Your job contains 1 sequence.
>019378
MFYAGSGARYPLHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFH
LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY
DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQH
AKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVASTDKD
EASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEG
SEMKPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMISVTWE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019378
(342 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204497 - symbol:AT1G14570 "AT1G14570" species... 1116 4.1e-113 1
TAIR|locus:2202872 - symbol:AT1G59550 "AT1G59550" species... 305 3.2e-43 2
ZFIN|ZDB-GENE-040704-8 - symbol:ubxn7 "UBX domain protein... 346 4.9e-36 2
UNIPROTKB|E1BTX4 - symbol:UBXN7 "Uncharacterized protein"... 344 1.9e-35 2
UNIPROTKB|I3LQY9 - symbol:UBXN7 "Uncharacterized protein"... 335 8.1e-35 2
UNIPROTKB|E2R9U7 - symbol:UBXN7 "Uncharacterized protein"... 335 8.4e-35 2
UNIPROTKB|O94888 - symbol:UBXN7 "UBX domain-containing pr... 335 8.4e-35 2
UNIPROTKB|F1MUA8 - symbol:UBXN7 "Uncharacterized protein"... 331 2.1e-34 2
MGI|MGI:2146388 - symbol:Ubxn7 "UBX domain protein 7" spe... 326 7.1e-34 2
POMBASE|SPAC2C4.15c - symbol:ubx2 "UBX domain protein Ubx... 359 6.7e-33 1
TAIR|locus:505006365 - symbol:AT3G23605 "AT3G23605" speci... 282 9.6e-29 2
DICTYBASE|DDB_G0270358 - symbol:DDB_G0270358 "ubiquitin i... 283 7.3e-28 2
UNIPROTKB|G4NFR6 - symbol:MGG_08745 "Uncharacterized prot... 236 2.0e-23 2
CGD|CAL0001806 - symbol:orf19.4430 species:5476 "Candida ... 246 4.4e-23 2
SGD|S000002738 - symbol:UBX5 "UBX domain-containing prote... 260 9.1e-22 1
ASPGD|ASPL0000032551 - symbol:AN5675 species:162425 "Emer... 231 4.4e-20 2
DICTYBASE|DDB_G0280423 - symbol:DDB_G0280423 "UAS domain-... 93 1.5e-05 2
ZFIN|ZDB-GENE-050208-312 - symbol:faf2 "Fas associated fa... 119 0.00025 1
UNIPROTKB|Q96CS3 - symbol:FAF2 "FAS-associated factor 2" ... 114 0.00090 1
TAIR|locus:2139787 - symbol:SAY1 species:3702 "Arabidopsi... 99 0.00093 2
FB|FBgn0025608 - symbol:Faf "Fas-associated factor" speci... 114 0.00096 1
>TAIR|locus:2204497 [details] [associations]
symbol:AT1G14570 "AT1G14570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR001012 InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 SUPFAM:SSF46934 InterPro:IPR006577 SMART:SM00594
eggNOG:NOG322646 OMA:TTEFSSH InterPro:IPR017346 PIRSF:PIRSF037991
HOGENOM:HOG000015171 EMBL:AF370507 EMBL:AY064683 EMBL:AK317323
IPI:IPI00536583 RefSeq:NP_563954.1 RefSeq:NP_973827.1
UniGene:At.19055 ProteinModelPortal:Q94JZ8 SMR:Q94JZ8 STRING:Q94JZ8
PaxDb:Q94JZ8 PRIDE:Q94JZ8 EnsemblPlants:AT1G14570.1
EnsemblPlants:AT1G14570.2 GeneID:838019 KEGG:ath:AT1G14570
TAIR:At1g14570 InParanoid:Q94JZ8 PhylomeDB:Q94JZ8
ProtClustDB:CLSN2687806 Genevestigator:Q94JZ8 Uniprot:Q94JZ8
Length = 468
Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
Identities = 226/359 (62%), Positives = 265/359 (73%)
Query: 1 MFYAGSGARYPLHEPSSLIAFRNFDEEMKRPGVWESEQG--------AASTADSS---RD 49
M+Y EP+SLIAFRNF EE K PG+WE ++G +AS ++S+ RD
Sbjct: 110 MYYGAMRVGNSQPEPNSLIAFRNFSEEPKSPGIWEPDEGDSSASASASASASESASAPRD 169
Query: 50 NLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQT 109
+LASLYRPPFHLMF GSFE+AK +S QDKWLLVNLQST EFSSHMLNRDTWAN+AVSQT
Sbjct: 170 SLASLYRPPFHLMFQGSFEQAKTTSSSQDKWLLVNLQSTTEFSSHMLNRDTWANDAVSQT 229
Query: 110 ISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 169
I NFIFWQVYDDT+EG+KVCTYYKL+SIPVVLV+DP TGQ+MR W GMV PE+LLEDLV
Sbjct: 230 IKANFIFWQVYDDTTEGRKVCTYYKLESIPVVLVIDPTTGQRMRMWTGMVDPENLLEDLV 289
Query: 170 PFMDGGPREQHAKVSHKRPRGS-STTPQQKNKDK--PDIENEELLQALAASMETIKXXXX 226
PFMDGGPRE A +S KRPRGS S TP K K+ D E EEL +ALAAS+E
Sbjct: 290 PFMDGGPREHFASLSKKRPRGSFSLTPHSKPKEDVAKDEEEEELQRALAASLEDNNMKES 349
Query: 227 XXXXXXXXXXXXXXEA-SATEKPAYPILPEEPKV-DRSLLCRVGVRLPDGRRMQRNFLRT 284
EA ++ P +P LPEEPK DRSL CRVG+RLP+G+R+QRNFL+T
Sbjct: 350 SDDQSTIIPEEVAVEAVTSAVLPTFPPLPEEPKGGDRSLQCRVGIRLPNGQRLQRNFLKT 409
Query: 285 DPIQLLWSYCYSQLEGSEMK-PFRLTHAIPGATKSLDYDSKLTFEDSGLANAMISVTWE 342
D IQLLWS+CYSQLE SE K P +LT AIPG +K+L+Y+S LT E SG+AN+MIS TWE
Sbjct: 410 DTIQLLWSFCYSQLEESERKKPLKLTQAIPGESKTLEYESNLTLEQSGVANSMISATWE 468
>TAIR|locus:2202872 [details] [associations]
symbol:AT1G59550 "AT1G59550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001012 Pfam:PF00789 PROSITE:PS50033
SMART:SM00166 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC027036
IPI:IPI00517811 RefSeq:NP_176165.1 UniGene:At.52265
ProteinModelPortal:Q94HV8 SMR:Q94HV8 STRING:Q94HV8
EnsemblPlants:AT1G59550.1 GeneID:842246 KEGG:ath:AT1G59550
TAIR:At1g59550 HOGENOM:HOG000015171 InParanoid:Q94HV8 OMA:SIISVTW
PhylomeDB:Q94HV8 ProtClustDB:CLSN2679671 Genevestigator:Q94HV8
Uniprot:Q94HV8
Length = 307
Score = 305 (112.4 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 64/189 (33%), Positives = 106/189 (56%)
Query: 157 GMVQPESLLEDLVPFMDGGPREQHAKVSHK-RPRGSSTTPQQKNKDKPDIENEELLQALA 215
G ++ + L+DL ++D P E A + R + + D+ D+ N L+
Sbjct: 129 GEIKAKGFLKDLKKYIDASPHEHIASTARNMRVKAEKIC----HSDQQDMGN------LS 178
Query: 216 ASMETIKXXXXXXXXXXXXXXXXXXEASATEKPAYPILPEEPK--VDRSLLCRVGVRLPD 273
+ + +++ +P+L +EPK DRS++C + VR P+
Sbjct: 179 SDSVVVSSCGREFDDVVTLSEDEEETCLSSDLFEFPVLTKEPKGDCDRSVVCSISVRFPN 238
Query: 274 GRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSKLTFEDSGLA 333
GRR QR FL+++P+QLLWS+CYS ++ S+ K F+L AIPGA+K+LDY ++ +F+ G+A
Sbjct: 239 GRRKQRKFLKSEPVQLLWSFCYSHMDESDNKAFKLVQAIPGASKTLDYGAEASFDQYGIA 298
Query: 334 NAMISVTWE 342
N++ISVTWE
Sbjct: 299 NSIISVTWE 307
Score = 168 (64.2 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 44 ADSSRDNLASLYRPP-FHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWA 102
+DS+R L SL PP +L+FNGSFE AK A+S +D WLLV++QS EF + NRD W+
Sbjct: 60 SDSTR--LPSLSPPPPLNLLFNGSFEDAKLASSSKDLWLLVHIQSETEFPCNTFNRDLWS 117
Query: 103 NEAVSQTI 110
NE VSQ +
Sbjct: 118 NEDVSQAL 125
>ZFIN|ZDB-GENE-040704-8 [details] [associations]
symbol:ubxn7 "UBX domain protein 7" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
ZFIN:ZDB-GENE-040704-8 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF46934 InterPro:IPR006577 SMART:SM00594 eggNOG:NOG322646
InterPro:IPR017346 PIRSF:PIRSF037991 GeneTree:ENSGT00390000018687
CTD:26043 HOGENOM:HOG000143398 HOVERGEN:HBG057394 OMA:PEKSDGI
OrthoDB:EOG4JDH6W EMBL:CABZ01069258 EMBL:BC063998 EMBL:BC074046
IPI:IPI00492677 RefSeq:NP_001001951.1 UniGene:Dr.81118 SMR:Q6P3G3
Ensembl:ENSDART00000017852 GeneID:402913 KEGG:dre:402913
InParanoid:Q6P3G3 NextBio:20816726 Uniprot:Q6P3G3
Length = 505
Score = 346 (126.9 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 69/174 (39%), Positives = 102/174 (58%)
Query: 21 FRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKW 80
FR+F E R E E S D LA L+RPP LM GSFE AKD+ +++KW
Sbjct: 113 FRDFQTETIRQ---EQELRNGSAVDKKLSTLADLFRPPIELMHKGSFETAKDSGQLENKW 169
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 140
L++N+Q+ ++F+ LNRD W+N+AV I +FIFWQVY D+ EG++ +YKL+ P
Sbjct: 170 LMINIQNVQDFACQCLNRDVWSNDAVKTIIREHFIFWQVYHDSEEGQRYIQFYKLNKFPY 229
Query: 141 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFM-DGGPRE-QHAKVSHKRPRGSS 192
+ ++DP TGQKM W + S ++ + F+ + G + Q ++ KR R S
Sbjct: 230 ISILDPRTGQKMVEW-NQLDVSSFMDQVTGFLSEHGQLDGQSSQPPAKRARSES 282
Score = 59 (25.8 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 243 SATEKPAYPI--LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEG 300
S +++P+ P +P D R+ +R PDG+R Q + +L+ + Q +G
Sbjct: 406 STSQQPSEPAGTSTADPD-DNGPKARLMLRYPDGQREQ--IALSAKAKLMALVRHVQSKG 462
Query: 301 SEMKPFRLTHAIPGATKS-LDYDSKLTFEDSGL 332
+ F L P + LDYD +T +++GL
Sbjct: 463 FPNERFELVTNFPRRRLAHLDYD--ITLQEAGL 493
Score = 37 (18.1 bits), Expect = 9.9e-34, Sum P(2) = 9.9e-34
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 294 CYSQLEGSE--MKPFRLTHAIPGATKSLDYDSKLTFEDSGLANA 335
C+ + E + ++P L H G T++ S+ E +G + A
Sbjct: 377 CHRKEESKKNHLEPVGLNHGQTGQTENHRSTSQQPSEPAGTSTA 420
>UNIPROTKB|E1BTX4 [details] [associations]
symbol:UBXN7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF46934 GO:GO:0034098
InterPro:IPR006577 SMART:SM00594 InterPro:IPR017346
PIRSF:PIRSF037991 GeneTree:ENSGT00390000018687 OMA:PEKSDGI
EMBL:AADN02024264 IPI:IPI00576885 Ensembl:ENSGALT00000010312
Uniprot:E1BTX4
Length = 492
Score = 344 (126.2 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 76/203 (37%), Positives = 110/203 (54%)
Query: 21 FRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKW 80
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+KW
Sbjct: 114 FRDFQTETIRQ---EQELRNGGAVDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKW 170
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 140
L++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 171 LMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLADFPY 230
Query: 141 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNK 200
V ++DP TGQK+ W + S L+ + F+ +H ++ G ST P QK
Sbjct: 231 VSILDPRTGQKLVEW-HQLDVTSFLDQVTGFLS-----EHGQLD-----GHSTNPPQKCS 279
Query: 201 DKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 280 RSESLIDASEDSQLEAAIRASLQ 302
Score = 55 (24.4 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 269 VRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKS-LDYDSKLTF 327
+R PDG+R Q + + +LL + Q +G + F L P S LDY+ +T
Sbjct: 420 LRYPDGKREQISL--PEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYE--ITL 475
Query: 328 EDSGL 332
+++GL
Sbjct: 476 QEAGL 480
>UNIPROTKB|I3LQY9 [details] [associations]
symbol:UBXN7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF46934 GO:GO:0034098
InterPro:IPR006577 SMART:SM00594 InterPro:IPR017346
PIRSF:PIRSF037991 GeneTree:ENSGT00390000018687 OMA:PEKSDGI
Ensembl:ENSSSCT00000030409 Uniprot:I3LQY9
Length = 476
Score = 335 (123.0 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 74/203 (36%), Positives = 111/203 (54%)
Query: 21 FRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKW 80
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+KW
Sbjct: 98 FRDFQTETIRQ---EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKW 154
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 140
L++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 155 LMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPY 214
Query: 141 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNK 200
V ++DP TGQK+ W + S L+ + F+ +H ++ G S++P +K
Sbjct: 215 VSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLG-----EHGQLD-----GLSSSPPKKCA 263
Query: 201 DKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 264 RSESLIDASEDSQLEAAIRASLQ 286
Score = 58 (25.5 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 269 VRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKS-LDYDSKLTF 327
+R PDG+R Q + +LL + Q +G + F L P S LDYD +T
Sbjct: 404 LRYPDGKREQITL--PEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYD--ITL 459
Query: 328 EDSGL 332
+++GL
Sbjct: 460 QEAGL 464
>UNIPROTKB|E2R9U7 [details] [associations]
symbol:UBXN7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
InterPro:IPR001012 InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033
SMART:SM00166 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF46934
GO:GO:0034098 InterPro:IPR006577 SMART:SM00594 InterPro:IPR017346
PIRSF:PIRSF037991 GeneTree:ENSGT00390000018687 CTD:26043
OMA:PEKSDGI EMBL:AAEX03017094 EMBL:AAEX03017095 RefSeq:XP_545151.2
Ensembl:ENSCAFT00000020639 GeneID:488028 KEGG:cfa:488028
NextBio:20861475 Uniprot:E2R9U7
Length = 489
Score = 335 (123.0 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 74/203 (36%), Positives = 111/203 (54%)
Query: 21 FRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKW 80
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+KW
Sbjct: 111 FRDFQTETIRQ---EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKW 167
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 140
L++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 168 LMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPY 227
Query: 141 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNK 200
V ++DP TGQK+ W + S L+ + F+ +H ++ G S++P +K
Sbjct: 228 VSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLG-----EHGQLD-----GLSSSPPKKCA 276
Query: 201 DKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 277 RSESLIDASEDSQLEAAIRASLQ 299
Score = 58 (25.5 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 269 VRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKS-LDYDSKLTF 327
+R PDG+R Q + +LL + Q +G + F L P S LDYD +T
Sbjct: 417 LRYPDGKREQITL--PEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYD--ITL 472
Query: 328 EDSGL 332
+++GL
Sbjct: 473 QEAGL 477
>UNIPROTKB|O94888 [details] [associations]
symbol:UBXN7 "UBX domain-containing protein 7" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IDA] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
Gene3D:3.40.30.10 InterPro:IPR012336 GO:GO:0043130 GO:GO:0031625
SUPFAM:SSF46934 EMBL:CH471191 GO:GO:0034098 InterPro:IPR006577
SMART:SM00594 eggNOG:NOG322646 InterPro:IPR017346 PIRSF:PIRSF037991
EMBL:AB018337 EMBL:AK129880 EMBL:BC028986 IPI:IPI00742124
RefSeq:NP_056377.1 UniGene:Hs.518524 PDB:1WJ4 PDB:2DAL PDB:2DLX
PDBsum:1WJ4 PDBsum:2DAL PDBsum:2DLX ProteinModelPortal:O94888
SMR:O94888 DIP:DIP-47029N IntAct:O94888 STRING:O94888
PhosphoSite:O94888 PaxDb:O94888 PRIDE:O94888 DNASU:26043
Ensembl:ENST00000296328 GeneID:26043 KEGG:hsa:26043 UCSC:uc003fwm.4
CTD:26043 GeneCards:GC03M196074 HGNC:HGNC:29119 neXtProt:NX_O94888
PharmGKB:PA162408447 HOGENOM:HOG000143398 HOVERGEN:HBG057394
InParanoid:O94888 OMA:PEKSDGI OrthoDB:EOG4JDH6W ChiTaRS:UBXN7
EvolutionaryTrace:O94888 GenomeRNAi:26043 NextBio:47875
PMAP-CutDB:O94888 ArrayExpress:O94888 Bgee:O94888 CleanEx:HS_UBXN7
Genevestigator:O94888 GermOnline:ENSG00000163960 Uniprot:O94888
Length = 489
Score = 335 (123.0 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 74/203 (36%), Positives = 111/203 (54%)
Query: 21 FRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKW 80
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+KW
Sbjct: 111 FRDFQTETIRQ---EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKW 167
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 140
L++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 168 LMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPY 227
Query: 141 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNK 200
V ++DP TGQK+ W + S L+ + F+ +H ++ G S++P +K
Sbjct: 228 VSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLG-----EHGQLD-----GLSSSPPKKCA 276
Query: 201 DKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 277 RSESLIDASEDSQLEAAIRASLQ 299
Score = 58 (25.5 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 269 VRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKS-LDYDSKLTF 327
+R PDG+R Q + +LL + Q +G + F L P S LDYD +T
Sbjct: 417 LRYPDGKREQITL--PEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYD--ITL 472
Query: 328 EDSGL 332
+++GL
Sbjct: 473 QEAGL 477
>UNIPROTKB|F1MUA8 [details] [associations]
symbol:UBXN7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF46934 GO:GO:0034098
InterPro:IPR006577 SMART:SM00594 InterPro:IPR017346
PIRSF:PIRSF037991 GeneTree:ENSGT00390000018687 OMA:PEKSDGI
EMBL:DAAA02001686 IPI:IPI00999362 Ensembl:ENSBTAT00000009970
Uniprot:F1MUA8
Length = 474
Score = 331 (121.6 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 73/203 (35%), Positives = 111/203 (54%)
Query: 21 FRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKW 80
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+KW
Sbjct: 96 FRDFQTETIRQ---EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKW 152
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 140
L++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 153 LMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPY 212
Query: 141 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNK 200
V ++DP TG+K+ W + S L+ + F+ +H ++ G S++P +K
Sbjct: 213 VSILDPRTGKKLVEW-HQLDVSSFLDQVTGFLG-----EHGQLD-----GLSSSPPKKCA 261
Query: 201 DKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 262 RSESLIDASEDSQLEAAIRASLQ 284
Score = 58 (25.5 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 269 VRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKS-LDYDSKLTF 327
+R PDG+R Q + +LL + Q +G + F L P S LDYD +T
Sbjct: 402 LRYPDGKREQITL--PEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYD--ITL 457
Query: 328 EDSGL 332
+++GL
Sbjct: 458 QEAGL 462
>MGI|MGI:2146388 [details] [associations]
symbol:Ubxn7 "UBX domain protein 7" species:10090 "Mus
musculus" [GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=ISO] [GO:0043130
"ubiquitin binding" evidence=ISO] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
MGI:MGI:2146388 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF46934 InterPro:IPR006577 SMART:SM00594 eggNOG:NOG322646
InterPro:IPR017346 PIRSF:PIRSF037991 HOGENOM:HOG000143398
HOVERGEN:HBG057394 OrthoDB:EOG4JDH6W EMBL:BC062904 EMBL:AK129218
IPI:IPI00467362 UniGene:Mm.31275 ProteinModelPortal:Q6P5G6
SMR:Q6P5G6 PaxDb:Q6P5G6 PRIDE:Q6P5G6 UCSC:uc007yyq.2
Genevestigator:Q6P5G6 GermOnline:ENSMUSG00000053774 Uniprot:Q6P5G6
Length = 467
Score = 326 (119.8 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 69/189 (36%), Positives = 105/189 (55%)
Query: 35 ESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSH 94
E E D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+ ++F+
Sbjct: 100 EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQ 159
Query: 95 MLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRS 154
LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP TGQK+
Sbjct: 160 CLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 219
Query: 155 WCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDI----ENEEL 210
W + S L+ + F+ +H ++ G S++P +K + E+ +L
Sbjct: 220 W-HQLDVSSFLDQVTGFLG-----EHGQLD-----GLSSSPPKKCARSESLIDASEDSQL 268
Query: 211 LQALAASME 219
A+ AS++
Sbjct: 269 EAAIRASLQ 277
Score = 58 (25.5 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 269 VRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKS-LDYDSKLTF 327
+R PDG+R Q + +LL + Q +G + F L P S LDYD +T
Sbjct: 395 LRYPDGKREQITL--PEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYD--ITL 450
Query: 328 EDSGL 332
+++GL
Sbjct: 451 QEAGL 455
>POMBASE|SPAC2C4.15c [details] [associations]
symbol:ubx2 "UBX domain protein Ubx2" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0033554 "cellular response to
stress" evidence=IEP] [GO:0043130 "ubiquitin binding" evidence=IPI]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IGI] InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00789 PROSITE:PS50033 SMART:SM00166 PomBase:SPAC2C4.15c
GO:GO:0005634 GO:GO:0005737 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0033554 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 SUPFAM:SSF46934
InterPro:IPR006577 SMART:SM00594 PIR:T38526 RefSeq:NP_594518.1
ProteinModelPortal:O14048 IntAct:O14048 STRING:O14048
EnsemblFungi:SPAC2C4.15c.1 GeneID:2541532 KEGG:spo:SPAC2C4.15c
eggNOG:NOG322646 HOGENOM:HOG000180231 OMA:TTEFSSH OrthoDB:EOG45F0ZH
NextBio:20802629 InterPro:IPR017346 PIRSF:PIRSF037991
Uniprot:O14048
Length = 427
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 88/310 (28%), Positives = 156/310 (50%)
Query: 36 SEQGAASTADSSR-DNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSH 94
+E + + SSR LA L+RPP+ ++ N S ++A+ AS Q +W+LVNLQ++ F
Sbjct: 129 TEDSSEESDSSSRASRLAKLFRPPYDIISNLSLDEARIEASSQKRWILVNLQTSTSFECQ 188
Query: 95 MLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRS 154
+LNRD W +E+V + I +F+F Q+ DD G + +Y + S P + ++DP TG++++
Sbjct: 189 VLNRDLWKDESVKEVIRAHFLFLQLLDDEEPGMEFKRFYPVRSTPHIAILDPRTGERVKE 248
Query: 155 WCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQAL 214
W P + L F++G ++ + K P G+ + QK + E+E++ +A+
Sbjct: 249 WSKSFTPADFVIALNDFLEGCTLDETS--GRKNPLGAKS---QKPVEAMS-EDEQMHKAI 302
Query: 215 AASMETIKXXXXXXXXXXXXXXXXXXEASAT--EKPAYPILPEEPKVDRSLLCRVGVRLP 272
AAS+ A T + + EEP ++ R+ +R+P
Sbjct: 303 AASLGNGNSTTESQGESSSQQAESHGVADDTVHKIDSAECDAEEPSPGPNVT-RIQIRMP 361
Query: 273 DGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSKLTFEDSGL 332
+G R R F TDP+ +++Y EG++ +PF LT SLD T +++G+
Sbjct: 362 NGARFIRRFSLTDPVSKVYAYVKGVAEGADKQPFSLTFQRKSLWTSLDS----TIKEAGI 417
Query: 333 ANAMISVTWE 342
N + ++
Sbjct: 418 QNTALQFEFQ 427
>TAIR|locus:505006365 [details] [associations]
symbol:AT3G23605 "AT3G23605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001012 Pfam:PF00789
PROSITE:PS50033 EMBL:CP002686 EMBL:AB023036 EMBL:BT025611
EMBL:AK221143 IPI:IPI00516367 RefSeq:NP_566733.1 UniGene:At.37677
ProteinModelPortal:Q9LUG7 SMR:Q9LUG7 STRING:Q9LUG7
EnsemblPlants:AT3G23605.1 GeneID:821940 KEGG:ath:AT3G23605
TAIR:At3g23605 HOGENOM:HOG000153123 OMA:ESVQLLW PhylomeDB:Q9LUG7
ProtClustDB:CLSN2917240 Genevestigator:Q9LUG7 Uniprot:Q9LUG7
Length = 152
Score = 282 (104.3 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 55/97 (56%), Positives = 74/97 (76%)
Query: 250 YPILPEEPK--VDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQL--EGSEMKP 305
+P LPEEP +D+S+LCR+ VRLPDGRR+QR+FL+++ +QLLWS+CYSQ+ E SE K
Sbjct: 55 FPNLPEEPNRDMDQSVLCRICVRLPDGRRIQRSFLKSESVQLLWSFCYSQIGDESSERKR 114
Query: 306 -FRLTHAIPGATKSLDYDSKLTFEDSGLANAMISVTW 341
F+L PG K+L + S TFE SGLAN+++SVTW
Sbjct: 115 RFKLIQGFPGDYKNLYFGSNTTFEQSGLANSLVSVTW 151
Score = 53 (23.7 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 158 MVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIEN 207
M++ +S++E L PF+D E + KRP+ S ++ ++ + N
Sbjct: 1 MLECQSMMEKLSPFVDVASLEIESLRRIKRPKRFSEEESEETENTTNSSN 50
>DICTYBASE|DDB_G0270358 [details] [associations]
symbol:DDB_G0270358 "ubiquitin interacting motif
(UIM) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
dictyBase:DDB_G0270358 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 SUPFAM:SSF46934
InterPro:IPR006577 SMART:SM00594 eggNOG:NOG322646
InterPro:IPR017346 PIRSF:PIRSF037991 RefSeq:XP_646734.1
ProteinModelPortal:Q55BU7 EnsemblProtists:DDB0304448 GeneID:8617706
KEGG:ddi:DDB_G0270358 OMA:MLSANDE ProtClustDB:CLSZ2846934
Uniprot:Q55BU7
Length = 503
Score = 283 (104.7 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 60/187 (32%), Positives = 102/187 (54%)
Query: 34 WESEQGA-ASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFS 92
+E E+G A + +L+ L++PP ++ G+F++ K A + ++LVN+Q +EF
Sbjct: 116 FEKERGINQDKATEKQKSLSELFKPPLDILTFGTFDEIKKMAEQKKYFVLVNIQDVQEFD 175
Query: 93 SHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM 152
LNRDTW+N+ + + I NF+FWQV EGK Y + P + ++DP TGQK+
Sbjct: 176 CQKLNRDTWSNKDLKELIGENFVFWQVNSANPEGKWFTQIYPVFKFPYIAIIDPRTGQKL 235
Query: 153 RSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQ 212
+ G + E + + LV F+ ++ P SS++ K + K + E+EEL
Sbjct: 236 QDMTGFIDAEEMAQYLVTFLS--TNSFSGQIDP--PPSSSSSGASKKQKKYNTEDEELEL 291
Query: 213 ALAASME 219
A+A S++
Sbjct: 292 AIALSLK 298
Score = 54 (24.1 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 265 CRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSK 324
C + VR P G ++ F D I+ + Y Y Q++ + + F+L + P S + SK
Sbjct: 429 CIIQVRCPGGETLKGQFHSHDQIKNI--YYYVQVK-TGISNFKLFTSFPKLDLSGELMSK 485
Query: 325 LTFEDSGLA-NAMISVTWE 342
T ++ LA A++++ E
Sbjct: 486 -TLKELDLAPRAVLNMLQE 503
>UNIPROTKB|G4NFR6 [details] [associations]
symbol:MGG_08745 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001012 Pfam:PF00789 SMART:SM00166
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:CM001236 GO:GO:0043130 InterPro:IPR006577
SMART:SM00594 RefSeq:XP_003719240.1 ProteinModelPortal:G4NFR6
EnsemblFungi:MGG_08745T0 GeneID:2679054 KEGG:mgr:MGG_08745
Uniprot:G4NFR6
Length = 571
Score = 236 (88.1 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 59/190 (31%), Positives = 92/190 (48%)
Query: 39 GAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNR 98
G A ++ LA LYRPP ++ + ++ +D Q KW+LVNLQ +F MLNR
Sbjct: 234 GPAGAQSATSRRLAELYRPPREILTHLDWDDTRDEGKDQKKWILVNLQDMADFRCQMLNR 293
Query: 99 DTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY-------KLDSIPVVLVVDPITGQK 151
D W +E V + I F+F Q D ++ Y D P + VVDP TG++
Sbjct: 294 DVWKDEGVQEIIREKFLFLQYDKDIGNARQFIQLYLPNEQHLNSDIYPYIAVVDPRTGEQ 353
Query: 152 MRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELL 211
M+ W G P + + D E++ + S K P ++ P++ KD + +E+L
Sbjct: 354 MKVWSGQDCPTTATDFKEKLQDF--LERY-RFSGKNPVATTKAPKRVVKDVDRMTEDEML 410
Query: 212 Q-ALAASMET 220
Q A+ S+ T
Sbjct: 411 QLAMQNSLAT 420
Score = 76 (31.8 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 241 EASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEG 300
E SA K A EP + + R+ P G+ ++R F TDP++ L+ + ++ G
Sbjct: 469 EDSAWAKIASDRPHSEPAAGSTGVTRIQFMSPSGKVVRR-FAVTDPVRRLYEWLKAEPLG 527
Query: 301 SEMKP---FRLTHAIPGATKSLDYDSKLTFEDSGLANAMISV 339
E K F + G +D D T E++G+ + ++V
Sbjct: 528 GEDKAGVEFEIKRVPQGTDLIVDLDK--TIEEAGIKQSSLAV 567
>CGD|CAL0001806 [details] [associations]
symbol:orf19.4430 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR001012 InterPro:IPR009060 Pfam:PF00789
PROSITE:PS50033 SMART:SM00166 CGD:CAL0001806 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF46934 EMBL:AACQ01000115
EMBL:AACQ01000111 InterPro:IPR006577 SMART:SM00594 eggNOG:NOG322646
RefSeq:XP_713875.1 RefSeq:XP_714075.1 ProteinModelPortal:Q59WE0
STRING:Q59WE0 GeneID:3644262 GeneID:3644466 KEGG:cal:CaO19.11908
KEGG:cal:CaO19.4430 Uniprot:Q59WE0
Length = 546
Score = 246 (91.7 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 45/130 (34%), Positives = 76/130 (58%)
Query: 46 SSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEA 105
S++ LA+L+RPPF ++ + ++AK KW+L+N+Q + EF +LNRD W+NE
Sbjct: 222 STQRRLANLFRPPFDIISVLNLDEAKYQGRQLKKWILINIQDSSEFQCQVLNRDFWSNER 281
Query: 106 VSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWC-GMVQ-PES 163
+ Q + NFIF Q D+ G+ +Y +D+ P + ++DP+TG+++ W G V
Sbjct: 282 IKQIVKQNFIFLQYQTDSVNGQSYVNFYHVDTFPHIAILDPLTGERVHKWTDGQVPLVNE 341
Query: 164 LLEDLVPFMD 173
+E F+D
Sbjct: 342 WIEQTYKFLD 351
Score = 50 (22.7 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 26/110 (23%), Positives = 49/110 (44%)
Query: 246 EKPAYPILPEEP-----KVDRSL-----LCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCY 295
+ P P +P++P +D S R+ +R P+G+R+ R ++ ++ +
Sbjct: 433 DTPQEPEIPKDPFEAITPIDHSEPTEQPFTRIQIRFPNGKRLVRKLNPDAKVKSIFEWLK 492
Query: 296 SQLEGSEMK-----P---FRLTHAIPGATKSLDYDSKLTFEDSGLANAMI 337
L+ + P F L+++ A K +D K T E++ L NA I
Sbjct: 493 YVLQNDFQEYGLNSPDDRFILSNSSNKAFKFIDSLDK-TIEEANLKNASI 541
>SGD|S000002738 [details] [associations]
symbol:UBX5 "UBX domain-containing protein that interacts
with Cdc48p" species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00789 PROSITE:PS50033 SMART:SM00166 SGD:S000002738
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 EMBL:BK006938
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF46934 EMBL:U32517
eggNOG:NOG322646 HOGENOM:HOG000180231 OrthoDB:EOG45F0ZH PIR:S59795
RefSeq:NP_010617.1 ProteinModelPortal:Q06682 SMR:Q06682
DIP:DIP-3938N IntAct:Q06682 MINT:MINT-540958 STRING:Q06682
PaxDb:Q06682 PeptideAtlas:Q06682 EnsemblFungi:YDR330W GeneID:851930
KEGG:sce:YDR330W CYGD:YDR330w GeneTree:ENSGT00390000018687
OMA:RTIYEVI NextBio:969989 Genevestigator:Q06682 GermOnline:YDR330W
Uniprot:Q06682
Length = 500
Score = 260 (96.6 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 72/301 (23%), Positives = 133/301 (44%)
Query: 46 SSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEA 105
S LA L+RPPF +M + AK A + KW+++N+Q + F LNRD W++
Sbjct: 203 SKEQKLALLFRPPFSIMSKLDLDAAKQKARAKQKWIMINIQDSGIFQCQALNRDLWSSRP 262
Query: 106 VSQTISTNFIFWQVYDDTSEGKKVCTYYKL---DSIPVVLVVDPITGQKMRSWCGMVQ-P 161
V I NF+F Q ++ + +Y L D +P + ++DPITG++++ W +V P
Sbjct: 263 VKTIIKENFVFLQYQYESRNAQPYLQFYHLNNKDDLPHIAILDPITGERVKQWNRVVPIP 322
Query: 162 ESLLEDLVPFMDG---GPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASM 218
E + ++ F+ P+ + V+ P+ TT ++ + + I+ + ++
Sbjct: 323 EQFISEINEFLASFSLDPKVPNPTVNEPLPKVDPTTLTEEQQMELAIKESLNNNSSKSNQ 382
Query: 219 ETIKXXXXXXXXXXXXXXXXXXEASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQ 278
E + EA +P P +P + R+ +R DG R+
Sbjct: 383 EEVPSTGEEQKRVQEPDPFSTIEARVHPEP-----PNKP----GITTRIQIRTGDGSRLV 433
Query: 279 RNF-LRTDPIQLLWSYCYSQLEGSEMKPFRLT-HAIPGATKSLDYDSKLTFEDSGLANAM 336
R F D ++ ++ ++++G F L H L+ +T D+GL N+
Sbjct: 434 RRFNALEDTVRTIYEVIKTEMDGFADSRFTLNDHQREDLIDKLN----MTIADAGLKNSS 489
Query: 337 I 337
+
Sbjct: 490 L 490
>ASPGD|ASPL0000032551 [details] [associations]
symbol:AN5675 species:162425 "Emericella nidulans"
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00789 SMART:SM00166 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 EMBL:AACD01000098 EMBL:BN001305 SUPFAM:SSF46934
eggNOG:NOG322646 HOGENOM:HOG000180231 OrthoDB:EOG45F0ZH
RefSeq:XP_663279.1 ProteinModelPortal:Q5B1A5
EnsemblFungi:CADANIAT00003390 GeneID:2871960 KEGG:ani:AN5675.2
OMA:QLHEFLD Uniprot:Q5B1A5
Length = 521
Score = 231 (86.4 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 55/156 (35%), Positives = 79/156 (50%)
Query: 25 DEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVN 84
+EE R + + G AS S + LA LYRPPF +M ++ A++ +KWLLVN
Sbjct: 177 EEESHRERL-AAATGGASERSSKTNLLAELYRPPFEIMSRLPWDLAREDGREHEKWLLVN 235
Query: 85 LQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY-----KLDSIP 139
+Q F +LNRD W + V +TI +FIF Q D YY D+ P
Sbjct: 236 IQDPSIFDCQVLNRDLWKDANVKETIQEHFIFLQYTKDDPRAAPYLQYYFQASDVSDNYP 295
Query: 140 VVLVVDPITGQKMRSWCG--MVQPESLLEDLVPFMD 173
+ +VDP TG++M+ W G +V+ L L F+D
Sbjct: 296 HIAIVDPRTGEQMKIWSGPPVVKAADFLMQLHEFLD 331
Score = 55 (24.4 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 256 EPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQ--LEGSEMKPFRLTHAIP 313
EP D R+ R P GR ++R F DP++ ++ + ++ L+ F L
Sbjct: 436 EPPTDPVTTTRIQFRHPTGRVIRR-FALNDPVRRIYEWLKAEPVLKEKAGVEFELNAMGR 494
Query: 314 GATKSLDYDSKLTFEDSGLANAMISV 339
+LD + E +GL N I +
Sbjct: 495 NLIDALDQ----SVEAAGLKNGTIMI 516
>DICTYBASE|DDB_G0280423 [details] [associations]
symbol:DDB_G0280423 "UAS domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001012
Pfam:PF00789 PROSITE:PS50033 SMART:SM00166 dictyBase:DDB_G0280423
EMBL:AAFI02000036 InterPro:IPR006577 SMART:SM00594 eggNOG:NOG302977
RefSeq:XP_641167.1 ProteinModelPortal:Q54VE2 PRIDE:Q54VE2
EnsemblProtists:DDB0304553 GeneID:8622547 KEGG:ddi:DDB_G0280423
InParanoid:Q54VE2 OMA:HENTEAY ProtClustDB:CLSZ2731586
Uniprot:Q54VE2
Length = 362
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/115 (20%), Positives = 54/115 (46%)
Query: 33 VWESEQGAASTADSSRDNLASLYRP--PFHLMFN-GSFEKAKDAASVQDKWLLVNLQSTK 89
+W + +++ +R + L H F S+ +A A + K+L+V + S++
Sbjct: 36 LWNKQFTEPDSSEETRKTVLRLTERFGETHPAFRMASYNEAVSFAKSKFKFLIVYIHSSQ 95
Query: 90 EFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 144
SS+ ++ + + + I N+IFW TS G ++C ++ + P + ++
Sbjct: 96 HPSSNSFCKEVLFTKEIKEFIEANYIFWVCDVSTSIGLRMCNLLEVTTFPALSLI 150
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 254 PEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 313
P++ + + + ++ +RL DG ++QRNFL TD I+ + + + ++ ++ + L+ P
Sbjct: 277 PKQKQQNGVDVTKLVIRLHDGSKLQRNFLITDTIEFVMDFIDTHIQ-EPIENYVLSTHYP 335
Query: 314 GATKSLDYDSKLTFEDSGL 332
K L + K T +D GL
Sbjct: 336 --KKQLS-NLKSTLKDEGL 351
>ZFIN|ZDB-GENE-050208-312 [details] [associations]
symbol:faf2 "Fas associated factor family member 2"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033
ZFIN:ZDB-GENE-050208-312 SUPFAM:SSF46934 InterPro:IPR006577
SMART:SM00594 GeneTree:ENSGT00530000063422 EMBL:CU302253
EMBL:FP074873 IPI:IPI00495122 Ensembl:ENSDART00000029797
ArrayExpress:F1Q6Z1 Bgee:F1Q6Z1 Uniprot:F1Q6Z1
Length = 445
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 47/248 (18%), Positives = 97/248 (39%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L + R T +E I+T +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRYLLVYLHGEDHQDTDEFCRSTLCSEEALTFINTRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
EG +V + ++ P + ++ + +KM G++QPE L+ L M+
Sbjct: 213 TSKPEGYRVSQALRENTYPFLAMI-MLKDRKMTVVGRLEGLIQPEDLINQLTFIMEANQT 271
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIE---NEELLQALAASMETIKXXXXXXXXXXXX 234
++ + R + +Q+ + + ++E + E +
Sbjct: 272 YLMSERLEREERNQTQVLRQQQDEAYEASLRADQEKDRKKREEQEQKRQEEEKVRQTVLA 331
Query: 235 XXXXXXEASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYC 294
++ LP EP VD ++ RLP+ R++R FL + ++ +
Sbjct: 332 EERRRRTLEEEKERRSECLPAEPPVDDPDGVKIVFRLPNDTRVERRFLFGQSLTVIHDFL 391
Query: 295 YSQLEGSE 302
+S E E
Sbjct: 392 FSLKETPE 399
>UNIPROTKB|Q96CS3 [details] [associations]
symbol:FAF2 "FAS-associated factor 2" species:9606 "Homo
sapiens" [GO:0006986 "response to unfolded protein" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex"
evidence=IDA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IDA] InterPro:IPR001012 InterPro:IPR009060 Pfam:PF00789
PROSITE:PS50033 GO:GO:0005811 PROSITE:PS50030 GO:GO:0043130
GO:GO:0031625 SUPFAM:SSF46934 GO:GO:0006986 GO:GO:0034098
InterPro:IPR006577 SMART:SM00594 CTD:23197 eggNOG:NOG302977
HOGENOM:HOG000007539 HOVERGEN:HBG101311 OMA:RVLPCVP EMBL:AB088120
EMBL:BC001069 EMBL:BC006145 EMBL:BC014001 EMBL:AB020694
IPI:IPI00172656 RefSeq:NP_055428.1 UniGene:Hs.484242 PDB:2DAM
PDBsum:2DAM ProteinModelPortal:Q96CS3 SMR:Q96CS3 DIP:DIP-46261N
IntAct:Q96CS3 STRING:Q96CS3 PhosphoSite:Q96CS3 DMDM:74731375
PaxDb:Q96CS3 PeptideAtlas:Q96CS3 PRIDE:Q96CS3 DNASU:23197
Ensembl:ENST00000261942 GeneID:23197 KEGG:hsa:23197 UCSC:uc003mej.4
GeneCards:GC05P175875 HGNC:HGNC:24666 neXtProt:NX_Q96CS3
PharmGKB:PA162385570 InParanoid:Q96CS3 EvolutionaryTrace:Q96CS3
GenomeRNAi:23197 NextBio:44703 ArrayExpress:Q96CS3 Bgee:Q96CS3
CleanEx:HS_FAF2 Genevestigator:Q96CS3 GermOnline:ENSG00000113194
Uniprot:Q96CS3
Length = 445
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 60/296 (20%), Positives = 118/296 (39%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L S R+T V I+T +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN-- 269
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKXXXXXXXXXXXXXXX 237
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERKRRKEEE 324
Query: 238 XXXEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPI 287
+ A E+ + LP EP D ++ +LP+ R++R F + +
Sbjct: 325 VQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSL 384
Query: 288 QLLWSYCYSQLEGSEMK------PFRLTHAIPGATKSLDYDSKLTFEDSGLANAMI 337
++ + +S E E P R+ IP S ++ + T +++GL++ +
Sbjct: 385 TVIHDFLFSLKESPEKFQIEANFPRRVLPCIP----SEEWPNPPTLQEAGLSHTEV 436
>TAIR|locus:2139787 [details] [associations]
symbol:SAY1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
GO:GO:0005829 GO:GO:0005634 EMBL:CP002687 GO:GO:0016192
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 SUPFAM:SSF46934
IPI:IPI00523976 RefSeq:NP_567380.2 UniGene:At.22392
ProteinModelPortal:F4JPR7 SMR:F4JPR7 PRIDE:F4JPR7
EnsemblPlants:AT4G11740.1 GeneID:826779 KEGG:ath:AT4G11740
OMA:NFIDIAR Uniprot:F4JPR7
Length = 564
Score = 99 (39.9 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 253 LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKP--FRLTH 310
LP+EP+ D + +R+PDG R R FL++D +Q L+++ +KP +RL
Sbjct: 475 LPKEPQADEENAITLLIRMPDGTRRGRRFLKSDKLQTLFNFIDI---ARVVKPNTYRLVR 531
Query: 311 AIPGATKSLDYDSKLTFEDSGLAN 334
P D +S+ T D GL +
Sbjct: 532 PYPRHAFG-DGESESTLNDLGLTS 554
Score = 59 (25.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 28/104 (26%), Positives = 41/104 (39%)
Query: 161 PESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQA-LAASME 219
PE+ L PF+ PR Q RP S T Q+ +++ D E LQA M+
Sbjct: 372 PETGYNHL-PFLPPQPRAQ------PRPPSPSLTAQRLIREQQDDEYVASLQADRDKEMK 424
Query: 220 TIKXXXXXXXXXXXXXXXXXXEASATEKPAYPILPEEPKVDRSL 263
+I+ E E+ A L EE +++R L
Sbjct: 425 SIRDAEARQLEEETARKAFLEEEKKKEEEAQRKLEEEQELERQL 468
>FB|FBgn0025608 [details] [associations]
symbol:Faf "Fas-associated factor" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001012 Pfam:PF00789
PROSITE:PS50033 SMART:SM00166 InterPro:IPR006577 SMART:SM00594
eggNOG:NOG302977 ChiTaRS:faf EMBL:AB013610
ProteinModelPortal:O77047 SMR:O77047 STRING:O77047 PaxDb:O77047
PRIDE:O77047 FlyBase:FBgn0025608 InParanoid:O77047
OrthoDB:EOG44J10F ArrayExpress:O77047 Bgee:O77047 Uniprot:O77047
Length = 464
Score = 114 (45.2 bits), Expect = 0.00096, P = 0.00096
Identities = 53/266 (19%), Positives = 106/266 (39%)
Query: 56 RPPFHLMF-NGSFEKAKDAASVQDKWLLVNLQS--TKEFSSHMLNRDTWANEAVSQTIST 112
R P H +F G++ +A + A + ++L+V L K R+T + +V I+T
Sbjct: 156 RYPEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFCRNTLSARSVIDYINT 215
Query: 113 NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM--RSWCGMVQPESLLEDLVP 170
+ + W T EG +V + S P ++++ + M + G PE LL L
Sbjct: 216 HTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANRMMIVGRFEGDCTPEELLRRLQS 275
Query: 171 FMDGGPRE-QHAKVSHKRPRGSSTTPQQKNK--DKPDIENEELLQALAASMETIKXXXXX 227
+ A+ + T +Q+++ ++ + +EE + + ++
Sbjct: 276 VTNANEVWLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRERDAVRQAEEA 335
Query: 228 XXXXXXXXXXXXXEASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPI 287
E + + ++P EP D V +LP G R++R F +TD +
Sbjct: 336 VEQARRDVELRKEEIARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSV 395
Query: 288 QLLWSYCYSQLEGSEMKPFRLTHAIP 313
++ Y + + + F +T P
Sbjct: 396 LDVYHYLFCHPDSPD--EFEITTNFP 419
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 342 324 0.00086 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 619 (66 KB)
Total size of DFA: 244 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.03u 0.09s 27.12t Elapsed: 00:00:02
Total cpu time: 27.04u 0.09s 27.13t Elapsed: 00:00:02
Start: Sat May 11 13:04:45 2013 End: Sat May 11 13:04:47 2013