Query 019353
Match_columns 342
No_of_seqs 274 out of 2342
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:47:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ooi_A Histone-lysine N-methyl 100.0 3.7E-35 1.3E-39 263.9 11.9 190 125-334 13-213 (232)
2 3ope_A Probable histone-lysine 100.0 1.2E-31 4.2E-36 239.6 13.2 164 153-335 23-195 (222)
3 3h6l_A Histone-lysine N-methyl 100.0 2.4E-31 8.2E-36 244.3 12.5 147 169-334 83-238 (278)
4 3f9x_A Histone-lysine N-methyl 100.0 9.8E-31 3.4E-35 223.8 14.7 133 192-334 14-155 (166)
5 3hna_A Histone-lysine N-methyl 100.0 1E-29 3.4E-34 234.9 6.6 130 196-334 134-268 (287)
6 2w5y_A Histone-lysine N-methyl 100.0 1.2E-28 4E-33 214.8 10.3 121 202-335 46-173 (192)
7 1mvh_A Cryptic LOCI regulator 100.0 1.5E-28 5.2E-33 228.4 11.7 130 197-334 125-265 (299)
8 3bo5_A Histone-lysine N-methyl 100.0 1.6E-28 5.5E-33 227.3 10.7 132 196-335 113-255 (290)
9 1ml9_A Histone H3 methyltransf 99.9 7.2E-28 2.4E-32 224.6 8.1 131 197-335 121-273 (302)
10 2r3a_A Histone-lysine N-methyl 99.9 1.2E-27 4E-32 222.2 7.8 127 196-332 127-265 (300)
11 2qpw_A PR domain zinc finger p 99.9 4.4E-26 1.5E-30 190.6 9.0 119 200-334 21-146 (149)
12 1n3j_A A612L, histone H3 lysin 99.9 1.1E-25 3.8E-30 181.9 5.4 110 207-336 3-112 (119)
13 2f69_A Histone-lysine N-methyl 99.9 4.2E-24 1.4E-28 194.6 11.5 112 209-334 110-235 (261)
14 1h3i_A Histone H3 lysine 4 spe 99.9 4.1E-23 1.4E-27 192.0 11.7 112 208-333 163-288 (293)
15 3ep0_A PR domain zinc finger p 99.8 7.8E-21 2.7E-25 161.6 11.5 122 206-336 25-150 (170)
16 3s8p_A Histone-lysine N-methyl 99.8 2.6E-21 8.8E-26 175.7 4.7 110 207-334 130-250 (273)
17 3db5_A PR domain zinc finger p 99.8 3.5E-19 1.2E-23 149.2 10.1 120 206-335 21-145 (151)
18 3rq4_A Histone-lysine N-methyl 99.8 1.6E-19 5.6E-24 162.2 8.4 113 206-334 101-221 (247)
19 3dal_A PR domain zinc finger p 99.8 6.5E-19 2.2E-23 152.7 9.7 119 205-333 55-177 (196)
20 3ray_A PR domain-containing pr 99.6 1.1E-15 3.9E-20 135.1 10.6 114 206-333 70-186 (237)
21 3ihx_A PR domain zinc finger p 99.6 1.8E-15 6E-20 126.5 5.8 104 218-333 30-142 (152)
22 1mm2_A MI2-beta; PHD, zinc fin 99.4 3.3E-13 1.1E-17 95.1 5.0 52 23-77 5-56 (61)
23 1xwh_A Autoimmune regulator; P 99.4 2.1E-13 7.1E-18 97.8 4.0 53 24-79 5-57 (66)
24 1f62_A Transcription factor WS 99.4 1.6E-13 5.6E-18 93.2 3.2 49 29-77 2-50 (51)
25 1fp0_A KAP-1 corepressor; PHD 99.4 8.4E-13 2.9E-17 99.0 7.1 58 18-78 16-73 (88)
26 2e6r_A Jumonji/ARID domain-con 99.4 2.7E-13 9.2E-18 103.5 3.8 60 18-77 7-66 (92)
27 2l5u_A Chromodomain-helicase-D 99.4 2.9E-13 9.8E-18 95.4 3.2 53 23-78 7-59 (61)
28 2yql_A PHD finger protein 21A; 99.4 4E-13 1.4E-17 93.1 3.8 51 23-76 5-55 (56)
29 2lri_C Autoimmune regulator; Z 99.3 5.9E-13 2E-17 95.0 4.4 51 25-78 10-60 (66)
30 2puy_A PHD finger protein 21A; 99.3 8.9E-13 3.1E-17 92.6 3.1 50 25-77 3-52 (60)
31 2yt5_A Metal-response element- 99.3 5.7E-13 1.9E-17 95.6 2.0 57 23-79 2-63 (66)
32 2k16_A Transcription initiatio 99.3 1.3E-12 4.5E-17 96.1 3.5 58 20-77 11-68 (75)
33 3asl_A E3 ubiquitin-protein li 99.3 2.3E-12 7.9E-17 93.2 4.6 49 29-77 20-69 (70)
34 2e6s_A E3 ubiquitin-protein li 99.3 3.4E-12 1.2E-16 93.9 5.6 48 29-76 28-76 (77)
35 2l43_A N-teminal domain from h 99.2 1.1E-12 3.8E-17 99.2 1.2 54 23-78 21-76 (88)
36 2ku3_A Bromodomain-containing 99.2 2.6E-12 8.9E-17 93.0 2.0 55 21-77 10-66 (71)
37 1wev_A Riken cDNA 1110020M19; 99.2 4.3E-12 1.5E-16 96.1 2.0 55 24-78 13-73 (88)
38 3shb_A E3 ubiquitin-protein li 99.2 1.1E-11 3.6E-16 91.1 3.6 48 29-76 28-76 (77)
39 2lv9_A Histone-lysine N-methyl 99.2 2.7E-11 9.3E-16 93.5 5.8 50 27-78 28-77 (98)
40 1wen_A Inhibitor of growth fam 99.2 4.6E-11 1.6E-15 86.5 6.5 54 21-78 10-66 (71)
41 3u5n_A E3 ubiquitin-protein li 99.1 1.8E-11 6.3E-16 107.6 4.5 53 23-78 3-55 (207)
42 1weu_A Inhibitor of growth fam 99.1 1.4E-10 4.7E-15 87.7 7.5 53 22-78 31-86 (91)
43 3o36_A Transcription intermedi 99.1 4.5E-11 1.5E-15 103.2 5.1 50 26-78 3-52 (184)
44 3o70_A PHD finger protein 13; 99.1 5.7E-11 1.9E-15 85.3 3.6 61 15-77 7-67 (68)
45 2vnf_A ING 4, P29ING4, inhibit 99.1 2.9E-11 9.9E-16 84.7 1.8 52 22-77 5-59 (60)
46 3c6w_A P28ING5, inhibitor of g 99.1 3.4E-11 1.2E-15 84.0 1.9 51 23-77 5-58 (59)
47 2kwj_A Zinc finger protein DPF 99.1 7.4E-11 2.5E-15 93.8 3.9 58 20-77 51-108 (114)
48 3ask_A E3 ubiquitin-protein li 99.1 6.4E-11 2.2E-15 103.9 3.8 50 28-77 175-225 (226)
49 3v43_A Histone acetyltransfera 99.0 2E-10 7E-15 91.0 5.4 58 20-77 54-112 (112)
50 2g6q_A Inhibitor of growth pro 99.0 5.8E-11 2E-15 83.6 2.0 52 22-77 6-60 (62)
51 2ro1_A Transcription intermedi 99.0 2.1E-10 7.1E-15 99.3 4.4 49 27-78 2-50 (189)
52 2ysm_A Myeloid/lymphoid or mix 99.0 4.4E-10 1.5E-14 88.9 4.9 59 20-78 47-105 (111)
53 4gne_A Histone-lysine N-methyl 98.9 4.7E-10 1.6E-14 87.5 3.7 53 20-77 8-62 (107)
54 2jmi_A Protein YNG1, ING1 homo 98.9 5.7E-10 2E-14 84.1 3.1 50 23-76 22-75 (90)
55 1wee_A PHD finger family prote 98.9 8.9E-10 3E-14 80.1 3.6 55 24-79 13-68 (72)
56 1wew_A DNA-binding family prot 98.9 9.2E-10 3.2E-14 81.3 3.5 55 23-78 12-73 (78)
57 1we9_A PHD finger family prote 98.8 8.9E-10 3E-14 78.3 2.5 55 24-78 3-59 (64)
58 2rsd_A E3 SUMO-protein ligase 98.8 1.8E-09 6.2E-14 77.5 3.0 54 23-77 6-65 (68)
59 1wem_A Death associated transc 98.7 9.5E-10 3.2E-14 80.9 -0.3 53 27-80 16-73 (76)
60 3o7a_A PHD finger protein 13 v 98.7 4.7E-09 1.6E-13 71.2 2.4 46 30-76 6-51 (52)
61 1x4i_A Inhibitor of growth pro 98.6 6.1E-09 2.1E-13 75.0 1.6 50 24-77 3-55 (70)
62 2lbm_A Transcriptional regulat 98.6 4.4E-09 1.5E-13 85.9 0.9 52 23-77 59-117 (142)
63 2ysm_A Myeloid/lymphoid or mix 98.6 3.9E-08 1.3E-12 77.6 5.0 53 23-75 3-55 (111)
64 1wep_A PHF8; structural genomi 98.6 1.6E-08 5.4E-13 74.8 2.2 53 26-79 11-65 (79)
65 2vpb_A Hpygo1, pygopus homolog 98.6 7E-09 2.4E-13 73.5 -0.3 52 24-75 5-64 (65)
66 2xb1_A Pygopus homolog 2, B-ce 98.5 2.1E-08 7.1E-13 78.2 1.5 51 28-78 4-62 (105)
67 2kgg_A Histone demethylase jar 98.5 1.5E-08 5.1E-13 68.7 0.2 47 29-75 4-52 (52)
68 3kqi_A GRC5, PHD finger protei 98.5 2.3E-08 7.9E-13 73.2 0.6 53 26-78 8-62 (75)
69 2ri7_A Nucleosome-remodeling f 98.4 1.9E-08 6.5E-13 85.8 -1.2 55 23-78 4-60 (174)
70 3ql9_A Transcriptional regulat 98.4 2.2E-08 7.7E-13 80.3 -1.5 52 23-77 53-111 (129)
71 3kv5_D JMJC domain-containing 98.1 2.3E-07 7.9E-12 91.1 -1.7 56 23-78 32-89 (488)
72 3n71_A Histone lysine methyltr 98.0 2.1E-06 7.2E-11 84.8 4.0 44 279-332 201-255 (490)
73 3qwp_A SET and MYND domain-con 98.0 2.6E-06 9E-11 82.7 4.5 43 278-332 201-243 (429)
74 3lqh_A Histone-lysine N-methyl 98.0 8.1E-07 2.8E-11 76.0 0.4 53 27-79 2-65 (183)
75 2kwj_A Zinc finger protein DPF 97.9 1.6E-06 5.6E-11 68.5 0.3 48 28-75 2-59 (114)
76 3qww_A SET and MYND domain-con 97.9 1.1E-05 3.7E-10 78.5 5.4 43 279-333 202-244 (433)
77 3kv4_A PHD finger protein 8; e 97.8 9.1E-07 3.1E-11 85.7 -2.9 53 27-79 4-58 (447)
78 3v43_A Histone acetyltransfera 97.7 3.9E-06 1.3E-10 66.1 -0.7 49 27-75 5-62 (112)
79 3pur_A Lysine-specific demethy 97.6 1.5E-05 5.1E-10 77.9 1.7 40 38-77 54-94 (528)
80 1wil_A KIAA1045 protein; ring 97.2 9.4E-05 3.2E-09 53.8 1.4 52 26-78 14-77 (89)
81 4bbq_A Lysine-specific demethy 96.8 0.00038 1.3E-08 54.9 1.8 50 29-78 61-115 (117)
82 2ku7_A MLL1 PHD3-CYP33 RRM chi 96.1 0.0016 5.5E-08 52.2 1.5 38 41-78 1-45 (140)
83 3qxy_A N-lysine methyltransfer 96.0 0.0052 1.8E-07 59.7 4.6 41 279-331 223-263 (449)
84 2h21_A Ribulose-1,5 bisphospha 95.9 0.0033 1.1E-07 60.9 2.8 46 279-332 190-242 (440)
85 3rsn_A SET1/ASH2 histone methy 95.5 0.0093 3.2E-07 50.1 3.6 47 32-78 9-60 (177)
86 3a1b_A DNA (cytosine-5)-methyl 94.6 0.0086 2.9E-07 49.3 0.9 49 27-78 79-135 (159)
87 3smt_A Histone-lysine N-methyl 94.1 0.03 1E-06 55.1 3.6 34 208-241 93-126 (497)
88 4gne_A Histone-lysine N-methyl 92.2 0.071 2.4E-06 41.1 2.4 39 29-71 60-98 (107)
89 2pv0_B DNA (cytosine-5)-methyl 91.7 0.027 9.3E-07 53.1 -0.5 50 26-78 92-149 (386)
90 3k1l_B Fancl; UBC, ring, RWD, 88.7 0.21 7.3E-06 46.3 2.7 55 23-77 304-370 (381)
91 1vyx_A ORF K3, K3RING; zinc-bi 87.4 0.056 1.9E-06 37.0 -1.5 53 23-77 2-56 (60)
92 1iym_A EL5; ring-H2 finger, ub 86.4 0.36 1.2E-05 31.6 2.2 48 26-77 4-52 (55)
93 3n71_A Histone lysine methyltr 85.6 0.63 2.2E-05 45.4 4.4 36 205-240 4-39 (490)
94 3qww_A SET and MYND domain-con 84.6 0.84 2.9E-05 43.8 4.6 33 207-239 6-38 (433)
95 2kiz_A E3 ubiquitin-protein li 83.9 0.21 7.2E-06 34.5 0.0 51 23-77 10-60 (69)
96 2ect_A Ring finger protein 126 83.3 0.96 3.3E-05 31.9 3.4 51 23-77 11-61 (78)
97 1x4j_A Ring finger protein 38; 82.7 0.27 9.3E-06 34.7 0.2 50 24-77 20-69 (75)
98 2d8s_A Cellular modulator of i 82.6 0.6 2.1E-05 33.7 2.1 52 24-77 12-67 (80)
99 2ct0_A Non-SMC element 1 homol 82.4 0.49 1.7E-05 33.8 1.5 48 26-77 14-61 (74)
100 2l0b_A E3 ubiquitin-protein li 81.5 0.38 1.3E-05 35.5 0.6 49 25-77 38-86 (91)
101 2lq6_A Bromodomain-containing 79.1 0.61 2.1E-05 34.3 1.1 31 27-58 17-49 (87)
102 3qwp_A SET and MYND domain-con 78.8 1.6 5.6E-05 41.6 4.3 32 208-239 5-36 (429)
103 1weq_A PHD finger protein 7; s 78.7 2.1 7.3E-05 31.2 3.8 35 40-77 44-79 (85)
104 2ecm_A Ring finger and CHY zin 78.3 0.42 1.5E-05 31.2 -0.0 48 26-77 4-52 (55)
105 2ecl_A Ring-box protein 2; RNF 76.2 0.77 2.6E-05 33.0 0.9 48 26-77 14-73 (81)
106 2ep4_A Ring finger protein 24; 74.1 0.52 1.8E-05 33.0 -0.5 51 23-77 11-61 (74)
107 4bbq_A Lysine-specific demethy 73.8 0.85 2.9E-05 35.2 0.6 38 27-78 7-44 (117)
108 1v87_A Deltex protein 2; ring- 72.8 1.2 3.9E-05 34.0 1.2 51 27-77 25-91 (114)
109 2d8t_A Dactylidin, ring finger 67.8 2.4 8E-05 29.3 1.8 47 24-77 12-58 (71)
110 3smt_A Histone-lysine N-methyl 67.4 3.8 0.00013 40.0 3.8 41 280-331 274-314 (497)
111 4a0k_B E3 ubiquitin-protein li 66.7 1.3 4.5E-05 34.4 0.3 47 27-77 48-109 (117)
112 1wvo_A Sialic acid synthase; a 66.6 2.1 7.2E-05 30.8 1.3 16 312-327 8-23 (79)
113 2ecj_A Tripartite motif-contai 64.5 4.1 0.00014 26.4 2.4 47 24-74 12-58 (58)
114 2ysl_A Tripartite motif-contai 64.4 3.8 0.00013 28.1 2.3 51 23-77 16-66 (73)
115 3qxy_A N-lysine methyltransfer 61.5 5.9 0.0002 38.0 3.9 35 208-242 38-73 (449)
116 3dpl_R Ring-box protein 1; ubi 60.9 1.9 6.5E-05 32.8 0.2 48 26-77 36-98 (106)
117 2ecy_A TNF receptor-associated 60.3 3.5 0.00012 27.8 1.5 48 24-77 12-59 (66)
118 2egp_A Tripartite motif-contai 60.3 9.3 0.00032 26.4 3.9 50 25-77 10-62 (79)
119 1e8j_A Rubredoxin; iron-sulfur 59.5 9.2 0.00031 25.0 3.3 18 60-78 29-46 (52)
120 3nw0_A Non-structural maintena 58.6 5 0.00017 35.2 2.5 48 26-77 179-226 (238)
121 1bor_A Transcription factor PM 58.1 11 0.00038 24.5 3.7 44 24-77 3-46 (56)
122 2ysj_A Tripartite motif-contai 57.1 3.2 0.00011 27.7 0.9 47 24-74 17-63 (63)
123 1e4u_A Transcriptional repress 57.1 8.6 0.00029 27.3 3.2 50 25-78 9-60 (78)
124 2d8v_A Zinc finger FYVE domain 53.8 5.8 0.0002 27.3 1.6 35 22-77 3-37 (67)
125 3ng2_A RNF4, snurf, ring finge 51.8 1.2 4E-05 30.6 -2.2 51 23-77 6-60 (71)
126 1s24_A Rubredoxin 2; electron 50.3 9.5 0.00033 27.9 2.4 48 23-78 31-78 (87)
127 2a20_A Regulating synaptic mem 49.5 3.7 0.00013 27.6 0.1 53 25-77 7-60 (62)
128 3l11_A E3 ubiquitin-protein li 48.4 9.6 0.00033 28.8 2.4 48 24-77 12-59 (115)
129 1x64_A Alpha-actinin-2 associa 47.9 29 0.001 24.7 4.9 41 15-58 13-53 (89)
130 2ecv_A Tripartite motif-contai 47.9 7.3 0.00025 27.3 1.6 51 24-77 16-68 (85)
131 2ckl_B Ubiquitin ligase protei 47.3 3.4 0.00011 33.7 -0.5 47 26-77 53-99 (165)
132 2ecn_A Ring finger protein 141 46.3 4.8 0.00017 27.4 0.3 46 24-77 12-57 (70)
133 2ea6_A Ring finger protein 4; 46.3 3 0.0001 28.1 -0.8 49 25-77 13-65 (69)
134 2ct2_A Tripartite motif protei 45.6 9.1 0.00031 27.1 1.8 52 25-77 13-65 (88)
135 2kn9_A Rubredoxin; metalloprot 43.5 17 0.0006 26.1 2.9 46 25-78 25-70 (81)
136 2yur_A Retinoblastoma-binding 42.8 9.4 0.00032 26.3 1.4 51 23-77 11-61 (74)
137 3lrq_A E3 ubiquitin-protein li 41.8 3 0.0001 31.0 -1.5 47 26-77 21-67 (100)
138 2h21_A Ribulose-1,5 bisphospha 41.8 11 0.00038 35.8 2.2 25 217-241 31-55 (440)
139 3k3s_A Altronate hydrolase; st 41.7 15 0.00052 27.7 2.5 16 313-328 34-49 (105)
140 1chc_A Equine herpes virus-1 r 40.5 5.3 0.00018 26.9 -0.2 46 26-77 4-49 (68)
141 2k1p_A Zinc finger RAN-binding 40.0 12 0.0004 22.0 1.3 14 65-78 3-16 (33)
142 6rxn_A Rubredoxin; electron tr 37.4 19 0.00065 22.9 2.1 16 62-78 25-40 (46)
143 2ecw_A Tripartite motif-contai 37.2 9.8 0.00033 26.6 0.8 50 25-77 17-68 (85)
144 1yk4_A Rubredoxin, RD; electro 36.9 21 0.00072 23.3 2.3 16 62-78 30-45 (52)
145 2csy_A Zinc finger protein 183 36.0 5 0.00017 28.3 -1.0 48 23-77 11-58 (81)
146 2pk7_A Uncharacterized protein 35.8 17 0.00058 25.2 1.8 27 27-53 8-37 (69)
147 4b2u_A S67; toxin, ICK; NMR {S 35.8 8.3 0.00028 22.1 0.1 13 66-78 16-28 (36)
148 4ayc_A E3 ubiquitin-protein li 35.3 5.6 0.00019 31.4 -0.9 44 27-77 53-96 (138)
149 2js4_A UPF0434 protein BB2007; 35.2 16 0.00055 25.4 1.6 28 27-54 8-38 (70)
150 2hf1_A Tetraacyldisaccharide-1 34.7 17 0.00057 25.2 1.6 27 27-53 8-37 (68)
151 2jny_A Uncharacterized BCR; st 34.5 17 0.00058 25.1 1.6 28 27-54 10-40 (67)
152 4rxn_A Rubredoxin; electron tr 34.5 25 0.00087 23.1 2.4 16 62-78 31-46 (54)
153 1dx8_A Rubredoxin; electron tr 34.4 25 0.00085 24.5 2.5 18 60-78 33-50 (70)
154 2jr6_A UPF0434 protein NMA0874 34.0 17 0.00058 25.2 1.6 28 27-54 8-38 (68)
155 1zbd_B Rabphilin-3A; G protein 33.7 17 0.00057 28.8 1.7 53 25-77 53-107 (134)
156 2v3b_B Rubredoxin 2, rubredoxi 32.9 25 0.00087 23.1 2.2 16 62-78 31-46 (55)
157 3fl2_A E3 ubiquitin-protein li 32.1 4.7 0.00016 31.1 -1.9 47 26-78 51-97 (124)
158 1v5n_A PDI-like hypothetical p 31.5 16 0.00055 26.6 1.2 33 27-60 47-79 (89)
159 2co8_A NEDD9 interacting prote 30.7 51 0.0017 23.0 3.8 31 26-58 14-44 (82)
160 1n3j_A A612L, histone H3 lysin 30.7 21 0.00071 27.2 1.7 20 310-330 15-34 (119)
161 2lk0_A RNA-binding protein 5; 30.3 13 0.00044 21.6 0.4 12 66-77 3-14 (32)
162 1jm7_A BRCA1, breast cancer ty 30.3 9.9 0.00034 28.3 -0.2 47 27-77 21-67 (112)
163 2djb_A Polycomb group ring fin 29.5 15 0.0005 25.1 0.6 48 24-77 12-59 (72)
164 2zet_C Melanophilin; complex, 28.8 29 0.00099 28.0 2.4 50 25-77 66-117 (153)
165 1t1h_A Gspef-atpub14, armadill 27.7 12 0.00042 25.8 -0.1 47 25-77 6-52 (78)
166 2xeu_A Ring finger protein 4; 26.6 2.9 9.9E-05 27.8 -3.5 47 27-77 3-53 (64)
167 2ckl_A Polycomb group ring fin 26.3 17 0.00057 27.1 0.4 47 25-77 13-59 (108)
168 2y43_A E3 ubiquitin-protein li 25.2 8.5 0.00029 28.2 -1.4 47 25-77 20-66 (99)
169 1jm7_B BARD1, BRCA1-associated 24.9 47 0.0016 24.9 2.9 44 26-77 21-64 (117)
170 1faq_A RAF-1; transferase, ser 24.1 43 0.0015 21.2 2.1 31 26-58 13-43 (52)
171 3ztg_A E3 ubiquitin-protein li 23.8 13 0.00045 26.6 -0.6 49 25-77 11-59 (92)
172 1weo_A Cellulose synthase, cat 22.4 13 0.00046 27.1 -0.7 52 24-78 13-68 (93)
173 1pft_A TFIIB, PFTFIIBN; N-term 22.4 46 0.0016 21.0 2.0 26 28-53 6-35 (50)
174 3g8r_A Probable spore coat pol 22.3 28 0.00095 32.2 1.2 18 311-328 280-297 (350)
175 3k3s_A Altronate hydrolase; st 22.2 44 0.0015 25.2 2.1 17 222-238 64-80 (105)
176 3f9x_A Histone-lysine N-methyl 22.1 50 0.0017 26.5 2.6 28 296-326 30-57 (166)
177 4ap4_A E3 ubiquitin ligase RNF 21.2 12 0.00041 28.6 -1.3 48 26-77 6-57 (133)
178 2e61_A Zinc finger CW-type PWW 20.9 61 0.0021 22.4 2.5 32 40-73 16-49 (69)
179 1zfo_A LAsp-1; LIM domain, zin 20.8 38 0.0013 19.2 1.2 28 28-57 4-31 (31)
180 3laz_A D-galactarate dehydrata 20.2 51 0.0018 24.5 2.1 20 222-242 57-76 (99)
No 1
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=263.89 Aligned_cols=190 Identities=25% Similarity=0.365 Sum_probs=151.4
Q ss_pred cccccCCC--CCCCChHHHhhhhhhhhhhhhcCCCccCCCccccCCCCcccccchhhccCCceecChHHHHHHHHhhHH-
Q 019353 125 KRRKLLPF--NPTEDPERRLQQMASLATALRASGTEFTDELTYVTGMAPRSANSAVLEKGGMQVLSKEDIETLNLCKHM- 201 (342)
Q Consensus 125 ~~~k~~p~--~~~~~~~~r~k~~~s~~sal~~~~~~~s~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~- 201 (342)
..++++|| ++...+..+.+......+....++++.+++..+ +....|+|+++..+|+...++.. ..|+|+
T Consensus 13 ~~~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~~C--~~~~~C~nr~~~~EC~~~~C~c~-----~~C~Nr~ 85 (232)
T 3ooi_A 13 NDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPC--GIDSECINRMLLYECHPTVCPAG-----GRCQNQC 85 (232)
T ss_dssp HCCSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSSTT--CTTSCCHHHHTTBCCCTTTCTTG-----GGCCCCH
T ss_pred cCCCCCCceEeeccccccccccccCCcccCCcccccCCCCCCC--CCCCCCcCcCceeEeCCCCCCCC-----CCcCCcc
Confidence 34556666 344443333333333456678899988877666 66679999999999988777766 578765
Q ss_pred hhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccc---c-----ccCCCCceeeeecccCCCCcEEEeCC
Q 019353 202 MNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNN---R-----ENDDGDSTMTLLHASNPAQSLVVCPY 273 (342)
Q Consensus 202 ~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~iDa~ 273 (342)
+|++..++++|+.++.+||||||+++|++|++|+||+|||+.... + .......|+..+ + ..++|||+
T Consensus 86 ~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l---~--~~~~IDa~ 160 (232)
T 3ooi_A 86 FSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTL---D--KDRIIDAG 160 (232)
T ss_dssp HHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEE---E--TTEEEEEE
T ss_pred ccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeec---C--cceEEecc
Confidence 999999999999999999999999999999999999999976421 1 112233444333 2 57899999
Q ss_pred CCCCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 274 KHGNIARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 274 ~~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
.+||+||||| |||. |||.++.|.+++..+|+|||+|||++||||||||+++++
T Consensus 161 ~~Gn~aRfiN----HSC~----PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~ 213 (232)
T 3ooi_A 161 PKGNYARFMN----HCCQ----PNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECL 213 (232)
T ss_dssp EEECGGGGCE----ECSS----CSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCST
T ss_pred cccccccccc----ccCC----CCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcC
Confidence 9999999999 9999 999999999999999999999999999999999998664
No 2
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=239.61 Aligned_cols=164 Identities=26% Similarity=0.392 Sum_probs=130.6
Q ss_pred hcCCCccCCCccccCCCCcccccchhhccCCceecChHHHHHHHHhhHH-hhcCCCC-ccEEeecCCCceeEEEccCCCC
Q 019353 153 RASGTEFTDELTYVTGMAPRSANSAVLEKGGMQVLSKEDIETLNLCKHM-MNRGEWP-PLMVEYDPKEGFTVQADRFIKD 230 (342)
Q Consensus 153 ~~~~~~~s~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~v~~~~~~G~Gv~a~~~i~~ 230 (342)
..+++...++.. -.+....|+|+++..+|+...+... ..|.++ +|++.+. +++|+.++.+||||||+++|++
T Consensus 23 ~~C~C~~~~~~~-~~~c~~~C~nr~~~~EC~~~~C~C~-----~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~ 96 (222)
T 3ope_A 23 TTCNCKKPDDDT-RKGCVDDCLNRMIFAECSPNTCPCG-----EQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKA 96 (222)
T ss_dssp CCCCCCCCSCSS-SCSSCSCCTTGGGTBCCCTTTCTTT-----TSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCT
T ss_pred ccccCcCCCcCC-CCCCcccCcCcCeEeEeCCCCCcCC-----CCCCCceEeCCCccccEEEEEcCCCceEEEECceECC
Confidence 456665433211 1245679999999999988777765 567665 8888765 4999999999999999999999
Q ss_pred CCeEEEccceeecccc---cc----cCCCCceeeeecccCCCCcEEEeCCCCCCeeeeccCCCCCCCCCCCCCCcEEEEE
Q 019353 231 LTIITEYVGDVDYLNN---RE----NDDGDSTMTLLHASNPAQSLVVCPYKHGNIARFVNGINNHTADGKKKQNLKCVRY 303 (342)
Q Consensus 231 g~~I~ey~Gev~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~iDa~~~GN~aRfin~~~~hSC~~~~~pN~~~~~~ 303 (342)
|++|+||.|||+.... +. ....+.|++.+ +..++|||+.+||+||||| |||. |||.++.|
T Consensus 97 G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~y~~~l-----~~~~~IDa~~~Gn~aRfiN----HSC~----PN~~~~~~ 163 (222)
T 3ope_A 97 GQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLNL-----DSGMVIDSYRMGNEARFIN----HSCD----PNCEMQKW 163 (222)
T ss_dssp TCEEEECCSEEECHHHHHHHHHHTSTTCCSCCEEEE-----ETTEEEECSSEECGGGGCE----ECSS----CSEEEEEE
T ss_pred CCEEEEecceecCHHHHHHHHHHHhcccCCeEEEec-----CCCEEEeCccccccceeec----cCCC----CCeEeEEE
Confidence 9999999999986422 11 11223333322 2578999999999999999 9999 99999999
Q ss_pred EECCeEEEEEEEcCCCCCCCeEEEecCCCCCC
Q 019353 304 NVNGECRVLLVANRDIAKGERLYYDYNGYEKE 335 (342)
Q Consensus 304 ~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~~ 335 (342)
.+++..+|+|||+|||++||||||||+++++.
T Consensus 164 ~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~ 195 (222)
T 3ope_A 164 SVNGVYRIGLYALKDMPAGTELTYDYNFHSFN 195 (222)
T ss_dssp EETTEEEEEEEESSCBCTTCBCEECTTSSBCC
T ss_pred EECCeEEEEEEECCccCCCCEEEEECCCcccC
Confidence 99999999999999999999999999987654
No 3
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=99.97 E-value=2.4e-31 Score=244.32 Aligned_cols=147 Identities=20% Similarity=0.340 Sum_probs=123.5
Q ss_pred CCcccccchhhccCCceecChHHHHHHHHhhHH-hhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccc-
Q 019353 169 MAPRSANSAVLEKGGMQVLSKEDIETLNLCKHM-MNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNN- 246 (342)
Q Consensus 169 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~- 246 (342)
....|.|+++..+|+. .|... ..|+|+ +|++..++++|+.++.+||||||+++|++|++|+||.|||+....
T Consensus 83 C~~~C~nr~~~~EC~~-~C~C~-----~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~ 156 (278)
T 3h6l_A 83 CGEDCLNRLLMIECSS-RCPNG-----DYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEF 156 (278)
T ss_dssp SCTTCTTGGGTBCCCT-TCTTG-----GGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHH
T ss_pred CCCCCCCcceEeccCC-CCCcC-----CCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHH
Confidence 3457999999999974 56654 577765 999999999999999999999999999999999999999986422
Q ss_pred --cc----c-CCCCceeeeecccCCCCcEEEeCCCCCCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCC
Q 019353 247 --RE----N-DDGDSTMTLLHASNPAQSLVVCPYKHGNIARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDI 319 (342)
Q Consensus 247 --~~----~-~~~~~~~~~~~~~~~~~~~~iDa~~~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI 319 (342)
+. . ....+|+..+ + ...+|||+.+||+||||| |||. |||+++.|.+++..+|+|||+|||
T Consensus 157 ~~R~~~y~~~~~~~~y~~~l---~--~~~~IDa~~~GN~aRFiN----HSC~----PN~~~~~~~v~g~~ri~~fA~RdI 223 (278)
T 3h6l_A 157 KARVKEYARNKNIHYYFMAL---K--NDEIIDATQKGNCSRFMN----HSCE----PNCETQKWTVNGQLRVGFFTTKLV 223 (278)
T ss_dssp HHHHHHHHHTTCCCCCEEEE---E--TTEEEECSSEECGGGGCE----ECSS----CSEEEEEEEETTEEEEEEEESSCB
T ss_pred HHHHHHHHhccCccceeecc---c--CCeEEeCcccCChhhhcc----cCCC----CCceeEEEEeCCceEEEEEECCcc
Confidence 11 1 1223333332 2 478999999999999999 9999 999999999999999999999999
Q ss_pred CCCCeEEEecCCCCC
Q 019353 320 AKGERLYYDYNGYEK 334 (342)
Q Consensus 320 ~~GEELt~dY~~~~~ 334 (342)
++||||||||+++++
T Consensus 224 ~~GEELT~dY~~~~~ 238 (278)
T 3h6l_A 224 PSGSELTFDYQFQRY 238 (278)
T ss_dssp CTTCBCEECCTTTEE
T ss_pred CCCCEEEEecCCCcC
Confidence 999999999998654
No 4
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.97 E-value=9.8e-31 Score=223.79 Aligned_cols=133 Identities=23% Similarity=0.351 Sum_probs=111.0
Q ss_pred HHHHHHhhHHhhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccc---cc--c---CCCCceeeeecccC
Q 019353 192 IETLNLCKHMMNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNN---RE--N---DDGDSTMTLLHASN 263 (342)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~---~~--~---~~~~~~~~~~~~~~ 263 (342)
.+..+...+.++++...+++|+.++++||||||+++|++|++|+||.|+++.... +. + .....|+.++...
T Consensus 14 ~e~~~~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~- 92 (166)
T 3f9x_A 14 SEERKRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYL- 92 (166)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEET-
T ss_pred HHHHHHHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecC-
Confidence 3445667788999999999999999999999999999999999999999975321 11 1 1223344433322
Q ss_pred CCCcEEEeCCCC-CCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 264 PAQSLVVCPYKH-GNIARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 264 ~~~~~~iDa~~~-GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
+..++|||+.. ||+||||| |||. |||.+..+.+++..+|+|||+|||++||||||||++++.
T Consensus 93 -~~~~~iDa~~~~Gn~aRfiN----HSC~----PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 93 -SKTYCVDATRETNRLGRLIN----HSKC----GNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp -TEEEEEECCSCCSCSGGGCE----ECTT----CSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred -CCCeEEechhcCCChhheee----cCCC----CCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 36899999996 99999999 9999 999999999999999999999999999999999998764
No 5
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=99.96 E-value=1e-29 Score=234.88 Aligned_cols=130 Identities=25% Similarity=0.317 Sum_probs=107.1
Q ss_pred HHhhHH-hhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccccccCCCCceeeeecccCCCCcEEEeCCC
Q 019353 196 NLCKHM-MNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASNPAQSLVVCPYK 274 (342)
Q Consensus 196 ~~~~~~-~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~ 274 (342)
..|+|+ +|++...+++|+.++.+||||||+++|++|++|+||.|||+..........+.|++.+...+ ...++|||+.
T Consensus 134 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~~~Y~f~l~~~~-~~~~~IDa~~ 212 (287)
T 3hna_A 134 RNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREEDSYLFDLDNKD-GEVYCIDARF 212 (287)
T ss_dssp TTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSCCTTEEESCCSS-SSCEEEEEEE
T ss_pred CCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhcccceEEEeccCC-CceEEEeccc
Confidence 356654 89999999999999999999999999999999999999998754433333444544443222 2468999999
Q ss_pred CCCeeeeccCCCCCCCCCCCCCCcEEEEEEECC----eEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 275 HGNIARFVNGINNHTADGKKKQNLKCVRYNVNG----ECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 275 ~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~----~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
+||+||||| |||. ||+.++.+.+.+ ..+|+|||+|||++||||||||+..++
T Consensus 213 ~GN~aRFiN----HSC~----PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~ 268 (287)
T 3hna_A 213 YGNVSRFIN----HHCE----PNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFW 268 (287)
T ss_dssp EECGGGGCE----ECSS----CSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHH
T ss_pred cCCchheee----ecCC----CCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCccc
Confidence 999999999 9999 999998877654 369999999999999999999996443
No 6
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.95 E-value=1.2e-28 Score=214.79 Aligned_cols=121 Identities=29% Similarity=0.367 Sum_probs=98.4
Q ss_pred hhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccc---cc--c--CCCCceeeeecccCCCCcEEEeCCC
Q 019353 202 MNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNN---RE--N--DDGDSTMTLLHASNPAQSLVVCPYK 274 (342)
Q Consensus 202 ~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~---~~--~--~~~~~~~~~~~~~~~~~~~~iDa~~ 274 (342)
++++...+++|+.++++||||||+++|++|++|+||.|||+.... ++ . .....|++. .+ ..++|||+.
T Consensus 46 l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~---l~--~~~~IDa~~ 120 (192)
T 2w5y_A 46 LKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFR---ID--DSEVVDATM 120 (192)
T ss_dssp HHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEE---CS--SSEEEECTT
T ss_pred HhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeee---ec--CceEEECcc
Confidence 555566789999999999999999999999999999999986432 11 1 111223322 22 478999999
Q ss_pred CCCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCCC
Q 019353 275 HGNIARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEKE 335 (342)
Q Consensus 275 ~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~~ 335 (342)
+||+||||| |||. |||.+..+.++|..+|+|+|+|||++||||||||++.++.
T Consensus 121 ~Gn~arfiN----HSC~----PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~ 173 (192)
T 2w5y_A 121 HGNAARFIN----HSCE----PNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIED 173 (192)
T ss_dssp TCCGGGGCE----ECSS----CSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC----
T ss_pred ccChhHhhc----cCCC----CCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhc
Confidence 999999999 9999 9999999999999999999999999999999999986543
No 7
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=99.95 E-value=1.5e-28 Score=228.41 Aligned_cols=130 Identities=28% Similarity=0.390 Sum_probs=105.4
Q ss_pred HhhHH-hhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccc---cc--c-CCCCceeeeecccCCCCcEE
Q 019353 197 LCKHM-MNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNN---RE--N-DDGDSTMTLLHASNPAQSLV 269 (342)
Q Consensus 197 ~~~~~-~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~---~~--~-~~~~~~~~~~~~~~~~~~~~ 269 (342)
.|+|+ +|++...+++|++++.+||||||+++|++|++|+||+|||+.... +. + .....|++.+........++
T Consensus 125 ~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~~~ 204 (299)
T 1mvh_A 125 ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYT 204 (299)
T ss_dssp TCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCEE
T ss_pred CcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCCCCccEE
Confidence 56554 899999999999999999999999999999999999999986421 21 1 12233443333222235799
Q ss_pred EeCCCCCCeeeeccCCCCCCCCCCCCCCcEEEEEEEC----CeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 270 VCPYKHGNIARFVNGINNHTADGKKKQNLKCVRYNVN----GECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 270 iDa~~~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~----~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
|||+.+||+||||| |||+ |||.+..+.++ +..+|+|||+|||++||||||||++.++
T Consensus 205 IDa~~~GN~aRfiN----HSC~----PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 205 VDAQNYGDVSRFFN----HSCS----PNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp EECSSEECGGGGCE----ECSS----CSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred EeCcccCChhheEe----ecCC----CCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 99999999999999 9999 99998877765 3579999999999999999999998765
No 8
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=227.30 Aligned_cols=132 Identities=26% Similarity=0.414 Sum_probs=106.3
Q ss_pred HHhhHH-hhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeeccc---cccc----CCCCceeeeeccc--CCC
Q 019353 196 NLCKHM-MNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLN---NREN----DDGDSTMTLLHAS--NPA 265 (342)
Q Consensus 196 ~~~~~~-~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~---~~~~----~~~~~~~~~~~~~--~~~ 265 (342)
..|+|+ +|++...+|+|+.++.+||||||+++|++|++|+||+|||+... .+.. ....|++.+.... ...
T Consensus 113 ~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~~~~~~ 192 (290)
T 3bo5_A 113 DHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQV 192 (290)
T ss_dssp TTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC-----
T ss_pred CCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccccCCcc
Confidence 356654 89999999999999999999999999999999999999998642 2211 1233444332211 112
Q ss_pred CcEEEeCCCCCCeeeeccCCCCCCCCCCCCCCcEEEEEEECC-eEEEEEEEcCCCCCCCeEEEecCCCCCC
Q 019353 266 QSLVVCPYKHGNIARFVNGINNHTADGKKKQNLKCVRYNVNG-ECRVLLVANRDIAKGERLYYDYNGYEKE 335 (342)
Q Consensus 266 ~~~~iDa~~~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~-~~~i~l~A~rdI~~GEELt~dY~~~~~~ 335 (342)
..++|||+.+||+||||| |||+ |||.++.|.+++ ..+|+|||+|||++||||||||++.++.
T Consensus 193 ~~~~IDa~~~GN~arfiN----HSC~----PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~ 255 (290)
T 3bo5_A 193 METFVDPTYIGNIGRFLN----HSCE----PNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLN 255 (290)
T ss_dssp EEEEEEEEEEECGGGGCE----ECSS----CSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTC
T ss_pred ceeEEeeeecCCchheee----ecCC----CCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccc
Confidence 368999999999999999 9999 999999888886 5899999999999999999999976654
No 9
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=99.94 E-value=7.2e-28 Score=224.63 Aligned_cols=131 Identities=26% Similarity=0.351 Sum_probs=100.4
Q ss_pred HhhH-HhhcCCCCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccc---ccc-----CCCCceeeeecc-cCC--
Q 019353 197 LCKH-MMNRGEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNN---REN-----DDGDSTMTLLHA-SNP-- 264 (342)
Q Consensus 197 ~~~~-~~~~~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~---~~~-----~~~~~~~~~~~~-~~~-- 264 (342)
.|+| ++|++...+|+|++++.+||||||+++|++|++|+||+|||+.... +.. ...+.|++.+.. .++
T Consensus 121 ~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~~ 200 (302)
T 1ml9_A 121 DCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPDS 200 (302)
T ss_dssp TCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSS
T ss_pred CCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCccc
Confidence 4544 4888999999999999999999999999999999999999986422 111 122334433322 111
Q ss_pred ------CCcEEEeCCCCCCeeeeccCCCCCCCCCCCCCCcEEEEEEEC----CeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 265 ------AQSLVVCPYKHGNIARFVNGINNHTADGKKKQNLKCVRYNVN----GECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 265 ------~~~~~iDa~~~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~----~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
...++|||+.+||+||||| |||+ |||.+..+..+ +..+|+|||+|||++||||||||++.++
T Consensus 201 ~d~~~~~~~~~IDa~~~GN~arfiN----HSC~----PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~ 272 (302)
T 1ml9_A 201 LDPLLAGQPLEVDGEYMSGPTRFIN----HSCD----PNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLT 272 (302)
T ss_dssp SCHHHHSCCCEEECSSEECGGGGCE----ECSS----CSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC---
T ss_pred ccccccCCcEEEeCcccCCHHHhcc----cCCC----CCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCcc
Confidence 1468999999999999999 9999 99988765433 2369999999999999999999997654
Q ss_pred C
Q 019353 335 E 335 (342)
Q Consensus 335 ~ 335 (342)
.
T Consensus 273 ~ 273 (302)
T 1ml9_A 273 G 273 (302)
T ss_dssp -
T ss_pred c
Confidence 3
No 10
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=222.20 Aligned_cols=127 Identities=28% Similarity=0.415 Sum_probs=102.3
Q ss_pred HHhhHH-hhcCCCCccEEeecC-CCceeEEEccCCCCCCeEEEccceeecccc---cc--cC-CCCceeeeecccCCCCc
Q 019353 196 NLCKHM-MNRGEWPPLMVEYDP-KEGFTVQADRFIKDLTIITEYVGDVDYLNN---RE--ND-DGDSTMTLLHASNPAQS 267 (342)
Q Consensus 196 ~~~~~~-~~~~~~~~~~v~~~~-~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~---~~--~~-~~~~~~~~~~~~~~~~~ 267 (342)
..|+|+ +|++...+++|+++. .+||||||+++|++|++|+||+|||+.... +. ++ ....|++.+.. ....
T Consensus 127 ~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~--~~~~ 204 (300)
T 2r3a_A 127 PDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDY--ESDE 204 (300)
T ss_dssp TTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCS--SCSS
T ss_pred CcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeec--CCce
Confidence 356665 899999999999986 699999999999999999999999986422 11 11 11223322211 1257
Q ss_pred EEEeCCCCCCeeeeccCCCCCCCCCCCCCCcEEEEEEECC----eEEEEEEEcCCCCCCCeEEEecCCC
Q 019353 268 LVVCPYKHGNIARFVNGINNHTADGKKKQNLKCVRYNVNG----ECRVLLVANRDIAKGERLYYDYNGY 332 (342)
Q Consensus 268 ~~iDa~~~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~----~~~i~l~A~rdI~~GEELt~dY~~~ 332 (342)
++|||+.+||+||||| |||+ |||.+..|.+++ ..+|+|||+|||++||||||||++.
T Consensus 205 ~~IDa~~~GN~aRfiN----HSC~----PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~ 265 (300)
T 2r3a_A 205 FTVDAARYGNVSHFVN----HSCD----PNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMK 265 (300)
T ss_dssp EEEECSSEECGGGGCE----ECSS----CSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGS
T ss_pred EEEecccccChHHhee----cCCC----CCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCC
Confidence 8999999999999999 9999 999998888763 5799999999999999999999975
No 11
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.93 E-value=4.4e-26 Score=190.57 Aligned_cols=119 Identities=22% Similarity=0.192 Sum_probs=93.6
Q ss_pred HHhhcCCCCccEEeecCC--CceeEEEccCCCCCCeEEEccceeecccccccCCCCceeeeecccCCCCcEEEeCCC--C
Q 019353 200 HMMNRGEWPPLMVEYDPK--EGFTVQADRFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASNPAQSLVVCPYK--H 275 (342)
Q Consensus 200 ~~~~~~~~~~~~v~~~~~--~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~--~ 275 (342)
+....+....|.|+.+.. +||||||+++|++|++|+||.||++...... ...|++.++..+ ...++|||+. .
T Consensus 21 ~~~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~---~~~Y~f~i~~~~-~~~~~IDa~~~~~ 96 (149)
T 2qpw_A 21 EHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK---NNVYMWEVYYPN-LGWMCIDATDPEK 96 (149)
T ss_dssp HHHHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC---CSSSEEEEEETT-TEEEEEECSSGGG
T ss_pred HHHHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc---cCceEEEEecCC-CeeEEEeCCCCCC
Confidence 344556677899999874 6999999999999999999999998643322 234444433222 2457899998 9
Q ss_pred CCeeeeccCCCCCCCCCCCCC---CcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 276 GNIARFVNGINNHTADGKKKQ---NLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 276 GN~aRfin~~~~hSC~~~~~p---N~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
||++|||| |||. | ||.+. ..+ .+|+|+|+|||++||||||||+..++
T Consensus 97 gn~~RfIN----hSc~----p~eqNl~~~--~~~--~~I~~~A~RdI~~GEEL~~dY~~~~~ 146 (149)
T 2qpw_A 97 GNWLRYVN----WACS----GEEQNLFPL--EIN--RAIYYKTLKPIAPGEELLVWYNGEDN 146 (149)
T ss_dssp SCGGGGCE----ECBT----TBTCCEEEE--EET--TEEEEEESSCBCTTCBCEECCCCCCC
T ss_pred Ccceeeee----ccCC----hhhcCEEEE--EEC--CEEEEEEccCCCCCCEEEEccCCccC
Confidence 99999999 9999 9 99763 233 58999999999999999999997654
No 12
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.91 E-value=1.1e-25 Score=181.88 Aligned_cols=110 Identities=17% Similarity=0.149 Sum_probs=90.1
Q ss_pred CCccEEeecCCCceeEEEccCCCCCCeEEEccceeecccccccCCCCceeeeecccCCCCcEEEeCCCCCCeeeeccCCC
Q 019353 207 WPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASNPAQSLVVCPYKHGNIARFVNGIN 286 (342)
Q Consensus 207 ~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~GN~aRfin~~~ 286 (342)
.++++|+.++++||||||+++|++|++|+||.|+++..........++.+.+ + . |+...||++||+|
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~~~~y~f~~----~--~----d~~~~~~~~~~~N--- 69 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALEDYLFSR----K--N----MSAMALGFGAIFN--- 69 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHHSCSEEEEE----T--T----EEEEESSSHHHHH---
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhccCCeEEEe----C--C----ccccccCceeeec---
Confidence 4689999999999999999999999999999999987544333222333222 2 1 8889999999999
Q ss_pred CCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCCCC
Q 019353 287 NHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEKEY 336 (342)
Q Consensus 287 ~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~~~ 336 (342)
|||+ |||.+.. ..+..++.++|+|||++|||||+||+..++.-
T Consensus 70 -Hsc~----pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 70 -HSKD----PNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp -SCSS----CCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred -cCCC----CCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 9999 9997764 35677999999999999999999999876554
No 13
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.90 E-value=4.2e-24 Score=194.60 Aligned_cols=112 Identities=13% Similarity=0.015 Sum_probs=88.0
Q ss_pred ccEEeecCCC--ceeEEEccCCCCCCeEEEccceeeccc---ccccCCCCceeeeecccCCCCcEEEeCC--------CC
Q 019353 209 PLMVEYDPKE--GFTVQADRFIKDLTIITEYVGDVDYLN---NRENDDGDSTMTLLHASNPAQSLVVCPY--------KH 275 (342)
Q Consensus 209 ~~~v~~~~~~--G~Gv~a~~~i~~g~~I~ey~Gev~~~~---~~~~~~~~~~~~~~~~~~~~~~~~iDa~--------~~ 275 (342)
.++|..+..+ ||||||+++|++|++|+||.||++... .+......+ ++ ..+ ...+|||. ..
T Consensus 110 ~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~~~-~f---~l~--~~~~IDa~~~~~~~~~~~ 183 (261)
T 2f69_A 110 RVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGN-TL---SLD--EETVIDVPEPYNHVSKYC 183 (261)
T ss_dssp TEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGCSS-CE---ECS--SSCEEECCTTTTSTTTCC
T ss_pred eEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhccc-ee---eec--CCeEEEcccccccccccc
Confidence 5788888876 999999999999999999999998642 222211222 21 222 57899995 49
Q ss_pred CCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEE-EEEEEcCCCCCCCeEEEecCCCCC
Q 019353 276 GNIARFVNGINNHTADGKKKQNLKCVRYNVNGECR-VLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 276 GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~-i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
||+||||| |||+ |||.+..+...+..+ |+|||+|||++||||||||++...
T Consensus 184 Gn~aRfiN----HSC~----PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 184 ASLGHKAN----HSFT----PNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp SCCGGGCE----ECSS----CSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred ccceeeEe----eCCC----CCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 99999999 9999 999998874444334 499999999999999999997654
No 14
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.89 E-value=4.1e-23 Score=192.03 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=89.0
Q ss_pred CccEEeecCCCc--eeEEEccCCCCCCeEEEccceeeccc---ccccCCCCceeeeecccCCCCcEEEeC--------CC
Q 019353 208 PPLMVEYDPKEG--FTVQADRFIKDLTIITEYVGDVDYLN---NRENDDGDSTMTLLHASNPAQSLVVCP--------YK 274 (342)
Q Consensus 208 ~~~~v~~~~~~G--~Gv~a~~~i~~g~~I~ey~Gev~~~~---~~~~~~~~~~~~~~~~~~~~~~~~iDa--------~~ 274 (342)
+.+.|..++.+| |||||+++|++|++|+||+||++... .+......+.+ .. +...+||| +.
T Consensus 163 ~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~~~~~----~l--~~~~~iDa~~~~~~~~~~ 236 (293)
T 1h3i_A 163 ERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTL----SL--DEETVIDVPEPYNHVSKY 236 (293)
T ss_dssp TTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGCTTEE----EC--SSSCEEECCTTTTSTTTC
T ss_pred eeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcccCEE----ec--CCCEEEeCccccccccee
Confidence 457888888766 99999999999999999999998642 22222222222 22 25789999 77
Q ss_pred CCCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEE-EEEEEcCCCCCCCeEEEecCCCC
Q 019353 275 HGNIARFVNGINNHTADGKKKQNLKCVRYNVNGECR-VLLVANRDIAKGERLYYDYNGYE 333 (342)
Q Consensus 275 ~GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~-i~l~A~rdI~~GEELt~dY~~~~ 333 (342)
.||+||||| |||+ |||.++.+...+..+ ++|+|+|||++||||||||+++.
T Consensus 237 ~gn~ar~iN----Hsc~----pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~ 288 (293)
T 1h3i_A 237 CASLGHKAN----HSFT----PNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDH 288 (293)
T ss_dssp CSCCGGGSE----EESS----CSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTB
T ss_pred eccceeeec----cCCC----CCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCC
Confidence 999999999 9999 999998875555455 48999999999999999999865
No 15
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.84 E-value=7.8e-21 Score=161.57 Aligned_cols=122 Identities=14% Similarity=0.200 Sum_probs=84.0
Q ss_pred CCCccEEeecCC--CceeEEEccCCCCCCeEEEccceeecccccccCCCCceeeeecccCCCCcEEEeCCC--CCCeeee
Q 019353 206 EWPPLMVEYDPK--EGFTVQADRFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASNPAQSLVVCPYK--HGNIARF 281 (342)
Q Consensus 206 ~~~~~~v~~~~~--~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~--~GN~aRf 281 (342)
..+.|+|..+.. .|+||||+++|++|+.+++|.|+++............|+..++..++....+||+.. .||++||
T Consensus 25 LP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~~~~~y~w~i~~~~G~~~~~IDa~~e~~~NWmR~ 104 (170)
T 3ep0_A 25 LPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTY 104 (170)
T ss_dssp CCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC----------CEEEEECTTSSEEEEEECC------GGGG
T ss_pred CCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccccCCceEEEEecCCCcEEEEEECCCCCCcceeee
Confidence 445688998866 589999999999999999999999875433223344555555433433457999998 8999999
Q ss_pred ccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCCCC
Q 019353 282 VNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEKEY 336 (342)
Q Consensus 282 in~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~~~ 336 (342)
|| |+|...+ +|+.... ++ .+|+++|+|||++||||+++|+..+..+
T Consensus 105 Vn----~A~~~~e-qNl~a~q--~~--~~I~~~a~RdI~pGeELlvwYg~~y~~~ 150 (170)
T 3ep0_A 105 IK----CARNEQE-QNLEVVQ--IG--TSIFYKAIEMIPPDQELLVWYGNSHNTF 150 (170)
T ss_dssp CE----ECSSTTT-CCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECC-----
T ss_pred EE----ecCCccc-CCeeeEE--EC--CEEEEEECcCcCCCCEEEEeeCHHHHHH
Confidence 99 9997443 8986543 33 4899999999999999999999866543
No 16
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.82 E-value=2.6e-21 Score=175.65 Aligned_cols=110 Identities=23% Similarity=0.181 Sum_probs=80.3
Q ss_pred CCccEEeec-----CCCceeEEEccCCCCCCeEEEccceeeccccccc------CCCCceeeeecccCCCCcEEEeCCCC
Q 019353 207 WPPLMVEYD-----PKEGFTVQADRFIKDLTIITEYVGDVDYLNNREN------DDGDSTMTLLHASNPAQSLVVCPYKH 275 (342)
Q Consensus 207 ~~~~~v~~~-----~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~------~~~~~~~~~~~~~~~~~~~~iDa~~~ 275 (342)
..+++|..+ ..+||||||+++|++|++|+||.|+|+.....+. ...++..... ....++..+
T Consensus 130 ~~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~~~~~~~dF~i~~s-------~~~~~a~~~ 202 (273)
T 3s8p_A 130 DSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMYS-------TRKNCAQLW 202 (273)
T ss_dssp GGCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHHCCTTTSCTTEEEE-------TTTTEEEEE
T ss_pred CCCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHHhhhcccccceecc-------cccccccee
Confidence 355777554 4599999999999999999999999965422211 1111111111 011246778
Q ss_pred CCeeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 276 GNIARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 276 GN~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
||.||||| |||. |||.+. ..|..++.|+|+|||++|||||+||+..++
T Consensus 203 g~~arfiN----HSC~----PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~ 250 (273)
T 3s8p_A 203 LGPAAFIN----HDCR----PNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFF 250 (273)
T ss_dssp ESGGGGCE----ECSS----CSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTT
T ss_pred cchHHhhC----CCCC----CCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhc
Confidence 99999999 9999 999763 334568999999999999999999997654
No 17
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=149.24 Aligned_cols=120 Identities=14% Similarity=0.137 Sum_probs=82.8
Q ss_pred CCCccEEeec-CCCceeEEEccCCCCCCeEEEccceeeccccccc--CCCCceeeeecccCCCCcEEEeCCC--CCCeee
Q 019353 206 EWPPLMVEYD-PKEGFTVQADRFIKDLTIITEYVGDVDYLNNREN--DDGDSTMTLLHASNPAQSLVVCPYK--HGNIAR 280 (342)
Q Consensus 206 ~~~~~~v~~~-~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~--~~~~~~~~~~~~~~~~~~~~iDa~~--~GN~aR 280 (342)
....|++..+ ++.|+||||++.|++|+.+++|.|+++....... +....|+..++. ++....+||++. .||++|
T Consensus 21 lP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~~~~~y~w~i~~-~~~~~~~iD~~~~~~~NWmR 99 (151)
T 3db5_A 21 LPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYH-NGVLEFCIITTDENECNWMM 99 (151)
T ss_dssp CCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-----------CCSEEEEEE-TTEEEEEEECCCTTTSCGGG
T ss_pred CCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccccCCCceEEEEe-CCCEEEEEECcCCCCCccee
Confidence 3455788775 3589999999999999999999999986532211 122334433332 322467999997 599999
Q ss_pred eccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCCC
Q 019353 281 FVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEKE 335 (342)
Q Consensus 281 fin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~~ 335 (342)
||| |+|...+ +|+.... .+ .+|++.|+|||++||||+++|+..+..
T Consensus 100 ~Vn----~A~~~~e-qNl~a~q--~~--~~I~~~a~rdI~pGeELlv~Yg~~y~~ 145 (151)
T 3db5_A 100 FVR----KARNREE-QNLVAYP--HD--GKIFFCTSQDIPPENELLFYYSRDYAQ 145 (151)
T ss_dssp GCE----ECSSTTT-CCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECC----
T ss_pred EEE----ecCCccc-CceEEEE--EC--CEEEEEEccccCCCCEEEEecCHHHHH
Confidence 999 9997433 7997643 33 478999999999999999999987654
No 18
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.78 E-value=1.6e-19 Score=162.16 Aligned_cols=113 Identities=17% Similarity=0.148 Sum_probs=80.5
Q ss_pred CCCccEEeec-----CCCceeEEEccCCCCCCeEEEccceeeccccccc---CCCCceeeeecccCCCCcEEEeCCCCCC
Q 019353 206 EWPPLMVEYD-----PKEGFTVQADRFIKDLTIITEYVGDVDYLNNREN---DDGDSTMTLLHASNPAQSLVVCPYKHGN 277 (342)
Q Consensus 206 ~~~~~~v~~~-----~~~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~---~~~~~~~~~~~~~~~~~~~~iDa~~~GN 277 (342)
...+++|..+ ..+|+||||+++|++|++|+||.|+++.....+. ......+.+..... .+++..+||
T Consensus 101 ~~~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~~~~~~n~f~i~~~~~-----~~~~~l~~~ 175 (247)
T 3rq4_A 101 PESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYSTR-----KRSAQLWLG 175 (247)
T ss_dssp GGGCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGGCCTTTSCTTEEEETT-----TTEEEEEES
T ss_pred CCCCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHhhhccCCcEEEEecCC-----cccceeecc
Confidence 3455777553 4699999999999999999999999974322211 11111111111111 136677899
Q ss_pred eeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCCC
Q 019353 278 IARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYEK 334 (342)
Q Consensus 278 ~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~~ 334 (342)
.||||| |||. |||.+..+ +..++.|+|+|||++|||||++|+..++
T Consensus 176 ~ar~iN----HSC~----PN~~~~~~---~~~~i~v~A~rdI~~GEElt~~Y~~~~~ 221 (247)
T 3rq4_A 176 PAAFIN----HDCK----PNCKFVPA---DGNAACVKVLRDIEPGDEVTCFYGEGFF 221 (247)
T ss_dssp GGGGCE----ECSS----CSEEEEEE---TTTEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred hhhhcC----CCCC----CCEEEEEe---CCCEEEEEECCcCCCCCEEEEecCchhc
Confidence 999999 9999 99976433 3358999999999999999999997654
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.77 E-value=6.5e-19 Score=152.71 Aligned_cols=119 Identities=15% Similarity=0.169 Sum_probs=89.7
Q ss_pred CCCCccEEeecCC--CceeEEEccCCCCCCeEEEccceeecccccccCCCCceeeeecccCCCCcEEEeCCC--CCCeee
Q 019353 205 GEWPPLMVEYDPK--EGFTVQADRFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASNPAQSLVVCPYK--HGNIAR 280 (342)
Q Consensus 205 ~~~~~~~v~~~~~--~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~--~GN~aR 280 (342)
.....|+|+.+.+ .|+||||+++|++|+.+++|.|+++..+....+....|+..++ .++....+|||.. .||++|
T Consensus 55 SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~~~~~y~w~i~-~~g~~~~~IDas~e~~gNWmR 133 (196)
T 3dal_A 55 SLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIY-SRGELHHFIDGFNEEKSNWMR 133 (196)
T ss_dssp TCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC---CCTTEEEEE-ETTEEEEEEECCCTTSSCGGG
T ss_pred cCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhccCCcceeeec-cCCCEEEEEECCCCCCCceEE
Confidence 3445688888866 8999999999999999999999998764433333334444333 2222468999987 899999
Q ss_pred eccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCC
Q 019353 281 FVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYE 333 (342)
Q Consensus 281 fin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~ 333 (342)
||| |+|...+ +|+.... ++ .+|+++|+|||++||||+++|+.+|
T Consensus 134 fVn----~A~~~~e-qNl~a~q--~~--~~I~y~a~RdI~pGeELlvwYg~~Y 177 (196)
T 3dal_A 134 YVN----PAHSPRE-QNLAACQ--NG--MNIYFYTIKPIPANQELLVWYCRDF 177 (196)
T ss_dssp GCE----ECSSTTT-CCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECHHH
T ss_pred eEE----ecCCccc-CCcEEEE--EC--CEEEEEECcccCCCCEEEEecCHHH
Confidence 999 9997433 8986643 33 5789999999999999999999543
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=135.15 Aligned_cols=114 Identities=21% Similarity=0.169 Sum_probs=86.8
Q ss_pred CCCccEEeecCCCceeEEEc-cCCCCCCeEEEccceeecccccccCCCCceeeeecccCCCCcEEEeCCC--CCCeeeec
Q 019353 206 EWPPLMVEYDPKEGFTVQAD-RFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASNPAQSLVVCPYK--HGNIARFV 282 (342)
Q Consensus 206 ~~~~~~v~~~~~~G~Gv~a~-~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~--~GN~aRfi 282 (342)
....|+|..+...|.||++. +.|++|+.+++|.|+++..... ...|+..++..+ ....+||+.. .||++|||
T Consensus 70 LP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea----~~~y~wei~~~~-g~~~~IDgsde~~gNWmRfV 144 (237)
T 3ray_A 70 IPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKS----AGFFSWLIVDKN-NRYKSIDGSDETKANWMRYV 144 (237)
T ss_dssp CCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC---------CCEEEEECTT-SCEEEEECCCTTTSCGGGGC
T ss_pred CCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHc----cccceEEEEcCC-CcEEEEecCCCCCCcceeEE
Confidence 34458999999999999987 7999999999999999864321 133444443333 2457999997 79999999
Q ss_pred cCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCC
Q 019353 283 NGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYE 333 (342)
Q Consensus 283 n~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~ 333 (342)
| |+|...+ +|+.+.. .+ .+|++.|+|||++||||+++|+..+
T Consensus 145 n----~Ar~~~E-qNL~A~q--~~--~~Iyy~a~RdI~pGeELlVwYg~~Y 186 (237)
T 3ray_A 145 V----ISREERE-QNLLAFQ--HS--ERIYFRACRDIRPGEWLRVWYSEDY 186 (237)
T ss_dssp E----ECCCTTT-CCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECHHH
T ss_pred E----cCCCccc-ccceeEE--eC--CEEEEEEccccCCCCEEEEeeCHHH
Confidence 9 9997443 8986643 33 4789999999999999999999654
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.57 E-value=1.8e-15 Score=126.50 Aligned_cols=104 Identities=14% Similarity=-0.017 Sum_probs=75.5
Q ss_pred CceeEEEccCCCCCCeEEEccceeecccccccCCCCceeeeecccC-------CCCcEEEeCCC--CCCeeeeccCCCCC
Q 019353 218 EGFTVQADRFIKDLTIITEYVGDVDYLNNRENDDGDSTMTLLHASN-------PAQSLVVCPYK--HGNIARFVNGINNH 288 (342)
Q Consensus 218 ~G~Gv~a~~~i~~g~~I~ey~Gev~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~iDa~~--~GN~aRfin~~~~h 288 (342)
.|+||||++.|++|+.+++|.|+++...... ..+++...+..+ .+...+||++. .||++|||| |
T Consensus 30 ~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~---~~~~~~~v~~~d~~~~~~~~~~~~~iD~~~~~~~NWmr~vn----~ 102 (152)
T 3ihx_A 30 FLGGVFSKRRIPKRTQFGPVEGPLVRGSELK---DCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVR----P 102 (152)
T ss_dssp TTCSEEESSCBCSSCEECCCCSCEECSTTCC---SSSCCCBC---------------CEECCCCTTTSCGGGGCC----B
T ss_pred cCCeEEECceecCCCEEEeeccEEcCHHHhc---cCcceEEEEccccccccccCCccEEEEccCCCCCcceeeee----c
Confidence 5799999999999999999999998654321 122222222111 12367999987 599999999 9
Q ss_pred CCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCC
Q 019353 289 TADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYE 333 (342)
Q Consensus 289 SC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~ 333 (342)
+|...+ +|+.... . ..+|++.|+|||++||||+++|+..+
T Consensus 103 a~~~~e-qNl~a~q--~--~~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 103 AQNHLE-QNLVAYQ--Y--GHHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp CCSTTT-CCEEEEE--C--SSSEEEEESSCBCTTCBCCEEECHHH
T ss_pred cCCccC-CCcEEEE--e--CCeEEEEEeeecCCCCEEEEechHHH
Confidence 998543 7997642 2 35788999999999999999998644
No 22
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.38 E-value=3.3e-13 Score=95.09 Aligned_cols=52 Identities=40% Similarity=1.066 Sum_probs=47.8
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
++.+...|.+|+.+ |.||+||.|+++||+.|+.|++..+|.++|+|+.|..+
T Consensus 5 ~d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 5 SDHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 45678889999976 89999999999999999999999999999999999875
No 23
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.38 E-value=2.1e-13 Score=97.77 Aligned_cols=53 Identities=40% Similarity=1.017 Sum_probs=48.3
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCCC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHKR 79 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~~ 79 (342)
+.++..|.+|+.+ |.||+||.|+.+||+.|++|++..+|.++|+|+.|..++.
T Consensus 5 ~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 5 QKNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CSCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 4577889999987 8999999999999999999999999999999999988653
No 24
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.38 E-value=1.6e-13 Score=93.23 Aligned_cols=49 Identities=53% Similarity=1.265 Sum_probs=45.8
Q ss_pred ccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 29 RCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 29 ~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.|.+|+..++.+.||.||.|++|||+.|+.|++..+|+++|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 5999999888889999999999999999999999999999999999763
No 25
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.37 E-value=8.4e-13 Score=98.97 Aligned_cols=58 Identities=31% Similarity=0.747 Sum_probs=51.7
Q ss_pred CCCCCCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 18 ITYESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 18 ~~~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
......+++...|.+|+.+ |.+++||.|+++||+.|+.|++..+|+++|+|+.|....
T Consensus 16 ~~~~~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 16 DEFGTLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CCCCSSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred ccccccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 4445567788899999988 789999999999999999999999999999999998754
No 26
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=2.7e-13 Score=103.53 Aligned_cols=60 Identities=40% Similarity=0.899 Sum_probs=53.8
Q ss_pred CCCCCCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 18 ITYESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 18 ~~~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
....++..+...|.+|+..++.+.||+||.|+.+||+.|++||+..+|.++|+|+.|...
T Consensus 7 ~~s~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 7 GHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCchhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 344557777889999999977789999999999999999999999999999999999875
No 27
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.35 E-value=2.9e-13 Score=95.40 Aligned_cols=53 Identities=38% Similarity=1.068 Sum_probs=47.9
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
+.++...|.+|+.+ +.|++||.|+++||+.|++|++..+|+++|+|+.|..++
T Consensus 7 ~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~g 59 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEG 59 (61)
T ss_dssp SSCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGGS
T ss_pred cCCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccccc
Confidence 45567889999986 899999999999999999999999999999999998753
No 28
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=4e-13 Score=93.07 Aligned_cols=51 Identities=39% Similarity=1.062 Sum_probs=46.5
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCcc
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSH 76 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~ 76 (342)
++.++..|.+|+.. +.||.||.|+++||+.|+.|++..+|.++|+|+.|..
T Consensus 5 ~~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 5 SSGHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred cCCCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 45567889999987 8999999999999999999999999999999999964
No 29
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.34 E-value=5.9e-13 Score=95.00 Aligned_cols=51 Identities=35% Similarity=0.736 Sum_probs=45.9
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
.....|.+|+.+ +.||+||.|+++||+.|+.|++..+|.++|+|+.|....
T Consensus 10 ~~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 10 APGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 345679999876 789999999999999999999999999999999998754
No 30
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.30 E-value=8.9e-13 Score=92.64 Aligned_cols=50 Identities=40% Similarity=1.059 Sum_probs=46.3
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.++..|.+|+.+ |.||.||.|+.+||+.|++|++..+|.++|+|+.|...
T Consensus 3 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 457889999987 89999999999999999999999999999999999774
No 31
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.29 E-value=5.7e-13 Score=95.59 Aligned_cols=57 Identities=28% Similarity=0.866 Sum_probs=49.3
Q ss_pred Cccccccccccccc--CCCCCeeecCCCCcccccCccCCCCCC--C-CCCCccCccCccCCC
Q 019353 23 PDDDDSRCEKCGSG--DFPDELLLCDKCDKGFHLFCLRPILVS--V-PKGSWFCPSCSHHKR 79 (342)
Q Consensus 23 d~~~~~~C~iC~~~--~~~g~~i~Cd~C~~~~H~~C~~p~~~~--~-p~~~w~C~~C~~~~~ 79 (342)
++.+...|.+|+.+ ++++.||+||.|+.+||+.|++|++.. + |.++|+|+.|.....
T Consensus 2 ~~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 2 SSGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 45678899999987 456999999999999999999999876 3 888999999988643
No 32
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.28 E-value=1.3e-12 Score=96.11 Aligned_cols=58 Identities=24% Similarity=0.620 Sum_probs=50.5
Q ss_pred CCCCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 20 YESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 20 ~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+.++++..+|.+|+..++.+.||+||.|+.|||..|+++++...+.++|+|+.|..+
T Consensus 11 ~~~~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 11 RDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp ECSSSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred ccccCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 4445667788999999877678999999999999999999988888789999999875
No 33
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.28 E-value=2.3e-12 Score=93.19 Aligned_cols=49 Identities=47% Similarity=1.242 Sum_probs=45.7
Q ss_pred ccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCC-CccCccCccC
Q 019353 29 RCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKG-SWFCPSCSHH 77 (342)
Q Consensus 29 ~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~-~w~C~~C~~~ 77 (342)
.|.+|+..++.+.||+||.|+++||+.|++||+..+|++ +|+|+.|..+
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 678999888889999999999999999999999999999 9999999863
No 34
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=3.4e-12 Score=93.92 Aligned_cols=48 Identities=44% Similarity=1.182 Sum_probs=45.7
Q ss_pred ccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCC-CccCccCcc
Q 019353 29 RCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKG-SWFCPSCSH 76 (342)
Q Consensus 29 ~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~-~w~C~~C~~ 76 (342)
.|.+|+..++.+.||+||.|+.+||+.|++||+..+|++ +|+|+.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 899999988889999999999999999999999999999 999999974
No 35
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.24 E-value=1.1e-12 Score=99.23 Aligned_cols=54 Identities=30% Similarity=0.808 Sum_probs=47.1
Q ss_pred CcccccccccccccC--CCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGD--FPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~--~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
..++...|.+|+.++ +++.||+||.|+.+||+.|++|++ +|+++|+|+.|....
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHT
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCcc
Confidence 445678999999874 667999999999999999999884 889999999998864
No 36
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.22 E-value=2.6e-12 Score=93.02 Aligned_cols=55 Identities=31% Similarity=0.800 Sum_probs=48.3
Q ss_pred CCCcccccccccccccC--CCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 21 ESPDDDDSRCEKCGSGD--FPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 21 ~~d~~~~~~C~iC~~~~--~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+.+..+...|.+|+.++ +++.||+||.|+.+||+.|++|+. +|+++|+|+.|..+
T Consensus 10 ~~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 10 QSLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQS 66 (71)
T ss_dssp CCCCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred ccCCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCc
Confidence 45667788999999874 778999999999999999999873 89999999999874
No 37
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.19 E-value=4.3e-12 Score=96.09 Aligned_cols=55 Identities=22% Similarity=0.655 Sum_probs=47.9
Q ss_pred cccccccccccccCC--CCCeeecCCCCcccccCccCCCCCC----CCCCCccCccCccCC
Q 019353 24 DDDDSRCEKCGSGDF--PDELLLCDKCDKGFHLFCLRPILVS----VPKGSWFCPSCSHHK 78 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~--~g~~i~Cd~C~~~~H~~C~~p~~~~----~p~~~w~C~~C~~~~ 78 (342)
.++...|.+|+.+++ ++.||+||.|+.+||+.|+.|++.. +|.++|+|..|....
T Consensus 13 ~e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 13 MEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp HHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 345678999998854 4799999999999999999999985 899999999998754
No 38
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.18 E-value=1.1e-11 Score=91.12 Aligned_cols=48 Identities=48% Similarity=1.267 Sum_probs=44.7
Q ss_pred ccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCC-ccCccCcc
Q 019353 29 RCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGS-WFCPSCSH 76 (342)
Q Consensus 29 ~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~-w~C~~C~~ 76 (342)
.|.+|+..++++.||+||.|+++||+.|+.||+..+|+++ |+|+.|..
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 6888999888899999999999999999999999999998 99999974
No 39
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.17 E-value=2.7e-11 Score=93.54 Aligned_cols=50 Identities=26% Similarity=0.638 Sum_probs=43.9
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
...| +|+..++++.||+||.|..|||..|++|++..+|+ .|+|+.|.++.
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 3445 89999889999999999999999999999888775 69999998764
No 40
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.17 E-value=4.6e-11 Score=86.48 Aligned_cols=54 Identities=33% Similarity=0.908 Sum_probs=45.2
Q ss_pred CCCcccccccccccccCCCCCeeecCC--CC-cccccCccCCCCCCCCCCCccCccCccCC
Q 019353 21 ESPDDDDSRCEKCGSGDFPDELLLCDK--CD-KGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 21 ~~d~~~~~~C~iC~~~~~~g~~i~Cd~--C~-~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
..|+++..+| +|+..+ .|.||+||. |. .|||..|++ +...|.+.|+|+.|....
T Consensus 10 ~~d~~~~~~C-~C~~~~-~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 10 PVDPNEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCCTTSCCCS-TTCCCS-CSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred ccCCCCCCEE-ECCCCC-CCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 3466667788 899874 489999999 87 799999999 778888999999998764
No 41
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.15 E-value=1.8e-11 Score=107.62 Aligned_cols=53 Identities=42% Similarity=0.987 Sum_probs=48.6
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
++.++.+|.+|+.+ |.+++||+|+++||..|+.|++..+|.++|+|+.|....
T Consensus 3 ~d~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 3 DDPNEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CCSSCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 55677889999987 789999999999999999999999999999999999864
No 42
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.12 E-value=1.4e-10 Score=87.68 Aligned_cols=53 Identities=34% Similarity=0.928 Sum_probs=44.3
Q ss_pred CCcccccccccccccCCCCCeeecCC--CC-cccccCccCCCCCCCCCCCccCccCccCC
Q 019353 22 SPDDDDSRCEKCGSGDFPDELLLCDK--CD-KGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 22 ~d~~~~~~C~iC~~~~~~g~~i~Cd~--C~-~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
.|+++..+| +|+... .|.||+||. |. .|||..|++ +...|.+.|+|+.|....
T Consensus 31 ~d~~e~~yC-iC~~~~-~g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCSCCCBCS-TTCCBC-CSCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred cCCCCCcEE-ECCCCC-CCCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 355566777 999874 489999999 77 799999999 677788999999998764
No 43
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.11 E-value=4.5e-11 Score=103.21 Aligned_cols=50 Identities=42% Similarity=1.013 Sum_probs=46.4
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
++.+|.+|+.+ |.+++||+|+++||..|+.|++..+|.++|+|+.|....
T Consensus 3 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 56789999987 889999999999999999999999999999999998864
No 44
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.08 E-value=5.7e-11 Score=85.28 Aligned_cols=61 Identities=20% Similarity=0.366 Sum_probs=45.3
Q ss_pred CCCCCCCCCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 15 HRPITYESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 15 ~~~~~~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+.++....++.+..+| +|+..++++.||+||.|..|||..|++......| +.|+|+.|...
T Consensus 7 ~~~~~~~~~~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 7 HSSGRENLYFQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp -------CTTTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred CCcccccCCCCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 3445555566677788 9999887778999999999999999997655444 57999999764
No 45
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.07 E-value=2.9e-11 Score=84.71 Aligned_cols=52 Identities=35% Similarity=0.945 Sum_probs=41.0
Q ss_pred CCcccccccccccccCCCCCeeecCC--CC-cccccCccCCCCCCCCCCCccCccCccC
Q 019353 22 SPDDDDSRCEKCGSGDFPDELLLCDK--CD-KGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 22 ~d~~~~~~C~iC~~~~~~g~~i~Cd~--C~-~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.|+++..+| +|+..+ .|.||+||. |. .|||..|++ +..+|.+.|+|+.|..+
T Consensus 5 ~d~~e~~~C-~C~~~~-~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 5 VDPNEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp ----CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred cCCCCCCEE-ECCCcC-CCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 466667777 899874 489999999 66 899999999 77888899999999763
No 46
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.06 E-value=3.4e-11 Score=83.97 Aligned_cols=51 Identities=35% Similarity=0.951 Sum_probs=41.4
Q ss_pred CcccccccccccccCCCCCeeecCC--CC-cccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDK--CD-KGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~--C~-~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
|+++..+| +|+..+ .|.||+||. |+ .|||..|++ +...|.+.|+|+.|..+
T Consensus 5 d~~e~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 5 GSNEPTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp ---CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CCCCCcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 55667777 999874 489999999 77 699999999 77888899999999764
No 47
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.06 E-value=7.4e-11 Score=93.78 Aligned_cols=58 Identities=38% Similarity=0.954 Sum_probs=50.7
Q ss_pred CCCCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 20 YESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 20 ~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+.+.-.+-..|.+|+..++++.|++||.|+++||+.|++||+..+|+++|+|+.|...
T Consensus 51 ~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 51 YKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp TTCCCGGGCCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CccCccccCccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 3444445567999999888899999999999999999999999999999999999764
No 48
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.06 E-value=6.4e-11 Score=103.93 Aligned_cols=50 Identities=46% Similarity=1.218 Sum_probs=41.8
Q ss_pred cccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCC-CccCccCccC
Q 019353 28 SRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKG-SWFCPSCSHH 77 (342)
Q Consensus 28 ~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~-~w~C~~C~~~ 77 (342)
..|.+|+..++.+.|++||.|+.+||+.|++||+..+|.+ +|+|+.|...
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 4799999988889999999999999999999999999999 9999999753
No 49
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.03 E-value=2e-10 Score=90.95 Aligned_cols=58 Identities=34% Similarity=0.853 Sum_probs=49.6
Q ss_pred CCCCccccccccccccc-CCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 20 YESPDDDDSRCEKCGSG-DFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 20 ~~~d~~~~~~C~iC~~~-~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+.+.-.+-..|.+|+.. ++++.+++||.|+++||+.|+.|++..+|+++|+|+.|.++
T Consensus 54 ~~W~C~~C~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~k 112 (112)
T 3v43_A 54 LRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPR 112 (112)
T ss_dssp SCCCCTTTCCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSCC
T ss_pred cccccccCCccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCCc
Confidence 34555555689999975 56689999999999999999999999999999999999863
No 50
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.03 E-value=5.8e-11 Score=83.59 Aligned_cols=52 Identities=33% Similarity=0.885 Sum_probs=41.0
Q ss_pred CCcccccccccccccCCCCCeeecCC--CC-cccccCccCCCCCCCCCCCccCccCccC
Q 019353 22 SPDDDDSRCEKCGSGDFPDELLLCDK--CD-KGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 22 ~d~~~~~~C~iC~~~~~~g~~i~Cd~--C~-~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.|+++..+| +|++.+ .|.||+||. |. .|||..|++ +...|.+.|+|+.|..+
T Consensus 6 ~d~~e~~yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 6 IDPNEPTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp ----CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred cCCCCCcEE-ECCCCC-CCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 466667778 999874 479999999 55 999999999 66778899999999765
No 51
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.99 E-value=2.1e-10 Score=99.30 Aligned_cols=49 Identities=33% Similarity=0.819 Sum_probs=45.3
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
+..|.+|+.+ |.+++||+|+++||..|+.|++..+|.++|+|+.|....
T Consensus 2 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4679999987 789999999999999999999999999999999998763
No 52
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.96 E-value=4.4e-10 Score=88.90 Aligned_cols=59 Identities=34% Similarity=0.838 Sum_probs=51.6
Q ss_pred CCCCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 20 YESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 20 ~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
+.+.-.+-..|.+|+..+++..|++||.|+++||+.|+.|++..+|+++|+|+.|....
T Consensus 47 ~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 47 AGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp TTCCCTTTCCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cCccCCcCCcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 45555556689999999888899999999999999999999999999999999997753
No 53
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.93 E-value=4.7e-10 Score=87.47 Aligned_cols=53 Identities=40% Similarity=0.946 Sum_probs=45.7
Q ss_pred CCCCcccccccccccccCCCCCeeecC--CCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 20 YESPDDDDSRCEKCGSGDFPDELLLCD--KCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 20 ~~~d~~~~~~C~iC~~~~~~g~~i~Cd--~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+.++.++.+|.+|+.+ |.||+|| .|++|||+.|++ +..+|+++|+|+.|...
T Consensus 8 ~~~~~~~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 8 TEPKQMHEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp --CCCSSCSSCTTTCCC---SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCcCCCCCCCCcCCCC---CcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 34456678899999966 8999999 899999999999 88999999999999765
No 54
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.90 E-value=5.7e-10 Score=84.12 Aligned_cols=50 Identities=28% Similarity=0.772 Sum_probs=40.3
Q ss_pred CcccccccccccccCCCCCeeecCCCC---cccccCccCCCCCCCCCCCccCcc-Ccc
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCD---KGFHLFCLRPILVSVPKGSWFCPS-CSH 76 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~---~~~H~~C~~p~~~~~p~~~w~C~~-C~~ 76 (342)
|+++..+| +|+..+ .|.||.||.|+ .|||..|++ +...|.+.|+|+. |..
T Consensus 22 ~~~~~~yC-iC~~~~-~g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 22 NNQEEVYC-FCRNVS-YGPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp --CCSCCS-TTTCCC-SSSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCCCCcEE-EeCCCC-CCCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 44556667 999864 37899999976 899999999 6778889999999 975
No 55
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.88 E-value=8.9e-10 Score=80.13 Aligned_cols=55 Identities=25% Similarity=0.520 Sum_probs=43.2
Q ss_pred cccccccccccccCCCC-CeeecCCCCcccccCccCCCCCCCCCCCccCccCccCCC
Q 019353 24 DDDDSRCEKCGSGDFPD-ELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHKR 79 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g-~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~~ 79 (342)
++...+| +|+..+++| .||+||.|..|||..|++..........|+|+.|..+..
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~ 68 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSG 68 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCS
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCC
Confidence 4445667 799987666 799999999999999999764333346899999988654
No 56
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.87 E-value=9.2e-10 Score=81.31 Aligned_cols=55 Identities=22% Similarity=0.486 Sum_probs=43.7
Q ss_pred CcccccccccccccCCCCCeeecC--CCCcccccCccCCCCCC-----CCCCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCD--KCDKGFHLFCLRPILVS-----VPKGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd--~C~~~~H~~C~~p~~~~-----~p~~~w~C~~C~~~~ 78 (342)
+++...+| +|+..++++.||+|| .|..|||..|++..... .....|+|+.|...+
T Consensus 12 ~~~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 12 QPEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp SCCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCCCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 44556777 899998889999999 99999999999955332 112579999998864
No 57
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.85 E-value=8.9e-10 Score=78.26 Aligned_cols=55 Identities=25% Similarity=0.600 Sum_probs=43.8
Q ss_pred cccccccccccccC-CCCCeeecCCCCcccccCccCCCCCCCC-CCCccCccCccCC
Q 019353 24 DDDDSRCEKCGSGD-FPDELLLCDKCDKGFHLFCLRPILVSVP-KGSWFCPSCSHHK 78 (342)
Q Consensus 24 ~~~~~~C~iC~~~~-~~g~~i~Cd~C~~~~H~~C~~p~~~~~p-~~~w~C~~C~~~~ 78 (342)
+++..+|.+|+... +++.||+||.|..|||..|++....... ...|+|+.|..+.
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 45677899999985 4689999999999999999996543322 2579999998754
No 58
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.81 E-value=1.8e-09 Score=77.53 Aligned_cols=54 Identities=22% Similarity=0.491 Sum_probs=40.6
Q ss_pred CcccccccccccccCCCCCeeecCC--CCcccccCccCCCCCC----CCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDK--CDKGFHLFCLRPILVS----VPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~--C~~~~H~~C~~p~~~~----~p~~~w~C~~C~~~ 77 (342)
++++...| +|+..+++|.||+||. |..|||..|++..... .....|+|+.|+.+
T Consensus 6 ~~e~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 6 QPEAKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp CSSCEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCCCCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 34455666 8999888999999995 9999999999853221 11236999999764
No 59
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.74 E-value=9.5e-10 Score=80.88 Aligned_cols=53 Identities=23% Similarity=0.536 Sum_probs=41.7
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCCCCCC-----CCCCccCccCccCCCC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSV-----PKGSWFCPSCSHHKRP 80 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~-----p~~~w~C~~C~~~~~~ 80 (342)
..+| +|+...+++.||+||.|..|||..|++...... ....|+|+.|.....+
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 4566 899998778999999999999999999543211 2357999999886544
No 60
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.71 E-value=4.7e-09 Score=71.20 Aligned_cols=46 Identities=22% Similarity=0.481 Sum_probs=38.4
Q ss_pred cccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCcc
Q 019353 30 CEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSH 76 (342)
Q Consensus 30 C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~ 76 (342)
-++|+..++++.||+||.|..|||..|++......| +.|+|+.|..
T Consensus 6 ~C~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 6 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp CSTTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred EEEeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 348999877789999999999999999997654444 5799999964
No 61
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.65 E-value=6.1e-09 Score=75.02 Aligned_cols=50 Identities=34% Similarity=0.832 Sum_probs=40.6
Q ss_pred cccccccccccccCCCCCeeecCCCC---cccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCD---KGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~---~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+++..+| +|+.. ++|.||.||.|+ .|||..|++ +...|.+.|+|+.|...
T Consensus 3 ~~~~~yC-~C~~~-~~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 3 SGSSGYC-ICNQV-SYGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CSCCCCS-TTSCC-CCSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHH
T ss_pred CCCCeEE-EcCCC-CCCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCcc
Confidence 3455666 69887 457999999975 899999999 56677889999999874
No 62
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.64 E-value=4.4e-09 Score=85.91 Aligned_cols=52 Identities=29% Similarity=0.717 Sum_probs=45.9
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCC-------CCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVS-------VPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~-------~p~~~w~C~~C~~~ 77 (342)
++-++.+|.+|+.+ |.+++||+|++.||..|+.|++.. .|.++|.|..|.+.
T Consensus 59 ~Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 59 SDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TTSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 34468899999998 999999999999999999999862 47889999999875
No 63
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.59 E-value=3.9e-08 Score=77.62 Aligned_cols=53 Identities=23% Similarity=0.706 Sum_probs=46.0
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCc
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCS 75 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~ 75 (342)
.+.++.+|.+|+.+++.+.||.|+.|++.||..|+++++..++.+.|+|+.|.
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 34577899999998666677999999999999999998877777899999986
No 64
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.58 E-value=1.6e-08 Score=74.83 Aligned_cols=53 Identities=19% Similarity=0.352 Sum_probs=40.7
Q ss_pred cccccccccccCC-CCCeeecCCCCcccccCccCCCCCCC-CCCCccCccCccCCC
Q 019353 26 DDSRCEKCGSGDF-PDELLLCDKCDKGFHLFCLRPILVSV-PKGSWFCPSCSHHKR 79 (342)
Q Consensus 26 ~~~~C~iC~~~~~-~g~~i~Cd~C~~~~H~~C~~p~~~~~-p~~~w~C~~C~~~~~ 79 (342)
+..+| +|+...+ ++.||+||.|..|||..|++...... ....|+|+.|.....
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccC
Confidence 34455 9999854 78999999999999999999543222 135799999998653
No 65
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.55 E-value=7e-09 Score=73.55 Aligned_cols=52 Identities=25% Similarity=0.581 Sum_probs=39.3
Q ss_pred cccccccccccccC-CCCCeeecC-CCCcccccCccCCCCC------CCCCCCccCccCc
Q 019353 24 DDDDSRCEKCGSGD-FPDELLLCD-KCDKGFHLFCLRPILV------SVPKGSWFCPSCS 75 (342)
Q Consensus 24 ~~~~~~C~iC~~~~-~~g~~i~Cd-~C~~~~H~~C~~p~~~------~~p~~~w~C~~C~ 75 (342)
++....|.+|++.. ++.+||+|| .|..|||..|++.... ..|...|+|+.|.
T Consensus 5 ~~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 5 SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ----CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 44567899999984 567999999 9999999999994421 1356689999985
No 66
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.52 E-value=2.1e-08 Score=78.20 Aligned_cols=51 Identities=27% Similarity=0.613 Sum_probs=41.0
Q ss_pred ccccccccc-CCCCCeeecC-CCCcccccCccCCCCC------CCCCCCccCccCccCC
Q 019353 28 SRCEKCGSG-DFPDELLLCD-KCDKGFHLFCLRPILV------SVPKGSWFCPSCSHHK 78 (342)
Q Consensus 28 ~~C~iC~~~-~~~g~~i~Cd-~C~~~~H~~C~~p~~~------~~p~~~w~C~~C~~~~ 78 (342)
..|.+|.+. .+++.||.|| .|..|||..|++.... ..|...|+|+.|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 469999998 4567899998 9999999999995421 1355789999998864
No 67
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.50 E-value=1.5e-08 Score=68.68 Aligned_cols=47 Identities=21% Similarity=0.526 Sum_probs=36.2
Q ss_pred ccccccccCC-CCCeeecC-CCCcccccCccCCCCCCCCCCCccCccCc
Q 019353 29 RCEKCGSGDF-PDELLLCD-KCDKGFHLFCLRPILVSVPKGSWFCPSCS 75 (342)
Q Consensus 29 ~C~iC~~~~~-~g~~i~Cd-~C~~~~H~~C~~p~~~~~p~~~w~C~~C~ 75 (342)
.|.+|+...+ ++.||+|| .|..|||..|++..........|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4789999864 57899999 89999999999954322223679999984
No 68
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.47 E-value=2.3e-08 Score=73.18 Aligned_cols=53 Identities=21% Similarity=0.410 Sum_probs=40.6
Q ss_pred cccccccccccCC-CCCeeecCCCCcccccCccCCCCCCCCC-CCccCccCccCC
Q 019353 26 DDSRCEKCGSGDF-PDELLLCDKCDKGFHLFCLRPILVSVPK-GSWFCPSCSHHK 78 (342)
Q Consensus 26 ~~~~C~iC~~~~~-~g~~i~Cd~C~~~~H~~C~~p~~~~~p~-~~w~C~~C~~~~ 78 (342)
+..+-++|+...+ ++.||+||.|..|||..|++......+. ..|+|+.|....
T Consensus 8 ~~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 8 TVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CCCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CCeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 3444559998754 6899999999999999999965433332 579999998753
No 69
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.41 E-value=1.9e-08 Score=85.82 Aligned_cols=55 Identities=20% Similarity=0.520 Sum_probs=41.7
Q ss_pred CcccccccccccccC-CCCCeeecCCCCcccccCccCCCCCC-CCCCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGD-FPDELLLCDKCDKGFHLFCLRPILVS-VPKGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~-~~g~~i~Cd~C~~~~H~~C~~p~~~~-~p~~~w~C~~C~~~~ 78 (342)
++++..+| +|+... +.+.||+||.|..|||..|++..... ...+.|+|+.|....
T Consensus 4 ~~~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 4 GSDTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp ---CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 44567788 999975 46889999999999999999854322 234689999998753
No 70
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.38 E-value=2.2e-08 Score=80.33 Aligned_cols=52 Identities=29% Similarity=0.767 Sum_probs=44.3
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCC-----CC--CCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILV-----SV--PKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~-----~~--p~~~w~C~~C~~~ 77 (342)
|+-+..+|.+|+.+ |++++||.|++.||..|+.|++. ++ |.++|.|..|.+.
T Consensus 53 ~Dg~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 53 SDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TTSCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 34457889999988 99999999999999999998743 33 7789999999885
No 71
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.10 E-value=2.3e-07 Score=91.10 Aligned_cols=56 Identities=20% Similarity=0.336 Sum_probs=41.3
Q ss_pred CcccccccccccccCC-CCCeeecCCCCcccccCccCCCCCCCC-CCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGDF-PDELLLCDKCDKGFHLFCLRPILVSVP-KGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~-~g~~i~Cd~C~~~~H~~C~~p~~~~~p-~~~w~C~~C~~~~ 78 (342)
+++.....|+|+...+ ++.||+||.|..|||..|++....... .+.|+|+.|....
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 3334444459999754 789999999999999999995433222 2579999998753
No 72
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.04 E-value=2.1e-06 Score=84.81 Aligned_cols=44 Identities=32% Similarity=0.403 Sum_probs=35.3
Q ss_pred eeeccCCCCCCCCCCCCCCcEEEEEEECCe-----------EEEEEEEcCCCCCCCeEEEecCCC
Q 019353 279 ARFVNGINNHTADGKKKQNLKCVRYNVNGE-----------CRVLLVANRDIAKGERLYYDYNGY 332 (342)
Q Consensus 279 aRfin~~~~hSC~~~~~pN~~~~~~~~~~~-----------~~i~l~A~rdI~~GEELt~dY~~~ 332 (342)
+.|+| |||. |||.+.. .++. .++.|+|+|||++|||||++|...
T Consensus 201 ~s~~N----HSC~----PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~ 255 (490)
T 3n71_A 201 LGLVN----HDCW----PNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDF 255 (490)
T ss_dssp GGGCE----ECSS----CSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCS
T ss_pred hhhcc----cCCC----CCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCC
Confidence 46778 9999 9997532 3321 399999999999999999999854
No 73
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.04 E-value=2.6e-06 Score=82.70 Aligned_cols=43 Identities=37% Similarity=0.420 Sum_probs=35.6
Q ss_pred eeeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCC
Q 019353 278 IARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGY 332 (342)
Q Consensus 278 ~aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~ 332 (342)
.+.|+| |||. |||... +. | .++.|+|+|||++|||||++|...
T Consensus 201 ~~s~~N----HsC~----PN~~~~--~~-~-~~~~~~a~r~I~~GeEl~isY~~~ 243 (429)
T 3qwp_A 201 SISLLN----HSCD----PNCSIV--FN-G-PHLLLRAVRDIEVGEELTICYLDM 243 (429)
T ss_dssp TGGGCE----ECSS----CSEEEE--EE-T-TEEEEEECSCBCTTCEEEECCSCS
T ss_pred hhHhhC----cCCC----CCeEEE--Ee-C-CEEEEEEeeeECCCCEEEEEecCC
Confidence 468899 9999 999664 22 3 368899999999999999999754
No 74
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.02 E-value=8.1e-07 Score=75.96 Aligned_cols=53 Identities=23% Similarity=0.524 Sum_probs=40.0
Q ss_pred ccccccccccCCCC----CeeecCCCCcccccCccCCCCC------CCCC-CCccCccCccCCC
Q 019353 27 DSRCEKCGSGDFPD----ELLLCDKCDKGFHLFCLRPILV------SVPK-GSWFCPSCSHHKR 79 (342)
Q Consensus 27 ~~~C~iC~~~~~~g----~~i~Cd~C~~~~H~~C~~p~~~------~~p~-~~w~C~~C~~~~~ 79 (342)
+..|.+|+...+++ .||+||.|..|||..|.+.... ..|+ ..|+|+.|.....
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 45799999975444 4999999999999999995421 1122 3699999998653
No 75
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.91 E-value=1.6e-06 Score=68.49 Aligned_cols=48 Identities=35% Similarity=0.762 Sum_probs=38.7
Q ss_pred cccccccccC-------CCCCeeecCCCCcccccCccCCCCC---CCCCCCccCccCc
Q 019353 28 SRCEKCGSGD-------FPDELLLCDKCDKGFHLFCLRPILV---SVPKGSWFCPSCS 75 (342)
Q Consensus 28 ~~C~iC~~~~-------~~g~~i~Cd~C~~~~H~~C~~p~~~---~~p~~~w~C~~C~ 75 (342)
.+|.+|..++ +.+.||.|+.|++.||..|++++.. .++.+.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 4688887653 4579999999999999999997642 3566789999984
No 76
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.87 E-value=1.1e-05 Score=78.47 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=34.8
Q ss_pred eeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCCCC
Q 019353 279 ARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNGYE 333 (342)
Q Consensus 279 aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~~~ 333 (342)
+.|+| |||. |||... +.+ .++.|+|+|||++|||||++|....
T Consensus 202 ~s~~N----HsC~----PN~~~~--~~~--~~~~~~a~r~I~~Geel~i~Y~~~~ 244 (433)
T 3qww_A 202 VALMN----HSCC----PNVIVT--YKG--TLAEVRAVQEIHPGDEVFTSYIDLL 244 (433)
T ss_dssp GGGSE----ECSS----CSEEEE--EET--TEEEEEESSCBCTTCEEEECCSCTT
T ss_pred ccccC----CCCC----CCceEE--EcC--CEEEEEeccCcCCCCEEEEeecCCc
Confidence 56888 9999 999653 233 3588999999999999999998643
No 77
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.83 E-value=9.1e-07 Score=85.73 Aligned_cols=53 Identities=19% Similarity=0.323 Sum_probs=40.7
Q ss_pred ccccccccccCC-CCCeeecCCCCcccccCccCCCCCCCCC-CCccCccCccCCC
Q 019353 27 DSRCEKCGSGDF-PDELLLCDKCDKGFHLFCLRPILVSVPK-GSWFCPSCSHHKR 79 (342)
Q Consensus 27 ~~~C~iC~~~~~-~g~~i~Cd~C~~~~H~~C~~p~~~~~p~-~~w~C~~C~~~~~ 79 (342)
....|+|+...+ ++.||+||.|..|||..|++......+. +.|+|+.|.....
T Consensus 4 ~~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 4 VPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHC
T ss_pred CCeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccC
Confidence 345669999754 7899999999999999999954332222 5799999987643
No 78
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.70 E-value=3.9e-06 Score=66.12 Aligned_cols=49 Identities=33% Similarity=0.646 Sum_probs=38.7
Q ss_pred cccccccccc------CCCCCeeecCCCCcccccCccCCC--C-CCCCCCCccCccCc
Q 019353 27 DSRCEKCGSG------DFPDELLLCDKCDKGFHLFCLRPI--L-VSVPKGSWFCPSCS 75 (342)
Q Consensus 27 ~~~C~iC~~~------~~~g~~i~Cd~C~~~~H~~C~~p~--~-~~~p~~~w~C~~C~ 75 (342)
..+|.+|... ++.+.||.|+.|++.||..|++.. + ..++.+.|+|+.|.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 4578999765 346799999999999999999742 2 23567789999996
No 79
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.60 E-value=1.5e-05 Score=77.95 Aligned_cols=40 Identities=25% Similarity=0.595 Sum_probs=31.7
Q ss_pred CCCCeeecCCCCcccccCccCCCCCCCC-CCCccCccCccC
Q 019353 38 FPDELLLCDKCDKGFHLFCLRPILVSVP-KGSWFCPSCSHH 77 (342)
Q Consensus 38 ~~g~~i~Cd~C~~~~H~~C~~p~~~~~p-~~~w~C~~C~~~ 77 (342)
.+..||+||.|..|||..|++....... .+.|+|+.|...
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred cCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 3469999999999999999995533322 257999999874
No 80
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.21 E-value=9.4e-05 Score=53.80 Aligned_cols=52 Identities=27% Similarity=0.670 Sum_probs=40.5
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCC------------CCCCCCCCccCccCccCC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPI------------LVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~------------~~~~p~~~w~C~~C~~~~ 78 (342)
++..|.||..- ..+.++.|..|.+.||..|+.+. +...+..-|.|..|..-.
T Consensus 14 ~D~~C~VC~~~-t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~ 77 (89)
T 1wil_A 14 NDEMCDVCEVW-TAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNIN 77 (89)
T ss_dssp CSCCCTTTCCC-CSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCC
T ss_pred CCcccCccccc-cccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhh
Confidence 56789999964 34899999999999999999865 222344579999997643
No 81
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.82 E-value=0.00038 Score=54.93 Aligned_cols=50 Identities=24% Similarity=0.535 Sum_probs=34.0
Q ss_pred cccccccc-CCCCCeeecCCCCcccccCccCCCCCCCCC----CCccCccCccCC
Q 019353 29 RCEKCGSG-DFPDELLLCDKCDKGFHLFCLRPILVSVPK----GSWFCPSCSHHK 78 (342)
Q Consensus 29 ~C~iC~~~-~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~----~~w~C~~C~~~~ 78 (342)
.|..|... +.+..|+.|+.|..|+|..|+++....+.. ..|.|+.|.+..
T Consensus 61 ~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 61 EVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp CBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred cccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 34444433 334569999999999999999987554322 349999998864
No 82
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=96.13 E-value=0.0016 Score=52.23 Aligned_cols=38 Identities=24% Similarity=0.622 Sum_probs=29.2
Q ss_pred CeeecCCCCcccccCccCCCC------CCCCC-CCccCccCccCC
Q 019353 41 ELLLCDKCDKGFHLFCLRPIL------VSVPK-GSWFCPSCSHHK 78 (342)
Q Consensus 41 ~~i~Cd~C~~~~H~~C~~p~~------~~~p~-~~w~C~~C~~~~ 78 (342)
.||+||.|..|||..|.+... ...|+ ..|.|+.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 489999999999999998542 23343 369999998753
No 83
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=95.96 E-value=0.0052 Score=59.74 Aligned_cols=41 Identities=27% Similarity=0.437 Sum_probs=33.5
Q ss_pred eeeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCC
Q 019353 279 ARFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNG 331 (342)
Q Consensus 279 aRfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~ 331 (342)
+=++| |||. ||+.+. .++ ..+.++|.|+|++||||+++||.
T Consensus 223 ~D~~N----H~~~----~~~~~~---~~~-~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 223 ADILN----HLAN----HNANLE---YSA-NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp GGGCE----ECSS----CSEEEE---ECS-SEEEEEESSCBCTTCEEEECCSS
T ss_pred HHHhc----CCCC----CCeEEE---EeC-CeEEEEECCCcCCCchhhccCCC
Confidence 45667 9999 998653 343 36889999999999999999986
No 84
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=95.88 E-value=0.0033 Score=60.85 Aligned_cols=46 Identities=26% Similarity=0.439 Sum_probs=33.8
Q ss_pred eeeccCCCCCCCCCCCCCCcEEEEEEECC-------eEEEEEEEcCCCCCCCeEEEecCCC
Q 019353 279 ARFVNGINNHTADGKKKQNLKCVRYNVNG-------ECRVLLVANRDIAKGERLYYDYNGY 332 (342)
Q Consensus 279 aRfin~~~~hSC~~~~~pN~~~~~~~~~~-------~~~i~l~A~rdI~~GEELt~dY~~~ 332 (342)
+=++| |+|. ||.....+.+++ ...+.++|.|+|++||||+++||..
T Consensus 190 ~D~~N----H~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 190 ADLIN----HSAG----VTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp TTSCE----ECTT----CCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred hHhhc----CCCC----cccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 34566 9999 875434444432 4579999999999999999999864
No 85
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.49 E-value=0.0093 Score=50.08 Aligned_cols=47 Identities=26% Similarity=0.379 Sum_probs=32.9
Q ss_pred cccccC-CCCCeeecCCCCcccccCccCCCCCC-CCC---CCccCccCccCC
Q 019353 32 KCGSGD-FPDELLLCDKCDKGFHLFCLRPILVS-VPK---GSWFCPSCSHHK 78 (342)
Q Consensus 32 iC~~~~-~~g~~i~Cd~C~~~~H~~C~~p~~~~-~p~---~~w~C~~C~~~~ 78 (342)
-||... -.-.|++|+.|..|||..|+...... .|- -.+.|..|...+
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 577753 34589999999999999999855433 331 246799998854
No 86
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=94.58 E-value=0.0086 Score=49.33 Aligned_cols=49 Identities=29% Similarity=0.790 Sum_probs=40.3
Q ss_pred ccccccccccCCCCCeeecC--CCCcccccCccCCCCCC------CCCCCccCccCccCC
Q 019353 27 DSRCEKCGSGDFPDELLLCD--KCDKGFHLFCLRPILVS------VPKGSWFCPSCSHHK 78 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd--~C~~~~H~~C~~p~~~~------~p~~~w~C~~C~~~~ 78 (342)
..+|.+|+.+ |.++.|| .|.+.|=..|+.--+.. ...+.|.|-.|.+..
T Consensus 79 ~~yC~wC~~G---g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 79 QSYCTICCGG---REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp BSSCTTTSCC---SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred cceeeEecCC---CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 6789999998 8999999 79999999998643322 345689999999964
No 87
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.05 E-value=0.03 Score=55.09 Aligned_cols=34 Identities=21% Similarity=0.148 Sum_probs=27.8
Q ss_pred CccEEeecCCCceeEEEccCCCCCCeEEEcccee
Q 019353 208 PPLMVEYDPKEGFTVQADRFIKDLTIITEYVGDV 241 (342)
Q Consensus 208 ~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Gev 241 (342)
..+.+...+..|+||+|+++|++|+.|+...-.+
T Consensus 93 ~~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~l 126 (497)
T 3smt_A 93 EGFEMVNFKEEGFGLRATRDIKAEELFLWVPRKL 126 (497)
T ss_dssp TTEEEEEETTTEEEEEESSCBCTTCEEEEEEGGG
T ss_pred cceEEEEcCCCccEEEEcccCCCCCEEEEcCHHH
Confidence 4688888888999999999999999997654433
No 88
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=92.15 E-value=0.071 Score=41.06 Aligned_cols=39 Identities=23% Similarity=0.579 Sum_probs=32.4
Q ss_pred ccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccC
Q 019353 29 RCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFC 71 (342)
Q Consensus 29 ~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C 71 (342)
.|.+|+.. ..+.|..|+.+||..|+.+.+...+.+.|+|
T Consensus 60 ~C~~C~k~----~~~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 60 QCDECSSA----AVSFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp BCTTTCSB----CCEECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCcCCCC----CCcCcCCCCcchhhhccCCcceecCCCCcee
Confidence 35567765 2388999999999999999998888888997
No 89
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=91.72 E-value=0.027 Score=53.06 Aligned_cols=50 Identities=26% Similarity=0.721 Sum_probs=40.5
Q ss_pred cccccccccccCCCCCeeecC--CCCcccccCccCCCCCC------CCCCCccCccCccCC
Q 019353 26 DDSRCEKCGSGDFPDELLLCD--KCDKGFHLFCLRPILVS------VPKGSWFCPSCSHHK 78 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd--~C~~~~H~~C~~p~~~~------~p~~~w~C~~C~~~~ 78 (342)
...+|.+|+.+ |.+++|| .|.+.|-..|+.--+.. ...+.|.|-.|.+..
T Consensus 92 ~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 92 YQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 37889999998 8999999 99999999998744422 233579999999974
No 90
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=88.69 E-value=0.21 Score=46.31 Aligned_cols=55 Identities=27% Similarity=0.582 Sum_probs=36.8
Q ss_pred CcccccccccccccCCC-CCe--eecC--CCCcccccCccCCCCCCCCC-----C--CccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFP-DEL--LLCD--KCDKGFHLFCLRPILVSVPK-----G--SWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~-g~~--i~Cd--~C~~~~H~~C~~p~~~~~p~-----~--~w~C~~C~~~ 77 (342)
+.+....|.||-....+ |.+ ..|+ .|+..||..|+...+...+. + --.|+.|...
T Consensus 304 ~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 304 EDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 34567789999986444 433 4798 89999999999854422111 1 1249999874
No 91
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=87.42 E-value=0.056 Score=37.04 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=35.7
Q ss_pred CcccccccccccccCCCCCeeec--CCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLC--DKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~C--d~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
|+++...|.||....++..+.-| .+.-.++|..|+...+... +.+.|+.|...
T Consensus 2 e~~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~--~~~~C~~C~~~ 56 (60)
T 1vyx_A 2 EDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTIS--RNTACQICGVV 56 (60)
T ss_dssp TTCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHH--TCSBCTTTCCB
T ss_pred CCCCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhC--CCCccCCCCCe
Confidence 45677889999876443333343 2334599999999776432 34789999874
No 92
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=86.45 E-value=0.36 Score=31.59 Aligned_cols=48 Identities=29% Similarity=0.517 Sum_probs=33.5
Q ss_pred cccccccccccCCCC-CeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPD-ELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g-~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...-.++ .......|+..||..|+...+.. ...|+.|...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 456799998764333 33444569999999999866544 3579999763
No 93
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=85.62 E-value=0.63 Score=45.45 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=31.2
Q ss_pred CCCCccEEeecCCCceeEEEccCCCCCCeEEEccce
Q 019353 205 GEWPPLMVEYDPKEGFTVQADRFIKDLTIITEYVGD 240 (342)
Q Consensus 205 ~~~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~Ge 240 (342)
+..+.+++..++.+|.||+|+++|++|++|..-..-
T Consensus 4 ~~~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P~ 39 (490)
T 3n71_A 4 GSMENVEVFTSEGKGRGLKATKEFWAADVIFAERAY 39 (490)
T ss_dssp TCCTTEEEEECSSSCEEEEESSCBCTTCEEEEECCS
T ss_pred CCCCceEEEecCCCCceEEeccCCCCCCEEEecCCc
Confidence 456789999999999999999999999999765543
No 94
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=84.62 E-value=0.84 Score=43.83 Aligned_cols=33 Identities=12% Similarity=-0.071 Sum_probs=28.9
Q ss_pred CCccEEeecCCCceeEEEccCCCCCCeEEEccc
Q 019353 207 WPPLMVEYDPKEGFTVQADRFIKDLTIITEYVG 239 (342)
Q Consensus 207 ~~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~G 239 (342)
...++++.++.+|.||+|+++|++|++|..-..
T Consensus 6 ~~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~P 38 (433)
T 3qww_A 6 RGGLERFCSAGKGRGLRALRPFHVGDLLFSCPA 38 (433)
T ss_dssp STTEEEEECTTSCEEEEESSCBCTTCEEEEEEC
T ss_pred CCcEEEeecCCCcCeEEECCCCCCCCEEEecCC
Confidence 467899999999999999999999999975533
No 95
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=83.93 E-value=0.21 Score=34.54 Aligned_cols=51 Identities=25% Similarity=0.443 Sum_probs=35.4
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+.+....|.||...-..+..+..-.|+..||..|+...+.. ...|+.|...
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 60 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVD 60 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSB
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCcc
Confidence 44456789999876444444555579999999999865433 2369999774
No 96
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=83.33 E-value=0.96 Score=31.87 Aligned_cols=51 Identities=24% Similarity=0.393 Sum_probs=34.8
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+..+...|.||...-.++..+.--.|...||..|+...+.. ...|+.|...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 61 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKS 61 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCC
T ss_pred cCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCc
Confidence 33456789999876433433333358999999999865543 2579999875
No 97
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.68 E-value=0.27 Score=34.66 Aligned_cols=50 Identities=24% Similarity=0.509 Sum_probs=36.1
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
..+...|.||...-.++..+..-.|+..||..|+...+.. ...|+.|...
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~ 69 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRAD 69 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCc
Confidence 3456789999976544555555669999999999865433 2479999764
No 98
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.61 E-value=0.6 Score=33.71 Aligned_cols=52 Identities=19% Similarity=0.376 Sum_probs=33.9
Q ss_pred cccccccccccccCC-CCCeee---cCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDF-PDELLL---CDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~-~g~~i~---Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+.+...|.||....+ ++.++. |.+...+||..|+...+... +...|+.|...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~--~~~~CplCr~~ 67 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS--DTRCCELCKYE 67 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH--CCSBCSSSCCB
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC--CCCCCCCCCCe
Confidence 345678999986543 334442 22234999999999765432 23689999885
No 99
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.44 E-value=0.49 Score=33.76 Aligned_cols=48 Identities=25% Similarity=0.457 Sum_probs=35.7
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
....|.||...-.+ -+.|..|...||..|+...+.... .-.|+.|...
T Consensus 14 ~i~~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 14 AVKICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp SSCBCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred CCCcCcchhhHccc--CCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 45679999986443 357889999999999987765432 2479999753
No 100
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=81.53 E-value=0.38 Score=35.47 Aligned_cols=49 Identities=24% Similarity=0.415 Sum_probs=35.0
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.....|.||...-..+..+..-.|+..||..|+...+.. .-.|+.|...
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~ 86 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCM 86 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCB
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCcc
Confidence 346779999876444544544559999999999876543 2479999864
No 101
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=79.11 E-value=0.61 Score=34.34 Aligned_cols=31 Identities=26% Similarity=0.596 Sum_probs=24.9
Q ss_pred ccccccccccCCCCCeeecCC--CCcccccCccC
Q 019353 27 DSRCEKCGSGDFPDELLLCDK--CDKGFHLFCLR 58 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~--C~~~~H~~C~~ 58 (342)
...|.+|.+. ..|-.|+|.. |..+||+.|..
T Consensus 17 ~l~C~iC~~~-~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 17 KLTCYLCKQK-GVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCBTTTTBC-CSSCEEECSCTTTCCEEEHHHHH
T ss_pred cCCCcCCCCC-CCcEeEecCCCCCCCcCcHHHHH
Confidence 3569999863 2389999976 99999999975
No 102
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=78.77 E-value=1.6 Score=41.63 Aligned_cols=32 Identities=6% Similarity=-0.106 Sum_probs=27.3
Q ss_pred CccEEeecCCCceeEEEccCCCCCCeEEEccc
Q 019353 208 PPLMVEYDPKEGFTVQADRFIKDLTIITEYVG 239 (342)
Q Consensus 208 ~~~~v~~~~~~G~Gv~a~~~i~~g~~I~ey~G 239 (342)
..++.+.++.+|.||+|+++|++|++|..-..
T Consensus 5 ~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P 36 (429)
T 3qwp_A 5 LKVEKFATANRGNGLRAVTPLRPGELLFRSDP 36 (429)
T ss_dssp CSEEEEECSSSSEEEEESSCBCTTCEEEEECC
T ss_pred cceeecccCCCCCeEEeCCCCCCCCEEEecCC
Confidence 45777889999999999999999999986433
No 103
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=78.74 E-value=2.1 Score=31.22 Aligned_cols=35 Identities=31% Similarity=0.670 Sum_probs=28.0
Q ss_pred CCeeecCCCC-cccccCccCCCCCCCCCCCccCccCccC
Q 019353 40 DELLLCDKCD-KGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 40 g~~i~Cd~C~-~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
=.+|.|..|+ ..-|..|.. +... ...|.|..|..-
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~--l~~~-~~~weC~~C~~v 79 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSS--LRPN-SKKWECNECLPA 79 (85)
T ss_dssp TBCEECSSSCCCEECSGGGT--CCTT-CSCCCCTTTSCC
T ss_pred EEEEeCcccCCchhHHHHhC--CcCC-CCCEECCcCccc
Confidence 4899999999 889999998 4333 346999999863
No 104
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=78.27 E-value=0.42 Score=31.17 Aligned_cols=48 Identities=23% Similarity=0.404 Sum_probs=33.6
Q ss_pred cccccccccccC-CCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGD-FPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~-~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...- +.+..+..-.|+..||..|+...+... ..|+.|...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 456799998763 334556667799999999998544332 568888753
No 105
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.25 E-value=0.77 Score=32.98 Aligned_cols=48 Identities=19% Similarity=0.575 Sum_probs=32.5
Q ss_pred cccccccccccCC-----------CCC-eeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDF-----------PDE-LLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~-----------~g~-~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
++..|.||...-+ .+. .+.--.|+..||..|+...+... -.|+.|...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC----CCCCCcCCC
Confidence 3556888887532 122 33334699999999999776553 379999874
No 106
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.12 E-value=0.52 Score=32.96 Aligned_cols=51 Identities=25% Similarity=0.376 Sum_probs=34.3
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+......|.||...-.++..+.--.|...||..|+...+... ..|+.|...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~----~~CP~Cr~~ 61 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR----KVCPLCNMP 61 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC----SBCTTTCCB
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC----CcCCCcCcc
Confidence 334567899999874334333233599999999998654332 379999774
No 107
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=73.78 E-value=0.85 Score=35.24 Aligned_cols=38 Identities=18% Similarity=0.422 Sum_probs=29.3
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
-.+|.+|++.+ |+.|...+|+.|++++ .|.|..|...+
T Consensus 7 C~~C~~C~~~~-------C~~C~~c~~~~~~~~~-------~~~~~~c~~~~ 44 (117)
T 4bbq_A 7 CRKCKACVQGE-------CGVCHYCRDMKKFGGP-------GRMKQSCVLRQ 44 (117)
T ss_dssp CSCSHHHHSCC-------CSCSHHHHHSGGGTSC-------CCSCCCCGGGC
T ss_pred CCcCcCcCCcC-------CCCCCCCcCCcccCCC-------Cccccchhhee
Confidence 35677888762 9999999999999866 38888886643
No 108
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=72.82 E-value=1.2 Score=34.04 Aligned_cols=51 Identities=29% Similarity=0.552 Sum_probs=32.9
Q ss_pred ccccccccccCCCC---------------CeeecCCCCcccccCccCCCCCCCC-CCCccCccCccC
Q 019353 27 DSRCEKCGSGDFPD---------------ELLLCDKCDKGFHLFCLRPILVSVP-KGSWFCPSCSHH 77 (342)
Q Consensus 27 ~~~C~iC~~~~~~g---------------~~i~Cd~C~~~~H~~C~~p~~~~~p-~~~w~C~~C~~~ 77 (342)
+..|.||...-.+. ..+..-.|+..||..|+...+.... .....|+.|...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCc
Confidence 45799997652111 2333457999999999986653211 234689999874
No 109
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.82 E-value=2.4 Score=29.26 Aligned_cols=47 Identities=15% Similarity=0.305 Sum_probs=31.9
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
..+...|.||...-.+. +.- .|+..||..|+...+.. ...|+.|...
T Consensus 12 ~~~~~~C~IC~~~~~~~--~~~-~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 58 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHP--VSL-PCKHVFCYLCVKGASWL----GKRCALCRQE 58 (71)
T ss_dssp SSSCCBCSSSSSBCSSE--EEE-TTTEEEEHHHHHHCTTC----SSBCSSSCCB
T ss_pred CCCCCCCccCCcccCCC--EEc-cCCCHHHHHHHHHHHHC----CCcCcCcCch
Confidence 34567799998763222 222 59999999998855433 2589999874
No 110
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=67.38 E-value=3.8 Score=39.98 Aligned_cols=41 Identities=32% Similarity=0.441 Sum_probs=30.5
Q ss_pred eeccCCCCCCCCCCCCCCcEEEEEEECCeEEEEEEEcCCCCCCCeEEEecCC
Q 019353 280 RFVNGINNHTADGKKKQNLKCVRYNVNGECRVLLVANRDIAKGERLYYDYNG 331 (342)
Q Consensus 280 Rfin~~~~hSC~~~~~pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt~dY~~ 331 (342)
=++| |||. ||. ..+..+ ...+.++|.|+|++||||+++|+.
T Consensus 274 Dm~N----H~~~----~~~--~~~~~~-~~~~~~~a~~~i~~Geei~isYG~ 314 (497)
T 3smt_A 274 DMCN----HTNG----LIT--TGYNLE-DDRCECVALQDFRAGEQIYIFYGT 314 (497)
T ss_dssp GGCE----ECSC----SEE--EEEETT-TTEEEEEESSCBCTTCEEEECCCS
T ss_pred Hhhc----CCCc----ccc--eeeecc-CCeEEEEeCCccCCCCEEEEeCCC
Confidence 3556 9999 853 223332 336788999999999999999985
No 111
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=66.73 E-value=1.3 Score=34.41 Aligned_cols=47 Identities=19% Similarity=0.475 Sum_probs=0.4
Q ss_pred ccccccccccCCC---------------CCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 27 DSRCEKCGSGDFP---------------DELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 27 ~~~C~iC~~~~~~---------------g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
...|.||...-.+ +..+.--.|...||..|+...+... -.|+.|...
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~----~~CP~Cr~~ 109 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR----QVCPLDNRE 109 (117)
T ss_dssp C-----------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcC----CcCCCCCCe
Confidence 4679999875221 1122223799999999999776552 469999764
No 112
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.64 E-value=2.1 Score=30.76 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=14.2
Q ss_pred EEEEcCCCCCCCeEEE
Q 019353 312 LLVANRDIAKGERLYY 327 (342)
Q Consensus 312 ~l~A~rdI~~GEELt~ 327 (342)
.|||.|||++||-||-
T Consensus 8 slvA~rdI~~Gevit~ 23 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTM 23 (79)
T ss_dssp EEEESSCBCTTCBCCG
T ss_pred EEEEeCccCCCCCcCH
Confidence 5899999999999984
No 113
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.53 E-value=4.1 Score=26.44 Aligned_cols=47 Identities=17% Similarity=0.444 Sum_probs=29.9
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSC 74 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C 74 (342)
..+...|.||...-.+..++ .|+..||..|+...+... .....|+.|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKEPVII---ECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred cccCCCCccCCcccCccEeC---CCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 34567899999864333332 588889999987654332 123567766
No 114
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.42 E-value=3.8 Score=28.14 Aligned_cols=51 Identities=22% Similarity=0.447 Sum_probs=34.2
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+-.+...|.||...-.+ ..+. .|+..||..|+...+.. ......|+.|...
T Consensus 16 ~~~~~~~C~IC~~~~~~-~~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 16 KLQEEVICPICLDILQK-PVTI--DCGHNFCLKCITQIGET-SCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCCCBCTTTCSBCSS-EEEC--TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCC
T ss_pred hCccCCEeccCCcccCC-eEEc--CCCChhhHHHHHHHHHc-CCCCCCCCCCCCc
Confidence 33456789999976332 2222 79999999999865442 1234689999875
No 115
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=61.50 E-value=5.9 Score=38.03 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=28.3
Q ss_pred CccEEeec-CCCceeEEEccCCCCCCeEEEccceee
Q 019353 208 PPLMVEYD-PKEGFTVQADRFIKDLTIITEYVGDVD 242 (342)
Q Consensus 208 ~~~~v~~~-~~~G~Gv~a~~~i~~g~~I~ey~Gev~ 242 (342)
+.+.+... ...|+||+|+++|++|+.|+...-.++
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~~ 73 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPRAAL 73 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGGC
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCcHHh
Confidence 45777654 478999999999999999988776663
No 116
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=60.85 E-value=1.9 Score=32.82 Aligned_cols=48 Identities=19% Similarity=0.411 Sum_probs=32.6
Q ss_pred cccccccccccCCCC---------------CeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPD---------------ELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g---------------~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...-.+. ..+.--.|...||..|+...+.. .-.|+.|...
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 346688887652211 12333579999999999977654 2579999875
No 117
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.29 E-value=3.5 Score=27.83 Aligned_cols=48 Identities=25% Similarity=0.519 Sum_probs=33.0
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
..+...|.||...-.+..+ -.|+..||..|+...+. .....|+.|...
T Consensus 12 ~~~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCSPKQ---TECGHRFCESCMAALLS---SSSPKCTACQES 59 (66)
T ss_dssp CCCCEECTTTCCEESSCCC---CSSSCCCCHHHHHHHHT---TSSCCCTTTCCC
T ss_pred CCcCCCCCCCChHhcCeeE---CCCCCHHHHHHHHHHHH---hCcCCCCCCCcC
Confidence 3456789999876333333 37888999999986553 224579999775
No 118
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=60.25 E-value=9.3 Score=26.43 Aligned_cols=50 Identities=18% Similarity=0.330 Sum_probs=33.9
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCC---CCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVP---KGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p---~~~w~C~~C~~~ 77 (342)
.+...|.||...-.+..++ .|+..||..|+...+.... .....|+.|...
T Consensus 10 ~~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~ 62 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGIS 62 (79)
T ss_dssp CCCCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCC
T ss_pred ccCCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCc
Confidence 4567899998763333332 6888999999986654421 235689999875
No 119
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=59.53 E-value=9.2 Score=25.03 Aligned_cols=18 Identities=33% Similarity=0.981 Sum_probs=12.7
Q ss_pred CCCCCCCCCccCccCccCC
Q 019353 60 ILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 60 ~~~~~p~~~w~C~~C~~~~ 78 (342)
+....|+ +|.|+.|...+
T Consensus 29 ~f~~lP~-dw~CP~Cg~~K 46 (52)
T 1e8j_A 29 KFEDLPD-DWACPVCGASK 46 (52)
T ss_dssp CTTSSCT-TCCCSSSCCCT
T ss_pred chHHCCC-CCcCCCCCCcH
Confidence 3345555 59999998864
No 120
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=58.57 E-value=5 Score=35.15 Aligned_cols=48 Identities=25% Similarity=0.472 Sum_probs=35.6
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
....|.+|..--. .-+.|..|...+|..|+.-.+... ..-.|+.|...
T Consensus 179 ~i~~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~~~--~~~~CP~C~~~ 226 (238)
T 3nw0_A 179 AVKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCNDY 226 (238)
T ss_dssp TCCBCTTTCSBCS--SCEECSSSCCEECHHHHHHHTTTC--SSCBCTTTCCB
T ss_pred CCCcCcchhhHHh--CCcccCccChHHHHHHHHHHHHhC--CCCCCCCCCCC
Confidence 3677999998643 347899999999999997544332 23579999764
No 121
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=58.15 E-value=11 Score=24.48 Aligned_cols=44 Identities=25% Similarity=0.492 Sum_probs=30.0
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.++...|.||...-.+-.++ .|+..|+..|+.. ....|+.|...
T Consensus 3 e~~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~-------~~~~CP~Cr~~ 46 (56)
T 1bor_A 3 EFQFLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA-------SGMQCPICQAP 46 (56)
T ss_dssp SCCCSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS-------SSSSCSSCCSS
T ss_pred cccCCCceEeCCccCCeEEc---CCCCcccHHHHcc-------CCCCCCcCCcE
Confidence 45667799998763333333 4777888888874 23579999875
No 122
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.15 E-value=3.2 Score=27.67 Aligned_cols=47 Identities=23% Similarity=0.482 Sum_probs=29.3
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSC 74 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C 74 (342)
-.+...|.||...-.+ ..+. .|+..||..|+...+... .....|+.|
T Consensus 17 ~~~~~~C~IC~~~~~~-p~~~--~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQK-PVTI--DCGHNFCLKCITQIGETS-CGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSS-CEEC--TTSSEECHHHHHHHHHHC-SSCCCCSCC
T ss_pred CccCCCCCcCCchhCC-eEEe--CCCCcchHHHHHHHHHcC-CCCCcCcCC
Confidence 3456789999876332 2222 799999999987554321 123467766
No 123
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=57.07 E-value=8.6 Score=27.26 Aligned_cols=50 Identities=22% Similarity=0.509 Sum_probs=32.3
Q ss_pred ccccccccccccCC--CCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 25 DDDSRCEKCGSGDF--PDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 25 ~~~~~C~iC~~~~~--~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
.+...|.||-..-+ +-...-| .|+..|+..|+.--+.. +...|+.|...-
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~~---~~~~CP~CR~~~ 60 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRTD---ENGLCPACRKPY 60 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTTS---SCSBCTTTCCBC
T ss_pred ccCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHhc---CCCCCCCCCCcc
Confidence 34567999998532 1122223 58888999998643322 357899998854
No 124
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=53.78 E-value=5.8 Score=27.30 Aligned_cols=35 Identities=29% Similarity=0.712 Sum_probs=25.4
Q ss_pred CCcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 22 SPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 22 ~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
++.++..+|.||... .++.|.+|+ ++.||..|...
T Consensus 3 ~~~ee~pWC~ICneD----AtlrC~gCd-----------------gDLYC~rC~rE 37 (67)
T 2d8v_A 3 SGSSGLPWCCICNED----ATLRCAGCD-----------------GDLYCARCFRE 37 (67)
T ss_dssp SSCCCCSSCTTTCSC----CCEEETTTT-----------------SEEECSSHHHH
T ss_pred CcCcCCCeeEEeCCC----CeEEecCCC-----------------CceehHHHHHH
Confidence 355678899999964 568888883 35788888664
No 125
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=51.85 E-value=1.2 Score=30.65 Aligned_cols=51 Identities=25% Similarity=0.542 Sum_probs=35.5
Q ss_pred CcccccccccccccC-C---CCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGD-F---PDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~-~---~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
..++...|.||...- + .+..+..-.|+..||..|+...+... -.|+.|...
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 60 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKK 60 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCCB
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC----CCCCCCCCc
Confidence 344567899998752 1 24555667899999999998544322 379999775
No 126
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=50.28 E-value=9.5 Score=27.85 Aligned_cols=48 Identities=21% Similarity=0.333 Sum_probs=25.8
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
.......|.+|+.-.|+..- ..-+-..-+.+....|+ +|.|+.|...+
T Consensus 31 ~~m~~y~C~vCGyvYD~~~G-------dp~~gI~pGT~fedlPd-dW~CPvCga~K 78 (87)
T 1s24_A 31 KAYLKWICITCGHIYDEALG-------DEAEGFTPGTRFEDIPD-DWCCPDCGATK 78 (87)
T ss_dssp -CCCEEEETTTTEEEETTSC-------CTTTTCCSCCCGGGCCT-TCCCSSSCCCG
T ss_pred cCCceEECCCCCeEecCCcC-------CcccCcCCCCChhHCCC-CCCCCCCCCCH
Confidence 44556788888865322110 00122233333445665 59999998854
No 127
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=49.50 E-value=3.7 Score=27.62 Aligned_cols=53 Identities=21% Similarity=0.445 Sum_probs=34.8
Q ss_pred ccccccccccccC-CCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGD-FPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~-~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
++..+|.+|..+. .||---.|.-|..-+-..|-+--........|.|..|..+
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQ 60 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHHH
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhhc
Confidence 4567899999873 4565566777777776667553222233346999999764
No 128
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=48.43 E-value=9.6 Score=28.78 Aligned_cols=48 Identities=19% Similarity=0.455 Sum_probs=33.5
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
..+...|.||...-.+ ..+. .|+..|+..|+...+.. +...|+.|...
T Consensus 12 ~~~~~~C~iC~~~~~~-p~~~--~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~ 59 (115)
T 3l11_A 12 SLSECQCGICMEILVE-PVTL--PCNHTLCKPCFQSTVEK---ASLCCPFCRRR 59 (115)
T ss_dssp CHHHHBCTTTCSBCSS-CEEC--TTSCEECHHHHCCCCCT---TTSBCTTTCCB
T ss_pred CCCCCCCccCCcccCc-eeEc--CCCCHHhHHHHHHHHhH---CcCCCCCCCcc
Confidence 3456789999976322 2222 69999999999865432 34789999875
No 129
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=47.93 E-value=29 Score=24.66 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=24.9
Q ss_pred CCCCCCCCCcccccccccccccCCCCCeeecCCCCcccccCccC
Q 019353 15 HRPITYESPDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLR 58 (342)
Q Consensus 15 ~~~~~~~~d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~ 58 (342)
+.+.....+......|..|+..-.+ ..+. .-+..||..|+.
T Consensus 13 ~~~~~~~~~~~~~~~C~~C~~~I~~-~~~~--a~~~~~H~~CF~ 53 (89)
T 1x64_A 13 TKVHGGAGSAQRMPLCDKCGSGIVG-AVVK--ARDKYRHPECFV 53 (89)
T ss_dssp CCCCCCCSCCCSCCBCTTTCCBCCS-CCEE--SSSCEECTTTCC
T ss_pred ccCCCCCCCCCcCCCcccCCCEecc-cEEE--ECCceECccCCE
Confidence 3333334455567889999987543 3332 355788887744
No 130
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.89 E-value=7.3 Score=27.27 Aligned_cols=51 Identities=24% Similarity=0.405 Sum_probs=32.9
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCC--CCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVS--VPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~--~p~~~w~C~~C~~~ 77 (342)
-.+...|.||...-.+-.++ .|+..||..|+...+.. ...+...|+.|...
T Consensus 16 ~~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQPLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCCCCTTTCSCCSSCBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred ccCCCCCCCCCcccCCceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 34567899999864332222 68989999998743322 01224689999875
No 131
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=47.33 E-value=3.4 Score=33.72 Aligned_cols=47 Identities=23% Similarity=0.475 Sum_probs=33.6
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...- ..-+.+..|+..||..|+...+.. +...|+.|...
T Consensus 53 ~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~ 99 (165)
T 2ckl_B 53 SELMCPICLDML--KNTMTTKECLHRFCADCIITALRS---GNKECPTCRKK 99 (165)
T ss_dssp HHHBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHHT---TCCBCTTTCCB
T ss_pred CCCCCcccChHh--hCcCEeCCCCChhHHHHHHHHHHh---CcCCCCCCCCc
Confidence 456899998753 234555689999999999755442 24679999875
No 132
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.29 E-value=4.8 Score=27.37 Aligned_cols=46 Identities=24% Similarity=0.451 Sum_probs=32.5
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
..+...|.||...-.+ .--.|+..||..|+...+. ....|+.|...
T Consensus 12 ~~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~ 57 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSD----RHRNCPICRLQ 57 (70)
T ss_dssp CCCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSC----CCSSCHHHHHC
T ss_pred CCCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHH----CcCcCCCcCCc
Confidence 3456789999886433 2236888999999986544 24689999764
No 133
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.29 E-value=3 Score=28.14 Aligned_cols=49 Identities=27% Similarity=0.589 Sum_probs=33.4
Q ss_pred ccccccccccccCC----CCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDF----PDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~----~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.||...-. .+..+.--.|+..||..|+...+.. .-.|+.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc----CCCCCCCCCc
Confidence 45677999987521 2344456689999999999854332 2369999764
No 134
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.59 E-value=9.1 Score=27.11 Aligned_cols=52 Identities=21% Similarity=0.333 Sum_probs=33.8
Q ss_pred ccccccccccccCCCCC-eeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDE-LLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~-~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.||...-.++. ...--.|+..||..|+...+... .....|+.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-INGVRCPFCSKI 65 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-SSCBCCTTTCCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-CCCcCCCCCCCc
Confidence 34577999998643322 12223699999999997554332 124689999875
No 135
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=43.45 E-value=17 Score=26.06 Aligned_cols=46 Identities=22% Similarity=0.307 Sum_probs=25.3
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
.....|.+|+...|+..- ..-.-..-+.+....|+ +|.|+.|...+
T Consensus 25 m~~y~C~vCGyvYD~~~G-------dp~~gI~pGT~fedlPd-dW~CPvCga~K 70 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALG-------WPEDGIAAGTRWDDIPD-DWSCPDCGAAK 70 (81)
T ss_dssp CCEEEETTTCCEEETTTC-------BTTTTBCTTCCTTTSCT-TCCCTTTCCCG
T ss_pred cceEEeCCCCEEEcCCcC-------CcccCcCCCCChhHCCC-CCcCCCCCCCH
Confidence 456778888875332110 00112233334455665 59999998864
No 136
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=42.81 E-value=9.4 Score=26.35 Aligned_cols=51 Identities=22% Similarity=0.489 Sum_probs=34.0
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+-.+...|.||...-.+ -+.-..|+..||..|+...+... +...|+.|...
T Consensus 11 ~~~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~--~~~~CP~Cr~~ 61 (74)
T 2yur_A 11 PIPDELLCLICKDIMTD--AVVIPCCGNSYCDECIRTALLES--DEHTCPTCHQN 61 (74)
T ss_dssp CSCGGGSCSSSCCCCTT--CEECSSSCCEECTTHHHHHHHHS--SSSCCSSSCCS
T ss_pred cCCCCCCCcCCChHHhC--CeEcCCCCCHHHHHHHHHHHHhc--CCCcCCCCCCc
Confidence 44467889999875322 23334489999999997554322 23579999885
No 137
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=41.81 E-value=3 Score=30.99 Aligned_cols=47 Identities=28% Similarity=0.522 Sum_probs=34.7
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...- ..-+.|-.|+..||..|+...+... ...|+.|...
T Consensus 21 ~~~~C~IC~~~~--~~p~~~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~~ 67 (100)
T 3lrq_A 21 EVFRCFICMEKL--RDARLCPHCSKLCCFSCIRRWLTEQ---RAQCPHCRAP 67 (100)
T ss_dssp HHTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHHHT---CSBCTTTCCB
T ss_pred CCCCCccCCccc--cCccccCCCCChhhHHHHHHHHHHC---cCCCCCCCCc
Confidence 456799999763 3456678999999999998554432 1589999875
No 138
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=41.76 E-value=11 Score=35.80 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=21.6
Q ss_pred CCceeEEEccCCCCCCeEEEcccee
Q 019353 217 KEGFTVQADRFIKDLTIITEYVGDV 241 (342)
Q Consensus 217 ~~G~Gv~a~~~i~~g~~I~ey~Gev 241 (342)
..|+||+|+++|++|+.|+...-.+
T Consensus 31 ~~GrGl~A~~~I~~ge~ll~IP~~~ 55 (440)
T 2h21_A 31 TEGLGLVALKDISRNDVILQVPKRL 55 (440)
T ss_dssp TTEEEEEESSCBCTTEEEEEEEGGG
T ss_pred CCCCEEEEcccCCCCCEEEEeChhH
Confidence 3699999999999999998776654
No 139
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=41.71 E-value=15 Score=27.75 Aligned_cols=16 Identities=38% Similarity=0.470 Sum_probs=12.7
Q ss_pred EEEcCCCCCCCeEEEe
Q 019353 313 LVANRDIAKGERLYYD 328 (342)
Q Consensus 313 l~A~rdI~~GEELt~d 328 (342)
.+|++||++||+|+++
T Consensus 34 aVAl~~L~aG~~v~~~ 49 (105)
T 3k3s_A 34 AVALADLAEGTEVSVD 49 (105)
T ss_dssp EEESSCBCTTCEEEET
T ss_pred EEecCccCCCCEEeeC
Confidence 4788999999988753
No 140
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=40.48 E-value=5.3 Score=26.95 Aligned_cols=46 Identities=20% Similarity=0.408 Sum_probs=31.1
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
....|.||...-.+ ....-.|+..||..|+...+.. ...|+.|...
T Consensus 4 ~~~~C~IC~~~~~~--~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 49 (68)
T 1chc_A 4 VAERCPICLEDPSN--YSMALPCLHAFCYVCITRWIRQ----NPTCPLCKVP 49 (68)
T ss_dssp CCCCCSSCCSCCCS--CEEETTTTEEESTTHHHHHHHH----SCSTTTTCCC
T ss_pred CCCCCeeCCccccC--CcEecCCCCeeHHHHHHHHHhC----cCcCcCCChh
Confidence 45679999876322 2234569999999999754322 2479999764
No 141
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=39.99 E-value=12 Score=21.96 Aligned_cols=14 Identities=29% Similarity=0.919 Sum_probs=10.7
Q ss_pred CCCCccCccCccCC
Q 019353 65 PKGSWFCPSCSHHK 78 (342)
Q Consensus 65 p~~~w~C~~C~~~~ 78 (342)
..++|.|+.|....
T Consensus 3 ~~gDW~C~~C~~~N 16 (33)
T 2k1p_A 3 SANDWQCKTCSNVN 16 (33)
T ss_dssp SSSSCBCSSSCCBC
T ss_pred CCCCcccCCCCCcc
Confidence 35789999997653
No 142
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=37.41 E-value=19 Score=22.86 Aligned_cols=16 Identities=38% Similarity=1.084 Sum_probs=11.5
Q ss_pred CCCCCCCccCccCccCC
Q 019353 62 VSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 62 ~~~p~~~w~C~~C~~~~ 78 (342)
...|+ +|.|+.|...+
T Consensus 25 ~~lP~-dw~CP~Cg~~k 40 (46)
T 6rxn_A 25 DQLPD-DWCCPVCGVSK 40 (46)
T ss_dssp GGSCT-TCBCTTTCCBG
T ss_pred hhCCC-CCcCcCCCCcH
Confidence 34554 59999998753
No 143
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=37.16 E-value=9.8 Score=26.58 Aligned_cols=50 Identities=20% Similarity=0.353 Sum_probs=32.2
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCC--CCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSV--PKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~--p~~~w~C~~C~~~ 77 (342)
.+...|.||...-.+..++ .|+..||..|+...+... ..+...|+.|...
T Consensus 17 ~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSA---DCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp CTTTSCTTTCSCCSSCEEC---TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred ccCCCCcCCChhhCcceeC---CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 3467899998763322222 488889999987433221 1235789999875
No 144
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=36.87 E-value=21 Score=23.25 Aligned_cols=16 Identities=38% Similarity=1.113 Sum_probs=11.7
Q ss_pred CCCCCCCccCccCccCC
Q 019353 62 VSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 62 ~~~p~~~w~C~~C~~~~ 78 (342)
...|+ +|.|+.|...+
T Consensus 30 ~~lP~-dw~CP~Cg~~K 45 (52)
T 1yk4_A 30 EDLPD-DWVCPLCGAPK 45 (52)
T ss_dssp GGSCT-TCBCTTTCCBG
T ss_pred hHCCC-CCcCCCCCCCH
Confidence 44555 59999998864
No 145
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.98 E-value=5 Score=28.27 Aligned_cols=48 Identities=19% Similarity=0.305 Sum_probs=32.5
Q ss_pred CcccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 23 PDDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 23 d~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+..+...|.||...-.+ .++ -.|+..||..|+...+.. ...|+.|...
T Consensus 11 ~~~~~~~C~IC~~~~~~-p~~--~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 58 (81)
T 2csy_A 11 EEEIPFRCFICRQAFQN-PVV--TKCRHYFCESCALEHFRA----TPRCYICDQP 58 (81)
T ss_dssp CCCCCSBCSSSCSBCCS-EEE--CTTSCEEEHHHHHHHHHH----CSBCSSSCCB
T ss_pred cCCCCCCCcCCCchhcC-eeE--ccCCCHhHHHHHHHHHHC----CCcCCCcCcc
Confidence 33456789999876322 222 479999999998755432 3579999875
No 146
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=35.80 E-value=17 Score=25.23 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=17.6
Q ss_pred cccccccccc---CCCCCeeecCCCCcccc
Q 019353 27 DSRCEKCGSG---DFPDELLLCDKCDKGFH 53 (342)
Q Consensus 27 ~~~C~iC~~~---~~~g~~i~Cd~C~~~~H 53 (342)
...|.+|+.. +..+..+.|..|+.+|=
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YP 37 (69)
T 2pk7_A 8 ILACPICKGPLKLSADKTELISKGAGLAYP 37 (69)
T ss_dssp TCCCTTTCCCCEECTTSSEEEETTTTEEEE
T ss_pred heeCCCCCCcCeEeCCCCEEEcCCCCcEec
Confidence 4568888864 23345666888877774
No 147
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=35.75 E-value=8.3 Score=22.14 Aligned_cols=13 Identities=31% Similarity=1.048 Sum_probs=11.1
Q ss_pred CCCccCccCccCC
Q 019353 66 KGSWFCPSCSHHK 78 (342)
Q Consensus 66 ~~~w~C~~C~~~~ 78 (342)
+++|.|..|.+.+
T Consensus 16 egdwcchkcvpeg 28 (36)
T 4b2u_A 16 EGDWCCHKCVPEG 28 (36)
T ss_dssp GCCSSSSEEEEET
T ss_pred ccCeeeecccccC
Confidence 5789999999865
No 148
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=35.32 E-value=5.6 Score=31.38 Aligned_cols=44 Identities=20% Similarity=0.548 Sum_probs=29.9
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
...|.||...-.+.-++ .|+..||..|+...+.. .-.||.|...
T Consensus 53 ~~~C~iC~~~~~~~~~~---~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 96 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVTL---NCAHSFCSYCINEWMKR----KIECPICRKD 96 (138)
T ss_dssp HSBCTTTCSBCSSEEEE---TTSCEEEHHHHHHHTTT----CSBCTTTCCB
T ss_pred cCCCcccCcccCCceEC---CCCCCccHHHHHHHHHc----CCcCCCCCCc
Confidence 35699998763332222 58889999998755433 2469999764
No 149
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=35.17 E-value=16 Score=25.43 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=18.8
Q ss_pred cccccccccc---CCCCCeeecCCCCccccc
Q 019353 27 DSRCEKCGSG---DFPDELLLCDKCDKGFHL 54 (342)
Q Consensus 27 ~~~C~iC~~~---~~~g~~i~Cd~C~~~~H~ 54 (342)
...|.+|+.. +..+..+.|..|+.+|=+
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI 38 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLAFPV 38 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEEEEE
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCceecC
Confidence 4568888875 233456678888888843
No 150
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=34.74 E-value=17 Score=25.21 Aligned_cols=27 Identities=22% Similarity=0.383 Sum_probs=17.5
Q ss_pred cccccccccc---CCCCCeeecCCCCcccc
Q 019353 27 DSRCEKCGSG---DFPDELLLCDKCDKGFH 53 (342)
Q Consensus 27 ~~~C~iC~~~---~~~g~~i~Cd~C~~~~H 53 (342)
...|.+|+.. +..+..+.|..|+.+|=
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICKGDRLAFP 37 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEETTTTEEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEec
Confidence 4568888864 22345566888877773
No 151
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=34.55 E-value=17 Score=25.11 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=19.4
Q ss_pred cccccccccc---CCCCCeeecCCCCccccc
Q 019353 27 DSRCEKCGSG---DFPDELLLCDKCDKGFHL 54 (342)
Q Consensus 27 ~~~C~iC~~~---~~~g~~i~Cd~C~~~~H~ 54 (342)
...|.+|+.. +..+..+.|..|+.+|=+
T Consensus 10 iL~CP~ck~~L~~~~~~g~LvC~~c~~~YPI 40 (67)
T 2jny_A 10 VLACPKDKGPLRYLESEQLLVNERLNLAYRI 40 (67)
T ss_dssp CCBCTTTCCBCEEETTTTEEEETTTTEEEEE
T ss_pred HhCCCCCCCcCeEeCCCCEEEcCCCCccccC
Confidence 4578888875 233456678889888843
No 152
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=34.46 E-value=25 Score=23.11 Aligned_cols=16 Identities=38% Similarity=1.113 Sum_probs=11.7
Q ss_pred CCCCCCCccCccCccCC
Q 019353 62 VSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 62 ~~~p~~~w~C~~C~~~~ 78 (342)
...|+ +|.|+.|-..+
T Consensus 31 e~lP~-dw~CP~Cg~~K 46 (54)
T 4rxn_A 31 KDIPD-DWVCPLCGVGK 46 (54)
T ss_dssp GGSCT-TCBCTTTCCBG
T ss_pred hHCCC-CCcCcCCCCcH
Confidence 34554 59999998864
No 153
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=34.45 E-value=25 Score=24.47 Aligned_cols=18 Identities=33% Similarity=0.866 Sum_probs=12.6
Q ss_pred CCCCCCCCCccCccCccCC
Q 019353 60 ILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 60 ~~~~~p~~~w~C~~C~~~~ 78 (342)
+....|+ +|.|+.|...+
T Consensus 33 ~f~~lPd-dw~CP~Cga~K 50 (70)
T 1dx8_A 33 PFVDLSD-SFMCPACRSPK 50 (70)
T ss_dssp CGGGSCT-TCBCTTTCCBG
T ss_pred chhhCCC-CCcCCCCCCCH
Confidence 3344555 59999998864
No 154
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=34.03 E-value=17 Score=25.15 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=18.3
Q ss_pred cccccccccc---CCCCCeeecCCCCccccc
Q 019353 27 DSRCEKCGSG---DFPDELLLCDKCDKGFHL 54 (342)
Q Consensus 27 ~~~C~iC~~~---~~~g~~i~Cd~C~~~~H~ 54 (342)
...|.+|+.. +.....+.|..|+.+|=+
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI 38 (68)
T 2jr6_A 8 ILVCPVTKGRLEYHQDKQELWSRQAKLAYPI 38 (68)
T ss_dssp CCBCSSSCCBCEEETTTTEEEETTTTEEEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEecC
Confidence 4568888864 233456678888888743
No 155
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=33.68 E-value=17 Score=28.78 Aligned_cols=53 Identities=25% Similarity=0.597 Sum_probs=36.6
Q ss_pred ccccccccccccC--CCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGD--FPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~--~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
++...|.+|+.+- ..+.-..|..|..-.=..|-.-.........|.|..|...
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 4567899999863 2344567888887777777664322233447999999885
No 156
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=32.89 E-value=25 Score=23.15 Aligned_cols=16 Identities=38% Similarity=1.144 Sum_probs=11.8
Q ss_pred CCCCCCCccCccCccCC
Q 019353 62 VSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 62 ~~~p~~~w~C~~C~~~~ 78 (342)
...|+ +|.|+.|...+
T Consensus 31 ~~lP~-dw~CP~Cga~K 46 (55)
T 2v3b_B 31 EDIPA-DWVCPDCGVGK 46 (55)
T ss_dssp GGSCT-TCCCTTTCCCG
T ss_pred hHCCC-CCcCCCCCCCH
Confidence 44554 59999998864
No 157
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=32.08 E-value=4.7 Score=31.10 Aligned_cols=47 Identities=19% Similarity=0.390 Sum_probs=31.9
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
+...|.||...-.+..++ .|+..||..|+...+.. ....|+.|...-
T Consensus 51 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITT---VCQHNVCKDCLDRSFRA---QVFSCPACRYDL 97 (124)
T ss_dssp HHTBCTTTSSBCSSEEEC---TTSCEEEHHHHHHHHHT---TCCBCTTTCCBC
T ss_pred cCCCCCcCChHHcCcEEe---eCCCcccHHHHHHHHhH---CcCCCCCCCccC
Confidence 456799998763222222 79999999999755431 235899998753
No 158
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=31.52 E-value=16 Score=26.61 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=27.4
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPI 60 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~ 60 (342)
..+|.+|+.. ..+..=.|..|+-..|+.|...+
T Consensus 47 ~~~C~~C~~~-~~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 47 VYTCDKCEEE-GTIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp SCCCTTTSCC-CCSCEEECTTTCCCCCHHHHHCS
T ss_pred CeEeCCCCCc-CCCcEEEcCCCCCeEcHHhcCCC
Confidence 3679999986 35788899999999999998754
No 159
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.73 E-value=51 Score=23.02 Aligned_cols=31 Identities=29% Similarity=0.450 Sum_probs=21.4
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLR 58 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~ 58 (342)
....|..|+..-.+++.+. .-++.||..|+.
T Consensus 14 ~~~~C~~C~~~I~~~e~v~--a~~~~wH~~CF~ 44 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLC--VNGHFFHRSCFR 44 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTTCB
T ss_pred CCCCCcccCCCcccceEEE--ECCCeeCCCcCE
Confidence 3467999998865555554 456788887753
No 160
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=30.70 E-value=21 Score=27.18 Aligned_cols=20 Identities=20% Similarity=0.199 Sum_probs=16.5
Q ss_pred EEEEEEcCCCCCCCeEEEecC
Q 019353 310 RVLLVANRDIAKGERLYYDYN 330 (342)
Q Consensus 310 ~i~l~A~rdI~~GEELt~dY~ 330 (342)
-.++||+++|++||-|. .|-
T Consensus 15 G~GvfA~~~I~~G~~I~-ey~ 34 (119)
T 1n3j_A 15 GYGVFARKSFEKGELVE-ECL 34 (119)
T ss_dssp CCEEEECCCBCSCEEEC-CCC
T ss_pred eeEEEECCcCCCCCEEE-Eee
Confidence 37899999999999885 454
No 161
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=30.35 E-value=13 Score=21.58 Aligned_cols=12 Identities=25% Similarity=0.949 Sum_probs=9.6
Q ss_pred CCCccCccCccC
Q 019353 66 KGSWFCPSCSHH 77 (342)
Q Consensus 66 ~~~w~C~~C~~~ 77 (342)
.++|.|+.|...
T Consensus 3 ~gDW~C~~C~~~ 14 (32)
T 2lk0_A 3 FEDWLCNKCCLN 14 (32)
T ss_dssp CSEEECTTTCCE
T ss_pred CCCCCcCcCcCC
Confidence 378999999764
No 162
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.26 E-value=9.9 Score=28.34 Aligned_cols=47 Identities=30% Similarity=0.492 Sum_probs=31.2
Q ss_pred ccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 27 DSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 27 ~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
...|.||...-.+..+ -.|+..||..|+...+... .+...|+.|...
T Consensus 21 ~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 21 ILECPICLELIKEPVS---TKCDHIFCKFCMLKLLNQK-KGPSQCPLCKND 67 (112)
T ss_dssp HTSCSSSCCCCSSCCB---CTTSCCCCSHHHHHHHHSS-SSSCCCTTTSCC
T ss_pred CCCCcccChhhcCeEE---CCCCCHHHHHHHHHHHHhC-CCCCCCcCCCCc
Confidence 4579999876332222 2689999999987544332 234689999774
No 163
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.54 E-value=15 Score=25.07 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=32.5
Q ss_pred cccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 24 DDDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 24 ~~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
-.+...|.||...-.+ -+.-..|+..||..|+...+.. ...|+.|...
T Consensus 12 ~~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 59 (72)
T 2djb_A 12 LTPYILCSICKGYLID--ATTITECLHTFCKSCIVRHFYY----SNRCPKCNIV 59 (72)
T ss_dssp CCGGGSCTTTSSCCSS--CEECSSSCCEECHHHHHHHHHH----CSSCTTTCCC
T ss_pred cCCCCCCCCCChHHHC--cCEECCCCCHHHHHHHHHHHHc----CCcCCCcCcc
Confidence 3456789999875322 3334578999999998754322 2479999874
No 164
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=28.81 E-value=29 Score=28.04 Aligned_cols=50 Identities=16% Similarity=0.444 Sum_probs=35.2
Q ss_pred cccccccccccc--CCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSG--DFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~--~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.+|+.+ --.+.-..|..|..-.=..|-. ...+...|.|..|...
T Consensus 66 ~~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~---~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 66 LNETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH---AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE---CCSSSSSCEEHHHHHH
T ss_pred CCCccchhhcCccccccCCCCcCCCCCchhhccccc---ccCCCCcEeeHHHHHH
Confidence 467889999985 2335566788887777677764 2234567999999885
No 165
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=27.73 E-value=12 Score=25.84 Aligned_cols=47 Identities=13% Similarity=0.183 Sum_probs=32.4
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.||...-.+ .++. .|+..|+..|+...+.. +...|+.|...
T Consensus 6 ~~~~~C~IC~~~~~~-Pv~~--~CgH~fc~~Ci~~~~~~---~~~~CP~C~~~ 52 (78)
T 1t1h_A 6 PEYFRCPISLELMKD-PVIV--STGQTYERSSIQKWLDA---GHKTCPKSQET 52 (78)
T ss_dssp SSSSSCTTTSCCCSS-EEEE--TTTEEEEHHHHHHHHTT---TCCBCTTTCCB
T ss_pred cccCCCCCccccccC-CEEc--CCCCeecHHHHHHHHHH---CcCCCCCCcCC
Confidence 356789999975322 2222 69999999998765542 34689999874
No 166
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=26.63 E-value=2.9 Score=27.77 Aligned_cols=47 Identities=28% Similarity=0.588 Sum_probs=32.1
Q ss_pred ccccccccccCC----CCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 27 DSRCEKCGSGDF----PDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 27 ~~~C~iC~~~~~----~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
...|.||...-. .+..+..-.|+..||..|+...+.. ...|+.|...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc----CCCCCCCCcc
Confidence 456899987521 2344456689999999999854432 2479999774
No 167
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=26.26 E-value=17 Score=27.06 Aligned_cols=47 Identities=23% Similarity=0.451 Sum_probs=33.0
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.||...- ..-+....|+..||..|+...+.. ...|+.|...
T Consensus 13 ~~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 59 (108)
T 2ckl_A 13 NPHLMCVLCGGYF--IDATTIIECLHSFCKTCIVRYLET----SKYCPICDVQ 59 (108)
T ss_dssp GGGTBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHTS----CSBCTTTCCB
T ss_pred CCcCCCccCChHH--hCcCEeCCCCChhhHHHHHHHHHh----CCcCcCCCcc
Confidence 3567899998753 223444579999999998755443 2579999875
No 168
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=25.18 E-value=8.5 Score=28.21 Aligned_cols=47 Identities=26% Similarity=0.526 Sum_probs=32.4
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.||...-.+ -+..-.|+..||..|+...+.. ...|+.|...
T Consensus 20 ~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 66 (99)
T 2y43_A 20 DDLLRCGICFEYFNI--AMIIPQCSHNYCSLCIRKFLSY----KTQCPTCCVT 66 (99)
T ss_dssp HHHTBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHTT----CCBCTTTCCB
T ss_pred CCCCCcccCChhhCC--cCEECCCCCHhhHHHHHHHHHC----CCCCCCCCCc
Confidence 346789999876322 2333579999999998755442 2579999875
No 169
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.89 E-value=47 Score=24.90 Aligned_cols=44 Identities=20% Similarity=0.344 Sum_probs=29.6
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...-.+-.+ -..|+..|+..|+...+. ..|+.|...
T Consensus 21 ~~~~C~IC~~~~~~pv~--~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~ 64 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVC--LGGCEHIFCSNCVSDCIG------TGCPVCYTP 64 (117)
T ss_dssp HTTSCSSSCSCCSSCBC--CCSSSCCBCTTTGGGGTT------TBCSSSCCB
T ss_pred hCCCCCCCChHhhCccE--eCCCCCHHHHHHHHHHhc------CCCcCCCCc
Confidence 45779999876322222 226888899999875433 469999875
No 170
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=24.14 E-value=43 Score=21.15 Aligned_cols=31 Identities=23% Similarity=0.500 Sum_probs=25.0
Q ss_pred cccccccccccCCCCCeeecCCCCcccccCccC
Q 019353 26 DDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLR 58 (342)
Q Consensus 26 ~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~ 58 (342)
....|..|+..-- .-+.|..|....|..|..
T Consensus 13 ~pt~C~~C~~~l~--qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 13 KLAFCDICQKFLL--NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp SCEECTTSSSEEC--SEEECTTTTCCBCSTTSS
T ss_pred CCcCCCCcccccc--cCCEeCCCCCeEChhHHh
Confidence 3567889987532 677899999999999987
No 171
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=23.76 E-value=13 Score=26.61 Aligned_cols=49 Identities=20% Similarity=0.464 Sum_probs=31.7
Q ss_pred ccccccccccccCCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 25 DDDSRCEKCGSGDFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 25 ~~~~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
.+...|.||...-.+-.+ -..|+..|+..|+...+... +...|+.|...
T Consensus 11 ~~~~~C~IC~~~~~~p~~--~~~CgH~fC~~Ci~~~~~~~--~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVV--IPCCGNSYCDECIRTALLES--DEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSSCEE--CTTTCCEECHHHHHHHHHHC--TTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcCceE--CCCCCCHHHHHHHHHHHHhc--CCCcCcCCCCc
Confidence 456789999975322222 23388889999987543221 23689999875
No 172
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=22.40 E-value=13 Score=27.13 Aligned_cols=52 Identities=25% Similarity=0.510 Sum_probs=36.6
Q ss_pred ccccccccccccc----CCCCCeeecCCCCcccccCccCCCCCCCCCCCccCccCccCC
Q 019353 24 DDDDSRCEKCGSG----DFPDELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHHK 78 (342)
Q Consensus 24 ~~~~~~C~iC~~~----~~~g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~~ 78 (342)
..+..+|.||+.. .+....+-|.-|.-..-..|+. -++.++.-.|+.|..+-
T Consensus 13 ~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyE---YErkeG~q~CpqCktrY 68 (93)
T 1weo_A 13 NLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYE---YERREGTQNCPQCKTRY 68 (93)
T ss_dssp CCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHH---HHHHTSCSSCTTTCCCC
T ss_pred ccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHH---HHHhccCccccccCCcc
Confidence 3356789999985 2334677899897766667776 33445677899998863
No 173
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=22.39 E-value=46 Score=20.99 Aligned_cols=26 Identities=27% Similarity=0.580 Sum_probs=15.9
Q ss_pred ccccccccc----CCCCCeeecCCCCcccc
Q 019353 28 SRCEKCGSG----DFPDELLLCDKCDKGFH 53 (342)
Q Consensus 28 ~~C~iC~~~----~~~g~~i~Cd~C~~~~H 53 (342)
..|..|+.. +.....+.|..|+..+-
T Consensus 6 ~~CP~C~~~~l~~d~~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYVIE 35 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCBCC
T ss_pred EeCcCCCCcceEEcCCCCeEECcccCCccc
Confidence 458888762 22334567888877664
No 174
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=22.28 E-value=28 Score=32.21 Aligned_cols=18 Identities=39% Similarity=0.403 Sum_probs=15.5
Q ss_pred EEEEEcCCCCCCCeEEEe
Q 019353 311 VLLVANRDIAKGERLYYD 328 (342)
Q Consensus 311 i~l~A~rdI~~GEELt~d 328 (342)
=.|||.|||++||.||-+
T Consensus 280 rSlva~~di~~Ge~lt~~ 297 (350)
T 3g8r_A 280 RGVFATRPVAAGEALTAD 297 (350)
T ss_dssp CEEEESSCBCTTCBCBTT
T ss_pred eEEEEccccCCCCCccHH
Confidence 368999999999999853
No 175
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=22.25 E-value=44 Score=25.21 Aligned_cols=17 Identities=18% Similarity=-0.093 Sum_probs=14.9
Q ss_pred EEEccCCCCCCeEEEcc
Q 019353 222 VQADRFIKDLTIITEYV 238 (342)
Q Consensus 222 v~a~~~i~~g~~I~ey~ 238 (342)
=+|.++|++|+.|..|-
T Consensus 64 KiAl~dI~~Ge~ViKYG 80 (105)
T 3k3s_A 64 KFALTDIAKGANVIKYG 80 (105)
T ss_dssp EEESSCBCTTCEEEETT
T ss_pred EEEEcccCCCCeEEECC
Confidence 58899999999999993
No 176
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=22.08 E-value=50 Score=26.45 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=19.7
Q ss_pred CCcEEEEEEECCeEEEEEEEcCCCCCCCeEE
Q 019353 296 QNLKCVRYNVNGECRVLLVANRDIAKGERLY 326 (342)
Q Consensus 296 pN~~~~~~~~~~~~~i~l~A~rdI~~GEELt 326 (342)
+.+++... .+ .-++|||+++|++|+=|.
T Consensus 30 ~~l~v~~~--~~-kG~Gl~A~~~I~~G~~I~ 57 (166)
T 3f9x_A 30 EGMKIDLI--DG-KGRGVIATKQFSRGDFVV 57 (166)
T ss_dssp TTEEEEEE--TT-TEEEEEESSCBCTTCEEE
T ss_pred cCeEEEEC--CC-ceeEEEECCCcCCCCEEE
Confidence 55555433 33 347899999999999764
No 177
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=21.24 E-value=12 Score=28.60 Aligned_cols=48 Identities=27% Similarity=0.571 Sum_probs=33.6
Q ss_pred cccccccccccC-CC---CCeeecCCCCcccccCccCCCCCCCCCCCccCccCccC
Q 019353 26 DDSRCEKCGSGD-FP---DELLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSHH 77 (342)
Q Consensus 26 ~~~~C~iC~~~~-~~---g~~i~Cd~C~~~~H~~C~~p~~~~~p~~~w~C~~C~~~ 77 (342)
+...|.||...- ++ +..+.--.|+..||..|+...+... -.|+.|...
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 57 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKK 57 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC----SBCTTTCCB
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC----CCCCCCCCc
Confidence 456799998752 22 3444556899999999998655432 389999875
No 178
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=20.92 E-value=61 Score=22.36 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=20.4
Q ss_pred CCeeecC--CCCcccccCccCCCCCCCCCCCccCcc
Q 019353 40 DELLLCD--KCDKGFHLFCLRPILVSVPKGSWFCPS 73 (342)
Q Consensus 40 g~~i~Cd--~C~~~~H~~C~~p~~~~~p~~~w~C~~ 73 (342)
..-|+|| .|.+|=.+.=-. .....| ..|+|..
T Consensus 16 ~~WVQCd~p~C~KWR~LP~~~-~~~~lp-d~W~C~m 49 (69)
T 2e61_A 16 LVWVQCSFPNCGKWRRLCGNI-DPSVLP-DNWSCDQ 49 (69)
T ss_dssp CCEEECSSTTTCCEEECCSSC-CTTTSC-TTCCGGG
T ss_pred CeEEEeCccccCcccCCcccc-ccccCC-CcCEeCC
Confidence 6889999 999997652211 112334 4699963
No 179
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=20.83 E-value=38 Score=19.21 Aligned_cols=28 Identities=36% Similarity=0.804 Sum_probs=16.7
Q ss_pred cccccccccCCCCCeeecCCCCcccccCcc
Q 019353 28 SRCEKCGSGDFPDELLLCDKCDKGFHLFCL 57 (342)
Q Consensus 28 ~~C~iC~~~~~~g~~i~Cd~C~~~~H~~C~ 57 (342)
..|..|+..--+.+.+..+ +..||..|+
T Consensus 4 ~~C~~C~k~Vy~~Ek~~~~--g~~~Hk~CF 31 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVNCL--DKFWHKACF 31 (31)
T ss_dssp CBCSSSCSBCCGGGCCCSS--SSCCCGGGC
T ss_pred CcCCccCCEEecceeEEEC--CeEecccCC
Confidence 3578888764333444444 467777774
No 180
>3laz_A D-galactarate dehydratase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.92A {Escherichia coli}
Probab=20.16 E-value=51 Score=24.53 Aligned_cols=20 Identities=30% Similarity=0.091 Sum_probs=16.6
Q ss_pred EEEccCCCCCCeEEEccceee
Q 019353 222 VQADRFIKDLTIITEYVGDVD 242 (342)
Q Consensus 222 v~a~~~i~~g~~I~ey~Gev~ 242 (342)
=+|.++|++|+.|..| |+++
T Consensus 57 KiAl~dI~~Ge~ViKY-G~~I 76 (99)
T 3laz_A 57 KVALLDIPANGEIIRY-GEVI 76 (99)
T ss_dssp EEESSCBCTTCEEEET-TEEE
T ss_pred EEEEcccCCCCeEEEC-CcCh
Confidence 5899999999999999 4443
Done!