Query 019371
Match_columns 342
No_of_seqs 243 out of 1191
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:03:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019371.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019371hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 2.1E-24 7.3E-29 204.4 15.7 196 111-333 10-217 (280)
2 1xhb_A Polypeptide N-acetylgal 93.9 1.2 4.2E-05 43.4 15.1 166 154-327 63-254 (472)
3 2d7i_A Polypeptide N-acetylgal 93.7 2.1 7.1E-05 43.3 16.8 164 154-325 146-332 (570)
4 3bcv_A Putative glycosyltransf 91.6 3 0.0001 35.8 12.9 171 152-333 34-226 (240)
5 2ffu_A Ppgalnact-2, polypeptid 90.0 6.1 0.00021 38.8 14.8 161 153-325 99-284 (501)
6 4fix_A UDP-galactofuranosyl tr 89.9 6.1 0.00021 40.9 15.2 126 202-330 258-416 (657)
7 2z86_A Chondroitin synthase; G 87.1 21 0.00072 35.8 16.8 119 203-321 165-318 (625)
8 1qg8_A Protein (spore coat pol 86.2 16 0.00054 31.6 16.1 118 202-326 78-209 (255)
9 2z86_A Chondroitin synthase; G 80.1 18 0.00062 36.3 12.8 158 152-325 404-566 (625)
10 4hg6_A Cellulose synthase subu 76.8 33 0.0011 36.1 14.0 130 197-330 224-367 (802)
11 2bo4_A Mannosylglycerate synth 43.1 33 0.0011 33.2 5.9 168 152-324 28-210 (397)
12 2c0n_A A197; thermophil protei 39.1 86 0.003 27.7 7.3 116 209-333 50-183 (203)
13 1fo8_A Alpha-1,3-mannosyl-glyc 32.1 69 0.0023 30.3 6.0 86 202-296 89-179 (343)
14 2fy7_A Beta-1,4-galactosyltran 31.4 2.2E+02 0.0074 25.8 9.2 89 209-319 126-214 (287)
15 1vf5_H Protein PET N; photosyn 28.1 51 0.0017 20.1 2.7 24 15-38 3-26 (29)
16 3ckj_A Putative uncharacterize 25.2 3.8E+02 0.013 24.1 10.9 90 205-294 124-228 (329)
17 1q90_N Cytochrome B6F complex 23.2 56 0.0019 20.2 2.3 24 15-38 5-28 (31)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.92 E-value=2.1e-24 Score=204.43 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=133.0
Q ss_pred CCCceEEEEEeCCCCC-HHHHHHHHHHHhcCcchhhccccCCCeEEEEEeecCCCCCCcchHhhHHhhhhCCCceeeCCC
Q 019371 111 KKRPLVVIGILTRFGR-KNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHH 189 (342)
Q Consensus 111 ~~~~~llI~V~S~~~~-~~rR~aIR~TW~~~~~~lk~le~~~~i~v~FviG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~ 189 (342)
...-.|+|+|+|++++ ..|+.+||+||++.... ..|+.+..++ ..+... ..++++. .++
T Consensus 10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-----------~~fifsd~~d------~~l~~~--~~~~~~~-~~~ 69 (280)
T 2j0a_A 10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-----------QTFIFTDSPD------ERLQER--LGPHLVV-TQC 69 (280)
T ss_dssp CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-----------GEEEEESSCC------HHHHHH--HGGGEEE-CCC
T ss_pred CCcccEEEEEECcHHHHHHHHHHHHHHHhccCCC-----------ceEEEcCCCc------cccccc--cccccee-ccc
Confidence 3456899999999985 56999999999987642 1243333322 223322 2345554 455
Q ss_pred C--CCCCCchHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHHHHHhhcCCCCceeEEecccCcccccCCCccccCCcc
Q 019371 190 V--EAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWW 267 (342)
Q Consensus 190 ~--D~y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~~L~~~~~~~~~yiG~~~~g~v~rd~~~kwy~p~~w 267 (342)
. +++.+++.|+...+.+... .+++|++|+|||+|||+++|..+|..+++..++|+|+...+.+++. +++.|.+
T Consensus 70 ~~~~~~~~l~~K~~~~~~~~l~-~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~---~~~~~~~- 144 (280)
T 2j0a_A 70 SAEHSHPALSCKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHA---SELQSKQ- 144 (280)
T ss_dssp -------CCCHHHHHHHHHHHH-HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-----------------
T ss_pred cccccccchHHHHHHHHHHHhC-CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccc---cccCccc-
Confidence 3 4678899999999997653 5899999999999999999999999999999999999754444432 3444432
Q ss_pred ccCCCCccCcCc-cCCeeeecHHHHHHHHHhcccC-------CCCCcChHHHHHHHc-cCCCeEeeCCCcccCCC
Q 019371 268 KFGDKKLYFRHA-SGEMYVISRALAKFISINRSIL-------RTYAHDDVSAGSWFL-GLDVKYLNEGKFCCSSW 333 (342)
Q Consensus 268 ~~~~~~~Yp~y~-~G~gYilS~dla~~I~~~~~~l-------~~~~~EDV~lG~~l~-~l~V~~i~~~~f~~~~~ 333 (342)
.+....| +|| +|+||+||+++++.|+...... .....||+++|.|+. .+||.+.+...|+.+.+
T Consensus 145 -~~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~ 217 (280)
T 2j0a_A 145 -RTKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE 217 (280)
T ss_dssp -------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred -ccccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence 1122245 466 5689999999999998743222 223468999999998 99999999999998876
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=93.95 E-value=1.2 Score=43.40 Aligned_cols=166 Identities=13% Similarity=0.091 Sum_probs=86.1
Q ss_pred EEEEEeecCCCCCCcchHhhHHhhhhCC-CceeeCCCCCCCCCchHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHHH
Q 019371 154 ITRFVIGRSANRGDSLDQDIDSENKQTN-DFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGA 232 (342)
Q Consensus 154 ~v~FviG~s~~~~~~~~~~I~~E~~~~~-DIl~l~d~~D~y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~ 232 (342)
.++.|-..|.+ +...+.+++-.+++. .+.++. ..+ |.. .-.+...+.+.-..+|++..|+|+.+.++-|..
T Consensus 63 EIIvVDd~S~d--~~t~~~l~~~~~~~~~~v~vi~-~~~---n~G--~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 63 EIVLVDDASER--DFLKRPLESYVKKLKVPVHVIR-MEQ---RSG--LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEECSCCC--GGGTHHHHHHHHSSSSCEEEEE-CSS---CCC--HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred EEEEEECCCCc--HHHHHHHHHHHHHCCCcEEEEE-CCC---CCC--hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 56556544432 124444554445566 454442 222 222 223344455555789999999999999988888
Q ss_pred HHhhcCCCCce-eEEecc--cCcccc-cCCC-------ccccCCccccC------------CCCccCcCccCCeeeecHH
Q 019371 233 TLATHLDKPRV-YIGCMK--SGDVFS-EPGH-------KWYEPDWWKFG------------DKKLYFRHASGEMYVISRA 289 (342)
Q Consensus 233 ~L~~~~~~~~~-yiG~~~--~g~v~r-d~~~-------kwy~p~~w~~~------------~~~~Yp~y~~G~gYilS~d 289 (342)
++......+.. .+|.+. ....+. .... .|.....|... ......+++.|++++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 77765333333 333221 110000 0000 01100000000 0122345688999999999
Q ss_pred HHHHHHHhcccCCCCCcChHHHHHHHc--cCCCeEeeCCC
Q 019371 290 LAKFISINRSILRTYAHDDVSAGSWFL--GLDVKYLNEGK 327 (342)
Q Consensus 290 la~~I~~~~~~l~~~~~EDV~lG~~l~--~l~V~~i~~~~ 327 (342)
+...+---...+..+..||+-++.-+. +..+..+....
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~ 254 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSH 254 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcE
Confidence 999876433444455689988875544 44454444433
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=93.71 E-value=2.1 Score=43.30 Aligned_cols=164 Identities=9% Similarity=0.007 Sum_probs=84.7
Q ss_pred EEEEEeecCCCCCCcchHhhHHhhhhCCCceeeCCCCCCCCCchHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHHHH
Q 019371 154 ITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGAT 233 (342)
Q Consensus 154 ~v~FviG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~D~y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~~ 233 (342)
.|+.|-..|.+ +.+.+.+++..+++..|.++. ..++ ..+. .+...+.+.-..+|++..|+|+.+.++-|..+
T Consensus 146 EIIVVDDgS~D--~tl~~~l~~~~~~~~~v~vi~-~~~n-~G~~----~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~l 217 (570)
T 2d7i_A 146 EIVLVDDFSDR--EHLKKPLEDYMALFPSVRILR-TKKR-EGLI----RTRMLGASVATGDVITFLDSHCEANVNWLPPL 217 (570)
T ss_dssp EEEEEECSCCC--GGGTHHHHHHHTTSTTEEEEE-CSSC-CCHH----HHHHHHHHHCCSSEEEECCSSEEECTTCSHHH
T ss_pred EEEEEECCCCc--HHHHHHHHHHHHhCCeEEEEE-CCCC-CCHH----HHHHHHHHhcCCCEEEEEcCCccccccHHHHH
Confidence 46566554443 232455555555666565542 2221 2222 23344444446899999999999998877777
Q ss_pred HhhcCCCCceeEEe-cc--cCcc--cccC--C-----Cccc-----cCC----ccccCCCCccCcCccCCeeeecHHHHH
Q 019371 234 LATHLDKPRVYIGC-MK--SGDV--FSEP--G-----HKWY-----EPD----WWKFGDKKLYFRHASGEMYVISRALAK 292 (342)
Q Consensus 234 L~~~~~~~~~yiG~-~~--~g~v--~rd~--~-----~kwy-----~p~----~w~~~~~~~Yp~y~~G~gYilS~dla~ 292 (342)
+......+...+|. +. .+.. .+.. . -.|. .+. ....+......+++.|+++++++++..
T Consensus 218 l~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~ 297 (570)
T 2d7i_A 218 LDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFW 297 (570)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHH
T ss_pred HHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHH
Confidence 76543333444433 21 1110 0000 0 0010 000 000001112234678999999999999
Q ss_pred HHHHhcccCCCCCcChHHHHHHHccCC--CeEeeC
Q 019371 293 FISINRSILRTYAHDDVSAGSWFLGLD--VKYLNE 325 (342)
Q Consensus 293 ~I~~~~~~l~~~~~EDV~lG~~l~~l~--V~~i~~ 325 (342)
.+---...+..+..||+-+..-+...| +..+..
T Consensus 298 ~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 332 (570)
T 2d7i_A 298 ELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPC 332 (570)
T ss_dssp HTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred hcCCCCCcccccCcchHHHHHHHHhCCCeEEEccC
Confidence 885433444445579998875554443 444443
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=91.65 E-value=3 Score=35.84 Aligned_cols=171 Identities=13% Similarity=0.038 Sum_probs=80.4
Q ss_pred CeEEEEEeecCCCCCCcchHhhHHhhhhCCCceeeCCCCCCCCCchHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHH
Q 019371 152 GIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLG 231 (342)
Q Consensus 152 ~i~v~FviG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~D~y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~ 231 (342)
.+.++.|-..|.+ ...+.+++-.+++..+.++. .+ |.. .-...+.+.+....+|++.+|+|.++.++.|.
T Consensus 34 ~~eiIvvDd~S~d---~t~~~~~~~~~~~~~i~~i~--~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~ 103 (240)
T 3bcv_A 34 DIEIILIDDESPD---NCPKICDDYAAQYPNIKVIH--KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYM 103 (240)
T ss_dssp SEEEEEEECCCSS---SHHHHHHHHHHHCSSEEEEE--CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHH
T ss_pred CeEEEEEECCCCc---CHHHHHHHHHhhCCCEEEEE--CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHH
Confidence 4566666654442 33344444445566665542 22 222 12344555555578999999999999988887
Q ss_pred HHHhhcCC-CCceeEEecc----cCcc---ccc-C-CCccccCCcc-----ccCCCC-cc---C-cCccCCeeeecHHHH
Q 019371 232 ATLATHLD-KPRVYIGCMK----SGDV---FSE-P-GHKWYEPDWW-----KFGDKK-LY---F-RHASGEMYVISRALA 291 (342)
Q Consensus 232 ~~L~~~~~-~~~~yiG~~~----~g~v---~rd-~-~~kwy~p~~w-----~~~~~~-~Y---p-~y~~G~gYilS~dla 291 (342)
.++..... ...+.+|... .+.+ +.. + ...++....+ .+.... .+ + ...+|++.++.++++
T Consensus 104 ~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 183 (240)
T 3bcv_A 104 TMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLI 183 (240)
T ss_dssp HHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHH
T ss_pred HHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHH
Confidence 77665432 3344443321 1110 000 0 0011110000 000000 00 0 013578899999999
Q ss_pred HHHHHhcccCCCCCcChHHHHHHHccC--CCeEeeCCCcccCCC
Q 019371 292 KFISINRSILRTYAHDDVSAGSWFLGL--DVKYLNEGKFCCSSW 333 (342)
Q Consensus 292 ~~I~~~~~~l~~~~~EDV~lG~~l~~l--~V~~i~~~~f~~~~~ 333 (342)
..+-.....-..+..||.-+..-+... .+..+++. +.++..
T Consensus 184 ~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~-~~~yr~ 226 (240)
T 3bcv_A 184 EKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT-FYNYRT 226 (240)
T ss_dssp HHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC---------
T ss_pred HHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC-eEEEEe
Confidence 886422111112346999998655444 46666555 444443
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=90.05 E-value=6.1 Score=38.83 Aligned_cols=161 Identities=10% Similarity=0.056 Sum_probs=83.4
Q ss_pred eEEEEEeecCCCCCCcchHhhHHhhhhCCCceeeCCCCCCCCCchHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHHH
Q 019371 153 IITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGA 232 (342)
Q Consensus 153 i~v~FviG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~D~y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~ 232 (342)
..+++|-..|.+ +++ ....+++..+.++. ..+ |.. + -.+...+.+.-..+|++.+|+|+.+.++-|..
T Consensus 99 ~EIIvVDDgS~D--~t~----~~~~~~~~~v~vi~-~~~---n~G-~-~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ 166 (501)
T 2ffu_A 99 KEIILVDDYSND--PED----GALLGKIEKVRVLR-NDR---REG-L-MRSRVRGADAAQAKVLTFLDSHCECNEHWLEP 166 (501)
T ss_dssp EEEEEEECSCSC--THH----HHGGGGBTTEEEEE-CSS---CCH-H-HHHHHHHHHHCCSSEEEECCSSEEECTTCHHH
T ss_pred eeEEEEECCCCc--hHH----HHHHhcCCCEEEEE-CCC---CcC-H-HHHHHHHHHhcCCCEEEEECCCcccCccHHHH
Confidence 356666655543 222 22234455555442 222 322 2 33445555555789999999999999888888
Q ss_pred HHhhcCCCCceeEEe-cc--cCcccc--c--C----CCccccCCccc----------c-C-CCCccCcCccCCeeeecHH
Q 019371 233 TLATHLDKPRVYIGC-MK--SGDVFS--E--P----GHKWYEPDWWK----------F-G-DKKLYFRHASGEMYVISRA 289 (342)
Q Consensus 233 ~L~~~~~~~~~yiG~-~~--~g~v~r--d--~----~~kwy~p~~w~----------~-~-~~~~Yp~y~~G~gYilS~d 289 (342)
++......+...++. +. ....+. . . .-.|.....|. . . ......+++.|++.+++++
T Consensus 167 ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 246 (501)
T 2ffu_A 167 LLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKF 246 (501)
T ss_dssp HHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHH
T ss_pred HHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHH
Confidence 777653333323332 21 000000 0 0 00010000000 0 0 0112345678999999999
Q ss_pred HHHHHHHhcccCCCCCcChHHHHHHHc--cCCCeEeeC
Q 019371 290 LAKFISINRSILRTYAHDDVSAGSWFL--GLDVKYLNE 325 (342)
Q Consensus 290 la~~I~~~~~~l~~~~~EDV~lG~~l~--~l~V~~i~~ 325 (342)
+...+---...+..+..||+-+..-+. +..+..+..
T Consensus 247 ~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 284 (501)
T 2ffu_A 247 YFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPC 284 (501)
T ss_dssp HHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccC
Confidence 999886433444455589998865444 444444443
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=89.89 E-value=6.1 Score=40.93 Aligned_cols=126 Identities=17% Similarity=0.112 Sum_probs=69.8
Q ss_pred HHHHHHHhcCCccEEEEEcCeEEeeHHHHHHHHhhcC--CCCceeEEecc--cCc-ccccCCCccccCCc--c-------
Q 019371 202 LFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHL--DKPRVYIGCMK--SGD-VFSEPGHKWYEPDW--W------- 267 (342)
Q Consensus 202 ~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~~L~~~~--~~~~~yiG~~~--~g~-v~rd~~~kwy~p~~--w------- 267 (342)
.+++.+....+++|++..|||+.+.++.|..++.... +...+..|.+. ..+ .+ ...+.|..... |
T Consensus 258 ~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 336 (657)
T 4fix_A 258 RVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHL-HIMGEVVDRSIFMWTAAPHAE 336 (657)
T ss_dssp HHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEE-CCSCEEEETTTTEEEECTTCC
T ss_pred HHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCcee-eecccEecccccccccccccc
Confidence 3556665544789999999999999988888776543 23333333332 111 00 00011111000 0
Q ss_pred ---cc--------------CCCCccCcCccCCeeeecHHHHHHHHHhcccCCCCCcChHHHHHHHccCC--CeEeeCCCc
Q 019371 268 ---KF--------------GDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLD--VKYLNEGKF 328 (342)
Q Consensus 268 ---~~--------------~~~~~Yp~y~~G~gYilS~dla~~I~~~~~~l~~~~~EDV~lG~~l~~l~--V~~i~~~~f 328 (342)
.| +.......|++|++.++.+++.+.+---.+ -.+..||+-++.=+...| +..+.+...
T Consensus 337 ~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~a~V 414 (657)
T 4fix_A 337 YDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPGAAI 414 (657)
T ss_dssp SCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECCEEE
Confidence 00 011223458899999999999998743222 123469999987666554 444444433
Q ss_pred cc
Q 019371 329 CC 330 (342)
Q Consensus 329 ~~ 330 (342)
.|
T Consensus 415 ~H 416 (657)
T 4fix_A 415 WH 416 (657)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=87.14 E-value=21 Score=35.78 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=65.0
Q ss_pred HHHHHHhcCCccEEEEEcCeEEeeHHHHHHHHhhcCCCC-ceeEEecc---cCc-c----------ccc-----------
Q 019371 203 FFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKP-RVYIGCMK---SGD-V----------FSE----------- 256 (342)
Q Consensus 203 ~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~~L~~~~~~~-~~yiG~~~---~g~-v----------~rd----------- 256 (342)
.++.+.+....+|++..|+|..+.++.|..++......+ ...+|... .+. . ++.
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVA 244 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchh
Confidence 344555555789999999999999888887776543222 23333321 110 0 000
Q ss_pred ------CCCccccCCcc---ccCCCCccCcCccCCeeeecHHHHHHHHHhcccCCCCCcChHHHHHHHccCCCe
Q 019371 257 ------PGHKWYEPDWW---KFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVK 321 (342)
Q Consensus 257 ------~~~kwy~p~~w---~~~~~~~Yp~y~~G~gYilS~dla~~I~~~~~~l~~~~~EDV~lG~~l~~l~V~ 321 (342)
....|...... ..........++.|++.+++++++..+---...+..+..||.-++.=+...|..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~ 318 (625)
T 2z86_A 245 GKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCY 318 (625)
T ss_dssp -------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCE
T ss_pred hhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCce
Confidence 00001000000 000011122357899999999999988533333444458999998766655533
No 8
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=86.20 E-value=16 Score=31.56 Aligned_cols=118 Identities=13% Similarity=-0.023 Sum_probs=68.5
Q ss_pred HHHHHHHhcCCccEEEEEcCeEEeeHHHHHHHHhhcC--CCCceeEEecc----c--CcccccCCCccccCCccccCCCC
Q 019371 202 LFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHL--DKPRVYIGCMK----S--GDVFSEPGHKWYEPDWWKFGDKK 273 (342)
Q Consensus 202 ~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~~L~~~~--~~~~~yiG~~~----~--g~v~rd~~~kwy~p~~w~~~~~~ 273 (342)
..++.+.+....+|++.+|||.++.++.|..++.... +...+..|.+. . +.++. .+..|.. .. ..
T Consensus 78 ~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~-~~--~~ 150 (255)
T 1qg8_A 78 ALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVK----ETVRPAA-QV--TW 150 (255)
T ss_dssp HHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEE----EEEECCC-SC--BS
T ss_pred HHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchh----hccCchH-HH--HH
Confidence 4556666666899999999999999888887776543 33344444432 1 11111 1112211 01 11
Q ss_pred ccCcCccCCeeeecHHHHHHHHHhc-----ccCCCCCcChHHHHHHHccCC-CeEeeCC
Q 019371 274 LYFRHASGEMYVISRALAKFISINR-----SILRTYAHDDVSAGSWFLGLD-VKYLNEG 326 (342)
Q Consensus 274 ~Yp~y~~G~gYilS~dla~~I~~~~-----~~l~~~~~EDV~lG~~l~~l~-V~~i~~~ 326 (342)
....++.|++.++.++++..+-... ........||..+..-+...+ +..+++.
T Consensus 151 ~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 209 (255)
T 1qg8_A 151 NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEE 209 (255)
T ss_dssp CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTCCBEEEEEE
T ss_pred hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhCCEEEecCc
Confidence 2344568899999999999876211 011224579998876665443 4444443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=80.12 E-value=18 Score=36.26 Aligned_cols=158 Identities=8% Similarity=-0.035 Sum_probs=80.5
Q ss_pred CeEEEEEeecCCCCCCcchHhhHHhhhhCCCceeeCCCCCCCCCchHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHH
Q 019371 152 GIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLG 231 (342)
Q Consensus 152 ~i~v~FviG~s~~~~~~~~~~I~~E~~~~~DIl~l~d~~D~y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~ 231 (342)
.+.++.|-..|.+ ...+.+++-.+++..+.++. .+ |.. .-..++.+.+....+|++..|+|.++.++.|.
T Consensus 404 ~~eiivvdd~S~d---~t~~~~~~~~~~~~~i~~~~--~~---n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~ 473 (625)
T 2z86_A 404 DLEVCICDDGSTD---DTLRILQEHYANHPRVRFIS--QK---NKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVE 473 (625)
T ss_dssp SEEEEEEEESCSS---SHHHHHHHHHTTCTTEEEEE--EC---CCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHH
T ss_pred CeEEEEEECcCCh---hHHHHHHHHHhhCCcEEEEe--CC---CCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHH
Confidence 4567666655543 23334443344455555441 22 221 22344555555578999999999999998888
Q ss_pred HHHhhcC--CCCceeEEecccCcccccCCCccccC-CccccCC-CCccCcCccCCeeeecHHHHHHHHHhcccCCCCCcC
Q 019371 232 ATLATHL--DKPRVYIGCMKSGDVFSEPGHKWYEP-DWWKFGD-KKLYFRHASGEMYVISRALAKFISINRSILRTYAHD 307 (342)
Q Consensus 232 ~~L~~~~--~~~~~yiG~~~~g~v~rd~~~kwy~p-~~w~~~~-~~~Yp~y~~G~gYilS~dla~~I~~~~~~l~~~~~E 307 (342)
.++.... +.-.+..|... ..++.+++... ..|..+. ......++.|.+.++.+++...+---... ....|
T Consensus 474 ~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~--~~~~e 547 (625)
T 2z86_A 474 LCLDEFRKDLSLACVYTTNR----NIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNES--ISNAV 547 (625)
T ss_dssp HHHHHHHHCTTCSEEEEEEE----EECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHHTTTTCCCSS--CSSCH
T ss_pred HHHHHHHhCCCeeEEEeeeE----EECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHHHHhCCCCCc--cCChH
Confidence 8776542 33233333221 00111221110 0111111 11222346778889999876654321122 22469
Q ss_pred hHHHHHHHccCC-CeEeeC
Q 019371 308 DVSAGSWFLGLD-VKYLNE 325 (342)
Q Consensus 308 DV~lG~~l~~l~-V~~i~~ 325 (342)
|.-+..-+...| +.+++.
T Consensus 548 D~dl~~r~~~~g~~~~~~~ 566 (625)
T 2z86_A 548 DYDMYLKLSEVGPFKHINK 566 (625)
T ss_dssp HHHHHHHHTTTSCEEEEEE
T ss_pred HHHHHHHHHHhCCEEEeCC
Confidence 998876665554 444444
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=76.82 E-value=33 Score=36.11 Aligned_cols=130 Identities=12% Similarity=-0.025 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHhcCCccEEEEEcCeEEeeHHHHHHHHhhc--CCCCceeEEecc--cCcccccCCCcc--ccCCccccC
Q 019371 197 PNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATH--LDKPRVYIGCMK--SGDVFSEPGHKW--YEPDWWKFG 270 (342)
Q Consensus 197 t~Kt~~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L~~~L~~~--~~~~~~yiG~~~--~g~v~rd~~~kw--y~p~~w~~~ 270 (342)
..|.- .++.+.+..+.+|++.+|+|+.+.++.|..++... +++-.+..|... ...+.......+ ...+...++
T Consensus 224 ~GKa~-alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (802)
T 4hg6_A 224 HAKAG-NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFY 302 (802)
T ss_dssp SHHHH-HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHH
T ss_pred CcchH-HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHH
Confidence 44544 45666666689999999999999999888887765 233223323221 111110000000 000000000
Q ss_pred C------CCccCcCccCCeeeecHHHHHHHHHhcccCCCCCcChHHHHHHHccCCC--eEeeCCCccc
Q 019371 271 D------KKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDV--KYLNEGKFCC 330 (342)
Q Consensus 271 ~------~~~Yp~y~~G~gYilS~dla~~I~~~~~~l~~~~~EDV~lG~~l~~l~V--~~i~~~~f~~ 330 (342)
. ...-.+++.|++.++.+++.+.+---.. ..-.||..++.-+...|. ..+++.....
T Consensus 303 ~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~---~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~ 367 (802)
T 4hg6_A 303 GKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAG---ETITEDAETALEIHSRGWKSLYIDRAMIAG 367 (802)
T ss_dssp HTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCC---SSSSHHHHHHHHHHTTTCCEEECCCCCEEE
T ss_pred HHHHhhHhhcCCceecccchhhhHHHHHHcCCcCC---CCcchHHHHHHHHHHcCCeEEEecCCEEEe
Confidence 0 0001234679999999999998742111 123599999988876654 4454444433
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=43.13 E-value=33 Score=33.16 Aligned_cols=168 Identities=8% Similarity=-0.062 Sum_probs=85.8
Q ss_pred CeEEEEEeecCCCCCCcchHhhHHhhh-hCCCcee-eCCCC-CC--CCCchHHHHHHHHHHHhcCCccEEEEEcCeE-Ee
Q 019371 152 GIITRFVIGRSANRGDSLDQDIDSENK-QTNDFFI-LDHHV-EA--PKEFPNKAKLFFAYAVDKWDAEYYAKVNDDV-YV 225 (342)
Q Consensus 152 ~i~v~FviG~s~~~~~~~~~~I~~E~~-~~~DIl~-l~d~~-D~--y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDv-~V 225 (342)
...+++|-+.|.+.....-+++.++.. .++.-++ +. .. .+ -.....=...+++|+...-+.++++.+|-|. ..
T Consensus 28 ~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~-~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~ 106 (397)
T 2bo4_A 28 RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRL-QERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSF 106 (397)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEE-CCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSC
T ss_pred CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEe-cccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Confidence 356888888777521112222222333 3444332 21 11 01 2345556778888887435789999999999 47
Q ss_pred eHHHHHHHHhhcCCCCceeEEeccc---CcccccCCCccccCCccccCC--CCccCcCccCCeeeecHHHHHHHHHhc--
Q 019371 226 NIDSLGATLATHLDKPRVYIGCMKS---GDVFSEPGHKWYEPDWWKFGD--KKLYFRHASGEMYVISRALAKFISINR-- 298 (342)
Q Consensus 226 n~~~L~~~L~~~~~~~~~yiG~~~~---g~v~rd~~~kwy~p~~w~~~~--~~~Yp~y~~G~gYilS~dla~~I~~~~-- 298 (342)
+++-+..++......-.+.+|.... +..+.....++.... +|+ .....+...++.+++++++++.+....
T Consensus 107 ~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~---~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~ 183 (397)
T 2bo4_A 107 GPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFAL---LWPHTELSWIEQPLGGELLMRREVAAMLYEDERV 183 (397)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHH---HCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHH
T ss_pred CHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHH---HHHHhhccccccCCcccEEEeHHHHHHHhhhccc
Confidence 8877777776543333566675321 111111111110000 111 001223335677899999999885321
Q ss_pred ccCCCCCcChHHHHHHHc--cCCCeEee
Q 019371 299 SILRTYAHDDVSAGSWFL--GLDVKYLN 324 (342)
Q Consensus 299 ~~l~~~~~EDV~lG~~l~--~l~V~~i~ 324 (342)
...+.|. .|+.+-..+. ++.|.-+.
T Consensus 184 ~~~~~fg-~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 184 RRRSDWG-IDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp HTCCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred CcCCCcc-hHHHHHHHHHHcCCEEEEEE
Confidence 1223343 3666655443 45554444
No 12
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=39.12 E-value=86 Score=27.67 Aligned_cols=116 Identities=16% Similarity=0.040 Sum_probs=68.6
Q ss_pred hcCCccEEEEEcCe---EEeeHHHHHHHHhhcCCCCceeEEec--ccCcccccCCCccccCCccccCCCCccCcCccCCe
Q 019371 209 DKWDAEYYAKVNDD---VYVNIDSLGATLATHLDKPRVYIGCM--KSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEM 283 (342)
Q Consensus 209 ~~~~a~f~lKvDDD---v~Vn~~~L~~~L~~~~~~~~~yiG~~--~~g~v~rd~~~kwy~p~~w~~~~~~~Yp~y~~G~g 283 (342)
...++++++.+|-| +-.+++.+..+|.. ..++.+|.. +... --....+.|.-+ ..+ .=-.||+.+.
T Consensus 50 ~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~-~~s~~a~~y~~~---i~~--~~V~d~~tGF 120 (203)
T 2c0n_A 50 EMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLR-GYSVYRKDWEKE---IFD--GEVNGCGLGF 120 (203)
T ss_dssp HCTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSS-SBSEESSSBCSS---CCC--EECSEECSSE
T ss_pred hcCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCC-ccchHHHHHHHh---ccC--ceeeeccccE
Confidence 35689999999999 99999999999965 345788874 2211 000001112111 111 1235788899
Q ss_pred eeecHHHHHHHHHhc------ccCCCCCcChHHHHHHHc-------cCCCeEeeCCCcccCCC
Q 019371 284 YVISRALAKFISINR------SILRTYAHDDVSAGSWFL-------GLDVKYLNEGKFCCSSW 333 (342)
Q Consensus 284 YilS~dla~~I~~~~------~~l~~~~~EDV~lG~~l~-------~l~V~~i~~~~f~~~~~ 333 (342)
.++++.+...|.... ...+..--|||++=.-.. ++...|.=+.++-.+..
T Consensus 121 ~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 183 (203)
T 2c0n_A 121 TFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFIDERLALSPD 183 (203)
T ss_dssp EEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESSSSEEECTT
T ss_pred EEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccccccccceeeccccccCcc
Confidence 999999999875431 112223459999855444 33444555666655544
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=32.12 E-value=69 Score=30.32 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=46.5
Q ss_pred HHHHHHHhcCCccEEEEEcCeEEeeHHHH---HHHHhhcCCCCceeEEecccCcccccCCCccccCCccccCCCC--ccC
Q 019371 202 LFFAYAVDKWDAEYYAKVNDDVYVNIDSL---GATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKK--LYF 276 (342)
Q Consensus 202 ~~~~wa~~~~~a~f~lKvDDDv~Vn~~~L---~~~L~~~~~~~~~yiG~~~~g~v~rd~~~kwy~p~~w~~~~~~--~Yp 276 (342)
.+++++.+...+++++.+|||+.+.++=+ .+.|......++++.=+-.+.. ..+..... .+.. ..-
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~n~~-----g~~~~~~~----~~~~~lyrs 159 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDN-----GKEQMVDS----SKPELLYRT 159 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTT-----CBGGGSCT----TCTTCEEEE
T ss_pred HHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecccCc-----cccccccc----cCcceEEee
Confidence 45555555457999999999999998654 3334333344566432211111 00000000 0000 122
Q ss_pred cCccCCeeeecHHHHHHHHH
Q 019371 277 RHASGEMYVISRALAKFISI 296 (342)
Q Consensus 277 ~y~~G~gYilS~dla~~I~~ 296 (342)
.|..|.|+++++++=+.+-.
T Consensus 160 ~~f~~wGWa~wr~~W~e~~~ 179 (343)
T 1fo8_A 160 DFFPGLGWLLLAELWAELEP 179 (343)
T ss_dssp SSCCCSSEEEEHHHHHHHGG
T ss_pred cCCCchhhhhcHHHHHHHhh
Confidence 34568899999999886643
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=31.35 E-value=2.2e+02 Score=25.80 Aligned_cols=89 Identities=11% Similarity=0.017 Sum_probs=48.9
Q ss_pred hcCCccEEEEEcCeEEeeHHHHHHHHhhcCCCCceeEEecccCcccccCCCccccCCccccCCCCccCcCccCCeeeecH
Q 019371 209 DKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISR 288 (342)
Q Consensus 209 ~~~~a~f~lKvDDDv~Vn~~~L~~~L~~~~~~~~~yiG~~~~g~v~rd~~~kwy~p~~w~~~~~~~Yp~y~~G~gYilS~ 288 (342)
+.-..+|++.+|+|+.+..+.+. ......++. + + +..... . + ...| ....|+..++.+
T Consensus 126 ~~A~gd~i~flD~D~i~~~d~~~---~~~~~~p~~----~----------~-~~~~~~-~-~-~~~~-~~~~G~~~~~rr 183 (287)
T 2fy7_A 126 KDYDYTCFVFSDVDLIPMNDHNA---YRCFSQPRH----I----------S-VAMDKF-G-F-SLPY-VQYFGGVSALSK 183 (287)
T ss_dssp HHSCCCEEEEECTTEEESBTTSC---CSCCSSCEE----C----------C-CEEGGG-T-T-SCSS-TTCCCSEEEEEH
T ss_pred HhCCCCEEEEECCCcccCCCcce---EecCCCCce----E----------E-Eeeccc-c-c-CCCc-CceeeeEEEEEH
Confidence 55578999999999999888521 000001110 0 0 000000 0 0 0112 245688999999
Q ss_pred HHHHHHHHhcccCCCCCcChHHHHHHHccCC
Q 019371 289 ALAKFISINRSILRTYAHDDVSAGSWFLGLD 319 (342)
Q Consensus 289 dla~~I~~~~~~l~~~~~EDV~lG~~l~~l~ 319 (342)
++...+---...+..+..||+-+..=+...|
T Consensus 184 ~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G 214 (287)
T 2fy7_A 184 QQFLTINGFPNNYWGWGGEDDDIFNRLVFRG 214 (287)
T ss_dssp HHHHHTTSCCSCCSSCSCHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCccccccccchHHHHHHHHHcC
Confidence 9988764222334445579998876554443
No 15
>1vf5_H Protein PET N; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.27.1 PDB: 2d2c_H* 2e74_H* 2e75_H* 2e76_H* 2zt9_H*
Probab=28.06 E-value=51 Score=20.07 Aligned_cols=24 Identities=25% Similarity=0.133 Sum_probs=20.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHhcc
Q 019371 15 ARTRISSLLLSMFATFASIYVAGR 38 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~r 38 (342)
..+--|+.++.+|+|-+.+.|-||
T Consensus 3 ivsl~WaalmvvftfSlslVVWGR 26 (29)
T 1vf5_H 3 IDVLGWVALLVVFTWSIAMVVWGR 26 (29)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHhheeeeEEEEec
Confidence 345679999999999999999887
No 16
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=25.19 E-value=3.8e+02 Score=24.12 Aligned_cols=90 Identities=12% Similarity=0.042 Sum_probs=48.9
Q ss_pred HHHHhcCCccEEEEEcCeEE-eeHHHHHHHHhhc--CCCCceeEEeccc----Ccc----cccCCCcccc---CCcc-cc
Q 019371 205 AYAVDKWDAEYYAKVNDDVY-VNIDSLGATLATH--LDKPRVYIGCMKS----GDV----FSEPGHKWYE---PDWW-KF 269 (342)
Q Consensus 205 ~wa~~~~~a~f~lKvDDDv~-Vn~~~L~~~L~~~--~~~~~~yiG~~~~----g~v----~rd~~~kwy~---p~~w-~~ 269 (342)
+.+.+....+|++.+|+|.. +.++.|..++... ++.-.+.+|.... +.. .+...++.+. .... ..
T Consensus 124 n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
T 3ckj_A 124 WRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAAL 203 (329)
T ss_dssp HHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHHHHHH
T ss_pred HHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHHHHh
Confidence 44445457899999999999 8888888777652 2344566665421 110 0111111110 0000 01
Q ss_pred CCCCccCcCccCCeeeecHHHHHHH
Q 019371 270 GDKKLYFRHASGEMYVISRALAKFI 294 (342)
Q Consensus 270 ~~~~~Yp~y~~G~gYilS~dla~~I 294 (342)
++......++.|+.+++++++++.+
T Consensus 204 ~~~~~~~~~~~~g~~~~rr~~l~~i 228 (329)
T 3ckj_A 204 RPELGCILQPLGGEYAATRELLTSV 228 (329)
T ss_dssp CGGGGGCSCTTCSCEEEEHHHHTTS
T ss_pred hhhhccccCCCccceeeeHHHHHhC
Confidence 1111123456788899999999876
No 17
>1q90_N Cytochrome B6F complex subunit PETN; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.27.1
Probab=23.23 E-value=56 Score=20.18 Aligned_cols=24 Identities=25% Similarity=0.062 Sum_probs=20.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHhcc
Q 019371 15 ARTRISSLLLSMFATFASIYVAGR 38 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~r 38 (342)
..+--|+.++.+|+|-+.+.|-||
T Consensus 5 ivsl~WaalmvvfTfSlslVVWGR 28 (31)
T 1q90_N 5 IVQIGWAATCVMFSFSLSLVVWGR 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHhheeeEEEEEec
Confidence 456679999999999999999887
Done!