BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019378
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14048|UBX2_SCHPO UBX domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1
Length = 427
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 33/304 (10%)
Query: 51 LASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI 110
LA L+RPP+ ++ N S ++A+ AS Q +W+LVNLQ++ F +LNRD W +E+V + I
Sbjct: 145 LAKLFRPPYDIISNLSLDEARIEASSQKRWILVNLQTSTSFECQVLNRDLWKDESVKEVI 204
Query: 111 STNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 170
+F+F Q+ DD G + +Y + S P + ++DP TG++++ W P + L
Sbjct: 205 RAHFLFLQLLDDEEPGMEFKRFYPVRSTPHIAILDPRTGERVKEWSKSFTPADFVIALND 264
Query: 171 FMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASM---ETIKDASGV 227
F++G ++ + K P G+ + QK + E+E++ +A+AAS+ + ++ G
Sbjct: 265 FLEGCTLDETS--GRKNPLGAKS---QKPVEAMS-EDEQMHKAIAASLGNGNSTTESQGE 318
Query: 228 SSS---------DTDVASTDKDEASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQ 278
SSS D V D E A E P + R+ +R+P+G R
Sbjct: 319 SSSQQAESHGVADDTVHKIDSAECDAEEPSPGPN-----------VTRIQIRMPNGARFI 367
Query: 279 RNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMIS 338
R F TDP+ +++Y EG++ +PF LT SLD T +++G+ N +
Sbjct: 368 RRFSLTDPVSKVYAYVKGVAEGADKQPFSLTFQRKSLWTSLDS----TIKEAGIQNTALQ 423
Query: 339 VTWE 342
++
Sbjct: 424 FEFQ 427
>sp|Q5REY7|UBXN7_PONAB UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2
Length = 489
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 20 AFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDK 79
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+K
Sbjct: 110 GFRDFQTETIR---QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNK 166
Query: 80 WLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIP 139
WL++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 167 WLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFP 226
Query: 140 VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKN 199
V ++DP TGQK+ W + S L+ + F+ H + G S++P +K
Sbjct: 227 YVSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLG----------EHGQLDGLSSSPPKKC 275
Query: 200 KDKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 276 ARSESLIDASEDSQLEAAIRASLQ 299
>sp|O94888|UBXN7_HUMAN UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2
Length = 489
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 20 AFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDK 79
FR+F E R E E D LA L+RPP LM GSFE AK+ +Q+K
Sbjct: 110 GFRDFQTETIR---QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNK 166
Query: 80 WLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIP 139
WL++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P
Sbjct: 167 WLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFP 226
Query: 140 VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKN 199
V ++DP TGQK+ W + S L+ + F+ H + G S++P +K
Sbjct: 227 YVSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLG----------EHGQLDGLSSSPPKKC 275
Query: 200 KDKPDI----ENEELLQALAASME 219
+ E+ +L A+ AS++
Sbjct: 276 ARSESLIDASEDSQLEAAIRASLQ 299
>sp|Q6P5G6|UBXN7_MOUSE UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2
Length = 467
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 26/212 (12%)
Query: 12 LHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAK 71
L EP L R ++E++ G D LA L+RPP LM GSFE AK
Sbjct: 88 LVEPEPLFGVRQ-EQELRNGGA----------IDKKLTTLADLFRPPIDLMHKGSFETAK 136
Query: 72 DAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCT 131
+ +Q+KWL++N+Q+ ++F+ LNRD W+NEAV I +FIFWQVY D+ EG++
Sbjct: 137 ECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQ 196
Query: 132 YYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGS 191
+YKL P V ++DP TGQK+ W + S L+ + F+ H + G
Sbjct: 197 FYKLGDFPYVSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLG----------EHGQLDGL 245
Query: 192 STTPQQKNKDKPDI----ENEELLQALAASME 219
S++P +K + E+ +L A+ AS++
Sbjct: 246 SSSPPKKCARSESLIDASEDSQLEAAIRASLQ 277
>sp|Q55BU7|UBXN7_DICDI UBX domain-containing protein 7 homolog OS=Dictyostelium discoideum
GN=ubxd7 PE=4 SV=1
Length = 503
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 15/212 (7%)
Query: 20 AFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDK 79
AFR+F++E G+ + + A + +L+ L++PP ++ G+F++ K A +
Sbjct: 112 AFRDFEKER---GINQDK------ATEKQKSLSELFKPPLDILTFGTFDEIKKMAEQKKY 162
Query: 80 WLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIP 139
++LVN+Q +EF LNRDTW+N+ + + I NF+FWQV EGK Y + P
Sbjct: 163 FVLVNIQDVQEFDCQKLNRDTWSNKDLKELIGENFVFWQVNSANPEGKWFTQIYPVFKFP 222
Query: 140 VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPRE-QHAKVSHKRPRGSSTTPQQK 198
+ ++DP TGQK++ G + E + + LV F+ Q G+S K
Sbjct: 223 YIAIIDPRTGQKLQDMTGFIDAEEMAQYLVTFLSTNSFSGQIDPPPSSSSSGAS-----K 277
Query: 199 NKDKPDIENEELLQALAASMETIKDASGVSSS 230
+ K + E+EEL A+A S++ ++ + S S
Sbjct: 278 KQKKYNTEDEELELAIALSLKQEQERNSKSGS 309
>sp|Q06682|UBX5_YEAST UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1
Length = 500
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 46 SSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEA 105
S LA L+RPPF +M + AK A + KW+++N+Q + F LNRD W++
Sbjct: 203 SKEQKLALLFRPPFSIMSKLDLDAAKQKARAKQKWIMINIQDSGIFQCQALNRDLWSSRP 262
Query: 106 VSQTISTNFIFWQVYDDTSEGKKVCTYYKL---DSIPVVLVVDPITGQKMRSWCGMVQ-P 161
V I NF+F Q ++ + +Y L D +P + ++DPITG++++ W +V P
Sbjct: 263 VKTIIKENFVFLQYQYESRNAQPYLQFYHLNNKDDLPHIAILDPITGERVKQWNRVVPIP 322
Query: 162 ESLLEDLVPFMDG---GPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASM 218
E + ++ F+ P+ + V+ P+ TT ++ + + I+ + ++
Sbjct: 323 EQFISEINEFLASFSLDPKVPNPTVNEPLPKVDPTTLTEEQQMELAIKESLNNNSSKSNQ 382
Query: 219 ETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQ 278
E + S+ + + D S E +P P +P + R+ +R DG R+
Sbjct: 383 EEVP-----STGEEQKRVQEPDPFSTIEARVHPEPPNKP----GITTRIQIRTGDGSRLV 433
Query: 279 RNF-LRTDPIQLLWSYCYSQLEGSEMKPFRLT-HAIPGATKSLDYDSKLTFEDSGLANA 335
R F D ++ ++ ++++G F L H L+ +T D+GL N+
Sbjct: 434 RRFNALEDTVRTIYEVIKTEMDGFADSRFTLNDHQREDLIDKLN----MTIADAGLKNS 488
>sp|Q6GQ69|FAF2B_XENLA FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1
Length = 445
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 111/270 (41%), Gaps = 31/270 (11%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L S R+T V+ I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCTSEVTHFINSRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + P + ++ + ++M G++QP+ L+ L ++
Sbjct: 213 SNKPEGFRVSQALHESTYPFLAMI-MLKDRRMTVVGRLEGLIQPQDLINQLTFIIEAN-- 269
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 237
Q VS + R + +++ + ++ +A S+ ++ D
Sbjct: 270 -QTYLVSERLER--------EERNQTQVLRQQQDEAYLVSLRADQEKERKKKEKQDQKRR 320
Query: 238 DKDEASATE--------------KPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLR 283
+++EA + + LP EP D ++ ++P+G R++R FL
Sbjct: 321 EEEEAQRKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLF 380
Query: 284 TDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 313
T + ++ + +S E E F++ + P
Sbjct: 381 TQSLSVIHDFLFSLKETPE--KFQIVTSFP 408
>sp|Q28BP9|FAF2_XENTR FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1
Length = 445
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 103/255 (40%), Gaps = 21/255 (8%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L S R+T V+ +++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCIPEVTNFLNSRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L ++
Sbjct: 213 TNKPEGFRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPQDLINQLTFIVEAN-- 269
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 237
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKKEKQEQKRREEEE 324
Query: 238 DKDEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPI 287
+ + E+ + LP EP D ++ ++P+G R++R FL T +
Sbjct: 325 AQLKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSL 384
Query: 288 QLLWSYCYSQLEGSE 302
++ + +S E E
Sbjct: 385 SVIHDFLFSLKETPE 399
>sp|Q96CS3|FAF2_HUMAN FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2
Length = 445
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 37/299 (12%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L S R+T V I+T +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN-- 269
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 237
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERKRRKEEE 324
Query: 238 DKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRNFLRT 284
+ + A E+ + E+ +R L C ++ +LP+ R++R F +
Sbjct: 325 VQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFS 381
Query: 285 DPIQLLWSYCYSQLEGSEM------KPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMI 337
+ ++ + +S E E P R+ IP S ++ + T +++GL++ +
Sbjct: 382 QSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIP----SEEWPNPPTLQEAGLSHTEV 436
>sp|Q2HJD0|FAF2_BOVIN FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1
Length = 445
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 104/262 (39%), Gaps = 30/262 (11%)
Query: 57 PPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIF 116
P F+L G++ +A + A + ++LLV L S R+T V I+T +F
Sbjct: 152 PVFYL---GTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLF 208
Query: 117 WQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMD 173
W + EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 209 WACSTNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMD 267
Query: 174 GGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTD 233
Q VS + R Q + ++E L +L A E +
Sbjct: 268 AN---QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERKRR 320
Query: 234 VASTDKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRN 280
+ + A E+ + E+ +R L C ++ +LP+ R++R
Sbjct: 321 KEEEVQQQKLAEERRRRNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPNDSRVERR 377
Query: 281 FLRTDPIQLLWSYCYSQLEGSE 302
F + + ++ + +S E E
Sbjct: 378 FHFSQSLTVIHDFLFSLKESPE 399
>sp|Q6AZH6|FAF2A_XENLA FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1
Length = 445
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 23/266 (8%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L S R+T V+ I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCTPEVTHFINSRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L ++
Sbjct: 213 TNKPEGFRVSQALRENTYPFLGMI-MLKDRRMTVVGRLEGLMQPQDLINQLTFIIEAN-- 269
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 237
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNETQVLRQQ----QDEAYLVSLRADQEKERKKKEKQEQKRREEEE 324
Query: 238 DKDEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPI 287
+ + E+ + LP EP D ++ ++P+G R++R FL T +
Sbjct: 325 AQRKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSL 384
Query: 288 QLLWSYCYSQLEGSEMKPFRLTHAIP 313
++ + +S E E F++ + P
Sbjct: 385 SVIHDFLFSLKETPE--KFQIVTSFP 408
>sp|Q3TDN2|FAF2_MOUSE FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=2 SV=2
Length = 445
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 119/299 (39%), Gaps = 37/299 (12%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A + A + ++LLV L S R+ V I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACS 212
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN-- 269
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 237
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREEKERKRRKEEE 324
Query: 238 DKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRNFLRT 284
+ + A E+ + E+ +R L C ++ +LP+ R++R F +
Sbjct: 325 VQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFS 381
Query: 285 DPIQLLWSYCYSQLEGSEM------KPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMI 337
+ ++ + +S E E P R+ +P S ++ + T +++GL++ +
Sbjct: 382 QSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVP----SEEWPNPPTLQEAGLSHTEV 436
>sp|Q5BK32|FAF2_RAT FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1
Length = 346
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 100/258 (38%), Gaps = 27/258 (10%)
Query: 61 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 120
+ + G++ +A A + ++LLV L S R+ V I++ +FW
Sbjct: 54 VFYQGTYSQALSDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACS 113
Query: 121 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 177
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 114 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN-- 170
Query: 178 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 237
Q VS + R Q + ++E L +L A E +
Sbjct: 171 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERKRRKEEE 225
Query: 238 DKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRNFLRT 284
+ + A E+ + E+ +R L C ++ +LP+ R++R F +
Sbjct: 226 VQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPDSVKIIFKLPNDSRVERRFHFS 282
Query: 285 DPIQLLWSYCYSQLEGSE 302
+ ++ + +S E E
Sbjct: 283 QSLTVIHDFLFSLKESPE 300
>sp|Q9QZ49|UBXN8_MOUSE UBX domain-containing protein 8 OS=Mus musculus GN=Ubxn8 PE=1 SV=1
Length = 277
Score = 38.1 bits (87), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 206 ENEELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSLLC 265
E+ E + AS ETI + + ++ A + P LPEEP +
Sbjct: 139 EDSEFENSSQASFETINGEAARRQNLPKFSTEISPAARPLLRKEVPDLPEEPSETAEEVV 198
Query: 266 RVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSKL 325
V +R P+GR ++R F ++ Q+L + G +RL+ + P ++L+ +
Sbjct: 199 TVALRCPNGRVLRRRFFKSWNSQVLLDWMMKV--GYHKSLYRLSTSFP--RRALEVEGGS 254
Query: 326 TFEDSGL 332
+ ED G+
Sbjct: 255 SLEDIGI 261
>sp|Q9JL58|KCNK9_CAVPO Potassium channel subfamily K member 9 OS=Cavia porcellus GN=KCNK9
PE=1 SV=1
Length = 365
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 109 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 157
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 158 MVQPESLLEDLV 169
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q3A7A9|CBID_PELCD Putative cobalt-precorrin-6A synthase [deacetylating] OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=cbiD PE=3
SV=1
Length = 350
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 31/130 (23%)
Query: 169 VPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVS 228
+P +DG +H+ P G+ + D PD+ N L+ A V
Sbjct: 36 IPLLDGTRESLPLAYAHRLPDGAEAAVYKNAGDDPDVTNGALIIAR------------VV 83
Query: 229 SSDTDVASTDKDEASATEKPAYPILPEEPKV----------------DRSLLCRVGVRLP 272
+SD + + KP + P EP + DR L RV + +P
Sbjct: 84 ASDKPLEFRAGEGVGIITKPGLALPPGEPAINPGPRLMIESAVREVTDRGL--RVTIAIP 141
Query: 273 DGRRM-QRNF 281
DG+++ +R F
Sbjct: 142 DGKQLAERTF 151
>sp|Q9ES08|KCNK9_RAT Potassium channel subfamily K member 9 OS=Rattus norvegicus
GN=Kcnk9 PE=1 SV=2
Length = 396
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 109 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 157
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 158 MVQPESLLEDLV 169
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q9ZRU9|LSM4_FAGSY Probable U6 snRNA-associated Sm-like protein LSm4 OS=Fagus
sylvatica GN=LSM4 PE=2 SV=1
Length = 148
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 81 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNF---IFWQVYDDTSEGKKV 129
+LV L+S + ++ H++N DTW N + + I T+ FW++ D G +
Sbjct: 15 MLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPDCYIRGNTI 66
>sp|Q3LS21|KCNK9_MOUSE Potassium channel subfamily K member 9 OS=Mus musculus GN=Kcnk9
PE=2 SV=1
Length = 402
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 109 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 157
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 158 MVQPESLLEDLV 169
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q08743|YO292_YEAST Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR292C PE=1 SV=1
Length = 309
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 79 KWLLVNLQSTK--EFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLD 136
WLL+ + T +F+SH R +AN AV T+ TN + + + D ++ Y +D
Sbjct: 57 HWLLLVIWVTSLWKFTSHY--RQLYANSAVFATLCTNILLFGISDILAQSIACFYSYHVD 114
Query: 137 SIPVVL 142
IP +L
Sbjct: 115 PIPQIL 120
>sp|P54731|FAF1_MOUSE FAS-associated factor 1 OS=Mus musculus GN=Faf1 PE=1 SV=2
Length = 649
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 109/276 (39%), Gaps = 29/276 (10%)
Query: 61 LMFNGSFEKAKDAA---SVQDKWLL-VNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIF 116
+ F GS E A A +D+ LL + L + +++ E++ +S NFI
Sbjct: 350 VFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFIT 409
Query: 117 W--QVYDDTSEGK--KVCTYY------------KLDSIPVVLVV--DPITGQKMRSWCGM 158
W + DT+ + +C + K D P+ L++ + + + G
Sbjct: 410 WAWDLTKDTNRARFLTMCNRHFGSVIAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGN 469
Query: 159 VQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASM 218
+ L+ L+ M+ +Q + + R + +++ + + L+A A
Sbjct: 470 TTVDELMMRLMAAMEIFSAQQQEDIKDEDEREARENVKREQDEAYRLS----LEADRAKR 525
Query: 219 ETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSL-LCRVGVRLPDGRRM 277
E + + ++E A LP EPK + + + ++ +R P G +
Sbjct: 526 EAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFL 585
Query: 278 QRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 313
+R FL ++ +Q+++ + S+ G F+L P
Sbjct: 586 ERRFLASNKLQIVFDFVASK--GFPWDEFKLLSTFP 619
>sp|O74498|UCP10_SCHPO UBX domain-containing protein 10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1
Length = 427
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 253 LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYC-YSQLEGSEMKPF-RLTH 310
LP EP + R+ +R PDG R R F + D ++ +++Y Y E E + F R T
Sbjct: 317 LPPEPSSEDEP-ARLSIRFPDGSRAVRRFKKDDTVESVYNYVDYMLFEKEEPEEFGRATS 375
Query: 311 AIPGATKSLDYDSKLTFE 328
+ T DY F+
Sbjct: 376 SSNPVTPPSDYKHDFHFQ 393
>sp|Q9UNN5|FAF1_HUMAN FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2
Length = 650
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 104/261 (39%), Gaps = 29/261 (11%)
Query: 61 LMFNGSFEKAKDAA---SVQDKWLL-VNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIF 116
+ F GS E A A +D+ LL + L + +++ E++ +S NFI
Sbjct: 351 VFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFIT 410
Query: 117 WQVYDDTSEGKK-----VCTYY------------KLDSIPVVLVV--DPITGQKMRSWCG 157
W +D T + + +C + K D P+ L++ + + + G
Sbjct: 411 W-AWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQG 469
Query: 158 MVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAAS 217
+ L+ L+ M+ +Q + + R + +++ + + L+A A
Sbjct: 470 NTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLS----LEADRAK 525
Query: 218 METIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSL-LCRVGVRLPDGRR 276
E + + ++E A LP EPK + + + ++ +R P G
Sbjct: 526 REAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEF 585
Query: 277 MQRNFLRTDPIQLLWSYCYSQ 297
++R FL ++ +Q+++ + S+
Sbjct: 586 LERRFLASNKLQIVFDFVASK 606
>sp|O77713|ADA2B_DUGDU Alpha-2B adrenergic receptor (Fragment) OS=Dugong dugon GN=ADRA2B
PE=3 SV=2
Length = 390
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 181 AKVSHKRPRGSSTTPQQKNKDKP---DIENEEL--LQALAASMETIKDASGVSSSDTDVA 235
AK SH+R G+ P++ +P D L L LA+S+ +A+G S +
Sbjct: 186 AKRSHRRGPGAKGGPRKGESKQPHSLDSGPSALANLPTLASSLAVAGEANGHSMPPGEKE 245
Query: 236 -STDKDEASATEKPAYPILPEEPKVDRSLLC 265
T +D + T P++P+LP + + +C
Sbjct: 246 RETSEDPGTPTLPPSWPVLPNSGQGQKGGVC 276
>sp|O00124|UBXN8_HUMAN UBX domain-containing protein 8 OS=Homo sapiens GN=UBXN8 PE=1 SV=2
Length = 270
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 243 SATEKPA---YPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLE 299
S E+P P LPEEP + V +R P G ++R FL++ Q+L+ +
Sbjct: 167 SPAEQPTCKEIPDLPEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRI-- 224
Query: 300 GSEMKPFRLTHAIPGATKSLDYDSKLTFEDSGLA 333
G + + L+ + P + L + + ED G+
Sbjct: 225 GYHISLYSLSTSFP--RRPLAVEGGQSLEDIGIT 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,288,072
Number of Sequences: 539616
Number of extensions: 5411910
Number of successful extensions: 11782
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 11733
Number of HSP's gapped (non-prelim): 68
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)