score=79.56 Aligned_cols=178 Identities=7% Similarity=-0.038 Sum_probs=106.8
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcCCe--EEEEE-CC--eEEEEECCCCceeeEE-eCCC-CCceEEEEeeCCC
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-RE--KTYIYDANTLAILDTI-DTVP-NLKGLCAFSPSLN 146 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~~-d~--~i~i~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~ 146 (342)
++.|++||..+++............ ++++++. ++++. ++ .|++++.........+ .... .......++.+|+
T Consensus 151 ~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 151 DPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp TTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred CCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 6899999998877665554433344 7787764 34443 23 8999998765443343 1111 1122334455663
Q ss_pred ccEEEEeCCCCccEEEEEEccCCceeEE----EecccCC--eeEEEECCC-CCEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 147 ACFLAVPASTTKGSVLVYNVMELHSHCE----IDAHQAP--LAAIVLSSN-GMYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~~~~~~~----~~~h~~~--v~~i~~s~d-g~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
...|.++. .++.|..||..++..... ..++... .+.|+|+|+ +.++++-...++ |+.|+... +. ..+.
T Consensus 230 ~g~lyv~d--~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~-I~~~~~~g-~~-~~~~ 304 (409)
T 3hrp_A 230 EEWLYFVD--SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS-VYKITPDG-EC-EWFC 304 (409)
T ss_dssp SSEEEEEC--TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE-EEEECTTC-CE-EEEE
T ss_pred CCeEEEEE--CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE-EEEEecCC-CE-EEEE
Confidence 33444454 478999999987653322 1222222 239999995 555555555555 67888753 32 2221
Q ss_pred cCc-----C--------ceeEEEEEEecCCCcccEEEEEe-CCCcEEEEecCCCC
Q 019349 220 RGT-----Y--------PSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAI 260 (342)
Q Consensus 220 ~~~-----~--------~~~v~~l~fs~d~~~~~~l~~~s-~dg~i~vwd~~~~~ 260 (342)
... . -.....|+|+|++. ++++-+ .++.|+.|++..+.
T Consensus 305 g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~---lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 305 GSATQKTVQDGLREEALFAQPNGMTVDEDGN---FYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp ECTTCCSCBCEEGGGCBCSSEEEEEECTTCC---EEEEETTTTCEEEEEETTTTE
T ss_pred eCCCCCCcCCCcccccEeCCCeEEEEeCCCC---EEEEeCCCCCEEEEEECCCCE
Confidence 110 0 12378899999998 888888 89999999975543
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.87 E-value=2.9e-08 Score=87.30 Aligned_cols=216 Identities=11% Similarity=0.116 Sum_probs=132.4
Q ss_pred EEEEcCCCCEEEEEc-CCcEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEE
Q 019349 12 FVSFNQDNSGFALST-KDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRE 90 (342)
Q Consensus 12 ~l~fs~d~~~la~g~-~~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~ 90 (342)
+..+..++. |.+++ +.++..|| .+++.......+......+..+.+..+.++. .+ |..+|. +++.+..
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t-------~~-l~~~d~-~g~~~~~ 92 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGS-------DK-VYAINP-DGTEKWR 92 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSS-------CE-EEEECC-CGGGGGG
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEec-------Cc-EEEECC-CCcEEEE
Confidence 345556776 44555 55689999 8887765443332222333333333344444 34 888886 5655443
Q ss_pred EecCCc-eEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccC
Q 019349 91 LNFLTS-ILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVME 168 (342)
Q Consensus 91 ~~~~~~-v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~ 168 (342)
+..... .....+..+.+.+++ ++.++.+|.. ++........... +.++...+++.+.+ +. .++.|..+|..
T Consensus 93 ~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~--~~~~~~~~~g~l~v-gt--~~~~l~~~d~~- 165 (330)
T 3hxj_A 93 FDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAI--YATPIVSEDGTIYV-GS--NDNYLYAINPD- 165 (330)
T ss_dssp SCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSSCC--CSCCEECTTSCEEE-EC--TTSEEEEECTT-
T ss_pred EECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCce--eeeeEEcCCCEEEE-Ec--CCCEEEEECCC-
Confidence 332221 122233466677766 7799999988 7766666543322 22223344555444 33 36889999998
Q ss_pred CceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC
Q 019349 169 LHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS 248 (342)
Q Consensus 169 ~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d 248 (342)
++....+......+.++.+.++|...+.. +.+ ..+| .+++.+..+... ...+.+++..+++. |..++.+
T Consensus 166 g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l-~~~d-~~g~~~~~~~~~--~~~~~~~~~~~~g~----l~v~t~~ 234 (330)
T 3hxj_A 166 GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKV-YAIN-PDGTEKWNFYAG--YWTVTRPAISEDGT----IYVTSLD 234 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTCCEEEES---SSE-EEEC-TTSCEEEEECCS--SCCCSCCEECTTSC----EEEEETT
T ss_pred CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEE-EEEC-CCCcEEEEEccC--CcceeceEECCCCe----EEEEcCC
Confidence 77776666666678888888888865544 555 5899 788877766432 23477788888886 6667778
Q ss_pred CcEEEEec
Q 019349 249 GSLHVFSP 256 (342)
Q Consensus 249 g~i~vwd~ 256 (342)
+.|..+|.
T Consensus 235 ~gl~~~~~ 242 (330)
T 3hxj_A 235 GHLYAINP 242 (330)
T ss_dssp TEEEEECT
T ss_pred CeEEEECC
Confidence 88888874
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.83 E-value=5.3e-06 Score=69.32 Aligned_cols=182 Identities=12% Similarity=0.048 Sum_probs=124.1
Q ss_pred CeEEEEEcCCCCEEEEEcCC---cEEEEeCCCCcEEEEEeeC-CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 9 PVFFVSFNQDNSGFALSTKD---GFKIFDSSTGRLCYERAVG-AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~---g~~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
-...+.|++ +.+..+.+.. .++++|+.+++++...... ......+....+.+..+.. .++.+.++|..+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw------~~~~v~v~D~~t 94 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW------RNHEGFVYDLAT 94 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------SSSEEEEEETTT
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe------eCCEEEEEECCc
Confidence 456889986 4444444443 4799999999988765432 2111122223456655554 589999999999
Q ss_pred CcEEEEEecCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCce---EEEEeeCCCccEEEEeCCCCccE
Q 019349 85 GTALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKG---LCAFSPSLNACFLAVPASTTKGS 160 (342)
Q Consensus 85 ~~~~~~~~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~g~ 160 (342)
.+.+.++..+..-..++.....++++. +++|.++|..+.+.+.++....++.. +..+.+. ++...+..- .+..
T Consensus 95 l~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw--~s~~ 171 (243)
T 3mbr_X 95 LTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW--LTSR 171 (243)
T ss_dssp TEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--TTTE
T ss_pred CcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC--CCCe
Confidence 999999988776677887777776665 66999999999999988876443221 2233333 344444443 3678
Q ss_pred EEEEEccCCceeEEEecc-------------cCCeeEEEECCCCCEEEEEeCC
Q 019349 161 VLVYNVMELHSHCEIDAH-------------QAPLAAIVLSSNGMYIATASEQ 200 (342)
Q Consensus 161 i~iwd~~~~~~~~~~~~h-------------~~~v~~i~~s~dg~~lat~s~d 200 (342)
|.+.|.++++.+..+... ..-.+.|+++|+++.|...+.-
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 999999999988877521 1356899999987776666543
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.81 E-value=9.7e-07 Score=74.51 Aligned_cols=178 Identities=12% Similarity=0.038 Sum_probs=121.6
Q ss_pred eEEEEEcCCCCEEEEEcCCc-EEEEeCCCCcEEEEEeeCC-EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 10 VFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGA-FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
...|.|+. +.+..+.+.++ ++++|+++++.+... ... .....+....+.+..+.. .++.+.++|.++.+.
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw------~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW------TEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES------SSCEEEEEETTTTEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc------cCCEEEEEECCcCcE
Confidence 46788873 44444445544 799999999876655 322 111123334555555554 589999999999999
Q ss_pred EEEEecCCceEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCce---EEEEeeCCCccEEEEeCCCCccEEEE
Q 019349 88 LRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKG---LCAFSPSLNACFLAVPASTTKGSVLV 163 (342)
Q Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~g~i~i 163 (342)
+.++.....-..++...+.++++. +++|.++|..+.+.+..+....++.. +..+.+. ++...+..- .++.|.+
T Consensus 129 ~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw--~s~~I~v 205 (268)
T 3nok_A 129 ERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW--HSSDVLE 205 (268)
T ss_dssp EEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--TCSEEEE
T ss_pred EEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC--CCCeEEE
Confidence 999988766677888887777765 67999999999999988876444322 2233333 444444443 4678999
Q ss_pred EEccCCceeEEEecc-------------cCCeeEEEECCCCCEEEEEe
Q 019349 164 YNVMELHSHCEIDAH-------------QAPLAAIVLSSNGMYIATAS 198 (342)
Q Consensus 164 wd~~~~~~~~~~~~h-------------~~~v~~i~~s~dg~~lat~s 198 (342)
.|.++++.+..+... .+-.+.|+++|+++.|...+
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999988877532 13578999999776555544
No 240
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.79 E-value=1.2e-06 Score=85.64 Aligned_cols=200 Identities=9% Similarity=0.061 Sum_probs=121.0
Q ss_pred EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEc-CCeEEEEE-C-------------C
Q 019349 49 FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLN-KKRLVIVL-R-------------E 113 (342)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~-~~~~~~~~-d-------------~ 113 (342)
+..+.+.++++.+++.... ......+|++||+.+++.+...........+.|+ .+.++... + .
T Consensus 131 l~~~~~SpDg~~lAy~~~~--~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSL--AGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEECTTSSEEEEEEEC--SSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEECCCCCEEEEEEec--CCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCc
Confidence 4456778888888865421 0013468999999999876532111112344555 44566665 3 2
Q ss_pred eEEEEECCCCce--eeEEeCCC-CCceEEEEeeCCCccEEEEeCC--CCccEEEEEEccCCc-eeEEEecccCCeeEEEE
Q 019349 114 KTYIYDANTLAI--LDTIDTVP-NLKGLCAFSPSLNACFLAVPAS--TTKGSVLVYNVMELH-SHCEIDAHQAPLAAIVL 187 (342)
Q Consensus 114 ~i~i~d~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~g~i~iwd~~~~~-~~~~~~~h~~~v~~i~~ 187 (342)
+|++|++.+.+. ...+.... ++.....+..++++.+|++... ...+.|.++|+.++. ....+..+....... +
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~ 287 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-V 287 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-E
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-E
Confidence 499999987643 22222222 2334566778888888765431 123589999998764 455666666666555 6
Q ss_pred CCCCCEEEEEeC-C---CcEEEEEEcCCCee--EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCC---cEEEEecCC
Q 019349 188 SSNGMYIATASE-Q---GTIIRVFLVSEATK--SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG---SLHVFSPGF 258 (342)
Q Consensus 188 s~dg~~lat~s~-d---g~~irlwd~~~~~~--~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg---~i~vwd~~~ 258 (342)
+++|..|+..+. + +++ ..+|+.++.. ...+..+. . .+. .|+++++ +|+....++ .|++|+++.
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l-~~~d~~~~~~~~~~~l~~~~-~-~~~--~~s~~g~---~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRL-VTVDAANPGPAHWRDLIPER-Q-QVL--TVHSGSG---YLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEETTEEEEEECTTCTTCEE-EEEETTSCCGGGCEEEECCC-S-SCE--EEEEETT---EEEEEEEETTEEEEEEECTTS
T ss_pred eccCCEEEEEECCCCCCCEE-EEEeCCCCCccccEEEecCC-C-CEE--EEEEECC---EEEEEEEECCeeEEEEEECCC
Confidence 677766655443 3 454 5899987653 23443322 2 233 8899998 777666544 688998874
Q ss_pred C
Q 019349 259 A 259 (342)
Q Consensus 259 ~ 259 (342)
.
T Consensus 360 ~ 360 (693)
T 3iuj_A 360 K 360 (693)
T ss_dssp C
T ss_pred C
Confidence 3
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.79 E-value=1.7e-06 Score=82.36 Aligned_cols=232 Identities=11% Similarity=0.062 Sum_probs=139.8
Q ss_pred CCEEEEEcCCc-EEEEeCCCCcEEEEEeeCC------EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEE
Q 019349 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGA------FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALREL 91 (342)
Q Consensus 19 ~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~ 91 (342)
+..+.+++.++ +..+|..+|+++.+..... +...-.. ..+.+.+.+.+.. ...++.|..+|.++|+.+.++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAE-LGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGG-GTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCc-cCCCCEEEEEECCCCcEEEEE
Confidence 45677776665 6889999998886654321 1100011 1233433332100 001689999999999999887
Q ss_pred ecCCce---------------------------------------EEEEEcC--CeEEEEEC-----------------C
Q 019349 92 NFLTSI---------------------------------------LAVRLNK--KRLVIVLR-----------------E 113 (342)
Q Consensus 92 ~~~~~v---------------------------------------~~i~~~~--~~~~~~~d-----------------~ 113 (342)
...... ..+.+++ +.+++... +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 653221 1133333 34444432 2
Q ss_pred eEEEEECCCCceeeEEeCCCCC-------ceEEEEeeCCCcc---EEEEeCCCCccEEEEEEccCCceeEEEeccc----
Q 019349 114 KTYIYDANTLAILDTIDTVPNL-------KGLCAFSPSLNAC---FLAVPASTTKGSVLVYNVMELHSHCEIDAHQ---- 179 (342)
Q Consensus 114 ~i~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~---- 179 (342)
.|..+|..+++.+..++...+. .....+....++. .++.+. .+|.+.++|..+++.+..++...
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID--RNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC--CCcEEEEEECCCCCEEeeecccCCccc
Confidence 5999999999998888754321 1112222212342 444454 58999999999998876554211
Q ss_pred ---------CCe--------------------------eEEEECCCCCEEEEEeC-------------------------
Q 019349 180 ---------APL--------------------------AAIVLSSNGMYIATASE------------------------- 199 (342)
Q Consensus 180 ---------~~v--------------------------~~i~~s~dg~~lat~s~------------------------- 199 (342)
.++ ..++|+|+..+|...+.
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 111 24678888877777642
Q ss_pred ------------CCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 200 ------------QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 200 ------------dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
+|. +..||+.+|+.+.++..+. .+.+..+...+. ++.+++.||.|+.||.++++.
T Consensus 431 ~~~~~~~~~~~~~g~-l~a~D~~tG~~~W~~~~~~---~~~~~~~~t~gg---~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQ-IRAFDLTTGKAKWTKWEKF---AAWGGTLYTKGG---LVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEECTTSTTSCCCEE-EEEECTTTCCEEEEEEESS---CCCSBCEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred eccCccccCCCCCCe-EEEEECCCCCEEEEecCCC---CccceeEEECCC---EEEEEcCCCeEEEEECCCCCE
Confidence 355 4699999999888775332 122223333444 688899999999999988765
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.76 E-value=5.2e-06 Score=72.33 Aligned_cols=188 Identities=10% Similarity=-0.028 Sum_probs=112.9
Q ss_pred EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEE-EE--CCeEEEEECCCCceee
Q 019349 51 IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVI-VL--REKTYIYDANTLAILD 127 (342)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~~--d~~i~i~d~~~~~~~~ 127 (342)
...+..+.+.+++++. .++.|..|+. +++..........+.++.++++..++ +. ++.|.+|+.. ++..
T Consensus 49 gp~~~~~g~~l~~~d~------~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~- 119 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDL------VGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH- 119 (305)
T ss_dssp EEEEEGGGTEEEEEET------TTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-
T ss_pred CCeEeCCCCEEEEEEC------CCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-
Confidence 3455566676666665 4789999998 45533222334578899998875444 44 3589999985 5432
Q ss_pred EEeCCCCC---ceEEEEeeCCCccEEEEe---CCC------------CccEEEEEEccCCceeEEEecccCCeeEEEECC
Q 019349 128 TIDTVPNL---KGLCAFSPSLNACFLAVP---AST------------TKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSS 189 (342)
Q Consensus 128 ~~~~~~~~---~~~~~~~~~~~~~~l~~~---~~~------------~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~ 189 (342)
.+...... .....+..++++.+.++- +.. ..+.|..||..+++..... +....+.++|+|
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp 197 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP 197 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECT
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC
Confidence 22111110 112345566777777642 100 1356888887666544333 445678899999
Q ss_pred CCCEEEEEeCC------CcEEEEEEcCCCeeEE---EeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 190 NGMYIATASEQ------GTIIRVFLVSEATKSY---SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 190 dg~~lat~s~d------g~~irlwd~~~~~~~~---~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
||+.|+.+... +. |++||+..+. +. .+.. ........+++.+++. +.+ ++.+ .|++|+.+
T Consensus 198 dg~~lyv~~~~~~~~~~~~-i~~~~~~~~~-l~~~~~~~~-~~~~~pdgi~~d~~G~---lwv-~~~~-gv~~~~~~ 266 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVE-ITAFAWRDGA-LHDRRHFAS-VPDGLPDGFCVDRGGW---LWS-SSGT-GVCVFDSD 266 (305)
T ss_dssp TSSEEEEEECCC---CCCE-EEEEEEETTE-EEEEEEEEC-CSSSCCCSEEECTTSC---EEE-CCSS-EEEEECTT
T ss_pred CCCEEEEEecCCcCCCCCE-EEEEEecCCC-ccCCeEEEE-CCCCCCCeEEECCCCC---EEE-ecCC-cEEEECCC
Confidence 99988877665 44 5799987654 21 1111 0122345688999997 444 4444 49999864
No 243
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.75 E-value=3.8e-06 Score=80.01 Aligned_cols=192 Identities=8% Similarity=0.056 Sum_probs=112.8
Q ss_pred CCEEEEEcC-Cc-EEEEeC-CCCcEEEEEeeCCEE-----------EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 19 NSGFALSTK-DG-FKIFDS-STGRLCYERAVGAFS-----------IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 19 ~~~la~g~~-~g-~~v~d~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
+..+.+++. ++ +.-+|. .+|+++.+.....-. ..........+.+.+ .++.|..+|.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~dg~l~alD~~t 134 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ-------ANGHLLALDAKT 134 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-------TTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEe-------CCCEEEEEECCC
Confidence 334555555 44 788999 899887665432100 000011233444333 378999999999
Q ss_pred CcEEEEEecCC-----ceE-EEEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCCCCc---------------
Q 019349 85 GTALRELNFLT-----SIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLK--------------- 136 (342)
Q Consensus 85 ~~~~~~~~~~~-----~v~-~i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~--------------- 136 (342)
|+.+.+..... .+. .-.+..+.+++.. ++.|+.+|..+++.+.++.......
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 214 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHY 214 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccc
Confidence 99998876543 222 1122345555544 4699999999999998876532210
Q ss_pred ------------------e---EEEEeeCCCccEEEEeCCCC--------------ccEEEEEEccCCceeEEEec--cc
Q 019349 137 ------------------G---LCAFSPSLNACFLAVPASTT--------------KGSVLVYNVMELHSHCEIDA--HQ 179 (342)
Q Consensus 137 ------------------~---~~~~~~~~~~~~l~~~~~~~--------------~g~i~iwd~~~~~~~~~~~~--h~ 179 (342)
+ ...++.+++...+..+.... .+.|..+|..+++.+-.++. |.
T Consensus 215 G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d 294 (571)
T 2ad6_A 215 GQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD 294 (571)
T ss_dssp CCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc
Confidence 0 00122233323333332100 14699999999998766653 21
Q ss_pred --------CCeeEEEECCCCC---EEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 180 --------APLAAIVLSSNGM---YIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 180 --------~~v~~i~~s~dg~---~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
.++. +...++|+ .++.++.+|.+ .++|..+|+.+..++
T Consensus 295 ~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l-~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 295 EWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGIL-YTLNRENGNLIVAEK 343 (571)
T ss_dssp SSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEE-EEEETTTCCEEEEEE
T ss_pred ccccccCCCCEE-EecccCCcEEEEEEEeCCCcEE-EEEECCCCCEEeeec
Confidence 2221 22334774 57788888875 699999999887764
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.74 E-value=8.5e-07 Score=77.79 Aligned_cols=215 Identities=9% Similarity=0.030 Sum_probs=132.8
Q ss_pred CCEEEEEcC-CcEEEEeCCCCcEEEEEeeCCE--EEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCC
Q 019349 19 NSGFALSTK-DGFKIFDSSTGRLCYERAVGAF--SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT 95 (342)
Q Consensus 19 ~~~la~g~~-~g~~v~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 95 (342)
+..|.+|+. .++..||.. ++.......... ....... ...+.+.+ .++.|..+|.. ++.+..+....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt-------~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGTIYVGS-------NDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSCEEEEC-------TTSEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCEEEEEc-------CCCEEEEECCC-CCEeEEEecCC
Confidence 344666764 568899988 766655433221 1112222 23344433 36899999998 88777776543
Q ss_pred -ceEEEEEc-CCeEEEEECCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeE
Q 019349 96 -SILAVRLN-KKRLVIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHC 173 (342)
Q Consensus 96 -~v~~i~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~ 173 (342)
.+.++... ...+.+++ +.++.+| .+++.+........ .+.++..++++...+.. .++.|..+| .+++.+.
T Consensus 177 ~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~--~~~~~~~~~~g~l~v~t---~~~gl~~~~-~~g~~~~ 248 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYW--TVTRPAISEDGTIYVTS---LDGHLYAIN-PDGTEKW 248 (330)
T ss_dssp CCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSC--CCSCCEECTTSCEEEEE---TTTEEEEEC-TTSCEEE
T ss_pred CceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCc--ceeceEECCCCeEEEEc---CCCeEEEEC-CCCCEeE
Confidence 45666674 44566666 9999999 77776666654322 23344445565555443 356788887 4566666
Q ss_pred EEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEE
Q 019349 174 EIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHV 253 (342)
Q Consensus 174 ~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~v 253 (342)
.+......+.++.+.++|. |..++.+|.+ ..+|. +++.+..+... ...+.++...+++. |..++.+|.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl-~~~d~-~g~~~~~~~~~--~~~~~~~~~d~~g~----l~~gt~~G~~~~ 319 (330)
T 3hxj_A 249 RFKTGKRIESSPVIGNTDT-IYFGSYDGHL-YAINP-DGTEKWNFETG--SWIIATPVIDENGT----IYFGTRNGKFYA 319 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTCEE-EEECT-TSCEEEEEECS--SCCCSCCEECTTCC----EEEECTTSCEEE
T ss_pred EeeCCCCccccceEcCCCe-EEEecCCCCE-EEECC-CCcEEEEEEcC--CccccceEEcCCCE----EEEEcCCCeEEE
Confidence 6655555556677776665 6667777765 58885 77777666432 23366677778886 778999999999
Q ss_pred EecCCCC
Q 019349 254 FSPGFAI 260 (342)
Q Consensus 254 wd~~~~~ 260 (342)
...+..+
T Consensus 320 ~~~~~~~ 326 (330)
T 3hxj_A 320 LFNLEHH 326 (330)
T ss_dssp EEC----
T ss_pred Eeccccc
Confidence 9876544
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.72 E-value=8.7e-05 Score=63.10 Aligned_cols=227 Identities=4% Similarity=-0.053 Sum_probs=128.4
Q ss_pred CCEEEEEcCCcEEEEeCCCCcE-------EEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEE
Q 019349 19 NSGFALSTKDGFKIFDSSTGRL-------CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALREL 91 (342)
Q Consensus 19 ~~~la~g~~~g~~v~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~ 91 (342)
|.+|..+..+.++.++++.... ...........+.+....+.+.++.. ..+.|..+|...+.....+
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI------SEPSIGRASLHGGEPTTII 74 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC------CCCEEEEEecCCCCcEEEE
Confidence 3456666555677788765431 12211222334555555666666654 3689999998765543333
Q ss_pred ecC-CceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC-CccEEEEEE
Q 019349 92 NFL-TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST-TKGSVLVYN 165 (342)
Q Consensus 92 ~~~-~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~g~i~iwd 165 (342)
... ....++++++ ..++++. .+.|.++++..... ..+... .......++.++++..|..+... ..+.|..++
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDT-GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEEC-CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 222 4678888876 3556555 56899999864322 222211 11223445556643344333321 147898888
Q ss_pred ccCCceeEEE-ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEE
Q 019349 166 VMELHSHCEI-DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA 244 (342)
Q Consensus 166 ~~~~~~~~~~-~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~ 244 (342)
+.... ...+ .......+.|++++++..|..+......|.++|.........+... .....|++. ++. ++++
T Consensus 153 ~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---~~P~gi~~d-~~~---lyva 224 (267)
T 1npe_A 153 MDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---QYPFAVTSY-GKN---LYYT 224 (267)
T ss_dssp TTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC---CSEEEEEEE-TTE---EEEE
T ss_pred cCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC---CCceEEEEe-CCE---EEEE
Confidence 75432 2222 2233457899999988777666655444689998754433222211 123566654 343 4555
Q ss_pred EeCCCcEEEEecCCCCC
Q 019349 245 TSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 245 ~s~dg~i~vwd~~~~~~ 261 (342)
....+.|.++|.++++.
T Consensus 225 ~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 225 DWKTNSVIAMDLAISKE 241 (267)
T ss_dssp ETTTTEEEEEETTTTEE
T ss_pred ECCCCeEEEEeCCCCCc
Confidence 55678999999876653
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.71 E-value=2.3e-06 Score=83.09 Aligned_cols=190 Identities=17% Similarity=0.095 Sum_probs=115.3
Q ss_pred CCEEEEEcCCc-EEEEeCCCCcEEEEEeeCCEE-----------EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGAFS-----------IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 19 ~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
+..|.+++.++ +.-+|..+|+++.+.....-. ........+.+.+.+ .++.|..+|.++|+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT-------LDGRLIALDAKTGK 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC-------TTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc-------CCCEEEEEECCCCC
Confidence 34455555554 688899999888765432100 000001123444433 37899999999999
Q ss_pred EEEEEecCC-----ceE-EEEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCC-CCce---------------
Q 019349 87 ALRELNFLT-----SIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVP-NLKG--------------- 137 (342)
Q Consensus 87 ~~~~~~~~~-----~v~-~i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~-~~~~--------------- 137 (342)
.+.+..... .+. .-.+..+.+++.. ++.|+.+|..+++.+..+.... .+..
T Consensus 139 ~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 139 AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp EEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred EeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCC
Confidence 998876531 111 1122345555543 3689999999999998886521 1110
Q ss_pred -------------EEEEeeCCCccEEEEeCCCCcc-------------------EEEEEEccCCceeEEEec--cc----
Q 019349 138 -------------LCAFSPSLNACFLAVPASTTKG-------------------SVLVYNVMELHSHCEIDA--HQ---- 179 (342)
Q Consensus 138 -------------~~~~~~~~~~~~l~~~~~~~~g-------------------~i~iwd~~~~~~~~~~~~--h~---- 179 (342)
....+.+++...+.++. .++ .|..+|..+++.+-.++. |.
T Consensus 219 g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~--~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~ 296 (668)
T 1kv9_A 219 GDQYWKLGGGGTVWDSMAYDPELDLLYVGT--GNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF 296 (668)
T ss_dssp SSCHHHHCEECCCCSCEEEETTTTEEEEEC--CCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred ccceeeeCCCCccccceEEcCCCCEEEEeC--CCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc
Confidence 01233444444555544 234 499999999998876653 32
Q ss_pred ---CCeeEEEECCCCC---EEEEEeCCCcEEEEEEcCCCeeEEEe
Q 019349 180 ---APLAAIVLSSNGM---YIATASEQGTIIRVFLVSEATKSYSF 218 (342)
Q Consensus 180 ---~~v~~i~~s~dg~---~lat~s~dg~~irlwd~~~~~~~~~~ 218 (342)
.+.....+..+|+ .|+.++.+|.+ .++|..+|+.+...
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l-~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGFF-YVLDRTNGKLISAE 340 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEE-EEEETTTCCEEEEE
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCEE-EEEECCCCCEeccc
Confidence 3333333334675 68899999975 79999999988544
No 247
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.66 E-value=1.3e-06 Score=77.67 Aligned_cols=155 Identities=12% Similarity=0.154 Sum_probs=99.2
Q ss_pred CceEEEEEcCCe-EEEEE-------CCeEEEEECCCCceeeEEeCCCC----CceEEEEeeCCCccEEEEeCC--CCccE
Q 019349 95 TSILAVRLNKKR-LVIVL-------REKTYIYDANTLAILDTIDTVPN----LKGLCAFSPSLNACFLAVPAS--TTKGS 160 (342)
Q Consensus 95 ~~v~~i~~~~~~-~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~--~~~g~ 160 (342)
..+.+++++++. ++++. +.+|.+||+.+++.++.+..+.. ......+..++++..+..+.. ..++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 368999999865 44444 26899999999988877764321 111233344433223323321 02578
Q ss_pred EEEEEccCCceeEEEeccc-----------------------------CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 019349 161 VLVYNVMELHSHCEIDAHQ-----------------------------APLAAIVLSSNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 161 i~iwd~~~~~~~~~~~~h~-----------------------------~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~ 211 (342)
|.+||+.+++..+.+..|. ..++.|+|+|||+.|+.+..++. ++|.+..
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~--~l~~~~~ 224 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST--SMYRIKS 224 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS--EEEEEEH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC--eEEEEEH
Confidence 9999998877665554321 23688999999999999988876 3555432
Q ss_pred C-----e--------eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 212 A-----T--------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 212 ~-----~--------~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
. . .+..+ + .......+++++++. ++++...++.|.+||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~--g-~~g~pdgia~d~~G~---l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIERY--S-EKPICDGISIDKDHN---IYVGDLAHSAIGVITSA 277 (343)
T ss_dssp HHHTCTTCCHHHHHTTCEEE--E-ECCSCSCEEECTTCC---EEEEEGGGTEEEEEETT
T ss_pred HHhcCCCCChhhhhcceEec--c-cCCCCceEEECCCCC---EEEEccCCCeEEEEECC
Confidence 1 1 00111 0 011245689999998 88888999999999973
No 248
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.62 E-value=1.6e-06 Score=77.73 Aligned_cols=216 Identities=8% Similarity=-0.031 Sum_probs=128.5
Q ss_pred cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCC---CCCCCeEEEEECCCCcEEEEEecC--------Cce
Q 019349 29 GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQP---SLSPRRLCLFNTTTGTALRELNFL--------TSI 97 (342)
Q Consensus 29 g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~d~~i~iwd~~~~~~~~~~~~~--------~~v 97 (342)
.+.++|..+++.+.....+....+.+.++...+.++..+... ...+++|.+||+.+++.+.++..+ ...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT
T ss_pred eEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCc
Confidence 567999999988876654333357777888877776521000 002689999999999999998765 235
Q ss_pred EEEEEcCC--eEEEEE---CCeEEE--EECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccC--
Q 019349 98 LAVRLNKK--RLVIVL---REKTYI--YDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVME-- 168 (342)
Q Consensus 98 ~~i~~~~~--~~~~~~---d~~i~i--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~-- 168 (342)
..+.++++ .++++. .+.+.+ +|..+ +..+..... ..+.+.+...++ +.+ .||.+.+.|+.+
T Consensus 127 ~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~--~~~-~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHY--LGS-CPASLAASDLAAAP 196 (368)
T ss_dssp TSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEE--CCC-CTTSCEEEECCSSC
T ss_pred ceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEE--EEc-CCCCEEEEECcccc
Confidence 67788776 466665 357888 88876 556654221 122333333333 222 478888888876
Q ss_pred ---CceeE----EEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe--eEEEeccC--------cCceeEEEEE
Q 019349 169 ---LHSHC----EIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT--KSYSFRRG--------TYPSTIFSLS 231 (342)
Q Consensus 169 ---~~~~~----~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~--~~~~~~~~--------~~~~~v~~l~ 231 (342)
++... .+.....|. . ++++..++..+. +++ .+.|+.+++ .+..+... ..+.....++
T Consensus 197 ~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V-~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSI-LQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCC-EEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred ccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEE-EEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 33221 122223344 3 566666666666 775 689986542 22222111 0011112268
Q ss_pred EecCCCcccEEEEEeC---------CCcEEEEecCCCCCCC
Q 019349 232 FGQSMQFQDILVATSS---------SGSLHVFSPGFAINQR 263 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~---------dg~i~vwd~~~~~~~~ 263 (342)
|+||++ .|.++.. ++.+.++|+++.+..+
T Consensus 271 ~s~dg~---~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~ 308 (368)
T 1mda_H 271 KLKNTD---GIMILTVEHSRSCLAAAENTSSVTASVGQTSG 308 (368)
T ss_dssp EETTTT---EEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred EcCCCC---EEEEEeccccCcccccCCCEEEEECCCCeEEE
Confidence 999998 6776543 2467799998876533
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.61 E-value=1.7e-05 Score=75.69 Aligned_cols=192 Identities=8% Similarity=0.039 Sum_probs=113.6
Q ss_pred CCEEEEEcC-Cc-EEEEeC-CCCcEEEEEeeCCE-------------EEEEEcCCCCe----EEEEcCCCCCCCCCCeEE
Q 019349 19 NSGFALSTK-DG-FKIFDS-STGRLCYERAVGAF-------------SIVEMLYSSSL----LAIVGAGEQPSLSPRRLC 78 (342)
Q Consensus 19 ~~~la~g~~-~g-~~v~d~-~~~~~~~~~~~~~~-------------~~~~~~~~~~~----~~~~~~g~~~~~~d~~i~ 78 (342)
+..|.+++. ++ +.-+|. .+|+++.+.....- .-+...+.... +.+.+ .++.|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t-------~dg~l~ 134 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ-------LDGNVA 134 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC-------TTSEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc-------CCCEEE
Confidence 344555654 44 788899 89988766543210 00111001222 43333 378999
Q ss_pred EEECCCCcEEEEEecCC-----ceEE-EEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCCCCce--------
Q 019349 79 LFNTTTGTALRELNFLT-----SILA-VRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLKG-------- 137 (342)
Q Consensus 79 iwd~~~~~~~~~~~~~~-----~v~~-i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~-------- 137 (342)
.+|.++|+.+.+..... .+.+ -.+..+.+++.. ++.|+-+|..+++.+..+........
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~ 214 (599)
T 1w6s_A 135 ALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFN 214 (599)
T ss_dssp EEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTT
T ss_pred EEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccc
Confidence 99999999998876543 2221 122345555543 57999999999999988765432100
Q ss_pred ---------------------------E-EEEeeCCCccEEEEeCCCC--------------ccEEEEEEccCCceeEEE
Q 019349 138 ---------------------------L-CAFSPSLNACFLAVPASTT--------------KGSVLVYNVMELHSHCEI 175 (342)
Q Consensus 138 ---------------------------~-~~~~~~~~~~~l~~~~~~~--------------~g~i~iwd~~~~~~~~~~ 175 (342)
+ ...+.+++...+..+.... .+.|..+|..+++.+-.+
T Consensus 215 ~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~ 294 (599)
T 1w6s_A 215 IKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (599)
T ss_dssp TTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred cccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe
Confidence 0 0122223333444433211 247999999999987666
Q ss_pred ec--cc--------CCeeEEEEC-CCC---CEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 176 DA--HQ--------APLAAIVLS-SNG---MYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 176 ~~--h~--------~~v~~i~~s-~dg---~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
+. |. .++. +... .+| ..++.++.+|.+ .++|.++|+.+....
T Consensus 295 q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l-~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIV-YTLDRTDGALVSANK 350 (599)
T ss_dssp ESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEE-EEEETTTCCEEEEEE
T ss_pred ecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEE-EEEECCCCCEeeccc
Confidence 53 21 2222 2222 577 567788899975 699999999887664
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.61 E-value=2.4e-05 Score=74.75 Aligned_cols=229 Identities=10% Similarity=0.064 Sum_probs=135.6
Q ss_pred EEEEcCCc-EEEEeCCCCcEEEEEeeCC------EEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC
Q 019349 22 FALSTKDG-FKIFDSSTGRLCYERAVGA------FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (342)
Q Consensus 22 la~g~~~g-~~v~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~ 94 (342)
+.+++.++ +.-+|..+|+++.+..... +...-... .+.+.+.+.+.. ...++.|..+|.++|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e-~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAE-LGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGG-GTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccc-cCCCCeEEEEECCCCcEEEEEcCC
Confidence 77777666 6888999998886654321 11000111 233333221100 002689999999999999887654
Q ss_pred CceE---------------------------------------EEEE--cCCeEEEEE-C----------------CeEE
Q 019349 95 TSIL---------------------------------------AVRL--NKKRLVIVL-R----------------EKTY 116 (342)
Q Consensus 95 ~~v~---------------------------------------~i~~--~~~~~~~~~-d----------------~~i~ 116 (342)
.... .+.+ ..+.+++.. + +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 3210 1222 233444444 2 3799
Q ss_pred EEECCCCceeeEEeCCCCCc-------eEEEEeeC-CCc---cEEEEeCCCCccEEEEEEccCCceeEEEecc-------
Q 019349 117 IYDANTLAILDTIDTVPNLK-------GLCAFSPS-LNA---CFLAVPASTTKGSVLVYNVMELHSHCEIDAH------- 178 (342)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~---~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h------- 178 (342)
.+|..+++.+..++...+.. ..+.+... .++ ..++.+. .+|.+.++|.++++.+...+..
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPD--RNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEEC--CCcEEEEEECCCCCEeecccccCCccccc
Confidence 99999999998887654311 11122211 234 3455455 5899999999999887654421
Q ss_pred ------cCCe--------------------------eEEEECCCCCEEEEEe----------------------------
Q 019349 179 ------QAPL--------------------------AAIVLSSNGMYIATAS---------------------------- 198 (342)
Q Consensus 179 ------~~~v--------------------------~~i~~s~dg~~lat~s---------------------------- 198 (342)
..++ ..++|+|+..++....
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 1111 2467787776665532
Q ss_pred -----------CCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 199 -----------EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 199 -----------~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.+|. +.-||+.+|+.+.+...+. +..+-.+...+. ++..++.||.++.||.++++.
T Consensus 440 ~~p~~~~~~~~~~G~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg---~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQ-IKAYNAITGDYKWEKMERF---AVWGGTMATAGD---LVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp ECTTSBTTTTBCCEE-EEEECTTTCCEEEEEEESS---CCCSBCEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred cCCcCCcccCCCcCe-EEEEECCCCCEEeEecCCC---CccCcceEecCC---EEEEECCCCeEEEEECCCCCE
Confidence 2355 4689999999887764321 111111223444 788899999999999998875
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.59 E-value=5.5e-05 Score=66.30 Aligned_cols=232 Identities=13% Similarity=0.078 Sum_probs=131.0
Q ss_pred CeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEEe---------------------eCCEEEEEEcCCCCeEEEEcC
Q 019349 9 PVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERA---------------------VGAFSIVEMLYSSSLLAIVGA 66 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 66 (342)
...+++|+++|+.+.++..+ .+..|+..+++...-.. ......+.+......+.++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 34578899999867777655 47888887765432111 012233444432344555543
Q ss_pred CCCCCCCCCeEEEEECCCCcEEEEEe--cC----CceEEEEEcC-Ce-EEEEE-C------------------CeEEEEE
Q 019349 67 GEQPSLSPRRLCLFNTTTGTALRELN--FL----TSILAVRLNK-KR-LVIVL-R------------------EKTYIYD 119 (342)
Q Consensus 67 g~~~~~~d~~i~iwd~~~~~~~~~~~--~~----~~v~~i~~~~-~~-~~~~~-d------------------~~i~i~d 119 (342)
.+.|..+|..+++. ..+. .. ....++++.+ +. ++++. . +.++.||
T Consensus 100 -------~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 100 -------YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp -------TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred -------CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 34588888765532 2221 11 2467888887 65 44443 1 4688888
Q ss_pred CCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc--eeEEEecccCCeeEEEECCCCCEEEEE
Q 019349 120 ANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH--SHCEIDAHQAPLAAIVLSSNGMYIATA 197 (342)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~--~~~~~~~h~~~v~~i~~s~dg~~lat~ 197 (342)
..+++..........+. .++.++++..|.++.. ..+.|.+|++.... ....+..... ...|+++++|++.++.
T Consensus 172 ~~~~~~~~~~~~~~~p~---gia~~~dg~~lyv~d~-~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 172 PSTKETTLLLKELHVPG---GAEVSADSSFVLVAEF-LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp TTTTEEEEEEEEESCCC---EEEECTTSSEEEEEEG-GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred CCCCEEEEeccCCccCc---ceEECCCCCEEEEEeC-CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 77665432222112222 3455667665555432 46889999987421 1122211223 7889999999977776
Q ss_pred eC----------CCcEEEEEEcCCCeeEEEeccCcC--ceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 198 SE----------QGTIIRVFLVSEATKSYSFRRGTY--PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 198 s~----------dg~~irlwd~~~~~~~~~~~~~~~--~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.. .+.+ ..+|. .|+.+..+..... ...+.++++ .+++ ++++....+.|.+++++..
T Consensus 247 ~~~~~~~~~~~~~~~v-~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~---L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKG-IKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGL---LYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEETTSSTTSCEEEEE-EEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTE---EEEECSSCSEEEEEEC---
T ss_pred cCcccccccCCCccEE-EEECC-CCCEEEEEECCCCCccccceEEEE-eCCE---EEEeecCCCceEEEecccc
Confidence 54 3444 57776 5777666643211 123566666 4665 5666567888999998643
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.58 E-value=6.8e-06 Score=77.19 Aligned_cols=186 Identities=9% Similarity=-0.021 Sum_probs=126.1
Q ss_pred CCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC--CceEEEEEc--C--CeEEEEE-------------------
Q 019349 57 SSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL--TSILAVRLN--K--KRLVIVL------------------- 111 (342)
Q Consensus 57 ~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~i~~~--~--~~~~~~~------------------- 111 (342)
++.++.+... .++.|.+.|+.+.++...++.+ .....+++. | .+++++.
T Consensus 100 DG~~lfVnd~------~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 100 DGRFLFMNDK------ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEET------TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCEEEEEcC------CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 3445555443 4778999999999988855543 467888862 3 3555553
Q ss_pred CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC----------------------------------
Q 019349 112 REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT---------------------------------- 157 (342)
Q Consensus 112 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------------------------- 157 (342)
++.+.+.|..+++...++....++.++ ++ ++++.++++++...
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~-~~--spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNC-DA--DYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCE-EE--CSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred CceEEEEECCCCeEEEEEEeCCCccce-EE--CCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 247899999999999998775565544 33 44566666554321
Q ss_pred --ccEEEEEEccC--Cce-eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe------------eEEEecc
Q 019349 158 --KGSVLVYNVME--LHS-HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT------------KSYSFRR 220 (342)
Q Consensus 158 --~g~i~iwd~~~--~~~-~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~------------~~~~~~~ 220 (342)
-+.|.|.|.++ ++. +..++.- ....++.++|||++++.++.....+.++|+.+.+ ...+...
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred eEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 12377777776 444 4555542 3457899999999988877544446799998653 2334433
Q ss_pred CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 221 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 221 ~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
+. ....++|+|||. ...+.-.|++|.+||++.
T Consensus 330 G~---gP~h~aF~~dG~---aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GL---GPLHTAFDGRGN---AYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CS---CEEEEEECTTSE---EEEEETTTTEEEEEEHHH
T ss_pred CC---CcceEEECCCCe---EEEEEecCCcEEEEEhhH
Confidence 32 257789999996 777888899999999976
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.54 E-value=4.5e-05 Score=71.66 Aligned_cols=235 Identities=9% Similarity=0.006 Sum_probs=146.2
Q ss_pred CCCCEEEEEcCCc--EEEEeCCCCcEEE--EEee-CCEEEEEE-c-CCCCeEEEEcCCCCC-----------CCCCCeEE
Q 019349 17 QDNSGFALSTKDG--FKIFDSSTGRLCY--ERAV-GAFSIVEM-L-YSSSLLAIVGAGEQP-----------SLSPRRLC 78 (342)
Q Consensus 17 ~d~~~la~g~~~g--~~v~d~~~~~~~~--~~~~-~~~~~~~~-~-~~~~~~~~~~~g~~~-----------~~~d~~i~ 78 (342)
+||++|.+...+. +.+.|+.+.+... +... .....+.+ . ++..++...+....| ...++.+-
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 4999987765544 7899999987654 3321 33333444 3 567777555421111 01356899
Q ss_pred EEECCCCcEEEEEecCCceEEEEEcCC--eEEEEE--C-------------------------------------CeEEE
Q 019349 79 LFNTTTGTALRELNFLTSILAVRLNKK--RLVIVL--R-------------------------------------EKTYI 117 (342)
Q Consensus 79 iwd~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~~--d-------------------------------------~~i~i 117 (342)
++|..+.+.+.++........+.++++ ..+++. . +.|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999998888876444444555544 233333 1 23666
Q ss_pred EECCC--Cce-eeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc------------eeEEEecccCCe
Q 019349 118 YDANT--LAI-LDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH------------SHCEIDAHQAPL 182 (342)
Q Consensus 118 ~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~------------~~~~~~~h~~~v 182 (342)
.|..+ ++. +..+.....+. ++..+||+.++++++. .+.+|.++|+.+.+ .+..++. ....
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~Ph---Gv~~sPDGk~v~V~~~-~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP 333 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPH---GCNMAPDKKHLCVAGK-LSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGP 333 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCC---CEEECTTSSEEEEECT-TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCE
T ss_pred EeCcccCCceeEEEEecCCCce---EEEEcCCCCEEEEeCC-CCCeEEEEECcccccccccccCcccceEEEcCC-CCCc
Confidence 67665 434 45554433332 3466788988888886 68999999998653 2333332 3456
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEEEcCC----------CeeEEEeccCcCceeEE---EEEEecCCCcccEEEEEeCC-
Q 019349 183 AAIVLSSNGMYIATASEQGTIIRVFLVSE----------ATKSYSFRRGTYPSTIF---SLSFGQSMQFQDILVATSSS- 248 (342)
Q Consensus 183 ~~i~~s~dg~~lat~s~dg~~irlwd~~~----------~~~~~~~~~~~~~~~v~---~l~fs~d~~~~~~l~~~s~d- 248 (342)
..++|+|||...++.-.|+++ -+||+.+ .+.+.++..+..+++.. ++.++|||+ +|++...-
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV-~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk---~l~~~Nk~s 409 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQV-VKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND---WLVCLSKFS 409 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEE-EEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS---EEEEEESCC
T ss_pred ceEEECCCCeEEEEEecCCcE-EEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC---EEEEcCCCC
Confidence 889999999444455567765 5899977 45667776554443322 235689999 88887542
Q ss_pred -CcE-----------EEEecCCCC
Q 019349 249 -GSL-----------HVFSPGFAI 260 (342)
Q Consensus 249 -g~i-----------~vwd~~~~~ 260 (342)
..+ .++|+...+
T Consensus 410 kdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 410 KDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TTSSCCCCSSCCEEEEEEECSSSS
T ss_pred ccccccCCCCCCCcceEEEcCCCc
Confidence 234 899996554
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.53 E-value=6.2e-05 Score=71.77 Aligned_cols=194 Identities=13% Similarity=0.029 Sum_probs=110.2
Q ss_pred CCCEEEEEcCCcEEEEeCCCCcEEEEEeeCCEE--E-------EEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEE
Q 019349 18 DNSGFALSTKDGFKIFDSSTGRLCYERAVGAFS--I-------VEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL 88 (342)
Q Consensus 18 d~~~la~g~~~g~~v~d~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~ 88 (342)
++..++++..+++.-+|..+|+++.+.....-. . .......+.+.+.+ .++.|..+|.++|+.+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t-------~dg~l~AlD~~TG~~~ 140 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT-------LDASVVALNKNTGKVV 140 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE-------TTTEEEEEESSSCCEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe-------CCCEEEEEECCCCCEE
Confidence 444344444356788899999887665432100 0 00001123443333 3789999999999999
Q ss_pred EEEecCC-----ceE-EEEEcCC------eEEEEE-------CCeEEEEECCCCceeeEEeCCCCCce-----E------
Q 019349 89 RELNFLT-----SIL-AVRLNKK------RLVIVL-------REKTYIYDANTLAILDTIDTVPNLKG-----L------ 138 (342)
Q Consensus 89 ~~~~~~~-----~v~-~i~~~~~------~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~-----~------ 138 (342)
.+..... .+. .-.+..+ .+++.. ++.|+-+|..+++.+........... .
T Consensus 141 W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~ 220 (582)
T 1flg_A 141 WKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGD 220 (582)
T ss_dssp EEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSC
T ss_pred eeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccc
Confidence 8876532 111 1111222 344432 57899999999998876654210000 0
Q ss_pred ----------------------------EEEeeCCCccEEEEeCC------------C----------CccEEEEEEccC
Q 019349 139 ----------------------------CAFSPSLNACFLAVPAS------------T----------TKGSVLVYNVME 168 (342)
Q Consensus 139 ----------------------------~~~~~~~~~~~l~~~~~------------~----------~~g~i~iwd~~~ 168 (342)
...+.+++...+.++.. . ..+.|..+|..+
T Consensus 221 ~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~T 300 (582)
T 1flg_A 221 VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS 300 (582)
T ss_dssp TTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTT
T ss_pred cccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCC
Confidence 01122223233333221 0 116899999999
Q ss_pred CceeEEEec--cc--------CCeeEEEEC-CCCC---EEEEEeCCCcEEEEEEcCCCeeEEEecc
Q 019349 169 LHSHCEIDA--HQ--------APLAAIVLS-SNGM---YIATASEQGTIIRVFLVSEATKSYSFRR 220 (342)
Q Consensus 169 ~~~~~~~~~--h~--------~~v~~i~~s-~dg~---~lat~s~dg~~irlwd~~~~~~~~~~~~ 220 (342)
++.+-.++. |. .++. +... .+|+ .|+.++.+|.+ .++|..+|+.+..+..
T Consensus 301 G~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l-~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 301 GEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFF-YVVDRSNGKLQNAFPF 364 (582)
T ss_dssp CCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEE-EEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceE-EEEECCCCCEeccccc
Confidence 998866643 32 1221 2222 5774 78889999975 7999999999877643
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.48 E-value=0.00041 Score=58.84 Aligned_cols=216 Identities=6% Similarity=-0.060 Sum_probs=126.5
Q ss_pred CeEEEEEcCCCCEEEEEc-CC-cEEEEeCCCCcEEEEEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 9 PVFFVSFNQDNSGFALST-KD-GFKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~-~~-g~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
.+.+++|++++..|..+. .. .+.+++++.......... .....+.+.+..+.+.++.. ..+.|.++|...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~------~~~~I~~~~~~g 110 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS------QLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC------CCCEEEEEEcCC
Confidence 356899999877766554 33 478889876543222211 23344555555566655554 367899999864
Q ss_pred CcEEEEEecC-CceEEEEEcC--CeEEEEE-C---CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC
Q 019349 85 GTALRELNFL-TSILAVRLNK--KRLVIVL-R---EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (342)
Q Consensus 85 ~~~~~~~~~~-~~v~~i~~~~--~~~~~~~-d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (342)
.......... .....+++++ ..++++. . +.|..+++... ....+.. ........++.++++..|..+.. .
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~-~~~~~P~gia~d~~~~~lyv~d~-~ 187 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQ-DNLGLPNGLTFDAFSSQLCWVDA-G 187 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEEC-TTCSCEEEEEEETTTTEEEEEET-T
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEE-CCCCCCcEEEEcCCCCEEEEEEC-C
Confidence 4322222222 3578899987 3455555 2 47888887532 2233321 11123445566665555555544 4
Q ss_pred ccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCC
Q 019349 158 KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 237 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~ 237 (342)
.+.|.++|.........+..- .....|++. +..|..+...+..|..+|..+++.+..+..+.. .....+++.|++.
T Consensus 188 ~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~-~~p~gi~~~~~~~ 263 (267)
T 1npe_A 188 THRAECLNPAQPGRRKVLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQ-TRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEETTEEEEEEEEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSC-CCCCCEEEECSCC
T ss_pred CCEEEEEecCCCceEEEecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccc-cccceeeecCccC
Confidence 689999998765443333332 233567664 455555554433367999999998888864421 1356788888864
No 256
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.47 E-value=0.00051 Score=59.43 Aligned_cols=219 Identities=13% Similarity=0.193 Sum_probs=144.0
Q ss_pred EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEE-cCCeEE
Q 019349 30 FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLV 108 (342)
Q Consensus 30 ~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~ 108 (342)
+.+.|+.+........... ...-|.+..+.+|+-++ +++.++|+++.+.+..+.++..|.=-.| +++.+.
T Consensus 51 VvIiDl~n~~~~~Rrpi~A-dsAIMnP~~~ViALrag--------~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~ 121 (365)
T 2xzh_A 51 VVIIDMNDPSNPIRRPISA-DSAIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 121 (365)
T ss_dssp EEEEETTSTTSCEEEECCC-SEEEECSSSSEEEEEET--------TEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEE
T ss_pred EEEEECCCCCCcccccccc-ceeeeCCCccEEEEecC--------CeEEEechHHhhhhcceecCCccEEEEecCCCeEE
Confidence 5777887754332222222 12345667778887764 6999999999999999999888877776 777888
Q ss_pred EEECCeEEEEECCCC-ceeeEEeCCCC--CceEEEEeeCCCccEEEEeCC-----CCccEEEEEEccCCceeEEEecccC
Q 019349 109 IVLREKTYIYDANTL-AILDTIDTVPN--LKGLCAFSPSLNACFLAVPAS-----TTKGSVLVYNVMELHSHCEIDAHQA 180 (342)
Q Consensus 109 ~~~d~~i~i~d~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-----~~~g~i~iwd~~~~~~~~~~~~h~~ 180 (342)
++++..|+-|++... .+.+-++.+.+ ...+..+..+++..+++..|- .-.|.+++|..+.. ..+.+++|..
T Consensus 122 lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 200 (365)
T 2xzh_A 122 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 200 (365)
T ss_dssp EEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEE
T ss_pred EEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeee
Confidence 899999999999753 45555555432 356778888888888876651 13588999998764 4567888877
Q ss_pred CeeEEEECCC---CCEEEEEeC--CCcEEEEEEcCCC---e-----eEEEe--ccCcCceeEEEEEEecCCCcccEEEEE
Q 019349 181 PLAAIVLSSN---GMYIATASE--QGTIIRVFLVSEA---T-----KSYSF--RRGTYPSTIFSLSFGQSMQFQDILVAT 245 (342)
Q Consensus 181 ~v~~i~~s~d---g~~lat~s~--dg~~irlwd~~~~---~-----~~~~~--~~~~~~~~v~~l~fs~d~~~~~~l~~~ 245 (342)
.-..+.+..+ .++++-+.. .|.-+++-++... . +...+ .......-..+|..|+.-. .+..-
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg---viyvi 277 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLI 277 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT---EEEEE
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC---EEEEE
Confidence 6544444221 123444432 2223567777322 1 11111 1111112245678888777 89999
Q ss_pred eCCCcEEEEecCCCCC
Q 019349 246 SSSGSLHVFSPGFAIN 261 (342)
Q Consensus 246 s~dg~i~vwd~~~~~~ 261 (342)
+.-|.||+||++++..
T Consensus 278 TK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 278 TKYGYIHLYDLETGTC 293 (365)
T ss_dssp ETTSEEEEEETTTCCE
T ss_pred eCCcEEEEEEcccCcE
Confidence 9999999999998875
No 257
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.43 E-value=0.0009 Score=60.17 Aligned_cols=219 Identities=13% Similarity=0.183 Sum_probs=145.5
Q ss_pred EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEE-cCCeEE
Q 019349 30 FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLV 108 (342)
Q Consensus 30 ~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~ 108 (342)
+.|-|+.+........... ...-|.+..+.+++-++ +++.|+|+++.+.+..+.++..|.=-.| +++.+.
T Consensus 50 vvIiDl~~~~~~~rrpi~A-dsAIMnP~~~iiALrag--------~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~ 120 (494)
T 1bpo_A 50 VVIIDMNDPSNPIRRPISA-DSAIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 120 (494)
T ss_dssp EEEEETTSTTSCEEEECCC-SEEEECSSSSCEEEEET--------TEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEE
T ss_pred EEEEECCCCCcceeccccc-ceeeeCCCCcEEEEecC--------CeEEEEchHHhhhhcceecCCCceEEEecCCCeEE
Confidence 6777877654332222211 22345667778887764 6999999999999999998887766555 788888
Q ss_pred EEECCeEEEEECCCC-ceeeEEeCCCC--CceEEEEeeCCCccEEEEeCC-----CCccEEEEEEccCCceeEEEecccC
Q 019349 109 IVLREKTYIYDANTL-AILDTIDTVPN--LKGLCAFSPSLNACFLAVPAS-----TTKGSVLVYNVMELHSHCEIDAHQA 180 (342)
Q Consensus 109 ~~~d~~i~i~d~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-----~~~g~i~iwd~~~~~~~~~~~~h~~ 180 (342)
++++..|+-|++... .+++-++.+.+ ...++.+..+++..+++..|- ...|.+++|..+.. ..+.+++|..
T Consensus 121 lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 199 (494)
T 1bpo_A 121 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (494)
T ss_dssp EECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEE
T ss_pred EEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeee
Confidence 899999999999643 45555554432 356778888888888876651 13588999998764 4567888887
Q ss_pred CeeEEEECCCC---CEEEEEeCC--CcEEEEEEcCCC--------eeEEEeccC--cCceeEEEEEEecCCCcccEEEEE
Q 019349 181 PLAAIVLSSNG---MYIATASEQ--GTIIRVFLVSEA--------TKSYSFRRG--TYPSTIFSLSFGQSMQFQDILVAT 245 (342)
Q Consensus 181 ~v~~i~~s~dg---~~lat~s~d--g~~irlwd~~~~--------~~~~~~~~~--~~~~~v~~l~fs~d~~~~~~l~~~ 245 (342)
....+.+..+. +.++-+... |.-+++-++... ++...+.-. ....-..+|..|+... .+..-
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg---viyvi 276 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLI 276 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT---EEEEE
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC---EEEEE
Confidence 66555553221 244544432 223578887432 111111111 1112245688888877 89999
Q ss_pred eCCCcEEEEecCCCCC
Q 019349 246 SSSGSLHVFSPGFAIN 261 (342)
Q Consensus 246 s~dg~i~vwd~~~~~~ 261 (342)
+.-|.|++||++++..
T Consensus 277 TK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 277 TKYGYIHLYDLETGTC 292 (494)
T ss_dssp ETTSEEEEEETTTCCE
T ss_pred ecCceEEEEeccccee
Confidence 9999999999998875
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.42 E-value=0.0019 Score=63.93 Aligned_cols=232 Identities=11% Similarity=0.109 Sum_probs=142.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEe----------eCCEEEEEEcCCCCeEEEEcCCCCCCCCCC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA----------VGAFSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (342)
....|.++...++|..-+.....|+..|+..+++...-.. ...+..+.....++.+.+.+. ++
T Consensus 355 ~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~-------~~ 427 (795)
T 4a2l_A 355 SDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH-------AG 427 (795)
T ss_dssp SCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET-------TT
T ss_pred CCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC-------cC
Confidence 3457999999999985553344589999988775543211 123333333333442544442 46
Q ss_pred eEEEEECCCCcEEEEEe-----cCCceEEEEEcCC-eEEEEECCeEEEEECCCCceeeEEeC----CCCCceEEEEeeCC
Q 019349 76 RLCLFNTTTGTALRELN-----FLTSILAVRLNKK-RLVIVLREKTYIYDANTLAILDTIDT----VPNLKGLCAFSPSL 145 (342)
Q Consensus 76 ~i~iwd~~~~~~~~~~~-----~~~~v~~i~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~~~~ 145 (342)
-|.++|..+++...-.. ....|.++...++ .+.+++.+-+.+||..+++....... ......+.++..++
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 79999988876433221 1246888888764 56777777899999887644322111 01123466777777
Q ss_pred CccEEEEeCCCCccEEEEEEccCCceeEEEe-------cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEe
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELHSHCEID-------AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 218 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~-------~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~ 218 (342)
++.+.+... +.+..||..+.+. .+. .+...|.+|..+++|++.++.. .| + ..||..+++. ..+
T Consensus 508 ~g~lWigt~----~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~G-l-~~~d~~~~~~-~~~ 577 (795)
T 4a2l_A 508 HKRLWIGGE----EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EG-F-YCFNEKDKQI-KRY 577 (795)
T ss_dssp TCCEEEEES----SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SC-E-EEEETTTTEE-EEE
T ss_pred CCCEEEEeC----CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CC-c-eeECCCCCcE-EEe
Confidence 776665442 3488899877654 222 2345799999999998655443 45 4 5899877654 333
Q ss_pred cc--CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 219 RR--GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 219 ~~--~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.. +.....|.++...+++. +.+ ++. +-|..|+.++.
T Consensus 578 ~~~~gl~~~~i~~i~~d~~g~---lWi-~t~-~Gl~~~~~~~~ 615 (795)
T 4a2l_A 578 NTTNGLPNNVVYGILEDSFGR---LWL-STN-RGISCFNPETE 615 (795)
T ss_dssp CGGGTCSCSCEEEEEECTTSC---EEE-EET-TEEEEEETTTT
T ss_pred CCCCCCchhheEEEEECCCCC---EEE-EcC-CceEEEcCCCC
Confidence 21 11123488899888887 444 444 45777886543
No 259
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.37 E-value=0.00035 Score=61.38 Aligned_cols=177 Identities=14% Similarity=0.168 Sum_probs=113.4
Q ss_pred CCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe--------EEEEE--C---CeEEEEECC-CCceeeEEe-------C
Q 019349 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--------LVIVL--R---EKTYIYDAN-TLAILDTID-------T 131 (342)
Q Consensus 73 ~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--------~~~~~--d---~~i~i~d~~-~~~~~~~~~-------~ 131 (342)
..+-+.++|+ +|+.+..+.. ..+..+.+-+.. +++++ + ++|.+|++. ..+.+..+. +
T Consensus 48 k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 48 KKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCC
Confidence 3578999999 8999988864 566666665543 44555 4 589999773 222344442 2
Q ss_pred C-CCCceEEEEeeCCCcc-EEEEeCCCCccEEEEEEcc-------CCceeEEEecccCCeeEEEECCCCCEEEEEeCCCc
Q 019349 132 V-PNLKGLCAFSPSLNAC-FLAVPASTTKGSVLVYNVM-------ELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGT 202 (342)
Q Consensus 132 ~-~~~~~~~~~~~~~~~~-~l~~~~~~~~g~i~iwd~~-------~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~ 202 (342)
. ..+.++|.+.....+. +++..+ .+|.+..|++. +.+.+++|.. .+.+..+++.+...+|..+-++-.
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~--k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTG--KEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEEC--SSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCeeEEEEEecCCCCcEEEEEEC--CCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce
Confidence 2 3445554443222343 455555 57999999983 3356677765 356888899998899999999854
Q ss_pred EEEEEEcC-----CCeeEEEeccCcCceeEEEEEE--ecCCCcccEEEEEe-CCCcEEEEecC
Q 019349 203 IIRVFLVS-----EATKSYSFRRGTYPSTIFSLSF--GQSMQFQDILVATS-SSGSLHVFSPG 257 (342)
Q Consensus 203 ~irlwd~~-----~~~~~~~~~~~~~~~~v~~l~f--s~d~~~~~~l~~~s-~dg~i~vwd~~ 257 (342)
|..+|.+ +++.+..+..+.-...+..|++ .++++ .+|++++ .+++..|||.+
T Consensus 203 -Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~--gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 203 -IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK--GYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp -EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC--EEEEEEEGGGTEEEEEESS
T ss_pred -EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC--EEEEEEcCCCCEEEEEECC
Confidence 4456644 3556655533322335788888 45444 2666666 57799999986
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.36 E-value=0.00033 Score=69.32 Aligned_cols=231 Identities=10% Similarity=0.025 Sum_probs=139.8
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEee---------CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeE
Q 019349 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAV---------GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i 77 (342)
...|.++...++|... +|+.+|+.+||..+++...-... ..+..+.....+ .+.+.+ .++-|
T Consensus 262 ~~~i~~i~~d~~g~lW-igt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWigt-------~~~Gl 332 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLW-IGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-GMWLGT-------YFGGL 332 (795)
T ss_dssp CSBEEEEEECTTSCEE-EEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-CEEEEE-------SSSCE
T ss_pred CCeEEEEEEcCCCCEE-EEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-CEEEEE-------CCCCe
Confidence 4679999999999854 45566999999887765432211 223333332222 333333 24678
Q ss_pred EEEECCCCcEEEEEec--------CCceEEEEEcCC-eEEEEEC-CeEEEEECCCCceeeEEeCC------CCCceEEEE
Q 019349 78 CLFNTTTGTALRELNF--------LTSILAVRLNKK-RLVIVLR-EKTYIYDANTLAILDTIDTV------PNLKGLCAF 141 (342)
Q Consensus 78 ~iwd~~~~~~~~~~~~--------~~~v~~i~~~~~-~~~~~~d-~~i~i~d~~~~~~~~~~~~~------~~~~~~~~~ 141 (342)
..+|..+++.. .+.. ...|.++...++ .+.++++ +-+..|+..+++...-.... .....+.++
T Consensus 333 ~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i 411 (795)
T 4a2l_A 333 NYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAV 411 (795)
T ss_dssp EEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEE
T ss_pred EEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEE
Confidence 88887655422 2211 236889988766 5677774 58999998776543221111 112356777
Q ss_pred eeCCCcc-EEEEeCCCCccEEEEEEccCCceeEEEe----cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEE
Q 019349 142 SPSLNAC-FLAVPASTTKGSVLVYNVMELHSHCEID----AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY 216 (342)
Q Consensus 142 ~~~~~~~-~l~~~~~~~~g~i~iwd~~~~~~~~~~~----~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~ 216 (342)
..++++. +.+.. .++-|..||..+++...... .+...|.++...++|++.+.. ..| + .+||..+++..
T Consensus 412 ~~d~~g~~lWigt---~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l-~~~~~~~~~~~- 484 (795)
T 4a2l_A 412 YVDEKKSLVYIGT---HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-L-VRFNPEQRSFT- 484 (795)
T ss_dssp EEETTTTEEEEEE---TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-E-EEEETTTTEEE-
T ss_pred EEcCCCCEEEEEe---CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-e-eEEeCCCCeEE-
Confidence 7777776 44432 23559999988765432211 234579999999998865554 455 4 58998877543
Q ss_pred EeccC-----cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 217 SFRRG-----TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 217 ~~~~~-----~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.+... .....|.++...+++. +.+ |+. +-+..||.++.
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~---lWi-gt~-~Gl~~~~~~~~ 527 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKR---LWI-GGE-EGLSVFKQEGL 527 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCC---EEE-EES-SCEEEEEEETT
T ss_pred EccccccccccCCceEEEEEECCCCC---EEE-EeC-CceEEEeCCCC
Confidence 23211 1124589999999987 444 444 56888887543
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.34 E-value=0.0011 Score=57.47 Aligned_cols=226 Identities=10% Similarity=0.044 Sum_probs=123.2
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 8 YPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 8 ~~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
.....++|+++|+.+++...+ .+..||.+..........+....+.+..+.+. .++..+. ....|..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l-~vad~~~----~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDL-VATGWNA----DSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCE-EEEEECT----TSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcE-EEEeccC----CcceEEEEcCCCCe
Confidence 456789999999966666444 46888876543222212233334555556554 3333210 11247777877777
Q ss_pred EEEEEecCC--ceEEEEEcCCeE-EEEE--CCeEEEEECCCCce-eeEEe------C-CCCCceEEEEeeCCCccEEEEe
Q 019349 87 ALRELNFLT--SILAVRLNKKRL-VIVL--REKTYIYDANTLAI-LDTID------T-VPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 87 ~~~~~~~~~--~v~~i~~~~~~~-~~~~--d~~i~i~d~~~~~~-~~~~~------~-~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
.......+. ....++..++.. +++. .+.|+++|...++. +.... . .........+++ ++..|.++
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~--dg~~lyv~ 184 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR--FGNFLYVS 184 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--ETTEEEEE
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCc--CCCEEEEE
Confidence 544333322 233444444443 4443 56888888765421 11110 0 011112233443 44455555
Q ss_pred CCCCccEEEEEEccC-Cce--eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEE--EeccCcCceeEE
Q 019349 154 ASTTKGSVLVYNVME-LHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY--SFRRGTYPSTIF 228 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~-~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~--~~~~~~~~~~v~ 228 (342)
.. ..+.|..+|+.. ++. ...+.. ......|+++++|++.++....+++ .++|.. |+... .+..+ .....
T Consensus 185 d~-~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V-~~~~~~-G~~~~~~~~~~~--~~~p~ 258 (306)
T 2p4o_A 185 NT-EKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSV-VRIAPD-RSTTIIAQAEQG--VIGST 258 (306)
T ss_dssp ET-TTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCE-EEECTT-CCEEEEECGGGT--CTTEE
T ss_pred eC-CCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeE-EEECCC-CCEEEEeecccc--cCCce
Confidence 43 578999999864 321 122211 1345778999999887776666775 688874 65432 23211 13478
Q ss_pred EEEEe---cCCCcccEEEEEeCCC
Q 019349 229 SLSFG---QSMQFQDILVATSSSG 249 (342)
Q Consensus 229 ~l~fs---~d~~~~~~l~~~s~dg 249 (342)
+++|. ||+. .|.+++..+
T Consensus 259 ~~a~~g~~~d~~---~LyVt~~~~ 279 (306)
T 2p4o_A 259 AVAFGQTEGDCT---AIYVVTNGG 279 (306)
T ss_dssp EEEECCSTTTTT---EEEEEECTT
T ss_pred EEEEecccCCCC---EEEEECCCC
Confidence 99998 8876 666665543
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.34 E-value=0.00084 Score=63.92 Aligned_cols=234 Identities=11% Similarity=0.134 Sum_probs=135.7
Q ss_pred CCEEEEEcCCc-EEEEeCCCCcEEEEEeeCC------E---EEEE-EcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGA------F---SIVE-MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 19 ~~~la~g~~~g-~~v~d~~~~~~~~~~~~~~------~---~~~~-~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
+..+.+++.++ +.-+|..+|+++.+..... + ..+. -.......++++........++.|.-+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 34566666555 6888999998886654321 1 1111 0011121344432100000267999999999999
Q ss_pred EEEEecCCce------------------------------------------EEEEEc--CCeEEEEEC-----------
Q 019349 88 LRELNFLTSI------------------------------------------LAVRLN--KKRLVIVLR----------- 112 (342)
Q Consensus 88 ~~~~~~~~~v------------------------------------------~~i~~~--~~~~~~~~d----------- 112 (342)
+......... ..++++ .+.+++...
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 8876542100 012222 234555441
Q ss_pred --------------CeEEEEECCCCceeeEEeCCCCC-------ceEEEEeeC-CCc---cEEEEeCCCCccEEEEEEcc
Q 019349 113 --------------EKTYIYDANTLAILDTIDTVPNL-------KGLCAFSPS-LNA---CFLAVPASTTKGSVLVYNVM 167 (342)
Q Consensus 113 --------------~~i~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~---~~l~~~~~~~~g~i~iwd~~ 167 (342)
+.|..+|..+++.+..++...+. ...+.+... .++ ..++.++ .+|.+.++|..
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~--~~G~l~~lD~~ 354 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD--RNGFFYVVDRS 354 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC--TTSEEEEEETT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC--CCceEEEEECC
Confidence 47999999999999888664321 111222211 234 2455555 68999999999
Q ss_pred CCceeEEEeccc-------------CCe--------------------------------eEEEECCCCCEEEEEe----
Q 019349 168 ELHSHCEIDAHQ-------------APL--------------------------------AAIVLSSNGMYIATAS---- 198 (342)
Q Consensus 168 ~~~~~~~~~~h~-------------~~v--------------------------------~~i~~s~dg~~lat~s---- 198 (342)
+++.+..++... .++ ..++++|+..++....
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 998876554321 000 1356777655555443
Q ss_pred -----------------------------CCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCC
Q 019349 199 -----------------------------EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG 249 (342)
Q Consensus 199 -----------------------------~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg 249 (342)
.+|. +.-||+.+|+.+.+...+. .+..-.+...+. +++.++.||
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg---lvf~g~~dg 507 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGS-LRAMDPVSGKVVWEHKEHL---PLWAGVLATAGN---LVFTGTGDG 507 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEE-EEEECTTTCCEEEEEEESS---CCCSCCEEETTT---EEEEECTTS
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcce-EEEEECCCCCEEEEecCCC---CCcccceEeCCC---EEEEECCCC
Confidence 2465 4699999999887765332 111111222344 788899999
Q ss_pred cEEEEecCCCCC
Q 019349 250 SLHVFSPGFAIN 261 (342)
Q Consensus 250 ~i~vwd~~~~~~ 261 (342)
.++.||.++++.
T Consensus 508 ~l~A~D~~tG~~ 519 (582)
T 1flg_A 508 YFKAFDAKSGKE 519 (582)
T ss_dssp EEEEEETTTCCE
T ss_pred cEEEEECCCCCE
Confidence 999999998875
No 263
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.29 E-value=5.7e-05 Score=73.29 Aligned_cols=186 Identities=10% Similarity=0.056 Sum_probs=120.4
Q ss_pred CCeEEEEECCCCcEEEEEecCCc------------eEEEEEcCCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEE
Q 019349 74 PRRLCLFNTTTGTALRELNFLTS------------ILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~------------v~~i~~~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (342)
++.|..+|..+|+.+.++..... -..+.+..+.+++.+ ++.++.+|..+++.+.++......... .
T Consensus 75 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~-~ 153 (668)
T 1kv9_A 75 WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPY-S 153 (668)
T ss_dssp GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSC-B
T ss_pred CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcc-e
Confidence 67899999999999998865431 123445566666666 889999999999999887653211000 0
Q ss_pred EeeCC---CccEEEEeCCC----CccEEEEEEccCCceeEEEecc-------------------------------cCCe
Q 019349 141 FSPSL---NACFLAVPAST----TKGSVLVYNVMELHSHCEIDAH-------------------------------QAPL 182 (342)
Q Consensus 141 ~~~~~---~~~~l~~~~~~----~~g~i~iwd~~~~~~~~~~~~h-------------------------------~~~v 182 (342)
+...| ++ .++++... .+|.|..+|..+++.+-.+... ....
T Consensus 154 ~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w 232 (668)
T 1kv9_A 154 ITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVW 232 (668)
T ss_dssp CCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCC
T ss_pred ecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccc
Confidence 00011 23 33333210 2589999999999987666421 0112
Q ss_pred eEEEECCCCCEEEEEeCCCc------------------EEEEEEcCCCeeEEEeccCcCc-------eeEEEEEEecCCC
Q 019349 183 AAIVLSSNGMYIATASEQGT------------------IIRVFLVSEATKSYSFRRGTYP-------STIFSLSFGQSMQ 237 (342)
Q Consensus 183 ~~i~~s~dg~~lat~s~dg~------------------~irlwd~~~~~~~~~~~~~~~~-------~~v~~l~fs~d~~ 237 (342)
..++++|++.+++.++.++. .|..+|..+|+.+..++...+. .+.....+..+++
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 34789998889988887653 2469999999999888653221 2222223334553
Q ss_pred cccEEEEEeCCCcEEEEecCCCCC
Q 019349 238 FQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 238 ~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
....++.++.+|.++++|.++++.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEEEEECCCCEEEEEECCCCCE
Confidence 112588899999999999888764
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.0017 Score=64.08 Aligned_cols=234 Identities=13% Similarity=0.062 Sum_probs=139.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEe-----------eCCEEEEEEcCCCCeEEEEcCCCCCCCCC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-----------VGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (342)
+...|.++...++|..-+....+|+..|+..+.....-.. ...+..+....+ ..+.+.+. +
T Consensus 311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lWigt~-------~ 382 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQ-GKLWIGTD-------G 382 (781)
T ss_dssp SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTT-SCEEEEEB-------S
T ss_pred CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCC-CCEEEEeC-------C
Confidence 3457999999999985544447889999987664332211 122333332222 33444432 4
Q ss_pred CeEEEEECCCCcEEEEE---ec-CCceEEEEEcC-CeEEEEE-CCeEEEEECCCCceeeEEeC-CCCCceEEEEeeCCCc
Q 019349 75 RRLCLFNTTTGTALREL---NF-LTSILAVRLNK-KRLVIVL-REKTYIYDANTLAILDTIDT-VPNLKGLCAFSPSLNA 147 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~---~~-~~~v~~i~~~~-~~~~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 147 (342)
+-|..+|..+++...-. .. ...|.++...+ ..+.+++ ++-+..++..+++.. .+.. ......+.++..++++
T Consensus 383 ~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g 461 (781)
T 3v9f_A 383 GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNK 461 (781)
T ss_dssp SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTS
T ss_pred CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCC
Confidence 56888887654322110 11 24688888874 4577777 468999998776432 2221 1123457778777777
Q ss_pred cEEEEeCCCCccEEEEEEccCCceeEEEecc-----cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEecc--
Q 019349 148 CFLAVPASTTKGSVLVYNVMELHSHCEIDAH-----QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR-- 220 (342)
Q Consensus 148 ~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h-----~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~-- 220 (342)
.+.+... +.|..||..+++........ ...|.+|...++|++.+.....| + ..+|..+++. ..+..
T Consensus 462 ~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l-~~~~~~~~~~-~~~~~~~ 534 (781)
T 3v9f_A 462 KIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-V-GIYTPDMQLV-RKFNQYE 534 (781)
T ss_dssp EEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-E-EEECTTCCEE-EEECTTT
T ss_pred CEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-E-EEEeCCCCeE-EEccCCC
Confidence 6655432 44889998776543322222 36799999999998665443355 5 4788876643 33422
Q ss_pred CcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 221 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 221 ~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
+.....|.++...+++. |..++.+|-|..||.++.
T Consensus 535 ~l~~~~i~~i~~d~~g~----lWi~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 535 GFCSNTINQIYRSSKGQ----MWLATGEGLVCFPSARNF 569 (781)
T ss_dssp TCSCSCEEEEEECTTSC----EEEEETTEEEEESCTTTC
T ss_pred CCCCCeeEEEEECCCCC----EEEEECCCceEEECCCCC
Confidence 11123589999888887 444555666588887654
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=0.004 Score=55.99 Aligned_cols=235 Identities=6% Similarity=-0.074 Sum_probs=135.1
Q ss_pred EEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEE
Q 019349 11 FFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALR 89 (342)
Q Consensus 11 ~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~ 89 (342)
.|.+..+ ..+|+.+....++.+++.......... ......+.+....+.+.++.. ..+.|..++...+....
T Consensus 80 ~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEE 152 (386)
T ss_dssp CEEECSS-CCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCEEE
T ss_pred eECCccc-cceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCCcEE
Confidence 3555555 345666777778888887664433222 234445666666666666654 36789999987665433
Q ss_pred EEecC-CceEEEEEc--CCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEE
Q 019349 90 ELNFL-TSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVY 164 (342)
Q Consensus 90 ~~~~~-~~v~~i~~~--~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iw 164 (342)
.+... ....+++++ ...++++. .+.|.+.++........+... ......++.+|.+..|..+.....+.|..+
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~--l~~P~giavdp~~g~ly~td~~~~~~I~r~ 230 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--LEKPRAIALHPMEGTIYWTDWGNTPRIEAS 230 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS--CSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC--CCCCcEEEEEcCCCeEEEeccCCCCEEEEE
Confidence 33221 234566665 34555555 458888887644322222221 122344455554445555543123789999
Q ss_pred EccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEE
Q 019349 165 NVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA 244 (342)
Q Consensus 165 d~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~ 244 (342)
++............-...+.|+|+|++..|..+......|..+|+..... ..+... .......|++ .++. ++.+
T Consensus 231 ~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~-~~~~P~giav-~~~~---ly~t 304 (386)
T 3v65_B 231 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQ-GLPHPFAITV-FEDS---LYWT 304 (386)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECS-SCSSEEEEEE-ETTE---EEEE
T ss_pred eCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEEC-CCCCceEEEE-ECCE---EEEe
Confidence 87654333333333445789999987777777665555567888754332 222221 1234677888 3444 6667
Q ss_pred EeCCCcEEEEecCCCC
Q 019349 245 TSSSGSLHVFSPGFAI 260 (342)
Q Consensus 245 ~s~dg~i~vwd~~~~~ 260 (342)
-...+.|..++..+++
T Consensus 305 d~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 305 DWHTKSINSANKFTGK 320 (386)
T ss_dssp ETTTTEEEEEETTTCC
T ss_pred eCCCCeEEEEECCCCc
Confidence 7778889998854443
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.011 Score=58.36 Aligned_cols=234 Identities=10% Similarity=0.003 Sum_probs=138.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-cEEEEeCCCCcEEEEE-e---e-----CCEEEEEEcCC-CCeEEEEcCCCCCCCCCC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYER-A---V-----GAFSIVEMLYS-SSLLAIVGAGEQPSLSPR 75 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~-g~~v~d~~~~~~~~~~-~---~-----~~~~~~~~~~~-~~~~~~~~~g~~~~~~d~ 75 (342)
...|.++.-.++|..|-+|+.+ |+..||..+.+...-. . . ..+..+..... ...+.+.+. .+
T Consensus 65 ~n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~-------~~ 137 (781)
T 3v9f_A 65 GNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTY-------YR 137 (781)
T ss_dssp CSCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEES-------SS
T ss_pred ccccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEEC-------CC
Confidence 4579999999999845567777 9999999877654321 1 0 12333332220 234444432 35
Q ss_pred eEEEEECCCCcEEEEEec-------CCceEEEEEc-CCeEEEEECC-eEEEEECCCCceeeEEeC-CC-----CCceEEE
Q 019349 76 RLCLFNTTTGTALRELNF-------LTSILAVRLN-KKRLVIVLRE-KTYIYDANTLAILDTIDT-VP-----NLKGLCA 140 (342)
Q Consensus 76 ~i~iwd~~~~~~~~~~~~-------~~~v~~i~~~-~~~~~~~~d~-~i~i~d~~~~~~~~~~~~-~~-----~~~~~~~ 140 (342)
.|..+|.++++.. .+.. ...|.++... ...+.+++.+ -+..||..+.+... +.. .. ....+.+
T Consensus 138 gl~~~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~ 215 (781)
T 3v9f_A 138 GIEYLDIATGKFT-HYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKH-FVHDPQNPNSLPGNDVRC 215 (781)
T ss_dssp CEEEEETTTTEEE-EESTTTCTTCSCCCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEE-ECC--------CCSSEEE
T ss_pred CeeEEECCCCeEE-eeccCcccCCCccceEEEEECCCCCEEEEecCCCeEEEcCCCCceEe-eecCCCCcccCCCCceeE
Confidence 6888998766543 3321 2357888775 4567777744 89999987764432 211 00 1234667
Q ss_pred EeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEe-------cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe
Q 019349 141 FSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEID-------AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT 213 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~-------~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~ 213 (342)
+..++++.+.+... + -+.+||..+.+...... .....|.+|...++|.+. .|+..+.+ .++|..+++
T Consensus 216 i~~d~~g~lwigt~---~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~~Gl-~~~~~~~~~ 289 (781)
T 3v9f_A 216 IYKDTNGNIWIGTS---K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLW-IATELNGI-MILDLQQNQ 289 (781)
T ss_dssp EEECTTCCEEEEET---T-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEE-EEESSSCE-EEEETTCC-
T ss_pred EEEcCCCCEEEEeC---C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEE-EEeCCCCe-EEECCCCCe
Confidence 77777776666543 3 48999987665332111 123569999998888754 45552334 589987765
Q ss_pred eEEEec------------cCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 214 KSYSFR------------RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 214 ~~~~~~------------~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
...-.. .......|.++...+++. |-.|+.++-|..|+....
T Consensus 290 ~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~----lWigt~~~Gl~~~~~~~~ 343 (781)
T 3v9f_A 290 FLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN----IWIGTWGGGINFISNAPP 343 (781)
T ss_dssp --------CEEECBCSSTTSBSSSCEEEEEECSSCC----EEEEEBSSCEEEECSSCC
T ss_pred eeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC----EEEEecCCeEEEeCCCCC
Confidence 321110 011123589999888886 667777778888886543
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.05 E-value=0.00054 Score=67.38 Aligned_cols=244 Identities=10% Similarity=-0.010 Sum_probs=123.0
Q ss_pred CeEEEEEc-CCCCEEEEEcCC------cEEEEeCCCC-cEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEE
Q 019349 9 PVFFVSFN-QDNSGFALSTKD------GFKIFDSSTG-RLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (342)
Q Consensus 9 ~V~~l~fs-~d~~~la~g~~~------g~~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iw 80 (342)
.+...+|| |||++||-+.+. .++++|++++ +.+...-........|.++++.++++..... .....|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~--~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDET--LRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTT--CCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCC--CCCCEEEEE
Confidence 57789999 999998855432 2788899988 6321100011123467777778877754210 012478999
Q ss_pred ECCCCcE--EEEEec--CCceEEEEEcCCe--EEEEE----CCeEEEEECCCCc-ee--eEEeCCCCCceEEEEeeCCCc
Q 019349 81 NTTTGTA--LRELNF--LTSILAVRLNKKR--LVIVL----REKTYIYDANTLA-IL--DTIDTVPNLKGLCAFSPSLNA 147 (342)
Q Consensus 81 d~~~~~~--~~~~~~--~~~v~~i~~~~~~--~~~~~----d~~i~i~d~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 147 (342)
++.+++. ...+.. ......+.+++++ +++.. ...|+++|+.++. .. ..+.. ..........++.++
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP-REKGVRYDVQMHGTS 331 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-CCTTCCEEEEEETTT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-CCCCceEEEeeeeCC
Confidence 9987642 222222 2345677888875 44433 2378999998752 12 22221 111222333322223
Q ss_pred cEEEEeCCC--CccEEEEEEccCCceeEE-EecccC--CeeEEEECCCCCEEEEEeCCCcE-EEEEEc-------CCCee
Q 019349 148 CFLAVPAST--TKGSVLVYNVMELHSHCE-IDAHQA--PLAAIVLSSNGMYIATASEQGTI-IRVFLV-------SEATK 214 (342)
Q Consensus 148 ~~l~~~~~~--~~g~i~iwd~~~~~~~~~-~~~h~~--~v~~i~~s~dg~~lat~s~dg~~-irlwd~-------~~~~~ 214 (342)
.+++....+ ....|..+|+.++..... +-.|.. .+..+.+. .+.++++...+|.. +.++|+ ..++.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~ 410 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTG 410 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCcc
Confidence 333333321 234677788765322222 333433 34555554 23455666666642 345564 33331
Q ss_pred EEEeccCcCceeEEEEEE----ecCCCcccEEEEEeCC---CcEEEEecCCC
Q 019349 215 SYSFRRGTYPSTIFSLSF----GQSMQFQDILVATSSS---GSLHVFSPGFA 259 (342)
Q Consensus 215 ~~~~~~~~~~~~v~~l~f----s~d~~~~~~l~~~s~d---g~i~vwd~~~~ 259 (342)
+..+... ....+..+.+ ++++. .++++.+.. .+++.+|+.++
T Consensus 411 ~~~l~l~-~~~~~~~~~~~~~~~~~~~--~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 411 LREVVME-EPIFTVHLVESQMLEYEEP--TFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp CEECCCC-CSSCEEEECGGGCCCTTCS--CEEEEEEETTEEEEEEEECTTTC
T ss_pred ceEECCC-CceeEEEeccCcccCCCCC--EEEEEEeCCCCCCEEEEEECCCC
Confidence 3443211 1112333433 34554 155554443 34677776654
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.03 E-value=0.0063 Score=53.87 Aligned_cols=236 Identities=6% Similarity=-0.084 Sum_probs=135.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~ 87 (342)
...|.+..++ ..|..+....++..+++......... ......+.+....+.+.++.. ..+.|..++...+..
T Consensus 35 ~~~C~~~~~~-~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNV 107 (349)
T ss_dssp SSCEEESSSC-CEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSC
T ss_pred CCcccccccC-ceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec------cCCceEEEecCCCCc
Confidence 3456666663 45666666778778877654433222 234445566666666666654 367899999876553
Q ss_pred EEEEecC-CceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCc-cEE
Q 019349 88 LRELNFL-TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTK-GSV 161 (342)
Q Consensus 88 ~~~~~~~-~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-g~i 161 (342)
...+... ....++++++ ..++++. .+.|.+.++........+... ......++.+|.+..|..+.. .. +.|
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~--l~~P~~iavdp~~g~ly~td~-~~~~~I 184 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--LEKPRAIALHPMEGTIYWTDW-GNTPRI 184 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT--CSCEEEEEEETTTTEEEEEEC-SSSCEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC--CCCcceEEEecCcCeEEEecc-CCCCEE
Confidence 3333221 2456677763 4555555 468999998654322222221 122344455554445555543 34 789
Q ss_pred EEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccE
Q 019349 162 LVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDI 241 (342)
Q Consensus 162 ~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~ 241 (342)
..+++........+...-...+.|+++|++..|..+......|..+|+.... ...+... .......|++ .++. +
T Consensus 185 ~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~-~~~~P~giav-~~~~---l 258 (349)
T 3v64_C 185 EASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQ-GLPHPFAITV-FEDS---L 258 (349)
T ss_dssp EEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS-SCSSEEEEEE-ETTE---E
T ss_pred EEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEeC-CCCCceEEEE-ECCE---E
Confidence 9998764332222222334578999999777777776555556888876432 2222211 1234577888 3454 6
Q ss_pred EEEEeCCCcEEEEecCCCC
Q 019349 242 LVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 242 l~~~s~dg~i~vwd~~~~~ 260 (342)
+.+-...+.|..++-.+++
T Consensus 259 y~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 259 YWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEecCCCCeEEEEEccCCC
Confidence 6666677889888854443
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.99 E-value=0.0066 Score=52.88 Aligned_cols=227 Identities=7% Similarity=-0.055 Sum_probs=128.9
Q ss_pred EEEEEcCCcEEEEeCCCCcEEEEE-eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC---CcEEE-EEecC-
Q 019349 21 GFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT---GTALR-ELNFL- 94 (342)
Q Consensus 21 ~la~g~~~g~~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~---~~~~~-~~~~~- 94 (342)
+|+.+..+.++..|+++.+..... .......+.+....+.+.++.. ..+.|..+|+.. +.... .+...
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSSC
T ss_pred EEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 567777788999998876543322 2233444556555666666654 368899999875 12222 22211
Q ss_pred CceEEEEEc--CCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc
Q 019349 95 TSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (342)
Q Consensus 95 ~~v~~i~~~--~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~ 170 (342)
....+++++ ...++++. .+.|.++++........+.... .....++.+|.+..|..+.....+.|...++....
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT--CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCC--CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 245677775 34566655 5689999986543322222211 12334455554444444442123788888875432
Q ss_pred eeEEE-ecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-cCceeEEEEEEecCCCcccEEEEEeCC
Q 019349 171 SHCEI-DAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSS 248 (342)
Q Consensus 171 ~~~~~-~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-~~~~~v~~l~fs~d~~~~~~l~~~s~d 248 (342)
...+ ...-...+.|++++++..|..+......|..+|+.. .....+... ........|++. .+. ++.+-...
T Consensus 155 -~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~---ly~~d~~~ 228 (316)
T 1ijq_A 155 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDK---VFWTDIIN 228 (316)
T ss_dssp -EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTE---EEEEETTT
T ss_pred -eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE-CCE---EEEEECCC
Confidence 2222 223345789999998877777665544568899863 332333211 112235678885 344 66666777
Q ss_pred CcEEEEecCCCCC
Q 019349 249 GSLHVFSPGFAIN 261 (342)
Q Consensus 249 g~i~vwd~~~~~~ 261 (342)
+.|..++..+++.
T Consensus 229 ~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 229 EAIFSANRLTGSD 241 (316)
T ss_dssp TEEEEEETTTCCC
T ss_pred CeEEEEeCCCCcc
Confidence 8899998765543
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.95 E-value=0.01 Score=53.56 Aligned_cols=229 Identities=7% Similarity=-0.058 Sum_probs=132.5
Q ss_pred CEEEEEcCCcEEEEeCCCCcEEEEE-eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC----cEEEEEe-c
Q 019349 20 SGFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG----TALRELN-F 93 (342)
Q Consensus 20 ~~la~g~~~g~~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~----~~~~~~~-~ 93 (342)
.+|+.+....++..+++........ .......+++....+.+.++.. ..+.|..+++... .....+. .
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECSS
T ss_pred ceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeCC
Confidence 4666677778888888776433222 2344555666666666666654 3678888887652 1222222 2
Q ss_pred CCceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCC
Q 019349 94 LTSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL 169 (342)
Q Consensus 94 ~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~ 169 (342)
.....+++++. ..++++. .+.|.+.++........+..... ...+++.+|.+..|..+.....+.|...++...
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~--~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC--CEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC--CcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 23567777764 4566655 46899998875543333332212 233445555444554443213477888888654
Q ss_pred ceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-cCceeEEEEEEecCCCcccEEEEEeCC
Q 019349 170 HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSS 248 (342)
Q Consensus 170 ~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-~~~~~v~~l~fs~d~~~~~~l~~~s~d 248 (342)
.....+...-...+.|++++++..|..+......|+.+|+... ....+... .......+|++. .+. ++.+-...
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~l~~P~gl~v~-~~~---lywtd~~~ 310 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDK---VFWTDIIN 310 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-CCEEEEECSSTTSSEEEEEEE-TTE---EEEEESSS
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC-ccEEEEeCCCCCCCCEEEEEe-CCE---EEEecCCC
Confidence 4333333333567899999988888877655555788898543 33333221 112235677774 334 66666777
Q ss_pred CcEEEEecCCCCC
Q 019349 249 GSLHVFSPGFAIN 261 (342)
Q Consensus 249 g~i~vwd~~~~~~ 261 (342)
+.|..+|..+++.
T Consensus 311 ~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 311 EAIFSANRLTGSD 323 (400)
T ss_dssp CSEEEEESSSCCC
T ss_pred CeEEEEEcCCCCc
Confidence 8899998655543
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.012 Score=53.82 Aligned_cols=239 Identities=7% Similarity=0.011 Sum_probs=128.1
Q ss_pred CeEEEEEcC-CCCEEEEEcC-CcEEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC
Q 019349 9 PVFFVSFNQ-DNSGFALSTK-DGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (342)
Q Consensus 9 ~V~~l~fs~-d~~~la~g~~-~g~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~ 85 (342)
....|+|+| ++..|.++.. ..++.+|++.+++..... ......+.+..+.+.+.++..+.. .....+...+ ..+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~-~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN--NDRPNNYILT-RES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC--TTSEEEEEEE-GGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC--cccceEEEEe-CCC
Confidence 456889998 4555655544 557889988776543322 233455677777775655543210 0011233333 333
Q ss_pred cEE--EEEecCCceEEEEEcC-Ce-EEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCcc
Q 019349 86 TAL--RELNFLTSILAVRLNK-KR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (342)
Q Consensus 86 ~~~--~~~~~~~~v~~i~~~~-~~-~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 159 (342)
... ..+.......++++++ +. ++++. .++|+.++...+.......... ......++.++++.+|..+.. ..+
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~-~~~ 292 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVV-NQH 292 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEET-TTT
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEEC-CCC
Confidence 221 2222223456777887 44 44444 5799999998765422222211 122345566777775555543 578
Q ss_pred EEEEEEccC--Cce--eEEEecc---------------cCCee-EEEEC--------CCCCEEEEEeCCCcEEEEEEcCC
Q 019349 160 SVLVYNVME--LHS--HCEIDAH---------------QAPLA-AIVLS--------SNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 160 ~i~iwd~~~--~~~--~~~~~~h---------------~~~v~-~i~~s--------~dg~~lat~s~dg~~irlwd~~~ 211 (342)
.|..++... ++. ...+.+. -.... .+++. ++|.+.++-...++ |+.++ .+
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~-~~ 370 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT-PQ 370 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC-TT
T ss_pred EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC-CC
Confidence 899988653 221 1222211 01122 45553 44655555444444 67888 46
Q ss_pred CeeEEEecc------Cc-C--------ceeEEEEEEecC-CCcccEEEEEeCCCcEEEEecC
Q 019349 212 ATKSYSFRR------GT-Y--------PSTIFSLSFGQS-MQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 212 ~~~~~~~~~------~~-~--------~~~v~~l~fs~d-~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
|+....... +. . -.....|+++|+ +. ++++-...+.|+.++++
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~---lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEEREC---FFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTE---EEEEEGGGTEEEEEEEC
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCE---EEEEECCCCeEEEEccC
Confidence 654333211 00 0 013688999994 65 66666667789988864
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.93 E-value=0.012 Score=53.74 Aligned_cols=239 Identities=10% Similarity=0.075 Sum_probs=129.8
Q ss_pred CeEEEEEcCC--CCEEEEEcC-CcEEEEeCCCCcEEEEEe-eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 9 PVFFVSFNQD--NSGFALSTK-DGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 9 ~V~~l~fs~d--~~~la~g~~-~g~~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
....|+|+|+ +..|.++.. ..++.+|+.++++..... ......+.+..+++ +.++..+.. .....+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~--~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSS--DTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSC--TTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCC--cccceEEEEECCC
Confidence 3568999995 444555543 568889988776654322 23345566767777 444332100 0012233333322
Q ss_pred CcE-EEEEecCCceEEEEEcC-Ce-EEEEE--CCeEEEEECCCCceeeEE-eCCCCCceEEEEeeCCCccEEEEeCCCCc
Q 019349 85 GTA-LRELNFLTSILAVRLNK-KR-LVIVL--REKTYIYDANTLAILDTI-DTVPNLKGLCAFSPSLNACFLAVPASTTK 158 (342)
Q Consensus 85 ~~~-~~~~~~~~~v~~i~~~~-~~-~~~~~--d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 158 (342)
+.. ...+..-.....+++++ +. ++++. .+.|+.++..++.....+ ..... .....++.++++..|..+.. ..
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~-~~~~~ia~dpdG~~LYvad~-~~ 294 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK-GSNFHIVWHPTGDWAYIIYN-GK 294 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC-SSCEEEEECTTSSEEEEEET-TT
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC-CCcccEEEeCCCCEEEEEeC-CC
Confidence 211 01111123445677777 44 44444 468999998877653333 22222 12224666777765555544 47
Q ss_pred cEEEEEEcc--CCce--eEEEecc---------------cCCeeEEEE---------CCCCCEEEEEeCCCcEEEEEEcC
Q 019349 159 GSVLVYNVM--ELHS--HCEIDAH---------------QAPLAAIVL---------SSNGMYIATASEQGTIIRVFLVS 210 (342)
Q Consensus 159 g~i~iwd~~--~~~~--~~~~~~h---------------~~~v~~i~~---------s~dg~~lat~s~dg~~irlwd~~ 210 (342)
+.|+.++.. ++.. ...+.+. -.....|++ .++|++.++-...++ |+.++.
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~~- 372 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLTP- 372 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEECT-
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEECC-
Confidence 899998865 2221 1222221 123567999 777776666555554 688884
Q ss_pred CCeeEEEeccCc------C---------ceeEEEEEEe-cCCCcccEEEEEeCCCcEEEEecC
Q 019349 211 EATKSYSFRRGT------Y---------PSTIFSLSFG-QSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 211 ~~~~~~~~~~~~------~---------~~~v~~l~fs-~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
+|......-.+. . -.....|+++ +++. ++++-...+.|+.++++
T Consensus 373 ~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~---lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC---FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE---EEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE---EEEEeCCCCEEEEEecC
Confidence 665432221110 0 1126789999 6676 66666777889988865
No 273
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.90 E-value=0.005 Score=53.64 Aligned_cols=174 Identities=11% Similarity=0.086 Sum_probs=100.3
Q ss_pred CCeEEEEECCCCcEEEEEec---------------------CCceEEEEEcC-C-eEEEEE-CCeEEEEECCCCceeeEE
Q 019349 74 PRRLCLFNTTTGTALRELNF---------------------LTSILAVRLNK-K-RLVIVL-REKTYIYDANTLAILDTI 129 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~---------------------~~~v~~i~~~~-~-~~~~~~-d~~i~i~d~~~~~~~~~~ 129 (342)
++.|..||..+++.. .+.. ...+.++++.+ + .++++. .+.+..+|..+++. ..+
T Consensus 39 ~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~ 116 (322)
T 2fp8_A 39 DGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQL 116 (322)
T ss_dssp TSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEEC-EEE
T ss_pred CCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEE-EEe
Confidence 678888988765433 2221 12478888885 4 566665 45688888765432 222
Q ss_pred eCCC---CCceEEEEeeCC-CccEEEEeCC---------------CCccEEEEEEccCCceeEEEecccCCeeEEEECCC
Q 019349 130 DTVP---NLKGLCAFSPSL-NACFLAVPAS---------------TTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSN 190 (342)
Q Consensus 130 ~~~~---~~~~~~~~~~~~-~~~~l~~~~~---------------~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~d 190 (342)
.... .......+..++ ++.+.++... ..+|.|..||..+++...... .....+.|+++|+
T Consensus 117 ~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~d 195 (322)
T 2fp8_A 117 ATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSAD 195 (322)
T ss_dssp ESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTT
T ss_pred cccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCC
Confidence 2111 111234556667 6666554321 124789999987765432222 2234578999999
Q ss_pred CCEEEEE-eCCCcEEEEEEcCCCe--eEEEeccCcCceeEEEEEEecCCCcccEEEEEeC----------CCcEEEEecC
Q 019349 191 GMYIATA-SEQGTIIRVFLVSEAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPG 257 (342)
Q Consensus 191 g~~lat~-s~dg~~irlwd~~~~~--~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~----------dg~i~vwd~~ 257 (342)
|+.|..+ +..++ |..|++.... ....+.. .+. ...|++.++|. ++++... .+.|..+|.+
T Consensus 196 g~~lyv~d~~~~~-I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~---l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 196 SSFVLVAEFLSHQ-IVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGH---FWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp SSEEEEEEGGGTE-EEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSC---EEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCEEEEEeCCCCe-EEEEECCCCcCCccceEEe--CCC-CCCeEECCCCC---EEEEecCcccccccCCCccEEEEECCC
Confidence 9876655 44455 5788886421 1112211 122 57789999998 6665544 4567777643
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.89 E-value=0.0083 Score=50.50 Aligned_cols=158 Identities=14% Similarity=0.088 Sum_probs=99.3
Q ss_pred CceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc
Q 019349 95 TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (342)
Q Consensus 95 ~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~ 170 (342)
..+.++++++ +.++++. ++.|...|.. ++.++.+..... ...-.++..+++.++++.. .++.+.++++....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E--~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDE--RDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEET--TTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEEC--CCCcEEEEEcCCCC
Confidence 4688899986 4566666 4588888887 888888754321 2344555667776655544 46889999876543
Q ss_pred e---eEEEe------cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcC---CCeeEEEec-----cCcCceeEEEEEEe
Q 019349 171 S---HCEID------AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVS---EATKSYSFR-----RGTYPSTIFSLSFG 233 (342)
Q Consensus 171 ~---~~~~~------~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~---~~~~~~~~~-----~~~~~~~v~~l~fs 233 (342)
. +.... .+......|+++|+++.|.++.+.+.. .+|.+. ....+..+. .......+.+++++
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~-~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPI-EVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSE-EEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCc-eEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 2 22221 123456899999999888888876652 455553 111112111 11112246889999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 234 QSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 234 ~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
|... ++++.......+.++|.+..
T Consensus 182 p~tg--~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 182 QQKN--TLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp TTTT--EEEEEETTTTEEEEECTTCC
T ss_pred CCCC--eEEEEECCCCeEEEEcCCCC
Confidence 9765 36777777778999987644
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.88 E-value=0.013 Score=52.57 Aligned_cols=177 Identities=11% Similarity=-0.070 Sum_probs=103.5
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCC-CCceEEEEeeCCCcc
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVP-NLKGLCAFSPSLNAC 148 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 148 (342)
.+.|+..++..+.....+.....+.++++++ ..++++. .+.|+.+++........+.... .+.+ .++.+. +.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g-lavd~~--~g 171 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG-LAVDWV--HD 171 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCC-EEEETT--TT
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccE-EEEEeC--CC
Confidence 4678888887766554444455688899874 3455554 5689999987654333333222 2222 344433 23
Q ss_pred EEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCC-cEEEEEEcCCCeeEEEeccCcCceeE
Q 019349 149 FLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQG-TIIRVFLVSEATKSYSFRRGTYPSTI 227 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg-~~irlwd~~~~~~~~~~~~~~~~~~v 227 (342)
.|..+.. ..+.|.+.++........+.......+.|+++|++..|..+.... ..|..+++. |.....+... .....
T Consensus 172 ~lY~~d~-~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~-~~~~P 248 (386)
T 3v65_B 172 KLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIADT-HLFWP 248 (386)
T ss_dssp EEEEEET-TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECS-SCSCE
T ss_pred eEEEEcC-CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC-CCCcEEEEEC-CCCCe
Confidence 3433333 467899888865443333333345678999998766655554332 235677765 3332333211 12236
Q ss_pred EEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 228 FSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
..|+|+|++. .+..+-+..+.|..+|++.
T Consensus 249 nGlavd~~~~--~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 249 NGLTIDYAGR--RMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEEGGGT--EEEEEETTTTEEEEECTTS
T ss_pred eeEEEeCCCC--EEEEEECCCCEEEEEeCCC
Confidence 7899998765 1445556677899999864
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.85 E-value=0.0095 Score=52.33 Aligned_cols=184 Identities=13% Similarity=0.236 Sum_probs=108.4
Q ss_pred EEcCCcEEEEeCCCCcEEEEEeeCCEEEEEEcCC----CCe--EEEEcCCCCCCCC--CCeEEEEEC--CCCcEEEEEec
Q 019349 24 LSTKDGFKIFDSSTGRLCYERAVGAFSIVEMLYS----SSL--LAIVGAGEQPSLS--PRRLCLFNT--TTGTALRELNF 93 (342)
Q Consensus 24 ~g~~~g~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~g~~~~~~--d~~i~iwd~--~~~~~~~~~~~ 93 (342)
+.-..|+.+||+ +|+++.....+.+.-+.+.+. +.. +++++.. . +++|.++++ .+++ +..+..
T Consensus 46 t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R-----~~~~n~l~vf~iDp~~~~-l~~i~~ 118 (355)
T 3amr_A 46 TNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNR-----SEGKNTIEIYAIDGKNGT-LQSMTD 118 (355)
T ss_dssp EETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEEC-----STTCCEEEEEEECTTTCC-EEECSC
T ss_pred EcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCC-----CCCCCeEEEEEECCCCCc-eeeccc
Confidence 334457999999 777776665555555555442 111 4555542 4 689999966 4443 544421
Q ss_pred ---C-----CceEEEEE--cCC-e--EEEEE--CCeEEEEECC-------CCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 94 ---L-----TSILAVRL--NKK-R--LVIVL--REKTYIYDAN-------TLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 94 ---~-----~~v~~i~~--~~~-~--~~~~~--d~~i~i~d~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
+ ..+..+++ ++. . .+++. ++.+..|++. +.++++++.....+. .+..++....|.
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E---gcvvDd~~g~Ly 195 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTE---GMAADDEYGRLY 195 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE---EEEEETTTTEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcc---eEEEcCCCCeEE
Confidence 1 45677777 542 2 23344 6788888882 236678887755432 333344444666
Q ss_pred EeCCCCccEEEEEEcc-----CCceeEEEe-cc-cCCeeEEEE--CCCCC-EEEEEeCCCcEEEEEEcC-CCeeEEEec
Q 019349 152 VPASTTKGSVLVYNVM-----ELHSHCEID-AH-QAPLAAIVL--SSNGM-YIATASEQGTIIRVFLVS-EATKSYSFR 219 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~-----~~~~~~~~~-~h-~~~v~~i~~--s~dg~-~lat~s~dg~~irlwd~~-~~~~~~~~~ 219 (342)
++- .+..|..+|.+ +++.+..+. +| ...+..|++ .++|+ +|+++|+....+.+||.. +.+.+..|+
T Consensus 196 v~e--Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAE--EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEE--TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred Eec--ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 655 34447667754 344454442 22 246888888 56666 777777443335799996 667777775
No 277
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.021 Score=52.76 Aligned_cols=246 Identities=6% Similarity=0.010 Sum_probs=131.4
Q ss_pred CeEEEEEcC-CCCEEEEEcCC--cEEEEeCCCCcEEEEEeeC-----CEEEEEE-------cCCCCeEEEEcCCCCCCCC
Q 019349 9 PVFFVSFNQ-DNSGFALSTKD--GFKIFDSSTGRLCYERAVG-----AFSIVEM-------LYSSSLLAIVGAGEQPSLS 73 (342)
Q Consensus 9 ~V~~l~fs~-d~~~la~g~~~--g~~v~d~~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~~~~~~g~~~~~~ 73 (342)
....|+|+| ++..|.++... .+++.|++.+.+..-...+ ....+.+ ..+.+.+.+..........
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467999999 45556555443 4688888887665433222 2455666 6666656555442100000
Q ss_pred CCeEEEEECCC-CcEE-----EEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECC-------CCce-----------
Q 019349 74 PRRLCLFNTTT-GTAL-----RELNFLTSILAVRLNK--KRLVIVL--REKTYIYDAN-------TLAI----------- 125 (342)
Q Consensus 74 d~~i~iwd~~~-~~~~-----~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~-------~~~~----------- 125 (342)
...|.+.+... +... ..+..-.....+++++ ..++++. .+.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 12366665333 1211 1111112334667777 3455555 5689999987 5543
Q ss_pred eeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEcc--CCce--eEEEecc------c---------CCee-EE
Q 019349 126 LDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVM--ELHS--HCEIDAH------Q---------APLA-AI 185 (342)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~--~~~~--~~~~~~h------~---------~~v~-~i 185 (342)
...+-..........++.+|++..|..+.. ....|+.+|.. .+.. ..++-+. . .... .+
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~-~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVI-NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEET-TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeC-CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 223211111122345667777775555543 46889996653 3221 1222221 0 1233 45
Q ss_pred EEC-------CCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-------------cCc---------eeEEEEEEecC-
Q 019349 186 VLS-------SNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-------------TYP---------STIFSLSFGQS- 235 (342)
Q Consensus 186 ~~s-------~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-------------~~~---------~~v~~l~fs~d- 235 (342)
+.. ++|.+.++=+... .||.++ .+|. +.++... ... .....|+++++
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~-rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNF-CVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGT-EEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEccccccccCCCeEEEEECCCC-EEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 554 4566555544444 468888 4664 3444211 001 12678999997
Q ss_pred CCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 236 MQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 236 ~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
+. ++++=+..+.|+.++++....
T Consensus 456 g~---lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 456 EM---FYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TE---EEEEETTTTEEEEEEECCCC-
T ss_pred CE---EEEEeCCCCEEEEEECCCCcc
Confidence 76 666667778899999876543
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.80 E-value=0.012 Score=49.62 Aligned_cols=197 Identities=11% Similarity=0.055 Sum_probs=120.2
Q ss_pred CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC--CceEEEEEcCCeEE-EEE--CCeEEEEECC
Q 019349 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL--TSILAVRLNKKRLV-IVL--REKTYIYDAN 121 (342)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~i~~~~~~~~-~~~--d~~i~i~d~~ 121 (342)
..+.-+.+.++.+.++.+.. .++.|...|.. ++.+..+.+. ...-+|++.++..+ ++. ++.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN------KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE------TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEEC------CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34566677777777777776 37889999987 8888888765 37788888776555 444 5689999886
Q ss_pred CCc---eeeEEeCC----CCCceEEEEeeCCCccEEEEeCCCCccEEEEEEc-cCCceeEEEe-------cccCCeeEEE
Q 019349 122 TLA---ILDTIDTV----PNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNV-MELHSHCEID-------AHQAPLAAIV 186 (342)
Q Consensus 122 ~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~-~~~~~~~~~~-------~h~~~v~~i~ 186 (342)
... .+...... ....+.-+++.++.+..|.++.-.....|..|+- .....+..+. .+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 543 23344321 2234567778877664444433111224555551 1111222221 1334678999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEecc--CcC-----ceeEEEEEEecCCCcccEEEEEeCCCcEEEEe
Q 019349 187 LSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR--GTY-----PSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 255 (342)
Q Consensus 187 ~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~--~~~-----~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd 255 (342)
++|....|..-|.....+-.+|.. |+.+..+.- +.+ ...-..|+|.++|+ |...|+-+.+++|.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~----lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN----IYIVSEPNRFYRFT 250 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC----EEEEETTTEEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC----EEEEcCCceEEEEE
Confidence 999666655556555556688865 555544432 211 11367899999998 44558888777775
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.77 E-value=0.008 Score=51.96 Aligned_cols=188 Identities=9% Similarity=0.074 Sum_probs=106.0
Q ss_pred EEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEEcCCe-EEEEE--CC--eEEEEECCCCce
Q 019349 51 IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVL--RE--KTYIYDANTLAI 125 (342)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~~--d~--~i~i~d~~~~~~ 125 (342)
-+.+..+.+ +.++.. ..+.|..||... +....+.....+..+++.++. ++++. .+ .|..++..+++.
T Consensus 36 gia~~~~g~-lyv~d~------~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 36 NLASAPDGT-IFVTNH------EVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp EEEECTTSC-EEEEET------TTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred eEEECCCCC-EEEEeC------CCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 345555544 333432 367899998765 445555666778899998764 44444 22 477778777765
Q ss_pred eeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce-eEEEe---------cccCCeeEEEECCCCCEEE
Q 019349 126 LDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS-HCEID---------AHQAPLAAIVLSSNGMYIA 195 (342)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~-~~~~~---------~h~~~v~~i~~s~dg~~la 195 (342)
......... ...-..+..+++..+++.. .+|.|..+|..+++. +.... ..-...+.| ++|+++|.
T Consensus 108 ~~~~~~~~~-~~~~g~~~~~~~~~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 108 ETLLTLPDA-IFLNGITPLSDTQYLTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEEECTTC-SCEEEEEESSSSEEEEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEEeCCCc-cccCcccccCCCcEEEEEC--CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 433332211 1112222233343444332 468899999875431 21110 111234555 78888776
Q ss_pred EEeCCCcEEEEEEcCC-Cee--EEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 196 TASEQGTIIRVFLVSE-ATK--SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 196 t~s~dg~~irlwd~~~-~~~--~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
.+......|..+|+.. ++. ...+... .....|+++++|. ++++....+.|.+|+.+
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~---l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGN---LYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCC---EEEECBTTCCEEEECTT
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCC---EEEEeCCCCeEEEECCC
Confidence 6655444467899864 331 1111111 1245689999998 77777778899999854
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.75 E-value=0.0036 Score=60.47 Aligned_cols=236 Identities=8% Similarity=0.034 Sum_probs=119.3
Q ss_pred EEEEcC-CCCEEEEEcCC------------cEEEEeCCCCcEE--EEEee---CCEEEEEEcCCCCeEEEEcCCCCCCCC
Q 019349 12 FVSFNQ-DNSGFALSTKD------------GFKIFDSSTGRLC--YERAV---GAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (342)
Q Consensus 12 ~l~fs~-d~~~la~g~~~------------g~~v~d~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (342)
++++.+ +++.++.|+.+ .+.+||+.+++.. ..... .....+.+..++. +.++||. .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~-----~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGN-----D 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSS-----S
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEeCCC-----C
Confidence 667777 88887777532 2578998877432 11111 1111233344444 4444441 3
Q ss_pred CCeEEEEECCCCcEEEEEecCC--ceEEEEEc-CCeEEEEEC--------CeEEEEECCCCceeeEEeC----CC-CCce
Q 019349 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLN-KKRLVIVLR--------EKTYIYDANTLAILDTIDT----VP-NLKG 137 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~-~~~~~~~~d--------~~i~i~d~~~~~~~~~~~~----~~-~~~~ 137 (342)
+..+.+||..+++....-..+. .-.++... ...+++... +.+.+||..+.+-. .+.. +. ....
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~~~~ 342 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLTADK 342 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCCCCT
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce-eCCCccccccccccc
Confidence 5689999998876543322221 11233333 445555542 46899999776422 1110 00 0000
Q ss_pred EEEEeeCCCccEEEEeCCC-------CccEEEEEEccCCceeEEEecccC---------CeeEEEEC-CCCCEEEEEeCC
Q 019349 138 LCAFSPSLNACFLAVPAST-------TKGSVLVYNVMELHSHCEIDAHQA---------PLAAIVLS-SNGMYIATASEQ 200 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~-------~~g~i~iwd~~~~~~~~~~~~h~~---------~v~~i~~s-~dg~~lat~s~d 200 (342)
. + ....++...++++.+ ....+..||..+..-......+.. .-.++.|. .+++.++.|+.+
T Consensus 343 ~-~-~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 343 Q-G-LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp T-G-GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred c-c-eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 0 0 001122233333310 134678899877653332222211 22444454 478888888754
Q ss_pred C-------c---EEEEEEcCCCeeEEEe-ccCcCceeEEEEEEecCCCcccEEEEEeCC-----------CcEEEEecCC
Q 019349 201 G-------T---IIRVFLVSEATKSYSF-RRGTYPSTIFSLSFGQSMQFQDILVATSSS-----------GSLHVFSPGF 258 (342)
Q Consensus 201 g-------~---~irlwd~~~~~~~~~~-~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d-----------g~i~vwd~~~ 258 (342)
+ . .+.+||..+.+-.... .....+..-.+++..|+++ +++.|+.+ .++.+||.++
T Consensus 421 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~---i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 421 DYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS---TFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp SSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC---EEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC---EEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 2 1 3568888766543221 0111111124456678998 88888754 4688888765
Q ss_pred C
Q 019349 259 A 259 (342)
Q Consensus 259 ~ 259 (342)
.
T Consensus 498 ~ 498 (656)
T 1k3i_A 498 D 498 (656)
T ss_dssp T
T ss_pred C
Confidence 3
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.68 E-value=0.05 Score=53.55 Aligned_cols=228 Identities=7% Similarity=-0.048 Sum_probs=127.9
Q ss_pred CEEEEEcCCcEEEEeCCCCcEEE-EEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCC----cEEEEEe-c
Q 019349 20 SGFALSTKDGFKIFDSSTGRLCY-ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG----TALRELN-F 93 (342)
Q Consensus 20 ~~la~g~~~g~~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~----~~~~~~~-~ 93 (342)
.+|+.+....++..++....... .........+.+....+.+.++.. ..+.|..+++... .....+. .
T Consensus 396 p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~------~~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 396 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp CEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSS
T ss_pred cccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec------cceeEEEEeccCCCCCcceeEEEecC
Confidence 35666666778888877654322 122344455566655566666654 3678888887642 1122222 1
Q ss_pred CCceEEEEEc--CCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCC
Q 019349 94 LTSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL 169 (342)
Q Consensus 94 ~~~v~~i~~~--~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~ 169 (342)
-....+|+++ ...++++. .++|.+.++........+..... ...+++.+|....|..+.....+.|...++...
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~--~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC--CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC--CcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 2345566665 44566665 56899999875433222222222 234455555444555444213378999998754
Q ss_pred ceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-cCceeEEEEEEecCCCcccEEEEEeCC
Q 019349 170 HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSS 248 (342)
Q Consensus 170 ~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-~~~~~v~~l~fs~d~~~~~~l~~~s~d 248 (342)
.....+...-...+.|++++.+..|..+......|+..++.. .....+... .......+|++..+ . ++.+-...
T Consensus 548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~~~-~---lYwtD~~~ 622 (791)
T 3m0c_C 548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED-K---VFWTDIIN 622 (791)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEETT-E---EEEEETTT
T ss_pred ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEEEeCC-E---EEEEECCC
Confidence 443334433456889999987777777765555578888854 333333221 11223556777433 4 55666667
Q ss_pred CcEEEEecCCCC
Q 019349 249 GSLHVFSPGFAI 260 (342)
Q Consensus 249 g~i~vwd~~~~~ 260 (342)
+.|...+..+++
T Consensus 623 ~~I~~~dk~tG~ 634 (791)
T 3m0c_C 623 EAIFSANRLTGS 634 (791)
T ss_dssp TEEEEEETTTCC
T ss_pred CEEEEEeCCCCc
Confidence 888888865554
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.67 E-value=0.024 Score=49.31 Aligned_cols=176 Identities=11% Similarity=0.015 Sum_probs=102.9
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECCC---CceeeE-EeCC-CCCceEEEEeeC
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANT---LAILDT-IDTV-PNLKGLCAFSPS 144 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~---~~~~~~-~~~~-~~~~~~~~~~~~ 144 (342)
.+.|+..|+.+.+....+.....+.++.+++ +.++++. .+.|+.+++.. +..... +... ..+.+ .++.+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g-lavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG-LAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE-EEEETT
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE-EEEeec
Confidence 4679999998877655555455778899975 3555555 56999999875 122222 2221 22322 234332
Q ss_pred CCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCC--CcEEEEEEcCCCeeEEEeccCc
Q 019349 145 LNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQ--GTIIRVFLVSEATKSYSFRRGT 222 (342)
Q Consensus 145 ~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~d--g~~irlwd~~~~~~~~~~~~~~ 222 (342)
+..|..+.. ..+.|.++|+........+.......+.|+++|++..|..+... ++ |...++. |+....+...
T Consensus 88 --~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~-I~~~~~d-G~~~~~~~~~- 161 (316)
T 1ijq_A 88 --HSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE- 161 (316)
T ss_dssp --TTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCCEEEEECS-
T ss_pred --CCeEEEEEC-CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe-EEEEcCC-CCCeEEEEEC-
Confidence 223433332 46889999987544333333334567899999966655554433 44 4567764 4443333221
Q ss_pred CceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 223 YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 223 ~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
.-.....|+++|++. .+..+-+..+.|..+|++.
T Consensus 162 ~~~~P~gla~d~~~~--~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 162 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCSCEEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEeccCC--EEEEEECCCCeEEEEecCC
Confidence 123467899998766 1444555677899999874
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.60 E-value=0.0081 Score=58.01 Aligned_cols=230 Identities=9% Similarity=-0.017 Sum_probs=116.0
Q ss_pred EEEEcCCCCEEEEEcCC--cEEEEeCCCCcEEEEEe--eCCE-EEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc
Q 019349 12 FVSFNQDNSGFALSTKD--GFKIFDSSTGRLCYERA--VGAF-SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~~--g~~v~d~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~ 86 (342)
++++..+++.+++|+.+ .+.+||+.+.+...... .... ..+....++.. .++||..+.....+.+.+||..+++
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~i-yv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRV-FTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCE-EEECCCCCSSSCCCCEEEEETTTTE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeE-EEEeCcccCCcccccceEeCCCCCc
Confidence 46788899998888744 37999988764332211 1111 12223334444 4444412211124679999998876
Q ss_pred EEEEE-----ecCCc-eEEEEEcCCeEEEEE-----------CCeEEEEECCCCceeeEEeCCCC-------CceEEEEe
Q 019349 87 ALREL-----NFLTS-ILAVRLNKKRLVIVL-----------REKTYIYDANTLAILDTIDTVPN-------LKGLCAFS 142 (342)
Q Consensus 87 ~~~~~-----~~~~~-v~~i~~~~~~~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~-------~~~~~~~~ 142 (342)
....- ..... -..+....+.+++.. ...+..||..+.+-......... +....++.
T Consensus 326 W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~ 405 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVM 405 (656)
T ss_dssp EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEE
T ss_pred ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEe
Confidence 54320 00000 000000112222222 34678899877653332221111 11112222
Q ss_pred -eCCCccEEEEeCCCC------cc---EEEEEEccCCceeEEE--ecccCC-eeEEEECCCCCEEEEEeCC---------
Q 019349 143 -PSLNACFLAVPASTT------KG---SVLVYNVMELHSHCEI--DAHQAP-LAAIVLSSNGMYIATASEQ--------- 200 (342)
Q Consensus 143 -~~~~~~~l~~~~~~~------~g---~i~iwd~~~~~~~~~~--~~h~~~-v~~i~~s~dg~~lat~s~d--------- 200 (342)
+..++.+++++|... .. .|.+||..+.+-.... ..+... -.++++.|+|+.++.|+.+
T Consensus 406 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~ 485 (656)
T 1k3i_A 406 YDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST 485 (656)
T ss_dssp EETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCS
T ss_pred ccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCC
Confidence 123566777776310 01 6888888766533222 112222 2445677899999999864
Q ss_pred --CcEEEEEEcCCCeeEEEeccCcC-ceeEEEEEEecCCCcccEEEEEeC
Q 019349 201 --GTIIRVFLVSEATKSYSFRRGTY-PSTIFSLSFGQSMQFQDILVATSS 247 (342)
Q Consensus 201 --g~~irlwd~~~~~~~~~~~~~~~-~~~v~~l~fs~d~~~~~~l~~~s~ 247 (342)
.+ +.+||..+.+-. .+..... .....+..+.||++ +++.|+.
T Consensus 486 ~~~~-v~~ydp~t~~W~-~~~~~~~~R~~hs~a~ll~dg~---v~v~GG~ 530 (656)
T 1k3i_A 486 PVFT-PEIYVPEQDTFY-KQNPNSIVRVYHSISLLLPDGR---VFNGGGG 530 (656)
T ss_dssp BCCC-CEEEEGGGTEEE-ECCCCSSCCCTTEEEEECTTSC---EEEEECC
T ss_pred cccc-eEEEcCCCCcee-ecCCCCCccccccHhhcCCCcE---EEecCCC
Confidence 23 469999776532 1211111 11122345678999 8988885
No 284
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.59 E-value=0.034 Score=49.07 Aligned_cols=176 Identities=11% Similarity=-0.051 Sum_probs=102.9
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCC-CCCceEEEEeeCCCcc
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTV-PNLKGLCAFSPSLNAC 148 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 148 (342)
.+.|+..++........+.....+.++++++ +.++.+. .+.|+.+++........+... ..+.+ .++. +.+.
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g-lavd--~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG-LAVD--WVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE-EEEE--TTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccE-EEEe--cCCC
Confidence 4568888887665544444445678888874 3455554 568999998765433333222 12222 2344 3233
Q ss_pred EEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe-CC-CcEEEEEEcCCCeeEEEeccCcCcee
Q 019349 149 FLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS-EQ-GTIIRVFLVSEATKSYSFRRGTYPST 226 (342)
Q Consensus 149 ~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s-~d-g~~irlwd~~~~~~~~~~~~~~~~~~ 226 (342)
.|..+.. ..+.|.+.++........+...-...+.|+++|.+..|.... .. ++ |..+++. |.....+... ....
T Consensus 129 ~ly~~d~-~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~-I~r~~~d-G~~~~~~~~~-~~~~ 204 (349)
T 3v64_C 129 KLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMD-GSGRRIIADT-HLFW 204 (349)
T ss_dssp EEEEEET-TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCSCEESCCS-SCSC
T ss_pred eEEEEcC-CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCE-EEEEeCC-CCCcEEEEEC-CCCC
Confidence 4433333 467899999875543333333445678999999665555444 33 44 5677765 4333333211 1233
Q ss_pred EEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 227 IFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 227 v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
...|+|+|++. .+..+-+..+.|..++++.
T Consensus 205 PnGla~d~~~~--~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 205 PNGLTIDYAGR--RMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred cceEEEeCCCC--EEEEEECCCCEEEEEeCCC
Confidence 68899998765 1444445677899999875
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.57 E-value=0.034 Score=48.53 Aligned_cols=222 Identities=13% Similarity=0.144 Sum_probs=109.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCc---EEEE-Ee--eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEE
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGR---LCYE-RA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~---~~~~-~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~i 79 (342)
....+.+|.|.+++..+++|....+ +...+.++ .... .. ...+..+.+ +.+.+.+++. ++.|..
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~--~~~~~~~~g~-------~g~i~~ 103 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSF--QGNEGWIVGE-------PPIMLH 103 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEE--ETTEEEEEEE-------TTEEEE
T ss_pred CCCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEe--cCCeEEEEEC-------CCeEEE
Confidence 3457999999988888887764433 33334332 1111 00 112333333 3344444432 344333
Q ss_pred EECCCCcEEEEEe----cCCceEEEEEc-CCeEEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 80 FNTTTGTALRELN----FLTSILAVRLN-KKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 80 wd~~~~~~~~~~~----~~~~v~~i~~~-~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
- ...|+.=.... .+..+..+.+. +..++++. ++.|+. ....++.-..+... ....+..+...+++.+++++
T Consensus 104 S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 104 T-TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQE-AIGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp E-SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECS-CCCCEEEEEECTTSCEEEEE
T ss_pred E-CCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecC-CCcceEEEEEcCCCcEEEEE
Confidence 2 12233212221 23456666654 44455555 343322 12223332233222 22356667777777777665
Q ss_pred CCCCccEEEE-EEc--cCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC--cCceeEE
Q 019349 154 ASTTKGSVLV-YNV--MELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG--TYPSTIF 228 (342)
Q Consensus 154 ~~~~~g~i~i-wd~--~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~--~~~~~v~ 228 (342)
. .|.+.. .|- .+-+.+. ......+..++++++++.++. +.+|. +++.+...|+.-..+... .....+.
T Consensus 181 ~---~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~ 253 (327)
T 2xbg_A 181 S---RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGK-IAFSDPDNSENWGELLSPLRRNSVGFL 253 (327)
T ss_dssp T---TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTE-EEEEETTEEEEECCCBCTTSSCCSCEE
T ss_pred C---CCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCce-EEEecCCCCCeeEeccCCcccCCcceE
Confidence 4 344433 342 2222221 234567889999999876654 55775 445543324432222211 0112488
Q ss_pred EEEEecCCCcccEEEEEeCCCcE
Q 019349 229 SLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
++++.+++. +++++ .+|.|
T Consensus 254 ~v~~~~~~~---~~~~g-~~g~i 272 (327)
T 2xbg_A 254 DLAYRTPNE---VWLAG-GAGAL 272 (327)
T ss_dssp EEEESSSSC---EEEEE-STTCE
T ss_pred EEEecCCCE---EEEEe-CCCeE
Confidence 899998877 55554 46776
No 286
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.56 E-value=0.0074 Score=54.25 Aligned_cols=145 Identities=14% Similarity=0.185 Sum_probs=97.3
Q ss_pred EcCCeEEEEECCeEEEEECCCCceeeEEeCCC--CCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc---------
Q 019349 102 LNKKRLVIVLREKTYIYDANTLAILDTIDTVP--NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH--------- 170 (342)
Q Consensus 102 ~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~--------- 170 (342)
-+...++++.++.||.-++.+....+.+..+. ....+..+..+|++.+||..| +.+|.|..+..+.
T Consensus 30 ~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g---~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN---DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC---SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec---CCeEEEEEecCccccCcccccc
Confidence 35567777889999999988665666776652 222344466678888999987 4679998886221
Q ss_pred ---eeEEEec------ccCCeeEEEECCC---CCEEEEEeCCCcEEEEEEcCCCe--eEEEeccC-------cCceeEEE
Q 019349 171 ---SHCEIDA------HQAPLAAIVLSSN---GMYIATASEQGTIIRVFLVSEAT--KSYSFRRG-------TYPSTIFS 229 (342)
Q Consensus 171 ---~~~~~~~------h~~~v~~i~~s~d---g~~lat~s~dg~~irlwd~~~~~--~~~~~~~~-------~~~~~v~~ 229 (342)
..+.+.- ...+|..+.|+|- |..|++=-.|++ ||+||+.... .. .+... .....|.+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 1123332 2568999999995 468998889987 6999998532 11 22211 11245899
Q ss_pred EEEecCCCcccEEEEEe--CCCcEEEE
Q 019349 230 LSFGQSMQFQDILVATS--SSGSLHVF 254 (342)
Q Consensus 230 l~fs~d~~~~~~l~~~s--~dg~i~vw 254 (342)
++|.+++- .|.+.+ ..|.|+-.
T Consensus 185 ~~Fg~~~l---TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFSKDGL---TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTSS---CEEEEECTTSCEEEEE
T ss_pred EEEcCCCc---EEEEEecCCCCCEEEE
Confidence 99999875 566644 77887654
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.55 E-value=0.044 Score=49.40 Aligned_cols=177 Identities=10% Similarity=-0.002 Sum_probs=104.6
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECCCCc----eeeEEeCCCCCceEEEEeeCC
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTLA----ILDTIDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~ 145 (342)
.+.|+..|+........+.....+.++++++ +.++.+. .+.|+.+++.... ....+.. .......++.++
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~--~~~~p~glavD~ 168 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--DIQAPDGLAVDW 168 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS--SCSCEEEEEEET
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC--CCCCcccEEEEe
Confidence 4688888887766555555556788899875 4555554 5688888886521 2222221 122333444444
Q ss_pred CccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe-C-CCcEEEEEEcCCCeeEEEeccCcC
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS-E-QGTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s-~-dg~~irlwd~~~~~~~~~~~~~~~ 223 (342)
.+..|..+.. ..+.|.+.++........+...-.....|+++|.+.+|.-+. . .+. |...++. |.....+... .
T Consensus 169 ~~~~lY~~d~-~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~-I~~~~~d-G~~~~~~~~~-~ 244 (400)
T 3p5b_L 169 IHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE-N 244 (400)
T ss_dssp TTTEEEEEET-TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCC-EEEEETT-SCSCEEEECS-S
T ss_pred cCCceEEEEC-CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCE-EEEEeCC-CCccEEEEEC-C
Confidence 2334444443 468899999876554444443445578999999666555544 2 255 5677875 4333333211 1
Q ss_pred ceeEEEEEEecCCCcccEEEEE-eCCCcEEEEecCCC
Q 019349 224 PSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGFA 259 (342)
Q Consensus 224 ~~~v~~l~fs~d~~~~~~l~~~-s~dg~i~vwd~~~~ 259 (342)
-.....|++++++. .|..+ +..+.|..+|++..
T Consensus 245 l~~P~glavd~~~~---~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 245 IQWPNGITLDLLSG---RLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp CSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEEeCCC---EEEEEECCCCEEEEEeCCCC
Confidence 23468899998776 55554 56678999998753
No 288
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.55 E-value=0.0072 Score=62.18 Aligned_cols=220 Identities=12% Similarity=0.193 Sum_probs=135.3
Q ss_pred EEEEeCCCCcEEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCCceEEEEE-cCCeEE
Q 019349 30 FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLV 108 (342)
Q Consensus 30 ~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~ 108 (342)
+.|-|+.++........ .-...-|.+..+.+++-++ +++.|+|+.+.+.+.++.++.+|.=-.| +++.+.
T Consensus 50 vvIidl~~~~~~~rrpi-~AdsAIMnP~~~iiALrag--------~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~ 120 (1630)
T 1xi4_A 50 VVIIDMNDPSNPIRRPI-SADSAIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 120 (1630)
T ss_pred EEEEECCCCCCcccccc-cchhhccCCCcceEEEecC--------CeEEEeehHHhhhhcccccCCCceEEEecCCCeeE
Confidence 56777766543221111 1112234556677777653 7999999999999999988888766666 778888
Q ss_pred EEECCeEEEEECCCC-ceeeEEeCCC--CCceEEEEeeCCCccEEEEeCC-----CCccEEEEEEccCCceeEEEecccC
Q 019349 109 IVLREKTYIYDANTL-AILDTIDTVP--NLKGLCAFSPSLNACFLAVPAS-----TTKGSVLVYNVMELHSHCEIDAHQA 180 (342)
Q Consensus 109 ~~~d~~i~i~d~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~-----~~~g~i~iwd~~~~~~~~~~~~h~~ 180 (342)
++++..|+-|++... .+++-++.+. ....++.+..+++..+++..|- ...|.+++|..+.+ ..+.++||..
T Consensus 121 lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~ 199 (1630)
T 1xi4_A 121 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (1630)
T ss_pred EEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHh
Confidence 899999999999642 3333333322 2345777778888888876552 14588999987764 3345677776
Q ss_pred CeeEEEECC---CCCEEEEEeC--CCcEEEEEEcCCC---eeEE-----E--eccCcCceeEEEEEEecCCCcccEEEEE
Q 019349 181 PLAAIVLSS---NGMYIATASE--QGTIIRVFLVSEA---TKSY-----S--FRRGTYPSTIFSLSFGQSMQFQDILVAT 245 (342)
Q Consensus 181 ~v~~i~~s~---dg~~lat~s~--dg~~irlwd~~~~---~~~~-----~--~~~~~~~~~v~~l~fs~d~~~~~~l~~~ 245 (342)
....+.+.. ....++.+.. .|.-++|-++... .... . |+......-..+|..|+... .+..-
T Consensus 200 ~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g---~iy~i 276 (1630)
T 1xi4_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLI 276 (1630)
T ss_pred hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC---EEEEE
Confidence 554444421 1223333322 1223567777432 1100 0 11000011134577777776 88889
Q ss_pred eCCCcEEEEecCCCCCC
Q 019349 246 SSSGSLHVFSPGFAINQ 262 (342)
Q Consensus 246 s~dg~i~vwd~~~~~~~ 262 (342)
+.-|.|++||++++...
T Consensus 277 tk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 277 TKYGYIHLYDLETGTCI 293 (1630)
T ss_pred ecCceEEEEecccchhh
Confidence 99999999999998753
No 289
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.53 E-value=0.0017 Score=63.84 Aligned_cols=116 Identities=7% Similarity=0.080 Sum_probs=74.8
Q ss_pred eEEEEeeC-CCccEEEEeCCC---CccEEEEEEccCC-ceeE-EEecccCCeeEEEECCCCCEEEEEeCCC----cEEEE
Q 019349 137 GLCAFSPS-LNACFLAVPAST---TKGSVLVYNVMEL-HSHC-EIDAHQAPLAAIVLSSNGMYIATASEQG----TIIRV 206 (342)
Q Consensus 137 ~~~~~~~~-~~~~~l~~~~~~---~~g~i~iwd~~~~-~~~~-~~~~h~~~v~~i~~s~dg~~lat~s~dg----~~irl 206 (342)
.+....++ ||+.+||+.... ...+|+++|+.++ +.+. .+.. ....++|+|||+.|+..+.|. ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 45667888 899998876421 1246999999988 6321 1221 235688999999888877652 13567
Q ss_pred EEcCCCee--EEEeccCcCceeEEEEEEecCCCcccEEEEEeC---CCcEEEEecCCC
Q 019349 207 FLVSEATK--SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS---SGSLHVFSPGFA 259 (342)
Q Consensus 207 wd~~~~~~--~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~---dg~i~vwd~~~~ 259 (342)
+++.+++. ...+... ......++.||||++ +|+..+. ...|+++|++++
T Consensus 252 ~~lgt~~~~~~lv~~~~-~~~~~~~~~~SpDg~---~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEH-NPLFSAFMYKAADTN---TLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGGCEEEEECC-CTTCEEEEEECTTSS---EEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchhcEEEEecC-CCceEEEEEECCCCC---EEEEEecCCCCceEEEEECCCC
Confidence 88876641 1222111 122356789999999 7877663 335888888765
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.48 E-value=0.087 Score=51.87 Aligned_cols=177 Identities=10% Similarity=-0.026 Sum_probs=102.9
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECCCC----ceeeEEeCCCCCceEEEEeeCC
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTL----AILDTIDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~ 145 (342)
...|+..++........+.....+.+++++. ..++++. .+.|+.+++... .....+..... ....++.+.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~--~P~GLAvD~ 480 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ--APDGLAVDW 480 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS--CCCEEEEET
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC--Ccceeeeee
Confidence 4577888877665544444455778888875 4555555 468888888653 11222221111 122333343
Q ss_pred CccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeC-C-CcEEEEEEcCCCeeEEEeccCcC
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASE-Q-GTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~-d-g~~irlwd~~~~~~~~~~~~~~~ 223 (342)
.+..|..+.. ..+.|.+.++........+...-.....|+++|.+.+|..+.. . ++ |...++. |.....+... .
T Consensus 481 ~~~~LY~tD~-~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~-I~~~~~d-G~~~~~lv~~-~ 556 (791)
T 3m0c_C 481 IHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE-N 556 (791)
T ss_dssp TTTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCCEEEEECS-S
T ss_pred cCCcEEEEec-CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCe-EEEEecC-CCceEEEEeC-C
Confidence 3434444444 5789999998765444334444456889999997655555542 2 44 5678875 4443444222 2
Q ss_pred ceeEEEEEEecCCCcccEEEEE-eCCCcEEEEecCCC
Q 019349 224 PSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGFA 259 (342)
Q Consensus 224 ~~~v~~l~fs~d~~~~~~l~~~-s~dg~i~vwd~~~~ 259 (342)
......|++.+.+. .|..+ ...+.|..++++..
T Consensus 557 l~~P~GLavD~~~~---~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 557 IQWPNGITLDLLSG---RLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEecCCC---eEEEEeCCCCcEEEEecCCC
Confidence 23478899997766 55555 55678999998654
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.39 E-value=0.057 Score=46.98 Aligned_cols=227 Identities=10% Similarity=0.025 Sum_probs=127.0
Q ss_pred EEEEEcCCcEEEEeCCCCc--EE-EEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEE-EEE-ecCC
Q 019349 21 GFALSTKDGFKIFDSSTGR--LC-YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL-REL-NFLT 95 (342)
Q Consensus 21 ~la~g~~~g~~v~d~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~-~~~-~~~~ 95 (342)
+|+.+....++..+++... .. ..........+.+....+.+..+.. ..+.|..++...+... ..+ ..-.
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET------TTTEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC------CCCcEEEEEccCCCceEEEEcCCCC
Confidence 4666666778889987653 11 1111122334555555566666654 3678999998765321 111 1112
Q ss_pred ceEEEEEc--CCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce
Q 019349 96 SILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (342)
Q Consensus 96 ~v~~i~~~--~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~ 171 (342)
...++++. ...++++. .+.|.++++.... ...+.. ........++.+|.+..|..+.....+.|...++.....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~-~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFW-QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC-SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEe-CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 45566665 34555554 4689999986532 222221 111223344445444455444321357888888764332
Q ss_pred eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcE
Q 019349 172 HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 172 ~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
...+...-...+.|+++|++..|..+......|..+|+.. .....+..+ .......|++..+ . ++.+-...+.|
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~-~~~~P~glav~~~-~---lywtd~~~~~V 231 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKG-SLPHPFALTLFED-I---LYWTDWSTHSI 231 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECS-CCSCEEEEEEETT-E---EEEEETTTTEE
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecC-CCCCceEEEEeCC-E---EEEEecCCCeE
Confidence 2222222345689999998777777766555578888853 332333221 1233567887543 3 66666777889
Q ss_pred EEEecCCCCC
Q 019349 252 HVFSPGFAIN 261 (342)
Q Consensus 252 ~vwd~~~~~~ 261 (342)
..++..+++.
T Consensus 232 ~~~~~~~G~~ 241 (318)
T 3sov_A 232 LACNKYTGEG 241 (318)
T ss_dssp EEEETTTCCS
T ss_pred EEEECCCCCc
Confidence 9999866553
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.34 E-value=0.03 Score=48.71 Aligned_cols=156 Identities=10% Similarity=0.079 Sum_probs=99.7
Q ss_pred EEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCC-----C-CceEEEEee---CCCccEEEEeCC---------
Q 019349 98 LAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVP-----N-LKGLCAFSP---SLNACFLAVPAS--------- 155 (342)
Q Consensus 98 ~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~-----~-~~~~~~~~~---~~~~~~l~~~~~--------- 155 (342)
.++.|++ ..+++.. .++|..|+...+..... .... + ......+.. ++++.++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 4566754 5566665 78999999875543322 2211 1 123467777 677777764320
Q ss_pred --CCccEEEEEEcc---CCceeEEEe--ccc-----------CCeeEEEECCCCCEEEEEeCC-CcEEEEEEcCCCeeEE
Q 019349 156 --TTKGSVLVYNVM---ELHSHCEID--AHQ-----------APLAAIVLSSNGMYIATASEQ-GTIIRVFLVSEATKSY 216 (342)
Q Consensus 156 --~~~g~i~iwd~~---~~~~~~~~~--~h~-----------~~v~~i~~s~dg~~lat~s~d-g~~irlwd~~~~~~~~ 216 (342)
..+..|..+|+. +++.+.... ... ...+.|++.++|+..++++.- +.++ ..+.. |+.+.
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~-rV~pd-G~~~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIA-RVSAD-GKTVS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEE-EECTT-SCCEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEE-EEeCC-CCEEe
Confidence 015779999999 777665443 211 248899999999999999887 7644 44543 44333
Q ss_pred EeccC----cCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 217 SFRRG----TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 217 ~~~~~----~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.+... ....-.+.|+++||+. .|++....|.+..+|++.+
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~---~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSN---KLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTT---EEEEESSSSSEEEEECSSS
T ss_pred eeeecCCCcccccCcceEEEeCCCC---EEEEEcCCCeEEEEcCCCC
Confidence 33211 1112267899999998 7888877999999998854
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.27 E-value=0.032 Score=50.85 Aligned_cols=153 Identities=9% Similarity=0.037 Sum_probs=89.6
Q ss_pred ceEEEEEcC---CeEEEEEC-CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC---CccEEEEEEccC
Q 019349 96 SILAVRLNK---KRLVIVLR-EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST---TKGSVLVYNVME 168 (342)
Q Consensus 96 ~v~~i~~~~---~~~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~g~i~iwd~~~ 168 (342)
....+++++ ..++++.. +.|+.+|+..++...... .......++.++++..|..+... ....+.+++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~- 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE- 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-
Confidence 346778885 23444443 688999988765443332 22345667777777755555421 11234444432
Q ss_pred Ccee--EEEecccCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE
Q 019349 169 LHSH--CEIDAHQAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT 245 (342)
Q Consensus 169 ~~~~--~~~~~h~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~ 245 (342)
+... ..+.. ......++++| +|.++++-...++ |..++...+........+. ......|+|+|+++ +|..+
T Consensus 214 g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~-V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~---~lyv~ 287 (430)
T 3tc9_A 214 SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQ-VFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGN---YAYIV 287 (430)
T ss_dssp GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTE-EEEEETTTTEEEEEEECSS-SSCCEEEEECTTSS---EEEEE
T ss_pred Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCE-EEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCC---EEEEE
Confidence 2221 23332 23457789999 6776666656666 5789987765422222111 12357899999998 55555
Q ss_pred -eCCCcEEEEecCC
Q 019349 246 -SSSGSLHVFSPGF 258 (342)
Q Consensus 246 -s~dg~i~vwd~~~ 258 (342)
...+.|+.++.+.
T Consensus 288 d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 288 VVNQHYILRSDYDW 301 (430)
T ss_dssp ETTTTEEEEEEEET
T ss_pred ECCCCEEEEEeCCc
Confidence 5677899988764
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.24 E-value=0.0013 Score=64.10 Aligned_cols=225 Identities=7% Similarity=-0.030 Sum_probs=114.1
Q ss_pred EEEEcCCcEEEEeCCCCcEEEEE-eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC----CcEEEEEec-CC
Q 019349 22 FALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT----GTALRELNF-LT 95 (342)
Q Consensus 22 la~g~~~g~~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~----~~~~~~~~~-~~ 95 (342)
|+.+....+++.++.+.+..... .......+.+....+.+.++.. ..+.|..+++.+ ......+.. ..
T Consensus 380 ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~------~~~~I~~~~~~g~~~~~~~~~~i~~~~~ 453 (699)
T 1n7d_A 380 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQ 453 (699)
T ss_dssp BCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT------TTTSBEEEESCCCCC-CCCCCBCCSCC-
T ss_pred EEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec------CCCeEEEEecCCCCCCcceEEEEeCCCC
Confidence 44445556777777765433211 1122223444444555555543 367888888764 121111111 11
Q ss_pred ceEEEEEc--CCeEEEEE--CCeEEEEECCCCceeeEEeCC-CCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCc
Q 019349 96 SILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTV-PNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (342)
Q Consensus 96 ~v~~i~~~--~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~ 170 (342)
...+|++. ...++++. .+.|.++++........+... ..+. .++.+|.+..|..+.....+.|.++++....
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 33456665 34455543 468999988654332222211 2232 3344554444544442123678887765432
Q ss_pred eeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC-cCceeEEEEEEecCCCcccEEEEEeCCC
Q 019349 171 SHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSSG 249 (342)
Q Consensus 171 ~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~-~~~~~v~~l~fs~d~~~~~~l~~~s~dg 249 (342)
....+...-...+.|+|+|++..|..+......|..+|+... ....+... ........|++..+ . ++.+....+
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd~~-~---lywtd~~~~ 605 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFED-K---VFWTDIINE 605 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSCCCCEEETT-E---EEEECSTTT
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCceEeEEECC-E---EEEEeCCCC
Confidence 221222223446789999987666665544444678888643 22333221 11122445666554 3 566667778
Q ss_pred cEEEEecCCCC
Q 019349 250 SLHVFSPGFAI 260 (342)
Q Consensus 250 ~i~vwd~~~~~ 260 (342)
.|..++..+++
T Consensus 606 ~V~~~d~~~G~ 616 (699)
T 1n7d_A 606 AIFSANRLTGS 616 (699)
T ss_dssp CEEEEETTTEE
T ss_pred eEEEEEccCCC
Confidence 99999976544
No 295
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.15 E-value=0.21 Score=48.89 Aligned_cols=228 Identities=11% Similarity=0.103 Sum_probs=130.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEE---eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER---AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 6 ~~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
+...|++|.-.++|. |=.|+.+|+..||-...+..... ....+..+... ....+.+.+ .+-+..+|.
T Consensus 20 ~~n~V~~I~qD~~G~-lWigT~~GL~ryDG~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigT--------~~Gl~~yd~ 89 (758)
T 3ott_A 20 EASVVSCFLQDSEGL-IWIGSNKGLFSYDGYSTQQHFTYGENNNTRIYCGVII-DNTYLYMGT--------DNGILVYNY 89 (758)
T ss_dssp SCCCEEEEEECTTSC-EEEEESSCEEEECSSCEEECSCTTSTTSSCEEEEEEE-TTTEEEEEE--------TTEEEEEET
T ss_pred ccceEEEEEECCCCC-EEEEECCCccccCCCceEEEEccCCCCCceEEEEEEc-CCCcEEEEe--------CCCeEEEeC
Confidence 356799999999886 44677899988885432211100 01123322222 223444443 245788998
Q ss_pred CCCcEEEEE-ecCCceEEEEEcCCeEEEEECCeEEEEECCCCceeeEEe---CCCCCceEEEEeeCCCccEEEEeCCCCc
Q 019349 83 TTGTALREL-NFLTSILAVRLNKKRLVIVLREKTYIYDANTLAILDTID---TVPNLKGLCAFSPSLNACFLAVPASTTK 158 (342)
Q Consensus 83 ~~~~~~~~~-~~~~~v~~i~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 158 (342)
.+.+..... .....|.++......+.+++.+-+..||..+.+.. .+. .......+.++..+.++.+.+... +
T Consensus 90 ~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~---~ 165 (758)
T 3ott_A 90 RADRYEQPETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTY---N 165 (758)
T ss_dssp TTTEECCCSCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEET---T
T ss_pred CCCEEECcccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeC---C
Confidence 776432210 01235777766677788888778999998766533 221 111123466777776666665432 3
Q ss_pred cEEEEEEccCCceeEEEe--cc----cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEE
Q 019349 159 GSVLVYNVMELHSHCEID--AH----QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 232 (342)
Q Consensus 159 g~i~iwd~~~~~~~~~~~--~h----~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~f 232 (342)
| +..+|..+.+.. .+. .. ...|.+|...+++..|-.|...| + ..+|..+++.. .+.. .....|.++..
T Consensus 166 G-l~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G-l-~~~~~~~~~~~-~~~~-l~~~~i~~i~~ 239 (758)
T 3ott_A 166 G-LCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY-L-FQYFPSTGQIK-QTEA-FHNNSIKSLAL 239 (758)
T ss_dssp E-EEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE-E-EEEETTTTEEE-EEEE-EEEEEEEEEEE
T ss_pred C-HhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEECCC-C-eEEcCCCCeEE-eccC-CCCCeEEEEEE
Confidence 4 778887765432 221 11 12488888888776555555444 4 47898776532 2211 11234888888
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 233 GQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 233 s~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
.+++. |..|+.+ -+.+++.++
T Consensus 240 d~~g~----lWigT~~-Gl~~~~~~~ 260 (758)
T 3ott_A 240 DGNGD----LLAGTDN-GLYVYHNDT 260 (758)
T ss_dssp CTTCC----EEEEETT-EEEEECCTT
T ss_pred cCCCC----EEEEeCC-ceeEEecCC
Confidence 88886 4455544 577887654
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.03 E-value=0.081 Score=47.60 Aligned_cols=101 Identities=13% Similarity=0.110 Sum_probs=70.5
Q ss_pred ccEEEEEEccCCceeEEEecc----cCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCe------------eEEEeccC
Q 019349 158 KGSVLVYNVMELHSHCEIDAH----QAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT------------KSYSFRRG 221 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~~h----~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~------------~~~~~~~~ 221 (342)
++.||.-++......+.++.. -..|..+..||+|++||..+..+ |.|-.+..+. ....+.-+
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~--V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE--IFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE--EEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe--EEEEEecCccccCcccccccccceeEEEcC
Confidence 477998888754444454432 23688899999999999998764 4688887332 11223222
Q ss_pred c----CceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 222 T----YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 222 ~----~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
. ...+|..+.|||-+.....|++-..|++|++||+....
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~ 160 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ 160 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC
Confidence 1 13569999999976422389999999999999998743
No 297
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.99 E-value=0.19 Score=45.34 Aligned_cols=226 Identities=13% Similarity=0.175 Sum_probs=122.2
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
.+.|.|.|+.++..+....... -+.-.+|...+++. ..++.|||+++.+.++..........-..++. + .|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A--dsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis~--~--~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA--DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL--N--TVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC--SEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEET--T--EEE
T ss_pred CCeEEEEECCCCCcceeccccc--ceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecCC--C--eEE
Confidence 5689999998876654333222 22334555444444 77999999999998888876554322223332 2 555
Q ss_pred EeCCCCccEEEEEEccC-CceeEEEeccc----CCeeEEEECCCCCEEEEEeC---C----CcEEEEEEcCCCeeEEEec
Q 019349 152 VPASTTKGSVLVYNVME-LHSHCEIDAHQ----APLAAIVLSSNGMYIATASE---Q----GTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~-~~~~~~~~~h~----~~v~~i~~s~dg~~lat~s~---d----g~~irlwd~~~~~~~~~~~ 219 (342)
... +..|.-|++.. ..++..+..|. ..|..-..+++.++++-.+- + |. +.+|.++.+.. ..+.
T Consensus 121 lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~-mQLYS~er~~s-Q~ie 195 (494)
T 1bpo_A 121 LVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA-MQLYSVDRKVS-QPIE 195 (494)
T ss_dssp EEC---SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE-EEEEESTTCCE-EEEC
T ss_pred EEc---CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce-EEEeecccccc-chhe
Confidence 553 46799999864 35777777664 35777778999998775432 3 44 57888865432 2222
Q ss_pred cCcCceeEEEEEEecCCCcccEEEEEeCC---CcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeecc
Q 019349 220 RGTYPSTIFSLSFGQSMQFQDILVATSSS---GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAF 296 (342)
Q Consensus 220 ~~~~~~~v~~l~fs~d~~~~~~l~~~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
+ |.+.-..+.+.-+..-..+++.+... +.+||-++..+..... .+.-..+...+.|+.....-..+
T Consensus 196 -G-haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~---------~f~kk~vdv~fppe~~~DFPvam 264 (494)
T 1bpo_A 196 -G-HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ---------PFPKKAVDVFFPPEAQNDFPVAM 264 (494)
T ss_dssp -C-SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC---------CCCCEEEECCCCTTSTTCCEEEE
T ss_pred -e-eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC---------CccceeeeeeCCcccccCceeEE
Confidence 2 11111111111010000134444332 7899999976521110 01101111112221100000112
Q ss_pred CCCccccEEEEEEeCCcEEEEEEec
Q 019349 297 PAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 297 ~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
....+-..++..+.-|.+++|++.+
T Consensus 265 qvs~kygviyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 265 QISEKHDVVFLITKYGYIHLYDLET 289 (494)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTT
T ss_pred EecccCCEEEEEecCceEEEEeccc
Confidence 2244557899999999999997643
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.87 E-value=0.047 Score=49.77 Aligned_cols=155 Identities=9% Similarity=0.016 Sum_probs=86.2
Q ss_pred ceEEEEEcCC---e-EEEEEC-CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC-C-ccEEEEEEccC
Q 019349 96 SILAVRLNKK---R-LVIVLR-EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST-T-KGSVLVYNVME 168 (342)
Q Consensus 96 ~v~~i~~~~~---~-~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~g~i~iwd~~~ 168 (342)
....++++++ . ++++.. +.|+.+|..+++...... .......++.++++.++++.... . ...+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~---~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT---NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC---CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec---CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 3567888863 4 444432 689999988776543322 22235566667777644433210 0 11233333322
Q ss_pred Cce-eEEEecccCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE-
Q 019349 169 LHS-HCEIDAHQAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT- 245 (342)
Q Consensus 169 ~~~-~~~~~~h~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~- 245 (342)
... ...+. .......++++| +|.+.++-..+++ |+.+|..++.....+........-..|+|+|+++ +|..+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~-V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~---~LYvad 291 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAM-ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD---WAYIIY 291 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSE-EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS---EEEEEE
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCE-EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC---EEEEEe
Confidence 211 11222 234457789999 6776666555665 5788988776522221111111234699999997 55554
Q ss_pred eCCCcEEEEecCC
Q 019349 246 SSSGSLHVFSPGF 258 (342)
Q Consensus 246 s~dg~i~vwd~~~ 258 (342)
...+.|+.++++.
T Consensus 292 ~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 292 NGKHCIYRVDYNR 304 (433)
T ss_dssp TTTTEEEEEEBCT
T ss_pred CCCCEEEEEeCCC
Confidence 5567899988763
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.84 E-value=0.19 Score=42.90 Aligned_cols=229 Identities=9% Similarity=0.062 Sum_probs=109.5
Q ss_pred CCCEEEEEc-CC------cEEEEeCCCCcEEEEEee--CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCc--
Q 019349 18 DNSGFALST-KD------GFKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT-- 86 (342)
Q Consensus 18 d~~~la~g~-~~------g~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~-- 86 (342)
++..++.|+ .+ .+.+||+.+.+...-... .......... .+.+.+.||.. .....+.+.++|..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~-~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYD-GRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE-CCEEEEEcCCC-CCccCceEEEEECCCCCCC
Confidence 455566666 22 357888877653321111 1111111112 34555555522 11124679999998877
Q ss_pred -EEEEEecCC--ceEEEEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCC
Q 019349 87 -ALRELNFLT--SILAVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (342)
Q Consensus 87 -~~~~~~~~~--~v~~i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (342)
....-..+. .-.++....+.+++.. .+.+.+||+.+.+-...-..+.......+... ++..++.+|.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 443322222 1122333355666654 24689999877642222122222222222222 34566666632
Q ss_pred C---ccEEEEEEccCCceeE--EEecccCCeeEEEECCCCCEEEEEeCCC-----cEEEEEEcCCCeeEEEeccCcCcee
Q 019349 157 T---KGSVLVYNVMELHSHC--EIDAHQAPLAAIVLSSNGMYIATASEQG-----TIIRVFLVSEATKSYSFRRGTYPST 226 (342)
Q Consensus 157 ~---~g~i~iwd~~~~~~~~--~~~~h~~~v~~i~~s~dg~~lat~s~dg-----~~irlwd~~~~~~~~~~~~~~~~~~ 226 (342)
. ...+.+||+.+.+=.. .+......-.++.+ +++.++.|+.++ . +.+||+.+.+-.. +.....+..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~~r~ 245 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDSWTT-VTSMTTPRC 245 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEE-ECCCSSCCB
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCcEEE-CCCCCCccc
Confidence 1 2468899987764221 12111111222333 567788887642 3 4689998775322 211111111
Q ss_pred EEEEEEecCCCcccEEEEEeCC-----CcEEEEecCC
Q 019349 227 IFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGF 258 (342)
Q Consensus 227 v~~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~ 258 (342)
-.+++. -+++ +++.|+.+ +.|.+||+++
T Consensus 246 ~~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 246 YVGATV-LRGR---LYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SCEEEE-ETTE---EEEECCBCSSSBEEEEEEEETTT
T ss_pred ceeEEE-ECCE---EEEEcCcCCCcccccEEEEcCCC
Confidence 112222 2566 67777655 3577787664
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.84 E-value=0.087 Score=48.70 Aligned_cols=156 Identities=10% Similarity=0.001 Sum_probs=89.6
Q ss_pred eEEEEEcC---CeEEEEEC--CeEEEEECCCCceeeEEeCCC-CCceEEEEee-------CCCccEEEEeCCCC-----c
Q 019349 97 ILAVRLNK---KRLVIVLR--EKTYIYDANTLAILDTIDTVP-NLKGLCAFSP-------SLNACFLAVPASTT-----K 158 (342)
Q Consensus 97 v~~i~~~~---~~~~~~~d--~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~l~~~~~~~-----~ 158 (342)
...|+++| +.++++.+ +.|++.|+.++.+...+.... .......+++ ++++..|.++.... .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56788886 35666663 478889988876554443322 2234666777 77776555554311 1
Q ss_pred cEEEEEEccC-Ccee-----EEEecccCCeeEEEECCC-CCEEEEEeCCCcEEEEEEcC-------CCee----------
Q 019349 159 GSVLVYNVME-LHSH-----CEIDAHQAPLAAIVLSSN-GMYIATASEQGTIIRVFLVS-------EATK---------- 214 (342)
Q Consensus 159 g~i~iwd~~~-~~~~-----~~~~~h~~~v~~i~~s~d-g~~lat~s~dg~~irlwd~~-------~~~~---------- 214 (342)
..|.+++... ++.. ..+.... ....++++|+ +.++++-..++. |..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeeccccccccc
Confidence 2366666433 2221 2333222 3467889994 555556666666 4689987 5543
Q ss_pred -EEEeccCcCceeEEEEEEecCCCcccEEEEE-eCCCcEEEEecC
Q 019349 215 -SYSFRRGTYPSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPG 257 (342)
Q Consensus 215 -~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~-s~dg~i~vwd~~ 257 (342)
...+.........+.|+|+|++. +|..+ +..+.|+.++.+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~---~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGK---YAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSS---EEEEEETTTTEEEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCC---EEEEEeCCCCEEEEEecC
Confidence 11211111122357899999998 54444 567789987754
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.74 E-value=0.65 Score=47.74 Aligned_cols=170 Identities=13% Similarity=0.141 Sum_probs=104.1
Q ss_pred CeEEEEECCCCcEEEEEecCC--ceEEEE---EcC---CeEEEEE-----------CCeEEEEECCCCce--eeEEeCCC
Q 019349 75 RRLCLFNTTTGTALRELNFLT--SILAVR---LNK---KRLVIVL-----------REKTYIYDANTLAI--LDTIDTVP 133 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~--~v~~i~---~~~---~~~~~~~-----------d~~i~i~d~~~~~~--~~~~~~~~ 133 (342)
..|++.|..+.+.+..+++.. .+.+++ +.. ..+++.+ .|.|++|++.+.++ +.+.+.
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v-- 884 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV-- 884 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE--
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEc--
Confidence 468999999888888877654 455554 332 3455544 25799999875432 333222
Q ss_pred CCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEE--EEcCC
Q 019349 134 NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRV--FLVSE 211 (342)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irl--wd~~~ 211 (342)
...+.+++.-. +.++|..| ..|++|++...+.+..-..+-..|..+.....|++++.|..-..+ .+ |+...
T Consensus 885 -~g~v~al~~~~-g~Lla~ig----~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv-~~~~y~~~~ 957 (1158)
T 3ei3_A 885 -KGAVYSMVEFN-GKLLASIN----STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV-LLLAYKPME 957 (1158)
T ss_dssp -SSCEEEEEEET-TEEEEEET----TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCE-EEEEEETTT
T ss_pred -CCcCEEEeeeC-CEEEEEcC----CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheE-EEEEEEcCC
Confidence 23455666543 45666555 679999998765443111112223333343457888888765543 23 45444
Q ss_pred CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 212 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
+ .+..+.+...+..++++.|=.++ .++.+..+|.+.+.....
T Consensus 958 ~-~L~~~a~D~~~~~vta~~~ld~~----t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 958 G-NFEEIARDFNPNWMSAVEILDDD----NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp T-EEEEEEECCSCBCEEEEEEEETT----EEEEEETTSEEEEEEECT
T ss_pred C-eEEEEEeecccccEEEEEEEccC----cEEEEcCCCcEEEEecCC
Confidence 3 34455444456668888887665 578899999999998765
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.68 E-value=0.28 Score=42.68 Aligned_cols=189 Identities=10% Similarity=0.041 Sum_probs=106.4
Q ss_pred EEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCC---------ceEEEEE---cCC-eEEEEEC-------
Q 019349 53 EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT---------SILAVRL---NKK-RLVIVLR------- 112 (342)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~---------~v~~i~~---~~~-~~~~~~d------- 112 (342)
.|......+.+.+. ..++|..||...+..... ..+. .+.++.+ .++ +++++.+
T Consensus 19 ~wd~~~g~~~vs~l------~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 19 IYDRTRQVFYQSNL------YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp EEETTTTEEEEEET------TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCcCCCCEEEEEec------cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33333445555543 478999999876644333 3332 3578999 455 4555333
Q ss_pred --------CeEEEEECC---CCceeeEEeCCC-----------CCceEEEEeeCCCccEEEEeCCCCc-cEEEEEEccCC
Q 019349 113 --------EKTYIYDAN---TLAILDTIDTVP-----------NLKGLCAFSPSLNACFLAVPASTTK-GSVLVYNVMEL 169 (342)
Q Consensus 113 --------~~i~i~d~~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~-g~i~iwd~~~~ 169 (342)
..+..||+. +++.+....... .......+..++++...++... . +.|...+....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~--~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL--GMPAIARVSADGK 169 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--SSCEEEEECTTSC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--CCCeEEEEeCCCC
Confidence 579999999 787776664321 1223556777777766665442 3 55555554432
Q ss_pred ceeEEEe------cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCee--EEEecc-Cc--CceeEEE-EEEecCCC
Q 019349 170 HSHCEID------AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK--SYSFRR-GT--YPSTIFS-LSFGQSMQ 237 (342)
Q Consensus 170 ~~~~~~~------~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~--~~~~~~-~~--~~~~v~~-l~fs~d~~ 237 (342)
.+..+. ...-..+.|+++|||+.|+.....|.+ .-+|+.+... +. ..+ +. ....... +.--.+++
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L-~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRAL-TAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSE-EEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTE
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeE-EEEcCCCCcceeec-ccccCCcccccCcccccccccCCE
Confidence 222221 112236799999999999988778886 4789875433 21 110 11 0001233 34445676
Q ss_pred cccE-EEEEeCCCcEEEEec
Q 019349 238 FQDI-LVATSSSGSLHVFSP 256 (342)
Q Consensus 238 ~~~~-l~~~s~dg~i~vwd~ 256 (342)
. |++.+..+.+.+.+-
T Consensus 247 ---vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 247 ---SVLVGARAPYAISFRSW 263 (334)
T ss_dssp ---EEEEEEETTEEEEEECS
T ss_pred ---EEEEEcCCCCEEEEECC
Confidence 5 555555666666553
No 303
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.58 E-value=0.62 Score=45.49 Aligned_cols=223 Identities=9% Similarity=0.106 Sum_probs=127.2
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEE--eeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 7 ~~~V~~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
...|.++.-.++|. |-+|+.+|+..||..+.+..... ....+..+.. ....+.+.+. +.|..+|..+
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~--~~g~lWigt~--------~Gl~~~~~~~ 130 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL--QGDTLWLGAL--------NGLYTYQLQS 130 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE--ETTEEEEEET--------TEEEEEETTT
T ss_pred CceEEEEEEcCCCc-EEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe--cCCcEEEEcC--------CcceeEeCCC
Confidence 45689988887764 66777889999998776432210 0112332222 2344555442 3788889877
Q ss_pred CcEEEEEe-----c-CCceEEEEEcC-CeEEEEECCeEEEEECCCCceeeEEeCCCC----CceEEEEeeCCCccEEEEe
Q 019349 85 GTALRELN-----F-LTSILAVRLNK-KRLVIVLREKTYIYDANTLAILDTIDTVPN----LKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 85 ~~~~~~~~-----~-~~~v~~i~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~ 153 (342)
++.. .+. . ...|.++...+ ..+.+++.+-+..|+..+.+.. .+..... ...+.++..+.++..|-.+
T Consensus 131 ~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 131 RKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp CCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred CeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEE
Confidence 6543 231 1 23688888764 4677777777888998766432 2222111 1235566666544322222
Q ss_pred CCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC------cCceeE
Q 019349 154 ASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG------TYPSTI 227 (342)
Q Consensus 154 ~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~------~~~~~v 227 (342)
. ++-+..+|..+++...........|.+|...++|.+.+. +.+| + .+++..+++. ..+... .....|
T Consensus 209 t---~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~G-l-~~~~~~~~~~-~~~~~~~~~~~~l~~~~i 281 (758)
T 3ott_A 209 T---EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNG-L-YVYHNDTTPL-QHIIHDSRNIQSLTNNII 281 (758)
T ss_dssp E---EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTE-E-EEECCTTSCC-EEECCCTTCTTSCSCSCE
T ss_pred E---CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCc-e-eEEecCCCcE-EEEEcCCCCcCcCCcCeE
Confidence 2 245888998766432211112346899998888876554 4555 4 5788776543 222211 112348
Q ss_pred EEEEEecCCCcccEEEEEeCCCcEEEE
Q 019349 228 FSLSFGQSMQFQDILVATSSSGSLHVF 254 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~s~dg~i~vw 254 (342)
.++....++. |-.|+..| +.++
T Consensus 282 ~~i~~D~~g~----lWiGT~~G-l~~~ 303 (758)
T 3ott_A 282 WNIFADQEHN----IWLGTDYG-ISLS 303 (758)
T ss_dssp EEEEECTTCC----EEEEESSS-EEEE
T ss_pred EEEEEcCCCC----EEEEeCCc-cccc
Confidence 8888887776 44555556 5444
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.48 E-value=0.38 Score=41.77 Aligned_cols=151 Identities=8% Similarity=0.033 Sum_probs=83.5
Q ss_pred CCceEEEEEcCCeEEEE-E-CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce
Q 019349 94 LTSILAVRLNKKRLVIV-L-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (342)
Q Consensus 94 ~~~v~~i~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~ 171 (342)
...+..+.+.++..+++ . .+.++.-+=..++.-..+.. .....+..+...+++..++... +|.+.+.+...++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~---~G~~~~s~~D~G~t 237 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVN---GGKIAFSDPDNSEN 237 (327)
T ss_dssp CCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEET---TTEEEEEETTEEEE
T ss_pred CcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeC---CceEEEecCCCCCe
Confidence 34678888876644443 3 45444332111222222222 2233455666667776665543 57777764222332
Q ss_pred eEEEe----cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCc-CceeEEEEEEecCCCcccEEEEEe
Q 019349 172 HCEID----AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-YPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 172 ~~~~~----~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~-~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
-..+. .+...+.++++.+++..++.+. +|. + ++....|+.-..+.... .+..++++.|.+++. +++++
T Consensus 238 W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~-i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~----~~~~G 310 (327)
T 2xbg_A 238 WGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGA-L-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ----GFILG 310 (327)
T ss_dssp ECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTC-E-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE----EEEEC
T ss_pred eEeccCCcccCCcceEEEEecCCCEEEEEeC-CCe-E-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc----eEEEc
Confidence 22221 1224588999999888777655 666 3 46665565444443221 134578899986664 66777
Q ss_pred CCCcEEEEe
Q 019349 247 SSGSLHVFS 255 (342)
Q Consensus 247 ~dg~i~vwd 255 (342)
.+|+|.-++
T Consensus 311 ~~G~i~~~~ 319 (327)
T 2xbg_A 311 QKGILLRYV 319 (327)
T ss_dssp STTEEEEEC
T ss_pred CCceEEEEc
Confidence 889877765
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.47 E-value=0.34 Score=42.75 Aligned_cols=137 Identities=18% Similarity=0.137 Sum_probs=75.9
Q ss_pred CCeEEEEECCC--Ccee-eEEeCC------CCCceEEEEeeCCCc-cEEEEeCC-CCccEEEEEEccCCc-e---eEEEe
Q 019349 112 REKTYIYDANT--LAIL-DTIDTV------PNLKGLCAFSPSLNA-CFLAVPAS-TTKGSVLVYNVMELH-S---HCEID 176 (342)
Q Consensus 112 d~~i~i~d~~~--~~~~-~~~~~~------~~~~~~~~~~~~~~~-~~l~~~~~-~~~g~i~iwd~~~~~-~---~~~~~ 176 (342)
++.|.++|..+ ++.. -.+... .++.++.... +.++ .+|..+.. ..+.+|.+|++.... . +.++.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~-d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFI-DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEE-CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEE-CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 67899999873 3321 122211 1333433322 2223 23433322 135788898876532 2 23333
Q ss_pred cc-cCCeeEEEECCCCCEEEEEeC-----------------CCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCc
Q 019349 177 AH-QAPLAAIVLSSNGMYIATASE-----------------QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQF 238 (342)
Q Consensus 177 ~h-~~~v~~i~~s~dg~~lat~s~-----------------dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~ 238 (342)
+. -...+.+++.++|++.++... .|. ||.+..++ +..+..+ -..-+.++||||++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~---vyr~d~~~-~~~~~~~--l~~pNGia~spDg~- 233 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF---VTYYSPND-VRVVAEG--FDFANGINISPDGK- 233 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE---EEEECTTC-CEEEEEE--ESSEEEEEECTTSS-
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE---EEEEECCe-EEEeecC--CcccCcceECCCCC-
Confidence 32 245789999999998888651 133 34333332 2222111 12368899999997
Q ss_pred ccEEEEE-eCCCcEEEEecCC
Q 019349 239 QDILVAT-SSSGSLHVFSPGF 258 (342)
Q Consensus 239 ~~~l~~~-s~dg~i~vwd~~~ 258 (342)
.|..+ +..+.|+.|+++.
T Consensus 234 --~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 234 --YVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp --EEEEEEGGGTEEEEEEECT
T ss_pred --EEEEEeCCCCeEEEEEECC
Confidence 55554 5678999999874
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.43 E-value=0.0089 Score=58.16 Aligned_cols=176 Identities=9% Similarity=-0.008 Sum_probs=95.4
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcC--CeEEEEE--CCeEEEEECCC----CceeeEEeCC-CCCceEEEEeeC
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANT----LAILDTIDTV-PNLKGLCAFSPS 144 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~----~~~~~~~~~~-~~~~~~~~~~~~ 144 (342)
.+.|+..++.+.+....+.....+.++++++ ..++++. .+.|+.+++.. ......+... ..+. .++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~---glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD---GLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC---CEECC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc---eEEEE
Confidence 4577888887766544443344566778875 3344443 46888888865 1111111111 1222 23333
Q ss_pred CCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe-CC-CcEEEEEEcCCCeeEEEeccCc
Q 019349 145 LNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS-EQ-GTIIRVFLVSEATKSYSFRRGT 222 (342)
Q Consensus 145 ~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s-~d-g~~irlwd~~~~~~~~~~~~~~ 222 (342)
+.+..|..+.. ..+.|.++++........+.........|+++|++.+|..+. .. ++ |..+++. |.....+...
T Consensus 462 ~~~g~LY~tD~-~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~-I~~~~~d-G~~~~~l~~~- 537 (699)
T 1n7d_A 462 WIHSNIYWTDS-VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE- 537 (699)
T ss_dssp CSSSBCEECCT-TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCC-EEBCCSS-SCCCCEESCS-
T ss_pred eeCCcEEEEec-cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCe-EEEEeCC-CCCeeEEEeC-
Confidence 32223434433 467899999876543333333334568899999655444433 22 45 4566654 3322222111
Q ss_pred CceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 223 YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 223 ~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
.......|+|+|++. .++++-+..+.|.+++++.
T Consensus 538 ~l~~PnGlavd~~~~--~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 538 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SCSSCCCEEECTTTC--CEEEEETTTTEEEEECSSS
T ss_pred CCCCccEEEEeccCC--EEEEEecCCCeEEEEccCC
Confidence 112356799998765 1555666778899999864
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.26 E-value=0.46 Score=40.50 Aligned_cols=225 Identities=12% Similarity=0.084 Sum_probs=108.7
Q ss_pred CEEEEEcC---CcEEEEeCCCCcEEEEEee--C--CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEe
Q 019349 20 SGFALSTK---DGFKIFDSSTGRLCYERAV--G--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELN 92 (342)
Q Consensus 20 ~~la~g~~---~g~~v~d~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~ 92 (342)
..++.|+. +.+.+||+.+.+-...... . ....+. . .+.+.+.||.. ....+.+.++|..+++....-.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--W-DNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--E-TTEEEEECCBS--SSBCCEEEEEETTTTEEEEEEC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--E-CCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCC
Confidence 34556654 3478899887754321110 1 111121 2 34555555532 1234778999999887554333
Q ss_pred cCC--ceEEEEEcCCeEEEEE--C------CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC-----
Q 019349 93 FLT--SILAVRLNKKRLVIVL--R------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT----- 157 (342)
Q Consensus 93 ~~~--~v~~i~~~~~~~~~~~--d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 157 (342)
.+. .-.++....+.+++.. + +.+.+||..+.+-...-..+.......+... ++.+++++|...
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTC
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcc
Confidence 322 1122333355566654 2 3688999887642211111111112222222 345556665211
Q ss_pred --ccEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCCCc----EEEEEEcCCCeeEEEeccCcC-ceeEE
Q 019349 158 --KGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQGT----IIRVFLVSEATKSYSFRRGTY-PSTIF 228 (342)
Q Consensus 158 --~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~----~irlwd~~~~~~~~~~~~~~~-~~~v~ 228 (342)
...+.+||+.+.+= +..+......-.++.+ ++++++.|+.++. .+.+||+.+.+-. .+..-.. .....
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWK-MVSPMPWKGVTVK 242 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEE-ECCCCSCCBSCCE
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEE-ECCCCCCCcccee
Confidence 24588999887642 2112111111122223 6677777765431 1468998876532 1111111 11122
Q ss_pred EEEEecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019349 229 SLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 259 (342)
Q Consensus 229 ~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~~ 259 (342)
++.+ +++ +++.|+.+ +.+.+||+++.
T Consensus 243 ~~~~--~~~---i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 243 CAAV--GSI---VYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEE--TTE---EEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEEE--CCE---EEEEeCcCCCeeeeeEEEEcCCCC
Confidence 2222 566 77777744 46788887654
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.22 E-value=0.48 Score=40.31 Aligned_cols=228 Identities=14% Similarity=0.096 Sum_probs=108.6
Q ss_pred CCCEEEEEcC-----CcEEEEeCCCCcEEEEEee--C--CEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEE
Q 019349 18 DNSGFALSTK-----DGFKIFDSSTGRLCYERAV--G--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL 88 (342)
Q Consensus 18 d~~~la~g~~-----~g~~v~d~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~ 88 (342)
++..++.|+. +.+..||+.+.+....... . ....+. . .+.+.+.||.. ....-+.+.++|..+++..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-~~~lyv~GG~~-~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY--M-AGLVFAVGGFN-GSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--E-TTEEEEESCBC-SSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE--E-CCEEEEEeCcC-CCccccceEEECCCCCcee
Confidence 3445556653 2367889887653322111 1 111121 1 45555665521 1112367899999887654
Q ss_pred EEEecCC--ceEEEEEcCCeEEEEE--C-----CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC--
Q 019349 89 RELNFLT--SILAVRLNKKRLVIVL--R-----EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT-- 157 (342)
Q Consensus 89 ~~~~~~~--~v~~i~~~~~~~~~~~--d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 157 (342)
..-..+. .-.++....+.+++.. + +.+.+||+.+.+-...-..+.......+... ++..++.+|.+.
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVAS 168 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTT
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCC
Confidence 4332222 1122333355555554 2 3688899877642211111111112222222 344666665311
Q ss_pred ---ccEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCCC-----cEEEEEEcCCCeeEEEeccCcCceeE
Q 019349 158 ---KGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQG-----TIIRVFLVSEATKSYSFRRGTYPSTI 227 (342)
Q Consensus 158 ---~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg-----~~irlwd~~~~~~~~~~~~~~~~~~v 227 (342)
...+.+||+.+.+= +..+........++.+ ++++++.|+.++ . +.+||..+.+-.. +.....+..-
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~-~~~~~~~r~~ 244 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNAWRQ-VADMNMCRRN 244 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTEEEE-ECCCSSCCBS
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCCEee-CCCCCCcccc
Confidence 23588999877642 2122211111222333 577888887643 3 4689998765322 2111111011
Q ss_pred EEEEEecCCCcccEEEEEeCCC-----cEEEEecCCC
Q 019349 228 FSLSFGQSMQFQDILVATSSSG-----SLHVFSPGFA 259 (342)
Q Consensus 228 ~~l~fs~d~~~~~~l~~~s~dg-----~i~vwd~~~~ 259 (342)
.+++. -+++ +++.|+.++ .+.+||+++.
T Consensus 245 ~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 245 AGVCA-VNGL---LYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CEEEE-ETTE---EEEECCBCSSSBCCCEEEEETTTT
T ss_pred CeEEE-ECCE---EEEECCcCCCcccccEEEEcCCCC
Confidence 11222 2566 777776553 4888887654
No 309
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.04 E-value=0.26 Score=51.13 Aligned_cols=221 Identities=12% Similarity=0.172 Sum_probs=117.6
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEE
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 151 (342)
.+.|.|.|+.++..+... +-..-+.-.+|...+++. ..++.|||+++.+.++...... .++-..|-.+. .|+
T Consensus 47 ~~~vvIidl~~~~~~~rr--pi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e---~VvfWkWis~~-~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR--PISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD---DVTFWKWISLN-TVA 120 (1630)
T ss_pred CceEEEEECCCCCCcccc--cccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCC---CceEEEecCCC-eeE
Confidence 458999999887655322 112223334666656655 6799999999887777765533 35445553322 444
Q ss_pred EeCCCCccEEEEEEccC-CceeEEEecc----cCCeeEEEECCCCCEEEEEeC-------CCcEEEEEEcCCCeeEEEec
Q 019349 152 VPASTTKGSVLVYNVME-LHSHCEIDAH----QAPLAAIVLSSNGMYIATASE-------QGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 152 ~~~~~~~g~i~iwd~~~-~~~~~~~~~h----~~~v~~i~~s~dg~~lat~s~-------dg~~irlwd~~~~~~~~~~~ 219 (342)
... +..|.-|++.. ..++..+..| ...|..-..+++.++++..|- .|. +.++.+..+.. ..+.
T Consensus 121 lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~-mQLyS~er~~s-Q~ie 195 (1630)
T 1xi4_A 121 LVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA-MQLYSVDRKVS-QPIE 195 (1630)
T ss_pred EEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccce-eeeeecccccc-hhhh
Confidence 443 45799999963 3455555555 346777778899998775432 354 57888765431 1111
Q ss_pred cCcCceeEEEEEE--ec-CCCcccEEEEEeC---CCcEEEEecCCCCCCCCCCCcccccccccccccccccccc--ccce
Q 019349 220 RGTYPSTIFSLSF--GQ-SMQFQDILVATSS---SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPA--DHHV 291 (342)
Q Consensus 220 ~~~~~~~v~~l~f--s~-d~~~~~~l~~~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 291 (342)
| |.+.-..+.+ ++ ... +++.+.. .+.+||-++..+..... .+.-..+..-+.|+ +...
T Consensus 196 -g-ha~~F~~~~~~~~~~~~~---l~~f~~~~~~g~kLhi~Ei~~~~~~~~---------~f~kk~~~~~~~~~~~~Dfp 261 (1630)
T 1xi4_A 196 -G-HAASFAQFKMEGNAEEST---LFCFAVRGQAGGKLHIIEVGTPPTGNQ---------PFPKKAVDVFFPPEAQNDFP 261 (1630)
T ss_pred -H-hHhhhheeccCCCCCCce---EEEEEEecCCCceEEEEecCCCccCCC---------CCccccccccCCcccccCcc
Confidence 1 0110000111 01 111 2222211 26899999976521110 01111111112221 1111
Q ss_pred eeeccCCCccccEEEEEEeCCcEEEEEEec
Q 019349 292 LRNAFPAGVKRASVSVITYNGYFVEYIFSI 321 (342)
Q Consensus 292 ~~~~~~~~~~~~~l~~~~~dg~v~~~~~~~ 321 (342)
. .+...++-..++..+.-|.+++|++.+
T Consensus 262 v--~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 262 V--AMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred e--EEEeccccCEEEEEecCceEEEEeccc
Confidence 1 122244557899999999999998865
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.00 E-value=1.1 Score=42.65 Aligned_cols=225 Identities=8% Similarity=0.014 Sum_probs=120.1
Q ss_pred EEEEEcCCcEEEEeCCCCc--EEEE-EeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcE-EEEEecC-C
Q 019349 21 GFALSTKDGFKIFDSSTGR--LCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA-LRELNFL-T 95 (342)
Q Consensus 21 ~la~g~~~g~~v~d~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~-~~~~~~~-~ 95 (342)
+|.-+..+.+++.+++... .... ........+++.+..+.+.++.. ..+.|..+++..... ...+... .
T Consensus 11 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~------~~~~I~r~~~~g~~~~~~v~~~~~~ 84 (619)
T 3s94_A 11 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLL 84 (619)
T ss_dssp CEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC-----CEEEECSSCS
T ss_pred eEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEEC------CCCeEEEEEccCCCceEEEEeCCCC
Confidence 4555667778888887542 1111 12234445666666676666654 367888888865432 2222222 3
Q ss_pred ceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEe--CCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCC
Q 019349 96 SILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTID--TVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL 169 (342)
Q Consensus 96 ~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~ 169 (342)
...+++++. ..++++. .+.|.+.++.... ...+. ....|. +++.+|.+..|..+.....+.|...++...
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~---~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~ 160 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPR---AIALDPSSGFMYWTDWGEVPKIERAGMDGS 160 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCC---CEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCc---eEEEecCCCeEEEeccCCCCEEEEEECCCC
Confidence 677888875 4555555 5689999986543 22232 122233 233444333444443213467777776543
Q ss_pred ceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCC
Q 019349 170 HSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG 249 (342)
Q Consensus 170 ~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg 249 (342)
.........-...+.|++++++..|..+......|...|+.... ...+..+. .....+|++..+ . ++.+-...+
T Consensus 161 ~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~-~~~P~gi~~~~~-~---ly~td~~~~ 234 (619)
T 3s94_A 161 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGS-LPHPFALTLFED-I---LYWTDWSTH 234 (619)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE-EC----------CCCEEESSS-E---EEEECTTTC
T ss_pred ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc-cEEEEeCC-CCCceEEEEeCC-E---EEEecCCCC
Confidence 33322333345678999999877777776544446778875433 22222211 122356777655 4 566656678
Q ss_pred cEEEEecCCCCC
Q 019349 250 SLHVFSPGFAIN 261 (342)
Q Consensus 250 ~i~vwd~~~~~~ 261 (342)
.|...|..+++.
T Consensus 235 ~V~~~d~~tg~~ 246 (619)
T 3s94_A 235 SILACNKYTGEG 246 (619)
T ss_dssp SEEEEESSSCCC
T ss_pred EEEEEECCCCcc
Confidence 899998766543
No 311
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.98 E-value=0.66 Score=39.77 Aligned_cols=186 Identities=11% Similarity=0.140 Sum_probs=89.2
Q ss_pred EEEEcCCcEEEEeCCCCcEEEEEee---CCEEEEEEcCCCCeEEEEcCC-----CCCCCCCCeEEEEECCCCcEEEEEec
Q 019349 22 FALSTKDGFKIFDSSTGRLCYERAV---GAFSIVEMLYSSSLLAIVGAG-----EQPSLSPRRLCLFNTTTGTALRELNF 93 (342)
Q Consensus 22 la~g~~~g~~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g-----~~~~~~d~~i~iwd~~~~~~~~~~~~ 93 (342)
++.|+ +.+..||+.+.+-....-. ..........+...+ +.||. .......+.+..+|..+++....-..
T Consensus 8 ~~~GG-~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iy-v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE-EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVF-VAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET-TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEE-EEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC-CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEE-EEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 44555 6688999988865432111 122223333444444 44441 11011123478899988765432222
Q ss_pred CCc--eEEEEEcCCeEEEEEC----------CeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCC----
Q 019349 94 LTS--ILAVRLNKKRLVIVLR----------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT---- 157 (342)
Q Consensus 94 ~~~--v~~i~~~~~~~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 157 (342)
+.+ -.++....+.+++... +.+.+||..+.+=...-..+.......+... ++..++.+|...
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRKC 163 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSCB
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE--CCEEEEEeCCCCCCcc
Confidence 221 1223334555655542 3588999877531111011111122222232 344666666311
Q ss_pred ccEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCCCc----EEEEEEcCCCe
Q 019349 158 KGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQGT----IIRVFLVSEAT 213 (342)
Q Consensus 158 ~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~----~irlwd~~~~~ 213 (342)
-..+.+||..+.+= +..+......-.++.+ +++.++.|+.++. .+.+||+.+.+
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 24688999877642 2112211111122223 6778888876543 24688988765
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.87 E-value=1.3 Score=42.31 Aligned_cols=225 Identities=8% Similarity=-0.043 Sum_probs=131.6
Q ss_pred CEEEEEcCCcEEEEeCCCCcEEEEEe---eCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC-C
Q 019349 20 SGFALSTKDGFKIFDSSTGRLCYERA---VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-T 95 (342)
Q Consensus 20 ~~la~g~~~g~~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~-~ 95 (342)
.+|+.+....++..++++........ ......+++....+.+..+.. ..+.|..+++........+... .
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCS
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCCC
Confidence 35666677778888887664332221 134445666666677666654 3688988888654433333322 2
Q ss_pred ceEEEEEc--CCeEEEEE--CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce
Q 019349 96 SILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (342)
Q Consensus 96 ~v~~i~~~--~~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~ 171 (342)
...+++++ ...++++. .+.|.+.++.... ...+.. .......+++.+|....|..+.....+.|...++.....
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 45666665 45566665 4689999986542 222221 111233455555543345444321357888888765443
Q ss_pred eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcE
Q 019349 172 HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 172 ~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
...+ ..-...+.|++++++..|..+......|...|+..... ..+... ......|++.. +. ++.+-...+.|
T Consensus 159 ~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~--l~~P~glav~~-~~---ly~tD~~~~~I 230 (628)
T 4a0p_A 159 TTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD--LPHPFGLTQYQ-DY---IYWTDWSRRSI 230 (628)
T ss_dssp EEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC--CSCEEEEEEET-TE---EEEEETTTTEE
T ss_pred EEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc--CCCceEEEEEC-CE---EEEecCCCCEE
Confidence 3223 33456789999998888887776655578888864433 223221 22356788865 34 55555667888
Q ss_pred EEEecCCCC
Q 019349 252 HVFSPGFAI 260 (342)
Q Consensus 252 ~vwd~~~~~ 260 (342)
...|..+++
T Consensus 231 ~~~dk~tg~ 239 (628)
T 4a0p_A 231 ERANKTSGQ 239 (628)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCC
Confidence 888865544
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.85 E-value=2 Score=44.22 Aligned_cols=138 Identities=10% Similarity=0.086 Sum_probs=88.2
Q ss_pred CCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEECCeEEEEECCCCcee--eEEeCCCCCceEEEEeeCCC---
Q 019349 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVLREKTYIYDANTLAIL--DTIDTVPNLKGLCAFSPSLN--- 146 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 146 (342)
.+.|++.+...+..+.++..+. .|...+.+...++++.++.+.++++.++++. ...+. +..+.|++..+.
T Consensus 491 ~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~g~~l~~fel~~~~L~~~~~~~l---~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEM---EHEVACLDITPLGDS 567 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEETTEEEEEEEETTEEEEEEEEEC---SSCEEEEECCCCSSS
T ss_pred cCEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEECCEEEEEEeeCCceeeecccCC---CCceEEEEeecCCCC
Confidence 4678899887777777777653 6888888888888887778888888765432 22222 234666665432
Q ss_pred ---ccEEEEeCCCCccEEEEEEccCCceeEEEec-ccCCeeEEEEC--CCCCEEEEEeCCCcEEE-EEEcCCCeeE
Q 019349 147 ---ACFLAVPASTTKGSVLVYNVMELHSHCEIDA-HQAPLAAIVLS--SNGMYIATASEQGTIIR-VFLVSEATKS 215 (342)
Q Consensus 147 ---~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~-h~~~v~~i~~s--~dg~~lat~s~dg~~ir-lwd~~~~~~~ 215 (342)
..++|.+.. .|++|+|+.+.+.+.+....- -.....+|.+. ....+|..|-.||.+++ .+|..+|+..
T Consensus 568 ~~~s~~~aVg~~-~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 568 NGLSPLCAIGLW-TDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 642 (1158)
T ss_dssp TTCCSEEEEEET-TTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEE
T ss_pred cccccEEEEEEC-CCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccc
Confidence 357776653 489999999988776543321 11234444332 23467889999997654 3455566543
No 314
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.76 E-value=0.86 Score=39.40 Aligned_cols=198 Identities=9% Similarity=-0.088 Sum_probs=105.4
Q ss_pred eEEEEEcCCCCEEEEEc-CC-cEEEEeCCCCc---EEEEEeeCCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC
Q 019349 10 VFFVSFNQDNSGFALST-KD-GFKIFDSSTGR---LCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (342)
Q Consensus 10 V~~l~fs~d~~~la~g~-~~-g~~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~ 84 (342)
+..++|++.+..|.... .. .+..++++... .+.........-+.+.+....+.++.. ..+.|.+.++..
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~------~~~~I~~~~~dG 110 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS------ETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC------CCCEEEEEECCC
Confidence 55788888666665443 33 36777776552 122221122223444444445544443 257888998765
Q ss_pred CcEEEEE-ecCCceEEEEEcCC--eEEEEE---CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCc
Q 019349 85 GTALREL-NFLTSILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTK 158 (342)
Q Consensus 85 ~~~~~~~-~~~~~v~~i~~~~~--~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 158 (342)
......+ .......++++++. .++.+. .+.|+.+++... ....+.. ..-.....++.++++..|..+.. ..
T Consensus 111 ~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~-~~l~~Pnglavd~~~~~lY~aD~-~~ 187 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIIN-SEIYWPNGLTLDYEEQKLYWADA-KL 187 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEEC-SSCSCEEEEEEETTTTEEEEEET-TT
T ss_pred CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEE-CCCCCccEEEEeccCCEEEEEEC-CC
Confidence 4322222 22235688888763 444444 247888887532 2222211 11122345566665556665554 57
Q ss_pred cEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEe
Q 019349 159 GSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 218 (342)
Q Consensus 159 g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~ 218 (342)
+.|..+|+........+.........|++.. +..+.+-...++ |..+|..+|+....+
T Consensus 188 ~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 188 NFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-ILACNKYTGEGLREI 245 (318)
T ss_dssp TEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEE
T ss_pred CEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCe-EEEEECCCCCceEEE
Confidence 8999999864333222332334456777753 344445444444 567888777655544
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.73 E-value=0.98 Score=39.78 Aligned_cols=172 Identities=13% Similarity=0.112 Sum_probs=92.0
Q ss_pred CCCeEEEEECCC--CcEEEEEecC--------CceEEEEEcC----C-eEEEEE----CCeEEEEECCCC-c---eeeEE
Q 019349 73 SPRRLCLFNTTT--GTALRELNFL--------TSILAVRLNK----K-RLVIVL----REKTYIYDANTL-A---ILDTI 129 (342)
Q Consensus 73 ~d~~i~iwd~~~--~~~~~~~~~~--------~~v~~i~~~~----~-~~~~~~----d~~i~i~d~~~~-~---~~~~~ 129 (342)
.++.|.++|..+ ++. ..+... -....|.+.+ . +++++. +.+|.+|++... + .+.++
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 478899999873 332 222211 2567777643 1 355554 347888777542 2 23333
Q ss_pred eCCCCCceEEEEeeCCCccEEEEeCC---------------CCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEE
Q 019349 130 DTVPNLKGLCAFSPSLNACFLAVPAS---------------TTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYI 194 (342)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~l 194 (342)
... .-.....+...+++.+.++... ...|.|.-+|.. + +..+...-..-+.|+|||||+.|
T Consensus 160 ~g~-~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 160 RHK-LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp CCT-TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEE
T ss_pred ccC-CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEE
Confidence 321 1122334444456666655321 013556666653 2 22222223456899999999988
Q ss_pred EEEeCCCcEEEEEEcCC-Cee--EEEeccCcCceeEEEEEEec-CCCcccEEEEEeCC-CcEEEEe
Q 019349 195 ATASEQGTIIRVFLVSE-ATK--SYSFRRGTYPSTIFSLSFGQ-SMQFQDILVATSSS-GSLHVFS 255 (342)
Q Consensus 195 at~s~dg~~irlwd~~~-~~~--~~~~~~~~~~~~v~~l~fs~-d~~~~~~l~~~s~d-g~i~vwd 255 (342)
..+......|..|++.. |+. ...+. .+...-.+++.+ +|. +.+++..+ +.|..|+
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~---lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGD---LWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCC---EEEEEESCHHHHHSCC
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCc---EEEEecCCceEEEEEC
Confidence 88765444467888863 432 12221 133467788888 587 66655433 3444444
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.72 E-value=0.85 Score=38.95 Aligned_cols=232 Identities=12% Similarity=0.071 Sum_probs=109.3
Q ss_pred EcCCCCEEEEEcC-----CcEEEEeCCCCcEEEEEee--C--CEEEEEEcCCCCeEEEEcCCC---CCCCCCCeEEEEEC
Q 019349 15 FNQDNSGFALSTK-----DGFKIFDSSTGRLCYERAV--G--AFSIVEMLYSSSLLAIVGAGE---QPSLSPRRLCLFNT 82 (342)
Q Consensus 15 fs~d~~~la~g~~-----~g~~v~d~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~g~---~~~~~d~~i~iwd~ 82 (342)
..-++..++.|+. +.+.+||+.+.+....... . ....+. . .+.+.+.||.. ......+.+.++|.
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--V-GGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--E-TTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE--E-CCEEEEECCCcCCCCCCeecceEEEECC
Confidence 3345666666662 2367889887753321111 0 111121 1 34555665520 11112357889999
Q ss_pred CCCcEEEEEecCC--ceEEEEEcCCeEEEEE-------CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEe
Q 019349 83 TTGTALRELNFLT--SILAVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (342)
Q Consensus 83 ~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (342)
.+++....-..+. .-.++....+.+++.. .+.+.+||+.+.+-...-..+.......+... ++.+++++
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG 175 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence 8876443222221 1122233355555553 24688899877532211111111112222222 34566666
Q ss_pred CCCC---ccEEEEEEccCCcee--EEEecccCCeeEEEECCCCCEEEEEeCC-----CcEEEEEEcCCCeeEEEeccCcC
Q 019349 154 ASTT---KGSVLVYNVMELHSH--CEIDAHQAPLAAIVLSSNGMYIATASEQ-----GTIIRVFLVSEATKSYSFRRGTY 223 (342)
Q Consensus 154 ~~~~---~g~i~iwd~~~~~~~--~~~~~h~~~v~~i~~s~dg~~lat~s~d-----g~~irlwd~~~~~~~~~~~~~~~ 223 (342)
|.+. ...+.+||+.+.+=. ..+......-.++.+ +++.++.|+.+ .. +.+||+.+.+-.. +.....
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~ 251 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETETWTF-VAPMKH 251 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEE-CCCCSS
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCcEEE-CCCCCC
Confidence 6321 245889998776421 112111111223333 67778887754 23 4689998765321 211111
Q ss_pred ceeEEEEEEecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019349 224 PSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 259 (342)
Q Consensus 224 ~~~v~~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~~ 259 (342)
+..-.+++. -+++ +++.|+.+ ..+.+||+++.
T Consensus 252 ~r~~~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 252 RRSALGITV-HQGR---IYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CCBSCEEEE-ETTE---EEEECCBCSSCBCCEEEEEETTTT
T ss_pred CccceEEEE-ECCE---EEEEcCcCCCcccceEEEEcCCCC
Confidence 111112222 2566 67777643 35778887643
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.13 Score=45.10 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=67.0
Q ss_pred EEEEE-CCeEEEEECCCCceeeEEeCCCCCceEEEEe-eC--CCccEEEEeCCCCccEEEEEEccCCceeEEEec----c
Q 019349 107 LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFS-PS--LNACFLAVPASTTKGSVLVYNVMELHSHCEIDA----H 178 (342)
Q Consensus 107 ~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~----h 178 (342)
+++.+ |+.++-+|..+|+.+.+++... ........ +. .++..++.... .||.|..+|..++.....+.. .
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~-~~p~~~~~~~~~~~~~~~~vv~p~-~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPEN-FQPLIEIQEPSRLETYETLIIEPF-GDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGG-SCCSEECCCSCTTTSSEEEEECCS-TTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCc-cCCcEEecCCccccCCcEEEEEEC-CCCEEEEEECCCCcEEeeecccccee
Confidence 44445 8999999999999998886541 01111111 10 12233333212 489999999888755433321 2
Q ss_pred cCCeeE---EEE-C----CCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccC
Q 019349 179 QAPLAA---IVL-S----SNGMYIATASEQGTIIRVFLVSEATKSYSFRRG 221 (342)
Q Consensus 179 ~~~v~~---i~~-s----~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~ 221 (342)
.+|+.. ..+ . .++..+.+|+.+|++ .-.|+++|+.+.++..+
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l-~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIM-YTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEE-EEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEE-EEEECCCCcEEEEEecC
Confidence 223221 001 0 145678899999986 58999999999998654
No 318
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.39 E-value=2 Score=41.00 Aligned_cols=145 Identities=8% Similarity=-0.041 Sum_probs=80.9
Q ss_pred EEEEECCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEE
Q 019349 107 LVIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIV 186 (342)
Q Consensus 107 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~ 186 (342)
++++..+.|+..++...................++++++.+..|..+.. ..+.|+.+++........+...-.....|+
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~-~~~~I~r~~~~g~~~~~v~~~~~~~p~GlA 398 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDD-EVRAIRRSFIDGSGSQFVVTAQIAHPDGIA 398 (619)
T ss_dssp EEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeC-CCCeEEEEEcCCCccEEEEECCCCCcCceE
Confidence 3344456777777765432111111112234667777765555555543 468899999875443333333335678899
Q ss_pred ECCCCCEEEEE-eCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeC--CCcEEEEecCC
Q 019349 187 LSSNGMYIATA-SEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS--SGSLHVFSPGF 258 (342)
Q Consensus 187 ~s~dg~~lat~-s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~--dg~i~vwd~~~ 258 (342)
+.+.+..|..+ +..++ |.+.++... ....+... .-....+|++.|... +|..+.. .+.|...+++.
T Consensus 399 vD~~~~~lY~tD~~~~~-I~v~~~~G~-~~~~l~~~-~l~~P~~iavdp~~G---~ly~tD~g~~~~I~r~~~dG 467 (619)
T 3s94_A 399 VDWVARNLYWTDTGTDR-IEVTRLNGT-MRKILISE-DLEEPRAIVLDPMVG---YMYWTDWGEIPKIERAALDG 467 (619)
T ss_dssp EETTTTEEEEEETTTTE-EEEEETTSC-SCEEEECT-TCCSEEEEEEETTTT---EEEEEECSSSCEEEEEETTS
T ss_pred EecccCcEEEEeCCCCc-EEEEeCCCC-eEEEEEEC-CCCCeeeEEEEcCCC---cEEEecCCCCCEEEEEccCC
Confidence 99755555544 44454 678888643 32333221 223478999999744 4544432 35676666654
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.52 Score=41.21 Aligned_cols=107 Identities=11% Similarity=0.174 Sum_probs=61.4
Q ss_pred EEEEEcCCc-EEEEeCCCCcEEEEEeeCC-EEEEEEc-C---CCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecC
Q 019349 21 GFALSTKDG-FKIFDSSTGRLCYERAVGA-FSIVEML-Y---SSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (342)
Q Consensus 21 ~la~g~~~g-~~v~d~~~~~~~~~~~~~~-~~~~~~~-~---~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~ 94 (342)
.+++++.|| +.-.|.++|+++....... ...+... . ....+.++.. +.|+.|..+|..+|.....+..+
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p-----~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEP-----FGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECC-----STTTEEEEEETTTEEEEEEEEHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEE-----CCCCEEEEEECCCCcEEeeeccc
Confidence 455666665 5777888887776654330 1111111 1 1223444421 14899999999988766555433
Q ss_pred C-----ceEE---EEE-------cCCeEEEEE-CCeEEEEECCCCceeeEEeCC
Q 019349 95 T-----SILA---VRL-------NKKRLVIVL-REKTYIYDANTLAILDTIDTV 132 (342)
Q Consensus 95 ~-----~v~~---i~~-------~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~ 132 (342)
. ++.. ..+ ....+++.+ +++++..|+.+|+.+.++...
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 2 2221 001 233333444 789999999999999888653
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.90 E-value=1.7 Score=37.71 Aligned_cols=231 Identities=12% Similarity=0.136 Sum_probs=136.0
Q ss_pred EEEEcCCCCEEEEEcCCcEEEEeCCCCcEEEEEee-CCEEEEEEcCCCCeEEEEcCCCCCCCCCCeEEEEECCC-CcEEE
Q 019349 12 FVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-GTALR 89 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~~g~~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~-~~~~~ 89 (342)
+.-.+|..+.||.-....+++||+++.+.+..... .++..-.|. +.+.+++++. ..|.-|++.. ..++.
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWi-s~~~L~lVT~--------taVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVTD--------NAVYHWSMEGESQPVK 141 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEEC-SSSEEEEEES--------SEEEEEESSTTCCCEE
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEec-CCCeEEEEcC--------CcEEEEcccCCCCCce
Confidence 34458888888876667789999999876655443 444444443 4567888874 6999999864 34444
Q ss_pred EEecC-----CceEEEEEcCCeE--EEEE--------CCeEEEEECCCCceeeEEeCCCCCceEEEEeeCC---CccEEE
Q 019349 90 ELNFL-----TSILAVRLNKKRL--VIVL--------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL---NACFLA 151 (342)
Q Consensus 90 ~~~~~-----~~v~~i~~~~~~~--~~~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 151 (342)
-++.+ ..|..-..+++.- ++.+ .|.+.+|..+... .+.++.|.. ....+-..+ ...+++
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa--~F~~~~~~g~~~~~~lf~ 218 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA--SFAQFKMEGNAEESTLFC 218 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEE--EEEEECCTTCSSCEEEEE
T ss_pred eeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeee--eeEEEecCCCCCCceEEE
Confidence 44432 3667777766532 2222 3578899987652 233333211 000111111 112333
Q ss_pred EeCCC-CccEEEEEEccCC---cee---EE----Ee--cccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEe
Q 019349 152 VPAST-TKGSVLVYNVMEL---HSH---CE----ID--AHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 218 (342)
Q Consensus 152 ~~~~~-~~g~i~iwd~~~~---~~~---~~----~~--~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~ 218 (342)
++.+. ..+.++|.++... .+. +. ++ +-.+-..+|.+|+.-..+..-..-|- +.++|+.+|.+++.-
T Consensus 219 fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMN 297 (365)
T ss_dssp EEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEEEe
Confidence 33210 2368999998432 111 11 11 12344567888888778877788885 689999999998876
Q ss_pred ccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 219 RRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 219 ~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+-. ...|..-+.+.+.. =+++-..+|.|.--.++...
T Consensus 298 rIS--~d~iF~ta~~~~~~---Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 298 RIS--GETIFVTAPHEATA---GIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp ECC--SSCEEEEEEEGGGT---EEEEEETTCEEEEEEECTTT
T ss_pred ccC--CCceEEecccCCCC---cEEEEcCCCEEEEEEECccc
Confidence 533 34466555554433 35566688888777776543
No 321
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.74 E-value=3 Score=39.75 Aligned_cols=175 Identities=9% Similarity=-0.048 Sum_probs=102.3
Q ss_pred CCeEEEEECCCCcEEEEEecC--CceEEEEEcC--CeEEEEE--CCeEEEEECCCCceeeEEeCCC-CCceEEEEeeCCC
Q 019349 74 PRRLCLFNTTTGTALRELNFL--TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVP-NLKGLCAFSPSLN 146 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~--~~v~~i~~~~--~~~~~~~--d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 146 (342)
.+.|+..|+.+......+... ..+.++++++ +.++.+. .+.|+.+++........+.... .+.+ .++.+.
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G-lAvD~~-- 90 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG-MAVDWL-- 90 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE-EEEETT--
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce-EEEEeC--
Confidence 468899999876544333332 3678888875 3455555 5789988886544333333221 2333 344433
Q ss_pred ccEEEEeCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeC--CCcEEEEEEcCCCeeEEEeccCcCc
Q 019349 147 ACFLAVPASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASE--QGTIIRVFLVSEATKSYSFRRGTYP 224 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~--dg~~irlwd~~~~~~~~~~~~~~~~ 224 (342)
+..|..+.. ..+.|.+.++........+...-.....|+++|...+|.-... .++ |...++. |.....+... -
T Consensus 91 ~~~LY~tD~-~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~-I~r~~~d-G~~~~~l~~~--~ 165 (628)
T 4a0p_A 91 GKNLYWADT-GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK-IDRAAMD-GSERTTLVPN--V 165 (628)
T ss_dssp TTEEEEEET-TTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCSCEEEECS--C
T ss_pred CCEEEEEEC-CCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE-EEEEeCC-CCceEEEECC--C
Confidence 334444443 4689999998754433233233445689999985445544432 344 4566764 3333333222 2
Q ss_pred eeEEEEEEecCCCcccEEEEE-eCCCcEEEEecCCC
Q 019349 225 STIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGFA 259 (342)
Q Consensus 225 ~~v~~l~fs~d~~~~~~l~~~-s~dg~i~vwd~~~~ 259 (342)
.....|++++++. .|..+ ...+.|..+|++..
T Consensus 166 ~~P~GlalD~~~~---~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 166 GRANGLTIDYAKR---RLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp SSEEEEEEETTTT---EEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEccccC---EEEEEECCCCEEEEEcCCCC
Confidence 3468899999766 45444 56678999998754
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.20 E-value=2.3 Score=36.06 Aligned_cols=187 Identities=10% Similarity=0.040 Sum_probs=93.3
Q ss_pred CeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEEC------CeEEEEECCCCceeeEEe
Q 019349 59 SLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVLR------EKTYIYDANTLAILDTID 130 (342)
Q Consensus 59 ~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~d------~~i~i~d~~~~~~~~~~~ 130 (342)
+.+.++||.. ..+.+.++|..+++....-..+. .-.++....+.+++... +.+.+||..+.+-...-.
T Consensus 12 ~~l~~~GG~~----~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGS----QPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCS----STTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCC----CCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 5566666642 25789999998887543222222 11223334555665542 578899988764322212
Q ss_pred CCCCCceEEEEeeCCCccEEEEeCCC----CccEEEEEEccCCcee--EEEecccCCeeEEEECCCCCEEEEEeCC----
Q 019349 131 TVPNLKGLCAFSPSLNACFLAVPAST----TKGSVLVYNVMELHSH--CEIDAHQAPLAAIVLSSNGMYIATASEQ---- 200 (342)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~l~~~~~~----~~g~i~iwd~~~~~~~--~~~~~h~~~v~~i~~s~dg~~lat~s~d---- 200 (342)
.+.......+... ++..++++|.+ ....+.+||..+.+=. ..+......-.++.+ +++.++.|+.+
T Consensus 88 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 88 PPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNV 163 (306)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTT
T ss_pred CCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCC
Confidence 2222222222222 34566666631 1246889998876422 112111111122222 66777777632
Q ss_pred -----CcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019349 201 -----GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 259 (342)
Q Consensus 201 -----g~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~~ 259 (342)
.. +.+||..+.+-.. +.....+..-.+++.. +++ +++.|+.+ ..+.+||+++.
T Consensus 164 ~~~~~~~-~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~~---i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 164 SGRVLNS-CEVYDPATETWTE-LCPMIEARKNHGLVFV-KDK---IFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TCEECCC-EEEEETTTTEEEE-ECCCSSCCBSCEEEEE-TTE---EEEECCEETTEEBCCEEEEETTTT
T ss_pred cccccce-EEEeCCCCCeEEE-CCCccchhhcceEEEE-CCE---EEEEeCCCCCCCCceEEEeeCCCC
Confidence 23 4589998775322 2111111111122222 566 67776653 46888887654
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.88 E-value=2.6 Score=35.55 Aligned_cols=177 Identities=7% Similarity=-0.051 Sum_probs=87.6
Q ss_pred CCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEE--C-----CeEEEEECCCCc---eeeEEeCCCCCceEEEE
Q 019349 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL--R-----EKTYIYDANTLA---ILDTIDTVPNLKGLCAF 141 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~--d-----~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~ 141 (342)
.+.+.++|..+++....-..+. .-.++....+.+++.. + +.+.+||+.+.+ -...-..+.......+.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 4678999998876443222222 1123333455666654 1 468999987765 21111111111222222
Q ss_pred eeCCCccEEEEeCCCC---ccEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCCCc----EEEEEEcCCC
Q 019349 142 SPSLNACFLAVPASTT---KGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQGT----IIRVFLVSEA 212 (342)
Q Consensus 142 ~~~~~~~~l~~~~~~~---~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~----~irlwd~~~~ 212 (342)
.. ++..++.+|... ...+.+||+.+.+- +..+......-.++.+ +++.++.|+.++. .+.+||..+.
T Consensus 110 ~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 110 TL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22 345666665321 23688999877652 2222211111222223 6777888775431 1468998876
Q ss_pred eeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019349 213 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 259 (342)
Q Consensus 213 ~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~~ 259 (342)
+-.. +.....+..-.+++. -+++ +++.|+.+ +.+.+||+++.
T Consensus 186 ~W~~-~~~~p~~r~~~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 186 HWTN-VTPMATKRSGAGVAL-LNDH---IYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEEE-ECCCSSCCBSCEEEE-ETTE---EEEECCBCSSSBCCCEEEEETTTT
T ss_pred cEEe-CCCCCcccccceEEE-ECCE---EEEEeCCCCCcccceEEEEeCCCC
Confidence 5322 111111111112222 2566 77777654 46889998654
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.42 E-value=1.1 Score=36.54 Aligned_cols=102 Identities=11% Similarity=0.021 Sum_probs=56.4
Q ss_pred EEEEeeCCCccEEEEeCCCCccEEEEEEccCCce------eEEEec-ccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 019349 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS------HCEIDA-HQAPLAAIVLSSNGMYIATASEQGTIIRVFLVS 210 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~------~~~~~~-h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~ 210 (342)
+..++++|++.+.++ . +|.+.-.+..+.+. -..+-. --..-.++.|.|+|.+.++ .||.+.| ++-.
T Consensus 43 ~~~laf~P~G~LYaV-~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr-~~pP 115 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV-L---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYK-ASPP 115 (236)
T ss_dssp CSEEEECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEE-ESCC
T ss_pred ceeEEECCCccEEEE-e---CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEE-eCCC
Confidence 336677777876666 3 46666656544221 111110 0011478999999998888 4687654 4543
Q ss_pred C-CeeE-----EEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEE
Q 019349 211 E-ATKS-----YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLH 252 (342)
Q Consensus 211 ~-~~~~-----~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~ 252 (342)
+ +..- ..+-.+ .=..+..|.|.|++. +.|+. |+.++
T Consensus 116 ~~~~~~Wl~~a~~vg~~-gw~~~~~lff~p~G~---Lyav~--dg~ly 157 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSG-GWSGFKFLFFHPNGY---LYAVH--GQQFY 157 (236)
T ss_dssp CSTTCCHHHHSEEEECS-SGGGEEEEEECTTSC---EEEEE--TTEEE
T ss_pred cCCCCceeccccEeccC-CCCceEEEEECCCce---EEEEe--CCcEE
Confidence 2 2110 011010 112478999999998 55555 77744
No 325
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.26 E-value=5.8 Score=35.15 Aligned_cols=96 Identities=11% Similarity=0.184 Sum_probs=58.5
Q ss_pred ccEEEEEEccCCceeEEEe--------------cc----cCCeeEEEECCC----CCEEEEEeCCCcEEEEEEcCCC---
Q 019349 158 KGSVLVYNVMELHSHCEID--------------AH----QAPLAAIVLSSN----GMYIATASEQGTIIRVFLVSEA--- 212 (342)
Q Consensus 158 ~g~i~iwd~~~~~~~~~~~--------------~h----~~~v~~i~~s~d----g~~lat~s~dg~~irlwd~~~~--- 212 (342)
.+.|.|+|+.+++.-+.+. +. ...|..|++||+ ++.|.-..-.++ ++|.+.+.
T Consensus 180 ~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T~~L~ 257 (381)
T 3q6k_A 180 RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNTKELK 257 (381)
T ss_dssp TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEHHHHS
T ss_pred CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEHHHhh
Confidence 5668888887776443321 11 246889999998 788888877775 46766421
Q ss_pred -----eeEEEeccCcCceeEEEEEEe-cCCCcccEEEEEeCCCcEEEEecCC
Q 019349 213 -----TKSYSFRRGTYPSTIFSLSFG-QSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 213 -----~~~~~~~~~~~~~~v~~l~fs-~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
..+..+-.......-..+++. .+|. ++++--+.+.|..|+..+
T Consensus 258 ~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~---ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 258 QKGGKLNPELLGNRGKYNDAIALAYDPKTKV---IFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp STTCCCCCEEEEECCTTCCEEEEEECTTTCE---EEEEESSSSEEEEEETTS
T ss_pred CcchhhceEEeeecCCCCCcceEEEeCCCCe---EEEEeccCCeEEEEeCCC
Confidence 112222111001223456675 5676 777778888999999875
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.17 E-value=4.9 Score=34.07 Aligned_cols=190 Identities=17% Similarity=0.039 Sum_probs=90.1
Q ss_pred CeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEE-----------CCeEEEEECCCCce
Q 019349 59 SLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL-----------REKTYIYDANTLAI 125 (342)
Q Consensus 59 ~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~-----------d~~i~i~d~~~~~~ 125 (342)
+.+.+.||. .. ..-+.+.++|..+++....-..+. .-.++....+.+++.. .+.+.+||..+.+-
T Consensus 25 ~~i~v~GG~-~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 25 RLIYTAGGY-FR-QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCEEEECCB-SS-SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CEEEEEeCc-CC-CCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 445555542 11 124678999998876543322222 1122333355555543 13588899877532
Q ss_pred eeEEeCCCCCceEEEEeeCCCccEEEEeCCCC---ccEEEEEEccCCcee--EEEecccCCeeEEEECCCCCEEEEEeCC
Q 019349 126 LDTIDTVPNLKGLCAFSPSLNACFLAVPASTT---KGSVLVYNVMELHSH--CEIDAHQAPLAAIVLSSNGMYIATASEQ 200 (342)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~g~i~iwd~~~~~~~--~~~~~h~~~v~~i~~s~dg~~lat~s~d 200 (342)
...-..+.......+... ++..++.+|... ...+.+||..+.+=. ..+......-.++.+ ++.+++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCC
Confidence 111111111112222222 345666665311 135888998776421 112211111222333 67777777754
Q ss_pred Cc----EEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019349 201 GT----IIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 259 (342)
Q Consensus 201 g~----~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~~ 259 (342)
+. .+.+||+.+.+-.. +.....+..-.+++.. +++ +++.|+.+ ..+.+||+++.
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~~---iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRM-ITAMNTIRSGAGVCVL-HNC---IYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE-TTE---EEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCcCceEEEEeCCCCeEee-CCCCCCccccceEEEE-CCE---EEEEeCCCCCCccceEEEEeCCCC
Confidence 32 14588987765321 1111111111122222 566 77777654 56888987654
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.85 E-value=5.5 Score=34.01 Aligned_cols=102 Identities=12% Similarity=0.097 Sum_probs=58.8
Q ss_pred CCCccEEEEeCCCC------------ccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEe---CCCcEEEEEE
Q 019349 144 SLNACFLAVPASTT------------KGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATAS---EQGTIIRVFL 208 (342)
Q Consensus 144 ~~~~~~l~~~~~~~------------~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s---~dg~~irlwd 208 (342)
++++..|.++.... ...|+..++...+...... .+ +..|+++|++|+-.. .+...|..-+
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~ 135 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSLYRIR 135 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEEEEEE
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceEEEEE
Confidence 34455777665211 3578888887665332221 11 236788999999876 2333344555
Q ss_pred cCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeC-CCcEEEEecCCCC
Q 019349 209 VSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS-SGSLHVFSPGFAI 260 (342)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~-dg~i~vwd~~~~~ 260 (342)
+. |.....+..+ . + .+|+++++ .|.-.+. ...|++-+++...
T Consensus 136 ~d-Gs~~~~lt~~--~--~--~~~~~~g~---~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 136 ID-GEEKKKIKNH--Y--L--FTCNTSDR---YFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp TT-SCCCEEEESS--C--C--CCSEEETT---EEEEECTTTCCEEEEETTTTE
T ss_pred CC-CCCeEEEeCC--C--c--eEeeEECC---EEEEEeCCCceEEEEECCCCC
Confidence 54 3333444322 1 1 46788888 6776655 5678888876654
No 328
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.73 E-value=4.2 Score=40.90 Aligned_cols=33 Identities=27% Similarity=0.235 Sum_probs=28.6
Q ss_pred eEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCC
Q 019349 226 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 261 (342)
Q Consensus 226 ~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~ 261 (342)
.+.+++..++.. ++.+-+.|+++|||++.++..
T Consensus 237 ~~~~~~~~~~~~---~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYN---VLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTT---EEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCc---EEEEEECCCEEEEEECCCCCe
Confidence 367788888888 999999999999999988764
No 329
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.54 E-value=6.6 Score=34.30 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=53.8
Q ss_pred EEEEeeCCCccEEEEeCCCCccEEEEEEccCCc-eeEEEe---cccCCeeEEEECCC---CCEE-EEEeC---C----Cc
Q 019349 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVMELH-SHCEID---AHQAPLAAIVLSSN---GMYI-ATASE---Q----GT 202 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~-~~~~~~---~h~~~v~~i~~s~d---g~~l-at~s~---d----g~ 202 (342)
...+++.|++.++++. ..|.|+++| ..++ .+..+. ........|+|+|+ +..| ++-+. + +.
T Consensus 31 P~~ia~~pdG~l~V~e---~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTE---RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp EEEEEEEETTEEEEEE---TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CeEEEEcCCCeEEEEe---CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3455556667655543 358899987 3443 222221 12346889999997 4444 44332 2 34
Q ss_pred EEEEEEcCCC-------eeE-EEeccCcCceeEEEEEEecCCCcccEEEEEe
Q 019349 203 IIRVFLVSEA-------TKS-YSFRRGTYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 203 ~irlwd~~~~-------~~~-~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
+ ..|+...+ +.+ ..+... .......|+|.||+. ++++.+
T Consensus 107 v-~r~~~~~~~~~~~~~~~l~~~~~~~-~~h~~~~l~~~pDG~---Lyvt~G 153 (354)
T 3a9g_A 107 V-IRGRLDGSTFKLKEVKTLIDGIPGA-YIHNGGRIRFGPDGM---LYITTG 153 (354)
T ss_dssp E-EEEEECSSSCCEEEEEEEEEEEECC-SSCCCCCEEECTTSC---EEEECC
T ss_pred E-EEEEECCCCcCcCccEEEEEcCCCC-CCcCCceEEECCCCc---EEEEEC
Confidence 4 45776543 111 123211 111246799999998 555543
No 330
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.24 E-value=7 Score=34.06 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=55.8
Q ss_pred EEEEeeCCCccEEEEeCCCCccEEEEEEccCCce--eEEEe---cccCCeeEEEECCC---CCEEEEEeC-C-----CcE
Q 019349 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--HCEID---AHQAPLAAIVLSSN---GMYIATASE-Q-----GTI 203 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~--~~~~~---~h~~~v~~i~~s~d---g~~lat~s~-d-----g~~ 203 (342)
...+++.|++.++++. ..|.|.+++ .++. +..+. ........|+|+|+ +..|..+.. . +++
T Consensus 33 P~~ia~~pdG~l~V~e---~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 33 PWALAFLPDGGMLIAE---RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp EEEEEECTTSCEEEEE---TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred ceEEEEcCCCeEEEEe---CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4466777888766554 358999998 3332 22221 12346789999998 444444433 2 444
Q ss_pred EEEEEcCCCe-----eEE-Eecc-CcCceeEEEEEEecCCCcccEEEEEe
Q 019349 204 IRVFLVSEAT-----KSY-SFRR-GTYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 204 irlwd~~~~~-----~~~-~~~~-~~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
..|+...+. .+. .+.. .........|+|.||+. ++++.+
T Consensus 108 -~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~---Lyv~~G 153 (352)
T 2ism_A 108 -VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM---LYVTTG 153 (352)
T ss_dssp -EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC---EEEECC
T ss_pred -EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC---EEEEEC
Confidence 467776431 122 2321 11111246799999998 555543
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.12 E-value=8.7 Score=34.91 Aligned_cols=104 Identities=8% Similarity=0.065 Sum_probs=55.5
Q ss_pred ceEEEEEcCCeEEEEE--C-CeEEEEECCCCceee--EEeCC----CCCceEEEEeeCCC----ccEEEEeCC------C
Q 019349 96 SILAVRLNKKRLVIVL--R-EKTYIYDANTLAILD--TIDTV----PNLKGLCAFSPSLN----ACFLAVPAS------T 156 (342)
Q Consensus 96 ~v~~i~~~~~~~~~~~--d-~~i~i~d~~~~~~~~--~~~~~----~~~~~~~~~~~~~~----~~~l~~~~~------~ 156 (342)
...++++.++..++++ . +.|++++..+++... .+... ....++..++.+|+ +.+.++-.. .
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 5678888887655544 3 368888765554322 22111 12346677788773 333222210 0
Q ss_pred C----ccEEEEEEccCC-------ceeE-EEec-ccCCeeEEEECCCCCEEEEEeC
Q 019349 157 T----KGSVLVYNVMEL-------HSHC-EIDA-HQAPLAAIVLSSNGMYIATASE 199 (342)
Q Consensus 157 ~----~g~i~iwd~~~~-------~~~~-~~~~-h~~~v~~i~~s~dg~~lat~s~ 199 (342)
. ...|.-++.... +.+. .+.. .......|+|.|||.+.++-++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 0 235666665432 1111 1221 1234688999999998777553
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.86 E-value=6.6 Score=35.71 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=57.0
Q ss_pred eEEEEeeCCCccEEEEeCCCCccEEEEEEccCCce--eEEEec------ccCCeeEEEECCC---CCEEEEEe-C-----
Q 019349 137 GLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--HCEIDA------HQAPLAAIVLSSN---GMYIATAS-E----- 199 (342)
Q Consensus 137 ~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~--~~~~~~------h~~~v~~i~~s~d---g~~lat~s-~----- 199 (342)
...++++.|++.++++.- ..+.|.+++..+++. +..+.. ....+..|+|+|| +..|..+. .
T Consensus 28 ~P~~~a~~pdG~l~V~e~--~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTER--ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEEEc--CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345777788888777653 235788887655543 222221 2456779999995 44444433 2
Q ss_pred -------CCcEEEEEEcCCC-------eeEE-EeccCcCceeEEEEEEecCCCcccEEEEEe
Q 019349 200 -------QGTIIRVFLVSEA-------TKSY-SFRRGTYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 200 -------dg~~irlwd~~~~-------~~~~-~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
...+. -|+...+ +.+. .+... ..+....|+|.||+. ++++.+
T Consensus 106 ~~~~~~~~~~v~-r~~~~~~~~~~~~~~~i~~~~p~~-~~H~~~~l~f~pDG~---Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIR-RYTYNKSTDTLEKPVDLLAGLPSS-KDHQSGRLVIGPDQK---IYYTIG 162 (454)
T ss_dssp --CCSCEEEEEE-EEEEETTTTEEEEEEEEEEEECCC-SSCCEEEEEECTTSC---EEEEEC
T ss_pred CccccccccEEE-EEEECCCCCCcCCcEEEEEcCCCC-CCCCCCeEeECCCCe---EEEEEC
Confidence 12333 3444321 1222 23221 123378899999998 555544
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.46 E-value=7.4 Score=32.98 Aligned_cols=184 Identities=12% Similarity=0.042 Sum_probs=83.9
Q ss_pred EEEEcCCCCEEEEEcC--------Cc----EEEEeCCCCcEEEEEee-CCEE-EEEEcCCCCeEEEEcCCC--CCCCCCC
Q 019349 12 FVSFNQDNSGFALSTK--------DG----FKIFDSSTGRLCYERAV-GAFS-IVEMLYSSSLLAIVGAGE--QPSLSPR 75 (342)
Q Consensus 12 ~l~fs~d~~~la~g~~--------~g----~~v~d~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~g~--~~~~~d~ 75 (342)
......++..++.|+. .. +.+||+.+.+-...... .... ...... .+.+.+.||.. ......+
T Consensus 39 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 117 (315)
T 4asc_A 39 VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLD 117 (315)
T ss_dssp EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCC
T ss_pred eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccc
Confidence 3344457777666652 11 45678877653221111 1111 011111 34555555521 1112346
Q ss_pred eEEEEECCCCcEEEEEecCC--ceEEEEEcCCeEEEEEC--------CeEEEEECCCCceeeEEeCCCCCceEEEEeeCC
Q 019349 76 RLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVLR--------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 76 ~i~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (342)
.+.++|..+++....-..+. .-.++....+.+++... +.+.+||..+.+=...-..+.......+...
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 195 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-- 195 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--
T ss_pred eEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--
Confidence 79999998876543222222 11233334555666541 3689999877532111011111112222222
Q ss_pred CccEEEEeCCCCc---cEEEEEEccCCcee--EEEecccCCeeEEEECCCCCEEEEEeCC
Q 019349 146 NACFLAVPASTTK---GSVLVYNVMELHSH--CEIDAHQAPLAAIVLSSNGMYIATASEQ 200 (342)
Q Consensus 146 ~~~~l~~~~~~~~---g~i~iwd~~~~~~~--~~~~~h~~~v~~i~~s~dg~~lat~s~d 200 (342)
++..++.+|.... ..+.+||+.+.+=. ..+........++.+ +++.++.|+.+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 3456666663221 36888998876422 111111111122323 56777777753
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.38 E-value=13 Score=35.77 Aligned_cols=195 Identities=10% Similarity=0.053 Sum_probs=96.3
Q ss_pred CeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEE-e-----cCC---ceEEEEEc-CCeEEEEE--C------CeEEEEEC
Q 019349 59 SLLAIVGAGEQPSLSPRRLCLFNTTTGTALREL-N-----FLT---SILAVRLN-KKRLVIVL--R------EKTYIYDA 120 (342)
Q Consensus 59 ~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~-~-----~~~---~v~~i~~~-~~~~~~~~--d------~~i~i~d~ 120 (342)
+.+.+.||... ..-+.+.++|..+++....- . .+. .-..+.+. .+.+++.+ + +.+.+||.
T Consensus 398 ~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 398 NDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 44555554211 23467889999888765433 2 111 12333342 55666654 1 35788998
Q ss_pred CCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCcee--EE---EecccCCeeEEEECCC-CCEE
Q 019349 121 NTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH--CE---IDAHQAPLAAIVLSSN-GMYI 194 (342)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~--~~---~~~h~~~v~~i~~s~d-g~~l 194 (342)
.+.+=...-..+.......+... .++..++++|.+..+.+.+||..+.+=. .. +......-.++.+..+ ++.+
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 77521111011111112222221 2456777777533337999998876421 11 1111122234556655 6777
Q ss_pred EEEeC--CC----cEEEEEEcCCCee-----EEEeccC-cCceeEEEEEEecCCCcccEEEEEeC--------CCcEEEE
Q 019349 195 ATASE--QG----TIIRVFLVSEATK-----SYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSS--------SGSLHVF 254 (342)
Q Consensus 195 at~s~--dg----~~irlwd~~~~~~-----~~~~~~~-~~~~~v~~l~fs~d~~~~~~l~~~s~--------dg~i~vw 254 (342)
+.|+. ++ .-+..||+.+.+- -..+... ..+..-.+++...+++ +++.|+. ...|.+|
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~---iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK---LLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE---EEEECCBCSSCCCCTTTSEEEE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE---EEEECCccCCCCCCCCCeEEEE
Confidence 77775 22 1246889887761 1111110 0010111233334366 6777763 3468899
Q ss_pred ecCCC
Q 019349 255 SPGFA 259 (342)
Q Consensus 255 d~~~~ 259 (342)
|+++.
T Consensus 632 d~~t~ 636 (695)
T 2zwa_A 632 DPLSE 636 (695)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 88754
No 335
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.26 E-value=8.7 Score=33.46 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=19.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEe
Q 019349 9 PVFFVSFNQDNSGFALSTKDGFKIFD 34 (342)
Q Consensus 9 ~V~~l~fs~d~~~la~g~~~g~~v~d 34 (342)
....++|.|||+++++-....+.+++
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR 57 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE
Confidence 45799999999976665554467777
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.12 E-value=14 Score=35.62 Aligned_cols=196 Identities=9% Similarity=0.027 Sum_probs=94.5
Q ss_pred CCCCEEEEEcCC-----cEEEEeCCCCcEEEEE-e-------eCCEEEEEEcCC-CCeEEEEcCCCCCCCCCCeEEEEEC
Q 019349 17 QDNSGFALSTKD-----GFKIFDSSTGRLCYER-A-------VGAFSIVEMLYS-SSLLAIVGAGEQPSLSPRRLCLFNT 82 (342)
Q Consensus 17 ~d~~~la~g~~~-----g~~v~d~~~~~~~~~~-~-------~~~~~~~~~~~~-~~~~~~~~~g~~~~~~d~~i~iwd~ 82 (342)
-++..++.|+.+ .+.+||+.+.+..... . ............ .+.+.+.||...+...-+.+.++|.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456666666532 3577888776543222 1 111111122221 4455555553222112356889999
Q ss_pred CCCcEEEEEecCC---ceEEEEEcCCeEEEEEC----CeEEEEECCCCceeeEEeC----CCCCceEEEEeeCCC-ccEE
Q 019349 83 TTGTALRELNFLT---SILAVRLNKKRLVIVLR----EKTYIYDANTLAILDTIDT----VPNLKGLCAFSPSLN-ACFL 150 (342)
Q Consensus 83 ~~~~~~~~~~~~~---~v~~i~~~~~~~~~~~d----~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~l 150 (342)
.+++....-..+. .-..+.+..+.+++.+. +.+.+||..+.+=. .+.. +.......++..+.+ +..+
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~-~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK-DVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE-ECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE-EccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8876543322221 12223334566666551 27899999875311 1111 111122222332333 5566
Q ss_pred EEeCCCCc-----cEEEEEEccCCce-----eEEEec---ccCCeeEEEECCCCCEEEEEeCC--------CcEEEEEEc
Q 019349 151 AVPASTTK-----GSVLVYNVMELHS-----HCEIDA---HQAPLAAIVLSSNGMYIATASEQ--------GTIIRVFLV 209 (342)
Q Consensus 151 ~~~~~~~~-----g~i~iwd~~~~~~-----~~~~~~---h~~~v~~i~~s~dg~~lat~s~d--------g~~irlwd~ 209 (342)
+++|...+ ..+.+||+.+.+- -..+.. ....-.+++...+++.++.|+.+ .. +.+||.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEEEC
Confidence 67764222 4689999987761 111211 11111122333337788888743 23 468999
Q ss_pred CCCee
Q 019349 210 SEATK 214 (342)
Q Consensus 210 ~~~~~ 214 (342)
.+.+-
T Consensus 634 ~t~~W 638 (695)
T 2zwa_A 634 LSETL 638 (695)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87754
No 337
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.68 E-value=8.3 Score=32.37 Aligned_cols=176 Identities=11% Similarity=0.071 Sum_probs=84.3
Q ss_pred CeEEEEECCCCcEEEEEecCCc--eEEEEEcCCeEEEEE--C-----CeEEEEECCCCceeeEEeCCCCCceEEEEeeCC
Q 019349 75 RRLCLFNTTTGTALRELNFLTS--ILAVRLNKKRLVIVL--R-----EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL 145 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~~--v~~i~~~~~~~~~~~--d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (342)
+.+.++|..+++....-..+.+ -.++....+.+++.. + +.+.+||..+.+-...-..+.......+...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--
Confidence 5688999988764433222221 122333455666654 1 3688899877642211111111112222222
Q ss_pred CccEEEEeCCCC---ccEEEEEEccCCcee--EEEecccCCeeEEEECCCCCEEEEEeCCCc------EEEEEEcCCCee
Q 019349 146 NACFLAVPASTT---KGSVLVYNVMELHSH--CEIDAHQAPLAAIVLSSNGMYIATASEQGT------IIRVFLVSEATK 214 (342)
Q Consensus 146 ~~~~l~~~~~~~---~g~i~iwd~~~~~~~--~~~~~h~~~v~~i~~s~dg~~lat~s~dg~------~irlwd~~~~~~ 214 (342)
++..++++|.+. -..+.+||+.+.+=. ..+........++.+ +++.++.|+.++. .+.+||..+.+-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 344556665321 146888998776422 112211111222222 5677777764321 145899887653
Q ss_pred EEEeccCcCceeEEEEEEecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019349 215 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 259 (342)
Q Consensus 215 ~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d-----g~i~vwd~~~~ 259 (342)
... .....+..-.+++. -+++ +++.|+.+ +.+.+||+++.
T Consensus 186 ~~~-~~~p~~r~~~~~~~-~~~~---iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYI-AEMSTRRSGAGVGV-LNNL---LYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEE-CCCSSCCBSCEEEE-ETTE---EEEECCBSSSSBCCCEEEEETTTT
T ss_pred EEC-CCCccccccccEEE-ECCE---EEEECCCCCCcccceEEEEeCCCC
Confidence 221 11111111112222 2566 77777654 46888887654
No 338
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.50 E-value=10 Score=33.11 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=57.5
Q ss_pred EEEEeeCCCccEEEEeCCCCccEEEEEEccCCce--eEEE----ecccCCeeEEEECCC----CCEEEEEe--CCCcEEE
Q 019349 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--HCEI----DAHQAPLAAIVLSSN----GMYIATAS--EQGTIIR 205 (342)
Q Consensus 138 ~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~--~~~~----~~h~~~v~~i~~s~d----g~~lat~s--~dg~~ir 205 (342)
...+++.|++.++++.- ..|.|++++...++. +..+ .........|+|+|| +.+.++-+ .++++.|
T Consensus 34 P~~ia~~pdG~llVter--~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSR--DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp EEEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred ceEEEEcCCCcEEEEEe--cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 45667778887777653 368999998665543 2222 123456889999995 44433322 3445543
Q ss_pred EEEcCCC----------eeEE-EeccCcCceeEEEEEEecCCCcccEEEEEe
Q 019349 206 VFLVSEA----------TKSY-SFRRGTYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 206 lwd~~~~----------~~~~-~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
|....+ +.+. .+... ..+.-..|+|.||+. ++++.+
T Consensus 112 -~~~~~~~~~~~~~~~~~~i~~~~p~~-~~H~g~~l~fgpDG~---Lyvt~G 158 (347)
T 3das_A 112 -MLYDEKKPSGEQLGAPDTVFRGIPKG-VIHNGGRIAFGPDKM---LYAGTG 158 (347)
T ss_dssp -EEBCTTSCTTCCBCCCEEEEEEECCC-SSCCCCCEEECTTSC---EEEECB
T ss_pred -EEeCCCCcccccCCCcEEEEEcCCCC-CCccCccccCCCCCC---EEEEEC
Confidence 554431 2222 23221 112245699999998 555544
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=88.38 E-value=12 Score=32.35 Aligned_cols=139 Identities=14% Similarity=0.016 Sum_probs=66.5
Q ss_pred CeEEEEECCCCcEEEEEecCC--ce-EEEEEcCCeEEEEE--------CCeEEEEEC--CCCceeeEEeCCCCC---ceE
Q 019349 75 RRLCLFNTTTGTALRELNFLT--SI-LAVRLNKKRLVIVL--------REKTYIYDA--NTLAILDTIDTVPNL---KGL 138 (342)
Q Consensus 75 ~~i~iwd~~~~~~~~~~~~~~--~v-~~i~~~~~~~~~~~--------d~~i~i~d~--~~~~~~~~~~~~~~~---~~~ 138 (342)
+.+.++|..+.+....-..+. .- .++....+.+++.. .+.+.+||+ .+.+= ..+.....+ ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W-~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKW-NKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEE-EECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcE-EecCCCCCCcccccc
Confidence 689999999887654433332 22 34445566666653 235777887 33211 111111111 122
Q ss_pred EEEeeCCCccEEEEeCCCCc--------------------cEEEEEEccCCc--eeEEEecccCCeeEEEECCCCCEEEE
Q 019349 139 CAFSPSLNACFLAVPASTTK--------------------GSVLVYNVMELH--SHCEIDAHQAPLAAIVLSSNGMYIAT 196 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~~~~~--------------------g~i~iwd~~~~~--~~~~~~~h~~~v~~i~~s~dg~~lat 196 (342)
.+... ++.+++++|...+ ..+.+||+.+.+ .+..+......-.++. .+++.++.
T Consensus 247 ~~~~~--~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 322 (357)
T 2uvk_A 247 FAGIS--NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLII 322 (357)
T ss_dssp EEEEE--TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEE
T ss_pred eEEEE--CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEE
Confidence 22222 2446666663111 257889987654 3333332222222232 46788888
Q ss_pred EeCCCc-----EEEEEEcCCCeeEEEe
Q 019349 197 ASEQGT-----IIRVFLVSEATKSYSF 218 (342)
Q Consensus 197 ~s~dg~-----~irlwd~~~~~~~~~~ 218 (342)
|+.++. -+.++++++++.+...
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 886531 1234588777765543
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.77 E-value=13 Score=32.36 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=74.5
Q ss_pred CceEEEEEcCCeEEEEE---CCeEEEEECCCCceeeEEeC----CCCCceEEEEeeCCC----cc-EEEEeCCCCccEEE
Q 019349 95 TSILAVRLNKKRLVIVL---REKTYIYDANTLAILDTIDT----VPNLKGLCAFSPSLN----AC-FLAVPASTTKGSVL 162 (342)
Q Consensus 95 ~~v~~i~~~~~~~~~~~---d~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~-~l~~~~~~~~g~i~ 162 (342)
.....|++.++..++++ .++|++++..+++....... .....+...++.+|+ +. ++.++.. .++.|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-CCCEEE
Confidence 46788999887644444 46888887665543211111 122356777888774 32 2333322 345677
Q ss_pred EEEccCC----------cee-EEEe-cccCCeeEEEECCCCCEEEEEeC-------------CCcEEEEEEcCCCe----
Q 019349 163 VYNVMEL----------HSH-CEID-AHQAPLAAIVLSSNGMYIATASE-------------QGTIIRVFLVSEAT---- 213 (342)
Q Consensus 163 iwd~~~~----------~~~-~~~~-~h~~~v~~i~~s~dg~~lat~s~-------------dg~~irlwd~~~~~---- 213 (342)
-|.+... +.+ ..+. .....-..|+|.|||.+.++-++ .|.++|+ +.. |+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi-~~d-G~ip~~ 188 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRM-TPD-GEPAPG 188 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEE-CTT-SSBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEE-eCC-CCccCC
Confidence 6766541 111 1232 11123467999999998777542 3565543 432 22
Q ss_pred ------eEEEeccCcCceeEEEEEEecCCC
Q 019349 214 ------KSYSFRRGTYPSTIFSLSFGQSMQ 237 (342)
Q Consensus 214 ------~~~~~~~~~~~~~v~~l~fs~d~~ 237 (342)
.+.. .+. .....++|+|++.
T Consensus 189 nPf~~~~i~a--~G~--RNp~Gla~dp~G~ 214 (347)
T 3das_A 189 NPFPGSPVYS--YGH--RNVQGLAWDDKQR 214 (347)
T ss_dssp CSSTTCCEEE--BCC--SBCCEEEECTTCC
T ss_pred CCCCCCeEEe--eCC--CCcceEEECCCCC
Confidence 1222 222 2356799999887
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.55 E-value=12 Score=31.65 Aligned_cols=186 Identities=9% Similarity=0.101 Sum_probs=87.0
Q ss_pred EEEEEcCCcEEEEeCCCCcEEEEEee---CCEEEEEEcCCCCeEEEEcCCC-CC----CCCCCeEEEEECCCCcEEEEEe
Q 019349 21 GFALSTKDGFKIFDSSTGRLCYERAV---GAFSIVEMLYSSSLLAIVGAGE-QP----SLSPRRLCLFNTTTGTALRELN 92 (342)
Q Consensus 21 ~la~g~~~g~~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~-~~----~~~d~~i~iwd~~~~~~~~~~~ 92 (342)
.++.|+ ..+..||+.+.+-...... ..........+ +.+.+.||.. +. ......+..+|..+++....-.
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEEEEECTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc-cceEEECCCCCceecccCCccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344444 4578999988865432111 11222223333 4444555411 00 0112347889988876543222
Q ss_pred cCC--ceEEEEEcCCeEEEEE--C-------CeEEEEECCCCceeeEEeCCCCC-ceEEEEeeCCCccEEEEeCCCC---
Q 019349 93 FLT--SILAVRLNKKRLVIVL--R-------EKTYIYDANTLAILDTIDTVPNL-KGLCAFSPSLNACFLAVPASTT--- 157 (342)
Q Consensus 93 ~~~--~v~~i~~~~~~~~~~~--d-------~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~--- 157 (342)
.+. .-.++....+.+++.. + +.+.+||..+.+=.. +...+.+ ....++.. ++...+.+|...
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVISH--NGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEEE--TTEEEEECCEESSSC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEEE--CCEEEEEcCCCCCCC
Confidence 222 1122333355566554 2 357888887653221 1111111 11222222 345666665311
Q ss_pred -ccEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCCCc----EEEEEEcCCCe
Q 019349 158 -KGSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQGT----IIRVFLVSEAT 213 (342)
Q Consensus 158 -~g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~----~irlwd~~~~~ 213 (342)
...+.+||+.+.+= +..+......-.++.+ +++.++.|+.++. .+.+||+.+.+
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 23589999887642 2112111111122323 5678888775432 24578887764
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=85.31 E-value=18 Score=31.43 Aligned_cols=143 Identities=8% Similarity=0.055 Sum_probs=0.0
Q ss_pred CceEEEEEcCCeE-EEEE--CCeEEEEECCCCceeeEEeCCC-----CCceEEEEeeCCC---ccEEEEeCCCC------
Q 019349 95 TSILAVRLNKKRL-VIVL--REKTYIYDANTLAILDTIDTVP-----NLKGLCAFSPSLN---ACFLAVPASTT------ 157 (342)
Q Consensus 95 ~~v~~i~~~~~~~-~~~~--d~~i~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~l~~~~~~~------ 157 (342)
.....|++.++.. +.+. .++|++++ .+++....+.... ...+...++.+|+ +..|.++.. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~-~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~-~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQ-AGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS-EVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEE-TTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEE-EECSSSC
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEe-CCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEe-CCCCCCC
Q ss_pred -ccEEEEEEccCC----ceeEEE-------ecccCCeeEEEECCCCCEEEEEeCCCc------------EEEEEEcCCC-
Q 019349 158 -KGSVLVYNVMEL----HSHCEI-------DAHQAPLAAIVLSSNGMYIATASEQGT------------IIRVFLVSEA- 212 (342)
Q Consensus 158 -~g~i~iwd~~~~----~~~~~~-------~~h~~~v~~i~~s~dg~~lat~s~dg~------------~irlwd~~~~- 212 (342)
...|..|++... .....+ ......-..|+|.|||.+.++-+..+. .|.-++....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Q ss_pred -----------eeEEEeccCcCceeEEEEEEec-CCCcccEEEE
Q 019349 213 -----------TKSYSFRRGTYPSTIFSLSFGQ-SMQFQDILVA 244 (342)
Q Consensus 213 -----------~~~~~~~~~~~~~~v~~l~fs~-d~~~~~~l~~ 244 (342)
.....+..+... ...++|+| ++. ++++
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rn--p~gl~~d~~~g~---l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRN--PQGMAMNPWSNA---LWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSE--EEEEEEETTTTE---EEEE
T ss_pred CCCCCCcCCCCCCccEEEEcCcC--ccceEEECCCCC---EEEE
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=84.48 E-value=5.2 Score=37.42 Aligned_cols=69 Identities=10% Similarity=0.069 Sum_probs=47.6
Q ss_pred EeeCCCccEEEEeCCCCccEEEEEEccCCce-------------eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEE
Q 019349 141 FSPSLNACFLAVPASTTKGSVLVYNVMELHS-------------HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVF 207 (342)
Q Consensus 141 ~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~-------------~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlw 207 (342)
+..+||+.+++.+|. -+.++.++|.+.... +...+ -.-.....+|.++|+-..|---|..++ -|
T Consensus 328 v~vsPDGkyi~v~GK-LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv-kW 404 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGK-LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV-KW 404 (638)
T ss_dssp EEECTTSCEEEEECT-TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE-EE
T ss_pred eeeCCCCCEEEEcCC-CCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE-EE
Confidence 355788999999987 789999999874211 12222 223456788999995555556787765 79
Q ss_pred EcCCC
Q 019349 208 LVSEA 212 (342)
Q Consensus 208 d~~~~ 212 (342)
++...
T Consensus 405 ni~~a 409 (638)
T 3sbq_A 405 NMEEA 409 (638)
T ss_dssp EHHHH
T ss_pred eccHH
Confidence 98653
No 344
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.96 E-value=4.1 Score=33.19 Aligned_cols=65 Identities=15% Similarity=0.079 Sum_probs=38.8
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeE--------EEEEEecCCCcccEEEEEeCCCcE
Q 019349 180 APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTI--------FSLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 180 ~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v--------~~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
..+..++|+|+|.+.+. .+|.+ .-.+..+.+.. .+.. . ...| .++.|.|++. +.++ .||.|
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~L-y~~~~~t~~~~-~W~~-s-~t~IG~~Gw~~F~a~~fD~~G~---LYav--~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKI-YKGTPPTHDND-NWMG-R-AKKIGNGGWNQFQFLFFDPNGY---LYAV--SKDKL 109 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEE-EEESCCCSTTC-CHHH-H-CEEEECSCGGGCSEEEECTTSC---EEEE--ETTEE
T ss_pred ccceeEEECCCccEEEE--eCCeE-EEECCCCCCcc-cccc-c-ccEecccccccceEEEECCCCC---EEEe--CCCEE
Confidence 36789999999997777 56654 23444332110 0100 0 1123 6789999997 5555 55888
Q ss_pred EEEe
Q 019349 252 HVFS 255 (342)
Q Consensus 252 ~vwd 255 (342)
+-++
T Consensus 110 yr~~ 113 (236)
T 1tl2_A 110 YKAS 113 (236)
T ss_dssp EEES
T ss_pred EEeC
Confidence 7665
No 345
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=83.59 E-value=23 Score=31.29 Aligned_cols=151 Identities=10% Similarity=0.096 Sum_probs=84.4
Q ss_pred CCeEEEEcCCCCC------C---CCCCeEEEEECCCC--cEEEEEecCC-------ceEEEEEc---C-----CeEEEEE
Q 019349 58 SSLLAIVGAGEQP------S---LSPRRLCLFNTTTG--TALRELNFLT-------SILAVRLN---K-----KRLVIVL 111 (342)
Q Consensus 58 ~~~~~~~~~g~~~------~---~~d~~i~iwd~~~~--~~~~~~~~~~-------~v~~i~~~---~-----~~~~~~~ 111 (342)
.+.++++-.|... . ...-+|.+||++++ +.+..+.++. ...++.++ + +..+..+
T Consensus 97 ~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYIt 176 (381)
T 3q6k_A 97 CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYIT 176 (381)
T ss_dssp TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEE
T ss_pred CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEE
Confidence 4566666555321 1 23458999999999 9999998753 35677776 1 3444444
Q ss_pred ---CCeEEEEECCCCceeeEEeCCCC----------------CceEEEEeeCCC----ccEEEEeCCCCccEEEEEE---
Q 019349 112 ---REKTYIYDANTLAILDTIDTVPN----------------LKGLCAFSPSLN----ACFLAVPASTTKGSVLVYN--- 165 (342)
Q Consensus 112 ---d~~i~i~d~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~----~~~l~~~~~~~~g~i~iwd--- 165 (342)
...|.+||+.+++.-+....... ..++..++.+|+ +..|.+..- ....+.--.
T Consensus 177 D~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl-ss~~ly~V~T~~ 255 (381)
T 3q6k_A 177 NFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG-SAIKVYSVNTKE 255 (381)
T ss_dssp ETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES-SCSEEEEEEHHH
T ss_pred cCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC-CCCcEEEEEHHH
Confidence 46899999998876554421111 124555555554 445554432 111222222
Q ss_pred ccCCc---eeEEEeccc---CCeeEEEEC-CCCCEEEEEeCCCcEEEEEEcCC
Q 019349 166 VMELH---SHCEIDAHQ---APLAAIVLS-SNGMYIATASEQGTIIRVFLVSE 211 (342)
Q Consensus 166 ~~~~~---~~~~~~~h~---~~v~~i~~s-~dg~~lat~s~dg~~irlwd~~~ 211 (342)
++... .+..+ +.. ..-..+++. .+|.++.+--+... |..|+..+
T Consensus 256 L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a-I~~w~~~~ 306 (381)
T 3q6k_A 256 LKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQ-VSCWNTQK 306 (381)
T ss_dssp HSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSE-EEEEETTS
T ss_pred hhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCe-EEEEeCCC
Confidence 11211 12222 222 223345675 67777777766665 57999875
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.35 E-value=13 Score=37.24 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=32.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEe
Q 019349 181 PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 218 (342)
Q Consensus 181 ~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~ 218 (342)
.+.+++..++..+|.|-+.|++ +|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeee
Confidence 5677888888899999999998 599999999988765
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=80.41 E-value=25 Score=29.59 Aligned_cols=179 Identities=11% Similarity=0.125 Sum_probs=81.4
Q ss_pred EEcCCCCEEEEEcC----Cc--------EEEEeCCCCcEEEEEee----CCEEEEEEcCCCCeEEEEcCCC-CCCCCCCe
Q 019349 14 SFNQDNSGFALSTK----DG--------FKIFDSSTGRLCYERAV----GAFSIVEMLYSSSLLAIVGAGE-QPSLSPRR 76 (342)
Q Consensus 14 ~fs~d~~~la~g~~----~g--------~~v~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~-~~~~~d~~ 76 (342)
....++..++.|+. ++ +.+||+.+.+....... .....+.. .+.+.+.||.. ......+.
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEE
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE---CCEEEEEcCccCCCCcccce
Confidence 33456777777762 11 45678776643321111 11112221 34555555421 01112356
Q ss_pred EEEEECCCCcEEEEEecCCce--EEEEEcCCeEEEEE--------CCeEEEEECCCCceeeEEeCCCCCc-eEEEEeeCC
Q 019349 77 LCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--------REKTYIYDANTLAILDTIDTVPNLK-GLCAFSPSL 145 (342)
Q Consensus 77 i~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~~~~--------d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~ 145 (342)
+.++|..+++....-..+.+. .++....+.+++.. -+.+.+||+.+.+=. .+.....+. ...+...
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-- 205 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKTPRSMFGVAIH-- 205 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE--
T ss_pred EEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCCCcccceEEEE--
Confidence 889999887655433333211 12333455555544 135889998876322 111111111 1222222
Q ss_pred CccEEEEeCCCCc---cEEEEEEccCCce--eEEEecccCCeeEEEECCCCCEEEEEeCC
Q 019349 146 NACFLAVPASTTK---GSVLVYNVMELHS--HCEIDAHQAPLAAIVLSSNGMYIATASEQ 200 (342)
Q Consensus 146 ~~~~l~~~~~~~~---g~i~iwd~~~~~~--~~~~~~h~~~v~~i~~s~dg~~lat~s~d 200 (342)
++..++++|...+ ..+.+||+.+.+= +..++.......++.+ ++++++.|+.+
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFA 263 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCee
Confidence 3456666653222 4577899877642 2122211111122222 46677777654
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=79.57 E-value=36 Score=30.90 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=56.0
Q ss_pred EEEEeeCCCcc--EEEEeCCCCccEEEEEEccCC---ceeEEEe---------cccCCeeEEEECCC----CCEEEEEeC
Q 019349 138 LCAFSPSLNAC--FLAVPASTTKGSVLVYNVMEL---HSHCEID---------AHQAPLAAIVLSSN----GMYIATASE 199 (342)
Q Consensus 138 ~~~~~~~~~~~--~l~~~~~~~~g~i~iwd~~~~---~~~~~~~---------~h~~~v~~i~~s~d----g~~lat~s~ 199 (342)
-.++++.|++. ++++. ..|.|++++.... +.+..+. .....+..|+|+|+ +.+.++-+.
T Consensus 16 P~~~a~~pdG~~rl~V~e---r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE---KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp EEEEECCSSSSCCEEEEE---TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred ceEEEECCCCCeEEEEEe---CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 35667777774 56554 4689999975322 1222221 11356788999996 444444332
Q ss_pred C------------CcEEEEEEcCC----------CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeC
Q 019349 200 Q------------GTIIRVFLVSE----------ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS 247 (342)
Q Consensus 200 d------------g~~irlwd~~~----------~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~ 247 (342)
+ ..++ -|.+.. .+.+.++........-..|+|.||+. +.++.++
T Consensus 93 ~~~~~~~~~~~~~~~v~-r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~---LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVV-EYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF---LYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEE-EEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC---EEEEECC
T ss_pred CCCCcccCCcccceEEE-EEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc---EEEEeCC
Confidence 1 1233 355432 23344443212223367899999998 5555554
No 349
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=77.54 E-value=16 Score=35.02 Aligned_cols=69 Identities=22% Similarity=0.320 Sum_probs=45.5
Q ss_pred eeEEEE----CCCCC--EEEEEeCCCcEEEEEEcCCCe-------eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCC
Q 019349 182 LAAIVL----SSNGM--YIATASEQGTIIRVFLVSEAT-------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS 248 (342)
Q Consensus 182 v~~i~~----s~dg~--~lat~s~dg~~irlwd~~~~~-------~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d 248 (342)
.+.|+. .++|+ .+..|.++|+++|+.-...+. .+.++.....+.+|..|.|+++.. .|.+++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~---~LYV~t~~ 490 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ---QLYIGSTA 490 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTT---EEEEEBSS
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCC---EEEEEECC
Confidence 455655 23443 477889999998887654332 233443333455688999999998 99999988
Q ss_pred CcEEE
Q 019349 249 GSLHV 253 (342)
Q Consensus 249 g~i~v 253 (342)
+-++|
T Consensus 491 ~V~kV 495 (667)
T 4gz8_A 491 GVAQL 495 (667)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 76655
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.36 E-value=8 Score=39.73 Aligned_cols=31 Identities=26% Similarity=0.242 Sum_probs=26.3
Q ss_pred EEEEEEecCCCcccEEEEEeCCCcEEEEecCCCC
Q 019349 227 IFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 260 (342)
Q Consensus 227 v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~ 260 (342)
+.+++..++.. +|.+-+.|+++|||+++++.
T Consensus 240 ~vs~~~~~~~~---~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYN---VLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTT---EEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCcc---EEEEEeCCCEEEEEECCCCC
Confidence 45566777888 99999999999999998875
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=74.72 E-value=40 Score=28.84 Aligned_cols=61 Identities=10% Similarity=-0.026 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCCCCCCCeEEEEECCC--CcEEEEEecC-C--ceEEEEEcCCeEEEEE-C-----------CeEEEEEC
Q 019349 58 SSLLAIVGAGEQPSLSPRRLCLFNTTT--GTALRELNFL-T--SILAVRLNKKRLVIVL-R-----------EKTYIYDA 120 (342)
Q Consensus 58 ~~~~~~~~~g~~~~~~d~~i~iwd~~~--~~~~~~~~~~-~--~v~~i~~~~~~~~~~~-d-----------~~i~i~d~ 120 (342)
.+.+.+.||. ..+.+.++|..+ .+....-..+ . .-.+++...+.+++.. . +.+.+||.
T Consensus 19 ~~~iyv~GG~-----~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLGS-----AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECGG-----GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeCc-----CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 3455555552 356788999874 4433222222 1 1122333345555543 1 35888888
Q ss_pred CCC
Q 019349 121 NTL 123 (342)
Q Consensus 121 ~~~ 123 (342)
.+.
T Consensus 94 ~~~ 96 (357)
T 2uvk_A 94 KTN 96 (357)
T ss_dssp TTT
T ss_pred CCC
Confidence 775
No 352
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=74.60 E-value=41 Score=28.93 Aligned_cols=153 Identities=17% Similarity=0.213 Sum_probs=82.2
Q ss_pred CccEEEEeCCCCccEEEEEEccCCc-------eeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcC--C-----
Q 019349 146 NACFLAVPASTTKGSVLVYNVMELH-------SHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVS--E----- 211 (342)
Q Consensus 146 ~~~~l~~~~~~~~g~i~iwd~~~~~-------~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~--~----- 211 (342)
+..++++.. .+|.|+--.+.... ....++.. +.+..+........|+..+..|.++ .+.+. .
T Consensus 108 ~e~~~v~~T--~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~-rf~~~~~eip~~g 183 (327)
T 3uc1_A 108 DAPYLVLAT--RNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSI-RFSATDEALRPMG 183 (327)
T ss_dssp SSSEEEEEE--TTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEE-EEECCTTTSCCCC
T ss_pred CCCEEEEEc--CCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEE-EEECcccccCcCC
Confidence 345666665 57999998875432 12233333 3455554445556788888899876 45554 1
Q ss_pred ----CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCcccccccccccccccccccc
Q 019349 212 ----ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPA 287 (342)
Q Consensus 212 ----~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
|.....+. ....|.++..-+++. +|+..+..|.++.-.++.-...++.. .+...--+.+ .
T Consensus 184 r~a~Gv~~i~L~---~~d~Vv~~~~~~~~~---~ll~~T~~G~~Krt~l~e~~~~~R~~--~G~~~~~l~~--------~ 247 (327)
T 3uc1_A 184 RATSGVQGMRFN---IDDRLLSLNVVREGT---YLLVATSGGYAKRTAIEEYPVQGRGG--KGVLTVMYDR--------R 247 (327)
T ss_dssp TTSBCEESSCCC---TTCCEEEEEECCTTC---EEEEEETTSEEEEEEGGGSCBCCTTS--CCEESSCCCT--------T
T ss_pred cCCCCeeeecCC---CCCEEEEEEEECCCC---EEEEEeCCCcEEEEEHHHccccCcCC--CcEEEEEecC--------C
Confidence 11111121 123466665555555 79999999999998876544322110 0111100000 0
Q ss_pred ccceeeeccCCCccccEEEEEEeCCcEEEEEEe
Q 019349 288 DHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~ 320 (342)
+..+....+. .....|+..+.+|.+..|..+
T Consensus 248 ~d~lv~~~~~--~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 248 RGRLVGALIV--DDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TCSEEEEEEE--CTTCEEEEEEGGGCEEEEEGG
T ss_pred CCeEEEEEEe--CCCccEEEEcCCCeEEEEehh
Confidence 1111111111 123578899999999988764
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.68 E-value=8.9 Score=35.88 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=49.3
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEEEcCCCee-------------EEEeccCcCceeEEEEEEecCCCcccEEEEEeCC
Q 019349 182 LAAIVLSSNGMYIATASEQGTIIRVFLVSEATK-------------SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS 248 (342)
Q Consensus 182 v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~-------------~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d 248 (342)
...+.++|||++++.++.-...+-++|++.... ..+...+ .+ ....+|.++|. -..+---|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G--lG-PlHt~Fd~~G~---aYTtlfid 398 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG--LG-PLHTTFDGRGN---AYTTLFID 398 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC--SC-EEEEEECSSSE---EEEEETTT
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC--Cc-ccEEEECCCCc---eEeeeeec
Confidence 466889999999998875443457999874211 2222222 12 45689999986 55666689
Q ss_pred CcEEEEecCCC
Q 019349 249 GSLHVFSPGFA 259 (342)
Q Consensus 249 g~i~vwd~~~~ 259 (342)
..|--|+++..
T Consensus 399 SqvvkWni~~a 409 (638)
T 3sbq_A 399 SQVVKWNMEEA 409 (638)
T ss_dssp TEEEEEEHHHH
T ss_pred ceEEEEeccHH
Confidence 99999999764
No 354
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=72.85 E-value=46 Score=28.78 Aligned_cols=62 Identities=10% Similarity=0.094 Sum_probs=37.1
Q ss_pred CCeeEEEEC-------CCCCEEEEEeCCCcEEEEEEcCCC-eeE--EEeccCcCceeEEEEEEecCCCcccEEEEEe
Q 019349 180 APLAAIVLS-------SNGMYIATASEQGTIIRVFLVSEA-TKS--YSFRRGTYPSTIFSLSFGQSMQFQDILVATS 246 (342)
Q Consensus 180 ~~v~~i~~s-------~dg~~lat~s~dg~~irlwd~~~~-~~~--~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s 246 (342)
.....++|. .+|+++++.-..+. |...++... +.. ..+..+ ....+..+++.||+. ++++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~~pDG~---lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKN-VFGRLRDVVIDDDGG---ILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTT-TSCCEEEEEECTTSC---EEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccC-CCCCeeEEEECCCCc---EEEEEe
Confidence 356788883 56766666555555 456677643 221 233222 134588999999998 666554
No 355
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=70.94 E-value=16 Score=33.64 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=46.0
Q ss_pred CeeEEEECC----CC--CEEEEEeCCCcEEEEEEcCCCe-------eEEEeccCcCceeEEEEEEecCCCcccEEEEEeC
Q 019349 181 PLAAIVLSS----NG--MYIATASEQGTIIRVFLVSEAT-------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS 247 (342)
Q Consensus 181 ~v~~i~~s~----dg--~~lat~s~dg~~irlwd~~~~~-------~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~ 247 (342)
..++|+... |+ ..+..|..+|+++|+.-...+. .+.++.-...+.+|..|.|+++.. +|.+++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~---~Lyv~s~ 481 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ---QLYIGST 481 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT---EEEEEBS
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCC---EEEEEEC
Confidence 457776643 24 3477789999998887654331 333443322245689999999988 9999998
Q ss_pred CCcEEE
Q 019349 248 SGSLHV 253 (342)
Q Consensus 248 dg~i~v 253 (342)
++-++|
T Consensus 482 ~~V~~v 487 (495)
T 1q47_A 482 AGVAQL 487 (495)
T ss_dssp SCEEEE
T ss_pred CeEEEE
Confidence 876665
No 356
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=69.83 E-value=48 Score=27.67 Aligned_cols=149 Identities=14% Similarity=0.109 Sum_probs=82.4
Q ss_pred ccEEEEeCCCCccEEEEEEccCCc------eeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC---------
Q 019349 147 ACFLAVPASTTKGSVLVYNVMELH------SHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE--------- 211 (342)
Q Consensus 147 ~~~l~~~~~~~~g~i~iwd~~~~~------~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~--------- 211 (342)
..+++... .+|.|+-..+.... ....++. .+.+..+....+...|+..+..|.++ .+....
T Consensus 80 ~~~~v~~T--~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~-r~~~~eip~~gR~a~ 155 (276)
T 3no0_A 80 GNRLLLAT--KKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVA-RFSVREVPPSTPGAR 155 (276)
T ss_dssp CSEEEEEE--TTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEE-EEEGGGSCBCCTTCC
T ss_pred CCEEEEEe--CCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEE-EEEhhhCCCcCCCCC
Confidence 34555555 57999999875532 1222333 24455555555666888889999865 455421
Q ss_pred CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccce
Q 019349 212 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHV 291 (342)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
|.....+.. ...|.++...+++. .|+..+..|.++...++.-....+.. .+.. .+ ..+..+
T Consensus 156 Gv~~i~L~~---~d~vv~~~~~~~~~---~ll~~T~~G~~kr~~~~e~~~~~R~g--kGv~---------~i--~~~~~l 216 (276)
T 3no0_A 156 GVQGIKLEK---NDETSGLRIWNGEP---YLLVITAKGRVKKISHEEIPKTNRGV--KGTE---------VS--GTKDTL 216 (276)
T ss_dssp CEECCCCCT---TCCEEEEEEESSCS---EEEEEETTSCEEEEEGGGSCCCCTTC--CCEE---------CC--CSSSCE
T ss_pred CEEEEccCC---CCEEEEEEEeCCCC---EEEEEeCCCcEEEeEHHHcccCCCCC--cceE---------EE--cCCCcE
Confidence 112212221 23455555555555 78899999999999886544322210 0100 01 111122
Q ss_pred eeeccCCCccccEEEEEEeCCcEEE--EEEe
Q 019349 292 LRNAFPAGVKRASVSVITYNGYFVE--YIFS 320 (342)
Q Consensus 292 ~~~~~~~~~~~~~l~~~~~dg~v~~--~~~~ 320 (342)
....+. ..++.|+..+.+|.+.. |..+
T Consensus 217 v~~~~~--~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 217 VDLIPI--KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEE--SSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEe--CCCCEEEEEcCCCeEEEeeeCHH
Confidence 111111 12357999999999998 8754
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=64.79 E-value=28 Score=32.83 Aligned_cols=60 Identities=12% Similarity=0.120 Sum_probs=38.5
Q ss_pred eeEEEECCCCCEEEEEeCC----------C-cEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE
Q 019349 182 LAAIVLSSNGMYIATASEQ----------G-TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT 245 (342)
Q Consensus 182 v~~i~~s~dg~~lat~s~d----------g-~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~ 245 (342)
.-.|+|+|+|++++.-..+ + ..+-+.+..+|+. +.|..+...++++.++|+||++ .|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~---tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQK---TLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSS---EEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCC---EEEEE
Confidence 3568999999965543221 1 1222445555654 5555555678899999999998 66544
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=64.41 E-value=62 Score=26.96 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=72.4
Q ss_pred CceEEEEEcCCeEEEEECCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEEeCCCCccEEEEEEccCCceeEE
Q 019349 95 TSILAVRLNKKRLVIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE 174 (342)
Q Consensus 95 ~~v~~i~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~iwd~~~~~~~~~ 174 (342)
..|..|+....+.++..+++++.|-......+.. .. .....+..++... ...++. . +|.|..|-....-.+..
T Consensus 24 ~~i~~ia~G~~h~~~l~~G~v~~wG~n~~Gqlg~-p~-~~~~~i~~ia~G~-~hs~~l-~---~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLALKGGKVLGWGANLNGQLTM-PA-ATQSGVDAIAAGN-YHSLAL-K---DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SSCCEEEECSSEEEEEETTEEEEEECCSSSTTSC-CG-GGGSCCCEEEECS-SEEEEE-E---TTEEEEEECCTTSTTCC
T ss_pred CCCcEEEeCCCeEEEEECCEEEEEeCCCCCCCCC-Cc-cCCCCEEEEEeCC-CEEEEE-E---CCEEEEeeCCCCCCCCC
Confidence 3688888877776666688999998654321110 00 0111233444332 233443 1 58888886543211110
Q ss_pred EecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC-CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEE
Q 019349 175 IDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE-ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHV 253 (342)
Q Consensus 175 ~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~-~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~v 253 (342)
-..-...|..|+...+...+++ ||++ ..|-... +++-. .. .....|..++-..+.. ++. . ||.|+.
T Consensus 97 P~~~~~~v~~ia~G~~hs~al~---~G~v-~~wG~n~~gqlg~--~~-~~~~~i~~i~~G~~~~----~~l-~-~G~v~~ 163 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWASYALK---DGKV-IAWGDDSDGQTTV--PA-EAQSGVTALDGGVYTA----LAV-K-NGGVIA 163 (282)
T ss_dssp CGGGSSSEEEEEEETTEEEEEE---TTEE-EEEECCTTSTTSC--CG-GGGSSEEEEEECSSEE----EEE-E-TTEEEE
T ss_pred CcccCCCeEEEECcCCEEEEEe---CCeE-EEecCCCCCcCCC--Cc-cCCCCeEEEEcccCEE----EEE-E-CCEEEE
Confidence 0011246777777655333333 7775 5787643 22210 00 1123466666544332 333 3 688888
Q ss_pred EecCC
Q 019349 254 FSPGF 258 (342)
Q Consensus 254 wd~~~ 258 (342)
|--..
T Consensus 164 wG~n~ 168 (282)
T 3qhy_B 164 WGDNY 168 (282)
T ss_dssp EECCT
T ss_pred ecCCC
Confidence 87543
No 359
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=62.51 E-value=67 Score=26.73 Aligned_cols=165 Identities=10% Similarity=0.024 Sum_probs=85.0
Q ss_pred CCeEEEEECCCCcEEE-EEecCCceEEEEEcCCeEEEEECCeEEEEECCCCceeeEEeCCCCCceEEEEeeCCCccEEEE
Q 019349 74 PRRLCLFNTTTGTALR-ELNFLTSILAVRLNKKRLVIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAV 152 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~-~~~~~~~v~~i~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 152 (342)
+++|..|-....-++. .......|..|+....+.++..+++++.|-......+.. .... ...+..++...+. .++.
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~~G~v~~wG~n~~Gqlg~-P~~~-~~~v~~ia~G~~h-s~al 117 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDGEVIAWGGNEDGQTTV-PAEA-RSGVDAIAAGAWA-SYAL 117 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEETTEEEEEECCTTSTTCC-CGGG-SSSEEEEEEETTE-EEEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEECCEEEEeeCCCCCCCCC-Cccc-CCCeEEEECcCCE-EEEE
Confidence 4577777653321111 111234788898888877666799999998754321110 0000 1234455543332 3333
Q ss_pred eCCCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEEEEcCC-CeeEEEeccCcCceeEEEEE
Q 019349 153 PASTTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE-ATKSYSFRRGTYPSTIFSLS 231 (342)
Q Consensus 153 ~~~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irlwd~~~-~~~~~~~~~~~~~~~v~~l~ 231 (342)
. +|.|..|=....-.+..-......|..|+...+...++ . ||.+ ..|-... +++- .+. .....|..++
T Consensus 118 ~----~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~-~G~v-~~wG~n~~gqlg--~p~-~~~~~v~~i~ 186 (282)
T 3qhy_B 118 K----DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--K-NGGV-IAWGDNYFGQTT--VPA-EAQSGVDDVA 186 (282)
T ss_dssp E----TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--E-TTEE-EEEECCTTSTTS--CCG-GGGSSEEEEE
T ss_pred e----CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--E-CCEE-EEecCCCCCCCC--Cce-ecCCCeEEEE
Confidence 2 47899997543221111111234577777655433333 2 6775 5786653 2221 111 1123477777
Q ss_pred EecCCCcccEEEEEeCCCcEEEEecCC
Q 019349 232 FGQSMQFQDILVATSSSGSLHVFSPGF 258 (342)
Q Consensus 232 fs~d~~~~~~l~~~s~dg~i~vwd~~~ 258 (342)
-..+. .++. .||.|+.|--..
T Consensus 187 ~G~~h----s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 187 GGIFH----SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp ECSSE----EEEE--ETTEEEEEECCT
T ss_pred ecCCE----EEEE--ECCeEEEEECCC
Confidence 65544 3444 599999997544
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=56.33 E-value=1.4e+02 Score=28.65 Aligned_cols=239 Identities=14% Similarity=0.183 Sum_probs=118.6
Q ss_pred eEEEE-EcCCCCEEEEEcC-Cc-----EEEEeCCCCcEEEEE-e-eC-C-------EEEEEEcCCCCeEEEEcCCCCC--
Q 019349 10 VFFVS-FNQDNSGFALSTK-DG-----FKIFDSSTGRLCYER-A-VG-A-------FSIVEMLYSSSLLAIVGAGEQP-- 70 (342)
Q Consensus 10 V~~l~-fs~d~~~la~g~~-~g-----~~v~d~~~~~~~~~~-~-~~-~-------~~~~~~~~~~~~~~~~~~g~~~-- 70 (342)
...++ ++||+++++.+-+ .| ++++|+.+++.+-.. . .. . ...++|. +.+.+.+...-..+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 34555 8999998876532 22 599999998765211 1 00 0 1233554 33444443210000
Q ss_pred --CCCCCeEEEEECCCCc--EEEEEecCC-ce-EEEEEc--CCe----EEEEE-----CCeEEEEECCCC-ceeeEEeCC
Q 019349 71 --SLSPRRLCLFNTTTGT--ALRELNFLT-SI-LAVRLN--KKR----LVIVL-----REKTYIYDANTL-AILDTIDTV 132 (342)
Q Consensus 71 --~~~d~~i~iwd~~~~~--~~~~~~~~~-~v-~~i~~~--~~~----~~~~~-----d~~i~i~d~~~~-~~~~~~~~~ 132 (342)
.-...+|+.|.+.+.. ....+..+. .+ .+...+ +.. +++.. ...+++.+.... ..+..+..+
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 0124789999987653 222232222 22 223332 222 33322 235677776532 122333332
Q ss_pred CCCceEEEEeeCCCccEEEEeCCC--------CccEEEEEEccCCc-------eeEE-Ee-cccCCeeEEEECCCCCEEE
Q 019349 133 PNLKGLCAFSPSLNACFLAVPAST--------TKGSVLVYNVMELH-------SHCE-ID-AHQAPLAAIVLSSNGMYIA 195 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~~~~--------~~g~i~iwd~~~~~-------~~~~-~~-~h~~~v~~i~~s~dg~~la 195 (342)
.. ..+. .. .++.+++....+ ..+.|...|+.++. .... +. .....+..+.+..+ .+++
T Consensus 290 ~~-~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 290 SD-ATLQ--GS-FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp TT-CEEE--EE-ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred Cc-ceEe--ee-ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 22 1221 11 233344433211 35779999987642 2223 32 23346788888875 6777
Q ss_pred EEeCCCcE-EEEEEcCCCe-eEEE-eccCcCceeEEEEEEecCCCcccEEEEEeCC---CcEEEEecC
Q 019349 196 TASEQGTI-IRVFLVSEAT-KSYS-FRRGTYPSTIFSLSFGQSMQFQDILVATSSS---GSLHVFSPG 257 (342)
Q Consensus 196 t~s~dg~~-irlwd~~~~~-~~~~-~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~d---g~i~vwd~~ 257 (342)
+...+|.. ++++|+.+++ .... +... ..+.+....+++++. .++++.+.. +++..+|+.
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-~~~~~~~~~~~~~~~--~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLP-YQNAIFGMSSYEEEE--EALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCC-STTCEEEEECCTTCS--CEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCC-CCeEEEEEeecCcCC--EEEEEEecCCCCCEEEEEeCC
Confidence 77777642 4567776664 2222 2111 123466666777765 255555443 457777765
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.95 E-value=57 Score=30.57 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=38.3
Q ss_pred CeeEEEECCCCCEEE-EEeCC---------C-cEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEE
Q 019349 181 PLAAIVLSSNGMYIA-TASEQ---------G-TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT 245 (342)
Q Consensus 181 ~v~~i~~s~dg~~la-t~s~d---------g-~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~ 245 (342)
....|.|+++|.+.+ |=... + .-+...+..+|+. ..|......++++.++|+||++ .|.++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~k---tLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQK---TLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSS---EEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCC---EEEEE
Confidence 456799999998766 32110 1 1223556666764 3443333346799999999998 66655
No 362
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=54.67 E-value=1.2e+02 Score=27.33 Aligned_cols=104 Identities=12% Similarity=0.134 Sum_probs=56.9
Q ss_pred ceEEEEEcCCe---EEEEE-CCeEEEEECCCC---ceeeEEeCC-------CCCceEEEEeeCCC-----ccEEEEeCCC
Q 019349 96 SILAVRLNKKR---LVIVL-REKTYIYDANTL---AILDTIDTV-------PNLKGLCAFSPSLN-----ACFLAVPAST 156 (342)
Q Consensus 96 ~v~~i~~~~~~---~~~~~-d~~i~i~d~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~l~~~~~~ 156 (342)
....|++.++. ++++. .+.|++++.... ..+..+... ....++..++.+|+ ..+++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~- 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN- 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC-
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC-
Confidence 45778888775 66666 779999875322 122222111 11346777888876 334444321
Q ss_pred Cc----------cEEEEEEccC----------CceeEEEe--cccCCeeEEEECCCCCEEEEEeCC
Q 019349 157 TK----------GSVLVYNVME----------LHSHCEID--AHQAPLAAIVLSSNGMYIATASEQ 200 (342)
Q Consensus 157 ~~----------g~i~iwd~~~----------~~~~~~~~--~h~~~v~~i~~s~dg~~lat~s~d 200 (342)
.+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++-++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 2444466532 12233332 112345789999999987776653
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.26 E-value=22 Score=34.26 Aligned_cols=34 Identities=15% Similarity=0.278 Sum_probs=27.0
Q ss_pred EEcCCCCeEEEEcCCCCCCCCCCeEEEEECCCCcEEEEEec
Q 019349 53 EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNF 93 (342)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~d~~i~iwd~~~~~~~~~~~~ 93 (342)
.+.++..++++++. |+++|+||+++++++.+...
T Consensus 226 ~~~~~~~fLftL~~-------Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 226 CKLFHERYLIVLTQ-------NCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEETTTEEEEEET-------TCEEEEEETTTTEEEEEEET
T ss_pred EeccCCcEEEEEEc-------CCeEEEEEcCCCceEEeecc
Confidence 33455677777775 89999999999999988776
No 364
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=51.81 E-value=1.1e+02 Score=29.11 Aligned_cols=70 Identities=14% Similarity=0.185 Sum_probs=47.0
Q ss_pred CeeEEEEC----CCCC---EEEEEeCCCcEEEEEEcCCCe-eEEEeccCcCceeEEEEEEecCC--CcccEEEEEeCCCc
Q 019349 181 PLAAIVLS----SNGM---YIATASEQGTIIRVFLVSEAT-KSYSFRRGTYPSTIFSLSFGQSM--QFQDILVATSSSGS 250 (342)
Q Consensus 181 ~v~~i~~s----~dg~---~lat~s~dg~~irlwd~~~~~-~~~~~~~~~~~~~v~~l~fs~d~--~~~~~l~~~s~dg~ 250 (342)
..++|+.. .+|+ .+..|..+|+++|+-....+. .+.++..-....+|..|.|+++. . +|.+++.++-
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~---~Lyv~s~~~V 474 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNR---FVYAGSNSGV 474 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSC---EEEEECSSCE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCcc---EEEEEEcCeE
Confidence 35677663 4443 677889999998887665543 33333222223468889999987 7 8999998876
Q ss_pred EEE
Q 019349 251 LHV 253 (342)
Q Consensus 251 i~v 253 (342)
++|
T Consensus 475 ~~v 477 (663)
T 1olz_A 475 VQA 477 (663)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.30 E-value=15 Score=37.79 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=31.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEec
Q 019349 181 PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 219 (342)
Q Consensus 181 ~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~ 219 (342)
.+.+++..++..+|.|-+.|++ +|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEeec
Confidence 4556667788899999999998 5999999999887753
No 366
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=46.17 E-value=64 Score=30.31 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=40.7
Q ss_pred CEEEEEeCCCcEEEEEEcCCC----e-eEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEE
Q 019349 192 MYIATASEQGTIIRVFLVSEA----T-KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVF 254 (342)
Q Consensus 192 ~~lat~s~dg~~irlwd~~~~----~-~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vw 254 (342)
..+..|.++|++.|+.....+ . .+.++.....+.+|..|.++++.. .|.+++.++-++|-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~---~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERR---KLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTT---EEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCC---EEEEEecceEEEcc
Confidence 356678889998887765543 1 233443212345689999999988 89999888766654
No 367
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=45.33 E-value=2e+02 Score=26.93 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=92.0
Q ss_pred eEEEEECCCCcEEEEEecCC---c---------------eEEEEE-cCCe--EEEEE----CCeEEEEECCCCceee--E
Q 019349 76 RLCLFNTTTGTALRELNFLT---S---------------ILAVRL-NKKR--LVIVL----REKTYIYDANTLAILD--T 128 (342)
Q Consensus 76 ~i~iwd~~~~~~~~~~~~~~---~---------------v~~i~~-~~~~--~~~~~----d~~i~i~d~~~~~~~~--~ 128 (342)
.|.++|-.+|+.+.++.+.. . ..+++. +.+. ++++- -..+..||+.++++.. .
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 48999999999998877531 1 123332 3222 22222 1258889988876643 3
Q ss_pred EeCCCC---------CceEEEEeeCCCccE-EEEeCCCCccEEEEEEccCCceeEEE-ecccCCeeEEEECCC--CCEEE
Q 019349 129 IDTVPN---------LKGLCAFSPSLNACF-LAVPASTTKGSVLVYNVMELHSHCEI-DAHQAPLAAIVLSSN--GMYIA 195 (342)
Q Consensus 129 ~~~~~~---------~~~~~~~~~~~~~~~-l~~~~~~~~g~i~iwd~~~~~~~~~~-~~h~~~v~~i~~s~d--g~~la 195 (342)
+..... ...+.....+.|+.- |++++. ++| ..++.+.+. .+|...+..-.|.|+ |..+.
T Consensus 310 ~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-------~iD-~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~ 381 (591)
T 2zux_A 310 LDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-------AVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGLEVF 381 (591)
T ss_dssp EETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-------EEC-TTSCEEEECSCCCCSCEEEECCCTTSSSCEEE
T ss_pred ecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-------EEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCcEEE
Confidence 333211 112333333444332 222210 122 233333332 279888888899987 45677
Q ss_pred EEeCC-----CcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecCCC
Q 019349 196 TASEQ-----GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 259 (342)
Q Consensus 196 t~s~d-----g~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~ 259 (342)
.+.++ |. .+.|..+|+.+.......+.+......|.|+..+-++.+ ++ .+|+.+..
T Consensus 382 ~~~E~~~~~~G~--~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~pG~E~w~----~~--~l~~~~G~ 442 (591)
T 2zux_A 382 QVHEDKNAKYGL--SFRDAATGKILWGVYAGKDVGRGMAADIDPRYPGQEVWA----NG--SLYSAKGV 442 (591)
T ss_dssp EECCCTTSSCSE--EEEETTTCCEEEEECCSSCCCCEEEECCCTTSSSCEEEE----TT--EEECTTSC
T ss_pred EEecCCCCCCcc--EEEECCCCcEEEEcCCCCCCCceeEEecCCCCCceEEEe----cC--ceECCCCC
Confidence 77665 43 378999999998876443444455556777754212332 22 46776543
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=45.20 E-value=37 Score=32.71 Aligned_cols=70 Identities=9% Similarity=0.108 Sum_probs=44.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCc-------------eeEEEEEEecCCCcccEEEEEe-
Q 019349 181 PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP-------------STIFSLSFGQSMQFQDILVATS- 246 (342)
Q Consensus 181 ~v~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~-------------~~v~~l~fs~d~~~~~~l~~~s- 246 (342)
.|.++.+ +..+|+|=+.|.+ +|+|++++++++.+..-...+ ++.. ..- +. ++++-+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~L--rl~--~~---~lv~y~P 292 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYL--SLY--NN---TLVTLLP 292 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCE--EES--SS---EEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEeeccccCccccccccCcccCcchhH--hhe--ee---EEEEEec
Confidence 4666655 4689999999987 599999999987766432111 1111 111 13 555544
Q ss_pred -CCCcEEEEecCCCC
Q 019349 247 -SSGSLHVFSPGFAI 260 (342)
Q Consensus 247 -~dg~i~vwd~~~~~ 260 (342)
..|..++|++....
T Consensus 293 ~~~G~Fk~~~l~~~~ 307 (729)
T 3f7f_A 293 LENGLFQMGTLLVDS 307 (729)
T ss_dssp TTTCEEEEEEEEC--
T ss_pred CCCCeEEEEEEEEcC
Confidence 45789999986543
No 369
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=44.47 E-value=50 Score=20.87 Aligned_cols=29 Identities=21% Similarity=0.437 Sum_probs=20.6
Q ss_pred cEEEEEEeCCcEEEEEEecCCCCeeeeEEEeee
Q 019349 303 ASVSVITYNGYFVEYIFSINNCCESTWTLDREF 335 (342)
Q Consensus 303 ~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~~~ 335 (342)
+...+.- ||+++||.+++.+... .|.|.+
T Consensus 30 nhFgv~e-~g~iKIykyde~tNeI---~LkKE~ 58 (72)
T 3kvp_A 30 NHFGVME-DGYIKIYEYNESRNEV---KLKKEY 58 (72)
T ss_dssp TEEEEEE-TTEEEEEEEETTTTEE---EEEEEE
T ss_pred CEEEEEe-CCEEEEEEeCCCCCeE---EEEEee
Confidence 4455554 9999999999877753 555544
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.41 E-value=1.4e+02 Score=24.82 Aligned_cols=122 Identities=12% Similarity=0.130 Sum_probs=64.2
Q ss_pred cCCeeEEEECC-CCCEEEEEeCCCcEEEEEEcCC------CeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcE
Q 019349 179 QAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSE------ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL 251 (342)
Q Consensus 179 ~~~v~~i~~s~-dg~~lat~s~dg~~irlwd~~~------~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i 251 (342)
...|..+.... +..+++..+.+|. ++-..+.. |.....++. ...+..+....+.. .|+..+..|.+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~-iKr~~l~~~~~~~~G~~~i~lke---gD~l~~~~~~~~~~---~ill~T~~G~~ 139 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGY-VKKIPLAEFEYKAQGMPIIKLTE---GDEVVSIASSVDET---HILLFTKKGRV 139 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSE-EEEEEGGGTTTCSTTEECSCCCT---TCCEEEEEECCSSC---EEEEEETTSEE
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCE-EEEEEHHHhhhhcCCeEEEecCC---CCEEEEEEEeCCCC---EEEEEECCCEE
Confidence 44566654321 4678999999996 56666543 221112221 23455555554554 78889999999
Q ss_pred EEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEEeCCcEEEEEEe
Q 019349 252 HVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 320 (342)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~~~~ 320 (342)
..+.+..-....+. ..+...--+. .+..+....+ ..+...++.++.+|..+...++
T Consensus 140 ~r~~~~eip~~gR~--a~Gv~~i~L~---------~~d~vv~~~~--~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 140 ARFSVREVPPSTPG--ARGVQGIKLE---------KNDETSGLRI--WNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEEGGGSCBCCTT--CCCEECCCCC---------TTCCEEEEEE--ESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEEhhhCCCcCCC--CCCEEEEccC---------CCCEEEEEEE--eCCCCEEEEEeCCCcEEEeEHH
Confidence 99886543221110 0111000000 1111111111 1123578899999998888764
No 371
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=43.04 E-value=65 Score=29.92 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=43.3
Q ss_pred CeeEEEECCCC--CEEEEEeCCCcEEEEEEcCCC----eeEEEeccCcCceeEE-EEEEecCCCcccEEEEEeCCCcEEE
Q 019349 181 PLAAIVLSSNG--MYIATASEQGTIIRVFLVSEA----TKSYSFRRGTYPSTIF-SLSFGQSMQFQDILVATSSSGSLHV 253 (342)
Q Consensus 181 ~v~~i~~s~dg--~~lat~s~dg~~irlwd~~~~----~~~~~~~~~~~~~~v~-~l~fs~d~~~~~~l~~~s~dg~i~v 253 (342)
.+++|+....+ ..+..|..+|+++|+- +... ..+.++.-.....+|. .|.+++++. +|.+++.++-++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~-l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~---~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIR-ADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQL---YLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEE-EEETTTEEEEEEEEECCTTCCCCCSCCEECTTSS---EEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEE-eCCCCccceeEEEEEeecCCCccccceEEccCCC---eEEEEecccccee
Confidence 35666665433 4477788999988863 3322 2333443222234574 899999988 8999988765555
No 372
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=34.09 E-value=2.1e+02 Score=26.72 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=45.6
Q ss_pred CeeEEEECC----CC--CEEEEEeCCCcEEEEEEcCCC-------eeEEEeccC---------cCceeEEEEEEecCCCc
Q 019349 181 PLAAIVLSS----NG--MYIATASEQGTIIRVFLVSEA-------TKSYSFRRG---------TYPSTIFSLSFGQSMQF 238 (342)
Q Consensus 181 ~v~~i~~s~----dg--~~lat~s~dg~~irlwd~~~~-------~~~~~~~~~---------~~~~~v~~l~fs~d~~~ 238 (342)
..+.|++.. ++ ..+..|.++|++.|+...... ..+.++..- ..+.+|..|.++++..
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~- 482 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASG- 482 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGT-
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCC-
Confidence 357777764 23 457778899998787754321 123333211 1134588999999988
Q ss_pred ccEEEEEeCCCcEEEE
Q 019349 239 QDILVATSSSGSLHVF 254 (342)
Q Consensus 239 ~~~l~~~s~dg~i~vw 254 (342)
.|.+++.++-++|-
T Consensus 483 --~LYV~s~~~V~qVP 496 (565)
T 3oky_B 483 --SLYVAFSTCVIKVP 496 (565)
T ss_dssp --EEEEECSSCEEEEE
T ss_pred --EEEEEecCeEEEee
Confidence 89999998877764
No 373
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=33.82 E-value=3.3e+02 Score=26.17 Aligned_cols=94 Identities=9% Similarity=0.086 Sum_probs=52.5
Q ss_pred CCCeEEEEECCCCc-------EEEE-Eec--CCceEEEEEcCCeEEEEE--CC--eEEEEECCCCc-eeeE-EeCCCCCc
Q 019349 73 SPRRLCLFNTTTGT-------ALRE-LNF--LTSILAVRLNKKRLVIVL--RE--KTYIYDANTLA-ILDT-IDTVPNLK 136 (342)
Q Consensus 73 ~d~~i~iwd~~~~~-------~~~~-~~~--~~~v~~i~~~~~~~~~~~--d~--~i~i~d~~~~~-~~~~-~~~~~~~~ 136 (342)
..+.|...|+.++. .... +.. ...+.++.+.++.+++.. ++ .++++++.+++ .... +..+.. .
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~-~ 396 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ-N 396 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCST-T
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCC-e
Confidence 35678888876531 1122 322 236778899988877765 44 67888876664 2344 433321 1
Q ss_pred eEEEEeeCCC--ccEEEEeCCCCccEEEEEEcc
Q 019349 137 GLCAFSPSLN--ACFLAVPASTTKGSVLVYNVM 167 (342)
Q Consensus 137 ~~~~~~~~~~--~~~l~~~~~~~~g~i~iwd~~ 167 (342)
.+..++..++ ..++...+...-+.+..+|+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 397 AIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2333333333 333334443355788888876
No 374
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=33.00 E-value=1.6e+02 Score=27.62 Aligned_cols=39 Identities=8% Similarity=-0.000 Sum_probs=27.2
Q ss_pred cEEEEEEccCCceeEEEecc-cCCeeEEEECCCCCEEEEE
Q 019349 159 GSVLVYNVMELHSHCEIDAH-QAPLAAIVLSSNGMYIATA 197 (342)
Q Consensus 159 g~i~iwd~~~~~~~~~~~~h-~~~v~~i~~s~dg~~lat~ 197 (342)
..+.+.+..+++..+.+.++ ...++.++|+||++.|...
T Consensus 509 n~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 509 NQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34566666677665555554 3579999999998877665
No 375
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.48 E-value=1.9e+02 Score=27.06 Aligned_cols=39 Identities=8% Similarity=-0.019 Sum_probs=27.6
Q ss_pred EEEEEEccCCceeEEEecc-cCCeeEEEECCCCCEEEEEe
Q 019349 160 SVLVYNVMELHSHCEIDAH-QAPLAAIVLSSNGMYIATAS 198 (342)
Q Consensus 160 ~i~iwd~~~~~~~~~~~~h-~~~v~~i~~s~dg~~lat~s 198 (342)
.|..++..+++....+.+. ...++.++|+||++.|..+-
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5666676677655555443 35689999999998887763
No 376
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=29.98 E-value=2.3e+02 Score=23.14 Aligned_cols=147 Identities=15% Similarity=0.074 Sum_probs=68.1
Q ss_pred CccEEEEEEccCCce-eEEEecccCCeeEEEECCCCCEEEEEeCCCcEEEE--EEcCC----CeeEEEeccCcCceeEEE
Q 019349 157 TKGSVLVYNVMELHS-HCEIDAHQAPLAAIVLSSNGMYIATASEQGTIIRV--FLVSE----ATKSYSFRRGTYPSTIFS 229 (342)
Q Consensus 157 ~~g~i~iwd~~~~~~-~~~~~~h~~~v~~i~~s~dg~~lat~s~dg~~irl--wd~~~----~~~~~~~~~~~~~~~v~~ 229 (342)
.+|.|+--....... ...++.... +..+........|+..+..|.++++ +++.. |..+..+-.-.....|.+
T Consensus 10 ~~G~iKr~~~~~~~~~~~~lke~D~-l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~ 88 (256)
T 1zvt_A 10 QMGWVRSAKGHDIDAPGLNYKAGDS-FKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDH 88 (256)
T ss_dssp TTSEEEEEESSCCCSTTSCCCTTCC-EEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEE
T ss_pred CCCEEEEeeCCcCCceeccCCCCCE-EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEE
Confidence 357776554432110 112333333 3333333334456666778876432 33422 221100000011234666
Q ss_pred EEEecCCCcccEEEEEeCCCcEEEEecCCCCCCCCCCCccccccccccccccccccccccceeeeccCCCccccEEEEEE
Q 019349 230 LSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT 309 (342)
Q Consensus 230 l~fs~d~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (342)
+....++. +|+.++..|.++...+..-...++ .+...--+.+ +..+ +........++.|+.++
T Consensus 89 ~~~~~~~~---~lll~T~~G~~Kr~~~~e~~~~~r----~G~~~i~L~~---------~d~l-v~~~~~~~~~~~i~l~T 151 (256)
T 1zvt_A 89 MLMESDDQ---KLLMASDAGYGFVCTFNDLVARNR----AGKALITLPE---------NAHV-MPPVVIEDASDMLLAIT 151 (256)
T ss_dssp EECCCTTC---EEEEEBTTSEEEEEEGGGGCCCST----TCEECBCCCT---------TCCB-CCCEECCCTTCEEEEEE
T ss_pred EEEeCCCC---EEEEEeCCCeEEEeEHHHhcccCc----CceEEEEECC---------CCEE-EEEEEecCCCCEEEEEc
Confidence 64333455 788999999999999865432221 1100000110 0011 11111101235799999
Q ss_pred eCCcEEEEEEec
Q 019349 310 YNGYFVEYIFSI 321 (342)
Q Consensus 310 ~dg~v~~~~~~~ 321 (342)
.+|.+..|.++.
T Consensus 152 ~~G~~lrf~~~e 163 (256)
T 1zvt_A 152 QAGRMLMFPVSD 163 (256)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCeEEEEEHHH
Confidence 999999998753
No 377
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=29.88 E-value=1.4e+02 Score=20.72 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=32.6
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEEEcCCCeeEEEeccCcCceeEEEEEEecCCCcccEEEEEeCCCcEEEEecC
Q 019349 183 AAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 257 (342)
Q Consensus 183 ~~i~~s~dg~~lat~s~dg~~irlwd~~~~~~~~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg~i~vwd~~ 257 (342)
..+.+..||++++.....++ + +|...+... + .-..+.+..+|. +++ -..++.+ +|.-.
T Consensus 26 ~~L~~q~dGNLvL~~~~~~~-~-vWssnt~~~------~----~~~~l~l~~dGN---LVl-~d~~~~~-iW~S~ 83 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKTN-I-VWESGTSGR------G----QHCFMRLGHSGE---LDI-TDDRLNT-VFVSN 83 (113)
T ss_dssp EEEEECTTSCEEEEETTTTE-E-EEECCCTTS------C----SSCEEEECTTSC---EEE-ECTTSCE-EEECS
T ss_pred EEEEEcCCCEEEEEECCCCE-E-EEECCcccC------C----cCEEEEEeCCCc---EEE-ECCCCCE-EEECC
Confidence 44667788887776442343 3 787654310 1 113467888887 444 4445554 78644
No 378
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=25.40 E-value=99 Score=29.64 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=42.9
Q ss_pred eeEEEECCCC--CEEEEEeCCCcEEEEEEcCCC---eeEEEeccCcCceeE-EEEEEecCCCcccEEEEEeCCCcEEEE
Q 019349 182 LAAIVLSSNG--MYIATASEQGTIIRVFLVSEA---TKSYSFRRGTYPSTI-FSLSFGQSMQFQDILVATSSSGSLHVF 254 (342)
Q Consensus 182 v~~i~~s~dg--~~lat~s~dg~~irlwd~~~~---~~~~~~~~~~~~~~v-~~l~fs~d~~~~~~l~~~s~dg~i~vw 254 (342)
.++|+....+ ..+..|.++|++.|+--.... ..+.++.......+| ..|.++++.. +|.+++.++-++|-
T Consensus 401 lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~---~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 401 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQL---YLYVMSERQVTRVP 476 (681)
T ss_dssp BCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSS---EEEEECSSEEEEEE
T ss_pred eEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCC---EEEEEecCEEEEEE
Confidence 4555554433 346678889998776543322 233444222223445 6899999887 89999888766663
No 379
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=24.42 E-value=1.2e+02 Score=28.13 Aligned_cols=69 Identities=22% Similarity=0.262 Sum_probs=43.7
Q ss_pred eeEEEECC-CC-CEEEEEeCCCcEEEEEEcCCC--eeEEEeccCcCceeE-EEEEEecCCCcccEEEEEeCCCcEEEE
Q 019349 182 LAAIVLSS-NG-MYIATASEQGTIIRVFLVSEA--TKSYSFRRGTYPSTI-FSLSFGQSMQFQDILVATSSSGSLHVF 254 (342)
Q Consensus 182 v~~i~~s~-dg-~~lat~s~dg~~irlwd~~~~--~~~~~~~~~~~~~~v-~~l~fs~d~~~~~~l~~~s~dg~i~vw 254 (342)
.++|+... +| ..+..|..+|++.|+.-...+ ..+.++.- ....+| ..|.++++.. +|.+++.++-++|-
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~---~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFE---HLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSS---EEEEECSSCEEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCC---EEEEEeCCEEEEEE
Confidence 55665543 23 345568889998877654332 23344432 223456 4899999888 89999988777664
No 380
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=22.22 E-value=3.4e+02 Score=22.58 Aligned_cols=162 Identities=10% Similarity=0.063 Sum_probs=81.8
Q ss_pred CCeEEEEECCCCcEEEEEecCCceEEEEEcCCeEEEEEC---------------CeEEEEECCCCceeeEEeCCCCCceE
Q 019349 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVLR---------------EKTYIYDANTLAILDTIDTVPNLKGL 138 (342)
Q Consensus 74 d~~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (342)
++.|...+..... ...+.- ..+..+....+.++.+.. ..|+..++...+. ..+.. .+ .
T Consensus 36 ~~~ly~~~~dg~~-~~~l~~-~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~--~~--~ 108 (302)
T 3s25_A 36 NGRLYAMNIDGSN-IHKLSN-DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP--DP--C 108 (302)
T ss_dssp TTEEEEEETTSCS-CEEEEE-EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC--SC--E
T ss_pred CceEEEEcCCCCC-CEEccC-CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec--CC--c
Confidence 3455555543222 222221 123445555666665541 2566666655432 22221 11 1
Q ss_pred EEEeeCCCccEEEEeC--CCCccEEEEEEccCCceeEEEecccCCeeEEEECCCCCEEEEEeC-CCcEEEEEEcCCCeeE
Q 019349 139 CAFSPSLNACFLAVPA--STTKGSVLVYNVMELHSHCEIDAHQAPLAAIVLSSNGMYIATASE-QGTIIRVFLVSEATKS 215 (342)
Q Consensus 139 ~~~~~~~~~~~l~~~~--~~~~g~i~iwd~~~~~~~~~~~~h~~~v~~i~~s~dg~~lat~s~-dg~~irlwd~~~~~~~ 215 (342)
..+++ ++..|+... .+....|...++.... ...+..+.. .+++++|+.|.-.+. ..+ |.+-++..+...
T Consensus 109 ~~~s~--~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~-Iy~~~l~g~~~~ 180 (302)
T 3s25_A 109 IYASL--IGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQ-LYRYDTASQSEA 180 (302)
T ss_dssp EEEEE--ETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCC-EEEEETTTTEEE
T ss_pred cEEEE--eCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCce-EEEEECCCCCEE
Confidence 24444 344666654 1135667777776433 334444432 457889999887665 344 467777655433
Q ss_pred EEeccCcCceeEEEEEEecCCCcccEEEEEeCCC--cEEEEecCCC
Q 019349 216 YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG--SLHVFSPGFA 259 (342)
Q Consensus 216 ~~~~~~~~~~~v~~l~fs~d~~~~~~l~~~s~dg--~i~vwd~~~~ 259 (342)
.+..+ . .. ..++|++. +|+-....+ .|..-+++..
T Consensus 181 -~l~~~--~--~~-~~~~P~g~---~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 181 -LFYDC--N--CY-KPVVLDDT---NVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp -EEECS--C--EE-EEEEEETT---EEEEEEGGGTTEEEEECSSSC
T ss_pred -EEeCC--C--cc-ceeeecCC---EEEEEEcCCCcEEEEEECCCC
Confidence 33222 1 22 34679988 777665443 4555555443
Done!