Query 019376
Match_columns 342
No_of_seqs 117 out of 138
Neff 3.9
Searched_HMMs 46136
Date Fri Mar 29 08:57:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019376.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019376hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05910 DUF868: Plant protein 100.0 1E-108 2E-113 779.2 30.7 225 23-265 1-238 (274)
2 cd00110 LamG Laminin G domain; 94.0 0.58 1.2E-05 38.4 9.4 80 120-228 45-127 (151)
3 PF05910 DUF868: Plant protein 87.1 3.4 7.4E-05 40.6 8.6 71 31-113 143-220 (274)
4 smart00282 LamG Laminin G doma 81.5 3.5 7.6E-05 33.8 5.2 51 178-229 57-110 (135)
5 PF02210 Laminin_G_2: Laminin 77.2 6 0.00013 31.2 5.1 48 180-228 51-102 (128)
6 PRK00051 hisI phosphoribosyl-A 70.3 13 0.00028 32.9 5.9 70 121-202 12-87 (125)
7 COG0139 HisI Phosphoribosyl-AM 70.3 13 0.00028 32.4 5.7 71 121-202 16-91 (111)
8 PF06439 DUF1080: Domain of Un 63.0 15 0.00032 31.6 4.9 40 175-215 119-159 (185)
9 PF00054 Laminin_G_1: Laminin 58.2 1.1E+02 0.0023 25.6 9.1 48 180-228 50-101 (131)
10 PF05506 DUF756: Domain of unk 58.2 64 0.0014 25.6 7.4 36 206-241 35-74 (89)
11 PF06905 FAIM1: Fas apoptotic 56.5 60 0.0013 30.1 7.9 41 182-225 15-58 (177)
12 PF14099 Polysacc_lyase: Polys 44.3 24 0.00053 31.8 3.3 54 178-239 147-205 (224)
13 PRK02759 bifunctional phosphor 40.7 68 0.0015 30.5 5.7 70 121-202 14-89 (203)
14 smart00210 TSPN Thrombospondin 39.6 43 0.00093 29.9 4.1 43 181-227 116-158 (184)
15 PLN02346 histidine biosynthesi 37.5 67 0.0014 31.9 5.3 70 122-202 53-127 (271)
16 PF07691 PA14: PA14 domain; I 35.4 1.7E+02 0.0037 23.9 6.8 57 119-193 57-120 (145)
17 COG1873 Protein implicated in 35.4 56 0.0012 26.8 3.8 38 165-202 8-47 (87)
18 PF13385 Laminin_G_3: Concanav 33.2 76 0.0016 25.2 4.2 61 122-210 51-112 (157)
19 smart00216 VWD von Willebrand 29.7 3.5E+02 0.0076 22.9 8.6 40 196-235 82-126 (162)
20 TIGR02148 Fibro_Slime fibro-sl 27.0 1.6E+02 0.0035 24.8 5.2 23 188-210 21-43 (90)
21 KOG0273 Beta-transducin family 25.8 59 0.0013 34.8 2.9 63 200-265 263-350 (524)
22 PF07691 PA14: PA14 domain; I 23.6 1.8E+02 0.004 23.8 5.0 31 182-214 59-89 (145)
23 cd08023 GH16_laminarinase_like 21.8 2E+02 0.0044 26.1 5.4 33 180-213 156-188 (235)
24 KOG3516 Neurexin IV [Signal tr 21.1 2E+02 0.0044 34.1 6.1 48 182-230 446-522 (1306)
25 cd00070 GLECT Galectin/galacto 20.6 1.8E+02 0.0039 24.3 4.4 31 178-209 72-103 (127)
26 smart00560 LamGL LamG-like jel 20.5 1.9E+02 0.0041 24.2 4.6 28 182-209 61-89 (133)
27 smart00276 GLECT Galectin. Gal 20.3 1.8E+02 0.0038 24.5 4.3 33 178-211 71-104 (128)
No 1
>PF05910 DUF868: Plant protein of unknown function (DUF868); InterPro: IPR008586 This family consists of several hypothetical proteins from plants. The function of this family is unknown.
Probab=100.00 E-value=1.1e-108 Score=779.25 Aligned_cols=225 Identities=45% Similarity=0.854 Sum_probs=212.4
Q ss_pred CCCcceEEEEEEeeecCCCeEEEEEcccccCCCeeEEEEcCCc-----ceeeecCCCcccccccccCCCCcceEEEeccC
Q 019376 23 QVPQNLITCIYQTQICKSPTYLTLTWSKNLFSHSLTIYAADSF-----SLTISLHPSTFSSFFRSRPGSGSKSIYLTQQH 97 (342)
Q Consensus 23 ~s~q~~vT~vY~t~L~g~~~litvTWsk~l~g~sLsv~i~~~~-----s~k~~~kPw~~~~~fwkkkG~~SKsf~~~~~~ 97 (342)
+++||+|||||||+|+|++++||||||||+|||+|+|.|+++. +||++++||+ |||||| ||+|++ +
T Consensus 1 ~s~q~~vT~vY~~~l~g~~~litvTWsk~~~g~~Lsv~v~~~~~~~~~~~k~~~~p~~----fwkkkG--sKsf~~---~ 71 (274)
T PF05910_consen 1 PSPQNSVTCVYQTKLSGKPRLITVTWSKNLLGQSLSVSVDDASGSSSSSCKVDLKPWL----FWKKKG--SKSFEV---D 71 (274)
T ss_pred CCCCceEEEEEEEEecCCceEEEEEEeCCccCCeEEEEEeCccccccccccccCccce----eEecCC--cccccc---C
Confidence 4679999999999999999999999999999999999999864 8999999999 999999 999999 9
Q ss_pred CCeEEEEecCCcccccCCCCCCCCceEEEEEECceEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeee
Q 019376 98 YQRIKLHWDFTRAQFTQNSAEPDSGFYIAISCNARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSR 177 (342)
Q Consensus 98 ~~~V~v~WDLs~Akf~~s~PEP~sgfYVAVv~d~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~Tk 177 (342)
+++|+|||||++|||+ ++|||++|||||||+|+||||+||||++|||+|++++|.+. +++||+|||||||++.|+||
T Consensus 72 ~~~v~v~WDLs~Akf~-s~PEP~sgfYVavv~d~EvvLllGDl~~ea~~rt~~~~~~~--~~~LvsRrEhv~G~~~~~Tk 148 (274)
T PF05910_consen 72 GPKVDVFWDLSSAKFG-SGPEPVSGFYVAVVVDGEVVLLLGDLKKEAYKRTKSRPSPS--EAVLVSRREHVFGKKVYSTK 148 (274)
T ss_pred CceEEEEeCccccccC-CCCCCCCccEEEEEECCEEEEEecCchhHHHhhccCCCCcc--ceeEEEEEEEEEEEEEEeeE
Confidence 9999999999999997 89999999999999999999999999999999999998433 89999999999999999999
Q ss_pred EEEc--ceeceEEEEe--cCCc----eEEEEEcCEEEEEEeeeccccccceEEEeCCcEEEEEEEeeecccCCCCCccCC
Q 019376 178 AHFL--GSKHEIGIEC--SDGG----VLKVKVDGETSLVIKRLAWKFRGHERIYVDGIEVEFFWDVFNWINNNGSAAAAG 249 (342)
Q Consensus 178 A~F~--G~~HeI~Iec--~~~g----~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~~VeV~WDVHdWlF~~~~~~~~~ 249 (342)
|||+ |++|||+||| +.+| +|+|+||||+|||||||||||||||||+|||+|||||||||||||++.+
T Consensus 149 a~F~e~G~~HeI~Iec~~~~~g~~dp~l~V~VDgk~v~~VkrL~WkFRGNqti~vdg~~V~V~WDVHdWlF~~~~----- 223 (274)
T PF05910_consen 149 ARFCEGGKEHEISIECGGETGGPKDPELWVSVDGKKVVQVKRLRWKFRGNQTIFVDGLPVQVFWDVHDWLFNNGP----- 223 (274)
T ss_pred EEEcCCCcEEEEEEEEeccCCCCCCceEEEEECCEEEEEEEEeeecccCceEEEECCeEEEEEEEhhhhhhccCC-----
Confidence 9997 9999999999 4344 9999999999999999999999999999999999999999999999532
Q ss_pred CCCcceEEEEEecCCC
Q 019376 250 TGNGHGVFIFQFGEGG 265 (342)
Q Consensus 250 ~~~g~AVFmFr~~~~~ 265 (342)
+.|||||||||+.+.
T Consensus 224 -~~~~AVFmFr~~~~~ 238 (274)
T PF05910_consen 224 -GSGHAVFMFRPRSGL 238 (274)
T ss_pred -CCCceEEEEEecCCc
Confidence 567999999999764
No 2
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Probab=93.99 E-value=0.58 Score=38.43 Aligned_cols=80 Identities=16% Similarity=0.169 Sum_probs=56.9
Q ss_pred CCceEEEEEECceEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCceEE
Q 019376 120 DSGFYIAISCNARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGVLK 198 (342)
Q Consensus 120 ~sgfYVAVv~d~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~L~ 198 (342)
...|+.+-+.++.+.+.+..-.+ ...+.+..+++ |+.|.|.|+... +.+.
T Consensus 45 ~~~~~~l~l~~g~l~~~~~~g~~----------------------------~~~~~~~~~v~dg~Wh~v~i~~~~-~~~~ 95 (151)
T cd00110 45 GGDFLALELEDGRLVLRYDLGSG----------------------------SLVLSSKTPLNDGQWHSVSVERNG-RSVT 95 (151)
T ss_pred CCCEEEEEEECCEEEEEEcCCcc----------------------------cEEEEccCccCCCCEEEEEEEECC-CEEE
Confidence 55676666678888888776310 01223333677 999999999984 6999
Q ss_pred EEEcCEEEEEEeeecc--ccccceEEEeCCcE
Q 019376 199 VKVDGETSLVIKRLAW--KFRGHERIYVDGIE 228 (342)
Q Consensus 199 V~VDgk~vl~VKRL~W--kFRGNetI~vDG~~ 228 (342)
+.|||+.+++...-.. .+..+..|+++|.|
T Consensus 96 l~VD~~~~~~~~~~~~~~~~~~~~~~~iGg~~ 127 (151)
T cd00110 96 LSVDGERVVESGSPGGSALLNLDGPLYLGGLP 127 (151)
T ss_pred EEECCccEEeeeCCCCceeecCCCCeEEcCCC
Confidence 9999997777655444 36777888998875
No 3
>PF05910 DUF868: Plant protein of unknown function (DUF868); InterPro: IPR008586 This family consists of several hypothetical proteins from plants. The function of this family is unknown.
Probab=87.09 E-value=3.4 Score=40.62 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=50.7
Q ss_pred EEEEee--e--cCCCeEEEEEcccccC---CCeeEEEEcCCcceeeecCCCcccccccccCCCCcceEEEeccCCCeEEE
Q 019376 31 CIYQTQ--I--CKSPTYLTLTWSKNLF---SHSLTIYAADSFSLTISLHPSTFSSFFRSRPGSGSKSIYLTQQHYQRIKL 103 (342)
Q Consensus 31 ~vY~t~--L--~g~~~litvTWsk~l~---g~sLsv~i~~~~s~k~~~kPw~~~~~fwkkkG~~SKsf~~~~~~~~~V~v 103 (342)
.+|.|+ + .|+..-|.|-=....- ...|.|.||.-..+.| |- +=||=|| +.++.+ ++..|+|
T Consensus 143 ~~~~Tka~F~e~G~~HeI~Iec~~~~~g~~dp~l~V~VDgk~v~~V--kr-----L~WkFRG--Nqti~v---dg~~V~V 210 (274)
T PF05910_consen 143 KVYSTKARFCEGGKEHEISIECGGETGGPKDPELWVSVDGKKVVQV--KR-----LRWKFRG--NQTIFV---DGLPVQV 210 (274)
T ss_pred EEEeeEEEEcCCCcEEEEEEEEeccCCCCCCceEEEEECCEEEEEE--EE-----eeecccC--ceEEEE---CCeEEEE
Confidence 566555 4 6666666665422223 3689999997533333 32 2588899 999999 9999999
Q ss_pred EecCCccccc
Q 019376 104 HWDFTRAQFT 113 (342)
Q Consensus 104 ~WDLs~Akf~ 113 (342)
+||+..==|+
T Consensus 211 ~WDVHdWlF~ 220 (274)
T PF05910_consen 211 FWDVHDWLFN 220 (274)
T ss_pred EEEhhhhhhc
Confidence 9999988886
No 4
>smart00282 LamG Laminin G domain.
Probab=81.46 E-value=3.5 Score=33.80 Aligned_cols=51 Identities=20% Similarity=0.324 Sum_probs=33.9
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeecc--ccccceEEEeCCcEE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAW--KFRGHERIYVDGIEV 229 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~W--kFRGNetI~vDG~~V 229 (342)
.++. |+.|.|.|+.. ++.+.+.|||+....++...= .+--+..|+|+|.|-
T Consensus 57 ~~~~dg~WH~v~i~~~-~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~l~iGG~p~ 110 (135)
T smart00282 57 TPLNDGQWHRVAVERN-GRRVTLSVDGENPVSGESPGGLTILNLDGPLYLGGLPE 110 (135)
T ss_pred eEeCCCCEEEEEEEEe-CCEEEEEECCCccccEECCCCceEEecCCCcEEccCCc
Confidence 5678 99999999998 568999999976554432210 011234467777653
No 5
>PF02210 Laminin_G_2: Laminin G domain; InterPro: IPR012680 Laminins are large heterotrimeric glycoproteins involved in basement membrane function []. The laminin globular (G) domain can be found in one to several copies in various laminin family members, including a large number of extracellular proteins. The C terminus of the laminin alpha chain contains a tandem repeat of five laminin G domains, which are critical for heparin-binding and cell attachment activity []. Laminin alpha4 is distributed in a variety of tissues including peripheral nerves, dorsal root ganglion, skeletal muscle and capillaries; in the neuromuscular junction, it is required for synaptic specialisation []. The structure of the laminin-G domain has been predicted to resemble that of pentraxin []. Laminin G domains can vary in their function, and a variety of binding functions have been ascribed to different LamG modules. For example, the laminin alpha1 and alpha2 chains each have five C-teminal laminin G domains, where only domains LG4 and LG5 contain binding sites for heparin, sulphatides and the cell surface receptor dystroglycan []. Laminin G-containing proteins appear to have a wide variety of roles in cell adhesion, signalling, migration, assembly and differentiation. This entry represents one subtype of laminin G domains, which is sometimes found in association with thrombospondin-type laminin G domains (IPR012679 from INTERPRO).; PDB: 3POY_A 3QCW_B 3R05_B 3ASI_A 3MW4_B 3MW3_A 1QU0_D 1DYK_A 1OKQ_A 3SH4_A ....
Probab=77.18 E-value=6 Score=31.17 Aligned_cols=48 Identities=19% Similarity=0.356 Sum_probs=38.3
Q ss_pred Ec-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccc---cccceEEEeCCcE
Q 019376 180 FL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWK---FRGHERIYVDGIE 228 (342)
Q Consensus 180 F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~Wk---FRGNetI~vDG~~ 228 (342)
+. |+.|.|.|... ++++.+.||++...+....... +-....|+++|.|
T Consensus 51 ~~dg~wh~v~i~~~-~~~~~l~Vd~~~~~~~~~~~~~~~~~~~~~~l~iGg~~ 102 (128)
T PF02210_consen 51 LNDGQWHKVSISRD-GNRVTLTVDGQSVSSESLPSSSSDSLDPDGSLYIGGLP 102 (128)
T ss_dssp STSSSEEEEEEEEE-TTEEEEEETTSEEEEEESSSTTHHCBESEEEEEESSTT
T ss_pred ccccceeEEEEEEe-eeeEEEEecCccceEEeccccceecccCCCCEEEeccc
Confidence 56 99999999998 4589999999999999888775 3344447777764
No 6
>PRK00051 hisI phosphoribosyl-AMP cyclohydrolase; Reviewed
Probab=70.27 E-value=13 Score=32.93 Aligned_cols=70 Identities=19% Similarity=0.321 Sum_probs=44.9
Q ss_pred CceEEEEEEC--ceEEEEeCCccHHHHHHhcccccccccceeeeeee-eeeeeeeeeeeeEEEcc---eeceEEEEecCC
Q 019376 121 SGFYIAISCN--ARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRR-EHVFGRKSYMSRAHFLG---SKHEIGIECSDG 194 (342)
Q Consensus 121 sgfYVAVv~d--~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRr-Ehv~G~~~y~TkA~F~G---~~HeI~Iec~~~ 194 (342)
.|-.-|||-| ..-||+||=|.+||+++|.... .+...||. ..+.-| -.=.| +..+|.++|+.+
T Consensus 12 ~GLipaivqd~~tg~VLMlaymn~eAl~~Tl~tg-----~~~y~SRSR~~lW~K------GetSG~~q~v~~i~~DCD~D 80 (125)
T PRK00051 12 DGLVPAIAQDAETGEVLMVAWMNEEALAKTLETG-----RAHYWSRSRQKLWRK------GETSGHVQKVHEVRLDCDGD 80 (125)
T ss_pred CCcEEEEEEECCCCCEEEEEEcCHHHHHHHHhcC-----cEEEEeCccCcccCC------CCCcCCeEEEEEEEecCCCC
Confidence 4788888887 5568999999999999987653 35555552 122111 00011 456899999954
Q ss_pred ceEEEEEc
Q 019376 195 GVLKVKVD 202 (342)
Q Consensus 195 g~L~V~VD 202 (342)
.|.+.|+
T Consensus 81 -~Ll~~V~ 87 (125)
T PRK00051 81 -AVLLKVE 87 (125)
T ss_pred -EEEEEEE
Confidence 5666554
No 7
>COG0139 HisI Phosphoribosyl-AMP cyclohydrolase [Amino acid transport and metabolism]
Probab=70.26 E-value=13 Score=32.39 Aligned_cols=71 Identities=23% Similarity=0.300 Sum_probs=47.6
Q ss_pred CceEEEEEECceE--EEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEcc---eeceEEEEecCCc
Q 019376 121 SGFYIAISCNARL--EFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFLG---SKHEIGIECSDGG 195 (342)
Q Consensus 121 sgfYVAVv~d~Ev--vLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~G---~~HeI~Iec~~~g 195 (342)
.|-+.|||-|.+- ||.||=|.+||+.||.... .+...||.-+ ..=+|-.=.| +.+||.++|+.+
T Consensus 16 ~gLvpaIvQd~~t~eVLMlaymN~eAl~kTleTg-----~~~y~SRSR~-----~lW~KGetSG~~q~v~~i~~DCD~D- 84 (111)
T COG0139 16 DGLVPAIVQDAETGEVLMLAYMNEEALAKTLETG-----EAHYYSRSRQ-----ELWTKGETSGHTQKVVEIRLDCDGD- 84 (111)
T ss_pred CCeEEEEEEecCCCcEEEEEecCHHHHHHHHhcC-----eEEEEEcchh-----hheccccccCceEEEEEEEcCCCCC-
Confidence 7889999987664 7999999999999987653 3555555322 1112222222 578999999954
Q ss_pred eEEEEEc
Q 019376 196 VLKVKVD 202 (342)
Q Consensus 196 ~L~V~VD 202 (342)
.|.+.|+
T Consensus 85 all~~V~ 91 (111)
T COG0139 85 ALLLLVE 91 (111)
T ss_pred EEEEEEE
Confidence 5666554
No 8
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=63.04 E-value=15 Score=31.57 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=30.1
Q ss_pred eeeEEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccc
Q 019376 175 MSRAHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWK 215 (342)
Q Consensus 175 ~TkA~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~Wk 215 (342)
..++.+. |+.|.|.|+|. ++.+.|.|||+.|+......=.
T Consensus 119 ~~~~~~~~~~W~~~~I~~~-g~~i~v~vnG~~v~~~~d~~~~ 159 (185)
T PF06439_consen 119 SVNVAIPPGEWNTVRIVVK-GNRITVWVNGKPVADFTDPSFP 159 (185)
T ss_dssp SS--S--TTSEEEEEEEEE-TTEEEEEETTEEEEEEETTSHH
T ss_pred cccccCCCCceEEEEEEEE-CCEEEEEECCEEEEEEEcCCCC
Confidence 3344455 99999999998 5589999999999998876544
No 9
>PF00054 Laminin_G_1: Laminin G domain; InterPro: IPR012679 Laminins are large heterotrimeric glycoproteins involved in basement membrane function []. The laminin globular (G) domain can be found in one to several copies in various laminin family members, which includes a large number of extracellular proteins. The C terminus of laminin alpha chain contains a tandem repeat of five laminin G domains, which are critical for heparin-binding and cell attachment activity []. Laminin alpha4 is distributed in a variety of tissues including peripheral nerves, dorsal root ganglion, skeletal muscle and capillaries; in the neuromuscular junction, it is required for synaptic specialisation []. The structure of the laminin-G domain has been predicted to resemble that of pentraxin []. Laminin G domains can vary in their function, and a variety of binding functions has been ascribed to different LamG modules. For example, the laminin alpha1 and alpha2 chains each has five C-teminal laminin G domains, where only domains LG4 and LG5 contain binding sites for heparin, sulphatides and the cell surface receptor dystroglycan []. Laminin G-containing proteins appear to have a wide variety of roles in cell adhesion, signalling, migration, assembly and differentiation. This entry represents one subtype of laminin G domains, which is sometimes found in association with thrombospondin-type laminin G domains (IPR012680 from INTERPRO).; PDB: 1OKQ_A 1DYK_A 2C5D_A 1H30_A 1LHW_A 1KDK_A 1LHU_A 1KDM_A 1LHO_A 1D2S_A ....
Probab=58.23 E-value=1.1e+02 Score=25.60 Aligned_cols=48 Identities=21% Similarity=0.306 Sum_probs=34.3
Q ss_pred Ec-ceeceEEEEecCCceEEEEEcCEEEEEEeee-cc--ccccceEEEeCCcE
Q 019376 180 FL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRL-AW--KFRGHERIYVDGIE 228 (342)
Q Consensus 180 F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL-~W--kFRGNetI~vDG~~ 228 (342)
+. |+.|.|.++-. .....++||+..++...-- .= ...-+..|+|.|+|
T Consensus 50 i~dg~wh~v~~~r~-~~~~~L~Vd~~~~~~~~s~~~~~~~l~~~~~lyvGG~p 101 (131)
T PF00054_consen 50 INDGKWHTVSVSRN-GRNGSLSVDGEEVVTGESPSGATQSLDVDGPLYVGGLP 101 (131)
T ss_dssp TTSSSEEEEEEEEE-TTEEEEEETTSEEEEEEECSSSSSSCEECSEEEESSSS
T ss_pred cCCCcceEEEEEEc-CcEEEEEECCccceeeecCCccccccccccCEEEccCC
Confidence 55 99999999987 4599999999998544332 11 12333449999998
No 10
>PF05506 DUF756: Domain of unknown function (DUF756); InterPro: IPR008475 This domain is found, normally as a tandem repeat, at the C terminus of bacterial phospholipase C proteins.; GO: 0004629 phospholipase C activity, 0016042 lipid catabolic process
Probab=58.19 E-value=64 Score=25.56 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=26.3
Q ss_pred EEEEeeeccccccceEEEeC-CcEEEEEEEe---eecccC
Q 019376 206 SLVIKRLAWKFRGHERIYVD-GIEVEFFWDV---FNWINN 241 (342)
Q Consensus 206 vl~VKRL~WkFRGNetI~vD-G~~VeV~WDV---HdWlF~ 241 (342)
.++|....=.-.+.+++.|. |..+++.||+ |+|+.=
T Consensus 35 ~~~v~~~~y~~~~~~~~~v~ag~~~~~~w~l~~s~gwYDl 74 (89)
T PF05506_consen 35 TFTVYDNAYGGGGPWTYTVAAGQTVSLTWPLAASGGWYDL 74 (89)
T ss_pred EEEEEeCCcCCCCCEEEEECCCCEEEEEEeecCCCCcEEE
Confidence 44555433344567888886 8999999999 999873
No 11
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology [].; GO: 0043066 negative regulation of apoptosis; PDB: 3MX7_A 2KW1_A 2KD2_A.
Probab=56.53 E-value=60 Score=30.12 Aligned_cols=41 Identities=29% Similarity=0.575 Sum_probs=27.9
Q ss_pred ceeceEEEEec-CCceEEEEEcCEEEEEEeeeccccc--cceEEEeC
Q 019376 182 GSKHEIGIECS-DGGVLKVKVDGETSLVIKRLAWKFR--GHERIYVD 225 (342)
Q Consensus 182 G~~HeI~Iec~-~~g~L~V~VDgk~vl~VKRL~WkFR--GNetI~vD 225 (342)
...|+|.+|=+ ..|..-|+||||.+++ | .|.|+ |-++-.|+
T Consensus 15 d~~h~IefeHgtttGkrvI~VDGkei~r-~--~wmfklvg~e~F~ig 58 (177)
T PF06905_consen 15 DGVHKIEFEHGTTTGKRVIKVDGKEIVR-R--DWMFKLVGKETFTIG 58 (177)
T ss_dssp TEEEEEEEEE-TTT--EEEEETTEEEEE-E-----S---EEEEEEET
T ss_pred CCEEEEEEEeCCccCeEEEEECCcEEEE-e--cceeeeCcccEEEEC
Confidence 88999999975 3569999999998776 3 47766 77777777
No 12
>PF14099 Polysacc_lyase: Polysaccharide lyase; PDB: 3ILR_A 3IKW_A 3INA_A 3IMN_A 3IN9_A 2ZZJ_A.
Probab=44.35 E-value=24 Score=31.75 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=37.0
Q ss_pred EEEc-ceeceEEEEec----CCceEEEEEcCEEEEEEeeeccccccceEEEeCCcEEEEEEEeeecc
Q 019376 178 AHFL-GSKHEIGIECS----DGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGIEVEFFWDVFNWI 239 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~----~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~~VeV~WDVHdWl 239 (342)
+.+. |+.|+|+|+.. ..|.|.|.+|||.|+.. +| .++.-++....+=|=++-+.
T Consensus 147 ~~~~~G~W~~~~i~~~~s~~~~G~~~vw~nG~~v~~~-------~g-~~~~~~~~~~y~K~GiYr~~ 205 (224)
T PF14099_consen 147 GPVERGKWHDFVIHVKWSPDSDGFLEVWLNGKLVVDY-------KG-PTGYNDDRGPYFKFGIYRSG 205 (224)
T ss_dssp CCS-TTSEEEEEEEEEE-CCCTEEEEEEECCEECCEE-------EE-EECECCSSEEEEEEEEEEHC
T ss_pred CCcCCCcEEEEEEEEEECCCCCEEEEEEECCEEEEEE-------eC-CceeCCCCcceeEEEEECCC
Confidence 3444 99999999974 24689999999988875 45 55555555666666666443
No 13
>PRK02759 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; Reviewed
Probab=40.74 E-value=68 Score=30.48 Aligned_cols=70 Identities=23% Similarity=0.355 Sum_probs=44.3
Q ss_pred CceEEEEEECc--eEEEEeCCccHHHHHHhcccccccccceeeeeee-eeeeeeeeeeeeEEEcc---eeceEEEEecCC
Q 019376 121 SGFYIAISCNA--RLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRR-EHVFGRKSYMSRAHFLG---SKHEIGIECSDG 194 (342)
Q Consensus 121 sgfYVAVv~d~--EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRr-Ehv~G~~~y~TkA~F~G---~~HeI~Iec~~~ 194 (342)
.|-.-|||-|. --||+||=|.+||+.+|.... .+...||. ..+.-| -.=.| +..+|.++|+.+
T Consensus 14 ~gLip~ivqd~~tg~vLml~ymn~eal~~Tl~tg-----~~~~~SRSr~~lW~K------GetSG~~q~v~~i~~DCD~D 82 (203)
T PRK02759 14 DGLIPAIVQDALTGEVLMLGYMNREALEKTLETG-----EVTFFSRSKQRLWTK------GETSGNTQKVVSIRLDCDND 82 (203)
T ss_pred CCcEEEEEEECCCCCEEEEEecCHHHHHHHHhcC-----cEEEEeCCCCcccCC------CCCCCCeEEEEEEEecCCCC
Confidence 36777888774 457999999999999987653 35555552 222111 00011 456899999954
Q ss_pred ceEEEEEc
Q 019376 195 GVLKVKVD 202 (342)
Q Consensus 195 g~L~V~VD 202 (342)
.|.|.|+
T Consensus 83 -~ll~~V~ 89 (203)
T PRK02759 83 -TLLVLVE 89 (203)
T ss_pred -eEEEEEE
Confidence 5666554
No 14
>smart00210 TSPN Thrombospondin N-terminal -like domains. Heparin-binding and cell adhesion domain of thrombospondin
Probab=39.56 E-value=43 Score=29.91 Aligned_cols=43 Identities=23% Similarity=0.181 Sum_probs=32.2
Q ss_pred cceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCCc
Q 019376 181 LGSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGI 227 (342)
Q Consensus 181 ~G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~ 227 (342)
.|+.|-|.|.... ..+.+.||++.+-.+. |...+. +.+..+|.
T Consensus 116 dg~WH~lal~V~~-~~v~LyvDC~~~~~~~-l~~~~~--~~~~~~g~ 158 (184)
T smart00210 116 DGQWHKLALSVSG-SSATLYVDCNEIDSRP-LDRPGQ--PPIDTDGI 158 (184)
T ss_pred cCCceEEEEEEeC-CEEEEEECCcccccee-cCCccc--ccccccce
Confidence 3999999999984 4899999999876654 776654 44555554
No 15
>PLN02346 histidine biosynthesis bifunctional protein hisIE
Probab=37.50 E-value=67 Score=31.85 Aligned_cols=70 Identities=17% Similarity=0.215 Sum_probs=42.2
Q ss_pred ceEEEEEEC--ceEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEcc---eeceEEEEecCCce
Q 019376 122 GFYIAISCN--ARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFLG---SKHEIGIECSDGGV 196 (342)
Q Consensus 122 gfYVAVv~d--~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~G---~~HeI~Iec~~~g~ 196 (342)
|---|||.| ..-||+||=|.+||+.+|-... .+...||.=+- .=+|-.=.| +.++|.++|+.+ .
T Consensus 53 gLipaivQd~~tg~VLml~ymn~eal~~Tl~tg-----~~~y~SRSR~~-----LW~KGetSG~~q~v~~i~~DCD~D-~ 121 (271)
T PLN02346 53 GLAVAIAQNVDTGAILMQGFANREAISATISSR-----KATFYSRSRSG-----LWTKGETSGNFINVHDIYLDCDRD-S 121 (271)
T ss_pred CCEEEEEEECCCCCEEEEEecCHHHHHHHHhcC-----cEEEEeCCCCc-----cccCCCCcCCeEEEEEEEecCCCC-e
Confidence 555556654 4578999999999999987653 34445543111 001111111 567999999954 5
Q ss_pred EEEEEc
Q 019376 197 LKVKVD 202 (342)
Q Consensus 197 L~V~VD 202 (342)
|.|.|+
T Consensus 122 ll~~V~ 127 (271)
T PLN02346 122 IIYLGT 127 (271)
T ss_pred EEEEEE
Confidence 666554
No 16
>PF07691 PA14: PA14 domain; InterPro: IPR011658 The PA14 domain forms an insert in bacterial beta-glucosidases, other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins and bacterial toxins, including anthrax protective antigen (PA). The domain also occurs in a Dictyostelium pre-spore cell-inducing factor Psi and in fibrocystin, the mammalian protein whose mutation leads to polycystic kidney and hepatic disease. The crystal structure of PA shows that this domain (named PA14 after its location in the PA20 pro-peptide) has a beta-barrel structure. The PA14 domain sequence suggests a binding function, rather than a catalytic role. The PA14 domain distribution is compatible with carbohydrate binding [].; PDB: 2XVG_A 2XVK_A 2XVL_A 2XJU_A 2XJT_A 2XJQ_A 2XJS_A 2XJV_A 2XJP_A 2XJR_A ....
Probab=35.41 E-value=1.7e+02 Score=23.92 Aligned_cols=57 Identities=19% Similarity=0.369 Sum_probs=30.5
Q ss_pred CCCceE-EEEEECceEEEEeCCccHHHHHHhcccccccccceeeeeeeee---ee--eeeeeeeeEEEc-ceeceEEEEe
Q 019376 119 PDSGFY-IAISCNARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREH---VF--GRKSYMSRAHFL-GSKHEIGIEC 191 (342)
Q Consensus 119 P~sgfY-VAVv~d~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEh---v~--G~~~y~TkA~F~-G~~HeI~Iec 191 (342)
|..|-| +.+-+|+..-|.++|.. ++-..+.+ .+ +.....++..+. |+.|+|.|++
T Consensus 57 ~~~G~y~f~~~~~d~~~l~idg~~------------------vid~~~~~~~~~~~~~~~~~~~~v~l~~g~~y~i~i~y 118 (145)
T PF07691_consen 57 PETGTYTFSLTSDDGARLWIDGKL------------------VIDNWGNQGGGFFNSGPSSTSGTVTLEAGGKYPIRIEY 118 (145)
T ss_dssp SSSEEEEEEEEESSEEEEEETTEE------------------EEECSCTTTSTTTTTSBCCEEEEEEE-TT-EEEEEEEE
T ss_pred ccCceEEEEEEecccEEEEECCEE------------------EEcCCccccccccccccceEEEEEEeeCCeeEEEEEEE
Confidence 344544 66778888888888721 00000000 01 123344455555 9999999997
Q ss_pred cC
Q 019376 192 SD 193 (342)
Q Consensus 192 ~~ 193 (342)
..
T Consensus 119 ~~ 120 (145)
T PF07691_consen 119 FN 120 (145)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 17
>COG1873 Protein implicated in RNA metabolism, contains PRC-barrel domain [General function prediction only]
Probab=35.40 E-value=56 Score=26.81 Aligned_cols=38 Identities=13% Similarity=0.339 Sum_probs=30.3
Q ss_pred eeeeeeeeeeeeeEEEcceeceEEEEecCCc--eEEEEEc
Q 019376 165 REHVFGRKSYMSRAHFLGSKHEIGIECSDGG--VLKVKVD 202 (342)
Q Consensus 165 rEhv~G~~~y~TkA~F~G~~HeI~Iec~~~g--~L~V~VD 202 (342)
-+.++|+..|++++++.|+.-||.|+...+. -|-|...
T Consensus 8 ~s~l~gk~V~~~~G~~vG~V~dv~ld~~~g~i~~l~v~~~ 47 (87)
T COG1873 8 LSELLGKEVITNDGKYVGTVSDVVLDIKEGKITGLLVIPT 47 (87)
T ss_pred HHHhcCcEEEcCCCeEEEEEEeEEEEccCCcEEEEEEecC
Confidence 3457899999999999999999999998654 4444444
No 18
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A ....
Probab=33.24 E-value=76 Score=25.18 Aligned_cols=61 Identities=26% Similarity=0.455 Sum_probs=37.9
Q ss_pred ceEEEEEECceEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCceEEEE
Q 019376 122 GFYIAISCNARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGVLKVK 200 (342)
Q Consensus 122 gfYVAVv~d~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~L~V~ 200 (342)
+|-+.+--++.+.+.+++... +...+.+...+. ++.|.|.+-++ ++.+.+.
T Consensus 51 ~~~l~~~~~~~l~~~~~~~~~---------------------------~~~~~~~~~~~~~~~W~~l~~~~~-~~~~~ly 102 (157)
T PF13385_consen 51 GFGLFINNNGRLRFYIGNGGG---------------------------GNYSFSSDSNLPDNKWHHLALTYD-GSTVTLY 102 (157)
T ss_dssp EEEEEEETTSEEEEEETTSEE---------------------------ESS-EE-BS---TT-EEEEEEEEE-TTEEEEE
T ss_pred EEEEEEECCCEEEEEEeCCCc---------------------------eeEEEecCcccCCCCEEEEEEEEE-CCeEEEE
Confidence 566666556777777776321 111333445565 99999999998 5689999
Q ss_pred EcCEEEEEEe
Q 019376 201 VDGETSLVIK 210 (342)
Q Consensus 201 VDgk~vl~VK 210 (342)
|||+.+-...
T Consensus 103 vnG~~~~~~~ 112 (157)
T PF13385_consen 103 VNGELVGSST 112 (157)
T ss_dssp ETTEEETTCT
T ss_pred ECCEEEEeEe
Confidence 9999876543
No 19
>smart00216 VWD von Willebrand factor (vWF) type D domain. Von Willebrand factor contains several type D domains: D1 and D2 are present within the N-terminal propeptide whereas the remaining D domains are required for multimerisation.
Probab=29.69 E-value=3.5e+02 Score=22.94 Aligned_cols=40 Identities=15% Similarity=0.212 Sum_probs=22.1
Q ss_pred eEEEEEcCEEEEE-E--eeeccccc--cceEEEeCCcEEEEEEEe
Q 019376 196 VLKVKVDGETSLV-I--KRLAWKFR--GHERIYVDGIEVEFFWDV 235 (342)
Q Consensus 196 ~L~V~VDgk~vl~-V--KRL~WkFR--GNetI~vDG~~VeV~WDV 235 (342)
.+.|.|||+.+-. . ....-.++ |.-.|..-+..|+|+||=
T Consensus 82 ~~~v~vng~~v~~p~~~~~~~v~~~~~~~~~v~~~~~gl~v~~dg 126 (162)
T smart00216 82 NGTVTVNGQQVSLPYKTSDGSIQIRSSGGYVVVITSLGLQVTFDG 126 (162)
T ss_pred CCEEEECCEEeeCCcCcCCceEEEEECceEEEEECCCCEEEEECC
Confidence 5789999986321 1 11111122 444455556777889883
No 20
>TIGR02148 Fibro_Slime fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain
Probab=26.95 E-value=1.6e+02 Score=24.75 Aligned_cols=23 Identities=13% Similarity=0.029 Sum_probs=18.9
Q ss_pred EEEecCCceEEEEEcCEEEEEEe
Q 019376 188 GIECSDGGVLKVKVDGETSLVIK 210 (342)
Q Consensus 188 ~Iec~~~g~L~V~VDgk~vl~VK 210 (342)
..+-.++..|||-||||.|+-+=
T Consensus 21 ~F~F~GDDDvWVFIn~kLv~DlG 43 (90)
T TIGR02148 21 YFEFRGDDDVWVFINNKLVVDIG 43 (90)
T ss_pred EEEEEcCCeEEEEECCEEEEEcc
Confidence 56677777999999999998764
No 21
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=25.80 E-value=59 Score=34.76 Aligned_cols=63 Identities=21% Similarity=0.384 Sum_probs=42.8
Q ss_pred EEcCEEEEE-------EeeeccccccceEEEeCCcEEEEEEEee------------------ecccCCCCCccCCCCCcc
Q 019376 200 KVDGETSLV-------IKRLAWKFRGHERIYVDGIEVEFFWDVF------------------NWINNNGSAAAAGTGNGH 254 (342)
Q Consensus 200 ~VDgk~vl~-------VKRL~WkFRGNetI~vDG~~VeV~WDVH------------------dWlF~~~~~~~~~~~~g~ 254 (342)
..||..+.- |-+|+||=+||..+--+-..+-|+||+| ||.-+.. =+..+.-.
T Consensus 263 ~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~---F~ts~td~ 339 (524)
T KOG0273|consen 263 NKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDE---FATSSTDG 339 (524)
T ss_pred ecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCce---EeecCCCc
Confidence 456655432 5689999999998887667788999994 4544321 01223457
Q ss_pred eEEEEEecCCC
Q 019376 255 GVFIFQFGEGG 265 (342)
Q Consensus 255 AVFmFr~~~~~ 265 (342)
+.|++|.+...
T Consensus 340 ~i~V~kv~~~~ 350 (524)
T KOG0273|consen 340 CIHVCKVGEDR 350 (524)
T ss_pred eEEEEEecCCC
Confidence 89999988664
No 22
>PF07691 PA14: PA14 domain; InterPro: IPR011658 The PA14 domain forms an insert in bacterial beta-glucosidases, other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins and bacterial toxins, including anthrax protective antigen (PA). The domain also occurs in a Dictyostelium pre-spore cell-inducing factor Psi and in fibrocystin, the mammalian protein whose mutation leads to polycystic kidney and hepatic disease. The crystal structure of PA shows that this domain (named PA14 after its location in the PA20 pro-peptide) has a beta-barrel structure. The PA14 domain sequence suggests a binding function, rather than a catalytic role. The PA14 domain distribution is compatible with carbohydrate binding [].; PDB: 2XVG_A 2XVK_A 2XVL_A 2XJU_A 2XJT_A 2XJQ_A 2XJS_A 2XJV_A 2XJP_A 2XJR_A ....
Probab=23.61 E-value=1.8e+02 Score=23.75 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=22.7
Q ss_pred ceeceEEEEecCCceEEEEEcCEEEEEEeeecc
Q 019376 182 GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAW 214 (342)
Q Consensus 182 G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~W 214 (342)
--.|.+.+.++. ...+.|||+.|+.-..=+|
T Consensus 59 ~G~y~f~~~~~d--~~~l~idg~~vid~~~~~~ 89 (145)
T PF07691_consen 59 TGTYTFSLTSDD--GARLWIDGKLVIDNWGNQG 89 (145)
T ss_dssp SEEEEEEEEESS--EEEEEETTEEEEECSCTTT
T ss_pred CceEEEEEEecc--cEEEEECCEEEEcCCcccc
Confidence 345888888764 4555699999998886555
No 23
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
Probab=21.77 E-value=2e+02 Score=26.14 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=27.8
Q ss_pred EcceeceEEEEecCCceEEEEEcCEEEEEEeeec
Q 019376 180 FLGSKHEIGIECSDGGVLKVKVDGETSLVIKRLA 213 (342)
Q Consensus 180 F~G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~ 213 (342)
.....|...||-.. +.|.+.|||+.+..+++-.
T Consensus 156 ~~~~fHtY~~~W~p-~~i~~yvDG~~v~~~~~~~ 188 (235)
T cd08023 156 LSDDFHTYAVEWTP-DKITFYVDGKLYFTYTNPN 188 (235)
T ss_pred cCCCcEEEEEEEEC-CEEEEEECCEEEEEEcccc
Confidence 34889999999874 5899999999999998754
No 24
>KOG3516 consensus Neurexin IV [Signal transduction mechanisms]
Probab=21.07 E-value=2e+02 Score=34.11 Aligned_cols=48 Identities=23% Similarity=0.359 Sum_probs=36.5
Q ss_pred ceeceEEEEecCCceEEEEEcCEEE--------EEEee-ecccccc--------------------ceEEEeCCcEEE
Q 019376 182 GSKHEIGIECSDGGVLKVKVDGETS--------LVIKR-LAWKFRG--------------------HERIYVDGIEVE 230 (342)
Q Consensus 182 G~~HeI~Iec~~~g~L~V~VDgk~v--------l~VKR-L~WkFRG--------------------NetI~vDG~~Ve 230 (342)
|+.|++++-.. .+.|.+.||+..+ +||++ ..--|=| -|+|.|||..|+
T Consensus 446 G~WHsv~~~ak-~n~~~~~iDd~~~~~~~~~~p~~V~tg~tY~fgg~~~~~~~~~~~~~~~~f~GCmrli~vd~~~~~ 522 (1306)
T KOG3516|consen 446 GAWHSVSFNAK-KNRLVLMIDDGEAEIAPDSKPLQVYTGTTYYFGGCPDKFNSWQCASPIKGFQGCMRLIKVDGQLKD 522 (1306)
T ss_pred CceEEEEEEee-cceeEEEEcCcccccccCCccEEEEeCCeeEeccccccccchhhccccccccceeEEEEECCeEee
Confidence 99999999876 5699999999988 66654 3333333 267999998877
No 25
>cd00070 GLECT Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.
Probab=20.58 E-value=1.8e+02 Score=24.31 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=25.3
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVI 209 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~V 209 (342)
--|. |+..+|.|.|. .....|.|||+.+.+-
T Consensus 72 ~pf~~g~~F~l~i~~~-~~~f~i~vng~~~~~F 103 (127)
T cd00070 72 FPFQPGQPFELTILVE-EDKFQIFVNGQHFFSF 103 (127)
T ss_pred CCCCCCCeEEEEEEEc-CCEEEEEECCEeEEEe
Confidence 3455 99999999998 5589999999977554
No 26
>smart00560 LamGL LamG-like jellyroll fold domain.
Probab=20.48 E-value=1.9e+02 Score=24.16 Aligned_cols=28 Identities=21% Similarity=0.228 Sum_probs=23.5
Q ss_pred ceeceEEEEecCC-ceEEEEEcCEEEEEE
Q 019376 182 GSKHEIGIECSDG-GVLKVKVDGETSLVI 209 (342)
Q Consensus 182 G~~HeI~Iec~~~-g~L~V~VDgk~vl~V 209 (342)
|+.|.|.+-++.. ++|.+.|||+.+-..
T Consensus 61 ~~W~hva~v~d~~~g~~~lYvnG~~~~~~ 89 (133)
T smart00560 61 GVWVHLAGVYDGGAGKLSLYVNGVEVATS 89 (133)
T ss_pred CCEEEEEEEEECCCCeEEEEECCEEcccc
Confidence 9999999999854 599999999887544
No 27
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=20.31 E-value=1.8e+02 Score=24.50 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=27.3
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEee
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKR 211 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKR 211 (342)
--|. |+.-+|.|.|. ..+..|.|||+.+.+-+.
T Consensus 71 ~Pf~~g~~F~l~i~~~-~~~f~i~vng~~~~~f~~ 104 (128)
T smart00276 71 FPFQPGQPFDLTIIVQ-PDHFQIFVNGVHITTFPH 104 (128)
T ss_pred CCCCCCCEEEEEEEEc-CCEEEEEECCEeEEEecC
Confidence 4465 99999999998 458999999999887643
Done!