Query 019376
Match_columns 342
No_of_seqs 117 out of 138
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 15:07:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pz7_A Agrin; structural prote 81.7 8.1 0.00028 33.1 9.3 50 178-228 104-156 (204)
2 1d2s_A SHBG, sex hormone-bindi 79.0 2.7 9.4E-05 35.4 5.3 78 120-228 51-129 (170)
3 3gne_A Val-1; alginate lyase, 77.3 2 6.8E-05 40.4 4.2 51 179-232 159-220 (252)
4 2jd4_A Laminin subunit alpha-1 76.2 7.7 0.00026 36.1 7.9 77 121-228 69-150 (383)
5 1f5f_A SHBG, sex hormone-bindi 76.1 4.3 0.00015 35.0 5.8 80 120-228 63-147 (205)
6 3asi_A Neurexin-1-alpha; beta- 75.6 10 0.00035 35.8 8.7 52 178-229 82-134 (410)
7 3v64_A Low-density lipoprotein 75.4 15 0.0005 31.3 8.9 50 178-228 91-143 (191)
8 1h30_A GAS6, growth-arrest-spe 73.5 22 0.00075 33.9 10.5 79 120-229 86-172 (422)
9 3sh4_A LG3 peptide; actin disa 69.5 6.5 0.00022 33.7 5.3 51 177-228 89-142 (195)
10 3pve_A Agrin, AGRN protein; mR 68.7 16 0.00055 30.9 7.6 48 178-228 91-143 (189)
11 1dyk_A Laminin alpha 2 chain; 67.5 23 0.0008 33.2 9.1 60 120-210 82-144 (394)
12 3bod_A Neurexin-1-alpha; neure 61.6 7 0.00024 33.0 3.9 51 178-229 86-140 (178)
13 2r16_A Neurexin-1-alpha; beta- 59.9 35 0.0012 28.7 8.0 59 120-209 52-113 (182)
14 2zzj_A Glucuronan lyase A; bet 56.8 23 0.00079 33.0 6.7 41 172-212 138-183 (238)
15 4b1m_A Levanase; hydrolase, CB 56.4 13 0.00045 31.9 4.8 29 182-211 131-159 (185)
16 3zr5_A Galactocerebrosidase; h 54.8 35 0.0012 35.6 8.5 35 179-214 594-629 (656)
17 1dyk_A Laminin alpha 2 chain; 53.3 15 0.00052 34.5 5.1 50 179-229 291-343 (394)
18 2jd4_A Laminin subunit alpha-1 48.8 22 0.00077 32.9 5.4 48 180-228 280-330 (383)
19 3asi_A Neurexin-1-alpha; beta- 47.9 11 0.00038 35.6 3.2 50 178-228 306-359 (410)
20 3qcw_A Neurexin-1-alpha; synap 46.0 69 0.0024 35.2 9.4 53 177-229 913-966 (1245)
21 2h0b_A Neurexin-1-alpha; B-san 45.6 23 0.0008 29.5 4.5 50 178-228 84-136 (184)
22 1a78_A Galectin-1; S-lectin, c 43.8 31 0.0011 28.4 4.9 49 179-231 79-128 (134)
23 2r1b_A Neurexin-1-beta, neurex 43.3 16 0.00056 32.1 3.4 30 178-208 92-122 (220)
24 2wjs_A Laminin subunit alpha-2 39.7 1.6E+02 0.0055 29.1 10.3 26 177-203 279-305 (608)
25 1zps_A PRA-CH, phosphoribosyl- 38.3 23 0.0008 30.6 3.4 71 121-202 21-96 (138)
26 1p9k_A ORF, hypothetical prote 35.9 16 0.00054 27.3 1.8 30 199-231 48-77 (79)
27 4azz_A Levanase; hydrolase; 1. 41.8 7.8 0.00027 32.3 0.0 29 182-211 110-138 (172)
28 2r1d_A Neurexin-1-beta, neurex 35.1 29 0.001 30.7 3.7 49 179-228 121-173 (226)
29 1iby_A Nitrosocyanin; RED copp 29.8 1.8E+02 0.0063 22.1 7.6 44 199-242 18-66 (112)
30 2zhn_A Galectin-9; beta sandwi 29.3 83 0.0028 26.2 5.3 46 179-226 92-138 (148)
31 2wjs_A Laminin subunit alpha-2 27.9 33 0.0011 34.1 3.0 51 177-229 464-516 (608)
32 3vkl_A Galectin-8; beta-sandwi 27.5 1.2E+02 0.0042 28.1 6.7 56 179-238 234-291 (291)
33 2k54_A Protein ATU0742; protei 27.2 1.4E+02 0.0048 22.4 6.0 16 225-240 103-120 (123)
34 2d6m_A Galectin-9, lectin, gal 23.3 1.2E+02 0.0041 25.6 5.3 47 179-227 93-140 (159)
35 3ap9_A Galectin-8; beta-sandwi 22.9 1.3E+02 0.0043 25.3 5.3 46 179-226 96-142 (154)
36 3mx7_A FAS apoptotic inhibitor 21.4 3.1E+02 0.011 21.9 7.0 48 181-231 13-65 (90)
37 3zyp_A CIP1; metal binding pro 21.1 63 0.0022 28.1 3.2 32 179-210 132-164 (218)
38 1g86_A Charcot-leyden crystal 20.6 1.5E+02 0.005 24.5 5.2 47 179-227 82-129 (142)
39 2con_A RUH-035 protein, NIN on 20.4 20 0.00067 28.2 -0.2 19 202-220 51-71 (79)
No 1
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=81.65 E-value=8.1 Score=33.14 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=32.4
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeee--ccccccceEEEeCCcE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRL--AWKFRGHERIYVDGIE 228 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL--~WkFRGNetI~vDG~~ 228 (342)
..+. |+.|.|.|+-. +..+.+.||++......-. .-.+--+..++|+|+|
T Consensus 104 ~~lnDg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p 156 (204)
T 1pz7_A 104 VPINTNHWTHIKAYRV-QREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGME 156 (204)
T ss_dssp EECCSSSCEEEEEEEE-TTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCS
T ss_pred cccCCCCeEEEEEEEe-CCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCC
Confidence 4567 99999999987 4589999999875543311 0011123457777764
No 2
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=78.99 E-value=2.7 Score=35.44 Aligned_cols=78 Identities=18% Similarity=0.294 Sum_probs=51.7
Q ss_pred CCceEEEEEECceEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCceEE
Q 019376 120 DSGFYIAISCNARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGVLK 198 (342)
Q Consensus 120 ~sgfYVAVv~d~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~L~ 198 (342)
-.+|...-+.|+.+.|.+.- . . ..+ .-.+..++. |+.|.|.|+-. +..+.
T Consensus 51 ~~df~~l~L~~G~l~~~~~~-g-------------~--~~~------------~~~s~~~vnDG~WH~V~v~~~-~~~~~ 101 (170)
T 1d2s_A 51 KDDWFMLGLRDGRPEIQLHN-H-------------W--AQL------------TVGAGPRLDDGRWHQVEVKME-GDSVL 101 (170)
T ss_dssp TTEEEEEEEETTEEEEEEES-S-------------S--CEE------------EEECSCCCCSSSCEEEEEEEE-TTEEE
T ss_pred CCCEEEEEEeCCEEEEEEEC-C-------------C--ceE------------EEeCCCccCCCCCEEEEEEEe-CCEEE
Confidence 35788878889999887621 0 0 011 012234567 99999999987 45899
Q ss_pred EEEcCEEEEEEeeeccccccceEEEeCCcE
Q 019376 199 VKVDGETSLVIKRLAWKFRGHERIYVDGIE 228 (342)
Q Consensus 199 V~VDgk~vl~VKRL~WkFRGNetI~vDG~~ 228 (342)
+.|||+.+..+..+.- .- ...|+|+|+|
T Consensus 102 L~VD~~~~~~~~~~~~-l~-~~~lylGG~p 129 (170)
T 1d2s_A 102 LEVDGEEVLRLRQVSG-HP-IMRIALGGLL 129 (170)
T ss_dssp EEETTEEEEEETTCCC-CC-EEEEEESSCS
T ss_pred EEECCeeeeeeccCCC-cc-cccEEEECcc
Confidence 9999999887765431 10 2458888876
No 3
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=77.26 E-value=2 Score=40.40 Aligned_cols=51 Identities=20% Similarity=0.377 Sum_probs=40.2
Q ss_pred EEc-ceeceEEEEec--C--------CceEEEEEcCEEEEEEeeeccccccceEEEeCCcEEEEE
Q 019376 179 HFL-GSKHEIGIECS--D--------GGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGIEVEFF 232 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~--~--------~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~~VeV~ 232 (342)
+|. |+.|.|.+.+. + +|++.|.|||+.|+ ...|+|. .+..+.|+|+..+.|
T Consensus 159 ~f~~G~W~~V~q~VkLNT~~~G~g~aDG~v~v~VNG~~v~-~~~i~~r--~~~~~~I~gi~fsTF 220 (252)
T 3gne_A 159 ALKYDVWNRIEIGTKMNTFKNGIPQLDGESYVIVNGKKEV-LKRINWS--RSPDLLISRFDWNTF 220 (252)
T ss_dssp CSCBTSCEEEEEEEECCCEETTEECSCEEEEEEETTEEEE-EEEECCC--SSTTCCEEEEEEEEE
T ss_pred eEcCCceEEEEEEEEcCCCCCCCccCCceEEEEECCEEEE-ECCEEEE--ecCCccEeEEEEEEE
Confidence 566 99999988865 2 23999999999997 7888775 666677888877765
No 4
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=76.21 E-value=7.7 Score=36.12 Aligned_cols=77 Identities=19% Similarity=0.276 Sum_probs=48.1
Q ss_pred CceEEEEEECceEEEEe--CCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCceE
Q 019376 121 SGFYIAISCNARLEFFL--GDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGVL 197 (342)
Q Consensus 121 sgfYVAVv~d~EvvLlL--GDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~L 197 (342)
.+|+..-+.|+.+.|.+ |+.. ..+ .+...+. |+.|.|.|+-. +..+
T Consensus 69 ~d~~~l~L~~G~l~~~~~~g~~~-----------------~~~-------------~~~~~~~Dg~WH~V~v~r~-~~~~ 117 (383)
T 2jd4_A 69 MDYATLQLQEGRLHFMFDLGKGR-----------------TKV-------------SHPALLSDGKWHTVKTEYI-KRKA 117 (383)
T ss_dssp SSEEEEEEETTEEEEEEECSSCE-----------------EEE-------------ECCCCCTTSSCEEEEEEEE-TTEE
T ss_pred CcEEEEEEECCEEEEEEECCCCe-----------------EEE-------------eCcceecCCCcEEEEEEEe-CCEE
Confidence 56777777899998875 5511 111 1122355 99999999987 4589
Q ss_pred EEEEcCEEEEEEeee--ccccccceEEEeCCcE
Q 019376 198 KVKVDGETSLVIKRL--AWKFRGHERIYVDGIE 228 (342)
Q Consensus 198 ~V~VDgk~vl~VKRL--~WkFRGNetI~vDG~~ 228 (342)
.+.|||+........ .-.+.-+..|+|+|+|
T Consensus 118 ~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p 150 (383)
T 2jd4_A 118 FMTVDGQESPSVTVVGKATTLDVERKLYLGGLP 150 (383)
T ss_dssp EEEETTEECCCEECCSSCCCCCCCSEEEESSCC
T ss_pred EEEEcCccccceecCCCcceecCCCCeEEeccC
Confidence 999999876554321 1112223456777665
No 5
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=76.14 E-value=4.3 Score=35.03 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=51.8
Q ss_pred CCceEEEEEECceEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCceEE
Q 019376 120 DSGFYIAISCNARLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGVLK 198 (342)
Q Consensus 120 ~sgfYVAVv~d~EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~L~ 198 (342)
-.+|...-+.|+.+.|.+---. ..+. -.+..++. |+.|.|.|+-. +..+.
T Consensus 63 ~~d~~~l~L~~G~l~~~~~~g~----------------~~~~------------~~s~~~vnDG~WH~V~v~r~-~~~~~ 113 (205)
T 1f5f_A 63 KDDWFMLGLRDGRPEIQLHNHW----------------AQLT------------VGAGPRLDDGRWHQVEVKME-GDSVL 113 (205)
T ss_dssp TTEEEEEEEETTEEEEEEESSS----------------CEEE------------EECSCCCCSSSCEEEEEEEE-TTEEE
T ss_pred CCCEEEEEEECCEEEEEEECCC----------------ceEE------------EecCCccCCCCCEEEEEEEe-CCEEE
Confidence 4578887888999887653200 0110 12234567 99999999987 45899
Q ss_pred EEEcCEEEEEEeeec-c--cccc-ceEEEeCCcE
Q 019376 199 VKVDGETSLVIKRLA-W--KFRG-HERIYVDGIE 228 (342)
Q Consensus 199 V~VDgk~vl~VKRL~-W--kFRG-NetI~vDG~~ 228 (342)
+.|||..+..+.++. - +.-. +..|+|.|+|
T Consensus 114 L~VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p 147 (205)
T 1f5f_A 114 LEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLL 147 (205)
T ss_dssp EEETTEEEEEECSCCCCC----CCEEEEEESSCS
T ss_pred EEECCeeeeeeeccCCCcccccCCCceEEEeCcc
Confidence 999999988775431 1 1122 2458888876
No 6
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=75.63 E-value=10 Score=35.84 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=35.5
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCCcEE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGIEV 229 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~~V 229 (342)
.++. |+.|.|.|+-.....+.+.||++.+.++-.-.-.+.-+..++|+|+|-
T Consensus 82 ~~vnDg~WH~V~v~r~~~~~~~l~VD~~~~~~~~~~~~~l~~~~~lyvGG~p~ 134 (410)
T 3asi_A 82 KPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAK 134 (410)
T ss_dssp SCSCSSSCEEEEEEECTTCEEEEEETTEEEEEECTTCCCCCBCSCEEESCCCG
T ss_pred cEeCCCCeEEEEEEEcCCceEEEEECCEeceeccCCccceecCCceEECcccc
Confidence 3455 999999999975446889999998877531111222234688888764
No 7
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=75.44 E-value=15 Score=31.35 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=32.2
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeee--ccccccceEEEeCCcE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRL--AWKFRGHERIYVDGIE 228 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL--~WkFRGNetI~vDG~~ 228 (342)
.++. |+.|.|.|+-. +..+.+.|||.......-- .-.+.-+..|+|.|+|
T Consensus 91 ~~v~Dg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p 143 (191)
T 3v64_A 91 VKVNTNRWLRIRAHRE-HREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQ 143 (191)
T ss_dssp EECTTSSCEEEEEEEE-TTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCS
T ss_pred ccccCCCCEEEEEEEe-CCEEEEEECCeeeEeEECCCCcceeccCCceEEcccC
Confidence 4577 99999999987 4589999999865443210 1111223456777765
No 8
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=73.48 E-value=22 Score=33.85 Aligned_cols=79 Identities=25% Similarity=0.286 Sum_probs=51.3
Q ss_pred CCceEEEEEECceEEEEe--CCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCce
Q 019376 120 DSGFYIAISCNARLEFFL--GDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGV 196 (342)
Q Consensus 120 ~sgfYVAVv~d~EvvLlL--GDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~ 196 (342)
..+|...-+.|+.+.|.+ |+. .. .-.+..++. |++|.|.|+-. +..
T Consensus 86 ~~df~~l~L~~G~l~~~~~~g~~------------------~~------------~~~~~~~~nDg~WH~V~v~r~-~~~ 134 (422)
T 1h30_A 86 DSTWIVLALRAGRLELQLRYNGV------------------GR------------VTSSGPVINHGMWQTISVEEL-ARN 134 (422)
T ss_dssp TSEEEEEEEETTEEEEEEEETTE------------------EE------------EEEEEEECCSSCCEEEEEEEC-SSE
T ss_pred CCcEEEEEEECCEEEEEEECCCC------------------cE------------EEecCceecCCCCEEEEEEEc-CCE
Confidence 456777777899988765 430 00 112334566 99999999987 458
Q ss_pred EEEEEcCEEEEEEeee--cccc-cc--ceEEEeCCcEE
Q 019376 197 LKVKVDGETSLVIKRL--AWKF-RG--HERIYVDGIEV 229 (342)
Q Consensus 197 L~V~VDgk~vl~VKRL--~WkF-RG--NetI~vDG~~V 229 (342)
+.+.||++.+....-- .... +| +..|+|.|+|.
T Consensus 135 ~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~ 172 (422)
T 1h30_A 135 LVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPF 172 (422)
T ss_dssp EEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSS
T ss_pred EEEEECCeeeEEeecCCcccccccccccceEEEecCcc
Confidence 9999999987765211 1111 23 45688888763
No 9
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=69.54 E-value=6.5 Score=33.67 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=34.4
Q ss_pred eEEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeec--cccccceEEEeCCcE
Q 019376 177 RAHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLA--WKFRGHERIYVDGIE 228 (342)
Q Consensus 177 kA~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~--WkFRGNetI~vDG~~ 228 (342)
...+. |+.|.|.|+-. +..+.+.|||.......--. -.+.=+..|+|.|+|
T Consensus 89 ~~~l~Dg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p 142 (195)
T 3sh4_A 89 EDPINDGEWHRVTALRE-GRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAP 142 (195)
T ss_dssp EEECCSSSCEEEEEEEE-TTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCT
T ss_pred CceeCCCCeEEEEEEEe-CCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCC
Confidence 45677 99999999987 45899999998765432110 111223458888876
No 10
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=68.67 E-value=16 Score=30.93 Aligned_cols=48 Identities=17% Similarity=0.229 Sum_probs=33.0
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEee----eccccccceEEEeCCcE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKR----LAWKFRGHERIYVDGIE 228 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKR----L~WkFRGNetI~vDG~~ 228 (342)
..+. |+.|.|.|+-. +..+.+.|||+......- -..++ +..|+|.|+|
T Consensus 91 ~~l~Dg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~l~~--~~~lyvGG~p 143 (189)
T 3pve_A 91 EPIALGTWVRVFLERN-GRKGALQVGDGPRVLGESPVPHTMLNL--KEPLYVGGAP 143 (189)
T ss_dssp SCCCTTSEEEEEEEEE-TTEEEEEETTSCCEEEECCSSCCCCCC--CSCEEESCCS
T ss_pred cccCCCCEEEEEEEEe-CCEEEEEECCceeEeEEcCCCcceecC--CCCEEECCcC
Confidence 4566 99999999987 458999999986544321 11222 3458888876
No 11
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=67.45 E-value=23 Score=33.17 Aligned_cols=60 Identities=20% Similarity=0.082 Sum_probs=41.2
Q ss_pred CCceEEEEEECceEEEEe--CCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCce
Q 019376 120 DSGFYIAISCNARLEFFL--GDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGV 196 (342)
Q Consensus 120 ~sgfYVAVv~d~EvvLlL--GDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~ 196 (342)
..+|...-+.|+.+.|.+ |+- + ..+. +..++. |+.|.|.|+-. +..
T Consensus 82 ~~dfi~l~L~~G~l~~~~~~g~g-----------~------~~~~-------------~~~~~~Dg~WH~V~v~r~-~~~ 130 (394)
T 1dyk_A 82 HADFATVQLRNGFPYFSYDLGSG-----------D------TSTM-------------IPTKINDGQWHKIKIVRV-KQE 130 (394)
T ss_dssp SSSEEEEEEETTEEEEEEESSSC-----------E------EEEE-------------CCSCCCSSSCEEEEEEEE-TTE
T ss_pred CCceEEEEEECCEEEEEEECCCC-----------c------eEEE-------------cccccCCCCEEEEEEEEe-CCE
Confidence 356777777899988865 541 0 1111 112455 99999999987 358
Q ss_pred EEEEEcCEEEEEEe
Q 019376 197 LKVKVDGETSLVIK 210 (342)
Q Consensus 197 L~V~VDgk~vl~VK 210 (342)
+.+.|||+.+....
T Consensus 131 ~~L~VD~~~~~~~~ 144 (394)
T 1dyk_A 131 GILYVDDASSQTIS 144 (394)
T ss_dssp EEEEETTEEEEEEC
T ss_pred EEEEEcCcccceec
Confidence 99999999877653
No 12
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=61.65 E-value=7 Score=33.00 Aligned_cols=51 Identities=24% Similarity=0.282 Sum_probs=35.1
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccc---cccceEEEeCCcEE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWK---FRGHERIYVDGIEV 229 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~Wk---FRGNetI~vDG~~V 229 (342)
..+. |+.|.|.|+-. +..+.+.||+..........=. +--+..|+|+|+|.
T Consensus 86 ~~vnDg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~ 140 (178)
T 3bod_A 86 AIINDGKYHVVRFTRS-GGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ 140 (178)
T ss_dssp SCCCSSSCEEEEEEEE-TTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTT
T ss_pred cCccCCCeEEEEEEEe-CCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccC
Confidence 3466 99999999987 4589999999876554322111 23344688888763
No 13
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=59.86 E-value=35 Score=28.73 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=41.7
Q ss_pred CCceEEEEEECceEEEEe--CCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEc-ceeceEEEEecCCce
Q 019376 120 DSGFYIAISCNARLEFFL--GDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFL-GSKHEIGIECSDGGV 196 (342)
Q Consensus 120 ~sgfYVAVv~d~EvvLlL--GDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~-G~~HeI~Iec~~~g~ 196 (342)
..+|...-+.|+.+.|.+ |+- + .. -.+...+. |+.|.|.|+-. +..
T Consensus 52 ~~d~l~L~L~~G~l~~~~~~G~~-----------~------~~-------------~~~~~~lnDg~WH~V~v~r~-~~~ 100 (182)
T 2r16_A 52 SADTLRLELDAGRVKLTVNLGKG-----------P------ET-------------LFAGYNLNDNEWHTVRVVRR-GKS 100 (182)
T ss_dssp SCCEEEEEEETTEEEEEEESSSC-----------C------EE-------------EEECSSCCSSSCEEEEEEEE-TTE
T ss_pred CCCEEEEEEECCEEEEEEECCCC-----------c------eE-------------EEcCcccCCCCeEEEEEEEE-CCE
Confidence 457777777899998865 431 0 10 11344566 99999999988 458
Q ss_pred EEEEEcCEEEEEE
Q 019376 197 LKVKVDGETSLVI 209 (342)
Q Consensus 197 L~V~VDgk~vl~V 209 (342)
+.+.||+..+.+.
T Consensus 101 ~~L~VD~~~~~~~ 113 (182)
T 2r16_A 101 LKLTVDDQQAMTG 113 (182)
T ss_dssp EEEEETTCCEEEE
T ss_pred EEEEECCceeEeE
Confidence 9999999987654
No 14
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=56.76 E-value=23 Score=32.96 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=31.7
Q ss_pred eeeeeeEEEc-ceeceEEEEec----CCceEEEEEcCEEEEEEeee
Q 019376 172 KSYMSRAHFL-GSKHEIGIECS----DGGVLKVKVDGETSLVIKRL 212 (342)
Q Consensus 172 ~~y~TkA~F~-G~~HeI~Iec~----~~g~L~V~VDgk~vl~VKRL 212 (342)
+.|...+.+. |+.|+|+|... ..|-+.|.+||++|+.-+..
T Consensus 138 ~~~~~l~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~v~~~~g~ 183 (238)
T 2zzj_A 138 VTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEYNV 183 (238)
T ss_dssp EEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEEEEEEEEE
T ss_pred eeccccccccCCceEEEEEEEEEeCCCCcEEEEEECCEEEEeecCc
Confidence 3455566666 99999999963 34589999999999987543
No 15
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=56.42 E-value=13 Score=31.87 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=26.1
Q ss_pred ceeceEEEEecCCceEEEEEcCEEEEEEee
Q 019376 182 GSKHEIGIECSDGGVLKVKVDGETSLVIKR 211 (342)
Q Consensus 182 G~~HeI~Iec~~~g~L~V~VDgk~vl~VKR 211 (342)
|+.|.|.|++. ++.+.|.|||+.++.+.-
T Consensus 131 g~w~~l~I~~~-G~~i~~~vnG~~v~~~~D 159 (185)
T 4b1m_A 131 NKKYHLKTEAE-GDRFKIYLDDRLVIDAHD 159 (185)
T ss_dssp SCCEEEEEEEE-TTEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEEEE-CCEEEEEECCEEEEEEEC
Confidence 99999999998 559999999999998864
No 16
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=54.76 E-value=35 Score=35.60 Aligned_cols=35 Identities=9% Similarity=-0.003 Sum_probs=29.7
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeecc
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAW 214 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~W 214 (342)
.+. ++.|.+.|++. +..+.+.+||+.++.+.--..
T Consensus 594 ~~~~~~w~~L~l~~~-G~~i~~~ldG~~v~~~~D~~~ 629 (656)
T 3zr5_A 594 DVTAKRWYTLTLGIK-GYFAFGMLNGTILWKNVRVKY 629 (656)
T ss_dssp SCCTTCEEEEEEEEE-TTEEEEEETTEEEEEEEECCS
T ss_pred cCCCCceEEEEEEEE-CCEEEEEECCEEEEEEecCCC
Confidence 344 99999999999 569999999999998877655
No 17
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=53.33 E-value=15 Score=34.47 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=34.1
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeee--ccccccceEEEeCCcEE
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRL--AWKFRGHERIYVDGIEV 229 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL--~WkFRGNetI~vDG~~V 229 (342)
+++ |+.|.|.|.-. +..+.+.|||..+...... ...+.-+..|+|+|.|-
T Consensus 291 ~l~DG~WH~V~v~~~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~ 343 (394)
T 1dyk_A 291 HMCNGQWHKVTAKKI-KNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGFPG 343 (394)
T ss_dssp STTSSSCEEEEEEEE-TTEEEEEETTEEEEEECCCTTCCCBCCCBCCEESCCCT
T ss_pred cccCCceEEEEEEEe-CCEEEEEECCcccccccCCCcceecccCCCEEEcCCCc
Confidence 355 99999999887 4589999999876543221 22344455688888753
No 18
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=48.83 E-value=22 Score=32.95 Aligned_cols=48 Identities=21% Similarity=0.239 Sum_probs=30.2
Q ss_pred Ec-ceeceEEEEecCCceEEEEEcCEEEEEEee-ecc-ccccceEEEeCCcE
Q 019376 180 FL-GSKHEIGIECSDGGVLKVKVDGETSLVIKR-LAW-KFRGHERIYVDGIE 228 (342)
Q Consensus 180 F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKR-L~W-kFRGNetI~vDG~~ 228 (342)
++ |+.|.|.|+-. +..+.+.|||..+..... ... .+.-+..|+|+|.|
T Consensus 280 l~DG~WH~V~l~~~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p 330 (383)
T 2jd4_A 280 LCDGKWHTLQAHKS-KHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYP 330 (383)
T ss_dssp GGSSSCEEEEEEEE-TTEEEEEETTEEEEEC----CCCCBCCCEEEEESCCC
T ss_pred ccCCCcEEEEEEEc-CCEEEEEECCeecccccCCCCcccccCCCCEEEeccc
Confidence 55 89999999876 447888899987653211 111 23334467777765
No 19
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=47.93 E-value=11 Score=35.59 Aligned_cols=50 Identities=24% Similarity=0.290 Sum_probs=34.6
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeee--ccc-cccceEEEeCCcE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRL--AWK-FRGHERIYVDGIE 228 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL--~Wk-FRGNetI~vDG~~ 228 (342)
..+. |+.|.|.|+-. +..+.+.||+..+....-- +.+ |..+..|+|+|.|
T Consensus 306 ~~l~DG~wH~V~v~r~-~~~~~L~VD~~~~~~~~~~g~~~~~~~~~~~lylGG~p 359 (410)
T 3asi_A 306 AIINDGKYHVVRFTRS-GGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKE 359 (410)
T ss_dssp CCCCSSSCEEEEEEEE-TTEEEEEETTSCCEEECCSSCCCCCBCCEEEEEESSTT
T ss_pred cCcCCCCeEEEEEEEE-CCEEEEEECCcceecccCCCccceeeeccceEEECCcc
Confidence 4566 99999999887 4589999999876554211 122 4456678888864
No 20
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=45.96 E-value=69 Score=35.16 Aligned_cols=53 Identities=17% Similarity=0.238 Sum_probs=36.9
Q ss_pred eEEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCCcEE
Q 019376 177 RAHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGIEV 229 (342)
Q Consensus 177 kA~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~~V 229 (342)
...+. |+.|.|.|+-.......+.||++.+-+...-...+.-+..++|.|+|.
T Consensus 913 ~~~vnDg~WH~V~~~~~~~~~~~L~VD~~~~~~~~~~~~~l~~~~~lylGG~p~ 966 (1245)
T 3qcw_A 913 NKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAK 966 (1245)
T ss_dssp SSCSCSSSCEEEEEEECTTCEEEEEETTEEEEEECCCCCCCCEEEEEEESCCCG
T ss_pred cccccCCCeEEEEEEEeCCeeEEEEECCEeeeeccCCcceeccCCCeEECcccc
Confidence 34556 999999999875445779999998766543333344455688888763
No 21
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=45.62 E-value=23 Score=29.51 Aligned_cols=50 Identities=16% Similarity=0.255 Sum_probs=32.3
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeee-ccc-cccceEEEeCCcE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRL-AWK-FRGHERIYVDGIE 228 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL-~Wk-FRGNetI~vDG~~ 228 (342)
..++ |+.|.|.|+-. +..+.+.|||.......-- ... .--+..++|.|.|
T Consensus 84 ~~l~Dg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p 136 (184)
T 2h0b_A 84 GKFNDNAWHDVKVTRN-LRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP 136 (184)
T ss_dssp SCSSSSSCEEEEEEEE-TTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCT
T ss_pred cccCCCCeEEEEEEEe-CCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCC
Confidence 4567 99999999976 4589999999876543210 011 0113357777764
No 22
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A*
Probab=43.79 E-value=31 Score=28.41 Aligned_cols=49 Identities=12% Similarity=0.204 Sum_probs=36.8
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCCcEEEE
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGIEVEF 231 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~~VeV 231 (342)
-|. |+.-+|.|-|. .....|.|||+...+-+.-. ....=.+|.|+| |++
T Consensus 79 PF~~G~~F~l~i~~~-~~~f~V~Vng~~~~~F~hR~-~~~~i~~l~I~G--v~l 128 (134)
T 1a78_A 79 PFQQGAEVMVCFEYQ-TQKIIIKFSSGDQFSFPVRK-VLPSIPFLSLEG--LAF 128 (134)
T ss_dssp CCCTTSEEEEEEEEC-SSEEEEEETTSCEEEEECSS-CCSSEEEEEEES--SEE
T ss_pred cccCCCcEEEEEEEc-CCEEEEEECCEEEEEecCCC-CHhhCCEEEEEe--EEE
Confidence 566 99999999998 45899999999988775322 344456688888 554
No 23
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=43.29 E-value=16 Score=32.09 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=24.4
Q ss_pred EEEc-ceeceEEEEecCCceEEEEEcCEEEEE
Q 019376 178 AHFL-GSKHEIGIECSDGGVLKVKVDGETSLV 208 (342)
Q Consensus 178 A~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~ 208 (342)
..+. |++|.|.|+-. +..+.+.||+..+.+
T Consensus 92 ~~vnDG~WH~V~v~r~-~~~~~L~VD~~~~~~ 122 (220)
T 2r1b_A 92 AIINDGKYHVVRFTRS-GGNATLQVDSWPVIE 122 (220)
T ss_dssp CCCCSSSCEEEEEEEE-TTEEEEEETTSCCEE
T ss_pred eEecCCceEEEEEEEe-CCEEEEEECCcceee
Confidence 3466 99999999987 458999999997654
No 24
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=39.66 E-value=1.6e+02 Score=29.15 Aligned_cols=26 Identities=4% Similarity=0.008 Sum_probs=20.7
Q ss_pred eEEEc-ceeceEEEEecCCceEEEEEcC
Q 019376 177 RAHFL-GSKHEIGIECSDGGVLKVKVDG 203 (342)
Q Consensus 177 kA~F~-G~~HeI~Iec~~~g~L~V~VDg 203 (342)
..++. |++|.|.|+-. +..+.+.||+
T Consensus 279 ~~~~nDg~WH~V~v~r~-~~~~~L~VD~ 305 (608)
T 2wjs_A 279 NQNHNDGKWKAFTLSRI-QKQANISIVD 305 (608)
T ss_dssp EEECCSSSCEEEEEEEE-TTEEEEEEEE
T ss_pred CccccCCceEEEEEEEe-cceEEEEEec
Confidence 34566 99999999987 3478899987
No 25
>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1
Probab=38.30 E-value=23 Score=30.56 Aligned_cols=71 Identities=13% Similarity=0.206 Sum_probs=45.6
Q ss_pred CceEEEEEECc--eEEEEeCCccHHHHHHhcccccccccceeeeeeeeeeeeeeeeeeeEEEcc---eeceEEEEecCCc
Q 019376 121 SGFYIAISCNA--RLEFFLGDLQEEFVKRSGLIMSRQVAEHALLSRREHVFGRKSYMSRAHFLG---SKHEIGIECSDGG 195 (342)
Q Consensus 121 sgfYVAVv~d~--EvvLlLGDl~~ea~~r~~~~p~~~~~~a~LvsRrEhv~G~~~y~TkA~F~G---~~HeI~Iec~~~g 195 (342)
.|-.-|||-|. --||.||=|.+||+++|.... .+...||.=+=. =.|..=.| +.++|.++|+.+
T Consensus 21 ~GLipaIvQd~~tg~VLMlayMN~EAl~~Tl~tg-----~~~y~SRSR~~L-----W~KGetSG~~Q~v~~i~~DCD~D- 89 (138)
T 1zps_A 21 EDLIIAVAQDHETGEVLMVAYMNREALRRTLETG-----TAHYWSTSRGKL-----WLKGESSGHVQRVKDVLVDCDGD- 89 (138)
T ss_dssp CCCEEEEEEETTTCCEEEEEEECHHHHHHHHHHS-----BCEEEETTTTEE-----EETTTTTSCCEEEEEEEECTTSS-
T ss_pred CCcEEEEEEECCCCCEEEEEecCHHHHHHHHhcC-----cEEEEcCCCCcc-----ccCccCCCCcEEEEEEEecCCCC-
Confidence 57888888874 568999999999999987653 355555532110 00000012 568999999954
Q ss_pred eEEEEEc
Q 019376 196 VLKVKVD 202 (342)
Q Consensus 196 ~L~V~VD 202 (342)
.|.+.|+
T Consensus 90 ~LL~~V~ 96 (138)
T 1zps_A 90 AVVLKVE 96 (138)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6666665
No 26
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=35.92 E-value=16 Score=27.34 Aligned_cols=30 Identities=30% Similarity=0.403 Sum_probs=15.4
Q ss_pred EEEcCEEEEEEeeeccccccceEEEeCCcEEEE
Q 019376 199 VKVDGETSLVIKRLAWKFRGHERIYVDGIEVEF 231 (342)
Q Consensus 199 V~VDgk~vl~VKRL~WkFRGNetI~vDG~~VeV 231 (342)
|+|||+.+ ++..-+...++.|.|+|.++++
T Consensus 48 V~VNG~~v---~~~~~~v~~gd~I~v~~~~~~~ 77 (79)
T 1p9k_A 48 VKVDGAVE---TRKRCKIVAGQTVSFAGHSVQV 77 (79)
T ss_dssp HEETTBCC---CCSSCCCCSSEEEEETTEEEEE
T ss_pred EEECCEEe---cCCCCCCCCCCEEEECCEEEEE
Confidence 44566543 2333344455566666666554
No 27
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=41.81 E-value=7.8 Score=32.27 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=25.3
Q ss_pred ceeceEEEEecCCceEEEEEcCEEEEEEee
Q 019376 182 GSKHEIGIECSDGGVLKVKVDGETSLVIKR 211 (342)
Q Consensus 182 G~~HeI~Iec~~~g~L~V~VDgk~vl~VKR 211 (342)
|+.|+|.|++. ++.+.+.|||+.++.+.-
T Consensus 110 g~w~~l~I~~~-G~~i~~~vnG~~v~~~~D 138 (172)
T 4azz_A 110 NKKYHLKTEAE-GDRFKIYLDDRLVIDAHD 138 (172)
Confidence 99999999998 458999999999888754
No 28
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=35.06 E-value=29 Score=30.74 Aligned_cols=49 Identities=22% Similarity=0.250 Sum_probs=33.1
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeec---cccccceEEEeCCcE
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLA---WKFRGHERIYVDGIE 228 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~---WkFRGNetI~vDG~~ 228 (342)
.+. |+.|.|.|+-. +..+.+.||+..+..-.... -.+.-+..|+|+|+|
T Consensus 121 ~vnDG~WH~V~v~r~-~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p 173 (226)
T 2r1d_A 121 IINDGKYHVVRFTRS-GGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKE 173 (226)
T ss_dssp CCCSSSCEEEEEEEE-TTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTT
T ss_pred EecCCCCEEEEEEEe-CCEEEEEEcCccceEEecCCCcceeccCCCeEEEcccc
Confidence 466 99999999987 45899999998644321111 112234568888886
No 29
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=29.84 E-value=1.8e+02 Score=22.08 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=31.5
Q ss_pred EEEcCEEEEEEeeeccccccceEEEeCCcEEEEEEE-----eeecccCC
Q 019376 199 VKVDGETSLVIKRLAWKFRGHERIYVDGIEVEFFWD-----VFNWINNN 242 (342)
Q Consensus 199 V~VDgk~vl~VKRL~WkFRGNetI~vDG~~VeV~WD-----VHdWlF~~ 242 (342)
..++|..+..++.-+|.|-.++...=-|.+|.+.|. .|++.+..
T Consensus 18 ~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~~H~~~i~~ 66 (112)
T 1iby_A 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDA 66 (112)
T ss_dssp EEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGG
T ss_pred EEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCCeEEEEEcC
Confidence 345676666667788999887654445899998773 78887754
No 30
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A*
Probab=29.33 E-value=83 Score=26.18 Aligned_cols=46 Identities=22% Similarity=0.268 Sum_probs=36.0
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCC
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDG 226 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG 226 (342)
-|. |+.-+|.|-|. .....|.|||+...+-++-- .+.-=.+|.|+|
T Consensus 92 PF~~G~~F~l~i~~~-~~~f~V~vng~~~~~F~hR~-p~~~i~~l~i~G 138 (148)
T 2zhn_A 92 PFQKGMPFDLCFLVQ-SSDFKVMVNGILFVQYFHRV-PFHRVDTISVNG 138 (148)
T ss_dssp CCCTTCEEEEEEEEC-SSEEEEEETTEEEEEEECSS-CGGGCCEEEEEE
T ss_pred cccCCCeEEEEEEEc-CCEEEEEECCcEEEEccCCC-ChhhcCEEEEEC
Confidence 465 99999999998 45899999999998876543 555556777776
No 31
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=27.93 E-value=33 Score=34.14 Aligned_cols=51 Identities=20% Similarity=0.418 Sum_probs=33.0
Q ss_pred eEEEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeecccccc-ceEEEeCCcEE
Q 019376 177 RAHFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRG-HERIYVDGIEV 229 (342)
Q Consensus 177 kA~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRG-NetI~vDG~~V 229 (342)
..+++ |++|.|.|.-. +..+.+.||+.... +..+...--. ...++|+|+|.
T Consensus 464 ~~~l~DG~WH~V~v~~~-~~~~~L~VD~~~~~-~~~~~~~~~l~~~~lylGG~p~ 516 (608)
T 2wjs_A 464 PNRFHDGREHSVHVERT-RGIFTVQIDEDRRH-MQNLTEEQPIEVKKLFVGGAPP 516 (608)
T ss_dssp SSCSSSSSCEEEEEEEC-SSEEEEEESSSCCE-EEECCCCSCBCCSCEEESCCCC
T ss_pred CcccCCCCeEEEEEEEe-CCEEEEEECCcccc-cccCCcccccccCceEEeCCCc
Confidence 34566 99999999987 45899999998762 2222110000 13588888764
No 32
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A
Probab=27.52 E-value=1.2e+02 Score=28.06 Aligned_cols=56 Identities=27% Similarity=0.424 Sum_probs=37.4
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEee-eccccccceEEEeCCcEEEEEEEeeec
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKR-LAWKFRGHERIYVDGIEVEFFWDVFNW 238 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKR-L~WkFRGNetI~vDG~~VeV~WDVHdW 238 (342)
-|. |+.-+|.|.|. .....|.|||+.+..-++ ++ .+.-=.+|.|+|.. -++.|..|
T Consensus 234 PF~~g~~F~l~I~~~-~~~f~V~vng~~~~~F~hR~~-~l~~i~~l~I~GDv--~l~~V~~~ 291 (291)
T 3vkl_A 234 PFSPGMYFEMIIYCD-VREFKVAVNGVHSLEYKHRFK-ELSSIDTLEINGDI--HLLEVRSW 291 (291)
T ss_dssp CCCTTCEEEEEEEEC-SSEEEEEETTEEEEEEECSSC-CGGGCCEEEEEESE--EEEEEEEC
T ss_pred CCCCCCcEEEEEEEC-CCEEEEEECCEEEEEecCCCC-CHhHccEEEEECCE--EEEEEecC
Confidence 355 99999999998 458999999999987642 22 12223457777742 23455554
No 33
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=27.19 E-value=1.4e+02 Score=22.41 Aligned_cols=16 Identities=13% Similarity=0.048 Sum_probs=10.7
Q ss_pred CCc--EEEEEEEeeeccc
Q 019376 225 DGI--EVEFFWDVFNWIN 240 (342)
Q Consensus 225 DG~--~VeV~WDVHdWlF 240 (342)
||. .+..+||..+|+-
T Consensus 103 dGkI~~~~~~~d~~~~~~ 120 (123)
T 2k54_A 103 NGRIAKAWFKIGEPRIVS 120 (123)
T ss_dssp TTEEEEEEEEEEEEECGG
T ss_pred CCEEEEEEEEcCChhhhh
Confidence 563 4667788887763
No 34
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X*
Probab=23.30 E-value=1.2e+02 Score=25.61 Aligned_cols=47 Identities=19% Similarity=0.207 Sum_probs=35.6
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCCc
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGI 227 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~ 227 (342)
-|. |+.-+|.|.|. ..+..|.|||+...+-+.-. ...-=.+|.|+|.
T Consensus 93 PF~~G~~F~l~I~~~-~~~f~V~Vng~~~~~F~hR~-p~~~I~~l~i~GD 140 (159)
T 2d6m_A 93 PFQKGMPFELCFLVQ-RSEFKVMVNKKFFVQYQHRV-PYHLVDTIAVSGC 140 (159)
T ss_dssp CCCTTCEEEEEEEEC-SSEEEEEETTEEEEEEECSS-CGGGCCEEEEEES
T ss_pred CcCCCCcEEEEEEEe-CCEEEEEECCEEEEEecCCC-ChHHccEEEEECC
Confidence 466 99999999998 45899999999988775432 4444467888773
No 35
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A*
Probab=22.93 E-value=1.3e+02 Score=25.26 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=34.6
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCC
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDG 226 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG 226 (342)
-|. |+.-+|.|-|. .....|.|||+...+-++-. ...-=.+|.|+|
T Consensus 96 PF~~G~~F~l~I~~~-~~~f~V~vng~~~~~F~hR~-~~~~i~~l~I~G 142 (154)
T 3ap9_A 96 PFKREKSFEIVIMVL-KDKFQVAVNGKHTLLYGHRI-GPEKIDTLGIYG 142 (154)
T ss_dssp CCCTTCEEEEEEEEC-SSEEEEEETTEEEEEEECSS-CGGGCCEEEEEE
T ss_pred CcccCCeEEEEEEEc-CCEEEEEECCcEEEEECCCC-CHHHCCEEEEeC
Confidence 466 99999999998 45899999999998875432 344445677776
No 36
>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens}
Probab=21.42 E-value=3.1e+02 Score=21.90 Aligned_cols=48 Identities=29% Similarity=0.527 Sum_probs=32.0
Q ss_pred cceeceEEEEec-CCceEEEEEcCEEEEEEeeeccccc--cceEEEeCC--cEEEE
Q 019376 181 LGSKHEIGIECS-DGGVLKVKVDGETSLVIKRLAWKFR--GHERIYVDG--IEVEF 231 (342)
Q Consensus 181 ~G~~HeI~Iec~-~~g~L~V~VDgk~vl~VKRL~WkFR--GNetI~vDG--~~VeV 231 (342)
.+..|.|..|=. +.|.=.|.|||+.+++ =.|-|+ |-|+..+++ ..-.|
T Consensus 13 ~~~~HkieFeHgtttGkrvi~VDGkev~r---~~wmfklvGke~F~ig~~~~k~~I 65 (90)
T 3mx7_A 13 SDGVHKIEFEHGTTSGKRVVYVDGKEEIR---KEWMFKLVGKETFYVGAAKTKATI 65 (90)
T ss_dssp TTEEEEEEEEECTTTCCEEEEETTEEEEE---ECCCSCCCEEEEEEETTTTEEEEE
T ss_pred CCCcEEEEEEeccccceEEEEECCEEEEe---cCCeEEEEeeEeEEECCcceEEEE
Confidence 388999999954 3467789999995543 344443 677777776 44433
No 37
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=21.11 E-value=63 Score=28.10 Aligned_cols=32 Identities=9% Similarity=0.134 Sum_probs=27.2
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEe
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIK 210 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VK 210 (342)
.|- |+.|-|.+.++..|.+.+.|||+.|..+.
T Consensus 132 ~l~~g~W~cvE~~~~~~G~~~~W~DG~~v~~~t 164 (218)
T 3zyp_A 132 TLPTGAFQCFEYHLGTDGTIETWLNGSLIPGMT 164 (218)
T ss_dssp CCCCSSCEEEEEEECSSSCEEEEETTEECGGGC
T ss_pred eecCCcEEEEEEEECCCCeEEEEECCEEeeeee
Confidence 355 99999999999888999999999986543
No 38
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A*
Probab=20.56 E-value=1.5e+02 Score=24.46 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=34.8
Q ss_pred EEc-ceeceEEEEecCCceEEEEEcCEEEEEEeeeccccccceEEEeCCc
Q 019376 179 HFL-GSKHEIGIECSDGGVLKVKVDGETSLVIKRLAWKFRGHERIYVDGI 227 (342)
Q Consensus 179 ~F~-G~~HeI~Iec~~~g~L~V~VDgk~vl~VKRL~WkFRGNetI~vDG~ 227 (342)
-|. |+.-+|.|-|.. ....|.|||+.+.+-++-- ...-=.+|.|+|.
T Consensus 82 PF~~G~~F~l~I~~~~-~~f~V~Vng~~~~~F~hR~-~~~~i~~l~i~Gd 129 (142)
T 1g86_A 82 PFQDGQEFELSISVLP-DKYQVMVNGQSSYTFDHRI-KPEAVKMVQVWRD 129 (142)
T ss_dssp CCCTTCCEEEEEEECS-SEEEEEETTEEEEEEECSS-CGGGCCEEEEEES
T ss_pred CccCCCcEEEEEEeCC-CEEEEEECCcEEEEecCCC-ChhheeEEEEeCC
Confidence 466 999999999984 5899999999998875322 3444456777763
No 39
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=20.39 E-value=20 Score=28.21 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=16.4
Q ss_pred cCEEEEEEe-eec-cccccce
Q 019376 202 DGETSLVIK-RLA-WKFRGHE 220 (342)
Q Consensus 202 Dgk~vl~VK-RL~-WkFRGNe 220 (342)
||+..++++ |-| |+-||+.
T Consensus 51 ~G~~~~hl~~n~~~~n~RG~~ 71 (79)
T 2con_A 51 DGTLHMHFSRNPKVLNPRGLR 71 (79)
T ss_dssp SCCCBCCCCCCCCCCCCCCCC
T ss_pred CCcEEEeccCCccccccCCCC
Confidence 788888996 789 9999984
Done!