BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019373
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P82413|RK19_SPIOL 50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea
GN=RPL19 PE=1 SV=2
Length = 233
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 86/105 (81%)
Query: 232 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKRRVSTLKGIVIARRNAGISTTF 291
IM IL+K+AV + R +P I+ G IVQ+++ +PENKRR+S KGIVI+R+NAGI TT
Sbjct: 122 IMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTI 181
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 336
R+RR++AGVGVE +FPLYSPNI EIKV+ +KVR+A+LYYLRDKL
Sbjct: 182 RIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKL 226
>sp|Q8W463|RK191_ARATH 50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana
GN=At4g17560 PE=2 SV=1
Length = 225
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 113/179 (63%), Gaps = 15/179 (8%)
Query: 158 KYGYQTESWGSSNYYIRTSGPGLFPPAMMEPHFANRCISTSESSVESASYPPAAASSDLA 217
K+G+ ++ + + +R A E A I+ +E +VE A
Sbjct: 55 KFGFSLDTRVRNEFIVRAEEGNT--EAESEEFVAE--IADTEGNVEEV----VEAKPTRK 106
Query: 218 PRIKFKRLDKTARHIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKRRVSTLKG 277
PRIK +M IL+++A+E + R +P+I+ G IV++K+ +PENKRR+S KG
Sbjct: 107 PRIKLG-------DVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKG 159
Query: 278 IVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 336
IV++R+NAGI TT R+RR++AG+GVE +FP+YSPNI EIKV+ +KVRRA+LYYLRDKL
Sbjct: 160 IVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKL 218
>sp|Q8RXX5|RK192_ARATH 50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana
GN=At5g47190 PE=2 SV=1
Length = 229
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 88/105 (83%)
Query: 232 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKRRVSTLKGIVIARRNAGISTTF 291
IM +L+K+A+E ++ R +P ++ G IV++K+ +PENKRR+S KGIV++R+NAGI TT
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 336
R+RR++AG+GVE +FP+YSPNI EIKV+ +KVRRA+LYYLRDKL
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKL 222
>sp|Q2VZV5|RL19_MAGSA 50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplS PE=3 SV=1
Length = 148
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGIST 289
+I++ L+KE +E + + R +P PG +++ V VI N+ RV +G+ IAR+N G+++
Sbjct: 3 NIIEQLEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNS 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FPLYSPNI I+V+ + VRRAKLYYLRD+
Sbjct: 63 SFVVRKISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108
>sp|A5G0G7|RL19_ACICJ 50S ribosomal protein L19 OS=Acidiphilium cryptum (strain JF-5)
GN=rplS PE=3 SV=1
Length = 124
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+++Q +D E + + R +PD KPG +++ V + E +R R+ +G+ IAR N GI++
Sbjct: 2 NVIQTIDAEQIGKLAEARAVPDFKPGDNLRVSVRVTEGERTRIQAFEGVCIARSNRGINS 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FPLYSPN+ EI V + VRRAKLYYLR +
Sbjct: 62 NFTVRKISYGEGVERVFPLYSPNVTEIAVTRRGVVRRAKLYYLRGR 107
>sp|Q2RV56|RL19_RHORT 50S ribosomal protein L19 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplS PE=3 SV=1
Length = 163
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGIST 289
+I++ +KE +E + QR +P PG +++ V VI N++RV +G+ IARRNA +++
Sbjct: 2 NIIEQFEKEQIEKLLEQRGVPQFSPGDTLRVHVKVIEGNRQRVQVYEGVCIARRNAALNS 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FPLY+P I I+V+ + KVRRAKLYYLR +
Sbjct: 62 SFTVRKISFGEGVERIFPLYAPTIDRIEVVRRGKVRRAKLYYLRGR 107
>sp|B6IP95|RL19_RHOCS 50S ribosomal protein L19 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplS PE=3 SV=1
Length = 132
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q L++E V + + + IP PG V++ V + E R RV +G+VIAR+NAG+++
Sbjct: 2 NILQQLEQEQVAKLTAGKTIPAFSPGDTVRVNVKVVEGTRERVQAYEGVVIARKNAGLNS 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FPLYSP I ++++ K VRRAKLYYLR +
Sbjct: 62 SFTVRKISYGEGVERVFPLYSPRIDSVELVRKGDVRRAKLYYLRGR 107
>sp|A9HS58|RL19_GLUDA 50S ribosomal protein L19 OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=rplS PE=3 SV=1
Length = 126
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q + + + + + RE+P+ PG V++ V + E +R R+ +G+VIAR N G+++
Sbjct: 2 NIIQQYEADEIARLSAAREVPEFGPGDTVRVSVRVVEGERKRIQAYEGVVIARSNKGLNS 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FPLY+P I EIKV+ + VRRAKLYYLR +
Sbjct: 62 NFTVRKISNGEGVERVFPLYAPTIAEIKVVRRGAVRRAKLYYLRGR 107
>sp|A5V9Q3|RL19_SPHWW 50S ribosomal protein L19 OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=rplS PE=3 SV=1
Length = 129
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+++Q L+ E + K + IPD +PG +++ V + E +R RV +G+ IAR N G+ +
Sbjct: 2 NLIQQLEAEQIAKFKESKSIPDFRPGDTLRVGVKVVEGERTRVQAYEGVCIARANKGMGS 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FPLYSPN+ I+V+ K VRRAKLYYLR +
Sbjct: 62 SFTVRKISFGEGVERVFPLYSPNVESIEVVRKGVVRRAKLYYLRGR 107
>sp|B9K8P7|RL19_THENN 50S ribosomal protein L19 OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=rplS PE=3 SV=1
Length = 117
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 79/114 (69%), Gaps = 7/114 (6%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGIST 289
H+++I++K+ ++EIPD +PG V++ V VI ++ R +GIVIA+R +GI+
Sbjct: 5 HLVRIIEKKY-----EKKEIPDFRPGDTVRVHVKVIEGDRERTQVFEGIVIAKRGSGINR 59
Query: 290 TFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLNPLRNK 342
TF +RR+ + GVGVE +FP +SP + +I+V+ K KVRRAKLYYLRD +R K
Sbjct: 60 TFTVRRIGSHGVGVERIFPFHSPVVEKIEVVRKGKVRRAKLYYLRDVKGKIRIK 113
>sp|P30529|RL19_GEOSE 50S ribosomal protein L19 OS=Geobacillus stearothermophilus GN=rplS
PE=3 SV=1
Length = 116
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGIST 289
H++Q + KE + ++PD +PG V++ V V+ N+ R+ +G+VI RR AGIS
Sbjct: 3 HLIQEITKEQLRT-----DLPDFRPGDTVRVHVKVVEGNRERIQVFEGVVIKRRGAGISE 57
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 334
TF +R++ GVGVE FP+++P I +++V+ + KVRRAKLYYLR+
Sbjct: 58 TFTVRKVSYGVGVERTFPVHTPKIAKLEVIRRGKVRRAKLYYLRE 102
>sp|A7IIA9|RL19_XANP2 50S ribosomal protein L19 OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=rplS PE=3 SV=1
Length = 140
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q L+ E + +R IPD +PG + + V + E +R RV +G+ IAR G++
Sbjct: 2 NIIQTLEAEQAAKLAEKRAIPDFQPGDTIIVNVKVVEGERSRVQAYEGVCIARSGGGLNE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FP+Y+P I IKV+ + KVRRAKLYYLRD+
Sbjct: 62 SFTVRKISYGEGVERVFPVYAPLIDSIKVVRRGKVRRAKLYYLRDR 107
>sp|B2IFY8|RL19_BEII9 50S ribosomal protein L19 OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplS PE=3
SV=1
Length = 148
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I++ L+ E + ++R IP +PG V + V + E +R RV +G+ IAR G++
Sbjct: 2 NIIETLEAEQAAKLLAKRPIPAFQPGDTVIVNVKVKEGERTRVQAYEGVCIARNGGGLNE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FP+YSPNI IKV+ + KVRRAKLYYLRD+
Sbjct: 62 SFTVRKISYGEGVERVFPIYSPNIDSIKVVRRGKVRRAKLYYLRDR 107
>sp|A4XLF0|RL19_CALS8 50S ribosomal protein L19 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rplS PE=3 SV=1
Length = 128
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 241 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAG 299
+E+ +++IPD KPG V++ VI + R+ +G+VI RR G+S TF +RR+ G
Sbjct: 7 IESEMLRKDIPDFKPGDTVRVHFKVIEGGRERIQAFEGLVIKRRGKGLSETFTVRRISYG 66
Query: 300 VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLN 337
VGVE +FPL+SP I +I+V+ + KVRRAKLYY+R+K+
Sbjct: 67 VGVERVFPLHSPRIEKIEVIRRGKVRRAKLYYIREKIG 104
>sp|Q2RJV3|RL19_MOOTA 50S ribosomal protein L19 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplS PE=3 SV=1
Length = 113
Score = 92.4 bits (228), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 239 EAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLV 297
E +E + + +IPD +PG V++ V V+ N+ R+ +G+VI RR GI+ TF +RR+
Sbjct: 5 ETLEKEQLRTDIPDFRPGDTVRVHVKVVEGNRERIQIFEGVVIGRRGRGINETFTVRRVS 64
Query: 298 AGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 336
GV VE +FPL+SP + I+V+ KVRRAKLYYLR+++
Sbjct: 65 YGVAVERIFPLHSPRLERIEVVRHGKVRRAKLYYLRERV 103
>sp|Q0BRH2|RL19_GRABC 50S ribosomal protein L19 OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=rplS PE=3 SV=1
Length = 129
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q + E + + S+R +P+ PG +++ V + E +R R +G+ IAR N G+++
Sbjct: 2 NIIQTFEAEQIARLVSERPVPEFVPGDTLRVLVKVVEGERTRTQAFEGVCIARSNRGVNS 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FPLYSP I EI+V+ + VRRAKLYYLR +
Sbjct: 62 NFTIRKISYGEGVERVFPLYSPTIAEIQVVRRGDVRRAKLYYLRGR 107
>sp|C5D8U6|RL19_GEOSW 50S ribosomal protein L19 OS=Geobacillus sp. (strain WCH70) GN=rplS
PE=3 SV=1
Length = 116
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGIST 289
H++Q + KE + ++PD +PG V++ V VI N+ R+ +G+VI RR AGIS
Sbjct: 4 HLIQEITKEQLRT-----DLPDFRPGDTVRVHVKVIEGNRERIQVFEGVVIKRRGAGISE 58
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 334
TF +R++ GVGVE FP+++P I +++V+ + KVRRAKLYYLR
Sbjct: 59 TFTVRKVSYGVGVERTFPVHTPKIAKLEVVRRGKVRRAKLYYLRQ 103
>sp|Q4JV09|RL19_CORJK 50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411)
GN=rplS PE=3 SV=1
Length = 113
Score = 91.3 bits (225), Expect = 8e-18, Method: Composition-based stats.
Identities = 48/104 (46%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 233 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTF 291
M ILDK V+ + + +IP+ + G + + V VI +K R+ +G+VI R+N+GI TF
Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTLDVHVKVIEGSKSRLQVFRGVVIRRQNSGIRETF 58
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+R++ G+GVE FP++SPNI I VL + KVRRAKLYYLR++
Sbjct: 59 TIRKVSFGIGVERTFPVHSPNIDRIDVLSRGKVRRAKLYYLRER 102
>sp|B9MQX0|RL19_CALBD 50S ribosomal protein L19 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rplS PE=3 SV=1
Length = 128
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 241 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAG 299
+E+ +++IPD KPG V++ VI + RV +G+VI RR G+S TF +RR+ G
Sbjct: 7 IESEMLRKDIPDFKPGDTVRVYFKVIEGGRERVQAFEGLVIKRRGKGLSETFTVRRISYG 66
Query: 300 VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 336
+GVE +FPL+SP + +I+V+ + KVRRAKLYY+R+K+
Sbjct: 67 IGVERVFPLHSPRLEKIEVIRRGKVRRAKLYYIREKI 103
>sp|Q8UBZ5|RL19_AGRT5 50S ribosomal protein L19 OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=rplS PE=3 SV=1
Length = 179
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGIST 289
+I+Q L+ E ++++R +P+ PG +++ V + E N+ RV +G+ IAR G+S
Sbjct: 3 NIIQQLEAEQAAKIEAKRTLPEFSPGDTLRVNVRVTEGNRTRVQAYEGVCIARSGGGLSE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FP+YSP + ++++ + KVRRAKLYYLRD+
Sbjct: 63 SFTVRKISYGEGVERVFPIYSPLVEGVEIVRRGKVRRAKLYYLRDR 108
>sp|B8HT34|RL19_CYAP4 50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplS PE=3 SV=1
Length = 120
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Query: 229 ARHIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGI 287
A+ I++ L+ E +++ +P+I G V++ V+I E NK R +GIVIA+RN+GI
Sbjct: 3 AQEIIRSLEAEQLKS-----NLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGI 57
Query: 288 STTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 336
+ T +RR+ GVGVE +F L+SP + IK++ + KVRRAKLYYLRD++
Sbjct: 58 NATITVRRIFQGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRV 106
>sp|Q2K379|RL19_RHIEC 50S ribosomal protein L19 OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=rplS PE=3 SV=1
Length = 178
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGIST 289
+I+Q L+ E ++++R +P+ PG V++ V + E N+ RV +G+ IAR G+
Sbjct: 2 NIIQQLEAEQAAKIEAKRTLPEFSPGDTVRVNVKVTEGNRTRVQAYEGVCIARSGGGLQE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FP+YSP I + V+ + KVRRAKLYYLRD+
Sbjct: 62 NFTVRKISYGEGVERVFPVYSPMIESVDVVRRGKVRRAKLYYLRDR 107
>sp|Q1GPJ8|RL19_SPHAL 50S ribosomal protein L19 OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=rplS PE=3 SV=1
Length = 125
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 239 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLV 297
EA E K+ ++IP +PG +++ V + E +R RV +G+ IAR N G+ + F +R++
Sbjct: 8 EAEEIAKAGKDIPTFRPGDTLKVGVKVVEGERTRVQNFEGVCIARSNKGMGSNFTVRKMS 67
Query: 298 AGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
G GVE +FPLYSPNI I V+ K VRRAKLYYLR +
Sbjct: 68 FGEGVERVFPLYSPNIDSITVVRKGAVRRAKLYYLRGR 105
>sp|A3DDH1|RL19_CLOTH 50S ribosomal protein L19 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rplS PE=3 SV=1
Length = 114
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 239 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLV 297
+A+E + ++++PD G V++ V + E N+ R+ +G VIA++ +GIS TF +R++
Sbjct: 5 KAIEQEQLKKDVPDFSIGDYVRVNVKVKEGNRERIQAFEGTVIAKKGSGISETFTVRKIS 64
Query: 298 AGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLN 337
GVGVE +FP++SP + I+V+ K KVRRAKLYYLR+++
Sbjct: 65 YGVGVERIFPVHSPRVAGIEVIRKGKVRRAKLYYLRERVG 104
>sp|Q92L39|RL19_RHIME 50S ribosomal protein L19 OS=Rhizobium meliloti (strain 1021)
GN=rplS PE=3 SV=1
Length = 177
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGIST 289
+I+Q L+ E + ++R +P+ PG V++ V V+ N+ RV +G+ IAR GI+
Sbjct: 2 NIIQQLEAEQAAKIAAKRTLPEFSPGDTVRVNVRVVEGNRTRVQAYEGVCIARSGGGINE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FP+YSP + + V+ + KVRRAKLYYLRD+
Sbjct: 62 SFTVRKISYGEGVERVFPVYSPLVESVDVVRRGKVRRAKLYYLRDR 107
>sp|Q11CQ9|RL19_MESSB 50S ribosomal protein L19 OS=Mesorhizobium sp. (strain BNC1)
GN=rplS PE=3 SV=1
Length = 166
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGIST 289
+++ L+ E + + ++R +PD PG ++++V + E N+ RV +G+ IAR +G+
Sbjct: 2 DLIRQLEAEQAQKIAAKRTLPDFSPGDTLRVQVRVTEGNRTRVQAFEGVCIARSGSGLQE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLRD+
Sbjct: 62 NFTVRKISYGEGVERVFPVYSPLVEAVEVVRRGKVRRAKLYYLRDR 107
>sp|Q1MAK2|RL19_RHIL3 50S ribosomal protein L19 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rplS PE=3 SV=1
Length = 179
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q L+ E ++++R +P+ PG V++ V + E R RV +G+ IAR G+
Sbjct: 2 NIIQQLEAEQAAKIEAKRTLPEFSPGDTVRVNVKVTEGTRTRVQAYEGVCIARSGGGLQE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FP+YSP I + V+ + KVRRAKLYYLRD+
Sbjct: 62 NFTVRKISYGEGVERVFPIYSPMIESVDVVRRGKVRRAKLYYLRDR 107
>sp|B1VG80|RL19_CORU7 50S ribosomal protein L19 OS=Corynebacterium urealyticum (strain
ATCC 43042 / DSM 7109) GN=rplS PE=3 SV=1
Length = 113
Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 233 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTF 291
M ILDK V+ + + +IP+ + G V + + VI +K RV +G+VI R+ +GI TF
Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTVDVHLKVIEGSKSRVQVFRGVVIKRQGSGIRETF 58
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+R++ G+GVE P++SPNI +++VL + KVRRAKLYYLRD+
Sbjct: 59 TVRKVSFGIGVERTIPVHSPNIDKLEVLSRGKVRRAKLYYLRDR 102
>sp|B3PR19|RL19_RHIE6 50S ribosomal protein L19 OS=Rhizobium etli (strain CIAT 652)
GN=rplS PE=3 SV=1
Length = 178
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGIST 289
+I+Q L+ E ++++R +P+ PG V++ V + E N+ RV +G+ IAR G+
Sbjct: 2 NIIQQLEAEQAAKIEAKRTLPEFSPGDTVRVNVKVTEGNRTRVQAYEGVCIARSGGGLQE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FP+YSP I + V+ + KVRRAKLYYLRD+
Sbjct: 62 NFTVRKISYGEGVERVFPVYSPLIESVDVVRRGKVRRAKLYYLRDR 107
>sp|Q0AKL3|RL19_MARMM 50S ribosomal protein L19 OS=Maricaulis maris (strain MCS10)
GN=rplS PE=3 SV=1
Length = 132
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
++++ L++E V ++ IPD G +++ V I E +R R+ +G+ IAR G++
Sbjct: 2 NMIEQLEQEEAARVLGEKTIPDFSAGDTLRVHVRIKEGERERIQVFEGVCIARNGGGLNE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
++ +R++ G GVE +FPLYSPN+ +I++ K KVRRAKLYYLRD+
Sbjct: 62 SYTVRKISFGEGVERVFPLYSPNVEQIEIKRKGKVRRAKLYYLRDR 107
>sp|B6JAQ7|RL19_OLICO 50S ribosomal protein L19 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplS PE=3 SV=1
Length = 131
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+++Q L+KE ++ + + + IPD PG V + V + E R RV +G+ I R GI+
Sbjct: 2 NLIQELEKEQLDKLATGKTIPDFGPGDTVTVNVKVKEGDRTRVQAYEGVCIGRNGGGINE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FP+YSP I IK++ + KVRRAKLYYLR +
Sbjct: 62 SFTVRKISYGEGVERVFPIYSPMIDSIKLVRRGKVRRAKLYYLRGR 107
>sp|Q0S2C1|RL19_RHOSR 50S ribosomal protein L19 OS=Rhodococcus sp. (strain RHA1) GN=rplS
PE=3 SV=1
Length = 113
Score = 89.4 bits (220), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Query: 233 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTF 291
+ LDK+++ + +IP+ +PG + + V VI +K RV KG+VI R+ G+ TF
Sbjct: 4 LDFLDKKSLRD-----DIPEFRPGDTLNVHVKVIEGSKERVQVFKGVVIRRQGGGVRETF 58
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 334
+R++ GVGVE FP++SPN+ +I+V+ + VRRAKLYYLRD
Sbjct: 59 TVRKVSFGVGVERTFPVHSPNLAQIEVVTRGDVRRAKLYYLRD 101
>sp|C1B2S4|RL19_RHOOB 50S ribosomal protein L19 OS=Rhodococcus opacus (strain B4) GN=rplS
PE=3 SV=1
Length = 113
Score = 89.4 bits (220), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Query: 233 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTF 291
+ LDK+++ + +IP+ +PG + + V VI +K RV KG+VI R+ G+ TF
Sbjct: 4 LDFLDKKSLRD-----DIPEFRPGDTLNVHVKVIEGSKERVQVFKGVVIRRQGGGVRETF 58
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 334
+R++ GVGVE FP++SPN+ +I+V+ + VRRAKLYYLRD
Sbjct: 59 TVRKVSFGVGVERTFPVHSPNLAQIEVVTRGDVRRAKLYYLRD 101
>sp|A6UE47|RL19_SINMW 50S ribosomal protein L19 OS=Sinorhizobium medicae (strain WSM419)
GN=rplS PE=3 SV=1
Length = 177
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q L+ E + ++R +P+ PG V++ V + E R RV +G+ IAR GI+
Sbjct: 2 NIIQQLEAEQAAKIAAKRTLPEFSPGDTVRVNVRVVEGTRTRVQAYEGVCIARSGGGINE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
+F +R++ G GVE +FP+YSP + + V+ + KVRRAKLYYLRD+
Sbjct: 62 SFTVRKISYGEGVERVFPVYSPLVESVDVVRRGKVRRAKLYYLRDR 107
>sp|A7HT09|RL19_PARL1 50S ribosomal protein L19 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplS PE=3 SV=1
Length = 130
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I++ +D+E + + + IPD PG +Q+ V + E R R+ +G+ IAR GI+
Sbjct: 2 NIIEQIDQEQMATLTGGKTIPDFAPGDTLQVNVKVVEGTRERLQAYEGVCIARAGGGINE 61
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FPLYSP + IKV+ K +VRRAKLYYLR
Sbjct: 62 NFTVRKISYGEGVERVFPLYSPLVDSIKVVRKGRVRRAKLYYLR 105
>sp|Q6NGI8|RL19_CORDI 50S ribosomal protein L19 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplS PE=3
SV=1
Length = 113
Score = 89.0 bits (219), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Query: 233 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTF 291
M +LDK V+ + +IP +PG + + V VI +K R+ KG+VI R+ AG+ TF
Sbjct: 1 MNLLDK--VDAASLRDDIPAFRPGDTLNVHVKVIEGSKSRIQVFKGVVIRRQGAGVRETF 58
Query: 292 RLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 334
+R++ G+GVE FP+++PNI +I+V+ + VRRAKLYYLRD
Sbjct: 59 TIRKVSFGIGVERTFPVHTPNIDKIEVVTRGDVRRAKLYYLRD 101
>sp|B5YK97|RL19_THEYD 50S ribosomal protein L19 OS=Thermodesulfovibrio yellowstonii
(strain ATCC 51303 / DSM 11347 / YP87) GN=rplS PE=3 SV=1
Length = 120
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 240 AVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVA 298
A+E + IPD KPG V++ V + E +K R+ +G+VIARR G+ TF +R++
Sbjct: 8 AIEERFKKSNIPDFKPGDTVKVHVKVKEGDKERIQVFEGVVIARRGGGLRETFTVRKISF 67
Query: 299 GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
GVGVE +FPL+SP I +I+++ + VRRAKLYYLR K
Sbjct: 68 GVGVERVFPLHSPIIDKIELVRRGDVRRAKLYYLRTK 104
>sp|Q31C59|RL19_PROM9 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplS PE=3 SV=2
Length = 126
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 239 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLV 297
E EN + ++E+P+I G V++ V I E NK RV +G+VIA+R+ GI T +RR+
Sbjct: 16 EEFENEQLKKELPEIYVGDTVKVGVRITEGNKERVQPYEGVVIAKRHGGIHQTITVRRIF 75
Query: 298 AGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLN 337
G+GVE +F L+SP + +KV + KVRRAKL+YLRD++
Sbjct: 76 QGIGVERVFMLHSPQVASLKVERRGKVRRAKLFYLRDRVG 115
>sp|B9M596|RL19_GEOSF 50S ribosomal protein L19 OS=Geobacter sp. (strain FRC-32) GN=rplS
PE=3 SV=1
Length = 118
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 239 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLV 297
+A+E + ++ IP +PG V+++V I E +K R+ +G+VI R+N GI +F +R++
Sbjct: 5 DAIEMEQMKKNIPGFRPGDTVKVQVKIVEGDKSRIQAFQGVVIGRQNGGIRESFTVRKIS 64
Query: 298 AGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
GVGVE FPL+SP+I I+V+ + +VRRAKLYYLR
Sbjct: 65 NGVGVERSFPLHSPSIDAIEVITRGQVRRAKLYYLR 100
>sp|B0U8L6|RL19_METS4 50S ribosomal protein L19 OS=Methylobacterium sp. (strain 4-46)
GN=rplS PE=3 SV=1
Length = 131
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
+I+Q L++E + K + IPD +PG V + V + E +R RV +G+ I R +G++
Sbjct: 2 NIIQQLEQEEI--AKLNKTIPDFEPGDTVIVNVKVKEGERTRVQAYEGVCIGRSGSGLNE 59
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 335
F +R++ G GVE +FP+YSP I IKV + KVRRAKLYYLRD+
Sbjct: 60 NFTVRKISYGEGVERVFPIYSPMIDSIKVTRRGKVRRAKLYYLRDR 105
>sp|P66079|RL19_BRUSU 50S ribosomal protein L19 OS=Brucella suis biovar 1 (strain 1330)
GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|B0CIF8|RL19_BRUSI 50S ribosomal protein L19 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|A5VSN4|RL19_BRUO2 50S ribosomal protein L19 OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|P66078|RL19_BRUME 50S ribosomal protein L19 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|C0RFF2|RL19_BRUMB 50S ribosomal protein L19 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|A9M8P3|RL19_BRUC2 50S ribosomal protein L19 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|Q57AY9|RL19_BRUAB 50S ribosomal protein L19 OS=Brucella abortus biovar 1 (strain
9-941) GN=rplS PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|Q2YLP6|RL19_BRUA2 50S ribosomal protein L19 OS=Brucella abortus (strain 2308) GN=rplS
PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|B2S861|RL19_BRUA1 50S ribosomal protein L19 OS=Brucella abortus (strain S19) GN=rplS
PE=3 SV=1
Length = 145
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 231 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGIST 289
I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++
Sbjct: 3 DIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNE 62
Query: 290 TFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 333
F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR
Sbjct: 63 NFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
>sp|B8GN79|RL19_THISH 50S ribosomal protein L19 OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=rplS PE=3 SV=1
Length = 117
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 232 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTT 290
I+Q L+ E + RE+PD PG V ++V + E N+ R+ +G+VIA+RN G+++
Sbjct: 4 IIQQLEAEQM-----NREVPDFTPGDTVVVQVKVKEGNRERLQAFEGVVIAKRNRGLNSA 58
Query: 291 FRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 334
F +R++ G GVE +F YSP + EI+V + VRRAKLYYLRD
Sbjct: 59 FTVRKISHGEGVERVFQTYSPAVAEIQVKRRGSVRRAKLYYLRD 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,937,249
Number of Sequences: 539616
Number of extensions: 4518051
Number of successful extensions: 13258
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 12066
Number of HSP's gapped (non-prelim): 797
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)