BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019366
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZSZ8|FIP37_ARATH FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana
GN=FIP37 PE=1 SV=1
Length = 330
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/285 (71%), Positives = 242/285 (84%), Gaps = 7/285 (2%)
Query: 10 DDDFGGDFSANHNSRRSGSKRSFGDIEDDEDDIFGSRKANSKVEETAPGVATGMILSLRE 69
DDDFGGD SA + +R SG++RSFGD+EDDEDDIFGS APGV TGMILSLR
Sbjct: 7 DDDFGGDDSAANATRASGNRRSFGDLEDDEDDIFGSTT-------VAPGVRTGMILSLRG 59
Query: 70 SLQNCKDTLATCQLELEAAKSEIQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEM 129
SL+NCKD LA+CQ ELE+AK+EIQKW S+FQNE F+P G SPEPR +I+Y+Q LKSSE+
Sbjct: 60 SLKNCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSPEPRFLIDYIQNLKSSEKS 119
Query: 130 LKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEF 189
LKEQLE AK+KEA+ IV +AKREQE+AELKSAVRDLK+QLKP MQARRLLLDPAIHEEF
Sbjct: 120 LKEQLEIAKRKEASCIVQYAKREQEMAELKSAVRDLKSQLKPASMQARRLLLDPAIHEEF 179
Query: 190 RRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETH 249
RLKNLVEEKDKK+KEL++NIAAV+FT SK GK LMAKC+TLQEEN+EIG Q EG+ H
Sbjct: 180 SRLKNLVEEKDKKIKELQDNIAAVTFTPQSKNGKMLMAKCRTLQEENEEIGHQAAEGKIH 239
Query: 250 QLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLMLR 294
+L++KLA+QKS NAEL+SQFE LYKHM+ LT+DVERSNE V++L+
Sbjct: 240 ELAIKLAMQKSQNAELRSQFEGLYKHMEELTNDVERSNETVIILQ 284
>sp|Q7SXL7|FL2D_DANRE Pre-mRNA-splicing regulator WTAP OS=Danio rerio GN=wtap PE=2 SV=1
Length = 423
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 115/190 (60%)
Query: 118 NYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQAR 177
N + LK SEE LK+Q +++ ++E ++ A +EQE+ E + ++ LK +P Q R
Sbjct: 50 NDVTGLKESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLR 109
Query: 178 RLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEEND 237
++DPAI+ F ++K +E+ K+++ + ++A FT +S+ GK LMAKC+ L +EN
Sbjct: 110 SSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFTPDSQTGKKLMAKCRMLIQENQ 169
Query: 238 EIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLMLREKL 297
E+GRQ +G QL +LALQK + ELKS + L + L ++VE +L+L+++L
Sbjct: 170 ELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQL 229
Query: 298 EENDHELEKL 307
E +L ++
Sbjct: 230 RETRQQLSQM 239
>sp|Q9ER69|FL2D_MOUSE Pre-mRNA-splicing regulator WTAP OS=Mus musculus GN=Wtap PE=2 SV=3
Length = 396
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 113/182 (62%)
Query: 118 NYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQAR 177
N + L+ SEE LK+Q +++ ++E ++ A +EQE+ E + ++ LK +P + Q R
Sbjct: 50 NDVTGLRESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLR 109
Query: 178 RLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEEND 237
++DPAI+ F ++K +E+ K+++ + ++A FT +S+ GK LMAKC+ L +EN
Sbjct: 110 STMVDPAINLFFLKMKGELEQTKDKLEQAQNELSAWKFTPDSQTGKKLMAKCRMLIQENQ 169
Query: 238 EIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLMLREKL 297
E+GRQ +G QL +LALQK + ELKS + L + L ++VE +L+L+++L
Sbjct: 170 ELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQL 229
Query: 298 EE 299
+E
Sbjct: 230 KE 231
>sp|Q15007|FL2D_HUMAN Pre-mRNA-splicing regulator WTAP OS=Homo sapiens GN=WTAP PE=1 SV=2
Length = 396
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 113/182 (62%)
Query: 118 NYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQAR 177
N + L+ SEE LK+Q +++ ++E ++ A +EQE+ E + ++ LK +P + Q R
Sbjct: 50 NDVTGLRESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLR 109
Query: 178 RLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEEND 237
++DPAI+ F ++K +E+ K+++ + ++A FT +S+ GK LMAKC+ L +EN
Sbjct: 110 STMVDPAINLFFLKMKGELEQTKDKLEQAQNELSAWKFTPDSQTGKKLMAKCRMLIQENQ 169
Query: 238 EIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLMLREKL 297
E+GRQ +G QL +LALQK + ELKS + L + L ++VE +L+L+++L
Sbjct: 170 ELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQL 229
Query: 298 EE 299
+E
Sbjct: 230 KE 231
>sp|Q4KLT6|FL2D_XENLA Pre-mRNA-splicing regulator WTAP OS=Xenopus laevis GN=wtap PE=2
SV=1
Length = 393
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 3/209 (1%)
Query: 92 IQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKR 151
+Q+W Q E ++ + L N + L+ SEE LK+Q +++ ++E ++ A +
Sbjct: 27 LQRWK---QYEAYVQALENKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLATK 83
Query: 152 EQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIA 211
EQE+ E + ++ LK +P + Q R ++DPAI+ F ++K +E+ K+++ + ++
Sbjct: 84 EQEMQECTNQIQHLKQVQQPSVAQLRATMVDPAINLFFIKMKAELEQTKDKLEQAQNELS 143
Query: 212 AVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKSQFEA 271
A FT +S+ GK LMAKC+ L +EN E+GRQ +G QL +LALQK + ELKS +
Sbjct: 144 AWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDE 203
Query: 272 LYKHMDGLTDDVERSNEMVLMLREKLEEN 300
L + L ++VE +L+L+++L+++
Sbjct: 204 LNDFIIQLDEEVEGMQSTILVLQQQLKDS 232
>sp|Q6P4K5|FL2D_XENTR Pre-mRNA-splicing regulator WTAP OS=Xenopus tropicalis GN=wtap PE=2
SV=1
Length = 393
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 92 IQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKR 151
+Q+W Q E ++ + L N + L+ SEE LK+Q + + ++E ++ A +
Sbjct: 27 LQRWK---QFEAYVQALENKYTDLNSNDVTGLRESEEKLKQQQQDSARRENILVMRLATK 83
Query: 152 EQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIA 211
EQE+ E + ++ LK +P + Q R ++DPAI+ F ++K +E+ K+++ + ++
Sbjct: 84 EQEMQECTTQIQHLKQVQQPSVAQLRATMVDPAINLFFIKMKAELEQTKDKLEQAQNELS 143
Query: 212 AVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKSQFEA 271
A FT +S+ GK LMAKC+ L +EN E+GRQ +G QL +LALQK + ELKS +
Sbjct: 144 AWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDE 203
Query: 272 LYKHMDGLTDDVERSNEMVLMLREKLEEN 300
L + L ++VE +L+L+++L+++
Sbjct: 204 LNDFIIQLDEEVEGMQSTILVLQQQLKDS 232
>sp|Q9Y091|FL2D_DROME Pre-mRNA-splicing regulator female-lethal(2)D OS=Drosophila
melanogaster GN=fl(2)d PE=1 SV=2
Length = 536
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Query: 114 RLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPL 173
RL+ + ++ LK + + +Q A+++E + A +EQE + S + + KAQ P
Sbjct: 109 RLLEDEIENLKLEQVRMAQQCADAQRREKILMRRLANKEQEFQDYVSQIAEYKAQQAPTA 168
Query: 174 MQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQ 233
+ R LLDPA++ F RLK ++ K++E + ++A FT +S GK LMAKC+ L
Sbjct: 169 LALRTALLDPAVNLLFERLKKELKATKAKLEETQNELSAWKFTPDSNTGKRLMAKCRLLY 228
Query: 234 EENDEIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLML 293
+EN+E+G+ G +L +LA+QKS + E+K L + L +DVE +L L
Sbjct: 229 QENEELGKMTSNGRLAKLETELAMQKSFSEEVKKSQSELDDFLQELDEDVEGMQSTILFL 288
Query: 294 REKLEENDHELEKLKHELRQ-KSVLEEDKNDSVSDKNIGNDVTVS 337
+++L+ ++ L+ E Q K ++++ + N G + T++
Sbjct: 289 QQELKTTRDRIQTLEKENAQLKQAIKDEVVAPAAATNGGTNTTIN 333
>sp|Q28XY0|FL2D_DROPS Pre-mRNA-splicing regulator female-lethal(2)D OS=Drosophila
pseudoobscura pseudoobscura GN=fl(2)d PE=3 SV=2
Length = 560
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Query: 114 RLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPL 173
RL+ + ++TLK + + + A+++E + A +EQE + S + + KAQ P
Sbjct: 116 RLLEDEIETLKLEQVRMGQICADAQRREKILMRRLANKEQEFQDYVSQIAEYKAQQAPTA 175
Query: 174 MQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQ 233
+ R LLDPA++ F RLK ++ K++E + ++A FT +S GK LMAKC+ L
Sbjct: 176 LALRTALLDPAVNLLFERLKKELKATKTKLEETQNELSAWKFTPDSNTGKRLMAKCRLLY 235
Query: 234 EENDEIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLML 293
+EN+E+G+ G +L +LA+QKS + E+K L + L +DVE +L L
Sbjct: 236 QENEELGKMTSNGRLAKLETELAMQKSFSEEVKKSQSELDDFLQELDEDVEGMQSTILFL 295
Query: 294 REKLEEND---HELEKLKHELRQKSVLEEDKNDSVS 326
+++L+ LEK +L+Q K+D+V+
Sbjct: 296 QQELKTTRDRIQTLEKDNAQLKQAHT----KDDTVA 327
>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
Length = 6885
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 123 LKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLD 182
L+ S + ++ QL + K+ + + T+ + E++I ELKS ++ LKAQ + PL
Sbjct: 5787 LQDSWKDMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSEDPL--------- 5837
Query: 183 PAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEENDEIGRQ 242
P +HE+ K L++E ++ + +N+ + L+ L+E+ + + RQ
Sbjct: 5838 PELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRHVLVEDVMVLKEQIEHLHRQ 5897
Query: 243 NEEGETHQLSVKLALQK 259
E+ L +++A++K
Sbjct: 5898 WED-----LCLRVAIRK 5909
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,001,768
Number of Sequences: 539616
Number of extensions: 4949739
Number of successful extensions: 30145
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 1831
Number of HSP's that attempted gapping in prelim test: 26279
Number of HSP's gapped (non-prelim): 4798
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)