Query 019380
Match_columns 342
No_of_seqs 244 out of 3129
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 15:11:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019380.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019380hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wlj_A Interferon stimulated g 100.0 1.5E-31 5.2E-36 229.7 13.0 162 123-299 4-171 (189)
2 2gui_A DNA polymerase III epsi 99.9 3.8E-28 1.3E-32 209.4 9.7 158 123-299 8-187 (194)
3 2p1j_A POLIII, DNA polymerase 99.9 3.5E-28 1.2E-32 208.2 8.8 158 122-299 10-178 (186)
4 1w0h_A 3'-5' exonuclease ERI1; 99.9 2.1E-27 7.3E-32 206.3 8.8 168 123-299 9-197 (204)
5 3mxm_B Three prime repair exon 99.9 1.1E-26 3.8E-31 206.7 8.0 164 120-299 8-217 (242)
6 3cg7_A CRN-4, cell death-relat 99.9 6.8E-27 2.3E-31 215.0 5.4 194 123-333 18-259 (308)
7 2xri_A ERI1 exoribonuclease 3; 99.9 2.3E-26 7.7E-31 202.7 8.4 157 124-299 31-216 (224)
8 1zbh_A 3'-5' exonuclease ERI1; 99.9 1.6E-25 5.3E-30 205.5 10.2 167 123-298 77-264 (299)
9 3u3y_B Three prime repair exon 99.9 1.4E-25 4.7E-30 204.7 9.7 167 121-299 9-217 (314)
10 1y97_A Three prime repair exon 99.9 7.2E-25 2.5E-29 194.8 10.7 166 122-299 8-212 (238)
11 1zbu_A ERI-1 homolog, 3'-5' ex 99.9 3.6E-25 1.2E-29 206.2 8.5 167 123-298 127-314 (349)
12 2f96_A Ribonuclease T; RNAse, 99.9 4.6E-25 1.6E-29 194.3 8.2 169 122-300 27-216 (224)
13 2igi_A Oligoribonuclease; RNAs 99.9 9.5E-25 3.2E-29 185.9 5.4 153 123-297 4-177 (180)
14 3v9w_A Ribonuclease T; DEDD nu 99.9 9.7E-24 3.3E-28 187.2 8.3 168 122-299 35-223 (235)
15 3tr8_A Oligoribonuclease; tran 99.9 4.9E-24 1.7E-28 181.4 4.3 154 122-297 7-181 (186)
16 2gbz_A Oligoribonuclease; ORN, 99.9 2.8E-23 9.5E-28 178.9 7.0 148 122-299 7-183 (194)
17 2qxf_A Exodeoxyribonuclease I; 99.9 7.7E-23 2.6E-27 197.6 8.8 164 123-302 8-206 (482)
18 2lt7_A Transcriptional regulat 99.7 5E-18 1.7E-22 136.9 3.7 88 9-108 17-108 (133)
19 2i13_A AART; DNA binding, zinc 99.7 8.1E-18 2.8E-22 143.7 5.0 106 10-117 17-144 (190)
20 2i13_A AART; DNA binding, zinc 99.7 1.4E-17 4.7E-22 142.2 3.7 106 10-117 45-172 (190)
21 2dlq_A GLI-kruppel family memb 99.7 1.6E-16 5.6E-21 125.6 7.8 94 9-116 2-104 (124)
22 1tf6_A Protein (transcription 99.6 2.3E-16 8E-21 134.5 7.5 107 10-118 8-148 (190)
23 2jp9_A Wilms tumor 1; DNA bind 99.6 5.2E-16 1.8E-20 121.8 5.8 95 9-117 1-107 (119)
24 2ee8_A Protein ODD-skipped-rel 99.6 2.6E-15 8.9E-20 115.5 9.6 93 5-109 8-104 (106)
25 2rpc_A Zinc finger protein ZIC 99.6 1.2E-15 4.3E-20 125.6 7.8 100 10-110 21-154 (155)
26 2dmd_A Zinc finger protein 64, 99.6 2E-15 6.8E-20 113.9 7.6 86 8-107 2-93 (96)
27 1ubd_C Protein (YY1 zinc finge 99.6 1.1E-15 3.8E-20 121.0 5.5 86 11-109 2-95 (124)
28 2gli_A Protein (five-finger GL 99.5 6.9E-15 2.4E-19 120.9 7.5 106 12-117 1-141 (155)
29 1tf6_A Protein (transcription 99.5 8.9E-15 3E-19 124.7 7.0 102 10-116 38-174 (190)
30 2yt9_A Zinc finger-containing 99.5 1.8E-14 6.2E-19 108.4 7.0 82 9-104 2-92 (95)
31 2dmi_A Teashirt homolog 3; zin 99.5 3E-14 1E-18 111.3 8.4 93 9-111 14-113 (115)
32 1a1h_A QGSR zinc finger peptid 99.5 8.7E-15 3E-19 108.9 5.0 81 11-105 1-89 (90)
33 1wjp_A Zinc finger protein 295 99.5 2.8E-14 9.6E-19 110.0 6.5 90 8-110 10-102 (107)
34 2kmk_A Zinc finger protein GFI 99.5 3.3E-14 1.1E-18 103.7 4.5 76 14-103 1-82 (82)
35 2gli_A Protein (five-finger GL 99.4 1.4E-13 4.7E-18 113.1 7.1 93 9-103 29-155 (155)
36 2csh_A Zinc finger protein 297 99.4 9.2E-14 3.1E-18 107.6 5.1 81 9-104 5-91 (110)
37 4gzn_C ZFP-57, zinc finger pro 99.4 1.7E-13 5.9E-18 94.2 3.0 59 11-105 1-59 (60)
38 2ebt_A Krueppel-like factor 5; 99.4 8.5E-13 2.9E-17 100.0 7.1 86 6-103 7-100 (100)
39 1llm_C Chimera of ZIF23-GCN4; 99.3 5.4E-14 1.8E-18 104.5 -0.7 78 12-103 1-83 (88)
40 2wbs_A Krueppel-like factor 4; 99.3 2.8E-12 9.7E-17 94.9 5.7 77 11-101 2-88 (89)
41 2dlk_A Novel protein; ZF-C2H2 99.3 2.9E-12 1E-16 92.7 5.3 53 9-63 2-60 (79)
42 2j7j_A Transcription factor II 99.3 1.9E-12 6.4E-17 94.8 4.0 74 14-102 1-85 (85)
43 2cot_A Zinc finger protein 435 99.2 2.2E-11 7.5E-16 87.8 7.2 67 7-109 11-77 (77)
44 2dlq_A GLI-kruppel family memb 99.2 9E-12 3.1E-16 98.0 5.2 67 40-118 3-78 (124)
45 2lce_A B-cell lymphoma 6 prote 99.2 1.6E-11 5.4E-16 87.8 5.9 66 6-107 9-74 (74)
46 2lt7_A Transcriptional regulat 99.2 8.5E-12 2.9E-16 100.2 3.3 74 10-91 46-125 (133)
47 2ghf_A ZHX1, zinc fingers and 99.1 3.9E-11 1.3E-15 91.6 4.1 76 9-117 13-90 (102)
48 4gzn_C ZFP-57, zinc finger pro 99.1 3.1E-11 1.1E-15 82.8 2.9 38 80-117 6-43 (60)
49 2jp9_A Wilms tumor 1; DNA bind 99.1 5E-11 1.7E-15 93.0 4.3 68 40-117 2-77 (119)
50 2gqj_A Zinc finger protein KIA 99.1 3.7E-11 1.3E-15 91.0 2.2 75 24-110 6-86 (98)
51 1x5w_A Zinc finger protein 64, 99.1 1.3E-10 4.5E-15 82.0 4.9 65 8-108 3-67 (70)
52 2lv2_A Insulinoma-associated p 99.1 9.9E-11 3.4E-15 86.3 4.0 52 9-62 23-75 (85)
53 1x6h_A Transcriptional repress 99.0 5.9E-11 2E-15 87.1 2.7 74 10-115 11-84 (86)
54 1x6h_A Transcriptional repress 99.0 2.2E-10 7.6E-15 83.9 5.7 40 12-53 45-85 (86)
55 3uk3_C Zinc finger protein 217 99.0 7.4E-11 2.5E-15 79.6 2.8 50 11-62 1-51 (57)
56 1x6e_A Zinc finger protein 24; 99.0 3E-10 1E-14 80.6 3.8 63 8-106 8-70 (72)
57 2wbt_A B-129; zinc finger; 2.7 99.0 7.8E-11 2.7E-15 93.6 0.3 80 11-105 38-127 (129)
58 2ej4_A Zinc finger protein ZIC 99.0 1.3E-09 4.5E-14 81.4 6.9 70 13-110 24-94 (95)
59 2ctu_A Zinc finger protein 483 98.9 7.4E-12 2.5E-16 88.9 -5.4 69 28-112 4-73 (73)
60 2dmi_A Teashirt homolog 3; zin 98.9 2.1E-11 7.2E-16 94.9 -3.4 82 28-117 5-91 (115)
61 2adr_A ADR1; transcription reg 98.9 4.5E-10 1.6E-14 76.5 3.8 48 13-62 1-49 (60)
62 2drp_A Protein (tramtrack DNA- 98.9 3.3E-10 1.1E-14 78.8 2.8 60 9-103 5-65 (66)
63 1ubd_C Protein (YY1 zinc finge 98.9 8.6E-10 2.9E-14 86.6 5.5 85 11-107 31-123 (124)
64 2d9h_A Zinc finger protein 692 98.9 3E-10 1E-14 81.8 2.5 67 9-108 2-69 (78)
65 1f2i_G Fusion of N-terminal 17 98.9 6.3E-10 2.1E-14 79.0 4.0 61 1-63 6-69 (73)
66 2eps_A POZ-, at HOOK-, and zin 98.9 1.5E-09 5.2E-14 72.4 5.0 48 7-56 5-54 (54)
67 1bbo_A Human enhancer-binding 98.9 1E-09 3.5E-14 73.8 3.8 56 14-105 1-56 (57)
68 2rpc_A Zinc finger protein ZIC 98.9 2.2E-09 7.4E-14 87.8 5.7 73 45-117 27-133 (155)
69 2ct1_A Transcriptional repress 98.9 1.5E-09 5.3E-14 77.9 4.2 62 9-104 10-71 (77)
70 2ctd_A Zinc finger protein 512 98.9 2.2E-09 7.5E-14 80.9 5.2 73 22-108 14-93 (96)
71 2ctd_A Zinc finger protein 512 98.8 1.4E-09 4.9E-14 82.0 3.1 50 11-63 31-83 (96)
72 2csh_A Zinc finger protein 297 98.8 2.4E-09 8.1E-14 82.3 4.0 66 39-117 5-76 (110)
73 2dmd_A Zinc finger protein 64, 98.8 4E-09 1.4E-13 78.8 5.0 67 39-117 3-75 (96)
74 1x5w_A Zinc finger protein 64, 98.8 2.7E-09 9.2E-14 75.1 3.8 38 80-117 11-48 (70)
75 2dlk_A Novel protein; ZF-C2H2 98.8 3.1E-09 1.1E-13 76.5 4.0 64 40-115 3-77 (79)
76 2ct1_A Transcriptional repress 98.8 9.6E-10 3.3E-14 79.0 1.1 38 80-117 17-56 (77)
77 2gqj_A Zinc finger protein KIA 98.8 2E-09 6.8E-14 81.3 2.8 53 9-63 19-74 (98)
78 2ghf_A ZHX1, zinc fingers and 98.8 3.1E-09 1.1E-13 80.9 3.1 38 80-117 20-61 (102)
79 2ee8_A Protein ODD-skipped-rel 98.8 1.1E-08 3.9E-13 77.8 6.2 65 41-117 14-84 (106)
80 2epr_A POZ-, at HOOK-, and zin 98.7 9.1E-09 3.1E-13 66.7 4.4 43 7-51 5-48 (48)
81 2yt9_A Zinc finger-containing 98.7 8.1E-09 2.8E-13 77.0 4.5 66 40-117 3-76 (95)
82 1x6e_A Zinc finger protein 24; 98.7 3.2E-09 1.1E-13 75.2 2.1 38 80-117 16-53 (72)
83 1wjp_A Zinc finger protein 295 98.7 2.2E-09 7.6E-14 82.2 1.3 69 34-117 8-80 (107)
84 2epa_A Krueppel-like factor 10 98.7 1.6E-08 5.6E-13 71.4 4.9 57 5-63 8-69 (72)
85 2epq_A POZ-, at HOOK-, and zin 98.7 1.3E-08 4.4E-13 64.9 3.6 41 8-50 4-45 (45)
86 2kfn_A Klenow fragment of DNA 98.7 6.6E-08 2.3E-12 96.5 10.5 145 125-299 27-195 (605)
87 2drp_A Protein (tramtrack DNA- 98.7 5.8E-09 2E-13 72.3 1.6 38 80-117 12-51 (66)
88 2kmk_A Zinc finger protein GFI 98.6 1E-08 3.5E-13 74.0 2.8 52 10-63 25-77 (82)
89 4hec_A Putative uncharacterize 98.6 1.7E-07 5.7E-12 79.0 10.2 153 125-297 23-182 (190)
90 2elz_A Zinc finger protein 224 98.6 2.9E-08 9.9E-13 63.5 4.1 39 9-49 7-46 (46)
91 2ytn_A Zinc finger protein 347 98.6 3.2E-08 1.1E-12 63.3 4.3 39 9-49 7-46 (46)
92 2ytq_A Zinc finger protein 268 98.6 3.1E-08 1.1E-12 63.4 4.2 39 9-49 7-46 (46)
93 2eq4_A Zinc finger protein 224 98.6 3.2E-08 1.1E-12 63.2 4.3 39 9-49 7-46 (46)
94 1a1h_A QGSR zinc finger peptid 98.6 1.5E-08 5E-13 74.7 2.8 52 10-63 30-82 (90)
95 2em0_A Zinc finger protein 224 98.6 3.1E-08 1.1E-12 63.3 4.0 39 9-49 7-46 (46)
96 2emk_A Zinc finger protein 28 98.6 3.1E-08 1.1E-12 63.4 4.0 39 9-49 7-46 (46)
97 2emf_A Zinc finger protein 484 98.6 2.8E-08 9.4E-13 63.6 3.7 39 9-49 7-46 (46)
98 2emx_A Zinc finger protein 268 98.6 2.8E-08 9.5E-13 62.9 3.6 39 9-49 5-44 (44)
99 2eop_A Zinc finger protein 268 98.6 3.3E-08 1.1E-12 63.1 4.1 39 9-49 7-46 (46)
100 2epz_A Zinc finger protein 28 98.6 3.5E-08 1.2E-12 63.1 4.1 39 9-49 7-46 (46)
101 2el4_A Zinc finger protein 268 98.6 3E-08 1E-12 63.4 3.8 39 9-49 7-46 (46)
102 2em7_A Zinc finger protein 224 98.6 3.1E-08 1E-12 63.4 3.8 39 9-49 7-46 (46)
103 2eoq_A Zinc finger protein 224 98.6 3.4E-08 1.1E-12 63.2 4.0 39 9-49 7-46 (46)
104 2d9h_A Zinc finger protein 692 98.6 2.4E-08 8.3E-13 71.6 3.7 38 80-117 9-49 (78)
105 2eml_A Zinc finger protein 28 98.6 3.1E-08 1.1E-12 63.3 3.8 39 9-49 7-46 (46)
106 2enc_A Zinc finger protein 224 98.6 3.6E-08 1.2E-12 63.0 4.1 39 9-49 7-46 (46)
107 2ene_A Zinc finger protein 347 98.6 3.1E-08 1.1E-12 63.3 3.8 39 9-49 7-46 (46)
108 2eoe_A Zinc finger protein 347 98.6 3.5E-08 1.2E-12 63.1 4.0 39 9-49 7-46 (46)
109 2eq0_A Zinc finger protein 347 98.6 3.2E-08 1.1E-12 63.3 3.7 39 9-49 7-46 (46)
110 2ep2_A Zinc finger protein 484 98.6 3.3E-08 1.1E-12 63.2 3.8 39 9-49 7-46 (46)
111 2el6_A Zinc finger protein 268 98.6 3.8E-08 1.3E-12 63.0 4.0 39 9-49 7-46 (46)
112 2ytr_A Zinc finger protein 347 98.6 3.7E-08 1.3E-12 62.9 3.9 39 9-49 7-46 (46)
113 2emm_A ZFP-95, zinc finger pro 98.6 3E-08 1E-12 63.4 3.5 39 9-49 7-46 (46)
114 2eov_A Zinc finger protein 484 98.6 3.9E-08 1.3E-12 62.8 4.0 39 9-49 7-46 (46)
115 2emy_A Zinc finger protein 268 98.6 3E-08 1E-12 63.4 3.4 39 9-49 7-46 (46)
116 2ysp_A Zinc finger protein 224 98.6 3.3E-08 1.1E-12 63.2 3.6 39 9-49 7-46 (46)
117 2em5_A ZFP-95, zinc finger pro 98.6 3.9E-08 1.3E-12 62.9 3.8 39 9-49 7-46 (46)
118 2wbt_A B-129; zinc finger; 2.7 98.6 1.4E-08 4.9E-13 80.3 2.0 51 10-63 70-120 (129)
119 2ytm_A Zinc finger protein 28 98.6 3.1E-08 1.1E-12 63.4 3.3 39 9-49 7-46 (46)
120 2ytj_A Zinc finger protein 484 98.6 4E-08 1.4E-12 62.8 3.8 39 9-49 7-46 (46)
121 2em9_A Zinc finger protein 224 98.6 4.1E-08 1.4E-12 62.7 3.9 39 9-49 7-46 (46)
122 2ytd_A Zinc finger protein 473 98.6 3.6E-08 1.2E-12 63.1 3.5 39 9-49 7-46 (46)
123 2ema_A Zinc finger protein 347 98.6 3.7E-08 1.3E-12 62.9 3.6 39 9-49 7-46 (46)
124 2en8_A Zinc finger protein 224 98.6 4.3E-08 1.5E-12 62.6 3.9 39 9-49 7-46 (46)
125 2epx_A Zinc finger protein 28 98.6 5E-08 1.7E-12 62.6 4.2 39 9-49 7-47 (47)
126 2ytk_A Zinc finger protein 347 98.6 3.6E-08 1.2E-12 63.0 3.5 39 9-49 7-46 (46)
127 2eme_A Zinc finger protein 473 98.6 4.4E-08 1.5E-12 62.5 3.9 39 9-49 7-46 (46)
128 2lv2_A Insulinoma-associated p 98.6 3.5E-08 1.2E-12 72.5 3.7 57 39-105 23-84 (85)
129 2eoo_A ZFP-95, zinc finger pro 98.6 2.9E-08 9.9E-13 63.5 2.9 39 9-49 7-46 (46)
130 2epw_A Zinc finger protein 268 98.6 3.4E-08 1.2E-12 63.1 3.2 39 9-49 7-46 (46)
131 2ely_A Zinc finger protein 224 98.6 3.1E-08 1.1E-12 63.4 3.0 39 9-49 7-46 (46)
132 2en6_A Zinc finger protein 268 98.6 3.8E-08 1.3E-12 62.9 3.4 39 9-49 7-46 (46)
133 2ep0_A Zinc finger protein 28 98.6 4.6E-08 1.6E-12 62.5 3.8 39 9-49 7-46 (46)
134 2em8_A Zinc finger protein 224 98.6 3.3E-08 1.1E-12 63.3 3.0 39 9-49 7-46 (46)
135 2eod_A TNF receptor-associated 98.6 1.8E-08 6.2E-13 70.0 1.9 59 10-106 6-65 (66)
136 2en1_A Zinc finger protein 224 98.6 4.5E-08 1.6E-12 62.5 3.6 39 9-49 7-46 (46)
137 1bbo_A Human enhancer-binding 98.6 4.3E-08 1.5E-12 65.6 3.6 38 80-117 3-40 (57)
138 2emh_A Zinc finger protein 484 98.6 3.5E-08 1.2E-12 63.1 3.1 39 9-49 7-46 (46)
139 2yso_A ZFP-95, zinc finger pro 98.5 4.3E-08 1.5E-12 62.6 3.5 39 9-49 7-46 (46)
140 2emp_A Zinc finger protein 347 98.5 3.5E-08 1.2E-12 63.1 3.0 39 9-49 7-46 (46)
141 1x9m_A DNA polymerase; DNA plo 98.5 2.3E-08 7.8E-13 101.3 2.4 135 126-299 1-185 (698)
142 2ep3_A Zinc finger protein 484 98.5 6.2E-08 2.1E-12 61.9 3.6 39 9-49 7-46 (46)
143 3uk3_C Zinc finger protein 217 98.5 4.7E-08 1.6E-12 65.4 3.1 47 45-103 6-57 (57)
144 2ytt_A Zinc finger protein 473 98.5 3.9E-08 1.3E-12 62.9 2.5 40 8-49 6-46 (46)
145 2ytg_A ZFP-95, zinc finger pro 98.5 3.2E-08 1.1E-12 63.3 2.0 39 9-49 7-46 (46)
146 2yu8_A Zinc finger protein 347 98.5 3.1E-08 1.1E-12 63.3 2.0 39 9-49 7-46 (46)
147 2em2_A Zinc finger protein 28 98.5 8.7E-08 3E-12 61.2 3.7 39 9-49 7-46 (46)
148 2wbs_A Krueppel-like factor 4; 98.5 5.7E-08 1.9E-12 71.3 3.1 53 9-63 30-85 (89)
149 1vd4_A Transcription initiatio 98.5 2.5E-08 8.4E-13 68.5 0.8 49 9-62 9-58 (62)
150 2yte_A Zinc finger protein 473 98.5 1.5E-07 5.2E-12 58.7 4.1 37 9-47 5-42 (42)
151 2ebt_A Krueppel-like factor 5; 98.5 1.2E-07 4.1E-12 71.1 4.2 52 10-63 41-95 (100)
152 2yrm_A B-cell lymphoma 6 prote 98.4 1.3E-07 4.5E-12 59.5 3.7 38 8-47 4-42 (43)
153 1x3c_A Zinc finger protein 292 98.4 2.3E-07 7.8E-12 64.4 5.1 43 4-48 17-63 (73)
154 2el5_A Zinc finger protein 268 98.4 1.6E-07 5.4E-12 58.6 3.6 37 9-47 5-42 (42)
155 2ept_A Zinc finger protein 32; 98.4 1.8E-07 6.2E-12 58.0 3.7 36 9-46 5-41 (41)
156 2enf_A Zinc finger protein 347 98.4 2.2E-07 7.5E-12 59.3 4.1 38 9-48 7-45 (46)
157 2eln_A Zinc finger protein 406 98.4 1.6E-07 5.6E-12 57.7 3.2 33 8-42 3-37 (38)
158 2eon_A ZFP-95, zinc finger pro 98.4 2E-07 6.7E-12 59.6 3.7 38 9-48 7-45 (46)
159 2ytp_A Zinc finger protein 484 98.4 1.9E-07 6.4E-12 59.6 3.6 38 9-48 7-45 (46)
160 2em6_A Zinc finger protein 224 98.4 2.5E-07 8.7E-12 59.0 4.1 38 9-48 7-45 (46)
161 2emj_A Zinc finger protein 28 98.4 2E-07 6.8E-12 59.5 3.6 38 9-48 7-45 (46)
162 2yti_A Zinc finger protein 347 98.4 2.3E-07 7.9E-12 59.1 3.9 38 9-48 7-45 (46)
163 2ytf_A Zinc finger protein 268 98.4 2.2E-07 7.4E-12 59.2 3.8 38 9-48 7-45 (46)
164 2em4_A Zinc finger protein 28 98.4 2E-07 7E-12 59.4 3.6 38 9-48 7-45 (46)
165 2epu_A Zinc finger protein 32; 98.4 1.9E-07 6.6E-12 59.2 3.5 37 9-47 7-44 (45)
166 2eoh_A Zinc finger protein 28 98.4 2.7E-07 9.4E-12 58.8 4.2 37 9-47 7-44 (46)
167 2emg_A Zinc finger protein 484 98.4 2.6E-07 8.9E-12 58.9 4.0 38 9-48 7-45 (46)
168 2yts_A Zinc finger protein 484 98.4 2.4E-07 8.3E-12 59.0 3.8 38 9-48 7-45 (46)
169 2en9_A Zinc finger protein 28 98.4 2.6E-07 8.7E-12 59.0 3.9 38 9-48 7-45 (46)
170 2yth_A Zinc finger protein 224 98.4 2.8E-07 9.5E-12 58.8 4.0 38 9-48 7-45 (46)
171 2eom_A ZFP-95, zinc finger pro 98.4 2.6E-07 8.9E-12 59.0 3.9 37 9-47 7-44 (46)
172 2epc_A Zinc finger protein 32; 98.4 2.3E-07 7.9E-12 57.8 3.5 36 9-46 6-42 (42)
173 2ep1_A Zinc finger protein 484 98.4 2.7E-07 9.3E-12 58.7 3.9 38 9-48 7-45 (46)
174 2eq2_A Zinc finger protein 347 98.4 2.4E-07 8.1E-12 59.1 3.6 38 9-48 7-45 (46)
175 2emi_A Zinc finger protein 484 98.4 2.6E-07 9E-12 58.9 3.8 38 9-48 7-45 (46)
176 2eoj_A Zinc finger protein 268 98.4 2.3E-07 7.9E-12 58.5 3.4 37 9-47 7-44 (44)
177 2eow_A Zinc finger protein 347 98.4 2.3E-07 8E-12 59.1 3.4 38 9-48 7-45 (46)
178 2ent_A Krueppel-like factor 15 98.4 2.9E-07 9.8E-12 59.2 3.8 39 9-49 7-48 (48)
179 2eos_A B-cell lymphoma 6 prote 98.4 2.4E-07 8.1E-12 57.8 3.3 36 9-46 6-42 (42)
180 2enh_A Zinc finger protein 28 98.4 2.5E-07 8.6E-12 59.0 3.5 37 9-47 7-44 (46)
181 2eof_A Zinc finger protein 268 98.4 2.9E-07 1E-11 57.9 3.7 37 9-47 7-44 (44)
182 2em3_A Zinc finger protein 28 98.4 2.6E-07 8.9E-12 58.9 3.5 38 9-48 7-45 (46)
183 2en7_A Zinc finger protein 268 98.4 2.9E-07 1E-11 57.9 3.6 37 9-47 7-44 (44)
184 2yrj_A Zinc finger protein 473 98.4 3.1E-07 1.1E-11 58.5 3.8 38 9-48 7-45 (46)
185 2eq1_A Zinc finger protein 347 98.4 3.1E-07 1E-11 58.6 3.7 38 9-48 7-45 (46)
186 2adr_A ADR1; transcription reg 98.4 2.6E-07 8.9E-12 62.4 3.6 48 45-104 4-57 (60)
187 1srk_A Zinc finger protein ZFP 98.3 3.5E-07 1.2E-11 54.5 3.7 34 9-44 2-35 (35)
188 1llm_C Chimera of ZIF23-GCN4; 98.3 3.1E-08 1.1E-12 72.9 -1.3 58 45-115 5-67 (88)
189 2elx_A Zinc finger protein 406 98.3 3.4E-07 1.2E-11 54.4 3.6 33 10-44 3-35 (35)
190 2eod_A TNF receptor-associated 98.3 1.6E-07 5.6E-12 65.0 2.4 36 80-117 12-48 (66)
191 2yto_A Zinc finger protein 484 98.3 3E-07 1E-11 58.6 3.5 37 9-47 7-44 (46)
192 1f2i_G Fusion of N-terminal 17 98.3 1.3E-07 4.4E-12 66.7 1.8 61 29-102 5-73 (73)
193 2yu5_A Zinc finger protein 473 98.3 2.5E-07 8.7E-12 58.3 3.0 37 9-47 7-44 (44)
194 2eoz_A Zinc finger protein 473 98.3 2.8E-07 9.6E-12 58.8 3.1 37 9-47 7-44 (46)
195 2ytb_A Zinc finger protein 32; 98.3 2.6E-07 8.7E-12 57.6 2.9 36 9-46 6-42 (42)
196 2emb_A Zinc finger protein 473 98.3 3.8E-07 1.3E-11 57.5 3.7 37 9-47 7-44 (44)
197 2epv_A Zinc finger protein 268 98.3 4E-07 1.4E-11 57.5 3.7 36 9-46 7-43 (44)
198 2eou_A Zinc finger protein 473 98.3 3.6E-07 1.2E-11 57.6 3.6 37 9-47 7-44 (44)
199 2eor_A Zinc finger protein 224 98.3 2.6E-07 8.9E-12 58.8 2.8 38 9-48 7-45 (46)
200 2en2_A B-cell lymphoma 6 prote 98.3 2.2E-07 7.4E-12 58.0 2.3 36 9-46 6-42 (42)
201 2elo_A Zinc finger protein 406 98.3 3.6E-07 1.2E-11 55.2 3.2 34 9-44 4-37 (37)
202 2eq3_A Zinc finger protein 347 98.3 3.9E-07 1.3E-11 58.0 3.5 37 9-47 7-44 (46)
203 2eoy_A Zinc finger protein 473 98.3 3.1E-07 1.1E-11 58.5 3.0 37 9-47 7-45 (46)
204 2ctu_A Zinc finger protein 483 98.3 3.1E-08 1.1E-12 69.7 -2.1 56 9-72 13-73 (73)
205 1njq_A Superman protein; zinc- 98.3 5.5E-07 1.9E-11 55.2 3.5 33 10-44 2-34 (39)
206 2emz_A ZFP-95, zinc finger pro 98.3 3.1E-07 1.1E-11 58.5 2.4 37 9-47 7-44 (46)
207 2epr_A POZ-, at HOOK-, and zin 98.3 4.4E-07 1.5E-11 58.5 3.0 35 80-114 14-48 (48)
208 2eox_A Zinc finger protein 473 98.2 2.8E-07 9.6E-12 58.1 1.5 37 9-47 7-44 (44)
209 2elv_A Zinc finger protein 406 98.2 7.5E-07 2.6E-11 53.4 3.4 32 9-42 4-35 (36)
210 2elr_A Zinc finger protein 406 98.2 1E-06 3.6E-11 52.6 3.8 33 8-42 3-35 (36)
211 2eoq_A Zinc finger protein 224 98.2 1E-06 3.5E-11 56.0 3.9 33 80-112 14-46 (46)
212 2elq_A Zinc finger protein 406 98.2 9.9E-07 3.4E-11 52.8 3.6 32 9-42 4-35 (36)
213 2epp_A POZ-, at HOOK-, and zin 98.2 1.1E-06 3.9E-11 60.9 4.4 40 9-50 8-47 (66)
214 2j7j_A Transcription factor II 98.2 4.3E-07 1.5E-11 65.7 2.3 50 10-63 27-81 (85)
215 2emk_A Zinc finger protein 28 98.2 1E-06 3.6E-11 56.0 3.8 33 80-112 14-46 (46)
216 2en3_A ZFP-95, zinc finger pro 98.2 3.5E-07 1.2E-11 58.2 1.5 37 9-47 7-44 (46)
217 2ep2_A Zinc finger protein 484 98.2 8.7E-07 3E-11 56.4 3.3 33 80-112 14-46 (46)
218 1rim_A E6APC2 peptide; E6-bind 98.2 8.2E-07 2.8E-11 52.3 2.9 30 13-44 1-30 (33)
219 2ytj_A Zinc finger protein 484 98.2 9.7E-07 3.3E-11 56.1 3.4 33 80-112 14-46 (46)
220 2ely_A Zinc finger protein 224 98.2 9.6E-07 3.3E-11 56.2 3.4 33 80-112 14-46 (46)
221 2elz_A Zinc finger protein 224 98.2 1E-06 3.5E-11 56.0 3.5 33 80-112 14-46 (46)
222 2elt_A Zinc finger protein 406 98.2 9.8E-07 3.3E-11 52.8 3.2 32 9-42 4-35 (36)
223 2eq4_A Zinc finger protein 224 98.2 1.2E-06 4.2E-11 55.6 3.9 33 80-112 14-46 (46)
224 2em0_A Zinc finger protein 224 98.2 1.4E-06 4.7E-11 55.4 4.1 33 80-112 14-46 (46)
225 2epz_A Zinc finger protein 28 98.2 1.1E-06 3.6E-11 55.9 3.5 33 80-112 14-46 (46)
226 2eop_A Zinc finger protein 268 98.2 1.3E-06 4.6E-11 55.4 3.9 33 80-112 14-46 (46)
227 2els_A Zinc finger protein 406 98.2 1E-06 3.6E-11 52.7 3.1 32 9-42 4-35 (36)
228 2ytq_A Zinc finger protein 268 98.2 1.2E-06 4E-11 55.8 3.5 33 80-112 14-46 (46)
229 2eov_A Zinc finger protein 484 98.2 1.4E-06 4.7E-11 55.3 3.7 33 80-112 14-46 (46)
230 1x6f_A Zinc finger protein 462 98.2 6.1E-07 2.1E-11 66.2 2.2 43 8-52 19-62 (88)
231 2ytn_A Zinc finger protein 347 98.2 1.3E-06 4.3E-11 55.6 3.5 33 80-112 14-46 (46)
232 2epq_A POZ-, at HOOK-, and zin 98.2 1E-06 3.5E-11 55.8 2.8 34 80-113 12-45 (45)
233 2eoo_A ZFP-95, zinc finger pro 98.1 9.1E-07 3.1E-11 56.3 2.6 33 80-112 14-46 (46)
234 2ytm_A Zinc finger protein 28 98.1 1.1E-06 3.8E-11 55.9 2.8 33 80-112 14-46 (46)
235 2emf_A Zinc finger protein 484 98.1 1.3E-06 4.5E-11 55.5 3.1 33 80-112 14-46 (46)
236 2el4_A Zinc finger protein 268 98.1 1.4E-06 4.7E-11 55.4 3.2 33 80-112 14-46 (46)
237 1p7a_A BF3, BKLF, kruppel-like 98.1 1.8E-06 6.1E-11 52.0 3.5 31 9-41 6-36 (37)
238 2em7_A Zinc finger protein 224 98.1 1.4E-06 4.8E-11 55.4 3.2 33 80-112 14-46 (46)
239 2eq0_A Zinc finger protein 347 98.1 1.4E-06 4.7E-11 55.4 3.1 33 80-112 14-46 (46)
240 2ema_A Zinc finger protein 347 98.1 1.5E-06 5.2E-11 55.2 3.1 33 80-112 14-46 (46)
241 2eoe_A Zinc finger protein 347 98.1 1.5E-06 5.1E-11 55.2 3.1 33 80-112 14-46 (46)
242 2eml_A Zinc finger protein 28 98.1 1.7E-06 5.7E-11 55.0 3.3 33 80-112 14-46 (46)
243 2ene_A Zinc finger protein 347 98.1 1.5E-06 5.2E-11 55.2 3.1 33 80-112 14-46 (46)
244 1yui_A GAGA-factor; complex (D 98.1 1.2E-06 3.9E-11 58.0 2.6 45 51-107 4-53 (54)
245 2ytk_A Zinc finger protein 347 98.1 1.4E-06 4.7E-11 55.4 2.8 33 80-112 14-46 (46)
246 2em5_A ZFP-95, zinc finger pro 98.1 1.5E-06 5.3E-11 55.2 3.1 33 80-112 14-46 (46)
247 2m0d_A Zinc finger and BTB dom 98.1 1.7E-06 5.9E-11 49.0 2.9 29 12-42 1-29 (30)
248 2emm_A ZFP-95, zinc finger pro 98.1 1.5E-06 5.2E-11 55.1 3.0 33 80-112 14-46 (46)
249 2emy_A Zinc finger protein 268 98.1 1.5E-06 5.1E-11 55.2 2.9 33 80-112 14-46 (46)
250 2ytr_A Zinc finger protein 347 98.1 1.7E-06 5.9E-11 54.9 3.1 33 80-112 14-46 (46)
251 2kvg_A Zinc finger and BTB dom 98.1 1.3E-06 4.5E-11 48.7 2.3 27 12-40 1-27 (27)
252 2emx_A Zinc finger protein 268 98.1 1.5E-06 5.2E-11 54.6 2.8 33 80-112 12-44 (44)
253 2el6_A Zinc finger protein 268 98.1 1.9E-06 6.4E-11 54.8 3.2 33 80-112 14-46 (46)
254 2epw_A Zinc finger protein 268 98.1 1.8E-06 6E-11 54.8 3.1 33 80-112 14-46 (46)
255 2kvh_A Zinc finger and BTB dom 98.1 1.8E-06 6E-11 48.0 2.7 27 12-40 1-27 (27)
256 2elm_A Zinc finger protein 406 98.1 1.4E-06 5E-11 52.6 2.5 32 9-42 4-36 (37)
257 2ytg_A ZFP-95, zinc finger pro 98.1 1.5E-06 5E-11 55.3 2.6 33 80-112 14-46 (46)
258 2ytd_A Zinc finger protein 473 98.1 1.8E-06 6.3E-11 54.8 2.9 33 80-112 14-46 (46)
259 2em9_A Zinc finger protein 224 98.1 2.1E-06 7.1E-11 54.5 3.2 33 80-112 14-46 (46)
260 2emh_A Zinc finger protein 484 98.1 1.5E-06 5E-11 55.3 2.4 33 80-112 14-46 (46)
261 2enc_A Zinc finger protein 224 98.1 2E-06 6.9E-11 54.6 3.1 33 80-112 14-46 (46)
262 2en6_A Zinc finger protein 268 98.1 1.6E-06 5.6E-11 55.1 2.6 33 80-112 14-46 (46)
263 2ep0_A Zinc finger protein 28 98.1 2E-06 6.7E-11 54.6 3.0 33 80-112 14-46 (46)
264 2eme_A Zinc finger protein 473 98.1 2.3E-06 7.8E-11 54.3 3.3 33 80-112 14-46 (46)
265 2kvf_A Zinc finger and BTB dom 98.1 2E-06 6.7E-11 48.2 2.7 28 12-41 1-28 (28)
266 2ysp_A Zinc finger protein 224 98.1 1.7E-06 5.7E-11 55.0 2.6 33 80-112 14-46 (46)
267 2em8_A Zinc finger protein 224 98.1 1.6E-06 5.6E-11 55.1 2.5 33 80-112 14-46 (46)
268 1fv5_A First zinc finger of U- 98.1 2E-06 6.9E-11 52.0 2.7 28 9-36 3-30 (36)
269 2emp_A Zinc finger protein 347 98.1 1.6E-06 5.5E-11 55.1 2.4 33 80-112 14-46 (46)
270 2elp_A Zinc finger protein 406 98.1 1.3E-06 4.6E-11 52.6 1.9 32 9-42 4-36 (37)
271 2en1_A Zinc finger protein 224 98.1 2.1E-06 7.3E-11 54.5 2.9 33 80-112 14-46 (46)
272 3iuf_A Zinc finger protein UBI 98.1 2.2E-06 7.4E-11 55.3 2.9 34 9-44 2-36 (48)
273 2en8_A Zinc finger protein 224 98.1 2.2E-06 7.5E-11 54.4 2.9 33 80-112 14-46 (46)
274 2yso_A ZFP-95, zinc finger pro 98.1 2.1E-06 7.3E-11 54.5 2.9 33 80-112 14-46 (46)
275 2epx_A Zinc finger protein 28 98.1 2.7E-06 9.3E-11 54.1 3.4 33 80-112 14-47 (47)
276 2yu8_A Zinc finger protein 347 98.1 1.6E-06 5.5E-11 55.1 2.2 33 80-112 14-46 (46)
277 2ytt_A Zinc finger protein 473 98.0 1.5E-06 5E-11 55.3 1.9 33 80-112 14-46 (46)
278 2yth_A Zinc finger protein 224 98.0 4.1E-06 1.4E-10 53.2 4.0 32 80-111 14-45 (46)
279 2ep3_A Zinc finger protein 484 98.0 2.5E-06 8.4E-11 54.2 2.9 33 80-112 14-46 (46)
280 2ep1_A Zinc finger protein 484 98.0 4.3E-06 1.5E-10 52.9 4.0 32 80-111 14-45 (46)
281 1ard_A Yeast transcription fac 98.0 3.3E-06 1.1E-10 47.5 2.9 28 13-42 1-28 (29)
282 1yui_A GAGA-factor; complex (D 98.0 3.1E-06 1E-10 55.9 2.9 33 10-44 20-52 (54)
283 2eon_A ZFP-95, zinc finger pro 98.0 3.6E-06 1.2E-10 53.5 3.2 32 80-111 14-45 (46)
284 1bhi_A CRE-BP1, ATF-2; CRE bin 98.0 2.9E-06 1E-10 51.3 2.6 33 10-44 2-36 (38)
285 2eps_A POZ-, at HOOK-, and zin 98.0 4.6E-06 1.6E-10 55.1 3.7 36 81-116 15-51 (54)
286 1va1_A Transcription factor SP 98.0 2.8E-06 9.5E-11 51.3 2.4 32 9-42 3-36 (37)
287 2em2_A Zinc finger protein 28 98.0 3.6E-06 1.2E-10 53.4 2.9 33 80-112 14-46 (46)
288 2yrm_A B-cell lymphoma 6 prote 98.0 3.9E-06 1.3E-10 52.5 3.1 32 80-111 12-43 (43)
289 1rik_A E6APC1 peptide; E6-bind 98.0 2.5E-06 8.4E-11 48.1 1.9 28 13-42 1-28 (29)
290 2enh_A Zinc finger protein 28 98.0 4.8E-06 1.6E-10 52.8 3.4 32 80-111 14-45 (46)
291 2eq1_A Zinc finger protein 347 98.0 6.1E-06 2.1E-10 52.3 3.8 32 80-111 14-45 (46)
292 2en7_A Zinc finger protein 268 98.0 5.5E-06 1.9E-10 51.8 3.6 31 80-110 14-44 (44)
293 2eoh_A Zinc finger protein 28 98.0 5E-06 1.7E-10 52.8 3.4 32 80-111 14-45 (46)
294 1zfd_A SWI5; DNA binding motif 98.0 3.9E-06 1.3E-10 48.6 2.6 29 12-42 1-31 (32)
295 2epa_A Krueppel-like factor 10 98.0 4.4E-06 1.5E-10 58.5 3.3 53 39-101 12-72 (72)
296 1sp2_A SP1F2; zinc finger, tra 98.0 5.1E-06 1.8E-10 47.7 3.1 28 13-42 1-30 (31)
297 2enf_A Zinc finger protein 347 98.0 4.6E-06 1.6E-10 52.9 3.1 32 80-111 14-45 (46)
298 2emg_A Zinc finger protein 484 98.0 5.1E-06 1.7E-10 52.7 3.2 32 80-111 14-45 (46)
299 2eq2_A Zinc finger protein 347 97.9 5.5E-06 1.9E-10 52.5 3.3 32 80-111 14-45 (46)
300 2yti_A Zinc finger protein 347 97.9 5.1E-06 1.7E-10 52.7 3.1 32 80-111 14-45 (46)
301 2ytp_A Zinc finger protein 484 97.9 4.8E-06 1.6E-10 52.8 3.0 32 80-111 14-45 (46)
302 2eom_A ZFP-95, zinc finger pro 97.9 5E-06 1.7E-10 52.8 3.0 32 80-111 14-45 (46)
303 2m0f_A Zinc finger and BTB dom 97.9 3.3E-06 1.1E-10 47.4 1.9 28 13-42 1-28 (29)
304 2em3_A Zinc finger protein 28 97.9 4.9E-06 1.7E-10 52.7 2.9 32 80-111 14-45 (46)
305 2yts_A Zinc finger protein 484 97.9 5.4E-06 1.8E-10 52.5 3.0 32 80-111 14-45 (46)
306 2el5_A Zinc finger protein 268 97.9 5.7E-06 1.9E-10 51.3 3.1 31 80-110 12-42 (42)
307 2emi_A Zinc finger protein 484 97.9 5.9E-06 2E-10 52.4 3.2 32 80-111 14-45 (46)
308 2epu_A Zinc finger protein 32; 97.9 4.7E-06 1.6E-10 52.6 2.6 32 80-111 14-45 (45)
309 2ytf_A Zinc finger protein 268 97.9 5.3E-06 1.8E-10 52.5 2.8 32 80-111 14-45 (46)
310 2kfq_A FP1; protein, de novo p 97.9 4.8E-07 1.6E-11 52.9 -2.1 30 13-44 1-30 (32)
311 2emj_A Zinc finger protein 28 97.9 5.2E-06 1.8E-10 52.7 2.8 32 80-111 14-45 (46)
312 2em6_A Zinc finger protein 224 97.9 6.2E-06 2.1E-10 52.3 3.1 32 80-111 14-45 (46)
313 2lvr_A Zinc finger and BTB dom 97.1 1.4E-06 4.9E-11 49.5 0.0 29 12-42 1-29 (30)
314 2eow_A Zinc finger protein 347 97.9 5.4E-06 1.8E-10 52.5 2.8 32 80-111 14-45 (46)
315 2en9_A Zinc finger protein 28 97.9 5.9E-06 2E-10 52.4 3.0 32 80-111 14-45 (46)
316 2em4_A Zinc finger protein 28 97.9 5.4E-06 1.8E-10 52.6 2.7 32 80-111 14-45 (46)
317 2yrj_A Zinc finger protein 473 97.9 6E-06 2.1E-10 52.3 2.9 32 80-111 14-45 (46)
318 1klr_A Zinc finger Y-chromosom 97.9 4.9E-06 1.7E-10 47.0 2.2 29 13-43 1-29 (30)
319 4dfk_A DNA polymerase I, therm 97.9 3.6E-06 1.2E-10 82.4 2.7 122 121-297 7-128 (540)
320 2ytb_A Zinc finger protein 32; 97.9 7.1E-06 2.4E-10 50.7 3.2 30 80-109 13-42 (42)
321 2eoj_A Zinc finger protein 268 97.9 6E-06 2.1E-10 51.7 2.7 31 80-110 14-44 (44)
322 2ept_A Zinc finger protein 32; 97.9 7.1E-06 2.4E-10 50.5 2.9 30 80-109 12-41 (41)
323 2lvt_A Zinc finger and BTB dom 97.1 1.7E-06 6E-11 48.9 0.0 28 13-42 1-28 (29)
324 2eor_A Zinc finger protein 224 97.9 5.4E-06 1.8E-10 52.5 2.3 32 80-111 14-45 (46)
325 2eou_A Zinc finger protein 473 97.9 7E-06 2.4E-10 51.5 2.8 31 80-110 14-44 (44)
326 4gmj_B CCR4-NOT transcription 97.9 8.1E-05 2.8E-09 66.6 10.6 158 124-298 34-246 (285)
327 2eof_A Zinc finger protein 268 97.9 7.4E-06 2.5E-10 51.2 2.8 31 80-110 14-44 (44)
328 1znf_A 31ST zinc finger from X 97.9 8.2E-06 2.8E-10 45.0 2.7 26 14-41 1-26 (27)
329 1paa_A Yeast transcription fac 97.9 5.6E-06 1.9E-10 47.0 2.0 28 13-42 1-29 (30)
330 1rim_A E6APC2 peptide; E6-bind 97.9 8.2E-06 2.8E-10 47.8 2.8 29 80-108 4-32 (33)
331 2m0e_A Zinc finger and BTB dom 97.9 3.8E-06 1.3E-10 47.1 1.2 28 13-42 1-28 (29)
332 2yte_A Zinc finger protein 473 97.9 9E-06 3.1E-10 50.3 3.1 31 80-110 12-42 (42)
333 2emb_A Zinc finger protein 473 97.8 9.1E-06 3.1E-10 50.9 3.0 31 80-110 14-44 (44)
334 2epc_A Zinc finger protein 32; 97.8 8.8E-06 3E-10 50.3 2.8 30 80-109 13-42 (42)
335 2eoy_A Zinc finger protein 473 97.8 8.9E-06 3.1E-10 51.5 2.9 32 80-111 14-46 (46)
336 2eoz_A Zinc finger protein 473 97.8 7.7E-06 2.6E-10 51.8 2.4 32 80-111 14-45 (46)
337 2eos_A B-cell lymphoma 6 prote 97.8 9.1E-06 3.1E-10 50.3 2.7 30 80-109 13-42 (42)
338 2eq3_A Zinc finger protein 347 97.8 9.4E-06 3.2E-10 51.3 2.8 32 80-111 14-45 (46)
339 2yto_A Zinc finger protein 484 97.8 8.8E-06 3E-10 51.6 2.6 31 80-110 14-44 (46)
340 1vd4_A Transcription initiatio 97.8 1E-06 3.5E-11 60.2 -2.1 44 31-76 3-49 (62)
341 2yu5_A Zinc finger protein 473 97.8 1.1E-05 3.6E-10 50.6 2.9 31 80-110 14-44 (44)
342 2lvu_A Zinc finger and BTB dom 97.0 2.7E-06 9.2E-11 46.8 0.0 24 13-36 1-24 (26)
343 2lce_A B-cell lymphoma 6 prote 97.8 8.3E-06 2.8E-10 57.4 2.5 38 80-117 19-56 (74)
344 1x3c_A Zinc finger protein 292 97.8 1.7E-05 5.8E-10 55.0 3.9 30 82-111 33-63 (73)
345 2ent_A Krueppel-like factor 15 97.8 1.3E-05 4.4E-10 51.1 3.0 32 81-112 15-48 (48)
346 2emz_A ZFP-95, zinc finger pro 97.8 8.7E-06 3E-10 51.6 1.8 32 80-111 14-45 (46)
347 2cot_A Zinc finger protein 435 97.8 1.8E-05 6.1E-10 56.2 3.6 36 9-46 41-77 (77)
348 2en2_A B-cell lymphoma 6 prote 97.7 9.6E-06 3.3E-10 50.2 1.9 30 80-109 13-42 (42)
349 3saf_A Exosome component 10; e 97.7 8E-05 2.7E-09 70.8 9.0 83 215-299 180-279 (428)
350 2d9k_A FLN29 gene product; zin 97.7 1.1E-05 3.7E-10 57.5 2.3 49 10-63 13-62 (75)
351 2eox_A Zinc finger protein 473 97.7 1.2E-05 4E-10 50.4 1.8 31 80-110 14-44 (44)
352 2en3_A ZFP-95, zinc finger pro 97.7 1.1E-05 3.9E-10 51.0 1.5 31 80-110 14-44 (46)
353 2epv_A Zinc finger protein 268 97.7 2.4E-05 8.1E-10 49.0 3.0 30 80-109 14-43 (44)
354 1njq_A Superman protein; zinc- 97.7 2.2E-05 7.7E-10 47.7 2.7 30 80-109 8-37 (39)
355 1ncs_A Peptide M30F, transcrip 97.6 8.6E-06 3E-10 52.1 0.1 32 9-42 13-46 (47)
356 2ab3_A ZNF29; zinc finger prot 97.6 3.1E-05 1.1E-09 43.3 2.4 27 13-41 1-29 (29)
357 2elx_A Zinc finger protein 406 97.6 4E-05 1.4E-09 45.0 2.5 27 80-106 9-35 (35)
358 2kfq_A FP1; protein, de novo p 97.5 7E-06 2.4E-10 47.7 -1.2 28 80-107 4-31 (32)
359 1znf_A 31ST zinc finger from X 97.5 5.8E-05 2E-09 41.4 2.4 25 80-104 3-27 (27)
360 1srk_A Zinc finger protein ZFP 97.5 6.4E-05 2.2E-09 44.2 2.6 27 80-106 9-35 (35)
361 1klr_A Zinc finger Y-chromosom 97.5 6.2E-05 2.1E-09 42.2 2.4 27 80-106 4-30 (30)
362 2elo_A Zinc finger protein 406 97.4 5E-05 1.7E-09 45.3 2.0 27 80-106 11-37 (37)
363 2ej4_A Zinc finger protein ZIC 97.4 0.00016 5.5E-09 53.1 5.2 52 66-117 13-73 (95)
364 1rik_A E6APC1 peptide; E6-bind 97.4 6.1E-05 2.1E-09 42.0 2.2 26 80-105 4-29 (29)
365 2d9k_A FLN29 gene product; zin 97.4 1.4E-05 4.6E-10 56.9 -1.2 62 29-106 4-70 (75)
366 1ard_A Yeast transcription fac 97.4 8.1E-05 2.8E-09 41.4 2.4 26 80-105 4-29 (29)
367 2m0d_A Zinc finger and BTB dom 97.4 8.4E-05 2.9E-09 41.6 2.3 26 80-105 5-30 (30)
368 2m0e_A Zinc finger and BTB dom 97.3 8.6E-05 3E-09 41.2 1.9 26 80-105 4-29 (29)
369 2m0f_A Zinc finger and BTB dom 97.3 7.7E-05 2.6E-09 41.5 1.6 26 80-105 4-29 (29)
370 2e6m_A Werner syndrome ATP-dep 97.3 0.00059 2E-08 58.2 8.0 84 215-299 94-197 (208)
371 1x6f_A Zinc finger protein 462 97.3 4E-05 1.4E-09 56.3 0.3 38 80-117 27-64 (88)
372 2elr_A Zinc finger protein 406 97.3 0.00013 4.5E-09 43.0 2.4 26 80-105 11-36 (36)
373 1sp2_A SP1F2; zinc finger, tra 97.3 0.00015 5.2E-09 41.2 2.6 23 83-105 9-31 (31)
374 1noy_A Protein (DNA polymerase 97.2 0.0024 8.3E-08 59.9 12.0 159 122-293 104-335 (388)
375 1fv5_A First zinc finger of U- 97.2 8.6E-05 3E-09 44.7 1.3 18 81-98 11-28 (36)
376 2lvt_A Zinc finger and BTB dom 96.3 4.6E-05 1.6E-09 42.7 0.0 26 80-105 4-29 (29)
377 2elv_A Zinc finger protein 406 97.2 0.00016 5.4E-09 42.8 2.3 26 80-105 11-36 (36)
378 2els_A Zinc finger protein 406 97.2 0.00015 5.3E-09 42.8 2.1 26 80-105 11-36 (36)
379 2kvf_A Zinc finger and BTB dom 97.2 0.00016 5.3E-09 40.0 2.0 24 80-103 5-28 (28)
380 2elt_A Zinc finger protein 406 97.2 0.00018 6E-09 42.4 2.2 26 80-105 11-36 (36)
381 1zfd_A SWI5; DNA binding motif 97.2 0.00025 8.4E-09 40.6 2.7 26 80-105 5-32 (32)
382 1paa_A Yeast transcription fac 97.1 0.00021 7.3E-09 40.0 2.3 26 80-105 4-30 (30)
383 1bhi_A CRE-BP1, ATF-2; CRE bin 97.1 0.00018 6E-09 43.1 2.0 28 80-107 8-37 (38)
384 2lvr_A Zinc finger and BTB dom 96.2 7E-05 2.4E-09 42.1 0.0 25 80-104 5-29 (30)
385 2elq_A Zinc finger protein 406 97.1 0.00023 7.8E-09 42.0 2.3 26 80-105 11-36 (36)
386 1qht_A Protein (DNA polymerase 97.1 0.0018 6.3E-08 66.2 10.1 147 122-295 133-328 (775)
387 2kvh_A Zinc finger and BTB dom 97.1 0.00022 7.7E-09 39.0 1.9 23 80-102 5-27 (27)
388 2eln_A Zinc finger protein 406 97.1 0.00023 7.8E-09 43.3 2.0 24 81-104 12-37 (38)
389 2kvg_A Zinc finger and BTB dom 97.1 0.00019 6.6E-09 39.4 1.5 23 80-102 5-27 (27)
390 1p7a_A BF3, BKLF, kruppel-like 97.0 0.00035 1.2E-08 41.4 2.6 25 80-104 13-37 (37)
391 2a1r_A Poly(A)-specific ribonu 97.0 0.0015 5.1E-08 62.1 8.2 99 183-299 263-399 (430)
392 2elp_A Zinc finger protein 406 97.0 0.00023 8E-09 42.3 1.6 26 80-105 11-37 (37)
393 1vk0_A Hypothetical protein; h 97.0 0.00026 8.8E-09 60.5 2.3 82 215-296 106-206 (206)
394 3d45_A Poly(A)-specific ribonu 97.0 0.00086 2.9E-08 65.2 6.0 98 183-298 258-393 (507)
395 2lvu_A Zinc finger and BTB dom 96.0 0.00014 4.8E-09 39.5 0.0 23 80-102 4-26 (26)
396 2p51_A SPCC18.06C protein; DED 96.8 0.012 4.2E-07 53.3 11.8 106 177-297 130-256 (333)
397 1yt3_A Ribonuclease D, RNAse D 96.8 0.0026 8.9E-08 59.4 7.7 83 216-299 73-172 (375)
398 2epp_A POZ-, at HOOK-, and zin 96.8 0.0006 2.1E-08 47.0 2.5 27 80-106 15-41 (66)
399 3iuf_A Zinc finger protein UBI 96.8 0.00052 1.8E-08 43.7 2.0 28 80-107 9-37 (48)
400 3pv8_A DNA polymerase I; DNA p 96.8 0.00055 1.9E-08 67.7 2.9 94 193-299 69-183 (592)
401 2ab3_A ZNF29; zinc finger prot 96.8 0.00059 2E-08 37.7 1.9 24 80-103 4-29 (29)
402 1va1_A Transcription factor SP 96.7 0.00059 2E-08 40.6 1.6 25 81-105 11-37 (37)
403 2elm_A Zinc finger protein 406 96.6 0.00084 2.9E-08 39.9 1.9 25 80-104 11-36 (37)
404 1s5j_A DNA polymerase I; repli 96.5 0.012 4.1E-07 60.7 10.5 150 121-290 187-386 (847)
405 2hbj_A Exosome complex exonucl 96.3 0.0059 2E-07 57.7 6.9 83 215-299 157-256 (410)
406 1ncs_A Peptide M30F, transcrip 96.3 0.0014 4.7E-08 41.4 1.8 24 82-105 24-47 (47)
407 3qex_A DNA polymerase, GP43; d 96.3 0.022 7.6E-07 58.7 11.0 157 123-292 107-337 (903)
408 3iay_A DNA polymerase delta ca 96.1 0.014 4.7E-07 60.7 8.7 101 182-294 305-466 (919)
409 3k59_A POL II, DNA polymerase 95.9 0.028 9.5E-07 57.4 9.9 145 121-293 150-349 (786)
410 1zr9_A Zinc finger protein 593 95.8 0.0025 8.7E-08 49.3 1.3 28 9-36 45-72 (124)
411 3cym_A Uncharacterized protein 95.5 0.02 6.8E-07 54.5 6.4 90 194-299 84-189 (440)
412 2gv9_A DNA polymerase; polymer 94.8 0.082 2.8E-06 56.3 9.4 100 184-295 395-552 (1193)
413 2d5r_A CCR4-NOT transcription 94.7 0.075 2.6E-06 46.5 7.2 77 216-297 139-235 (252)
414 2e72_A POGO transposable eleme 94.4 0.023 7.8E-07 35.5 2.3 24 13-36 11-34 (49)
415 2e72_A POGO transposable eleme 93.9 0.035 1.2E-06 34.7 2.4 27 80-106 14-40 (49)
416 1zw8_A Zinc-responsive transcr 93.6 0.062 2.1E-06 36.4 3.5 57 18-102 7-64 (64)
417 1uoc_A POP2; hydrolase, DEDD n 93.1 0.09 3.1E-06 46.8 4.7 79 216-297 154-265 (289)
418 1zu1_A DSRBP-ZFA, RNA binding 92.5 0.077 2.6E-06 41.3 3.1 74 12-99 30-114 (127)
419 1zw8_A Zinc-responsive transcr 90.5 0.19 6.6E-06 33.9 3.0 34 82-115 7-49 (64)
420 3mjh_B Early endosome antigen 89.6 0.24 8.3E-06 28.8 2.5 26 15-41 6-31 (34)
421 1zr9_A Zinc finger protein 593 88.5 0.12 4E-06 40.0 0.7 21 80-100 52-72 (124)
422 1fu9_A U-shaped transcriptiona 85.7 0.74 2.5E-05 26.9 2.9 28 9-36 3-30 (36)
423 2jsp_A Transcriptional regulat 82.7 0.45 1.5E-05 34.1 1.3 26 81-109 24-49 (87)
424 2py5_A DNA polymerase; protein 79.9 1.6 5.4E-05 42.9 4.6 37 257-294 127-181 (575)
425 3ikm_A DNA polymerase subunit 77.7 0.49 1.7E-05 49.1 0.2 83 216-298 193-348 (1172)
426 3hcs_A TNF receptor-associated 77.0 1.1 3.7E-05 36.4 2.1 35 81-116 113-147 (170)
427 4ayb_P DNA-directed RNA polyme 76.1 1.3 4.4E-05 27.6 1.7 13 67-79 4-16 (48)
428 3hcs_A TNF receptor-associated 74.0 4.5 0.00015 32.6 5.1 25 81-106 140-164 (170)
429 1fu9_A U-shaped transcriptiona 72.7 2.6 8.8E-05 24.6 2.3 24 81-104 11-34 (36)
430 3mjh_B Early endosome antigen 71.6 2.2 7.6E-05 24.7 1.9 23 80-102 7-29 (34)
431 2djr_A Zinc finger BED domain- 69.8 2.1 7.3E-05 29.8 1.8 24 81-104 31-61 (76)
432 2gmg_A Hypothetical protein PF 67.9 2.9 9.9E-05 30.9 2.3 9 45-53 69-77 (105)
433 2gmg_A Hypothetical protein PF 63.5 3.8 0.00013 30.3 2.2 24 64-87 65-93 (105)
434 2k5c_A Uncharacterized protein 63.1 1.7 5.8E-05 30.4 0.2 11 45-55 10-20 (95)
435 1zu1_A DSRBP-ZFA, RNA binding 62.2 4.3 0.00015 31.2 2.5 27 10-36 89-115 (127)
436 1vq8_Z 50S ribosomal protein L 62.1 1.7 5.9E-05 30.8 0.1 9 81-89 48-56 (83)
437 1twf_L ABC10-alpha, DNA-direct 60.5 5.2 0.00018 27.3 2.4 12 14-25 28-39 (70)
438 2yrk_A Zinc finger homeobox pr 60.0 2.9 0.0001 26.8 0.9 21 15-35 14-34 (55)
439 3h0g_L DNA-directed RNA polyme 55.7 9.4 0.00032 25.4 2.9 15 11-25 18-32 (63)
440 3cc2_Z 50S ribosomal protein L 55.2 2.7 9.1E-05 31.7 0.1 27 64-90 58-90 (116)
441 1wjv_A Cell growth regulating 54.8 3.9 0.00013 28.5 0.9 46 14-63 10-56 (79)
442 2elu_A Zinc finger protein 406 54.4 6.8 0.00023 22.1 1.7 22 81-102 12-33 (37)
443 3jyw_9 60S ribosomal protein L 52.6 8.4 0.00029 26.4 2.3 8 45-52 28-35 (72)
444 2lcq_A Putative toxin VAPC6; P 51.9 5.4 0.00019 32.0 1.5 25 64-88 130-158 (165)
445 1bgx_T TAQ DNA polymerase; DNA 51.1 5.1 0.00018 41.1 1.5 67 224-298 352-421 (832)
446 2jvx_A NF-kappa-B essential mo 51.1 8.4 0.00029 21.2 1.7 22 14-35 3-24 (28)
447 1ffk_W Ribosomal protein L37AE 50.0 4.8 0.00017 27.7 0.8 10 81-90 48-57 (73)
448 3vk6_A E3 ubiquitin-protein li 49.3 16 0.00054 26.8 3.4 38 65-102 36-85 (101)
449 2xzl_A ATP-dependent helicase 47.7 13 0.00046 37.8 4.0 46 66-117 25-82 (802)
450 2yqq_A Zinc finger HIT domain- 46.5 18 0.00062 23.4 3.1 35 66-101 12-46 (56)
451 2i5o_A DNA polymerase ETA; zin 46.1 5.2 0.00018 23.9 0.4 26 10-36 5-30 (39)
452 6rxn_A Rubredoxin; electron tr 43.3 10 0.00035 23.5 1.4 9 45-53 6-14 (46)
453 2wjy_A Regulator of nonsense t 42.8 19 0.00066 36.6 4.3 59 45-118 8-78 (800)
454 2ct5_A Zinc finger BED domain 41.9 12 0.0004 25.8 1.7 23 81-103 32-57 (73)
455 2yuc_A TNF receptor-associated 39.3 33 0.0011 23.0 3.9 46 45-99 18-64 (76)
456 1vfy_A Phosphatidylinositol-3- 39.1 13 0.00044 25.3 1.6 30 45-85 13-42 (73)
457 3iz5_m 60S ribosomal protein L 38.7 11 0.00037 27.2 1.2 28 44-76 37-64 (92)
458 3vth_A Hydrogenase maturation 38.0 5.3 0.00018 40.5 -0.8 48 81-134 164-225 (761)
459 3izc_m 60S ribosomal protein R 37.6 11 0.00039 27.0 1.1 28 44-76 37-64 (92)
460 3j21_i 50S ribosomal protein L 37.6 9.5 0.00033 26.9 0.7 28 44-76 36-63 (83)
461 3ttc_A HYPF, transcriptional r 36.6 4.9 0.00017 39.9 -1.3 30 81-116 70-99 (657)
462 2ecv_A Tripartite motif-contai 35.2 89 0.0031 20.9 5.7 52 65-117 18-70 (85)
463 2czr_A TBP-interacting protein 34.4 8 0.00027 31.4 -0.1 25 15-42 155-179 (226)
464 2czr_A TBP-interacting protein 34.3 14 0.00048 30.0 1.3 22 80-102 156-177 (226)
465 2yw8_A RUN and FYVE domain-con 34.1 17 0.00059 25.4 1.6 30 45-85 21-50 (82)
466 1joc_A EEA1, early endosomal a 33.0 18 0.00062 27.5 1.7 30 45-85 71-100 (125)
467 1z2q_A LM5-1; membrane protein 32.3 19 0.00066 25.2 1.7 25 45-76 23-47 (84)
468 4a17_Y RPL37A, 60S ribosomal p 32.3 10 0.00035 27.8 0.2 13 64-76 52-64 (103)
469 1gh9_A 8.3 kDa protein (gene M 32.3 9.2 0.00031 26.2 -0.1 6 81-87 24-29 (71)
470 1dvp_A HRS, hepatocyte growth 31.6 24 0.00081 29.6 2.4 24 68-91 163-190 (220)
471 1x4u_A Zinc finger, FYVE domai 31.3 21 0.00073 25.0 1.7 30 45-85 16-45 (84)
472 1y02_A CARP2, FYVE-ring finger 29.5 21 0.00071 27.1 1.5 25 45-76 21-45 (120)
473 1wfk_A Zinc finger, FYVE domai 29.5 24 0.00082 25.0 1.8 30 45-85 11-40 (88)
474 2kdx_A HYPA, hydrogenase/ureas 28.6 22 0.00074 26.7 1.5 24 81-116 76-100 (119)
475 4rxn_A Rubredoxin; electron tr 28.5 24 0.00082 22.6 1.4 11 44-54 4-14 (54)
476 2k9h_A Glycoprotein; hantaviru 28.4 59 0.002 20.8 3.2 47 45-101 5-52 (57)
477 3zyq_A Hepatocyte growth facto 28.3 27 0.00092 29.5 2.2 31 45-86 166-196 (226)
478 4g9i_A Hydrogenase maturation 28.3 10 0.00036 38.4 -0.5 65 45-117 108-189 (772)
479 2dkt_A Ring finger and CHY zin 27.3 26 0.0009 27.4 1.7 58 15-85 28-90 (143)
480 2kiz_A E3 ubiquitin-protein li 27.1 53 0.0018 21.3 3.1 14 11-24 11-24 (69)
481 1pft_A TFIIB, PFTFIIBN; N-term 26.9 28 0.00094 21.6 1.5 6 45-50 7-12 (50)
482 2yu4_A E3 SUMO-protein ligase 26.8 41 0.0014 23.8 2.7 45 66-111 7-53 (94)
483 3t7l_A Zinc finger FYVE domain 26.7 28 0.00097 24.7 1.7 30 45-85 22-51 (90)
484 2jrp_A Putative cytoplasmic pr 26.6 15 0.00051 25.8 0.2 23 66-88 18-41 (81)
485 3pwf_A Rubrerythrin; non heme 26.3 22 0.00076 28.7 1.2 12 104-115 151-162 (170)
486 2jne_A Hypothetical protein YF 25.3 14 0.00049 26.7 -0.1 36 45-87 34-70 (101)
487 1wir_A Protein arginine N-meth 24.3 59 0.002 24.6 3.2 27 10-36 11-37 (121)
488 1e8j_A Rubredoxin; iron-sulfur 24.1 39 0.0013 21.4 1.8 11 44-54 4-14 (52)
489 3htk_C E3 SUMO-protein ligase 23.7 26 0.00088 30.5 1.2 51 10-77 177-231 (267)
490 1x4s_A Protein FON, zinc finge 23.1 37 0.0013 22.2 1.6 33 66-98 11-46 (59)
491 2xzl_A ATP-dependent helicase 23.1 35 0.0012 34.8 2.2 25 13-53 10-35 (802)
492 1lko_A Rubrerythrin all-iron(I 23.0 19 0.00064 29.7 0.2 10 106-115 171-180 (191)
493 1z60_A TFIIH basal transcripti 22.4 23 0.00078 23.2 0.5 22 81-102 33-54 (59)
494 1dvp_A HRS, hepatocyte growth 22.3 38 0.0013 28.3 2.0 9 81-89 164-172 (220)
495 3ga8_A HTH-type transcriptiona 22.1 34 0.0012 23.4 1.4 17 81-97 39-55 (78)
496 2c2l_A CHIP, carboxy terminus 21.2 66 0.0022 27.4 3.4 47 65-116 207-253 (281)
497 1wil_A KIAA1045 protein; ring 21.1 23 0.00079 25.0 0.3 10 45-54 31-40 (89)
498 2kr4_A Ubiquitin conjugation f 21.0 78 0.0027 21.8 3.2 44 66-115 14-57 (85)
499 2ecw_A Tripartite motif-contai 20.7 1.2E+02 0.0042 20.1 4.2 52 65-117 18-70 (85)
500 2kn9_A Rubredoxin; metalloprot 20.6 32 0.0011 24.1 0.9 11 66-76 27-37 (81)
No 1
>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=99.97 E-value=1.5e-31 Score=229.71 Aligned_cols=162 Identities=33% Similarity=0.537 Sum_probs=139.1
Q ss_pred CCcceecccccccccCCCcccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHHHh
Q 019380 123 GPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILN 202 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~~~~~~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~~~~l~ 202 (342)
..+++++|+||||+++....++ +.+.+|+.+|+++|+++|+|..+|+++++++||||+++|+++|++.+|+++|.+|+
T Consensus 4 ~~~~vviD~ETTGl~~~~~~~i-iei~~v~~~g~~i~~~lV~P~~~i~~~~~~i~GIt~~~l~~a~~~~~v~~~~~~~l- 81 (189)
T 1wlj_A 4 SREVVAMDCEMVGLGPHRESGL-ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLL- 81 (189)
T ss_dssp --CEEEEEEEEEEETTTTEEEE-EEEEEECTTCCEEEEEEEECSSCEEECCHHHHCCCHHHHTTCEEHHHHHHHHHHHH-
T ss_pred CCeEEEEEeECcCcCCCCCceE-EEEEEEeCCCCEEEeeEecCCCCCCccccCCCCCCHHHHcCCCCHHHHHHHHHHHH-
Confidence 4579999999999976554444 67778888999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCeEEEeeCchhhhhhccccCCCcceeeccccccc----cccCCCCccHHHHHHHHhCCcCCCC--C
Q 019380 203 NGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPL----MKTNLVSHSLKYLTRTYLGYDIQSG--V 276 (342)
Q Consensus 203 ~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~~~~~~Dt~~l~~~----~~~~~~~~~L~~l~~~~~~~~~~~~--~ 276 (342)
++.+|||||+.||+.||+..+|...++||+.++.. ..|...+++|+.|++.++|++++.+ +
T Consensus 82 -------------~~~~lV~hn~~fD~~~L~~~~~~~~~idt~~~~~~~~~~~~p~~~~~~L~~l~~~~lgi~~~~~~~~ 148 (189)
T 1wlj_A 82 -------------KGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLG 148 (189)
T ss_dssp -------------TTSEEEESSHHHHHHHTTCCCTTCEEEEGGGCHHHHHHHTC-----CCHHHHHHHHTCCCCSCCTTC
T ss_pred -------------CCCEEEECCcHHHHHHHHHhCCCCceechHhhhhhhhcccCCCCCCccHHHHHHHHcCCCCCCCCCC
Confidence 78999999999999999988888789999987532 3344578999999999669998765 9
Q ss_pred CCcHHHHHHHHHHHHHHHhhhhh
Q 019380 277 HDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 277 H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
|+|++||++|++||.+++++++.
T Consensus 149 H~Al~Da~ata~l~~~l~~~~~~ 171 (189)
T 1wlj_A 149 HSSVEDARATMELYQISQRIRAR 171 (189)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998765
No 2
>2gui_A DNA polymerase III epsilon subunit; DNA polymerase proofreading domain, transferase; HET: DNA U5P; 1.60A {Escherichia coli} SCOP: c.55.3.5 PDB: 1j54_A* 1j53_A* 2ido_A* 2xy8_A*
Probab=99.95 E-value=3.8e-28 Score=209.42 Aligned_cols=158 Identities=20% Similarity=0.326 Sum_probs=132.2
Q ss_pred CCcceecccccccccC-------CCcccccceEEeecCCCCe---EEeeecCCCCCccccccccCCCCHhhhcCCCChHH
Q 019380 123 GPKAVAMDCEMVGGGS-------NGTLDLCARVCLVDEDENV---IFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKE 192 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~~-------~~~~~il~~v~vv~~~~~~---~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~ 192 (342)
.++++++|+||||+++ ++++++ +.+.+. +|.+ .|+++|+|..+++++++++||||+++|+++|++.+
T Consensus 8 ~~~~vviD~ETTGl~~~~~~~~~~~Iiei-g~v~~~--~~~~~~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~ 84 (194)
T 2gui_A 8 ITRQIVLDTETTGMNQIGAHYEGHKIIEI-GAVEVV--NRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAE 84 (194)
T ss_dssp CCEEEEEEEEESCCCSSSSTTTTCCEEEE-EEEEEE--TTEECSCCEEEECCCSSCCCHHHHHHHCCCHHHHTTSCCHHH
T ss_pred cCCEEEEEeeCCCCCCcccCCCCCEEEEE-EEEEEE--CCeEeccEEEEEECcCCcCCHHHHHhhCcCHHHHhCCCCHHH
Confidence 4679999999999876 556666 666663 4554 49999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhccc-------cCCC----cceeeccccccccccCCCCccHH
Q 019380 193 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM-------NYPD----HMLRDTAKYRPLMKTNLVSHSLK 261 (342)
Q Consensus 193 v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~-------~~~~----~~~~Dt~~l~~~~~~~~~~~~L~ 261 (342)
|+++|.+|+ ++.+|||||+.||+.||+. ..|. ..++||+.+++.++|.. .++|+
T Consensus 85 v~~~~~~~l--------------~~~~lv~hn~~fD~~~L~~~~~~~g~~~p~~~~~~~~iDt~~l~~~~~p~~-~~~L~ 149 (194)
T 2gui_A 85 VADEFMDYI--------------RGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGK-RNSLD 149 (194)
T ss_dssp HHHHHHHHH--------------TTSEEEETTHHHHHHHHHHHHHHTCSCCCCGGGTSEEEEHHHHHHHHSTTS-CCSHH
T ss_pred HHHHHHHHH--------------CCCeEEEEchHHhHHHHHHHHHHcCCCCccccccCceeeHHHHHHHHcCCC-CCCHH
Confidence 999999999 7889999999999999982 2231 47899999988877753 57999
Q ss_pred HHHHHHhCCcCCC-CCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 262 YLTRTYLGYDIQS-GVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 262 ~l~~~~~~~~~~~-~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
.|++.| |++..+ .+|+|++||++|++||.++.++++.
T Consensus 150 ~l~~~~-gi~~~~~~~H~Al~Da~~ta~l~~~l~~~~~~ 187 (194)
T 2gui_A 150 ALCARY-EIDNSKRTLHGALLDAQILAEVYLAMTGGQTS 187 (194)
T ss_dssp HHHHHT-TCCCTTCSSCCHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHc-CcCCCCCCCCChHHHHHHHHHHHHHHHhccch
Confidence 999987 998655 4899999999999999999988654
No 3
>2p1j_A POLIII, DNA polymerase III POLC-type; structural genomics, exonuclease, PSI-2, protein structure initiative; HET: DNA; 2.50A {Thermotoga maritima MSB8}
Probab=99.95 E-value=3.5e-28 Score=208.21 Aligned_cols=158 Identities=22% Similarity=0.316 Sum_probs=132.9
Q ss_pred CCCcceecccccccccC--CCcccccceEEeecCCCCeE--EeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHH
Q 019380 122 RGPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI--FHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKI 197 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~~--~~~~~il~~v~vv~~~~~~~--~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~ 197 (342)
....++++|+||||+++ +.++++ +.+.+. +|+++ |+++|+|..+++++++++||||+++++++|++.+|+++|
T Consensus 10 ~~~~~v~iD~ETTGl~~~~~~IieI-g~v~~~--~g~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~v~~~~ 86 (186)
T 2p1j_A 10 GDATFVVLDFETTGLDPQVDEIIEI-GAVKIQ--GGQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVLPEF 86 (186)
T ss_dssp ---CEEEEEEEESCSCTTTCCEEEE-EEEEEE--TTEEEEEEEEECBCSSCCCHHHHHHHCCCHHHHTTCCBHHHHHHHH
T ss_pred cCCCEEEEEEECCCCCCCCCeEEEE-EEEEEE--CCEEEEEEEEEECcCCCCCHHHhhhcCCCHHHHhcCCCHHHHHHHH
Confidence 34679999999999863 456666 666553 56665 999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc-------ccCCCcceeeccccccccccCCCCccHHHHHHHHhCC
Q 019380 198 LEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-------MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGY 270 (342)
Q Consensus 198 ~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-------~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~ 270 (342)
.+|+ ++.+|||||+.||+.||+ +..+...++||+.+++.++ ...+++|+.|++.| |+
T Consensus 87 ~~~l--------------~~~~lv~hn~~fD~~~L~~~~~~~g~~~~~~~~iDt~~l~~~~~-~~~~~~L~~l~~~~-gi 150 (186)
T 2p1j_A 87 LGFL--------------EDSIIVAHNANFDYRFLRLWIKKVMGLDWERPYIDTLALAKSLL-KLRSYSLDSVVEKL-GL 150 (186)
T ss_dssp HHHS--------------SSCEEEETTHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHT-CCSCCSHHHHHHHT-TC
T ss_pred HHHH--------------CCCEEEEECcHHHHHHHHHHHHHcCCCCCCCCEEeHHHHHHHHh-hcCCCCHHHHHHHc-CC
Confidence 9999 788999999999999998 2233467899999988877 56789999999987 98
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 271 DIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 271 ~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
+.. ++|+|++||++|++||.+++++..+
T Consensus 151 ~~~-~~H~Al~Da~~t~~l~~~l~~~~~~ 178 (186)
T 2p1j_A 151 GPF-RHHRALDDARVTAQVFLRFVEMMKK 178 (186)
T ss_dssp CST-TCCHHHHHHHHHHHHHHHHTTCC--
T ss_pred CCC-CCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 854 5899999999999999999887543
No 4
>1w0h_A 3'-5' exonuclease ERI1; nuclease domain, hydrolase; HET: AMP; 1.59A {Homo sapiens} SCOP: c.55.3.5
Probab=99.94 E-value=2.1e-27 Score=206.26 Aligned_cols=168 Identities=17% Similarity=0.257 Sum_probs=135.7
Q ss_pred CCcceecccccccccC------CCcccccceEEeecCCCCeE--EeeecCCCC--CccccccccCCCCHhhhcCCCChHH
Q 019380 123 GPKAVAMDCEMVGGGS------NGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 192 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~~------~~~~~il~~v~vv~~~~~~~--~~~lv~p~~--~i~~~~~~i~GIt~e~l~~~~~~~~ 192 (342)
...++++|+||||+++ ++++++ +.+.+...+|+++ |+++|+|.. +++++++.+||||+++|+++|++.+
T Consensus 9 ~~~~vviD~ETTGl~~~~~~~~~~Iiei-gav~~~~~~g~i~~~f~~lv~P~~~~~i~~~~~~i~GIt~~~l~~~~~~~~ 87 (204)
T 1w0h_A 9 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 87 (204)
T ss_dssp SSEEEECCCEECCCTTCCTTSCCCEEEE-EEEEEETTTCSEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHH
T ss_pred cCEEEEEEEecCCcCCCCCCCCCcEEEE-EEEEEECCCCEEeeeeeeEECCCCCCccCHHHHHHhCCCHHHHhCCCCHHH
Confidence 4568999999999864 567776 5555432378875 999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhh-hcc-------ccCCCc--ceeeccccccccccC-CCCccHH
Q 019380 193 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPDH--MLRDTAKYRPLMKTN-LVSHSLK 261 (342)
Q Consensus 193 v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~-~l~-------~~~~~~--~~~Dt~~l~~~~~~~-~~~~~L~ 261 (342)
|+++|.+||.+... +....+|||||+.||+. ||+ +..|.. .++||..+++..++. ...++|+
T Consensus 88 v~~~~~~~l~~~~~-------~~~~~~lv~hn~~fD~~~~L~~~~~~~~~~~p~~~~~~~dt~~l~~~~~~~~~~~~~L~ 160 (204)
T 1w0h_A 88 VLKKVIDWMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLT 160 (204)
T ss_dssp HHHHHHHHHHHTTB-------TTTBCEEEEESSTTTTHHHHHHHHHHHTCCCCGGGSEEEEHHHHHHHHHTCCGGGCSHH
T ss_pred HHHHHHHHHHhcCC-------CCCCcEEEEEECcchHHHHHHHHHHHhCCCCcccccceEEHHHHHHHHhCCCCccchHH
Confidence 99999999943210 11345799999999996 997 334432 789999998877664 2358999
Q ss_pred HHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 262 YLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 262 ~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
.|++.| |++..+.+|+|++||++|++||.+++++...
T Consensus 161 ~l~~~~-gi~~~~~~H~Al~Da~~ta~l~~~l~~~~~~ 197 (204)
T 1w0h_A 161 IMLEKL-GMDYDGRPHCGLDDSKNIARIAVRMLQDGCE 197 (204)
T ss_dssp HHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHc-CCCCCCCccCcHHHHHHHHHHHHHHHHCCCe
Confidence 999988 9986655899999999999999999988643
No 5
>3mxm_B Three prime repair exonuclease 1; RNAse H-like fold, polyproline type II helix, hydrolase-DNA; HET: DNA; 1.75A {Mus musculus} SCOP: c.55.3.5 PDB: 3mxj_B 2ioc_B 3mxi_B* 3b6o_A* 2o4g_A* 3b6p_A* 2o4i_A 2oa8_A
Probab=99.93 E-value=1.1e-26 Score=206.70 Aligned_cols=164 Identities=15% Similarity=0.119 Sum_probs=133.6
Q ss_pred cCCCCcceeccccccccc--CCCcccccceEEeecCC--------C---------Ce--EEeeecCCCCCccccccccCC
Q 019380 120 TCRGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDED--------E---------NV--IFHTYVQPQLPVTNYRYEVTG 178 (342)
Q Consensus 120 ~~~~~~~v~~D~Ettg~~--~~~~~~il~~v~vv~~~--------~---------~~--~~~~lv~p~~~i~~~~~~i~G 178 (342)
..+...||+||+||||++ .++++|+ +.+.+.+.. | ++ .|+++|+|..+|++.++.+||
T Consensus 8 ~~~~~~~vv~D~ETTGl~~~~d~IiEI-gav~v~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~li~P~~~i~~~~~~i~G 86 (242)
T 3mxm_B 8 HGHMQTLIFLDLEATGLPSSRPEVTEL-CLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITG 86 (242)
T ss_dssp TCCCSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHHTSCCCCSSSCCCCCCCSCCEEEEEECCCSSCCCHHHHHHHC
T ss_pred ccccceEEEEEeecCCCCCCCCeeEEE-EEEEecCCcccccccccccccccccccchhheeEEEECCCCCCCHHHHHhcC
Confidence 334567999999999986 5788888 777775431 1 33 699999999999999999999
Q ss_pred CCHhhhcCC--CChH-HHHHHHHHHHhcCCCccccccCCCCC----eEEEeeCc-hhhhhhcc-------ccCC--Ccce
Q 019380 179 LTEEDIKNA--MPLK-EVKDKILEILNNGESTGRLMLDDGKA----RLLVGHGL-EHDLDSLR-------MNYP--DHML 241 (342)
Q Consensus 179 It~e~l~~~--~~~~-~v~~~~~~~l~~~~~~~~~~~~~~~~----~~lvgh~~-~~D~~~l~-------~~~~--~~~~ 241 (342)
||+++|.++ |+|. +|+++|.+|+ ++ .+|||||+ .||+.||+ +..+ ...+
T Consensus 87 It~~~l~~~g~p~~~~ev~~~~~~fl--------------~~~~~~~~lVaHNav~FD~~fL~~~~~r~g~~~~~~~~~~ 152 (242)
T 3mxm_B 87 LSKAELEVQGRQRFDDNLAILLRAFL--------------QRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFC 152 (242)
T ss_dssp CCHHHHHHTTCCCSCHHHHHHHHHHH--------------HTSCSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEE
T ss_pred CCHHHHHhcCCCchhHHHHHHHHHHH--------------hcCCCCCEEEEcCChHhhHHHHHHHHHHcCCCCCccCCeE
Confidence 999999998 9996 9999999999 55 89999995 99999998 2222 2368
Q ss_pred eeccccccccc--------cCCCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 242 RDTAKYRPLMK--------TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 242 ~Dt~~l~~~~~--------~~~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
+||+.+++.+. +...+++|+.|++.++|++.. ++|+|++||++|++||.++.+++..
T Consensus 153 iDtl~l~r~l~~~~~p~~~~~~~~~~L~~l~~~~~gi~~~-~~H~Al~Da~ata~l~~~~~~~~~~ 217 (242)
T 3mxm_B 153 VDSIAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPT-DSHTAEGDDLTLLSICQWKPQALLQ 217 (242)
T ss_dssp EEHHHHHHHHHHHHCC------CCCSHHHHHHHHHSSCCS-STTSHHHHHHHHHHHHTSSHHHHHH
T ss_pred eehHHHHHHHHhhcCccccCCCCCcCHHHHHHHHhCCCCC-CCcChHHHHHHHHHHHHHHHHHHHH
Confidence 99999887554 336789999999885599954 5999999999999999998877654
No 6
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=99.93 E-value=6.8e-27 Score=214.98 Aligned_cols=194 Identities=17% Similarity=0.263 Sum_probs=151.8
Q ss_pred CCcceecccccccccCC-----CcccccceEEeec-CCCCe----EEeeecCCCCC--ccccccccCCCCHhhhcCCCCh
Q 019380 123 GPKAVAMDCEMVGGGSN-----GTLDLCARVCLVD-EDENV----IFHTYVQPQLP--VTNYRYEVTGLTEEDIKNAMPL 190 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~~~-----~~~~il~~v~vv~-~~~~~----~~~~lv~p~~~--i~~~~~~i~GIt~e~l~~~~~~ 190 (342)
...+++||+||||++.. +++|+ +.+.+ | .+|++ .|+++|+|... |+++++.+||||+++|+++|+|
T Consensus 18 ~~~~vviD~ETTGl~~~~d~~~eIIEI-gaV~v-d~~~g~i~~~~~f~~lV~P~~~p~i~~~~~~ltGIt~e~v~~ap~~ 95 (308)
T 3cg7_A 18 FDTLLILDFETTSDAANQDYPCEVIQF-AIVAY-DVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTF 95 (308)
T ss_dssp CSEEEEEEEEECCBTTBCSCCCCEEEE-EEEEE-ETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBH
T ss_pred CCeEEEEEeecCCCCCCCCCCCCeEEE-EEEEE-EcCCCEEeeccceeeEECCCCCCCCCHHHHHHcCCCHHHHhcCCCH
Confidence 35689999999998753 66666 55544 4 36666 38999999984 9999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCc------hhhh-hhcc-------ccCCC--cceeeccccccccccC
Q 019380 191 KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL------EHDL-DSLR-------MNYPD--HMLRDTAKYRPLMKTN 254 (342)
Q Consensus 191 ~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~------~~D~-~~l~-------~~~~~--~~~~Dt~~l~~~~~~~ 254 (342)
.+|+++|.+|| ++.++||||+ .||+ .||+ +..|. .+++||+.+++..++.
T Consensus 96 ~evl~~f~~~l--------------~~~~lvahn~~lv~~g~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~ 161 (308)
T 3cg7_A 96 DVVYEQFQQWL--------------ITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDR 161 (308)
T ss_dssp HHHHHHHHHHH--------------HHHCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGGGSEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--------------HhCCcCCcceEEeccCcccHHHHHHHHHHHcCCCCchhhcceeeHHHHHHHHhcc
Confidence 99999999999 6777888888 9999 7886 33442 4689999998877664
Q ss_pred CC------CccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhhhhh--hcc------CCCCCCCCchhhH--
Q 019380 255 LV------SHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQVEE--IGN------QNTTGSFDSYKYK-- 318 (342)
Q Consensus 255 ~~------~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~-- 318 (342)
.. +++|.+|++.| |+++.+.+|+|++||++|++||.+++++...+.. ... ..+......|+++
T Consensus 162 ~~~~~~~~~~~L~~l~~~~-gi~~~~~~HrAl~DA~ata~l~~~l~~~~~~~~i~~~~~~s~~~~~~~~~~~~~w~~~~~ 240 (308)
T 3cg7_A 162 MGPKELSATTNIGKMNEYY-DLPTIGRAHDAMDDCLNIATILQRMINMGAKVTVNELLTCCASWRRQPLVYNKEWRSSFM 240 (308)
T ss_dssp HCCCCCCCCSHHHHHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTCCCCCCEEEESCCGGGSSCCCCCTTGGGCHH
T ss_pred ccccccccCcCHHHHHHHc-CCCCCCCCcCHHHHHHHHHHHHHHHHHcCCCCChHHHHhhcCCccccccccCcccccchH
Confidence 32 68999999888 9997665799999999999999999876543111 110 1121334588866
Q ss_pred ----HhhhCChhhhhhccC
Q 019380 319 ----ELEKMSPNELYQISK 333 (342)
Q Consensus 319 ----~~~~~~~~~~~~~~~ 333 (342)
.++++.|.+++++++
T Consensus 241 ~~~~~~~~~~p~~~~~~~~ 259 (308)
T 3cg7_A 241 DAGKIFERVLPLVVTTIRA 259 (308)
T ss_dssp HHHHHHHHHSSCEEEECCG
T ss_pred HHHHHHHHhcccceeeeec
Confidence 889999999998876
No 7
>2xri_A ERI1 exoribonuclease 3; hydrolase, metal binding; 2.15A {Homo sapiens}
Probab=99.93 E-value=2.3e-26 Score=202.65 Aligned_cols=157 Identities=17% Similarity=0.265 Sum_probs=128.1
Q ss_pred CcceecccccccccCC----CcccccceEEeecCCCCeE--EeeecCCCC--CccccccccCCCCHhhhcCCCChHHHHH
Q 019380 124 PKAVAMDCEMVGGGSN----GTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEVKD 195 (342)
Q Consensus 124 ~~~v~~D~Ettg~~~~----~~~~il~~v~vv~~~~~~~--~~~lv~p~~--~i~~~~~~i~GIt~e~l~~~~~~~~v~~ 195 (342)
..++++|+||||+++. +++|+ +++.+.+..++++ |+++|+|.. +|+++++++||||+++|+++|++.+|++
T Consensus 31 ~~~vviD~ETTGl~~~~d~~~IieI-gav~v~~~~~~i~~~f~~lV~P~~~~~i~~~~~~ltGIt~~~v~~a~~~~~v~~ 109 (224)
T 2xri_A 31 HYFLVLDFEATCDKPQIHPQEIIEF-PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLE 109 (224)
T ss_dssp SEEEEECCEECCCC-CCSSCCEEEE-EEEEEETTTCCEEEEEEEECCCSSSCSCCHHHHHHHCCCHHHHTTCCCHHHHHH
T ss_pred CeEEEEEEEcCCCCCCCCCcceEEE-EEEEEecCCcEEeeeeeeEECCCCCCcCCHHHHHHhCcCHHHHcCCCCHHHHHH
Confidence 5799999999998743 67777 6666654446775 999999997 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccCCCCCeEEEeeCc--------hhhhhh-cc-------ccCCC--cceeecc---ccccccccC
Q 019380 196 KILEILNNGESTGRLMLDDGKARLLVGHGL--------EHDLDS-LR-------MNYPD--HMLRDTA---KYRPLMKTN 254 (342)
Q Consensus 196 ~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~--------~~D~~~-l~-------~~~~~--~~~~Dt~---~l~~~~~~~ 254 (342)
+|.+|+ ++.+|||||+ .||+.| |+ +..|. ..++|+. .+++...|
T Consensus 110 ~f~~~l--------------~~~~lv~hn~~~~~~t~g~fD~~fll~~~~~~~g~~~p~~~~~~iD~~~~~~~~~~~~p- 174 (224)
T 2xri_A 110 RVDEWM--------------AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWP- 174 (224)
T ss_dssp HHHHHH--------------HHTTTTSTTSCEEEEESSSHHHHTHHHHHHHHHTCCCCGGGSCEEEHHHHHHHHHTSCC-
T ss_pred HHHHHH--------------hhcccccCCCceEEEEeChhhHHHHHHHHHHHhCCCCcccccceEeHHHHHHHHhccCC-
Confidence 999999 6778999999 999997 64 33442 3688944 34443333
Q ss_pred CCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 255 LVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 255 ~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
.++|..|++.| |++..+.+|+|++||++|++||.++++++..
T Consensus 175 --~~~L~~l~~~~-gi~~~~~~H~Al~DA~~ta~l~~~l~~~g~~ 216 (224)
T 2xri_A 175 --KNGLLDMNKGL-SLQHIGRPHSGIDDCKNIANIMKTLAYRGFI 216 (224)
T ss_dssp --TTTHHHHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred --CCCHHHHHHHc-CCCCCCCCcChHHHHHHHHHHHHHHHHcCCE
Confidence 48999999988 9886556899999999999999999987644
No 8
>1zbh_A 3'-5' exonuclease ERI1; histone mRNA 3'-END-specific recognition, structures of 3'- exonuclease and ITS RNA complex, hydrolase/RNA complex; HET: AMP; 3.00A {Homo sapiens}
Probab=99.92 E-value=1.6e-25 Score=205.47 Aligned_cols=167 Identities=16% Similarity=0.253 Sum_probs=134.3
Q ss_pred CCcceeccccccccc------CCCcccccceEEeecCCCCeE--EeeecCCCC--CccccccccCCCCHhhhcCCCChHH
Q 019380 123 GPKAVAMDCEMVGGG------SNGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 192 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~------~~~~~~il~~v~vv~~~~~~~--~~~lv~p~~--~i~~~~~~i~GIt~e~l~~~~~~~~ 192 (342)
...+++||+||||++ .++++++ +.+.+...+|+++ |+++|+|.. +|+++++.+||||+++|+++|+|.+
T Consensus 77 ~~~~vviD~ETTGl~~~~~~~~~~IIeI-gaV~v~~~~g~i~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~v~~ap~~~e 155 (299)
T 1zbh_A 77 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 155 (299)
T ss_dssp CSEEEEECCEECCCTTCCTTCCCCEEEE-EEEEEETTTCCEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHH
T ss_pred CceEEEEEeecccCCCCCCCCCCceEEE-EEEEEECCCCeEeeeeeeeecCCCCCCCCHHHHHHhCCCHHHHhcCCCHHH
Confidence 467899999999984 4567777 6666644467775 999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhh-hcc-------ccCCC--cceeeccccccccccCC-CCccHH
Q 019380 193 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPD--HMLRDTAKYRPLMKTNL-VSHSLK 261 (342)
Q Consensus 193 v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~-~l~-------~~~~~--~~~~Dt~~l~~~~~~~~-~~~~L~ 261 (342)
|+++|.+||..... +..+.++||||+.||+. ||+ +..|. ..++|+..+++..++.. ..++|.
T Consensus 156 vl~~f~~~l~~~~~-------~~~~~~lVahn~~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~L~ 228 (299)
T 1zbh_A 156 VLKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLT 228 (299)
T ss_dssp HHHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHHHHHHTCCGGGCSHH
T ss_pred HHHHHHHHHhhccc-------CCCCcEEEEEeCHHHHHHHHHHHHHHcCCCCCcccchHHHHHHHHHHHhCCCCCCccHH
Confidence 99999999943210 11236999999999999 997 23342 36899988776654422 248999
Q ss_pred HHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhh
Q 019380 262 YLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 298 (342)
Q Consensus 262 ~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~ 298 (342)
.|+++| |++..+.+|+|++||++|++||.+++++..
T Consensus 229 ~l~~~~-gi~~~g~~H~Al~DA~ata~l~~~l~~~~~ 264 (299)
T 1zbh_A 229 IMLEKL-GMDYDGRPNCGLDDSKNIARIAVRMLQDGC 264 (299)
T ss_dssp HHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHc-CCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Confidence 999988 998665589999999999999999998753
No 9
>3u3y_B Three prime repair exonuclease 1; RNAse H fold, 3' exonuclease, homodimer, hydrolase-DNA compl; HET: BU1; 2.28A {Mus musculus} PDB: 3u6f_B*
Probab=99.92 E-value=1.4e-25 Score=204.70 Aligned_cols=167 Identities=13% Similarity=0.107 Sum_probs=131.8
Q ss_pred CCCCcceeccccccccc--CCCcccccceEEeecCC--------C---------C--eEEeeecCCCCCccccccccCCC
Q 019380 121 CRGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDED--------E---------N--VIFHTYVQPQLPVTNYRYEVTGL 179 (342)
Q Consensus 121 ~~~~~~v~~D~Ettg~~--~~~~~~il~~v~vv~~~--------~---------~--~~~~~lv~p~~~i~~~~~~i~GI 179 (342)
.....||+||+||||++ .++++|+ +.+.+.+.. | + ..|+++|+|..+|++.++++|||
T Consensus 9 ~~~~tfVv~DlETTGL~~~~d~IIEI-gaV~v~~~~l~~~~~~~g~~~~~~~~~~v~~~~~~lI~P~~~I~~~a~~IhGI 87 (314)
T 3u3y_B 9 GHMQTLIFLDLEATGLPSSRPEVTEL-CLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGL 87 (314)
T ss_dssp CCCSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHHC--CCCSSSCCCCCCCSSCEEEEEECBCSSCCCHHHHHHHSC
T ss_pred cccCCEEEEEEECCCCCCCCCeEEEE-EEEEEECCccccccccccccccccccceeeeeEEEEECCCCCCCHHHHHhcCC
Confidence 34567999999999986 6788888 777765331 0 2 26899999999999999999999
Q ss_pred CHhhhcCC--CCh-HHHHHHHHHHHhcCCCccccccCCCCCeEEEeeC-chhhhhhcc-------ccCC--Ccceeeccc
Q 019380 180 TEEDIKNA--MPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLR-------MNYP--DHMLRDTAK 246 (342)
Q Consensus 180 t~e~l~~~--~~~-~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~-~~~D~~~l~-------~~~~--~~~~~Dt~~ 246 (342)
|+++|+++ |+| ++|+++|.+|+... +...+||||| +.||+.||+ +..+ ...++||+.
T Consensus 88 T~e~l~~aG~P~f~~ev~~~l~~fL~~~----------~~~~vLVAHNga~FD~~FL~~el~r~Gl~~~~~~~~~iDTL~ 157 (314)
T 3u3y_B 88 SKAELEVQGRQRFDDNLAILLRAFLQRQ----------PQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIA 157 (314)
T ss_dssp CHHHHHHTTCCBSCHHHHHHHHHHHHTS----------CSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEHHH
T ss_pred CHHHHHhCCCCCcHHHHHHHHHHHHhcC----------CCCcEEEEeCcHHHHHHHHHHHHHHcCCCCCCCCceEEeHHH
Confidence 99999999 899 69999999999210 0238999999 999999998 2222 245789987
Q ss_pred ----cccccccC----CCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 247 ----YRPLMKTN----LVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 247 ----l~~~~~~~----~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
+.+..+|. ..+++|++|+++|+|++. .++|+|++||++|++||.++.+++.+
T Consensus 158 l~r~L~r~~~P~~~~~~~~~~L~~L~~~l~gi~~-~~aHrAl~DA~ata~lf~~l~~~~l~ 217 (314)
T 3u3y_B 158 ALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAP-TDSHTAEGHVLTLLSICQWKPQALLQ 217 (314)
T ss_dssp HHHHHHTTC-------CCCCSHHHHHHHHHSSCC-SCSSSHHHHHHHHHHHHHSSHHHHHH
T ss_pred HHHHHHHHhCccccccCCCCCHHHHHHHhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44455554 378999999999449994 46999999999999999988877644
No 10
>1y97_A Three prime repair exonuclease 2; TREX2, hydrolase; 2.50A {Homo sapiens} SCOP: c.55.3.5
Probab=99.91 E-value=7.2e-25 Score=194.84 Aligned_cols=166 Identities=19% Similarity=0.183 Sum_probs=128.5
Q ss_pred CCCcceeccccccccc--CCCcccccceEEeecC--------------CCCe--EEeeecCCCCCccccccccCCCCHhh
Q 019380 122 RGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDE--------------DENV--IFHTYVQPQLPVTNYRYEVTGLTEED 183 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~--~~~~~~il~~v~vv~~--------------~~~~--~~~~lv~p~~~i~~~~~~i~GIt~e~ 183 (342)
....++++|+||||++ .++++++ +.+.+.+. .+++ .|+++|+|..+|+++++.+||||+++
T Consensus 8 ~~~~~v~iD~ETTGl~~~~~~IieI-g~v~~~~~~~~~~~~~~~~~~~~~~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~ 86 (238)
T 1y97_A 8 RAETFVFLDLEATGLPSVEPEIAEL-SLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPERPFTAKASEITGLSSEG 86 (238)
T ss_dssp CCSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHTSCBC---CCCBCCSSCEEEEEECCCSSCCCHHHHHHHCCCHHH
T ss_pred ccCeEEEEEeeCCCcCCCCCcEEEE-EEEEecccccccccccccccccccccceeeEEEECCCCcCCHHHHHHhCCCHHH
Confidence 3457999999999986 4667777 66666432 1244 49999999999999999999999999
Q ss_pred h--cCCCChH-HHHHHHHHHHhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc-------ccCCC-cceeecccccccc
Q 019380 184 I--KNAMPLK-EVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-------MNYPD-HMLRDTAKYRPLM 251 (342)
Q Consensus 184 l--~~~~~~~-~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-------~~~~~-~~~~Dt~~l~~~~ 251 (342)
| .++|+|. +|++.|.+|+... .++.+|||||+ .||+.||+ +.++. ..++||+.+++.+
T Consensus 87 l~~~~~p~f~~~v~~~l~~fl~~~----------~~~~~lVahN~~~FD~~fL~~~~~~~g~~~~~~~~~iDt~~l~~~~ 156 (238)
T 1y97_A 87 LARCRKAGFDGAVVRTLQAFLSRQ----------AGPICLVAHNGFDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGL 156 (238)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHTTS----------CSSEEEEETTTTTTHHHHHHHHHHHHTCCCCTTCEEEEHHHHHHHH
T ss_pred HhhcCCCccHHHHHHHHHHHHHhC----------CCCCEEEecCchhhhHHHHHHHHHHcCCCCCCCCEEEEHHHHHHHH
Confidence 9 5789994 9999999999210 02389999999 99999998 22332 5689999998887
Q ss_pred c---------cCCCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 252 K---------TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 252 ~---------~~~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
. |...+++|+.|++.++|++. .++|+|++||++|++||.++.++..+
T Consensus 157 ~~~~~p~~~~p~~~~~~L~~l~~~~~gi~~-~~~H~Al~Da~~ta~l~~~l~~~~~~ 212 (238)
T 1y97_A 157 DRAHSHGTRARGRQGYSLGSLFHRYFRAEP-SAAHSAEGDVHTLLLIFLHRAAELLA 212 (238)
T ss_dssp HHHC----------CCSHHHHHHHHHSSCC-C---CHHHHHHHHHHHHHHTHHHHHH
T ss_pred HhccCccccCCCCCCCCHHHHHHHHhCCCC-ccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 6 55578999999996449884 45999999999999999999877654
No 11
>1zbu_A ERI-1 homolog, 3'-5' exonuclease ERI1; hydrolase; HET: AMP; 3.00A {Homo sapiens}
Probab=99.91 E-value=3.6e-25 Score=206.23 Aligned_cols=167 Identities=17% Similarity=0.263 Sum_probs=134.8
Q ss_pred CCcceeccccccccc------CCCcccccceEEeecCCCCeE--EeeecCCCC--CccccccccCCCCHhhhcCCCChHH
Q 019380 123 GPKAVAMDCEMVGGG------SNGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 192 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~------~~~~~~il~~v~vv~~~~~~~--~~~lv~p~~--~i~~~~~~i~GIt~e~l~~~~~~~~ 192 (342)
...+|+||+||||++ .+.++++ +.+.+...+|+++ |+++|+|.. +|+++++.+||||+++|+++|+|.+
T Consensus 127 ~~~~vviD~ETTGl~~~~~~~~deIIEI-gaV~vd~~~g~i~~~f~~lVkP~~~~~I~~~~t~ihGIT~e~v~~ap~~~e 205 (349)
T 1zbu_A 127 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 205 (349)
T ss_dssp CSEEEECCCEECCCTTCCTTCCCCEEEC-CEEEEETTTTEEEEEECCBEECSSSCSCCHHHHHHHCCCHHHHHTSEEHHH
T ss_pred CCeEEEEEEecCCCCCcCCCCCCeEEEE-EEEEEECCCceEeEEEEEEECCCCCCCCCHHHHHHhCCCHHHHhCCCCHHH
Confidence 467899999999984 4578888 7777754467775 999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhh-hcc-------ccCCC--cceeeccccccccccCC-CCccHH
Q 019380 193 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPD--HMLRDTAKYRPLMKTNL-VSHSLK 261 (342)
Q Consensus 193 v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~-~l~-------~~~~~--~~~~Dt~~l~~~~~~~~-~~~~L~ 261 (342)
|+.+|.+||..... +....+|||||+.||+. ||+ +..|. ..++|+..+++..++.. ..++|.
T Consensus 206 Vl~~f~~~l~~~~~-------~~~~~~lVaHNa~FD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~L~ 278 (349)
T 1zbu_A 206 VLKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLT 278 (349)
T ss_dssp HHHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHHHHHHTCCGGGGSHH
T ss_pred HHHHHHHHHhcccc-------cCCCcEEEEECcHhhHHHHHHHHHHHhCCCCccccchHHHHHHHHHHHhcCCCCCCCHH
Confidence 99999999943210 11226999999999999 997 23342 36899988876654422 248999
Q ss_pred HHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhh
Q 019380 262 YLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 298 (342)
Q Consensus 262 ~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~ 298 (342)
.|+++| |+++.+.+|+|++||++|++||.+++++..
T Consensus 279 ~l~~~~-gi~~~g~~HrAl~DA~ata~ll~~ll~~~~ 314 (349)
T 1zbu_A 279 IMLEKL-GMDYDGRPHCGLDDSKNIARIAVRMLQDGC 314 (349)
T ss_dssp HHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHc-CCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 999988 998765589999999999999999998753
No 12
>2f96_A Ribonuclease T; RNAse, RNT, RNAse T, tRNA hydrolase, SAD, PS protein structure initiative, midwest center for structural genomics; 2.09A {Pseudomonas aeruginosa} SCOP: c.55.3.5
Probab=99.91 E-value=4.6e-25 Score=194.32 Aligned_cols=169 Identities=20% Similarity=0.238 Sum_probs=133.2
Q ss_pred CCCcceecccccccccC--CCcccccceEEeec-CCCCe----EEeeecCC--CCCccccccccCCCCHhh-hcCCCChH
Q 019380 122 RGPKAVAMDCEMVGGGS--NGTLDLCARVCLVD-EDENV----IFHTYVQP--QLPVTNYRYEVTGLTEED-IKNAMPLK 191 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~~--~~~~~il~~v~vv~-~~~~~----~~~~lv~p--~~~i~~~~~~i~GIt~e~-l~~~~~~~ 191 (342)
....++++|+||||+++ +.++++ +.+.+.. .+|++ .|+++|+| ..+|+++++++||||+++ +++++++.
T Consensus 27 ~~~~~vviD~ETTGl~~~~~~IieI-g~v~~~~~~~g~i~~~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~~v~~~~~~~ 105 (224)
T 2f96_A 27 RGYLPVVVDVETGGFNSATDALLEI-AATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQEE 105 (224)
T ss_dssp TTEEEEEEEEEESSSCTTTBCEEEE-EEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHTCCTTCTTCCCBCHH
T ss_pred cCCcEEEEEeeCCCCCCCCCeeEEE-EEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHH
Confidence 34468999999999874 467777 6666642 25664 48999999 578999999999999975 89999999
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhccc-----cC---C--CcceeeccccccccccCCCCccHH
Q 019380 192 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM-----NY---P--DHMLRDTAKYRPLMKTNLVSHSLK 261 (342)
Q Consensus 192 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~-----~~---~--~~~~~Dt~~l~~~~~~~~~~~~L~ 261 (342)
+|+.+|.+||.+.- ...+.++.+|||||+.||+.||+. .. | ...++||+.+++.+++ +++|.
T Consensus 106 ~v~~~~~~~l~~~~-----~~~~~~~~~lV~hn~~FD~~fL~~~~~~~g~~~~p~~~~~~iDt~~l~~~~~~---~~~L~ 177 (224)
T 2f96_A 106 AALTEIFRGIRKAL-----KANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLAGLAYG---QTVLA 177 (224)
T ss_dssp HHHHHHHHHHHHHH-----HHTTCSEEEEEETTHHHHHHHHHHHHHHHTCCCCCEEEEEEEEHHHHHHHHHS---CCSHH
T ss_pred HHHHHHHHHHHHHh-----hhcccCCCEEEEeChhhhHHHHHHHHHHcCCCcCCccccceeeHHHHHHHHcC---CCCHH
Confidence 99999999982100 000013689999999999999982 22 2 2468999999988775 46899
Q ss_pred HHHHHHhCCcCCC-CCCCcHHHHHHHHHHHHHHHhhhhhh
Q 019380 262 YLTRTYLGYDIQS-GVHDPYEDCVSVMRLYKRFRRQDHQV 300 (342)
Q Consensus 262 ~l~~~~~~~~~~~-~~H~A~~Da~~t~~l~~~~~~~~~~~ 300 (342)
.|++.| |+++.. .+|+|++||++|++||.+++++..++
T Consensus 178 ~l~~~~-gi~~~~~~~H~Al~Da~~ta~l~~~l~~~~~~~ 216 (224)
T 2f96_A 178 KACQAA-GMEFDNREAHSARYDTEKTAELFCGIVNRWKEM 216 (224)
T ss_dssp HHHHHT-TCCCCTTSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc-CCCcCCCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 999988 998653 59999999999999999999987664
No 13
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.90 E-value=9.5e-25 Score=185.85 Aligned_cols=153 Identities=18% Similarity=0.215 Sum_probs=115.2
Q ss_pred CCcceecccccccccC--CCcccccceEEeecCCCCeE---EeeecCCCCCccccc-------cccCCCCHhhhcCCCCh
Q 019380 123 GPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPVTNYR-------YEVTGLTEEDIKNAMPL 190 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~~--~~~~~il~~v~vv~~~~~~~---~~~lv~p~~~i~~~~-------~~i~GIt~e~l~~~~~~ 190 (342)
..+++++|+||||+++ ++++++ +.+ +++.++.++ |+++|+|..++++.. +.+||||+++++++|++
T Consensus 4 ~~~~v~iD~ETTGl~~~~~~IieI-g~v-~~~~~~~~~~~~~~~lv~P~~~i~~~i~~~~~~~~~itGIt~~~l~~~~~~ 81 (180)
T 2igi_A 4 ENNLIWIDLEMTGLDPERDRIIEI-ATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGD 81 (180)
T ss_dssp GGCEEEEEEEESSSCTTTCCEEEE-EEE-EECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCH
T ss_pred CCcEEEEEeeCCCCCCCCCceEEE-EEE-EEcCCCcEecCCcceEECCCHHHhhcCCHHHHHHHHHcCCCHHHHhcCCCH
Confidence 3469999999999874 567777 666 556677664 999999998776544 56699999999999999
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhccccCC------Ccceee--cc-ccccccccCCCCccHH
Q 019380 191 KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP------DHMLRD--TA-KYRPLMKTNLVSHSLK 261 (342)
Q Consensus 191 ~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~------~~~~~D--t~-~l~~~~~~~~~~~~L~ 261 (342)
.+|+++|.+|+.... +++..+|||||+.||+.||+..++ ..+++| |+ .+++.+.|..
T Consensus 82 ~~v~~~~~~~l~~~~--------~~~~~~lv~hn~~fD~~fL~~~~~~~~~~~~~~~~d~~tl~~l~~~~~p~~------ 147 (180)
T 2igi_A 82 REAELATLEFLKQWV--------PAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEI------ 147 (180)
T ss_dssp HHHHHHHHHHHTTTS--------CTTTSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEETHHHHHHHHHHCGGG------
T ss_pred HHHHHHHHHHHHHhC--------CCCCceEEecCHHHHHHHHHHHHHHhccCCCcceeeHHHHHHHHHHhChHh------
Confidence 999999999992210 012479999999999999994432 144678 55 2555544431
Q ss_pred HHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhh
Q 019380 262 YLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 262 ~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~ 297 (342)
. . |+. ..++|+|++||++|++||.++++..
T Consensus 148 --~--~-~i~-~~~~H~Al~Da~ata~l~~~~~~~~ 177 (180)
T 2igi_A 148 --L--D-GFT-KQGTHQAMDDIRESVAELAYYREHF 177 (180)
T ss_dssp --G--G-GSC-CCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred --h--h-CCC-CcCCcCcHHHHHHHHHHHHHHHHHh
Confidence 0 1 554 4459999999999999999998874
No 14
>3v9w_A Ribonuclease T; DEDD nucleases family, EXO-nucleases, hydrolase-DNA complex; HET: DNA; 1.70A {Escherichia coli} PDB: 3ngy_A 3v9u_A* 3ngz_A* 3va3_A* 3v9z_A* 3nh0_A 3nh2_A 3nh1_A* 3v9s_A* 3v9x_A* 3va0_A* 2is3_A
Probab=99.89 E-value=9.7e-24 Score=187.20 Aligned_cols=168 Identities=21% Similarity=0.254 Sum_probs=133.6
Q ss_pred CCCcceeccccccccc--CCCcccccceEEee-cCCCCe----EEeeecCC--CCCccccccccCCCCHh-hhcCCCChH
Q 019380 122 RGPKAVAMDCEMVGGG--SNGTLDLCARVCLV-DEDENV----IFHTYVQP--QLPVTNYRYEVTGLTEE-DIKNAMPLK 191 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~--~~~~~~il~~v~vv-~~~~~~----~~~~lv~p--~~~i~~~~~~i~GIt~e-~l~~~~~~~ 191 (342)
....++++|+||||++ .++++++ +.+.+. +.+|.+ .|+.+|+| ..+++++++++||||++ +++++|++.
T Consensus 35 ~~~~~vviD~ETTGl~~~~~~IieI-gav~~~~~~~g~i~~~~~f~~~v~P~~~~~i~~~~~~i~GIt~e~~v~~~~~~~ 113 (235)
T 3v9w_A 35 RGFYPVVIDVETAGFNAKTDALLEI-AAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSGY 113 (235)
T ss_dssp TTEEEEEEEEEESSSCTTTBCEEEE-EEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHCCCTTCGGGCCBCHH
T ss_pred cCCcEEEEEEeCCCCCCCCCeEEEE-EEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHH
Confidence 3456899999999986 4556666 666553 235664 48999999 57899999999999999 999999999
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhccc-----cC---CC--cceeeccccccccccCCCCccHH
Q 019380 192 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM-----NY---PD--HMLRDTAKYRPLMKTNLVSHSLK 261 (342)
Q Consensus 192 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~-----~~---~~--~~~~Dt~~l~~~~~~~~~~~~L~ 261 (342)
+++++|.+|+.+.-. ..+.++.++||||+.||+.||+. .. |. ..++||+.+++.++|. ++|+
T Consensus 114 ~vl~~~~~~l~~~~~-----~~~~~~~~lVahN~~fD~~~L~~~~~~~g~~~~p~~~~~~~Dt~~la~~~~p~---~~L~ 185 (235)
T 3v9w_A 114 EALHEIFKVVRKGIK-----ASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQ---TVLS 185 (235)
T ss_dssp HHHHHHHHHHHHHHT-----TTTCCEEEEEETTTHHHHHHHHHHHHHTTCCCCCEEEEEEEEHHHHHHHHHSC---CSHH
T ss_pred HHHHHHHHHHHHHhh-----hccCCCcEEEEeChHHHHHHHHHHHHHcCCCCCCCCCCcEEEhHHHHHHHhCC---CCHH
Confidence 999999999932100 00014789999999999999972 22 22 4589999999988763 7999
Q ss_pred HHHHHHhCCcCCC-CCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 262 YLTRTYLGYDIQS-GVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 262 ~l~~~~~~~~~~~-~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
.|++.| |+++.. .+|+|++||++|++||.+++++..+
T Consensus 186 ~l~~~~-gi~~~~~~~H~Al~DA~~ta~l~~~l~~~l~~ 223 (235)
T 3v9w_A 186 KACQTA-GMDFDSTQAHSALYDTERTAVLFCEIVNRWKR 223 (235)
T ss_dssp HHHHHH-TCCCCTTTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCCCCCCCCcChHHHHHHHHHHHHHHHHHHHh
Confidence 999999 998754 5999999999999999999998765
No 15
>3tr8_A Oligoribonuclease; transcription, hydrolase; 2.50A {Coxiella burnetii}
Probab=99.88 E-value=4.9e-24 Score=181.37 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=118.1
Q ss_pred CCCcceeccccccccc--CCCcccccceEEeecCCCCeE---EeeecCCCC----Ccccc---ccccCCCCHhhhcCCCC
Q 019380 122 RGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDEDENVI---FHTYVQPQL----PVTNY---RYEVTGLTEEDIKNAMP 189 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~--~~~~~~il~~v~vv~~~~~~~---~~~lv~p~~----~i~~~---~~~i~GIt~e~l~~~~~ 189 (342)
...++|++|+||||++ .+.++|+ +.+ +++.++.++ +..+|+|+. .+++. ...+||||+++++++|+
T Consensus 7 ~~~~~v~~D~ETTGL~p~~d~IiEI-gaV-~~d~~~~i~~~~~~~~i~~p~~~l~~~~~~~~~ih~ltGIt~~~l~~~p~ 84 (186)
T 3tr8_A 7 SDDNLIWLDLEMTGLDPERDRIIEI-ATI-VTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHTASGLLERVKNSSVD 84 (186)
T ss_dssp CTTCEEEEEEEESSSCTTTCCEEEE-EEE-EECTTCCEEEECCCEECCCCHHHHTTSCHHHHHHHHHTSHHHHHHTCCCC
T ss_pred CCCcEEEEEEECCCCCCCCCceEEE-EEE-EEcCCeEEeeeeEEEEEeCCccccccCCcccHHHHhccCCCHHHHhcCCC
Confidence 4568999999999987 5677777 777 766666654 455686443 12333 44567999999999999
Q ss_pred hHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhccccCC------Ccceee--ccc-cccccccCCCCccH
Q 019380 190 LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP------DHMLRD--TAK-YRPLMKTNLVSHSL 260 (342)
Q Consensus 190 ~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~------~~~~~D--t~~-l~~~~~~~~~~~~L 260 (342)
+++|+++|++||..... .++.+|||||+.||+.||+..++ ..+++| |+. |++.++|...
T Consensus 85 ~~ev~~~~l~fl~~~~~--------~~~~~lvghn~~FD~~FL~~~~~~~~~~~~~~~iDvsTl~elar~~~P~~~---- 152 (186)
T 3tr8_A 85 EVEAETLTLAFLEKYVS--------AGKSPLCGNSVCQDRRFLSRYMPRLNQFFHYRHLDVTTLKILAQRWAPQIA---- 152 (186)
T ss_dssp HHHHHHHHHHHHTTTSC--------TTCSCEEESSTHHHHHHHHHHCHHHHHHSCSCEEEHHHHHHHHHHHCHHHH----
T ss_pred HHHHHHHHHHHHHHhcc--------CCCcEEEEEcHHHhHHHHHHHHHHcCCCCCCcEEeHHHHHHHHHHHCcccc----
Confidence 99999999999943221 25689999999999999994332 256899 886 8888887521
Q ss_pred HHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhh
Q 019380 261 KYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 261 ~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~ 297 (342)
. |++ ..++|+|++||++|.++++.+++..
T Consensus 153 -~------~~~-~~~~HrAl~Da~ati~~l~~y~~~~ 181 (186)
T 3tr8_A 153 -A------AHI-KESQHLALQDIRDSIEELRYYRAHL 181 (186)
T ss_dssp -T------TSC-CCCCSCHHHHHHHHHHHHHHHHHHT
T ss_pred -c------cCC-CCCCcChHHHHHHHHHHHHHHHHHh
Confidence 1 556 4569999999999999999999875
No 16
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, hydrolase; 2.30A {Xanthomonas campestris PV}
Probab=99.88 E-value=2.8e-23 Score=178.86 Aligned_cols=148 Identities=16% Similarity=0.290 Sum_probs=112.4
Q ss_pred CCCcceecccccccccC--CCcccccceEEeecCCCCeE---EeeecCCCCCc----cccccc---cCCCCHhhhcCCCC
Q 019380 122 RGPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPV----TNYRYE---VTGLTEEDIKNAMP 189 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~~--~~~~~il~~v~vv~~~~~~~---~~~lv~p~~~i----~~~~~~---i~GIt~e~l~~~~~ 189 (342)
...+++++|+||||+++ +.++++ +.+. .+..+.++ |+++|+|..++ +++.+. +||||+++++++|+
T Consensus 7 ~~~~~vviD~ETTGl~p~~d~IieI-gav~-~~~~~~~~~~~~~~~v~p~~~i~~~~~~~~~~~~~itGIt~~~l~~~p~ 84 (194)
T 2gbz_A 7 GNDRLIWIDLEMTGLDTDRDSIIEI-ATIV-TDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVT 84 (194)
T ss_dssp -CCEEEEEEEEESCSCTTTCCEEEE-EEEE-EETTCCEEEECCCEECCCCHHHHHTSCSHHHHHHHHHTHHHHHHHCCCC
T ss_pred CCCCEEEEEeECCCCCCCCCccEEE-EEEE-EcCCcceeccCceEEEeCCHHHhhccchHHHHHHHhhCCCHHHHhcCCC
Confidence 34579999999999874 566766 6555 45554333 88999999776 444444 49999999999999
Q ss_pred hHHHHHHHHHHHhcCCCccccccCCCCCeE------EEeeCchhhhhhccccCCC------cceeeccccccccccCCCC
Q 019380 190 LKEVKDKILEILNNGESTGRLMLDDGKARL------LVGHGLEHDLDSLRMNYPD------HMLRDTAKYRPLMKTNLVS 257 (342)
Q Consensus 190 ~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~------lvgh~~~~D~~~l~~~~~~------~~~~Dt~~l~~~~~~~~~~ 257 (342)
+.+|+++|.+|| ++.+ |||||+.||+.||+..++. .+.+|+.
T Consensus 85 ~~ev~~~~~~~l--------------~~~~~~~~~~lvghn~~FD~~fL~~~~~~~~~~~~~~~~d~~------------ 138 (194)
T 2gbz_A 85 HAQAEAQTVAFL--------------GEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVS------------ 138 (194)
T ss_dssp HHHHHHHHHHHH--------------TTTCCTTSSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEEHH------------
T ss_pred HHHHHHHHHHHH--------------HHhCCCCCceEEecCHHHhHHHHHHHHHHhcccCCCccccHH------------
Confidence 999999999999 5555 9999999999999955432 2334433
Q ss_pred ccHHHHHHHHh-----CCcCCCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 258 HSLKYLTRTYL-----GYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 258 ~~L~~l~~~~~-----~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
+|..|++.++ +++ ..++|+|++||++|++||.++++++..
T Consensus 139 -~l~~l~~~~~p~~~~~i~-~~~~H~Al~Da~ata~ll~~~~~~~~~ 183 (194)
T 2gbz_A 139 -TIKELARRWAPAVASGFA-KSSAHTALSDVRDSIDELRHYRQFMGT 183 (194)
T ss_dssp -HHHHHHHHHCGGGGTTCC-CCSCCSHHHHHHHHHHHHHHHHTTSHH
T ss_pred -HHHHHHHHhCHHHHhCCC-CCCCcccHHHHHHHHHHHHHHHHHhcc
Confidence 4556666662 243 345999999999999999999998754
No 17
>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, produc structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=99.87 E-value=7.7e-23 Score=197.57 Aligned_cols=164 Identities=18% Similarity=0.195 Sum_probs=127.5
Q ss_pred CCcceecccccccccC--CCcccccceEEeecCCCCeE---EeeecCCCCCc--cccccccCCCCHhhhcCCCCh-HHHH
Q 019380 123 GPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPV--TNYRYEVTGLTEEDIKNAMPL-KEVK 194 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~~--~~~~~il~~v~vv~~~~~~~---~~~lv~p~~~i--~~~~~~i~GIt~e~l~~~~~~-~~v~ 194 (342)
...++++|+||||+++ +.++++ +.+.+ +.+|.++ |+++|+|..++ .+.++.+||||+++|.+++.+ .+|+
T Consensus 8 ~~~~vv~DlETTGl~p~~d~IIEI-gaV~v-d~~g~ii~~~f~~lVkP~~~ilp~p~a~~IhGIT~e~l~~ap~~~~evl 85 (482)
T 2qxf_A 8 QSTFLFHDYETFGTHPALDRPAQF-AAIRT-DSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFA 85 (482)
T ss_dssp CCEEEEEEEEESSSCTTTSCEEEE-EEEEE-CTTSCBCSCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCBCHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCeEEEE-EEEEE-ECCCeEEeeeeEEEECCCCCCCCCHHHHHHhCCCHHHHhcCCCCHHHHH
Confidence 3469999999999873 567777 55544 5567765 99999999887 567889999999999987755 9999
Q ss_pred HHHHHHHhcCCCccccccCCCCCeEEEeeC-chhhhhhcccc-----C---C--C---cceeecccccccccc-------
Q 019380 195 DKILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLRMN-----Y---P--D---HMLRDTAKYRPLMKT------- 253 (342)
Q Consensus 195 ~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~-~~~D~~~l~~~-----~---~--~---~~~~Dt~~l~~~~~~------- 253 (342)
.+|.+|+ +..+.+||||| +.||+.||+.. . + + ...+||..+++..++
T Consensus 86 ~~f~~~l------------~~~~~~lVaHNs~~FD~~fL~~~~~r~g~~~~~~~w~~~~~~iDtl~l~r~~~~~~~~~~~ 153 (482)
T 2qxf_A 86 ARIHSLF------------TVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIN 153 (482)
T ss_dssp HHHHHHH------------TSTTEEEEESSTTTTHHHHHHHHHHHTTSCSSGGGTGGGCEEEEHHHHHHHHHHHCCTTSC
T ss_pred HHHHHHH------------cCCCCEEEEECCHHHHHHHHHHHHHHhCCCccccccccCCceeeHHHHHHHHHHhCccccc
Confidence 9999999 11289999999 99999999821 1 1 1 457899887776542
Q ss_pred ------CCCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhhhhhh
Q 019380 254 ------NLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQVEE 302 (342)
Q Consensus 254 ------~~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~~~~~ 302 (342)
+..+++|+.|+..+ |++. .++|+|++||++|++||.++.++...+.+
T Consensus 154 wP~~~~~~~s~kL~~L~~~~-Gi~~-~~aHrAL~DA~aTa~l~~~l~~~~p~l~~ 206 (482)
T 2qxf_A 154 WPENDDGLPSFRLEHLTKAN-GIEH-SNAHDAMADVYATIAMAKLVKTRQPRLFD 206 (482)
T ss_dssp CCBCTTSSBCCCHHHHHHHT-TCCC-C---CTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CcccccCCCCCCHHHHHHHc-CCCC-CCCCCHHHHHHHHHHHHHHHHHhChhhhH
Confidence 34578999999988 9884 45899999999999999999877654443
No 18
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.70 E-value=5e-18 Score=136.91 Aligned_cols=88 Identities=22% Similarity=0.336 Sum_probs=78.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc---CCCcccCCCCCcccCCccccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLC 84 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~C 84 (342)
..|+++|+|+.|++.|.++..|..|+++ |+++++ .|..|++.|.+...|..|+ ++..++ .|+.|
T Consensus 17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~----------~C~~C 84 (133)
T 2lt7_A 17 VDGRVYYICIVCKRSYVCLTSLRRHFNI--HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRY----------QCLAC 84 (133)
T ss_dssp ETTEEEEEETTTCCEESCHHHHHHHHHH--HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCE----------EESSS
T ss_pred cCCCcCeECCCCCCCcCCHHHHHHHHHH--cCCCCCeeCCccCeecccccchhhhccccCCCccc----------cCCCC
Confidence 4689999999999999999999999999 998888 9999999999999999998 333332 46889
Q ss_pred ccccCChhhHHHHHhhcCCCCCCC
Q 019380 85 MNIFDSPSSLIKHKEACSLSAPVP 108 (342)
Q Consensus 85 ~k~F~~~~~L~~H~~~h~~~~~~~ 108 (342)
|++|..++.|..|+++|++++|..
T Consensus 85 ~k~F~~~~~L~~H~~~hh~~~p~~ 108 (133)
T 2lt7_A 85 GKSFINYQFMSSHIKSVHSQDPSG 108 (133)
T ss_dssp CCEESSHHHHHHHHHHHTCCCTTS
T ss_pred CCCcCCHHHHHHHhHHhcCCCCCC
Confidence 999999999999999999887644
No 19
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.69 E-value=8.1e-18 Score=143.67 Aligned_cols=106 Identities=28% Similarity=0.482 Sum_probs=69.2
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCc---
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG--- 80 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~--- 80 (342)
+++++|.|+.|++.|.....|..|++. |.+.++ .|..|++.|.+...|..|+ .++|.|+.|++.|....
T Consensus 17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 94 (190)
T 2i13_A 17 PGEKPYACPECGKSFSRSDHLAEHQRT--HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLR 94 (190)
T ss_dssp --------------CCSSHHHHHGGGC--C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred CCCCCCcCCCCccccCCHHHHHHHHHH--cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHH
Confidence 467788888888888888888888887 776666 8888888888888888887 45778888888887542
Q ss_pred -------------ccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 81 -------------CNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 81 -------------C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
|+.|++.|.....|..|++.|++++++.|+.|++...
T Consensus 95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 144 (190)
T 2i13_A 95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFS 144 (190)
T ss_dssp HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccC
Confidence 7888888888888888888888888888888776554
No 20
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.67 E-value=1.4e-17 Score=142.24 Aligned_cols=106 Identities=26% Similarity=0.450 Sum_probs=96.1
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCc---
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG--- 80 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~--- 80 (342)
+++++|+|+.|++.|..+..|..|+++ |.+.++ .|..|++.|.+...|..|+ .++|.|+.|++.|....
T Consensus 45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 122 (190)
T 2i13_A 45 TGEKPYKCPECGKSFSDKKDLTRHQRT--HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122 (190)
T ss_dssp ---CCEECTTTCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCccCCCcCchhCCHHHHHHHHHh--cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHH
Confidence 478899999999999999999999999 777777 9999999999999999998 57899999999998753
Q ss_pred -------------ccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 81 -------------CNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 81 -------------C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
|+.|++.|...+.|..|+++|++++++.|+.|++...
T Consensus 123 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~ 172 (190)
T 2i13_A 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFS 172 (190)
T ss_dssp HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred HHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccC
Confidence 9999999999999999999999999999999987654
No 21
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.66 E-value=1.6e-16 Score=125.57 Aligned_cols=94 Identities=23% Similarity=0.357 Sum_probs=73.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc--------CCCcccCCCCCcccCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL--------TGPLSKAHCSGIFSDR 79 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~--------~~~~~C~~C~k~f~~~ 79 (342)
++++++|+|+.|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ ..+|.
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~----------- 68 (124)
T 2dlq_A 2 SSGSSGVECPTCHKKFLSKYYLKVHNRK--HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT----------- 68 (124)
T ss_dssp CCCCSSCCCTTTCCCCSSHHHHHHHHHH--HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEE-----------
T ss_pred CCCCCCCCCCCCCCcCCCHHHHHHHHHh--CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeE-----------
Confidence 5789999999999999999999999999 887777 9999999999999999997 22444
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAID 116 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~ 116 (342)
|+.|++.|.....|..|++.|++++++.|+.|++..
T Consensus 69 -C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 104 (124)
T 2dlq_A 69 -CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF 104 (124)
T ss_dssp -CSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEE
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchh
Confidence 455666666666666666666666666666665543
No 22
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.64 E-value=2.3e-16 Score=134.53 Aligned_cols=107 Identities=20% Similarity=0.307 Sum_probs=95.5
Q ss_pred CCCCcccc--cccccccCCHHHHHHHHhhhccCCCCC-cc--ccCccccCChhhhhhhc-----CCCcccC--CCCCccc
Q 019380 10 RSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KC--AVCQKLSKSFESLREHL-----TGPLSKA--HCSGIFS 77 (342)
Q Consensus 10 ~~~~~~~C--~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C--~~C~~~f~~~~~l~~H~-----~~~~~C~--~C~k~f~ 77 (342)
.++++|.| +.|++.|.....|..|+++ |+++++ .| ..|++.|.+...|..|+ .++|.|+ .|++.|.
T Consensus 8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 85 (190)
T 1tf6_A 8 VVYKRYICSFADCGAAYNKNWKLQAHLCK--HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT 85 (190)
T ss_dssp --CCCCBCSSTTTCCBCSSHHHHHHHHHH--HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEES
T ss_pred CCCcceeCCCCCCcchhCCHHHHHHHHHh--cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccC
Confidence 48999999 7899999999999999999 887777 99 88999999999999998 4689999 8999997
Q ss_pred CC------------------cc--cccccccCChhhHHHHHhhcCCCCCCCCcc--ccccccc
Q 019380 78 DR------------------GC--NLCMNIFDSPSSLIKHKEACSLSAPVPFKI--SGAIDEK 118 (342)
Q Consensus 78 ~~------------------~C--~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~--c~~~~~~ 118 (342)
.. .| +.|++.|...+.|..|+++|++++++.|+. |++....
T Consensus 86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~ 148 (190)
T 1tf6_A 86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL 148 (190)
T ss_dssp CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSS
T ss_pred CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcC
Confidence 53 28 889999999999999999999999999988 9887653
No 23
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.61 E-value=5.2e-16 Score=121.84 Aligned_cols=95 Identities=20% Similarity=0.419 Sum_probs=81.2
Q ss_pred CCCCCcccccc--cccccCCHHHHHHHHhhhccCCCCC-ccc--cCccccCChhhhhhhc-----CCCcccCCCCCcccC
Q 019380 9 KRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSD 78 (342)
Q Consensus 9 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~ 78 (342)
++++++|.|+. |++.|.....|..|+++ |.+.++ .|. .|++.|.+...|..|+ .++|.
T Consensus 1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~---------- 68 (119)
T 2jp9_A 1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRK--HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ---------- 68 (119)
T ss_dssp CCSSCCBCCCSTTSCCCBSCHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEE----------
T ss_pred CCCCeeeeCCCCCCcchhCCHHHHHHHHHh--hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCcc----------
Confidence 46899999986 99999999999999999 887777 998 7999999999999998 34454
Q ss_pred CcccccccccCChhhHHHHHhhcCCCCCCCC--cccccccc
Q 019380 79 RGCNLCMNIFDSPSSLIKHKEACSLSAPVPF--KISGAIDE 117 (342)
Q Consensus 79 ~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~--~~c~~~~~ 117 (342)
|+.|++.|.....|..|++.|++++++.| +.|++...
T Consensus 69 --C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 107 (119)
T 2jp9_A 69 --CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107 (119)
T ss_dssp --CTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEES
T ss_pred --CCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccC
Confidence 57788888888888888888888888888 77876543
No 24
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.61 E-value=2.6e-15 Score=115.51 Aligned_cols=93 Identities=23% Similarity=0.458 Sum_probs=80.6
Q ss_pred CCCCCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc---CCCcccCCCCCcccCCc
Q 019380 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRG 80 (342)
Q Consensus 5 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~ 80 (342)
...++..+++|.|+.|++.|.....|..|+++ |.+.++ .|..|++.|.....|..|+ .+..+. .
T Consensus 8 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~ 75 (106)
T 2ee8_A 8 GRLPSKTKKEFICKFCGRHFTKSYNLLIHERT--HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF----------K 75 (106)
T ss_dssp CCCCCCCCCCCBCSSSCCBCSSHHHHHHHHHH--HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTT----------S
T ss_pred CcCCcCCCcCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCe----------E
Confidence 34567789999999999999999999999999 887776 9999999999999999998 222222 4
Q ss_pred ccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
|+.|++.|.....|..|+++|++++++..
T Consensus 76 C~~C~~~f~~~~~L~~H~~~H~~~~~~~~ 104 (106)
T 2ee8_A 76 CQECGKGFCQSRTLAVHKTLHMQTSSPTA 104 (106)
T ss_dssp CSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred CCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence 78899999999999999999999998753
No 25
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=125.60 Aligned_cols=100 Identities=21% Similarity=0.369 Sum_probs=86.9
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCC---------CccccCccccCChhhhhhhc-----CCCcccCC--CC
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ---------PKCAVCQKLSKSFESLREHL-----TGPLSKAH--CS 73 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~---------~~C~~C~~~f~~~~~l~~H~-----~~~~~C~~--C~ 73 (342)
..+++|.|+.|++.|.+...|..|++.+ |.+.. +.|..|++.|.+...|..|+ .++|.|.. |+
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~-H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~ 99 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG 99 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTT-TSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhh-cCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence 4567899999999999999999999863 66544 47999999999999999998 57899987 99
Q ss_pred CcccCCc----------------ccc--cccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 74 GIFSDRG----------------CNL--CMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 74 k~f~~~~----------------C~~--C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
+.|.... |+. |++.|...+.|..|+++|++++++.|+
T Consensus 100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~ 154 (155)
T 2rpc_A 100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154 (155)
T ss_dssp CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence 9998642 886 999999999999999999999998875
No 26
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.59 E-value=2e-15 Score=113.94 Aligned_cols=86 Identities=33% Similarity=0.566 Sum_probs=76.8
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGC 81 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C 81 (342)
++.+++||+|+.|++.|.....|..|++. |.+.++ .|..|++.|.....|..|+ .++| .|
T Consensus 2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C 67 (96)
T 2dmd_A 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRC--HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF------------KC 67 (96)
T ss_dssp CCCCCCCCCBTTTTBCCCCHHHHHHHGGG--CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCE------------EC
T ss_pred CCCCCcCeECCCCCCccCCHHHHHHHHHh--cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCc------------cC
Confidence 35789999999999999999999999999 888777 9999999999999999998 2334 46
Q ss_pred cccccccCChhhHHHHHhhcCCCCCC
Q 019380 82 NLCMNIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 82 ~~C~k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
+.|++.|.....|..|+++|+++++.
T Consensus 68 ~~C~~~f~~~~~l~~H~~~h~~~~~p 93 (96)
T 2dmd_A 68 QICPYASRNSSQLTVHLRSHTGDSGP 93 (96)
T ss_dssp SSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred CCCCCccCCHHHHHHHHHHhcCCCCC
Confidence 88999999999999999999988764
No 27
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.58 E-value=1.1e-15 Score=121.01 Aligned_cols=86 Identities=21% Similarity=0.332 Sum_probs=61.9
Q ss_pred CCCccccc--ccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCccc
Q 019380 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (342)
Q Consensus 11 ~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (342)
++++|+|+ .|++.|.+...|..|+++ | +.++ .|..|++.|.+...|..|+ .++|.|.. +
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~ 68 (124)
T 1ubd_C 2 EPRTIACPHKGCTKMFRDNSAMRKHLHT--H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF----------E 68 (124)
T ss_dssp ---CEECCSTTCCCEESSHHHHHHHHGG--G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCS----------T
T ss_pred CCCcccCCCCCCcCccCCHHHHHHHHHH--c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCC----------C
Confidence 56899999 899999999999999999 8 5555 9999999999999999998 35677743 1
Q ss_pred ccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 83 LCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 83 ~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|++.|.....|..|+++|++++++.|
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~~~~~~~C 95 (124)
T 1ubd_C 69 GCGKRFSLDFNLRTHVRIHTGDRPYVC 95 (124)
T ss_dssp TCCCEESCHHHHHHHHHHHHCCCCCCC
T ss_pred CCcCccCCHHHHHHHHHHhCCCCceEC
Confidence 244444555555555555555555554
No 28
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.55 E-value=6.9e-15 Score=120.93 Aligned_cols=106 Identities=20% Similarity=0.338 Sum_probs=89.6
Q ss_pred CCcccccccccccCCHHHHHHHHhhh-ccCCCCC-ccc-----cCccccCChhhhhhhc-----CCCcccCC--CCCccc
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKIS-YHSVHQP-KCA-----VCQKLSKSFESLREHL-----TGPLSKAH--CSGIFS 77 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~-~H~~~~~-~C~-----~C~~~f~~~~~l~~H~-----~~~~~C~~--C~k~f~ 77 (342)
|.+|+|+.|++.|.++..|..|++.+ .|++.++ .|. .|++.|.+...|..|+ .++|.|+. |++.|.
T Consensus 1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 80 (155)
T 2gli_A 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS 80 (155)
T ss_dssp CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence 56899999999999999999999821 2777766 554 4569999999999998 57899975 999998
Q ss_pred CCc----------------ccc--cccccCChhhHHHHH-hhcCCCCCCCCcc--cccccc
Q 019380 78 DRG----------------CNL--CMNIFDSPSSLIKHK-EACSLSAPVPFKI--SGAIDE 117 (342)
Q Consensus 78 ~~~----------------C~~--C~k~F~~~~~L~~H~-~~h~~~~~~~~~~--c~~~~~ 117 (342)
... |+. |++.|...+.|..|+ +.|.+++++.|+. |++...
T Consensus 81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~ 141 (155)
T 2gli_A 81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYT 141 (155)
T ss_dssp SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEES
T ss_pred CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccC
Confidence 752 998 999999999999998 7999999999988 877643
No 29
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.53 E-value=8.9e-15 Score=124.67 Aligned_cols=102 Identities=22% Similarity=0.417 Sum_probs=90.5
Q ss_pred CCCCcccc--cccccccCCHHHHHHHHhhhccCCCCC-ccc--cCccccCChhhhhhhc-------CCCccc--CCCCCc
Q 019380 10 RSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-------TGPLSK--AHCSGI 75 (342)
Q Consensus 10 ~~~~~~~C--~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-------~~~~~C--~~C~k~ 75 (342)
+++++|+| +.|++.|.++..|..|+++ |.++++ .|. .|++.|.+...|..|+ .++|.| +.|++.
T Consensus 38 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~ 115 (190)
T 1tf6_A 38 TGEKPFPCKEEGCEKGFTSLHHLTRHSLT--HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA 115 (190)
T ss_dssp HCCCSSCCSSTTCCCCCSSHHHHHHHHTT--TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEE
T ss_pred CCCCCccCCCCCCChhhCCHHHHHHHHHH--ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccc
Confidence 36789999 8899999999999999999 888877 999 8999999999999997 247899 899999
Q ss_pred ccCCc----------------ccc--cccccCChhhHHHHHhhcCCCCCCCCcc---ccccc
Q 019380 76 FSDRG----------------CNL--CMNIFDSPSSLIKHKEACSLSAPVPFKI---SGAID 116 (342)
Q Consensus 76 f~~~~----------------C~~--C~k~F~~~~~L~~H~~~h~~~~~~~~~~---c~~~~ 116 (342)
|...+ |+. |+++|...+.|..|+++|++ +.|.. |+...
T Consensus 116 f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f 174 (190)
T 1tf6_A 116 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVG 174 (190)
T ss_dssp CSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCC
T ss_pred cCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCcc
Confidence 99752 988 99999999999999999998 77777 76553
No 30
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.52 E-value=1.8e-14 Score=108.39 Aligned_cols=82 Identities=28% Similarity=0.436 Sum_probs=72.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc---C----CCcccCCCCCcccCCc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---T----GPLSKAHCSGIFSDRG 80 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~----~~~~C~~C~k~f~~~~ 80 (342)
++++++|+|+.|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ . ++| .
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~------------~ 67 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLS--HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY------------I 67 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHH--SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB------------C
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHh--cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce------------E
Confidence 5789999999999999999999999999 888877 9999999999999999998 2 333 4
Q ss_pred ccccccccCChhhHHHHHh-hcCCC
Q 019380 81 CNLCMNIFDSPSSLIKHKE-ACSLS 104 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~-~h~~~ 104 (342)
|+.|++.|..+..|..|++ .|.++
T Consensus 68 C~~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 68 CQSCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp CSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred CCCccchhCCHHHHHHHHHHhcCCC
Confidence 6889999999999999997 56654
No 31
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=3e-14 Score=111.25 Aligned_cols=93 Identities=18% Similarity=0.135 Sum_probs=75.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC--ccccCcccc--CChhhhhhhc---CCCcccCCCCCcccCCcc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP--KCAVCQKLS--KSFESLREHL---TGPLSKAHCSGIFSDRGC 81 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~--~C~~C~~~f--~~~~~l~~H~---~~~~~C~~C~k~f~~~~C 81 (342)
.++++||+|+.|++.|..+..|..|++++.|.+.++ .|..|++.| .....|..|+ .+..++ .|
T Consensus 14 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~----------~C 83 (115)
T 2dmi_A 14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL----------KC 83 (115)
T ss_dssp CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC----------BC
T ss_pred eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce----------EC
Confidence 468999999999999999999999999733444444 699999999 8999999998 222222 47
Q ss_pred cccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 82 ~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
+.|++.|...+.|..|++.|+.......+.
T Consensus 84 ~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~ 113 (115)
T 2dmi_A 84 MYCGHSFESLQDLSVHMIKTKHYQKVSGPS 113 (115)
T ss_dssp SSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred CCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence 889999999999999999998776665543
No 32
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.51 E-value=8.7e-15 Score=108.93 Aligned_cols=81 Identities=21% Similarity=0.552 Sum_probs=70.0
Q ss_pred CCCccccc--ccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCccc
Q 019380 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (342)
Q Consensus 11 ~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (342)
+++||+|+ .|++.|.....|..|+++ |.+.++ .|..|++.|.+...|..|+ .++|. |+
T Consensus 1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 66 (90)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA------------CD 66 (90)
T ss_dssp --CCEECCSSSCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE------------CT
T ss_pred CCCceECCCCCCCCccCCHHHHHHHHHH--hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCcc------------CC
Confidence 47899998 699999999999999999 887777 9999999999999999998 33444 68
Q ss_pred ccccccCChhhHHHHHhhcCCCC
Q 019380 83 LCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 83 ~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|++.|...+.|..|+++|++++
T Consensus 67 ~C~~~f~~~~~l~~H~~~H~~~k 89 (90)
T 1a1h_A 67 ICGRKFARSDERKRHTKIHLRQK 89 (90)
T ss_dssp TTCCEESSHHHHHHHHGGGGC--
T ss_pred CCCchhCCHHHHHHHHHHhcccC
Confidence 89999999999999999999875
No 33
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.49 E-value=2.8e-14 Score=110.04 Aligned_cols=90 Identities=20% Similarity=0.270 Sum_probs=77.1
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhc--CCCcccCCCCCcccCCcccccc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHL--TGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~--~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
..+++++|+|+.|++.|.....|..|+++ |. ..+.|..|++.|.....|..|+ .+..+. .|+.|+
T Consensus 10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--H~-~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~----------~C~~C~ 76 (107)
T 1wjp_A 10 PVENKEVYQCRLCNAKLSSLLEQGSHERL--CR-NAAVCPYCSLRFFSPELKQEHESKCEYKKL----------TCLECM 76 (107)
T ss_dssp CCCCCCCCBCTTTCCBCSSHHHHHHHHHH--HH-HSBCCTTTCCCBSSHHHHHHHHHHCSTGGG----------EEGGGT
T ss_pred ccCCCcCeECCCCCCccCCHHHHHHHHHH--CC-CCccCCCCCCccCCHHHHHHHHHcCCCCCc----------cCcccc
Confidence 34688999999999999999999999999 73 3349999999999999999998 222222 478999
Q ss_pred cccCChhhHHHHHh-hcCCCCCCCCc
Q 019380 86 NIFDSPSSLIKHKE-ACSLSAPVPFK 110 (342)
Q Consensus 86 k~F~~~~~L~~H~~-~h~~~~~~~~~ 110 (342)
+.|.....|..|++ .|.+++++.++
T Consensus 77 ~~f~~~~~L~~H~~~~H~~~~~~~~~ 102 (107)
T 1wjp_A 77 RTFKSSFSIWRHQVEVHNQNNMAPTS 102 (107)
T ss_dssp EECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred chhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999997 99999998775
No 34
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.46 E-value=3.3e-14 Score=103.74 Aligned_cols=76 Identities=32% Similarity=0.605 Sum_probs=68.1
Q ss_pred cccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccc
Q 019380 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNI 87 (342)
Q Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~ 87 (342)
||+|+.|++.|.....|..|+++ |.+.++ .|..|++.|.+...|..|+ .++|. |+.|++.
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~ 66 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLI--HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK------------CQVCGKA 66 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH--HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEE------------CTTTSCE
T ss_pred CccCCCCcccccCchhHHHHHHH--cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCc------------CCCcchh
Confidence 69999999999999999999999 877777 9999999999999999998 33444 6889999
Q ss_pred cCChhhHHHHHhhcCC
Q 019380 88 FDSPSSLIKHKEACSL 103 (342)
Q Consensus 88 F~~~~~L~~H~~~h~~ 103 (342)
|...+.|..|+++|+|
T Consensus 67 f~~~~~l~~H~~~H~g 82 (82)
T 2kmk_A 67 FSQSSNLITHSRKHTG 82 (82)
T ss_dssp ESSHHHHHHHHHHHC-
T ss_pred hCChHHHHHHHHhhCC
Confidence 9999999999999875
No 35
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.44 E-value=1.4e-13 Score=113.09 Aligned_cols=93 Identities=33% Similarity=0.617 Sum_probs=82.2
Q ss_pred CCCCCccccccc-----ccccCCHHHHHHHHhhhccCCCCC-cccc--CccccCChhhhhhhc-----CCCcccCC--CC
Q 019380 9 KRSTARHKCVAC-----YKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAH--CS 73 (342)
Q Consensus 9 ~~~~~~~~C~~C-----~k~f~~~~~L~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~--C~ 73 (342)
.+++++|.|+.| ++.|..+..|..|+++ |++.++ .|.. |++.|.+...|..|+ .++|.|+. |+
T Consensus 29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~ 106 (155)
T 2gli_A 29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR--HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCS 106 (155)
T ss_dssp SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH--HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCC
T ss_pred CCCCcceeCCCCCccchhhhhhhHHHHHHHHHh--cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCC
Confidence 357889998753 4999999999999999 877776 9985 999999999999998 56899998 99
Q ss_pred CcccCCc-----------------ccc--cccccCChhhHHHHHhhcCC
Q 019380 74 GIFSDRG-----------------CNL--CMNIFDSPSSLIKHKEACSL 103 (342)
Q Consensus 74 k~f~~~~-----------------C~~--C~k~F~~~~~L~~H~~~h~~ 103 (342)
+.|...+ |+. |+++|...+.|..|+++|+|
T Consensus 107 ~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 107 KAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp CEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred CccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 9998753 988 99999999999999999986
No 36
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.43 E-value=9.2e-14 Score=107.55 Aligned_cols=81 Identities=31% Similarity=0.545 Sum_probs=72.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (342)
.+++++|+| .|++.|.....|..|++. |.+.++ .|..|++.|.+...|..|+ .++| .|+
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~ 69 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSM--HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY------------ECN 69 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHH--HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCE------------ECS
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHH--cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCe------------eCC
Confidence 468999999 999999999999999999 888777 9999999999999999998 2233 468
Q ss_pred ccccccCChhhHHHHHhhcCCC
Q 019380 83 LCMNIFDSPSSLIKHKEACSLS 104 (342)
Q Consensus 83 ~C~k~F~~~~~L~~H~~~h~~~ 104 (342)
.|++.|.....|..|++.|+..
T Consensus 70 ~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 70 ICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp SSCCEESCHHHHHHHHHHHHHH
T ss_pred CCcchhcCHHHHHHHHHHcccc
Confidence 8999999999999999998743
No 37
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.37 E-value=1.7e-13 Score=94.21 Aligned_cols=59 Identities=22% Similarity=0.361 Sum_probs=48.5
Q ss_pred CCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCC
Q 019380 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDS 90 (342)
Q Consensus 11 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~ 90 (342)
.||||+|++|++.|..++.|..|+++ |++++| | .|++||++|.+
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp----------------------~------------~C~~C~k~F~~ 44 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRA--HLGYRP----------------------R------------SCPECGKCFRD 44 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHH--HHTCCC----------------------E------------ECTTTCCEESS
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHH--hCCCcC----------------------e------------ECCCCCCCcCC
Confidence 37999999999999999999999999 887765 2 24667777788
Q ss_pred hhhHHHHHhhcCCCC
Q 019380 91 PSSLIKHKEACSLSA 105 (342)
Q Consensus 91 ~~~L~~H~~~h~~~~ 105 (342)
.++|.+|+++|.|++
T Consensus 45 ~~~L~~H~~~Htgep 59 (60)
T 4gzn_C 45 QSEVNRHLKVHQNKP 59 (60)
T ss_dssp HHHHHHHGGGGSCC-
T ss_pred HHHHHHHhCccCCCC
Confidence 888888888888764
No 38
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.37 E-value=8.5e-13 Score=99.99 Aligned_cols=86 Identities=24% Similarity=0.446 Sum_probs=72.9
Q ss_pred CCCCCCCCcccccc--cccccCCHHHHHHHHhhhccCCCCC-ccc--cCccccCChhhhhhhc---CCCcccCCCCCccc
Q 019380 6 ELPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL---TGPLSKAHCSGIFS 77 (342)
Q Consensus 6 ~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~ 77 (342)
.++...+++|.|+. |++.|.....|..|+++ |.+.++ .|. .|++.|.....|..|+ .+..+.
T Consensus 7 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-------- 76 (100)
T 2ebt_A 7 GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT--HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPF-------- 76 (100)
T ss_dssp CCCCCSCCCEECCSSSCCCEESCHHHHHHHHHH--HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSC--------
T ss_pred CcccccCcceEcCCCCCCCcccCHHHHHHHHHH--hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCe--------
Confidence 44556788999996 99999999999999999 888777 996 6999999999999998 232222
Q ss_pred CCcccccccccCChhhHHHHHhhcCC
Q 019380 78 DRGCNLCMNIFDSPSSLIKHKEACSL 103 (342)
Q Consensus 78 ~~~C~~C~k~F~~~~~L~~H~~~h~~ 103 (342)
.|+.|++.|.....|..|+++|.+
T Consensus 77 --~C~~C~~~f~~~~~l~~H~~~H~~ 100 (100)
T 2ebt_A 77 --QCGVCNRSFSRSDHLALHMKRHQN 100 (100)
T ss_dssp --BCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred --ECCCCcCccCCHHHHHHHHHHhCC
Confidence 468899999999999999999874
No 39
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.35 E-value=5.4e-14 Score=104.48 Aligned_cols=78 Identities=19% Similarity=0.410 Sum_probs=69.9
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc----CCCcccCCCCCcccCCccccccc
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMN 86 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~k~f~~~~C~~C~k 86 (342)
++||+|+.|++.|..+..|..|+++ |+++++ .|..|++.|.....|..|+ ..++ .|+.|++
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~------------~c~~C~~ 66 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRT--HTGEKPFACDICGRKFARSDERKRHRDIQHILPI------------LEDKVEE 66 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHH--HHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHH------------HHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHH--cCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcc------------hHHHHHH
Confidence 6899999999999999999999999 888887 9999999999999999998 2223 4789999
Q ss_pred ccCChhhHHHHHhhcCC
Q 019380 87 IFDSPSSLIKHKEACSL 103 (342)
Q Consensus 87 ~F~~~~~L~~H~~~h~~ 103 (342)
.|.....|..|++.+++
T Consensus 67 ~f~~~~~L~~H~~~~h~ 83 (88)
T 1llm_C 67 LLSKNYHLENEVARLKK 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHH
Confidence 99999999999987764
No 40
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.29 E-value=2.8e-12 Score=94.89 Aligned_cols=77 Identities=27% Similarity=0.552 Sum_probs=68.0
Q ss_pred CCCcccccc--cccccCCHHHHHHHHhhhccCCCCC-ccc--cCccccCChhhhhhhc-----CCCcccCCCCCcccCCc
Q 019380 11 STARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG 80 (342)
Q Consensus 11 ~~~~~~C~~--C~k~f~~~~~L~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~ 80 (342)
.+++|.|+. |++.|..+..|..|+++ |.+.++ .|. .|++.|.+...|..|+ .++| .
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~------------~ 67 (89)
T 2wbs_A 2 RTATHTCDYAGCGKTYTKSSHLKAHLRT--HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF------------Q 67 (89)
T ss_dssp -CCCEECCSTTTCCEESSHHHHHHHHTT--SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCE------------E
T ss_pred CCCCeeCCCCCCCCcCCCHHHHHHHHHh--cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCc------------c
Confidence 457899999 99999999999999999 888887 997 6999999999999998 3344 4
Q ss_pred ccccccccCChhhHHHHHhhc
Q 019380 81 CNLCMNIFDSPSSLIKHKEAC 101 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h 101 (342)
|+.|++.|...+.|..|+++|
T Consensus 68 C~~C~~~f~~~~~l~~H~~~H 88 (89)
T 2wbs_A 68 CQKCDRAFSRSDHLALHMKRH 88 (89)
T ss_dssp CSSSSCEESSHHHHHHHGGGG
T ss_pred CCCCCcccCCHHHHHHHHHhh
Confidence 688999999999999999987
No 41
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.28 E-value=2.9e-12 Score=92.72 Aligned_cols=53 Identities=25% Similarity=0.440 Sum_probs=38.2
Q ss_pred CCCCCcccccc--cccccCCHHHHHHHHh-hhccCCCCC-cccc--CccccCChhhhhhhc
Q 019380 9 KRSTARHKCVA--CYKQFKRKDHLIEHMK-ISYHSVHQP-KCAV--CQKLSKSFESLREHL 63 (342)
Q Consensus 9 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~-~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~ 63 (342)
++++++|.|+. |++.|.++..|..|++ . |+++++ .|.. |++.|.+...|..|+
T Consensus 2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~--H~~~~~~~C~~~~C~k~f~~~~~L~~H~ 60 (79)
T 2dlk_A 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQ--HIHQKSFSCPEPACGKSFNFKKHLKEHM 60 (79)
T ss_dssp CSCCSSEECSSTTTCCEESSHHHHHHHHHHG--GGSCCCEECSCTTTCCEESSHHHHHHHH
T ss_pred CCCCCCccCCCCCCcCccCCHHHHHHHHHHH--hCCCCCeECCCCCCcCccCCHHHHHHHH
Confidence 57899999986 9999999999999998 7 776655 5544 444444444444443
No 42
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.28 E-value=1.9e-12 Score=94.84 Aligned_cols=74 Identities=27% Similarity=0.501 Sum_probs=66.6
Q ss_pred cccc--cccccccCCHHHHHHHHhhhccCCCCC-cccc--CccccCChhhhhhhc---CCCcccCCCCCcccCCcccc--
Q 019380 14 RHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNL-- 83 (342)
Q Consensus 14 ~~~C--~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~-- 83 (342)
||+| +.|++.|..+..|..|+++ |+++++ .|.. |++.|.+...|..|+ .+ |. |+.
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~------------C~~~~ 65 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFS--HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YP------------CKKDD 65 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EE------------CCSCS
T ss_pred CccCCCCCCCcccCCHHHHHHHHHH--hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CC------------CCCCC
Confidence 6999 9999999999999999999 888887 9988 999999999999998 33 54 456
Q ss_pred -cccccCChhhHHHHHhhcC
Q 019380 84 -CMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 84 -C~k~F~~~~~L~~H~~~h~ 102 (342)
|++.|...+.|..|+++|+
T Consensus 66 ~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 66 SCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp SCCCEESSHHHHHHHHHHCC
T ss_pred CCCCccCCHHHHHHHHHhcC
Confidence 9999999999999999875
No 43
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.22 E-value=2.2e-11 Score=87.79 Aligned_cols=67 Identities=30% Similarity=0.492 Sum_probs=55.6
Q ss_pred CCCCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCccccccc
Q 019380 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMN 86 (342)
Q Consensus 7 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k 86 (342)
-...++++|+|+.|++.|.....|..|+++ |+++++ | .|+.|++
T Consensus 11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~----------------------~------------~C~~C~~ 54 (77)
T 2cot_A 11 WQQRERRRYKCDECGKSFSHSSDLSKHRRT--HTGEKP----------------------Y------------KCDECGK 54 (77)
T ss_dssp SCCCCSCSSBCSSSCCBCSCHHHHHHHHTT--TCCSCS----------------------E------------ECSSSCC
T ss_pred CcCCCCCCEECCCCCcccCCHHHHHHHHHH--cCCCcC----------------------e------------eCCCCCC
Confidence 345678999999999999999999999998 765433 2 3567888
Q ss_pred ccCChhhHHHHHhhcCCCCCCCC
Q 019380 87 IFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 87 ~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|.....|..|+++|++++|+.|
T Consensus 55 ~f~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 55 AFIQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp EESSHHHHHHHGGGSCCCCCCCC
T ss_pred ccCCHHHHHHHHHHhCCCCCCCC
Confidence 88888899999999999998876
No 44
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.21 E-value=9e-12 Score=97.98 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=56.2
Q ss_pred CCCCC-ccccCccccCChhhhhhhc---C--CCcccCCCCCcccCCcccccccccCChhhHHHHHhh---cCCCCCCCCc
Q 019380 40 SVHQP-KCAVCQKLSKSFESLREHL---T--GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA---CSLSAPVPFK 110 (342)
Q Consensus 40 ~~~~~-~C~~C~~~f~~~~~l~~H~---~--~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~---h~~~~~~~~~ 110 (342)
++.++ .|..|++.|.+...|..|+ . ++| .|+.|++.|.....|..|++. +.+++++.|+
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~ 70 (124)
T 2dlq_A 3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPF------------ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS 70 (124)
T ss_dssp CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSC------------BCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS
T ss_pred CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCe------------ECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC
Confidence 45555 9999999999999999998 2 344 468899999999999999985 6788999999
Q ss_pred cccccccc
Q 019380 111 ISGAIDEK 118 (342)
Q Consensus 111 ~c~~~~~~ 118 (342)
.|++....
T Consensus 71 ~C~~~f~~ 78 (124)
T 2dlq_A 71 VCQETFRR 78 (124)
T ss_dssp SSCCEESS
T ss_pred CCCCccCC
Confidence 99987653
No 45
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.21 E-value=1.6e-11 Score=87.82 Aligned_cols=66 Identities=29% Similarity=0.533 Sum_probs=53.2
Q ss_pred CCCCCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 6 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
....+++++|+|+.|++.|..+..|..|+++ |+++++ | .|+.|+
T Consensus 9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~----------------------~------------~C~~C~ 52 (74)
T 2lce_A 9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTV--HTGEKP----------------------Y------------RCNICG 52 (74)
T ss_dssp --CCCCCCSBCCTTSSCCBSCHHHHHHHHHH--HCCCCS----------------------E------------ECTTTC
T ss_pred ccccCCCCCeECCCCCceeCCHHHHHHHHHH--cCCCCC----------------------E------------ECCCCC
Confidence 3455689999999999999999999999999 765433 2 356778
Q ss_pred cccCChhhHHHHHhhcCCCCCC
Q 019380 86 NIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 86 k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
+.|...+.|.+|+++|++++||
T Consensus 53 k~f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 53 AQFNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp CEESCHHHHHHHHHHHCCSCCC
T ss_pred chhCCHHHHHHHHHhcCCCCCC
Confidence 8888888899999999888774
No 46
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.17 E-value=8.5e-12 Score=100.22 Aligned_cols=74 Identities=16% Similarity=0.323 Sum_probs=61.0
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNL 83 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~ 83 (342)
++++||+|+.|++.|.++..|..|+++ |+++++ .|..|++.|.+.+.|..|+ ..++.|..| | .|..
T Consensus 46 ~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~---~---~C~~ 117 (133)
T 2lt7_A 46 SWEKKYPCRYCEKVFPLAEYRTKHEIH--HTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKL---Y---RLHP 117 (133)
T ss_dssp HCCSCEECSSSSCEESSHHHHHHHHHH--HHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCC---E---EECC
T ss_pred CCCCCeeCCccCeecccccchhhhccc--cCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCC---e---ecCC
Confidence 478999999999999999999999999 999888 9999999999999999998 233333222 1 4788
Q ss_pred cccccCCh
Q 019380 84 CMNIFDSP 91 (342)
Q Consensus 84 C~k~F~~~ 91 (342)
|++.|...
T Consensus 118 C~k~~~~~ 125 (133)
T 2lt7_A 118 CRSLQIRQ 125 (133)
T ss_dssp CCSSCCCC
T ss_pred CCchhhhc
Confidence 88877643
No 47
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.11 E-value=3.9e-11 Score=91.63 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=59.8
Q ss_pred CCCCCcccccccccccCCHHHHHHHHh-hhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~ 87 (342)
.++++||+|+.|++.|..+..|..|++ + |++... .++| .|+.||++
T Consensus 13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~--H~~~~~-------------------ekpf------------~C~~Cgk~ 59 (102)
T 2ghf_A 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSE--HPNVVL-------------------NSSY------------VCVECNFL 59 (102)
T ss_dssp CCCCSSEECSSCSCEESCHHHHHHHHHHH--CSSCCC-------------------SCCE------------EETTTTEE
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhh--CCCCCC-------------------CCCc------------CCCCCCcc
Confidence 459999999999999999999999997 6 743100 1233 35778888
Q ss_pred cCChhhHHHH-HhhcCCCCCCCCcccccccc
Q 019380 88 FDSPSSLIKH-KEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 88 F~~~~~L~~H-~~~h~~~~~~~~~~c~~~~~ 117 (342)
|..++.|..| +++|.+++||.|.++.....
T Consensus 60 F~~~~~L~~H~~r~Htgekpy~C~~~~~~~~ 90 (102)
T 2ghf_A 60 TKRYDALSEHNLKYHPGEENFKLTMVKRNNQ 90 (102)
T ss_dssp ESSTHHHHTHHHHTSTTCCCEEEEECCCSSC
T ss_pred cCCHHHHHHHHHHhcCCCCCeeCCcccCCCc
Confidence 8888999999 78999999999987666643
No 48
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.10 E-value=3.1e-11 Score=82.82 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=35.1
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
.|++||++|...+.|..|+++|.+++|+.|++|+++..
T Consensus 6 ~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~ 43 (60)
T 4gzn_C 6 FCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFR 43 (60)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEES
T ss_pred cCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcC
Confidence 36889999999999999999999999999999998765
No 49
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.09 E-value=5e-11 Score=93.02 Aligned_cols=68 Identities=22% Similarity=0.307 Sum_probs=57.6
Q ss_pred CCCCC-cccc--CccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 40 SVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 40 ~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
+++++ .|.. |++.|.+...|..|+ .++|.| .++.|++.|.....|..|++.|++++++.|+.
T Consensus 2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C----------~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 71 (119)
T 2jp9_A 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQC----------DFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71 (119)
T ss_dssp CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEEC----------CSTTCCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccC----------CCCCCcCccCCHHHHHHHHHHcCCCCCccCCc
Confidence 45555 9987 999999999999998 345655 12379999999999999999999999999999
Q ss_pred cccccc
Q 019380 112 SGAIDE 117 (342)
Q Consensus 112 c~~~~~ 117 (342)
|++...
T Consensus 72 C~~~f~ 77 (119)
T 2jp9_A 72 CQRKFS 77 (119)
T ss_dssp TCCEES
T ss_pred cCchhC
Confidence 998765
No 50
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=3.7e-11 Score=91.01 Aligned_cols=75 Identities=16% Similarity=0.257 Sum_probs=55.8
Q ss_pred cCCHHHHHHHHhhhccCCCCC-ccccCccccC-Chhhhhhhc---CC-CcccCCCCCcccCCcccccccccCChhhHHHH
Q 019380 24 FKRKDHLIEHMKISYHSVHQP-KCAVCQKLSK-SFESLREHL---TG-PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKH 97 (342)
Q Consensus 24 f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~-~~~~l~~H~---~~-~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H 97 (342)
+.....+..|+++ |++.++ .|..|++.|. ....|..|+ .+ ..++ .|+.|++.|..+..|.+|
T Consensus 6 ~~~~~~~~~h~~~--h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~----------~C~~C~k~F~~~~~L~~H 73 (98)
T 2gqj_A 6 SGPGGPEEQWQRA--IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDAL----------KCQHCRKQFKSKAGLNYH 73 (98)
T ss_dssp CCCCCSCSHHHHT--TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHH----------SCSSSCCCCSCHHHHHHH
T ss_pred CCCCCcHHHHHHH--hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCE----------ECCCCCCccCCHHHHHHH
Confidence 4444556677777 777666 7888888888 778888776 22 2222 468899999999999999
Q ss_pred HhhcCCCCCCCCc
Q 019380 98 KEACSLSAPVPFK 110 (342)
Q Consensus 98 ~~~h~~~~~~~~~ 110 (342)
+++|++++|....
T Consensus 74 ~~~h~~~kp~~~~ 86 (98)
T 2gqj_A 74 TMAEHSAKPSDAE 86 (98)
T ss_dssp HHHHSCSCSSCCC
T ss_pred HHHHcCCCCCCCC
Confidence 9999999986544
No 51
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.06 E-value=1.3e-10 Score=81.98 Aligned_cols=65 Identities=29% Similarity=0.438 Sum_probs=52.1
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~ 87 (342)
+.+++++|+|+.|++.|..+..|..|+++ |+++++ | .|+.|++.
T Consensus 3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~----------------------~------------~C~~C~~~ 46 (70)
T 1x5w_A 3 SGSSGHPEKCSECSYSCSSKAALRIHERI--HCTDRP----------------------F------------KCNYCSFD 46 (70)
T ss_dssp SCCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSCS----------------------E------------ECSSSSCE
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCC----------------------E------------eCCCCCCc
Confidence 45789999999999999999999999999 775543 2 24667777
Q ss_pred cCChhhHHHHHhhcCCCCCCC
Q 019380 88 FDSPSSLIKHKEACSLSAPVP 108 (342)
Q Consensus 88 F~~~~~L~~H~~~h~~~~~~~ 108 (342)
|.....|..|++.|++++|..
T Consensus 47 f~~~~~L~~H~~~h~~~~p~p 67 (70)
T 1x5w_A 47 TKQPSNLSKHMKKFHGDMSGP 67 (70)
T ss_dssp ESSHHHHHHHHHHHHSSSCCS
T ss_pred cCCHHHHHHHHHHHhCCCCCC
Confidence 777788888888888877754
No 52
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.05 E-value=9.9e-11 Score=86.25 Aligned_cols=52 Identities=25% Similarity=0.409 Sum_probs=39.2
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhh
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (342)
++.+++|.|++|++.|.++..|.+|+++ |++++| .|..|++.|.+...|.+|
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H 75 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRL--LHAAQVFPCKYCPATFYSSPGLTRH 75 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHT--TSCSSSEECTTSSCEESSHHHHHHH
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhh--ccCCCccCCCCCCCEeCCHHHHHHh
Confidence 4567889999999999999999999999 887765 555555554444444444
No 53
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.05 E-value=5.9e-11 Score=87.05 Aligned_cols=74 Identities=22% Similarity=0.343 Sum_probs=55.6
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccC
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFD 89 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~ 89 (342)
++++||+|+.|++.|.....|..|++. |...... .++| .|+.|++.|.
T Consensus 11 ~~~k~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~------------------~~~~------------~C~~C~~~f~ 58 (86)
T 1x6h_A 11 TGEKPYACSHCDKTFRQKQLLDMHFKR--YHDPNFV------------------PAAF------------VCSKCGKTFT 58 (86)
T ss_dssp CCCCCEECSSSSCEESSHHHHHHHHHH--TTCSSCC------------------CCCE------------ECSSSCCEES
T ss_pred cCCCCCcCCCCCCccCCHHHHHHHHHH--hcCCcCC------------------Ccce------------ECCCCCChhC
Confidence 567888888888888888888888876 3322100 1233 3678888899
Q ss_pred ChhhHHHHHhhcCCCCCCCCcccccc
Q 019380 90 SPSSLIKHKEACSLSAPVPFKISGAI 115 (342)
Q Consensus 90 ~~~~L~~H~~~h~~~~~~~~~~c~~~ 115 (342)
....|..|+++|++++++.|..|+..
T Consensus 59 ~~~~L~~H~~~h~~~~~~~~~~~~~~ 84 (86)
T 1x6h_A 59 RRNTMARHADNCAGPDGVEGENSGPS 84 (86)
T ss_dssp CHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred CHHHHHHHHHHccCCCCcccCCCCCC
Confidence 99999999999999999999887654
No 54
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.04 E-value=2.2e-10 Score=83.91 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=35.9
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCcccc
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS 53 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f 53 (342)
+++|+|+.|++.|..+..|..|+++ |.++++ .|..|+..|
T Consensus 45 ~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~~~~~~~~~ 85 (86)
T 1x6h_A 45 PAAFVCSKCGKTFTRRNTMARHADN--CAGPDGVEGENSGPSS 85 (86)
T ss_dssp CCCEECSSSCCEESCHHHHHHHHHH--CCCCCSCCCCCCCCCC
T ss_pred CcceECCCCCChhCCHHHHHHHHHH--ccCCCCcccCCCCCCC
Confidence 4799999999999999999999999 888777 899998765
No 55
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.04 E-value=7.4e-11 Score=79.57 Aligned_cols=50 Identities=30% Similarity=0.573 Sum_probs=33.9
Q ss_pred CCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhh
Q 019380 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (342)
Q Consensus 11 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (342)
+++||+|+.|++.|..+..|..|+++ |+++++ .|..|++.|.....|..|
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H 51 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLNIHLRT--HTGEKPYKCEFCEYAAAQKTSLRYH 51 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHHHHHHH--HHCCCCEECSSSSCEESSHHHHHHH
T ss_pred CCCCccCCCCcchhCChHHHHHHHHH--cCCCCCcCCCCCcchhCCHHHHHHH
Confidence 47899999999999999999999999 776655 554444444444444444
No 56
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.97 E-value=3e-10 Score=80.59 Aligned_cols=63 Identities=27% Similarity=0.527 Sum_probs=49.2
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~ 87 (342)
..++++||+|+.|++.|..+..|..|+++ |+++++ | .|+.|++.
T Consensus 8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~----------------------~------------~C~~C~~~ 51 (72)
T 1x6e_A 8 IHSGEKPYGCVECGKAFSRSSILVQHQRV--HTGEKP----------------------Y------------KCLECGKA 51 (72)
T ss_dssp TTTTCCCEECSSSCCEESSHHHHHHHHHG--GGCSCC----------------------E------------ECSSSCCE
T ss_pred ccCCCCCccCCCCCCccCCHHHHHHHHHh--cCCCCC----------------------e------------ECCCCCcc
Confidence 35688999999999999999999999999 765543 2 24667777
Q ss_pred cCChhhHHHHHhhcCCCCC
Q 019380 88 FDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 88 F~~~~~L~~H~~~h~~~~~ 106 (342)
|.....|.+|+++|+++.+
T Consensus 52 f~~~~~L~~H~~~H~~~~~ 70 (72)
T 1x6e_A 52 FSQNSGLINHQRIHTSGPS 70 (72)
T ss_dssp ESSHHHHHHHHHHHHSSSS
T ss_pred cCCHHHHHHHHHhcCCCCC
Confidence 7777788888888776543
No 57
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=98.96 E-value=7.8e-11 Score=93.60 Aligned_cols=80 Identities=18% Similarity=0.209 Sum_probs=63.3
Q ss_pred CCCcccccccccccC------CHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc---CCCcccCCCCCcccCCc
Q 019380 11 STARHKCVACYKQFK------RKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRG 80 (342)
Q Consensus 11 ~~~~~~C~~C~k~f~------~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~ 80 (342)
.++++.|+.|++.|. .+..|..|+ . |+++++ .|..|++.|.....|..|+ .++| .
T Consensus 38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~--h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~------------~ 102 (129)
T 2wbt_A 38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-A--SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK------------V 102 (129)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-H--HHHHCSEECTTTCCEESSHHHHHHHHHHTCCCC------------B
T ss_pred hhCcccchhhhcccCCCcccCCHHHHHHHH-H--hCCCCCeECCCCCcccCCHhHHHHHHHHCCCCC------------C
Confidence 456677888876665 667777777 4 666666 9999999999999999997 3344 4
Q ss_pred ccccccccCChhhHHHHHhhcCCCC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
|+.|++.|..++.|..|++.|++.-
T Consensus 103 C~~C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 103 CPVCKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp CTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred CCCCCcccCCHHHHHHHHHHHCCcc
Confidence 6889999999999999999999763
No 58
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=81.42 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=55.9
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCCh
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSP 91 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~~ 91 (342)
..|.|+.|++.|.++..|..|++++ |++.++ .+..|. .| .|+.|++.|..+
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~-H~~~~~~~~~~c~---------------~~------------~C~~C~k~f~~~ 75 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCY---------------WE------------ECPREGKSFKAK 75 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHT-TTCCTTCSCCCCC---------------CT------------TCSSTTCCCSSH
T ss_pred CCCcccccccccCCHHHHHHHHHHh-ccCCCCCCcccee---------------cc------------CCCCCCcccCCH
Confidence 3477999999999999999999863 666554 332221 11 578999999999
Q ss_pred hhHHHHHhhcCCCCCCCCc
Q 019380 92 SSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 92 ~~L~~H~~~h~~~~~~~~~ 110 (342)
..|..|+++|++++|+.|+
T Consensus 76 ~~L~~H~~~H~~~k~~~C~ 94 (95)
T 2ej4_A 76 YKLVNHIRVHTGEKSGPSS 94 (95)
T ss_dssp HHHHHHHHHHHTCCCCSSC
T ss_pred HHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999986
No 59
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=7.4e-12 Score=88.88 Aligned_cols=69 Identities=17% Similarity=0.122 Sum_probs=58.9
Q ss_pred HHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCC
Q 019380 28 DHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 28 ~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
..|..|+++ |+++++ .|..|++.|.....|.. .++| .|+.|++.|...+.|..|+++|+++++
T Consensus 4 ~~l~~H~~~--h~~~~~~~C~~C~k~f~~~~~l~~--~~~~------------~C~~C~~~f~~~~~l~~H~~~H~~~~~ 67 (73)
T 2ctu_A 4 GSSGKRQKI--HLGDRSQKCSKCGIIFIRRSTLSR--RKTP------------MCEKCRKDSCQEAALNKDEGNESGKKT 67 (73)
T ss_dssp CSCCCCCCC--CCCCSEEECSSSCCEEECCCCCCC--SSSC------------CCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred hhHHHHHHH--hCCCCCeeCCcccchhCCHHHhCc--CCCC------------CCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence 446778888 888887 99999999999888876 3333 478999999999999999999999999
Q ss_pred CCCccc
Q 019380 107 VPFKIS 112 (342)
Q Consensus 107 ~~~~~c 112 (342)
+.|++|
T Consensus 68 ~~C~~C 73 (73)
T 2ctu_A 68 SGPSSG 73 (73)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 999876
No 60
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=2.1e-11 Score=94.85 Aligned_cols=82 Identities=13% Similarity=0.092 Sum_probs=67.2
Q ss_pred HHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhcC--CCcccCCCCCcccCCccccccccc--CChhhHHHHHhhcC
Q 019380 28 DHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLT--GPLSKAHCSGIFSDRGCNLCMNIF--DSPSSLIKHKEACS 102 (342)
Q Consensus 28 ~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~--~~~~C~~C~k~f~~~~C~~C~k~F--~~~~~L~~H~~~h~ 102 (342)
..|..|+++ |+++++ .|..|++.|.+...|..|+. +...+..+ ..|+.|++.| .....|..|+++|.
T Consensus 5 ~~l~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~------~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 5 SSGKLYGSI--FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH------ETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp CCCCCCCCC--CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC------CCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred hhhhhheee--eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCC------ccCCCCCcccccccHHHHHHHhhccC
Confidence 456788988 888888 99999999999999999983 23333111 1388999998 89999999999999
Q ss_pred CCCCCCCcccccccc
Q 019380 103 LSAPVPFKISGAIDE 117 (342)
Q Consensus 103 ~~~~~~~~~c~~~~~ 117 (342)
+++++.|++|++...
T Consensus 77 ~~~~~~C~~C~k~f~ 91 (115)
T 2dmi_A 77 AQKVLKCMYCGHSFE 91 (115)
T ss_dssp CCSSCBCSSSCCBCS
T ss_pred CCcceECCCCCCccC
Confidence 999999999987654
No 61
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=98.94 E-value=4.5e-10 Score=76.49 Aligned_cols=48 Identities=27% Similarity=0.652 Sum_probs=35.4
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhh
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (342)
+||+|+.|++.|.++..|..|+++ |+++++ .|..|++.|.+...|..|
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H 49 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNEKPYPCGLCNRAFTRRDLLIRH 49 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHT--TTSSCSEECTTTCCEESSHHHHHHH
T ss_pred CcCcCCCCccccCCHHHHHHHHHH--hCCCCCccCCCCCCccCCHHHHHHH
Confidence 589999999999999999999999 876655 454444444444444444
No 62
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=98.93 E-value=3.3e-10 Score=78.82 Aligned_cols=60 Identities=17% Similarity=0.394 Sum_probs=43.2
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhcc-CCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYH-SVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H-~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~ 87 (342)
.++++||+|+.|++.|..+..|..|++.+ | +++++ | .|+.|++.
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~-H~~~~~~----------------------~------------~C~~C~k~ 49 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTS-HKRNVKV----------------------Y------------PCPFCFKE 49 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHH-SSSSCCC----------------------E------------ECTTTCCE
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHH-cCCCCcC----------------------e------------ECCCCCCc
Confidence 35789999999999999999999999873 4 34433 2 24556666
Q ss_pred cCChhhHHHHHhhcCC
Q 019380 88 FDSPSSLIKHKEACSL 103 (342)
Q Consensus 88 F~~~~~L~~H~~~h~~ 103 (342)
|..++.|..|++.|++
T Consensus 50 f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 50 FTRKDNMTAHVKIIHK 65 (66)
T ss_dssp ESCHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHcC
Confidence 6666666666666654
No 63
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=98.93 E-value=8.6e-10 Score=86.65 Aligned_cols=85 Identities=24% Similarity=0.383 Sum_probs=70.6
Q ss_pred CCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc--CccccCChhhhhhhc-----CCCcccCCCCCcccCCccc
Q 019380 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (342)
Q Consensus 11 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (342)
++++|.|+.|++.|..+..|..|+++ |.++++ .|.. |++.|.+...|..|+ .++|.| .++
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C----------~~~ 98 (124)
T 1ubd_C 31 GPRVHVCAECGKAFVESSKLKRHQLV--HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC----------PFD 98 (124)
T ss_dssp SCCCEECTTTCCEESSHHHHHHHGGG--TSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCC----------CST
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceEC----------CCC
Confidence 67899999999999999999999999 888887 9975 999999999999998 345554 114
Q ss_pred ccccccCChhhHHHHHhhcCCCCCC
Q 019380 83 LCMNIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 83 ~C~k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
.|++.|...+.|..|+++|++++++
T Consensus 99 ~C~~~f~~~~~L~~H~~~H~~~k~~ 123 (124)
T 1ubd_C 99 GCNKKFAQSTNLKSHILTHAKAKNN 123 (124)
T ss_dssp TCCCCCSSTTTTHHHHHHHC-----
T ss_pred CCCCccCCHHHHHHHHHHHcccccC
Confidence 6999999999999999999998875
No 64
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=3e-10 Score=81.83 Aligned_cols=67 Identities=19% Similarity=0.362 Sum_probs=49.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCccccccccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIF 88 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F 88 (342)
.++++||+|+.|++.|..+..|..|+++ |.+.. ..++| .|+.|++.|
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~-------------------~~~~~------------~C~~C~k~f 48 (78)
T 2d9h_A 2 SSGSSGLQCEICGFTCRQKASLNWHQRK--HAETV-------------------AALRF------------PCEFCGKRF 48 (78)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHH--HHHHT-------------------TTCCE------------ECTTTCCEE
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHHHH--hhccC-------------------CCccc------------CCCCCCchh
Confidence 4689999999999999999999999999 65410 01233 357788888
Q ss_pred CChhhHHHHHh-hcCCCCCCC
Q 019380 89 DSPSSLIKHKE-ACSLSAPVP 108 (342)
Q Consensus 89 ~~~~~L~~H~~-~h~~~~~~~ 108 (342)
..++.|..|++ .|.++.+..
T Consensus 49 ~~~~~L~~H~~~~H~~~~~~~ 69 (78)
T 2d9h_A 49 EKPDSVAAHRSKSHPALLLAP 69 (78)
T ss_dssp SSHHHHHHHHHHTSTTTSSCC
T ss_pred CCHHHHHHHHHHhCCCCCCCc
Confidence 88888999985 455555443
No 65
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.92 E-value=6.3e-10 Score=79.00 Aligned_cols=61 Identities=25% Similarity=0.569 Sum_probs=45.5
Q ss_pred CCCCCCCCCCCCCccccc--ccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc
Q 019380 1 MDTEAELPKRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 1 ~~~~~~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
|+...+...+++++|+|+ .|++.|..+..|..|+++ |+++++ .|..|++.|...+.|..|+
T Consensus 6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHI 69 (73)
T ss_dssp --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHh--hCCCCCeECCCCCchhCCHHHHHHHH
Confidence 345566677899999997 699999999999999999 776665 6666666666655555553
No 66
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.90 E-value=1.5e-09 Score=72.44 Aligned_cols=48 Identities=33% Similarity=0.499 Sum_probs=42.6
Q ss_pred CCCCCCCcccccccccccCCHHHHHHHHh-hhccCCCCC-ccccCccccCCh
Q 019380 7 LPKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVCQKLSKSF 56 (342)
Q Consensus 7 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~H~~~~~-~C~~C~~~f~~~ 56 (342)
.+.++++||+|+.|++.|..+..|..|++ + |+++++ .|..|++.|.++
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~k~~~C~~C~k~F~~~ 54 (54)
T 2eps_A 5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQV--HTSERPHKCQVWVSGPSSG 54 (54)
T ss_dssp CCCCSSCCEECSSSCCEESSHHHHHHHHHHT--SCCCCCCCSSSSCCSSCCC
T ss_pred CCCCCCCCeECCCCCcccCCHHHHHHHHHHh--cCCCCCccCCCCCCCCCCC
Confidence 45678999999999999999999999997 8 888887 999999999763
No 67
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=98.89 E-value=1e-09 Score=73.79 Aligned_cols=56 Identities=25% Similarity=0.486 Sum_probs=43.1
Q ss_pred cccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCChhh
Q 019380 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSS 93 (342)
Q Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~ 93 (342)
||+|+.|++.|.....|..|+++ |+++++ | .|+.|++.|...+.
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~--h~~~~~----------------------~------------~C~~C~~~f~~~~~ 44 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRT--HTDVRP----------------------Y------------HCTYCNFSFKTKGN 44 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH--TSSCCC----------------------E------------ECSSSSCEESSHHH
T ss_pred CCcCCCCcCcCCCHHHHHHHHHh--cCCCCC----------------------c------------cCCCCCchhcCHHH
Confidence 69999999999999999999999 776544 2 24556666777777
Q ss_pred HHHHHhhcCCCC
Q 019380 94 LIKHKEACSLSA 105 (342)
Q Consensus 94 L~~H~~~h~~~~ 105 (342)
|..|+++|++++
T Consensus 45 l~~H~~~h~~~k 56 (57)
T 1bbo_A 45 LTKHMKSKAHSK 56 (57)
T ss_dssp HHHHHHSSSSCC
T ss_pred HHHHHHHhcccC
Confidence 777777776654
No 68
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.86 E-value=2.2e-09 Score=87.83 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=63.9
Q ss_pred ccccCccccCChhhhhhhc----C--CC--------cccCCCCCcccCCc----------------ccc--cccccCChh
Q 019380 45 KCAVCQKLSKSFESLREHL----T--GP--------LSKAHCSGIFSDRG----------------CNL--CMNIFDSPS 92 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~----~--~~--------~~C~~C~k~f~~~~----------------C~~--C~k~F~~~~ 92 (342)
.|..|++.|.+...|..|+ . .+ |.|..|++.|.... |+. |++.|....
T Consensus 27 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~ 106 (155)
T 2rpc_A 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSE 106 (155)
T ss_dssp SCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHH
T ss_pred ccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHH
Confidence 9999999999999999997 1 12 78999999998752 988 999999999
Q ss_pred hHHHHHhhcCCCCCCCCcc--cccccc
Q 019380 93 SLIKHKEACSLSAPVPFKI--SGAIDE 117 (342)
Q Consensus 93 ~L~~H~~~h~~~~~~~~~~--c~~~~~ 117 (342)
.|..|+++|++++++.|+. |++...
T Consensus 107 ~L~~H~~~h~~~~~~~C~~~~C~k~f~ 133 (155)
T 2rpc_A 107 NLKIHKRTHTGEKPFKCEFEGCDRRFA 133 (155)
T ss_dssp HHHHHHTTTCSSCSBCCSSTTCCCCBS
T ss_pred HHHHHHHhhCCCCCccCCCCCCCCccC
Confidence 9999999999999999996 876644
No 69
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.86 E-value=1.5e-09 Score=77.89 Aligned_cols=62 Identities=16% Similarity=0.294 Sum_probs=45.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCccccccccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIF 88 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F 88 (342)
.++++||+|+.|++.|..+..|..|++.+ |+++. ++| .|+.|++.|
T Consensus 10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~-h~~~~---------------------~~~------------~C~~C~~~f 55 (77)
T 2ct1_A 10 HSGEKPYECYICHARFTQSGTMKMHILQK-HTENV---------------------AKF------------HCPHCDTVI 55 (77)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHHH-SSSSC---------------------SSE------------ECSSSSCEE
T ss_pred cCCCCCeECCCcCchhCCHHHHHHHHHHh-cCCCC---------------------Ccc------------CCCCCCCcc
Confidence 46788999999999999999999998731 65431 123 356677778
Q ss_pred CChhhHHHHHhhcCCC
Q 019380 89 DSPSSLIKHKEACSLS 104 (342)
Q Consensus 89 ~~~~~L~~H~~~h~~~ 104 (342)
.....|..|++.+++.
T Consensus 56 ~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 56 ARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SSHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHhCCC
Confidence 8888888888876644
No 70
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.86 E-value=2.2e-09 Score=80.94 Aligned_cols=73 Identities=16% Similarity=0.275 Sum_probs=56.7
Q ss_pred cccCCHHHHHHHHhhhccCCCCC-ccccCcccc-CChhhhhhhc----CCCcccCCCCCcccCCcccccccccCChhhHH
Q 019380 22 KQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS-KSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLI 95 (342)
Q Consensus 22 k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f-~~~~~l~~H~----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~ 95 (342)
..|.....|..|++. |.++++ .|..|++.| .+...|..|+ .++| .|.+|++.|..++.|+
T Consensus 14 ~~~~~~~~~~~~~~~--~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~------------~C~~Cgk~F~~~~~L~ 79 (96)
T 2ctd_A 14 PVYAAGSLEEQWYLE--IVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMF------------TCHHCGKQLRSLAGMK 79 (96)
T ss_dssp CSSCTTCHHHHHHHH--HHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCC------------CCSSSCCCCSSHHHHH
T ss_pred CCCCCchHHHHHHHH--hcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCe------------ECCCCCCeeCCHHHHH
Confidence 356677778888888 766766 899999999 8888888887 2333 4688999999999999
Q ss_pred HH-HhhcCCCCCCC
Q 019380 96 KH-KEACSLSAPVP 108 (342)
Q Consensus 96 ~H-~~~h~~~~~~~ 108 (342)
.| +++|.++..+.
T Consensus 80 ~H~~~~H~~~p~~~ 93 (96)
T 2ctd_A 80 YHVMANHNSLPSGP 93 (96)
T ss_dssp HHHHHHTCCCSSCS
T ss_pred HHhHHhcCCCCCCC
Confidence 99 88887654433
No 71
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.82 E-value=1.4e-09 Score=81.95 Aligned_cols=50 Identities=22% Similarity=0.409 Sum_probs=46.9
Q ss_pred CCCccccccccccc-CCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhh-c
Q 019380 11 STARHKCVACYKQF-KRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH-L 63 (342)
Q Consensus 11 ~~~~~~C~~C~k~f-~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H-~ 63 (342)
++++|+|+.|++.| .++..|..|+++ | ++++ .|.+|++.|.....|..| +
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~--h-~~k~~~C~~Cgk~F~~~~~L~~H~~ 83 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMEN--C-KQEMFTCHHCGKQLRSLAGMKYHVM 83 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHH--H-CCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHHH--H-CCCCeECCCCCCeeCCHHHHHHHhH
Confidence 57899999999999 999999999999 8 7777 999999999999999999 5
No 72
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.81 E-value=2.4e-09 Score=82.35 Aligned_cols=66 Identities=21% Similarity=0.322 Sum_probs=58.2
Q ss_pred cCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
|+++++ .| .|++.|.+...|..|+ .++| .|+.|++.|.....|..|++.|++++++.|+.|
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 71 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY------------GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSE------------ECTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCc------------cCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence 888888 99 9999999999999998 2344 468899999999999999999999999999999
Q ss_pred ccccc
Q 019380 113 GAIDE 117 (342)
Q Consensus 113 ~~~~~ 117 (342)
++...
T Consensus 72 ~~~f~ 76 (110)
T 2csh_A 72 AKRFM 76 (110)
T ss_dssp CCEES
T ss_pred cchhc
Confidence 87654
No 73
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=98.81 E-value=4e-09 Score=78.84 Aligned_cols=67 Identities=28% Similarity=0.428 Sum_probs=57.4
Q ss_pred cCCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
+.++++ .|..|++.|.+...|..|+ .++| .|+.|++.|.....|..|++.|++++++.|+.|
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 70 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY------------KCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSE------------ECSSSCCEESSHHHHHHHHHHSCCCCCEECSSS
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCE------------eCCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence 445566 9999999999999999998 2333 468899999999999999999999999999999
Q ss_pred ccccc
Q 019380 113 GAIDE 117 (342)
Q Consensus 113 ~~~~~ 117 (342)
++...
T Consensus 71 ~~~f~ 75 (96)
T 2dmd_A 71 PYASR 75 (96)
T ss_dssp SCEES
T ss_pred CCccC
Confidence 87644
No 74
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.80 E-value=2.7e-09 Score=75.10 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=34.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|.....|..|+++|++++++.|+.|++...
T Consensus 11 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~ 48 (70)
T 1x5w_A 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTK 48 (70)
T ss_dssp ECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEES
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccC
Confidence 47889999999999999999999999999999987654
No 75
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.80 E-value=3.1e-09 Score=76.47 Aligned_cols=64 Identities=22% Similarity=0.320 Sum_probs=54.1
Q ss_pred CCCCC-cccc--CccccCChhhhhhhc------CCCcccCCCCCcccCCcccc--cccccCChhhHHHHHhhcCCCCCCC
Q 019380 40 SVHQP-KCAV--CQKLSKSFESLREHL------TGPLSKAHCSGIFSDRGCNL--CMNIFDSPSSLIKHKEACSLSAPVP 108 (342)
Q Consensus 40 ~~~~~-~C~~--C~~~f~~~~~l~~H~------~~~~~C~~C~k~f~~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~~~ 108 (342)
++.++ .|.. |++.|.+...|..|+ .++|. |+. |++.|..+..|..|+++|++++++.
T Consensus 3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~------------C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~ 70 (79)
T 2dlk_A 3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS------------CPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70 (79)
T ss_dssp SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEE------------CSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeE------------CCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence 45555 6665 999999999999997 23444 566 9999999999999999999999999
Q ss_pred Ccccccc
Q 019380 109 FKISGAI 115 (342)
Q Consensus 109 ~~~c~~~ 115 (342)
|+.|++.
T Consensus 71 C~~C~k~ 77 (79)
T 2dlk_A 71 CEFSGPS 77 (79)
T ss_dssp CCSSSCC
T ss_pred CCCCCCC
Confidence 9999875
No 76
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.79 E-value=9.6e-10 Score=79.00 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=31.8
Q ss_pred cccccccccCChhhHHHHHh-hcCCC-CCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKE-ACSLS-APVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~-~h~~~-~~~~~~~c~~~~~ 117 (342)
.|+.|++.|.....|..|++ .|.++ +++.|+.|++...
T Consensus 17 ~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~ 56 (77)
T 2ct1_A 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA 56 (77)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEES
T ss_pred ECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccC
Confidence 35789999999999999997 56664 8999999997654
No 77
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=2e-09 Score=81.34 Aligned_cols=53 Identities=25% Similarity=0.369 Sum_probs=48.9
Q ss_pred CCCCCcccccccccccC-CHHHHHHHHhhhccCC-CCC-ccccCccccCChhhhhhhc
Q 019380 9 KRSTARHKCVACYKQFK-RKDHLIEHMKISYHSV-HQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~-~~~~L~~H~~~~~H~~-~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
.+++++|+|+.|++.|. .+..|..|+++ |++ +++ .|..|++.|.+...|..|+
T Consensus 19 h~~~~~~~C~~C~k~f~~~~~~L~~H~~~--h~~~~~~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 19 IHERGEAVCPTCNVVTRKTLVGLKKHMEV--CQKLQDALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp TTTTSCCCCTTTCCCCSSCSHHHHHHHHH--HHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred hccCCCcCCCCCCCChhhhHHHHHHHHHH--HcCCCCCEECCCCCCccCCHHHHHHHH
Confidence 35789999999999999 99999999999 776 666 9999999999999999998
No 78
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.76 E-value=3.1e-09 Score=80.94 Aligned_cols=38 Identities=11% Similarity=0.138 Sum_probs=33.2
Q ss_pred cccccccccCChhhHHHHHh-hc---CCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKE-AC---SLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~-~h---~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|..++.|..|++ .| .+++|+.|++|++...
T Consensus 20 ~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~ 61 (102)
T 2ghf_A 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61 (102)
T ss_dssp ECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEES
T ss_pred CCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccC
Confidence 46889999999999999998 58 5789999999998755
No 79
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=98.75 E-value=1.1e-08 Score=77.83 Aligned_cols=65 Identities=22% Similarity=0.328 Sum_probs=55.7
Q ss_pred CCCC-ccccCccccCChhhhhhhc---C--CCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCccccc
Q 019380 41 VHQP-KCAVCQKLSKSFESLREHL---T--GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGA 114 (342)
Q Consensus 41 ~~~~-~C~~C~~~f~~~~~l~~H~---~--~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~ 114 (342)
.+++ .|..|++.|.....|..|+ . ++| .|+.|++.|.....|..|++.|++++++.|+.|++
T Consensus 14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 81 (106)
T 2ee8_A 14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPY------------TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGK 81 (106)
T ss_dssp CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCC------------BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCC
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCc------------CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCC
Confidence 3444 9999999999999999998 2 344 46889999999999999999999999999999987
Q ss_pred ccc
Q 019380 115 IDE 117 (342)
Q Consensus 115 ~~~ 117 (342)
...
T Consensus 82 ~f~ 84 (106)
T 2ee8_A 82 GFC 84 (106)
T ss_dssp CCS
T ss_pred ccc
Confidence 644
No 80
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.73 E-value=9.1e-09 Score=66.69 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=38.9
Q ss_pred CCCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCcc
Q 019380 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQK 51 (342)
Q Consensus 7 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~ 51 (342)
.+.+++++|+|+.|++.|..+..|..|+++ |+++++ .|.+|++
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C~k 48 (48)
T 2epr_A 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLS--HSGEKPYSSGPSSG 48 (48)
T ss_dssp SCCCCCCSEEETTTTEEESSHHHHHHHGGG--SCSCCCCCSCCCCC
T ss_pred CCCCCCcCeeCCCCCcccCCHHHHHHHHHh--cCCCCCccCCCCCC
Confidence 355789999999999999999999999999 988887 9999985
No 81
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=98.73 E-value=8.1e-09 Score=76.97 Aligned_cols=66 Identities=21% Similarity=0.328 Sum_probs=56.2
Q ss_pred CCCCC-ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCC--CCCCCcc
Q 019380 40 SVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS--APVPFKI 111 (342)
Q Consensus 40 ~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~--~~~~~~~ 111 (342)
+++++ .|..|++.|.+...|..|+ .++| .|+.|++.|.....|..|++.|+++ +++.|+.
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~ 70 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPY------------SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSE------------ECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCC------------cCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence 45555 9999999999999999998 2334 4688999999999999999999997 8999999
Q ss_pred cccccc
Q 019380 112 SGAIDE 117 (342)
Q Consensus 112 c~~~~~ 117 (342)
|++...
T Consensus 71 C~~~f~ 76 (95)
T 2yt9_A 71 CGKGFS 76 (95)
T ss_dssp SCCCBS
T ss_pred ccchhC
Confidence 987643
No 82
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.72 E-value=3.2e-09 Score=75.20 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=34.4
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|.....|..|++.|.+++++.|+.|++...
T Consensus 16 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp ECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred cCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 36889999999999999999999999999999987654
No 83
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=98.72 E-value=2.2e-09 Score=82.19 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=59.2
Q ss_pred HhhhccCCCCC-ccccCccccCChhhhhhhc---CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 34 MKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 34 ~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
+++ |+++++ .|..|++.|.....|..|+ .++| .|+.|++.|.....|..|++ |.+++++.|
T Consensus 8 ~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~------------~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C 72 (107)
T 1wjp_A 8 ASP--VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA------------VCPYCSLRFFSPELKQEHES-KCEYKKLTC 72 (107)
T ss_dssp CCC--CCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSB------------CCTTTCCCBSSHHHHHHHHH-HCSTGGGEE
T ss_pred Ccc--cCCCcCeECCCCCCccCCHHHHHHHHHHCCCCc------------cCCCCCCccCCHHHHHHHHH-cCCCCCccC
Confidence 455 888877 9999999999999999998 3444 46889999999999999996 999999999
Q ss_pred cccccccc
Q 019380 110 KISGAIDE 117 (342)
Q Consensus 110 ~~c~~~~~ 117 (342)
+.|++...
T Consensus 73 ~~C~~~f~ 80 (107)
T 1wjp_A 73 LECMRTFK 80 (107)
T ss_dssp GGGTEECS
T ss_pred ccccchhC
Confidence 99987644
No 84
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=98.69 E-value=1.6e-08 Score=71.35 Aligned_cols=57 Identities=23% Similarity=0.524 Sum_probs=45.9
Q ss_pred CCCCCCCCCcccccc--cccccCCHHHHHHHHhhhccCCCCC-cccc--CccccCChhhhhhhc
Q 019380 5 AELPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL 63 (342)
Q Consensus 5 ~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~ 63 (342)
....++..++|.|+. |++.|..+..|..|+++ |+++++ .|.. |++.|.....|..|+
T Consensus 8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT--HTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHH--HSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred CCCCccccCceeCCCCCCccccCCHHHHHHHHHh--cCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 445567889999988 99999999999999999 887776 7743 777777777666664
No 85
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.67 E-value=1.3e-08 Score=64.92 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=37.3
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQ 50 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~ 50 (342)
..++++||+|+.|++.|..+..|..|+++ |+++++ .|+.||
T Consensus 4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~~~C~~cg 45 (45)
T 2epq_A 4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRS--HDGSVGKSGPSSG 45 (45)
T ss_dssp CCSSCCSSEETTTTEECSCHHHHHHHHHH--HSCCCCCCCCCCC
T ss_pred CcCCCCCCcCCCCCcccCCHHHHHHHHHH--ccCCCCCCCcCCC
Confidence 45689999999999999999999999999 888887 899885
No 86
>2kfn_A Klenow fragment of DNA polymerase I; complex (polymerase/DNA), exonuclease, transferase, transferase/DNA complex; HET: US1; 2.03A {Escherichia coli} SCOP: c.55.3.5 e.8.1.1 PDB: 1d9f_A* 1d9d_A* 1krp_A* 1ksp_A* 1qsl_A* 1kfs_A* 2kfz_A* 2kzm_A* 2kzz_A* 1dpi_A* 1kfd_A* 1kln_A* 1d8y_A*
Probab=98.67 E-value=6.6e-08 Score=96.49 Aligned_cols=145 Identities=14% Similarity=0.154 Sum_probs=99.9
Q ss_pred cceecccccccccCCCcccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHHHhcC
Q 019380 125 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNG 204 (342)
Q Consensus 125 ~~v~~D~Ettg~~~~~~~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~~~~l~~~ 204 (342)
.++++|+||||.+.... ++ ..+.++..+|+..| + |... ..+ | +.+++++.++++.|.+|+
T Consensus 27 ~~va~DtEttgl~~~~~-~i-v~I~~~~~~g~~~y---i-p~~~-----~~~-~-----~~~~l~~~~vl~~L~~~L--- 86 (605)
T 2kfn_A 27 PVFAFDTETDSLDNISA-NL-VGLSFAIEPGVAAY---I-PVAH-----DYL-D-----APDQISRERALELLKPLL--- 86 (605)
T ss_dssp SSEEEEEEESCSCTTTC-CE-EEEEEEEETTEEEE---E-ECCC-----CST-T-----CCCCCCHHHHHHHHHHHH---
T ss_pred CeEEEEEecCCCCcccC-ce-EEEEEEEcCCcEEE---E-eccc-----ccc-c-----cccccCHHHHHHHHHHHH---
Confidence 67999999999864211 12 23333323444332 3 1111 001 2 234567899999999999
Q ss_pred CCccccccCCCCCeEEEeeCchhhhhhcc---ccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCC-------C
Q 019380 205 ESTGRLMLDDGKARLLVGHGLEHDLDSLR---MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQ-------S 274 (342)
Q Consensus 205 ~~~~~~~~~~~~~~~lvgh~~~~D~~~l~---~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~-------~ 274 (342)
++.+.++|+||+.||+.+|. +..+ ..++||+..+..+.|...+++|+.|+..|+|+... .
T Consensus 87 ---------~d~~i~kV~hnak~D~~~L~~~Gi~l~-~~~~DT~laayLL~p~~~~~~L~~La~~~Lg~~~i~~~~~~gK 156 (605)
T 2kfn_A 87 ---------EDEKALKVGQNLKYDRGILANYGIELR-GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 156 (605)
T ss_dssp ---------TCTTSCEEESSHHHHHHHHHTTTCCCC-CEEEEHHHHHHHHCTTSSCCSHHHHHHHHSCCCCCCHHHHHCS
T ss_pred ---------cCCCCeEEEECcHHHHHHHHHCCCCCC-CccccHHHHHHHhCCCCCCCCHHHHHHHhcCCCcccHHHHhCC
Confidence 33445899999999999997 2222 35899999999998877789999999999876531 0
Q ss_pred -----C--C-------CCcHHHHHHHHHHHHHHHhhhhh
Q 019380 275 -----G--V-------HDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 275 -----~--~-------H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
. . |.|..||.++++||..+..+..+
T Consensus 157 g~~~~~~~~~~le~~~~yAa~Da~~~~~L~~~L~~~L~~ 195 (605)
T 2kfn_A 157 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 195 (605)
T ss_dssp STTCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 45889999999999999876543
No 87
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=98.65 E-value=5.8e-09 Score=72.33 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=33.2
Q ss_pred cccccccccCChhhHHHHHhh-c-CCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEA-C-SLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~-h-~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|...+.|..|++. | .+++++.|+.|++...
T Consensus 12 ~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~ 51 (66)
T 2drp_A 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFT 51 (66)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEES
T ss_pred ECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccC
Confidence 368899999999999999998 6 5899999999987654
No 88
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=98.64 E-value=1e-08 Score=74.05 Aligned_cols=52 Identities=33% Similarity=0.545 Sum_probs=48.4
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
+++++|+|+.|++.|..+..|..|+++ |+++++ .|..|++.|.+.+.|..|+
T Consensus 25 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 77 (82)
T 2kmk_A 25 SDTRPYPCQYCGKRFHQKSDMKKHTFI--HTGEKPHKCQVCGKAFSQSSNLITHS 77 (82)
T ss_dssp HTCCCEECSSSCCEESSHHHHHHHHHH--HHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred CCCCCeeCCcCChhhCCHHHHHHHHHH--hcCCCCCcCCCcchhhCChHHHHHHH
Confidence 367899999999999999999999999 888877 9999999999999999996
No 89
>4hec_A Putative uncharacterized protein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, unknown; 1.80A {Mycobacterium tuberculosis}
Probab=98.63 E-value=1.7e-07 Score=78.96 Aligned_cols=153 Identities=16% Similarity=0.154 Sum_probs=91.3
Q ss_pred cceecccccccccCCCcccccceEEeecCCCCeEEeeecCC-CCCcccccc--ccCCCCHhhhcCCCChHHHHHHHHHHH
Q 019380 125 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQP-QLPVTNYRY--EVTGLTEEDIKNAMPLKEVKDKILEIL 201 (342)
Q Consensus 125 ~~v~~D~Ettg~~~~~~~~il~~v~vv~~~~~~~~~~lv~p-~~~i~~~~~--~i~GIt~e~l~~~~~~~~v~~~~~~~l 201 (342)
.-+.+|||+|+.+. .+++ ..+.+|..+|...|...... ...+.++.. -+.++.........++.++..+|.+||
T Consensus 23 ~r~FlDTEFt~d~~--~~eL-ISIGlV~EdGrEFYav~~d~d~~~~~~wVr~~Vlp~L~~~~~~~~~s~~~i~~~L~~FL 99 (190)
T 4hec_A 23 VRYFYDTEFIEDGH--TIEL-ISIGVVAEDGREYYAVSTEFDPERAGSWVRTHVLPKLPPPASQLWRSRQQIRLDLEEFL 99 (190)
T ss_dssp EEEEEEEEEEECSS--CEEE-EEEEEEETTSCEEEEEETTSCGGGCCHHHHHHTGGGSCCTTSTTEECHHHHHHHHHHHT
T ss_pred eEEEEeeeecCCCC--CCCE-EEEEEEcCCCCEEEEEecCCChhhCcHHHHhccccCCCCCcccccCCHHHHHHHHHHHH
Confidence 34789999998543 3445 77788888998755443221 122233322 135555544555678999999999999
Q ss_pred hcCCCccccccCCCCCeEEEeeCchhhhhhccccCCCcceeeccccccccccCCCCccHHHHHHHHhCCc---C-CCCCC
Q 019380 202 NNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYD---I-QSGVH 277 (342)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~---~-~~~~H 277 (342)
... +.....|++|+..+|..+|.--+.. +.+. .+.+ +. ...-|..+.... |.. . ..+.|
T Consensus 100 ~~~---------~~~~~eLwa~~~~yD~~~L~ql~g~--m~~l---P~~~-p~-~~~dlr~~~~~~-g~~~lp~~~~~~H 162 (190)
T 4hec_A 100 RID---------GTDSIELWAWVGAYDHVALCQLWGP--MTAL---PPTV-PR-FTRELRQLWEDR-GCPRMPPRPRDVH 162 (190)
T ss_dssp TTT---------SSCEEEEEESSCHHHHHHHHTTTSS--GGGS---CTTS-CS-SCEEHHHHHHHT-TCCCCCC-----C
T ss_pred Hhc---------CCCCCEEEEecccccHHHHHHHhcc--cccC---Cccc-ch-hhHHHHHHHHHc-CCCCCCCCCCCCc
Confidence 321 1133469999999999998733221 1111 1100 10 123466666654 432 1 12279
Q ss_pred CcHHHHHHHHHHHHHHHhhh
Q 019380 278 DPYEDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 278 ~A~~Da~~t~~l~~~~~~~~ 297 (342)
+||.||+..+..|+.+....
T Consensus 163 ~AL~DAR~n~~~~~~~~~~~ 182 (190)
T 4hec_A 163 DALVDARDQLRRFRLITSTD 182 (190)
T ss_dssp CHHHHHHHHHHHHHHHHC--
T ss_pred CcHHHHHHHHHHHHHHhCcc
Confidence 99999999999999887653
No 90
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=2.9e-08 Score=63.54 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|.+|
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2elz_A 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRV--HMGEKTSGPSSG 46 (46)
T ss_dssp CCCCSSCBCSSSCCBCSSHHHHHHHGGG--GGSCCCCCSCCC
T ss_pred CCCCCCeeCcccCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88877
No 91
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=3.2e-08 Score=63.29 Aligned_cols=39 Identities=28% Similarity=0.443 Sum_probs=35.8
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSCCSSCBCTTTCCBCSSHHHHHHHGGG--TSCCCCCSCCCC
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHhhh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 92
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=3.1e-08 Score=63.38 Aligned_cols=39 Identities=31% Similarity=0.423 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|.+|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytq_A 7 GAGEKPYGCSECGKAFSSKSYLIIHMRT--HSGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSCBCSSSCCBCSCHHHHHHHHTT--TCCSCSSCCCCC
T ss_pred cCCCCCcCCCccChhhCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 93
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=3.2e-08 Score=63.23 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFSRAPCLLKHERL--HSGEKPSGPSSG 46 (46)
T ss_dssp SSCCCCCCBTTTTBCCSCHHHHHHHHHH--CCSSSCCCCCCC
T ss_pred CCCCCCeECCCCCCccCchHHHHHHHHh--cCCCCCCCCCCC
Confidence 4688999999999999999999999999 988887 88876
No 94
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=98.61 E-value=1.5e-08 Score=74.66 Aligned_cols=52 Identities=25% Similarity=0.649 Sum_probs=48.4
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
+++++|.|+.|++.|.++..|..|+++ |+++++ .|..|++.|.+.+.|..|+
T Consensus 30 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 82 (90)
T 1a1h_A 30 TGQKPFQCRICMRNFSRSDHLTTHIRT--HTGEKPFACDICGRKFARSDERKRHT 82 (90)
T ss_dssp HCCCCEECTTTCCEESCHHHHHHHHHH--HHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred CCCCCccCCCCCcccCCHHHHHHHHHH--cCCCCCccCCCCCchhCCHHHHHHHH
Confidence 357899999999999999999999999 888877 9999999999999999997
No 95
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.61 E-value=3.1e-08 Score=63.34 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFSQASSLRLHQNV--HVGEKPSGPSSG 46 (46)
T ss_dssp SCCCCCCCCSSSCCCCSSHHHHHHHGGG--GSSSSCSCSSCC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHH--cCCCCCcCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 96
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.61 E-value=3.1e-08 Score=63.38 Aligned_cols=39 Identities=26% Similarity=0.512 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emk_A 7 GTGEKPYECKECGKAFSQTTHLIQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSSCSCBCSSSCCBCSCHHHHHHHHHH--HSSCCCSSCCCC
T ss_pred cCCCCceECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 97
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.61 E-value=2.8e-08 Score=63.63 Aligned_cols=39 Identities=31% Similarity=0.484 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emf_A 7 GTGGKHFECTECGKAFTRKSTLSMHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSSSCCEECSSSCCEESCHHHHHHHGGG--TSCSSCSCCCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 98
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=2.8e-08 Score=62.92 Aligned_cols=39 Identities=23% Similarity=0.414 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 44 (44)
T 2emx_A 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQT--HAEEKPSGPSSG 44 (44)
T ss_dssp CSSCCCEECSSSSCEESSHHHHHHHHHH--HTSSCSCSCCCC
T ss_pred cCCCcCccCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 99
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.3e-08 Score=63.14 Aligned_cols=39 Identities=28% Similarity=0.482 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSFNSQLIVHQRI--HTGENPSGPSSG 46 (46)
T ss_dssp CCCCCSCBCTTTCCBCSSHHHHHHHHTT--TTTSCCSCCCCC
T ss_pred cCCCCCeeCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 100
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.5e-08 Score=63.12 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epz_A 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSBCCTTTCCCBSSHHHHHHHHTT--TTTCCCCSSCCC
T ss_pred cCCCCCeECCCCCceeCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4688999999999999999999999999 988887 88876
No 101
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.60 E-value=3e-08 Score=63.37 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRS--HTGVKPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHGGG--SSSCCCSCCTTC
T ss_pred CCCCCceECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 998887 88876
No 102
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=3.1e-08 Score=63.37 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2em7_A 7 GTGEKPYKCEECGKGFICRRDLYTHHMV--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHGGG--GTTCCCSSTTCC
T ss_pred CCCCcCccCCCccchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4688999999999999999999999999 888887 88876
No 103
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.4e-08 Score=63.18 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoq_A 7 GTGEKPFKCDICGKSFCGRSRLNRHSMV--HTAEKPSGPSSG 46 (46)
T ss_dssp SSSSCSCCCSSSCCCCSSHHHHHHHHHH--TTCCCSSSCCCC
T ss_pred CCCCCCcCCCcCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4688999999999999999999999999 988887 88876
No 104
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=2.4e-08 Score=71.62 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=34.0
Q ss_pred cccccccccCChhhHHHHHhhcCC---CCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSL---SAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~---~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|.....|..|+++|++ ++++.|+.|++...
T Consensus 9 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~ 49 (78)
T 2d9h_A 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFE 49 (78)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEES
T ss_pred ECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhC
Confidence 368899999999999999999996 89999999998755
No 105
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.1e-08 Score=63.34 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFSHRQSLSVHQRI--HSGKKPSGPSSG 46 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHGG--GSSCCCSCSSCC
T ss_pred cCCCCCeeCCCcCCccCCHHHHHHHHHH--hcCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 106
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=3.6e-08 Score=63.01 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=35.8
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYTNSQCYSHQRS--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHH--SCCSSCCSSCCC
T ss_pred CCCCCCcCCCCCCCcCCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 998887 88877
No 107
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.1e-08 Score=63.32 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ene_A 7 GTGEKPYKCNECGKVFRHNSYLSRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHTT--TCCCCCCSCCCC
T ss_pred CCCCCCeECCCCCchhCChHHHHHHHhh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88877
No 108
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.5e-08 Score=63.05 Aligned_cols=39 Identities=28% Similarity=0.463 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFTQNSHLANHQRI--HTGVKPSGPSSG 46 (46)
T ss_dssp CCCCCSSEETTTTEECSSHHHHHHHHGG--GSCCCSCSSCCC
T ss_pred CCCCCCeECCCcChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88877
No 109
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3.2e-08 Score=63.27 Aligned_cols=39 Identities=31% Similarity=0.490 Sum_probs=35.8
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFRRNSHLARHQLI--HTGEKPSGPSSG 46 (46)
T ss_dssp TTCCCCEECTTTCCEESSHHHHHHHHTT--TCCCCCSCCSCC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 110
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3.3e-08 Score=63.18 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFTKKSQLHVHQQI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHT--TSSCCSCCSCCC
T ss_pred CCCCcCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 998887 88876
No 111
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.59 E-value=3.8e-08 Score=62.98 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRM--HTREKPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSSCCSCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 112
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3.7e-08 Score=62.95 Aligned_cols=39 Identities=26% Similarity=0.439 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQTSKLARHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSCCTTCCTTTCCCCSSHHHHHHHHTT--TTTCSCCCSCCC
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88877
No 113
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3e-08 Score=63.35 Aligned_cols=39 Identities=33% Similarity=0.583 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emm_A 7 GTGERPHKCNECGKSFIQSAHLIQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHH--HSCCCTTSSSCC
T ss_pred cCCCCCeeCCCCChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88877
No 114
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3.9e-08 Score=62.81 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eov_A 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKC--HTGERHSGPSSG 46 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHHHH--HSCCSSCCSCCC
T ss_pred CCCCCCccCCccChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 88876
No 115
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.58 E-value=3e-08 Score=63.38 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emy_A 7 GTGENPYECHECGKAFSRKYQLISHQRT--HAGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHH--HTTSCCSCSSCC
T ss_pred CCCCcCcCCCCCCcccCcHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 116
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.58 E-value=3.3e-08 Score=63.19 Aligned_cols=39 Identities=26% Similarity=0.346 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|.+|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ysp_A 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKV--HTGERPSGPSSG 46 (46)
T ss_dssp CSSCCSEEETTTTEEESCHHHHHHHHTT--SCSCCSSCCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHh--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 998887 88877
No 117
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=3.9e-08 Score=62.90 Aligned_cols=39 Identities=33% Similarity=0.563 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFTLKSHLNQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSCSEECSSSCCEESSHHHHHHHHTT--TSCSCCSSCCCC
T ss_pred CCCCCCeECCcCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4688999999999999999999999999 988887 88877
No 118
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=98.57 E-value=1.4e-08 Score=80.31 Aligned_cols=51 Identities=25% Similarity=0.522 Sum_probs=46.5
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~ 63 (342)
++++||+|+.|++.|..+..|..|+++ | ...+.|..|++.|...+.|..|+
T Consensus 70 ~~~~~~~C~~C~k~f~~~~~l~~H~~~--H-~~~~~C~~C~k~f~~~~~l~~H~ 120 (129)
T 2wbt_A 70 KAISQFVCPLCLMPFSSSVSLKQHIRY--T-EHTKVCPVCKKEFTSTDSALDHV 120 (129)
T ss_dssp HHHCSEECTTTCCEESSHHHHHHHHHH--T-CCCCBCTTTCCBCSSHHHHHHHH
T ss_pred CCCCCeECCCCCcccCCHhHHHHHHHH--C-CCCCCCCCCCcccCCHHHHHHHH
Confidence 467899999999999999999999999 8 33449999999999999999997
No 119
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=3.1e-08 Score=63.44 Aligned_cols=39 Identities=21% Similarity=0.407 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytm_A 7 GTGEKPYKCMECGKAFGDNSSCTQHQRL--HTGQRPSGPSSG 46 (46)
T ss_dssp CSSCCSSSBTTTTBCCSSHHHHHHHHHH--HHSCCCCCCCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 88876
No 120
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=4e-08 Score=62.80 Aligned_cols=39 Identities=28% Similarity=0.479 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ytj_A 7 GTGEKPYICAECGKAFTIRSNLIKHQKI--HTKQKPSGPSSG 46 (46)
T ss_dssp TSSCCSEECSSSCCEESSHHHHHHHHHH--TSCCCCSSCSCC
T ss_pred CCCCcCeECCCCChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 121
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.57 E-value=4.1e-08 Score=62.70 Aligned_cols=39 Identities=23% Similarity=0.437 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em9_A 7 GTGEKPYNCKECGKSFRWASCLLKHQRV--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHGGG--GTSCCCCSTTCC
T ss_pred CCCCcCeECCccccccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88877
No 122
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=3.6e-08 Score=63.05 Aligned_cols=39 Identities=33% Similarity=0.508 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFHRHTHLNEHRRI--HTGYRPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHH--HTCCCSSCSSCC
T ss_pred cCCCcCeECCCCCCeeCChHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 123
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.57 E-value=3.7e-08 Score=62.95 Aligned_cols=39 Identities=33% Similarity=0.520 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ema_A 7 GTGEKRYKCNECGKVFSRNSQLSQHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CTTSCCEECSSSCCEESSHHHHHHHHTG--GGCCCCCSSSCC
T ss_pred CCCCcCcCCCCCcchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 124
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.57 E-value=4.3e-08 Score=62.63 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCYISALRIHQRV--HMGEKCSGPSSG 46 (46)
T ss_dssp CCCCSSEECTTTCCEESSHHHHHHHHTT--TCCSCSSCCSCC
T ss_pred CCCCCCeECCCcCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 125
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=5e-08 Score=62.57 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHh-hhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|++ + |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~--H~~~k~~~C~~C 47 (47)
T 2epx_A 7 GTGKKPYECIECGKAFIQNTSLIRHWRYY--HTGEKPSGPSSG 47 (47)
T ss_dssp CCCCCSBCCSSSCCCBSSHHHHHHHHTTT--TTTSCSSSCCCC
T ss_pred cCCCCCEECCccCchhCChHHHHHHhHhh--cCCCCCCCCCCC
Confidence 468999999999999999999999999 8 988887 88876
No 126
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=3.6e-08 Score=63.04 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~c 46 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFTQNSHLTNHWRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSSSCSEECSSSCCEESSHHHHHHHHHH--HSSSSCSSCCCC
T ss_pred CCCCCCEeCCcCCCccCCHHHHHHHHHH--HCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 127
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=4.4e-08 Score=62.55 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGLSAELVRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp TCCCCSEECSSSCCEESSHHHHHHHHGG--GCCCSCCSSCCC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4688999999999999999999999999 888887 88877
No 128
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.57 E-value=3.5e-08 Score=72.48 Aligned_cols=57 Identities=21% Similarity=0.323 Sum_probs=44.3
Q ss_pred cCCCCC-ccccCccccCChhhhhhhc---CCCcccCCCCCcccCCcccccccccCChhhHHHHHh-hcCCCC
Q 019380 39 HSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE-ACSLSA 105 (342)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~-~h~~~~ 105 (342)
++..++ .|.+|++.|.+...|.+|+ .+..++ .|+.|+++|..++.|.+|++ .|.+++
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~----------~C~~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVF----------PCKYCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSE----------ECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCcc----------CCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence 445555 8999999999999999998 332222 46889999999999999974 566553
No 129
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=2.9e-08 Score=63.52 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.+++.|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoo_A 7 GSGERPYGCNECGKNFGRHSHLIEHLKR--HFREKSSGPSSG 46 (46)
T ss_dssp CSCCCCEECSSSCCEESSHHHHHHHHHH--HHSTTSSCCSCC
T ss_pred CCCCCCEEccccCcccCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 88876
No 130
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=3.4e-08 Score=63.10 Aligned_cols=39 Identities=26% Similarity=0.335 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCWKSQLIMHQRT--HVDDKHSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSSHHHHHHHHH--CCSCCCSCCCCC
T ss_pred CCCCCCeeCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 131
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.56 E-value=3.1e-08 Score=63.36 Aligned_cols=39 Identities=31% Similarity=0.490 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ely_A 7 GTGEKPFKCVECGKGFSRRSALNVHHKL--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSBCCSSSCCCBSSTTHHHHHHHH--HSCCSSCSCCCC
T ss_pred CCCCCCcccCccCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 132
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=3.8e-08 Score=62.94 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en6_A 7 GSGEKPYGCNECGKTFSQKSILSAHQRT--HTGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCEEETTTTEEESSHHHHHHHHHH--HSSCCCSSSCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 133
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=4.6e-08 Score=62.51 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=35.7
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ep0_A 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp STTCCSEECSSSCCEESSHHHHHHHHTT--TSSSCCCSCCCC
T ss_pred CCCCCCeeCcccCcccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88876
No 134
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=3.3e-08 Score=63.28 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDLDFHQRV--HTGEKLSGPSSG 46 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHHHH--HHCCCCCCSCCC
T ss_pred CCCCCCeECcccCchhCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 88877
No 135
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=1.8e-08 Score=70.00 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=42.6
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCccc-cccccc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCN-LCMNIF 88 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~-~C~k~F 88 (342)
.+++||+|+.|++.|. +..|..|+++ +++++ | .|+ .|+++|
T Consensus 6 C~~~~~~C~~C~k~f~-~~~L~~H~~~---~~~~p----------------------~------------~C~~~C~k~f 47 (66)
T 2eod_A 6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ---CPRLP----------------------V------------ACPNQCGVGT 47 (66)
T ss_dssp CCCCEEECSSSCCEEE-HHHHHHHHHH---CSSSE----------------------E------------ECTTCCSCCE
T ss_pred CCCCCeeccccCCccC-HHHHHHHHHH---cCCcC----------------------c------------cCCcccCccc
Confidence 5789999999999999 9999999876 22322 2 245 566667
Q ss_pred CChhhHHHHHhhcCCCCC
Q 019380 89 DSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 89 ~~~~~L~~H~~~h~~~~~ 106 (342)
..++.|..|+++|....+
T Consensus 48 ~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 48 VAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp EETTTHHHHHHTTSSSCC
T ss_pred ccHHHHHHHHHhhcccCc
Confidence 777777777777665443
No 136
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=4.5e-08 Score=62.55 Aligned_cols=39 Identities=23% Similarity=0.463 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFTQNSQLHSHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGG--GSCCCCSCCCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 137
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=98.55 E-value=4.3e-08 Score=65.65 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=34.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|...+.|..|+++|++++++.|+.|+....
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 40 (57)
T 1bbo_A 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFK 40 (57)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEES
T ss_pred cCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhc
Confidence 47899999999999999999999999999999987654
No 138
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=3.5e-08 Score=63.09 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emh_A 7 GTGERPYICTVCGKAFTDRSNLIKHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSCCCSEECTTTCCEESSHHHHHHHHHH--HHCSSCSSSCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 88876
No 139
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=4.3e-08 Score=62.64 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2yso_A 7 GSREKSHQCRECGEIFFQYVSLIEHQVL--HMGQKNSGPSSG 46 (46)
T ss_dssp SSCCCCEECTTTCCEESSHHHHHHHHHH--HSCCSCCCTTCC
T ss_pred cCCCCCEEccccChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4688999999999999999999999999 888887 88876
No 140
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=3.5e-08 Score=63.09 Aligned_cols=39 Identities=23% Similarity=0.305 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFSVYSSLTTHQVI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHHHH--HHCCSCCSCCCC
T ss_pred cCCCcCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88876
No 141
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=98.52 E-value=2.3e-08 Score=101.34 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=93.2
Q ss_pred ceecccccccccCCCcccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHHHhcCC
Q 019380 126 AVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGE 205 (342)
Q Consensus 126 ~v~~D~Ettg~~~~~~~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~~~~l~~~~ 205 (342)
+|+||+||||+..... .+ ..+.+++..+...+ ++.| . .+.++++.|..|+
T Consensus 1 ~vv~D~ETtGl~~~~d-~i-~~iqi~~~~~~~~~--~~~p----------------~------~i~~~l~~L~~~l---- 50 (698)
T 1x9m_A 1 MIVSDIEANALLESVT-KF-HCGVIYDYSTAEYV--SYRP----------------S------DFGAYLDALEAEV---- 50 (698)
T ss_dssp CEEEEEEESSCGGGCC-CE-EEEEEEETTTTEEE--EECG----------------G------GHHHHHHHHHHHH----
T ss_pred CEEEEcCCCCcCCCCC-EE-EEEEEEecCCCcEE--EECh----------------H------HHHHHHHHHHHHH----
Confidence 5899999999864322 23 55666554332222 1111 1 2345678888888
Q ss_pred CccccccCCCCCeEEEeeCc-hhhhhhcc----------ccCCCcceeeccccccccccCCCCccHHHHHHHHh------
Q 019380 206 STGRLMLDDGKARLLVGHGL-EHDLDSLR----------MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYL------ 268 (342)
Q Consensus 206 ~~~~~~~~~~~~~~lvgh~~-~~D~~~l~----------~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~------ 268 (342)
. .+.++|+||+ .||+.+|. +..+...++||+.++..+.+...+++|+.|+..||
T Consensus 51 --------~-~~~~kV~HNa~kfD~~~L~~~~~~~~~~Gi~l~~~~~~DTmlaayLL~p~~~~~~L~~La~~~L~~sL~~ 121 (698)
T 1x9m_A 51 --------A-RGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEA 121 (698)
T ss_dssp --------H-TTCCEEESSTTTTHHHHHHHHHHHHHCCCCCCCGGGEEEHHHHHHHHTTTSCCCTTTTSCGGGSCSCCCH
T ss_pred --------h-cCCeEEEcCChHHHHHHHHHhhhhcccCCccCCCCcchhHHHHHHHhCCCCCCCCHHHHHHHHcccchhh
Confidence 2 4578999999 99999995 22332468999999999988777888988888886
Q ss_pred -CCcC-----C-----------CC----------------CCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 269 -GYDI-----Q-----------SG----------------VHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 269 -~~~~-----~-----------~~----------------~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
|... . .+ .|.|..||.+|++||..+..+..+
T Consensus 122 ~g~~lg~~Ki~~~~~~g~~~~~kg~~~~~~~~~~~~~~~~~~YA~~Da~~t~~L~~~L~~~L~~ 185 (698)
T 1x9m_A 122 WGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHY 185 (698)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCTTGGGTSCCHHHHHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred hcccccccccCHHHHhCcccccccccccccCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3211 0 01 356889999999999999987644
No 142
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=6.2e-08 Score=61.89 Aligned_cols=39 Identities=26% Similarity=0.481 Sum_probs=35.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~ 46 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFTDRSNLFTHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHTT--TTTSCCCCTTCC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 88764
No 143
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=98.52 E-value=4.7e-08 Score=65.45 Aligned_cols=47 Identities=30% Similarity=0.470 Sum_probs=40.4
Q ss_pred ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCC
Q 019380 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~ 103 (342)
.|..|++.|.+...|..|+ .++|. |+.|++.|...+.|..|++.|++
T Consensus 6 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 6 ECSYCGKFFRSNYYLNIHLRTHTGEKPYK------------CEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp BCTTTCCBCSCHHHHHHHHHHHHCCCCEE------------CSSSSCEESSHHHHHHHHHHHC-
T ss_pred cCCCCcchhCChHHHHHHHHHcCCCCCcC------------CCCCcchhCCHHHHHHHHHHhcC
Confidence 8999999999999999998 34444 58899999999999999999874
No 144
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=3.9e-08 Score=62.92 Aligned_cols=40 Identities=20% Similarity=0.332 Sum_probs=35.8
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
..++++||+|+.|++.|.++..|..|+++ |+++++ .|..|
T Consensus 6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytt_A 6 SGEGEKPYQCSECGKSFSGSYRLTQHWIT--HTREKPSGPSSG 46 (46)
T ss_dssp SCSCCCTTCCSSSCCCCSSHHHHHHHHTH--HHHCCCCSCCCC
T ss_pred CCCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 34689999999999999999999999999 888877 88876
No 145
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=3.2e-08 Score=63.27 Aligned_cols=39 Identities=23% Similarity=0.485 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYNQRVHLTQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSCCSEECTTTCCEESSSHHHHTTGGG--GSSCCSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88877
No 146
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=3.1e-08 Score=63.32 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=35.4
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQNSHLARHRRV--HTGGKPSGPSSG 46 (46)
T ss_dssp CCCCSSEECSSSCCEESSSHHHHHHTHH--HHSCCCSCSCCC
T ss_pred CCCCCCeECCcCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 88876
No 147
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.49 E-value=8.7e-08 Score=61.23 Aligned_cols=39 Identities=28% Similarity=0.529 Sum_probs=35.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~~ 46 (46)
T 2em2_A 7 GSGEKPFKCKECGKAFRQNIHLASHLRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHH--HCCCCSSCSSCC
T ss_pred CCCCCCEECCcCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 88764
No 148
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=98.49 E-value=5.7e-08 Score=71.25 Aligned_cols=53 Identities=26% Similarity=0.564 Sum_probs=48.6
Q ss_pred CCCCCccccc--ccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc
Q 019380 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 9 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
.+++++|+|+ .|++.|.+...|..|+++ |+++++ .|..|++.|.+.+.|..|+
T Consensus 30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 85 (89)
T 2wbs_A 30 HTGEKPYHCDWDGCGWKFARSDELTRHYRK--HTGHRPFQCQKCDRAFSRSDHLALHM 85 (89)
T ss_dssp SCSSCCEECCSTTTCCEESSHHHHHHHHHH--HHCCCCEECSSSSCEESSHHHHHHHG
T ss_pred cCCCCCcCCCCCCCCCccCCHHHHHHHHHH--cCCCCCccCCCCCcccCCHHHHHHHH
Confidence 3578899997 699999999999999999 888877 9999999999999999996
No 149
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.47 E-value=2.5e-08 Score=68.55 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=42.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhh
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (342)
.++++||+|+.|++.|.....|. ++ |+++++ .|..|++.|....++..+
T Consensus 9 H~~~k~~~C~~C~k~F~~~~~l~---~~--H~~~k~~~C~~C~k~f~~~~~~~~~ 58 (62)
T 1vd4_A 9 STNRASFKCPVCSSTFTDLEANQ---LF--DPMTGTFRCTFCHTEVEEDESAMPK 58 (62)
T ss_dssp CCSSSEEECSSSCCEEEHHHHHH---HE--ETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred cCCCCCccCCCCCchhccHHHhH---hh--cCCCCCEECCCCCCccccCcccccc
Confidence 46899999999999999988886 67 888887 999999999888876654
No 150
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.45 E-value=1.5e-07 Score=58.66 Aligned_cols=37 Identities=22% Similarity=0.539 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|+
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 42 (42)
T 2yte_A 5 SSGEKPYSCAECKETFSDNNRLVQHQKM--HTVKSGPSSG 42 (42)
T ss_dssp SCSCCSCBCTTTCCBCSSHHHHHHHHHH--TSCCSSCCCC
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3688999999999999999999999999 988876 663
No 151
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=98.45 E-value=1.2e-07 Score=71.12 Aligned_cols=52 Identities=29% Similarity=0.600 Sum_probs=47.9
Q ss_pred CCCCccccc--ccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc
Q 019380 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 10 ~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
+++++|+|+ .|++.|.....|..|+++ |+++++ .|..|++.|.....|..|+
T Consensus 41 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 95 (100)
T 2ebt_A 41 TGEKPYKCTWEGCDWRFARSDELTRHYRK--HTGAKPFQCGVCNRSFSRSDHLALHM 95 (100)
T ss_dssp SCCCCEECCSSSCCCEESSHHHHHHHHHH--HTSCCSCBCSSSCCBCSSHHHHHHHH
T ss_pred CCCCCeeCCCCCCCCccCCHHHHHHHHHH--hCCCCCeECCCCcCccCCHHHHHHHH
Confidence 467899996 699999999999999999 888877 9999999999999999996
No 152
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=1.3e-07 Score=59.51 Aligned_cols=38 Identities=13% Similarity=0.227 Sum_probs=34.2
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
..++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 42 (43)
T 2yrm_A 4 GSSGNGAFFCNECDCRFSEEASLKRHTLQ--THSDKSGPSS 42 (43)
T ss_dssp CCSSSCCBCCSSSCCCBSSHHHHHHHHHH--HTCTTCSSSC
T ss_pred CcCCCCCEECCCCCCeeCChHHHHHHHHh--hCCCCCccCC
Confidence 35689999999999999999999999999 888877 775
No 153
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.45 E-value=2.3e-07 Score=64.41 Aligned_cols=43 Identities=26% Similarity=0.425 Sum_probs=35.8
Q ss_pred CCCCCCCCCCcccccc--cccccCCHHHHHHHH-hhhccCCCCC-cccc
Q 019380 4 EAELPKRSTARHKCVA--CYKQFKRKDHLIEHM-KISYHSVHQP-KCAV 48 (342)
Q Consensus 4 ~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~-~~~~H~~~~~-~C~~ 48 (342)
+...--+++|||+|+. |++.|.++++|.+|+ ++ |++++| .|..
T Consensus 17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rri--HTgEKP~~~~~ 63 (73)
T 1x3c_A 17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAV--HKSDLPAFSAE 63 (73)
T ss_dssp CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHH--SSSCCCCCCCS
T ss_pred cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhh--CCCCCCccccc
Confidence 3444567999999965 999999999999998 68 999988 6644
No 154
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.42 E-value=1.6e-07 Score=58.61 Aligned_cols=37 Identities=30% Similarity=0.536 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|+
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 42 (42)
T 2el5_A 5 SSGENPYECSECGKAFNRKDQLISHQRT--HAGESGPSSG 42 (42)
T ss_dssp SSSCCSEECSSSCCEESSHHHHHHHHGG--GCCCCSCCCC
T ss_pred CCCCCCccCCCcChhhCCHHHHHHHHHh--cCCCCCCCCC
Confidence 4688999999999999999999999999 888877 663
No 155
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=1.8e-07 Score=58.04 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=32.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C 41 (41)
T 2ept_A 5 SSGQRVYECQECGKSFRQKGSLTLHERI--HTGSGPSSG 41 (41)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHGGG--CCCCSCSCC
T ss_pred cCCCCCeECCCCCCCcCCHHHHHHHHHH--hCCCCCcCC
Confidence 4689999999999999999999999999 988876 55
No 156
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=2.2e-07 Score=59.25 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQNSHLVRHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCBCSSSCCBCSSHHHHHHHHTT--TTTSSCCCCSC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHh--hCCCCCCCCCC
Confidence 4689999999999999999999999999 988877 7763
No 157
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=1.6e-07 Score=57.68 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=29.8
Q ss_pred CCCCCCcccccc--cccccCCHHHHHHHHhhhccCCC
Q 019380 8 PKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 8 ~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+.+++|||+|+. |++.|.+++.|..|+++ |++.
T Consensus 3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~--Htg~ 37 (38)
T 2eln_A 3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKV--HTAL 37 (38)
T ss_dssp CSSCCCCEECSSSSCCCEESCHHHHHHHHHH--HSCC
T ss_pred CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCC
Confidence 457899999986 99999999999999999 8865
No 158
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=2e-07 Score=59.56 Aligned_cols=38 Identities=29% Similarity=0.532 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSV--HSGERPSGPSS 45 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHTTT--TTSCCSCTTSC
T ss_pred CCCCcccCCCCCCcccCcHHHHHHHHHh--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 159
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.9e-07 Score=59.62 Aligned_cols=38 Identities=32% Similarity=0.536 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytp_A 7 GTGERHYECSECGKAFARKSTLIMHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTT--TSCCCCCSSCC
T ss_pred cCCCCCeECCcCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 7753
No 160
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=2.5e-07 Score=58.98 Aligned_cols=38 Identities=26% Similarity=0.480 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHTT--TSSSCCCCTTC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 7753
No 161
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.39 E-value=2e-07 Score=59.48 Aligned_cols=38 Identities=24% Similarity=0.459 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emj_A 7 GTGEKPFECAECGKSFSISSQLATHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHHH--HTTSCSSSSCC
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7763
No 162
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=2.3e-07 Score=59.15 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTT--TSCSCCSSTTC
T ss_pred CCCCcCeECCCCCcccCChhHHHHHhHh--cCCCCCCCCCC
Confidence 4689999999999999999999999999 988877 7753
No 163
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=2.2e-07 Score=59.21 Aligned_cols=38 Identities=26% Similarity=0.504 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFNTKSNLIVHQRT--HTGEKPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHT--SCSSSSSCCCC
T ss_pred CCCCCCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 988887 7753
No 164
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=2e-07 Score=59.43 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em4_A 7 GTGQRPYECIECGKAFKTKSSLICHRRS--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHHH--HSSSSCCCCCC
T ss_pred cCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888887 7753
No 165
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.9e-07 Score=59.25 Aligned_cols=37 Identities=24% Similarity=0.540 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFRAKGNLVTHQRI--HTGEKSGPSS 44 (45)
T ss_dssp CCSCCSEEETTTTEEESSHHHHHHHHTT--TSSCCCCCSC
T ss_pred CCCCcCccCCCCCCccCChHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 988877 775
No 166
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=2.7e-07 Score=58.82 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=33.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eoh_A 7 GSGKKPYECKECRKTFIQIGHLNQHKRV--HTGERSSGPS 44 (46)
T ss_dssp CCCSCSCCCSSSCCCCSSHHHHHHHHHH--CSSCCSCSTT
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4688999999999999999999999999 988877 775
No 167
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=2.6e-07 Score=58.88 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=33.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2emg_A 7 GTGENPFICSECGKVFTHKTNLIIHQKI--HTGERPSGPSS 45 (46)
T ss_dssp CCSCCSCBCTTTCCBCSSHHHHHHHHTT--TSCCCCSCSCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4688999999999999999999999999 988877 7753
No 168
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=2.4e-07 Score=58.98 Aligned_cols=38 Identities=29% Similarity=0.456 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~p~~C~~ 45 (46)
T 2yts_A 7 GTGEKPYICNECGKSFIQKSHLNRHRRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHGGG--TSSCCSSCCCC
T ss_pred CCCCcCEECCCCChhhCChHHHHHHHHh--cCCCCCcCCCC
Confidence 4689999999999999999999999999 988887 7763
No 169
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=2.6e-07 Score=58.97 Aligned_cols=38 Identities=26% Similarity=0.466 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2en9_A 7 GAGKKLFKCNECKKTFTQSSSLTVHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCBCTTTCCBCSSHHHHHHHHHH--HTSSCCCSCCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4688999999999999999999999999 888877 7753
No 170
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=2.8e-07 Score=58.80 Aligned_cols=38 Identities=24% Similarity=0.520 Sum_probs=33.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQNSHLHSHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSBCCSSSCCCBSSHHHHHHHGGG--GTTCCCSSCCC
T ss_pred CCCCcCCCCCCCCcccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 171
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=2.6e-07 Score=58.99 Aligned_cols=37 Identities=27% Similarity=0.561 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQASNFIQHRRI--HTGEKPSGPS 44 (46)
T ss_dssp CCCCSSCCCSSSCCCCSSHHHHHHHHHH--HSSCCCSSCC
T ss_pred CCCCCCcCCCCCCCeeCChHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 888877 775
No 172
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.38 E-value=2.3e-07 Score=57.78 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|
T Consensus 6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~k~~~C 42 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFTQRGSLAVHQRS--CSQSGPSSG 42 (42)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHH--TTCCCCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHhhh--cCCCCCCCC
Confidence 4688999999999999999999999999 988876 55
No 173
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=2.7e-07 Score=58.74 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ep1_A 7 GTGEKPYECSDCGKSFIKKSQLHVHQRI--HTGENPSGPSS 45 (46)
T ss_dssp CSSCCSSCCSSSCCCCSSHHHHHHHHGG--GSSSCCCSSSC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 174
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=2.4e-07 Score=59.07 Aligned_cols=38 Identities=21% Similarity=0.436 Sum_probs=33.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq2_A 7 GTGGKPYQCNECGKAFSQTSKLARHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp SSSSCSSSCCSSCCCCSSHHHHHHHGGG--GCCCCCCCCCC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 175
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=2.6e-07 Score=58.87 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=33.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emi_A 7 GTGERHYECSECGKAFIQKSTLSMHQRI--HRGEKPSGPSS 45 (46)
T ss_dssp CSSCCCEECSSSCCEESSHHHHHHHHGG--GCSCCCCSCCC
T ss_pred cCCCCCCCCCCCCcccCCHHHHHHHHhH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 176
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=2.3e-07 Score=58.48 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eoj_A 7 GTGENPYECCECGKVFSRKDQLVSHQKT--HSGQSGPSSG 44 (44)
T ss_dssp SSSCCSCEETTTTEECSSHHHHHHHHTT--SSSSCSCCCC
T ss_pred cCCCcCeeCCCCCCccCCHHHHHHHHHH--cCCCCCCCCC
Confidence 4689999999999999999999999999 888876 663
No 177
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.3e-07 Score=59.07 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=34.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRARSSLAIHQAT--HSGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECTTSCCEESSHHHHHHHHHH--HCCCSCSCTTC
T ss_pred CCCCCCeeccccCChhcCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 178
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.9e-07 Score=59.17 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=35.5
Q ss_pred CCCCCccccc--ccccccCCHHHHHHHHhhhccCCCCC-ccccC
Q 019380 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (342)
Q Consensus 9 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C 49 (342)
.++++||+|. .|++.|..+..|..|+++ |+++++ +|..|
T Consensus 7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 48 (48)
T 2ent_A 7 GTGEKPFACTWPGCGWRFSRSDELSRHRRS--HSGVKPSGPSSG 48 (48)
T ss_dssp SCCCCCEECCSSSCCCEESSHHHHHHHHTT--SCCCCSCSSCCC
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999998 899999999999999999 998887 88876
No 179
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=2.4e-07 Score=57.84 Aligned_cols=36 Identities=22% Similarity=0.448 Sum_probs=32.4
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2eos_A 6 SGGEKPYPCEICGTRFRHLQTLKSHLRI--HTGSGPSSG 42 (42)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHTTT--TSCCSSTTC
T ss_pred cCCCCCEECCCCCCccCCHHHHHHHHHh--cCCCCCCCC
Confidence 4688999999999999999999999999 888876 55
No 180
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.5e-07 Score=59.00 Aligned_cols=37 Identities=24% Similarity=0.479 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2enh_A 7 GTGEKPYECDVCRKAFSHHASLTQHQRV--HSGEKPSGPS 44 (46)
T ss_dssp CCCSSSCBCTTTCCBCSSSHHHHHHGGG--SCCSCCCCCC
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 988877 775
No 181
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.9e-07 Score=57.94 Aligned_cols=37 Identities=22% Similarity=0.424 Sum_probs=33.2
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eof_A 7 GTGEKPYECNECQKAFNTKSNLMVHQRT--HTGESGPSSG 44 (44)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHH--TTTSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHhHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 888876 663
No 182
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.6e-07 Score=58.89 Aligned_cols=38 Identities=29% Similarity=0.517 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQKAHLAQHQKT--HTGEKPSGPSS 45 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHHH--HCCCCCCCSCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 183
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.35 E-value=2.9e-07 Score=57.94 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2en7_A 7 GTGMKPYVCNECGKAFRSKSYLIIHTRT--HTGESGPSSG 44 (44)
T ss_dssp SSSSSSSCCTTTCCCCSSHHHHHHHHTT--TCCSSSSCCC
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHhhh--cCCCCCCCCC
Confidence 4688999999999999999999999999 888876 663
No 184
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.35 E-value=3.1e-07 Score=58.46 Aligned_cols=38 Identities=26% Similarity=0.488 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFAQKANLTQHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHHTT--TSSCCSSCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 185
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.35 E-value=3.1e-07 Score=58.55 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq1_A 7 GTGEKPYKCNECGKAFRAHSNLTTHQVI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSCCCCCTTTTCCCSSHHHHHHHHTT--TCCSCCSSCCC
T ss_pred cCCCCCeECCcCChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 186
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=98.35 E-value=2.6e-07 Score=62.44 Aligned_cols=48 Identities=31% Similarity=0.588 Sum_probs=39.9
Q ss_pred ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHH-hhcCCC
Q 019380 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHK-EACSLS 104 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~-~~h~~~ 104 (342)
.|..|++.|.+...|..|+ .++| .|+.|++.|...+.|..|+ +.|.++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYRSHTNEKPY------------PCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHHTTTSSCSE------------ECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred cCCCCccccCCHHHHHHHHHHhCCCCCc------------cCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 8999999999999999998 2234 4688999999999999997 566644
No 187
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.35 E-value=3.5e-07 Score=54.47 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=30.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
.++++||+|+.|++.|..+..|..|+++ |++++|
T Consensus 2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~ 35 (35)
T 1srk_A 2 SSGKRPFVCRICLSAFTTKANCARHLKV--HTDTLS 35 (35)
T ss_dssp CSCCSCEECSSSCCEESSHHHHHHHHGG--GTSCCC
T ss_pred CCCCcCeeCCCCCcccCCHHHHHHHHHH--cCCCCC
Confidence 3689999999999999999999999999 887654
No 188
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=98.35 E-value=3.1e-08 Score=72.88 Aligned_cols=58 Identities=17% Similarity=0.499 Sum_probs=49.5
Q ss_pred ccccCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAI 115 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~ 115 (342)
.|..|++.|.+...|..|+ .++|. |+.|++.|...+.|..|++.|++ .++.|+.|+..
T Consensus 5 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~------------C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~ 67 (88)
T 1llm_C 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFA------------CDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL 67 (88)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHHCCCCEE------------CTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCCCCcc------------CCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHH
Confidence 8999999999999999998 34454 58899999999999999999984 67788877654
No 189
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.35 E-value=3.4e-07 Score=54.40 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=30.1
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
++++||+|+.|++.|.++..|..|+++ |++++|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~kp 35 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVSSIRLRSHIRE--VHGAAQ 35 (35)
T ss_dssp CCCCSEECSSSCCEESSHHHHHHHHHH--TSCTTC
T ss_pred CCCCCeECCCCcchhCCHHHHHHHHHH--HcCCCC
Confidence 578999999999999999999999999 887654
No 190
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=1.6e-07 Score=65.03 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=32.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc-ccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK-ISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~-~c~~~~~ 117 (342)
.|+.|++.|. .+.|..|+++ .+++|+.|+ .|++...
T Consensus 12 ~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~ 48 (66)
T 2eod_A 12 PCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTV 48 (66)
T ss_dssp ECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEE
T ss_pred eccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccc
Confidence 4789999999 9999999999 999999999 9998643
No 191
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.34 E-value=3e-07 Score=58.60 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQS--HTGERHSGPS 44 (46)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHH--HTCCCBTTTB
T ss_pred cCCCCCEECcccCCccCCHhHHHHHHHH--cCCCCCCCCC
Confidence 4689999999999999999999999999 888877 775
No 192
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.34 E-value=1.3e-07 Score=66.74 Aligned_cols=61 Identities=20% Similarity=0.498 Sum_probs=46.5
Q ss_pred HHHHHHhhhccCCCCC-ccc--cCccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhh
Q 019380 29 HLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA 100 (342)
Q Consensus 29 ~L~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~ 100 (342)
.+..|.... |++.++ .|. .|++.|.....|..|+ .++|. |+.|++.|...+.|..|+++
T Consensus 5 ~~~~~~~~~-~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 5 PMNNLLNYV-VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ------------CRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp ---CTTSCC-CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEE------------CTTTCCEESCHHHHHHHHTT
T ss_pred Cccchhhcc-CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeE------------CCCCCchhCCHHHHHHHHHh
Confidence 344454432 777777 997 6999999999999998 33444 68899999999999999998
Q ss_pred cC
Q 019380 101 CS 102 (342)
Q Consensus 101 h~ 102 (342)
|.
T Consensus 72 Ht 73 (73)
T 1f2i_G 72 HT 73 (73)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 193
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=2.5e-07 Score=58.32 Aligned_cols=37 Identities=19% Similarity=0.467 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2yu5_A 7 GAGENPFKCSKCDRVFTQRNYLVQHERT--HARKSGPSSG 44 (44)
T ss_dssp CSCCCSEECSSSSCEESSSHHHHHHHHH--CCCCCSSCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHhHh--cCCCCCCCCC
Confidence 4689999999999999999999999999 888876 663
No 194
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.33 E-value=2.8e-07 Score=58.78 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=33.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRV--HTQETLSGPS 44 (46)
T ss_dssp CSSCCSEEETTTTEEESSHHHHHHHHHH--HSSCCSSSCC
T ss_pred CCCCCCeECcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 888877 775
No 195
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.33 E-value=2.6e-07 Score=57.58 Aligned_cols=36 Identities=28% Similarity=0.541 Sum_probs=32.4
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2ytb_A 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRV--HTGSGPSSG 42 (42)
T ss_dssp CCSCCSBCCTTTTCCBSSHHHHHTTGGG--TSCCSCCCC
T ss_pred cCCCCCeeCCCccchhCCHHHHHHHHHH--hCCCCCCCC
Confidence 4689999999999999999999999999 888876 55
No 196
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=3.8e-07 Score=57.47 Aligned_cols=37 Identities=27% Similarity=0.566 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2emb_A 7 GHTRKRYECSKCQATFNLRKHLIQHQKT--HAAKSGPSSG 44 (44)
T ss_dssp CCCCSSEECTTTCCEESCHHHHHHHGGG--GCCCCCTTCC
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCC
Confidence 4688999999999999999999999999 888877 663
No 197
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=4e-07 Score=57.49 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=32.4
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~~ 43 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIWKSLLIVHERT--HAGVSGPSS 43 (44)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHGG--GSSCSCCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHhH--hcCCCCCCC
Confidence 4689999999999999999999999999 888876 54
No 198
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=3.6e-07 Score=57.62 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRHSSLLIEHQAL--HAGESGPSSG 44 (44)
T ss_dssp CSSSCCCCCTTTCCCCSSHHHHHHHHHH--HTTSCCCCCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHH--HCCCCCCCCC
Confidence 4688999999999999999999999999 888877 663
No 199
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=2.6e-07 Score=58.84 Aligned_cols=38 Identities=26% Similarity=0.449 Sum_probs=33.8
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~ 48 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~kp~~C~~ 45 (46)
T 2eor_A 7 GTGEKPYNCEECGKAFIHDSQLQEHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECTTTCCEESSHHHHHHHHHH--HHSCCCSSSTT
T ss_pred cCCCcCccCCCCCCCcCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 4689999999999999999999999999 888877 7753
No 200
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=2.2e-07 Score=57.98 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=32.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|.++..|..|+++ |+++++ .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2en2_A 6 SGGEKPYKCETCGARFVQVAHLRAHVLI--HTGSGPSSG 42 (42)
T ss_dssp CCSSCSEECTTTCCEESSHHHHHHHTHH--HHSCCSSCC
T ss_pred cCCCCCEeCCCcChhhCCHHHHHHHHHH--cCCCCCCCC
Confidence 4689999999999999999999999999 888776 55
No 201
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.31 E-value=3.6e-07 Score=55.15 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=30.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
.++++||+|+.|++.|..+..|..|+++ |++++|
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~kp 37 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLIKSHIKT--NHPEVS 37 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHHHHHHHH--HCSSCC
T ss_pred CCCCCCcCCCCCCCccCCHHHHHHHHHH--HcCCCC
Confidence 4688999999999999999999999999 887754
No 202
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.31 E-value=3.9e-07 Score=57.98 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=33.5
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFSVRSSLTTHQAI--HTGKKPSGPS 44 (46)
T ss_dssp SCCCCSSEETTTTEECSSHHHHHHHHTT--SCCCCCCCSC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4688999999999999999999999999 988877 775
No 203
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.31 E-value=3.1e-07 Score=58.54 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCC-CCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSV-HQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~-~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |++ +++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~~C~ 45 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSCSKYLTQHERI--HTRGVKSGPSS 45 (46)
T ss_dssp CCCSCCEECSSSCCEESSSHHHHHHHTT--CCSCCTTSSSC
T ss_pred cCCCCCEECcCCCCcCCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4688999999999999999999999999 988 776 775
No 204
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.31 E-value=3.1e-08 Score=69.70 Aligned_cols=56 Identities=21% Similarity=0.320 Sum_probs=45.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhc-----CCCcccCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHL-----TGPLSKAHC 72 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C 72 (342)
.++++||+|+.|++.|..+..|.. ...+.|..|++.|.....|..|+ .++|.|+.|
T Consensus 13 h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C 73 (73)
T 2ctu_A 13 HLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG 73 (73)
T ss_dssp CCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred hCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence 468899999999999998775554 23349999999999999999998 356777665
No 205
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.28 E-value=5.5e-07 Score=55.16 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=30.7
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
++++||+|+.|++.|..+..|..|+++ |+++++
T Consensus 2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~ 34 (39)
T 1njq_A 2 WPPRSYTCSFCKREFRSAQALGGHMNV--HRRDRA 34 (39)
T ss_dssp CCSSSEECTTTCCEESSHHHHHHHHHT--TCCSCT
T ss_pred CCCCceECCCCCcccCCHHHHHHHHHH--cCCCcc
Confidence 578999999999999999999999999 988876
No 206
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.28 E-value=3.1e-07 Score=58.55 Aligned_cols=37 Identities=30% Similarity=0.555 Sum_probs=33.2
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGRRSHLAGHLRL--HSREKSSGPS 44 (46)
T ss_dssp SSCCCSCCCSSSCCCCSSHHHHHHHHHH--HHHTTCCCSC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 888776 775
No 207
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.27 E-value=4.4e-07 Score=58.50 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.3
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGA 114 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~ 114 (342)
.|+.|++.|.....|.+|+++|++++++.|++|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k 48 (48)
T 2epr_A 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48 (48)
T ss_dssp EETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred eCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 36889999999999999999999999999999874
No 208
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.24 E-value=2.8e-07 Score=58.13 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=32.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|+
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTRIFHLTRHQKI--HTRKSGPSSG 44 (44)
T ss_dssp CCCCCCEEETTTTEEESSSHHHHTTHHH--HCCCCCCSCC
T ss_pred CCCCCCeECcccCcccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4688999999999999999999999999 888876 663
No 209
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=7.5e-07 Score=53.39 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+.|++.|..+..|..|+++ |+++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2elv_A 4 GSSGLLYDCHICERKFKNELDRDRHMLV--HGDK 35 (36)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTT--TSTT
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHH--hcCC
Confidence 4688999999999999999999999999 8765
No 210
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=1e-06 Score=52.61 Aligned_cols=33 Identities=33% Similarity=0.526 Sum_probs=29.8
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+.++++||+|+.|++.|..+..|..|+++ |+++
T Consensus 3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~e 35 (36)
T 2elr_A 3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL--HTAD 35 (36)
T ss_dssp CCCCCSSCBCTTTCCBCSSHHHHHHHHHH--HSSC
T ss_pred CCCCCCCeecCcCCCCcCchHHHHHHHHH--hcCC
Confidence 35689999999999999999999999999 8765
No 211
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.22 E-value=1e-06 Score=56.00 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|+++|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoq_A 14 KCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred CCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 468899999999999999999999999999875
No 212
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=9.9e-07 Score=52.82 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=29.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+.|++.|..+..|..|+++ |+++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2elq_A 4 GSSGKPFKCSLCEYATRSKSNLKAHMNR--HSTE 35 (36)
T ss_dssp SCCCCSEECSSSSCEESCHHHHHHHHHH--SSTT
T ss_pred CCCCCCccCCCCCchhCCHHHHHHHHHH--hccC
Confidence 4688999999999999999999999999 8765
No 213
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.21 E-value=1.1e-06 Score=60.91 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=34.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQ 50 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~ 50 (342)
.++++||+|..|+|.|.++..|..|+++ |++....|..+.
T Consensus 8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~--Htg~~~~~~~~~ 47 (66)
T 2epp_A 8 LREAGILPCGLCGKVFTDANRLRQHEAQ--HGVTSLQLGYID 47 (66)
T ss_dssp CCCCCCCCCTTTCCCCSCHHHHHHHHHH--HTTTSCCCCSCC
T ss_pred CCCccCcCCCCCCCccCCHHHHHhhhhh--hCCCcccccccc
Confidence 4689999999999999999999999999 888766565554
No 214
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=98.21 E-value=4.3e-07 Score=65.67 Aligned_cols=50 Identities=24% Similarity=0.469 Sum_probs=45.9
Q ss_pred CCCCcccccc--cccccCCHHHHHHHHhhhccCCCCCcccc---CccccCChhhhhhhc
Q 019380 10 RSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQPKCAV---CQKLSKSFESLREHL 63 (342)
Q Consensus 10 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~H~~~~~~C~~---C~~~f~~~~~l~~H~ 63 (342)
++++||+|+. |++.|.++..|..|+++ |++ +.|.. |++.|...+.|..|+
T Consensus 27 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~--~~C~~~~~C~~~f~~~~~l~~H~ 81 (85)
T 2j7j_A 27 TQQLPYECPHEGCDKRFSLPSRLKRHEKV--HAG--YPCKKDDSCSFVGKTWTLYLKHV 81 (85)
T ss_dssp HTTCCEECCSTTCCCEESSHHHHHHHHHH--HHS--EECCSCSSCCCEESSHHHHHHHH
T ss_pred CCCCCeeCCCCCCcCccCCHHHHHHHHHH--hCC--CCCCCCCCCCCccCCHHHHHHHH
Confidence 3678999988 99999999999999999 777 78988 999999999999985
No 215
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.21 E-value=1e-06 Score=56.03 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emk_A 14 ECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 216
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.21 E-value=3.5e-07 Score=58.25 Aligned_cols=37 Identities=19% Similarity=0.389 Sum_probs=32.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~ 47 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2en3_A 7 GTGEKPFQCKECGMNFSWSCSLFKHLRS--HERTDPSGPS 44 (46)
T ss_dssp SCCCCSEECSSSCCEESSSHHHHHHHHH--HHHSCCSSCS
T ss_pred cCCCCCeeCcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 887776 764
No 217
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.20 E-value=8.7e-07 Score=56.36 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ep2_A 14 ECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred CCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 218
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.20 E-value=8.2e-07 Score=52.33 Aligned_cols=30 Identities=33% Similarity=0.703 Sum_probs=27.9
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
+||+|+.|++.|..+..|..|+++ |+++++
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~~--H~~~~~ 30 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHITL--HELLGE 30 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHH--HTTTCC
T ss_pred CcccCCCCCchhCCHHHHHHHHHH--hCCCCC
Confidence 689999999999999999999999 888765
No 219
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.19 E-value=9.7e-07 Score=56.13 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ytj_A 14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred ECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 367899999999999999999999999999875
No 220
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.19 E-value=9.6e-07 Score=56.19 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ely_A 14 KCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred ccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 221
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.19 E-value=1e-06 Score=56.04 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2elz_A 14 KCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred eCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 222
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.19 E-value=9.8e-07 Score=52.76 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=29.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+.|++.|..+..|..|+++ |+++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2elt_A 4 GSSGKPYKCPQCSYASAIKANLNVHLRK--HTGE 35 (36)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHHH--HTCC
T ss_pred CCCCCCCCCCCCCcccCCHHHHHHHHHH--ccCC
Confidence 4688999999999999999999999999 8765
No 223
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.19 E-value=1.2e-06 Score=55.58 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eq4_A 14 NCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG 46 (46)
T ss_dssp CBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred ECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence 468899999999999999999999999999875
No 224
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.19 E-value=1.4e-06 Score=55.40 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em0_A 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence 468889999999999999999999999999875
No 225
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.19 E-value=1.1e-06 Score=55.94 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epz_A 14 DCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred ECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 226
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.18 E-value=1.3e-06 Score=55.40 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eop_A 14 ECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG 46 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred eCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 468899999999999999999999999999875
No 227
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=1e-06 Score=52.72 Aligned_cols=32 Identities=34% Similarity=0.520 Sum_probs=29.2
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+.|++.|..+..|..|+++ |+++
T Consensus 4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2els_A 4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI--HTNE 35 (36)
T ss_dssp TSCCCCEECTTTCCEESSHHHHHHHHHH--HCCC
T ss_pred CCCCCCEECCCCCceeCCHHHHHHHHHH--hCCC
Confidence 4688999999999999999999999999 8765
No 228
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.17 E-value=1.2e-06 Score=55.76 Aligned_cols=33 Identities=33% Similarity=0.418 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytq_A 14 GCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred CCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 229
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.17 E-value=1.4e-06 Score=55.34 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eov_A 14 KCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred cCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 230
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.16 E-value=6.1e-07 Score=66.24 Aligned_cols=43 Identities=16% Similarity=0.406 Sum_probs=37.4
Q ss_pred CCCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccc
Q 019380 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKL 52 (342)
Q Consensus 8 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~ 52 (342)
..++++||+|+.|++.|..+..|..|+++ |+++++ +|..|.+.
T Consensus 19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp~~C~~~~~~ 62 (88)
T 1x6f_A 19 PRLQNSTYQCKHCDSKLQSTAELTSHLNI--HNEEFQKRAKRQERR 62 (88)
T ss_dssp SCCCCSCEECSSSCCEESSHHHHHHHHHH--HHHHHHHHCCCCSCC
T ss_pred ccCCCCCCcCCCCCCEeCCHHHHHHHHHH--hCCCCCcccchhhhH
Confidence 35689999999999999999999999999 888887 88776543
No 231
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.16 E-value=1.3e-06 Score=55.57 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=29.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytn_A 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred ECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence 468899999999999999999999999999875
No 232
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.15 E-value=1e-06 Score=55.77 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=31.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISG 113 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~ 113 (342)
.|+.|++.|..++.|..|+++|++++++.|+.|+
T Consensus 12 ~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp EETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 4688999999999999999999999999999875
No 233
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.15 E-value=9.1e-07 Score=56.31 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=29.3
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|+++|...+.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoo_A 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred EccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 367889999999999999999999999999875
No 234
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.14 E-value=1.1e-06 Score=55.92 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytm_A 14 KCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG 46 (46)
T ss_dssp SBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred CCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 468899999999999999999999999999875
No 235
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.14 E-value=1.3e-06 Score=55.54 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emf_A 14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred ECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 236
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.14 E-value=1.4e-06 Score=55.37 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2el4_A 14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG 46 (46)
T ss_dssp ECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred ECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 237
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=98.13 E-value=1.8e-06 Score=51.97 Aligned_cols=31 Identities=32% Similarity=0.595 Sum_probs=28.4
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~ 41 (342)
.++++||+|+.|++.|.++..|..|+++ |++
T Consensus 6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~ 36 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSRSDHLALHRKR--HML 36 (37)
T ss_dssp TCCSSSBCCTTTCCCBSSHHHHHHHHGG--GTC
T ss_pred CCCCCCccCCCCCcccCcHHHHHHHHHH--hcc
Confidence 4689999999999999999999999999 765
No 238
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.13 E-value=1.4e-06 Score=55.36 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2em7_A 14 KCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred cCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 239
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.13 E-value=1.4e-06 Score=55.39 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2eq0_A 14 KCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 240
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.12 E-value=1.5e-06 Score=55.21 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ema_A 14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred CCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 367889999999999999999999999999875
No 241
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.12 E-value=1.5e-06 Score=55.17 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=29.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eoe_A 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG 46 (46)
T ss_dssp EETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred ECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 242
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.12 E-value=1.7e-06 Score=54.98 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eml_A 14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred eCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence 367889999999999999999999999999876
No 243
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.11 E-value=1.5e-06 Score=55.20 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ene_A 14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred ECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 244
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.11 E-value=1.2e-06 Score=58.04 Aligned_cols=45 Identities=20% Similarity=0.350 Sum_probs=33.7
Q ss_pred cccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCC
Q 019380 51 KLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 51 ~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
+.|.....|..|+ .++| .|+.|++.|...+.|..|+++|.+++|+
T Consensus 4 k~~~~~~~l~~h~~~H~~~k~~------------~C~~C~k~f~~~~~L~~H~~~H~~~kp~ 53 (54)
T 1yui_A 4 KRAKHPPGTEKPRSRSQSEQPA------------TCPICYAVIRQSRNLRRHLELRHFAKPG 53 (54)
T ss_dssp CCCSCSSCCCCCHHHHTSSCCE------------ECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred cccCCCcchhhHHHhcCCCCCc------------cCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence 4555666666665 2334 3678899999999999999999999886
No 245
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.11 E-value=1.4e-06 Score=55.39 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c 46 (46)
T 2ytk_A 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred eCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence 367899999999999999999999999999875
No 246
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.11 E-value=1.5e-06 Score=55.21 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em5_A 14 QCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred ECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 247
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.11 E-value=1.7e-06 Score=49.03 Aligned_cols=29 Identities=17% Similarity=0.430 Sum_probs=26.7
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
++||.|+.|++.|..+..|..|+++ |+++
T Consensus 1 ~k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 29 (30)
T 2m0d_A 1 MKPYQCDYCGRSFSDPTSKMRHLET--HDTD 29 (30)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHT--TCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHH--hccC
Confidence 5799999999999999999999999 8765
No 248
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.11 E-value=1.5e-06 Score=55.14 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emm_A 14 KCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred eCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 367889999999999999999999999999876
No 249
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.10 E-value=1.5e-06 Score=55.23 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|+++|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emy_A 14 ECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred CCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 250
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.10 E-value=1.7e-06 Score=54.89 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytr_A 14 KCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred CCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 251
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.10 E-value=1.3e-06 Score=48.72 Aligned_cols=27 Identities=26% Similarity=0.406 Sum_probs=25.0
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccC
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~ 40 (342)
++||+|+.|++.|..++.|..|+++ |+
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvg_A 1 AAPYRCPLCRAGCPSLASMQAHMRG--HS 27 (27)
T ss_dssp CCTEEETTTTEEESCHHHHHHHHTT--CC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHh--cC
Confidence 5799999999999999999999998 64
No 252
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.10 E-value=1.5e-06 Score=54.60 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|+++|..++.|..|+++|.+++++.|+.|
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 44 (44)
T 2emx_A 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG 44 (44)
T ss_dssp ECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 253
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.10 E-value=1.9e-06 Score=54.81 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=29.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2el6_A 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG 46 (46)
T ss_dssp ECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 254
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.09 E-value=1.8e-06 Score=54.84 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epw_A 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred eCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 255
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.09 E-value=1.8e-06 Score=48.04 Aligned_cols=27 Identities=15% Similarity=0.445 Sum_probs=25.1
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccC
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~ 40 (342)
++||+|+.|++.|..+..|..|+++ |+
T Consensus 1 ek~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRDFSAMTKHLRT--HG 27 (27)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHH--CC
T ss_pred CcCccCCCcChhhCCHHHHHHHHHH--cc
Confidence 5799999999999999999999998 64
No 256
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.09 E-value=1.4e-06 Score=52.61 Aligned_cols=32 Identities=25% Similarity=0.243 Sum_probs=28.5
Q ss_pred CCCCCcccccccccccCCHHHHHHH-HhhhccCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEH-MKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H-~~~~~H~~~ 42 (342)
.++++||+|+.|++.|..+..|..| +++ |++.
T Consensus 4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~ 36 (37)
T 2elm_A 4 GSSGHLYYCSQCHYSSITKNCLKRHVIQK--HSNI 36 (37)
T ss_dssp SSSSCEEECSSSSCEEECHHHHHHHHHHH--TCCC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHHH--ccCc
Confidence 3578999999999999999999999 888 8754
No 257
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.09 E-value=1.5e-06 Score=55.26 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=29.4
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytg_A 14 KCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 367889999999999999999999999999876
No 258
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.08 E-value=1.8e-06 Score=54.79 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytd_A 14 KCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred ECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence 367899999999999999999999999999876
No 259
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.08 E-value=2.1e-06 Score=54.48 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=29.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|...+.|..|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em9_A 14 NCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred ECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence 367889999999999999999999999999876
No 260
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.08 E-value=1.5e-06 Score=55.27 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emh_A 14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred CCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 368899999999999999999999999999875
No 261
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.08 E-value=2e-06 Score=54.60 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|...+.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2enc_A 14 KCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred CCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence 367899999999999999999999999999876
No 262
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.08 E-value=1.6e-06 Score=55.05 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en6_A 14 GCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG 46 (46)
T ss_dssp EETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred ECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 263
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.07 E-value=2e-06 Score=54.65 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=30.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|.+|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ep0_A 14 KCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred eCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 264
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.07 E-value=2.3e-06 Score=54.30 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eme_A 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred ECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 367889999999999999999999999999876
No 265
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.07 E-value=2e-06 Score=48.18 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=25.7
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccCC
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~ 41 (342)
++||+|+.|++.|..+..|..|+++ |++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~ 28 (28)
T 2kvf_A 1 MRPYSCSVCGKRFSLKHQMETHYRV--HTG 28 (28)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHTT--SCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHh--cCC
Confidence 5799999999999999999999998 763
No 266
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.07 E-value=1.7e-06 Score=55.00 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=29.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ysp_A 14 KCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG 46 (46)
T ss_dssp EETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred ECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 267
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.07 E-value=1.6e-06 Score=55.09 Aligned_cols=33 Identities=12% Similarity=0.034 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em8_A 14 KCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred ECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 368899999999999999999999999999876
No 268
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=98.06 E-value=2e-06 Score=52.00 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=25.3
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhh
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
..+||||+|+.|+|+|+++++|.+|+.-
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~H~py 30 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEAHQAY 30 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHccCcCCe
Confidence 4689999999999999999999999844
No 269
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.06 E-value=1.6e-06 Score=55.06 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=29.4
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emp_A 14 MCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 367889999999999999999999999999875
No 270
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=1.3e-06 Score=52.59 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=28.9
Q ss_pred CCCCCcccccccccccCCH-HHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCVACYKQFKRK-DHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~-~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+.|++.|..+ ..|..|+++ |+++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~--H~~~ 36 (37)
T 2elp_A 4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWA--HEGV 36 (37)
T ss_dssp CCCCCCEECSSSSCEECSSCHHHHHHHHH--HHTC
T ss_pred CCCCCCeECCCCChhhccCHHHHHHHHHh--cCCC
Confidence 4588999999999999999 999999999 7764
No 271
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.06 E-value=2.1e-06 Score=54.47 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=29.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2en1_A 14 KCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp EETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred eCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 367889999999999999999999999999875
No 272
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=98.06 E-value=2.2e-06 Score=55.31 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=28.9
Q ss_pred CCCCCcccccccccccCCHHHHHHHHh-hhccCCCCC
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP 44 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~H~~~~~ 44 (342)
.++++||+|..|++.|..+..|..|++ + |+++..
T Consensus 2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~--H~~e~~ 36 (48)
T 3iuf_A 2 EDRDKPYACDICGKRYKNRPGLSYHYAHS--HLAEEE 36 (48)
T ss_dssp CTTTSCEECTTTCCEESSHHHHHHHHHHS--SCC---
T ss_pred CCCCcCEECCCcCcccCCHHHHHHHhhhh--cCCCCC
Confidence 368999999999999999999999999 8 887755
No 273
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=2.2e-06 Score=54.37 Aligned_cols=33 Identities=18% Similarity=0.081 Sum_probs=29.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|...+.|..|+++|.+++++.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en8_A 14 TCDECGKNFCYISALRIHQRVHMGEKCSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred ECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 367889999999999999999999999999875
No 274
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.05 E-value=2.1e-06 Score=54.48 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=29.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|...+.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2yso_A 14 QCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred EccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 367889999999999999999999999999875
No 275
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.05 E-value=2.7e-06 Score=54.14 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=29.8
Q ss_pred cccccccccCChhhHHHHHh-hcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~-~h~~~~~~~~~~c 112 (342)
.|+.|++.|...+.|..|++ +|.+++|+.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C 47 (47)
T 2epx_A 14 ECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG 47 (47)
T ss_dssp CCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred ECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence 46889999999999999999 9999999999875
No 276
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.05 E-value=1.6e-06 Score=55.07 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=29.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2yu8_A 14 KCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred ECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 367888999999999999999999999999875
No 277
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.04 E-value=1.5e-06 Score=55.32 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=29.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|++++++.|++|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytt_A 14 QCSECGKSFSGSYRLTQHWITHTREKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred eCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 468899999999999999999999999999876
No 278
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.04 E-value=4.1e-06 Score=53.16 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yth_A 14 QCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred CCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 46889999999999999999999999999974
No 279
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.04 E-value=2.5e-06 Score=54.17 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=29.3
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~ 46 (46)
T 2ep3_A 14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 367899999999999999999999999999863
No 280
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.03 E-value=4.3e-06 Score=52.94 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=29.1
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep1_A 14 ECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred CCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999974
No 281
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=98.01 E-value=3.3e-06 Score=47.45 Aligned_cols=28 Identities=29% Similarity=0.660 Sum_probs=25.8
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+||+|+.|++.|..+..|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNE 28 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH--HSCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH--hcCC
Confidence 589999999999999999999999 7765
No 282
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.00 E-value=3.1e-06 Score=55.93 Aligned_cols=33 Identities=21% Similarity=0.585 Sum_probs=25.8
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
++++||+|+.|++.|..+..|..|+++ |+++++
T Consensus 20 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~kp 52 (54)
T 1yui_A 20 QSEQPATCPICYAVIRQSRNLRRHLEL--RHFAKP 52 (54)
T ss_dssp TSSCCEECTTTCCEESSHHHHHHHHHH--HTTTSC
T ss_pred CCCCCccCCCCCcccCCHHHHHHHHHH--hccCCC
Confidence 467788888888888888888888888 776654
No 283
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.00 E-value=3.6e-06 Score=53.47 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=28.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..+..|.+|+++|.+++++.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 14 KCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 36889999999999999999999999999874
No 284
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.99 E-value=2.9e-06 Score=51.35 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=29.6
Q ss_pred CCCCccccc--ccccccCCHHHHHHHHhhhccCCCCC
Q 019380 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 10 ~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
++++||+|+ .|++.|.++..|..|+++ |+++++
T Consensus 2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~ 36 (38)
T 1bhi_A 2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK--HEMTLK 36 (38)
T ss_dssp TTCCCEECCCTTTCCEESSHHHHHHHHHH--HHTTTT
T ss_pred CCCcceECCCCCCCcccCCHHHHHHHHHH--hCCCCC
Confidence 578999999 699999999999999999 877654
No 285
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.99 E-value=4.6e-06 Score=55.07 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=30.7
Q ss_pred ccccccccCChhhHHHHHh-hcCCCCCCCCccccccc
Q 019380 81 CNLCMNIFDSPSSLIKHKE-ACSLSAPVPFKISGAID 116 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~-~h~~~~~~~~~~c~~~~ 116 (342)
|+.|++.|.....|.+|++ +|.+++++.|++|++..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F 51 (54)
T 2eps_A 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51 (54)
T ss_dssp CSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred CCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence 6788888889999999987 89999999999888754
No 286
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.99 E-value=2.8e-06 Score=51.30 Aligned_cols=32 Identities=25% Similarity=0.542 Sum_probs=28.8
Q ss_pred CCCCCccccc--ccccccCCHHHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+ .|++.|..++.|..|+++ |+++
T Consensus 3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~e 36 (37)
T 1va1_A 3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW--HTGE 36 (37)
T ss_dssp SSSCCCEECCSTTCCCEESCHHHHHHHHHH--HHTT
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCC
Confidence 4689999998 599999999999999999 8765
No 287
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.98 E-value=3.6e-06 Score=53.44 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=29.3
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
.|+.|++.|..++.|..|+++|.+++++.|+++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~ 46 (46)
T 2em2_A 14 KCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred ECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 367899999999999999999999999999863
No 288
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.98 E-value=3.9e-06 Score=52.50 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 43 (43)
T 2yrm_A 12 FCNECDCRFSEEASLKRHTLQTHSDKSGPSSG 43 (43)
T ss_dssp CCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred ECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence 46889999999999999999999999999873
No 289
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.98 E-value=2.5e-06 Score=48.09 Aligned_cols=28 Identities=36% Similarity=0.694 Sum_probs=25.9
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+||+|+.|++.|..+..|..|+++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHILL--HENK 28 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHTG--GGSC
T ss_pred CCccCCCCCchhCCHHHHHHHHHH--hcCC
Confidence 689999999999999999999999 8765
No 290
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.97 E-value=4.8e-06 Score=52.82 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..+..|..|+++|.+++++.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enh_A 14 ECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45 (46)
T ss_dssp BCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred CCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999873
No 291
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.97 E-value=6.1e-06 Score=52.27 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq1_A 14 KCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred ECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999874
No 292
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.97 E-value=5.5e-06 Score=51.83 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=27.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|..++.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2en7_A 14 VCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44 (44)
T ss_dssp CCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred ECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence 4688999999999999999999999998874
No 293
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.97 E-value=5e-06 Score=52.76 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|.+|+++|.+++++.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoh_A 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred CCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999873
No 294
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.96 E-value=3.9e-06 Score=48.60 Aligned_cols=29 Identities=34% Similarity=0.553 Sum_probs=26.7
Q ss_pred CCccccc--ccccccCCHHHHHHHHhhhccCCC
Q 019380 12 TARHKCV--ACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 12 ~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
++||+|+ .|++.|..+..|..|+++ |+++
T Consensus 1 ek~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~ 31 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIRHKKS--HQEK 31 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHHHHGG--GTCC
T ss_pred CCCCcCcCCCCCCccCCHHHHHHHHHH--ccCC
Confidence 5799999 899999999999999999 8865
No 295
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=97.96 E-value=4.4e-06 Score=58.50 Aligned_cols=53 Identities=23% Similarity=0.358 Sum_probs=38.6
Q ss_pred cCCCCC-cccc--CccccCChhhhhhhc-----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhc
Q 019380 39 HSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEAC 101 (342)
Q Consensus 39 H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h 101 (342)
++..++ .|.. |++.|.....|..|+ .++|.|. .+.|++.|..+..|.+|+++|
T Consensus 12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~----------~~~C~k~f~~~~~l~~H~~~H 72 (72)
T 2epa_A 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS----------WKGCERRFARSDELSRHRRTH 72 (72)
T ss_dssp CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECC----------CTTCCCEESSHHHHHHHTTTC
T ss_pred ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCC----------CCCCCcccCCHHHHHhHhhcC
Confidence 344444 7877 999999999898887 3455441 134888888999999998765
No 296
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.96 E-value=5.1e-06 Score=47.73 Aligned_cols=28 Identities=32% Similarity=0.587 Sum_probs=25.9
Q ss_pred Cccccc--ccccccCCHHHHHHHHhhhccCCC
Q 019380 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+||+|+ .|++.|..+..|..|+++ |+++
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~--H~~~ 30 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRT--HTGE 30 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTT--TSCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHH--hcCC
Confidence 589998 999999999999999999 8865
No 297
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.96 E-value=4.6e-06 Score=52.86 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|.+|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enf_A 14 KCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred ECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 46889999999999999999999999999974
No 298
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.95 E-value=5.1e-06 Score=52.67 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++++.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2emg_A 14 ICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred ECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999974
No 299
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.95 E-value=5.5e-06 Score=52.50 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq2_A 14 QCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45 (46)
T ss_dssp SCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 46889999999999999999999999999874
No 300
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.95 E-value=5.1e-06 Score=52.67 Aligned_cols=32 Identities=25% Similarity=0.415 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yti_A 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred ECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence 46889999999999999999999999999874
No 301
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.95 E-value=4.8e-06 Score=52.82 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytp_A 14 ECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred ECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 302
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.94 E-value=5e-06 Score=52.80 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=29.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eom_A 14 RCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999974
No 303
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.94 E-value=3.3e-06 Score=47.40 Aligned_cols=28 Identities=39% Similarity=0.657 Sum_probs=25.8
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+||+|+.|++.|.....|..|+++ |+++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRI--HSGE 28 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHH--HHTC
T ss_pred CCccCCCCCCccCChhHHHHHHHH--hcCC
Confidence 589999999999999999999999 7765
No 304
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.93 E-value=4.9e-06 Score=52.72 Aligned_cols=32 Identities=19% Similarity=0.418 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em3_A 14 ECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 305
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.93 E-value=5.4e-06 Score=52.49 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~ 45 (46)
T 2yts_A 14 ICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred ECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence 36889999999999999999999999999874
No 306
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=97.93 E-value=5.7e-06 Score=51.27 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=27.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|..++.|..|+++|.+++++.|+
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2el5_A 12 ECSECGKAFNRKDQLISHQRTHAGESGPSSG 42 (42)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred cCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 3688999999999999999999999999874
No 307
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.93 E-value=5.9e-06 Score=52.36 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emi_A 14 ECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred CCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence 36889999999999999999999999999874
No 308
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.92 E-value=4.7e-06 Score=52.60 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|.....|..|+++|.+++++.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (45)
T 2epu_A 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45 (45)
T ss_dssp EETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred cCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999873
No 309
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.92 E-value=5.3e-06 Score=52.52 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytf_A 14 ECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred CCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 310
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=97.92 E-value=4.8e-07 Score=52.93 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=27.6
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~ 44 (342)
+||+|+.|++.|.+++.|..|+++ |+++++
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~~--H~~~kp 30 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIKT--AFIVVA 30 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTTS--SSSSSS
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH--HccCCC
Confidence 589999999999999999999999 888765
No 311
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=97.92 E-value=5.2e-06 Score=52.65 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 14 ECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 312
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.91 E-value=6.2e-06 Score=52.28 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em6_A 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 46889999999999999999999999999874
No 313
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=97.14 E-value=1.4e-06 Score=49.49 Aligned_cols=29 Identities=28% Similarity=0.571 Sum_probs=26.4
Q ss_pred CCcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
++||+|+.|++.|..+..|..|+++ |+++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~ 29 (30)
T 2lvr_A 1 MKPYVCIHCQRQFADPGALQRHVRI--HTGE 29 (30)
Confidence 4799999999999999999999999 7754
No 314
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.91 E-value=5.4e-06 Score=52.49 Aligned_cols=32 Identities=31% Similarity=0.373 Sum_probs=29.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 14 KCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp ECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred eccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 315
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.91 E-value=5.9e-06 Score=52.38 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 14 KCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred ECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 316
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.91 E-value=5.4e-06 Score=52.59 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=28.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|...+.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 14 ECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred CCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 36889999999999999999999999999974
No 317
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.90 E-value=6e-06 Score=52.26 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yrj_A 14 RCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred ECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 36889999999999999999999999999874
No 318
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.90 E-value=4.9e-06 Score=47.02 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=26.0
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~ 43 (342)
+||+|+.|++.|.....|..|+++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--h~~~~ 29 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKT--KHSKE 29 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHH--HTSSC
T ss_pred CCccCCCCCCccCCHHHHHHHHHH--HccCC
Confidence 589999999999999999999999 76654
No 319
>4dfk_A DNA polymerase I, thermostable; DNA polymerase, transferase-DNA complex; HET: DNA DOC 0L5; 1.65A {Thermus aquaticus} PDB: 1jxe_A* 3ktq_A* 3lwl_A* 3lwm_A* 3m8s_A* 3m8r_A* 3oju_A* 3rr7_A* 3rr8_A* 3rrg_A* 3ojs_A* 3rtv_A* 3sv3_A* 3sv4_A* 3syz_A* 3sz2_A* 3t3f_A* 4df4_A* 4df8_A* 4dfj_A* ...
Probab=97.90 E-value=3.6e-06 Score=82.40 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=88.8
Q ss_pred CCCCcceecccccccccCCCcccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHH
Q 019380 121 CRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEI 200 (342)
Q Consensus 121 ~~~~~~v~~D~Ettg~~~~~~~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~~~~ 200 (342)
.+..+.+++|+|+.+.+.-.. ++ ..+.+-. .+ ..| ++ . ++++.|.+|
T Consensus 7 ~~~p~~valDtE~~~~~~~~a-~L-vgi~la~-~~-~a~--~i----------------~-----------~~l~~l~~~ 53 (540)
T 4dfk_A 7 WPPPEGAFVGFVLSRKEPMWA-DL-LALAAAR-GG-RVH--RA----------------P-----------EPYKALRDL 53 (540)
T ss_dssp SCCCTTCEEEEEESSSCTTTC-CE-EEEEEEE-TT-EEE--EC----------------S-----------SHHHHHTTC
T ss_pred CCCCCceEEEEEecCCccCcc-cE-EEEEEEc-CC-EEE--Ee----------------h-----------hhHHHHHHH
Confidence 445578999999998753322 22 3344422 22 222 11 0 356788888
Q ss_pred HhcCCCccccccCCCCCeEEEeeCchhhhhhccccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCCCcH
Q 019380 201 LNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPY 280 (342)
Q Consensus 201 l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A~ 280 (342)
+ ++.++|+||+.||+.-.++..+ .++||+..+..+.|. +++|++|++.|++. + .|.|.
T Consensus 54 l--------------~d~~kV~hn~K~Dl~~~Gi~~~--~~fDT~laAyLL~p~--~~~L~~La~~yl~~-~---gk~a~ 111 (540)
T 4dfk_A 54 K--------------EARGLLAKDLSVLALREGLGLP--PGDDPMLLAYLLDPS--NTTPEGVARRYGGE-W---TEEAG 111 (540)
T ss_dssp S--------------SBCSTTHHHHHHHHHHTTCCCC--BCCCHHHHHHHHCTT--CCCHHHHHHHHTSC-C---CSCHH
T ss_pred H--------------cCCCEEEeccHHHHHHcCCCCC--cceeHHHHHHHhCCC--CCCHHHHHHHHhhh-h---ccchH
Confidence 8 5578899999999993333333 578999999999887 89999999999776 2 47899
Q ss_pred HHHHHHHHHHHHHHhhh
Q 019380 281 EDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 281 ~Da~~t~~l~~~~~~~~ 297 (342)
+||.++++||..+..+.
T Consensus 112 ~DA~~t~~L~~~L~~~L 128 (540)
T 4dfk_A 112 ERAALSERLFANLWGRL 128 (540)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998876
No 320
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.90 E-value=7.1e-06 Score=50.74 Aligned_cols=30 Identities=30% Similarity=0.443 Sum_probs=26.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|+++|..++.|..|+++|.+++|+.|
T Consensus 13 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 13 RCDQCGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred eCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 367889999999999999999999999876
No 321
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.89 E-value=6e-06 Score=51.71 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=27.4
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|+++|..++.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 14 ECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp EETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred eCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 3678899999999999999999999998874
No 322
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.88 E-value=7.1e-06 Score=50.55 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=27.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|++.|...+.|..|+++|.+++|+.|
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 12 ECQECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp ECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred ECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 368899999999999999999999999876
No 323
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.10 E-value=1.7e-06 Score=48.86 Aligned_cols=28 Identities=32% Similarity=0.632 Sum_probs=25.7
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+||+|+.|++.|..+..|..|+++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVRQ--HTGE 28 (29)
Confidence 589999999999999999999999 7764
No 324
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.88 E-value=5.4e-06 Score=52.48 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|...+.|..|+++|.+++|+.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~ 45 (46)
T 2eor_A 14 NCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred cCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence 36789999999999999999999999999974
No 325
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.88 E-value=7e-06 Score=51.48 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=28.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|...+.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 14 ECQECGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp CCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 4688999999999999999999999999874
No 326
>4gmj_B CCR4-NOT transcription complex subunit 7; mRNA decay, deadenylase, RNA bindin; HET: GOL; 2.70A {Homo sapiens}
Probab=97.87 E-value=8.1e-05 Score=66.64 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=96.5
Q ss_pred CcceecccccccccCC-----------------------CcccccceEEeecCCCCe-------EEeeecCCCCCcc-cc
Q 019380 124 PKAVAMDCEMVGGGSN-----------------------GTLDLCARVCLVDEDENV-------IFHTYVQPQLPVT-NY 172 (342)
Q Consensus 124 ~~~v~~D~Ettg~~~~-----------------------~~~~il~~v~vv~~~~~~-------~~~~lv~p~~~i~-~~ 172 (342)
-+||++|+|++|+... .++++ .+++.+.+|+. .|+-.+.+...+- +.
T Consensus 34 ~~fVAiDtEFpGvv~rp~~~~~~t~d~~Y~~lr~nvd~l~iIQl--GLt~f~~~g~~p~~~~~wqFNF~f~~~~d~~~~~ 111 (285)
T 4gmj_B 34 YNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQL--GLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQD 111 (285)
T ss_dssp CCEEEEEEECCCCCCCCTTCCTTSTTHHHHHHHHHHTTSCCCEE--EEEEECTTSCCCSSCCEEEEEBCCCTTTSCCCHH
T ss_pred CCEEEEEEEecCccCCCCCccCCCHHHHHHHHHHHHHhhcceeE--EEEeeccCCCcCCCeeEEEEEEEeccccccccHH
Confidence 3599999999996421 12333 45666666543 2444444443211 11
Q ss_pred ccc---cCCCCHhhh-cCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc---------------
Q 019380 173 RYE---VTGLTEEDI-KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR--------------- 233 (342)
Q Consensus 173 ~~~---i~GIt~e~l-~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~--------------- 233 (342)
+.. -+||.=... .++.+..+..+.+.. .-.++ ..+..+|.|+..+|+.+|-
T Consensus 112 SI~fL~~~G~DF~k~~~~GI~~~~f~ell~~----sglvl------~~~v~WvtfH~~yDf~yL~k~lt~~~LP~~~~eF 181 (285)
T 4gmj_B 112 SIELLTTSGIQFKKHEEEGIETQYFAELLMT----SGVVL------CEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDF 181 (285)
T ss_dssp HHHHHHHHTCCHHHHHHHCBCHHHHHHHHHT----SSSSS------CTTCEEEESSCHHHHHHHHHHHHTSCCCSSHHHH
T ss_pred HHHHHHHcCCCHHHHHHcCCCHHHHHHHHHH----hHHHh------cCCCceEEecchhhHHHHHHHHhCCCCCCCHHHH
Confidence 111 156654443 245555443333322 11111 2556777777779998876
Q ss_pred -----ccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhh
Q 019380 234 -----MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 298 (342)
Q Consensus 234 -----~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~ 298 (342)
.-+|. +.|+..+.+.... .+-+|++||+.+ |++--+..|.|-.|+..|+.+|.++++..-
T Consensus 182 ~~~l~~~FP~--vYD~K~l~~~~~~--l~ggL~~lA~~L-~v~r~g~~HqAGsDSllT~~~F~kl~~~~f 246 (285)
T 4gmj_B 182 FEILRLFFPV--IYDVKYLMKSCKN--LKGGLQEVAEQL-ELERIGPQHQAGSDSLLTGMAFFKMREMFF 246 (285)
T ss_dssp HHHHHHHCSC--EEEHHHHGGGSTT--CCSCHHHHHHHT-TCCCCSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCch--hhhHHHHHHhccc--cCChHHHHHHhC-CCCCCCCCCcchhHHHHHHHHHHHHHHHHh
Confidence 11343 7888888776643 346899999998 988444489999999999999999988753
No 327
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.86 E-value=7.4e-06 Score=51.24 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=27.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|...+.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 14 ECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp ECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred ECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 3688999999999999999999999999874
No 328
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.86 E-value=8.2e-06 Score=45.01 Aligned_cols=26 Identities=31% Similarity=0.581 Sum_probs=23.6
Q ss_pred cccccccccccCCHHHHHHHHhhhccCC
Q 019380 14 RHKCVACYKQFKRKDHLIEHMKISYHSV 41 (342)
Q Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~~~H~~ 41 (342)
||+|+.|++.|..+..|..|+++ |++
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~--h~~ 26 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRV--HKN 26 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGG--TCC
T ss_pred CccCCCCCCcCCCHHHHHHHHHH--cCC
Confidence 69999999999999999999999 765
No 329
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.86 E-value=5.6e-06 Score=46.96 Aligned_cols=28 Identities=43% Similarity=0.714 Sum_probs=25.3
Q ss_pred CcccccccccccCCHHHHHHH-HhhhccCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEH-MKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H-~~~~~H~~~ 42 (342)
+||+|+.|++.|.++..|..| +++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~--H~~~ 29 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKI--HSGN 29 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTT--SCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHH--ccCC
Confidence 589999999999999999999 688 8765
No 330
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=97.86 E-value=8.2e-06 Score=47.84 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=26.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~ 108 (342)
.|+.|++.|...++|..|+++|.+++++.
T Consensus 4 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~ 32 (33)
T 1rim_A 4 ACPECPKRFMRSDHLSKHITLHELLGEER 32 (33)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred cCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence 47899999999999999999999999874
No 331
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.86 E-value=3.8e-06 Score=47.11 Aligned_cols=28 Identities=39% Similarity=0.750 Sum_probs=25.6
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCC
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
+||+|+.|++.|.....|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLKI--HIAD 28 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHHH--HHSC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH--hccC
Confidence 589999999999999999999999 7654
No 332
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.86 E-value=9e-06 Score=50.27 Aligned_cols=31 Identities=16% Similarity=0.430 Sum_probs=27.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|+++|..++.|..|+++|.+++++.|.
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2yte_A 12 SCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42 (42)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred ECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 4688999999999999999999999998874
No 333
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=9.1e-06 Score=50.90 Aligned_cols=31 Identities=19% Similarity=0.398 Sum_probs=27.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|...+.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 14 ECSKCQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp ECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred ECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 3688999999999999999999999999874
No 334
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=97.84 E-value=8.8e-06 Score=50.31 Aligned_cols=30 Identities=33% Similarity=0.544 Sum_probs=27.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|++.|..++.|..|+++|.+++|+.|
T Consensus 13 ~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 13 LCGQCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred ECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 368899999999999999999999999876
No 335
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=8.9e-06 Score=51.52 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=28.5
Q ss_pred cccccccccCChhhHHHHHhhcCC-CCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSL-SAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~-~~~~~~~~ 111 (342)
.|+.|+++|...+.|..|+++|.+ ++++.|++
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 14 KCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred ECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 368899999999999999999999 99999863
No 336
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.83 E-value=7.7e-06 Score=51.83 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|++++++.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoz_A 14 SCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45 (46)
T ss_dssp EETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred ECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 36889999999999999999999999999874
No 337
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.82 E-value=9.1e-06 Score=50.33 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=26.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|+++|..++.|..|+++|.+++|+.|
T Consensus 13 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 13 PCEICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred ECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 368889999999999999999999999876
No 338
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.82 E-value=9.4e-06 Score=51.32 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=28.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|..++.|..|+++|.+++++.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq3_A 14 ECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45 (46)
T ss_dssp EETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred ECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999873
No 339
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.82 E-value=8.8e-06 Score=51.57 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=28.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|..++.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yto_A 14 KCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred ECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence 3688999999999999999999999999987
No 340
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=97.81 E-value=1e-06 Score=60.23 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=25.7
Q ss_pred HHHHhhhccCCCCC-ccccCccccCChhhhh-hhc-CCCcccCCCCCcc
Q 019380 31 IEHMKISYHSVHQP-KCAVCQKLSKSFESLR-EHL-TGPLSKAHCSGIF 76 (342)
Q Consensus 31 ~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~-~H~-~~~~~C~~C~k~f 76 (342)
..|+++ |+++++ .|..|++.|.....|. .|. .++|.|+.|++.|
T Consensus 3 ~~h~~~--H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f 49 (62)
T 1vd4_A 3 ETDERD--STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEV 49 (62)
T ss_dssp CCCSSS--CCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBC
T ss_pred hhHHHH--cCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCcc
Confidence 346666 777776 7777777777766654 121 3455554444433
No 341
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=1.1e-05 Score=50.57 Aligned_cols=31 Identities=16% Similarity=0.379 Sum_probs=27.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|..++.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2yu5_A 14 KCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44 (44)
T ss_dssp ECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred ECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence 3688999999999999999999999998874
No 342
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.02 E-value=2.7e-06 Score=46.78 Aligned_cols=24 Identities=25% Similarity=0.524 Sum_probs=22.9
Q ss_pred CcccccccccccCCHHHHHHHHhh
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
|||+|+.|++.|..+..|..|+++
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 589999999999999999999998
No 343
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=97.80 E-value=8.3e-06 Score=57.44 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=34.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|.....|..|+++|++++++.|+.|++...
T Consensus 19 ~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~ 56 (74)
T 2lce_A 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFN 56 (74)
T ss_dssp CCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEES
T ss_pred ECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhC
Confidence 47889999999999999999999999999999987644
No 344
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.80 E-value=1.7e-05 Score=55.01 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=27.0
Q ss_pred cccccccCChhhHHHHH-hhcCCCCCCCCcc
Q 019380 82 NLCMNIFDSPSSLIKHK-EACSLSAPVPFKI 111 (342)
Q Consensus 82 ~~C~k~F~~~~~L~~H~-~~h~~~~~~~~~~ 111 (342)
+.|+++|.++++|.+|+ ++|++++|+.|..
T Consensus 33 ~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~ 63 (73)
T 1x3c_A 33 QGCFAAFTIQQNLILHYQAVHKSDLPAFSAE 63 (73)
T ss_dssp TTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred CCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence 45999999999999998 6899999999875
No 345
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.79 E-value=1.3e-05 Score=51.11 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=29.2
Q ss_pred cc--ccccccCChhhHHHHHhhcCCCCCCCCccc
Q 019380 81 CN--LCMNIFDSPSSLIKHKEACSLSAPVPFKIS 112 (342)
Q Consensus 81 C~--~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c 112 (342)
|. .|++.|..++.|..|+++|.+++|+.|+.|
T Consensus 15 C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 48 (48)
T 2ent_A 15 CTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG 48 (48)
T ss_dssp CCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred CCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 55 799999999999999999999999999876
No 346
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.76 E-value=8.7e-06 Score=51.58 Aligned_cols=32 Identities=25% Similarity=0.207 Sum_probs=28.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKI 111 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~ 111 (342)
.|+.|++.|...+.|..|+++|.+++++.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emz_A 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 46889999999999999999999999999873
No 347
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.75 E-value=1.8e-05 Score=56.16 Aligned_cols=36 Identities=31% Similarity=0.570 Sum_probs=32.2
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhhhccCCCCC-cc
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C 46 (342)
.++++||+|+.|++.|..+..|..|+++ |+++++ .|
T Consensus 41 h~~~~~~~C~~C~~~f~~~~~L~~H~~~--H~~~~p~~C 77 (77)
T 2cot_A 41 HTGEKPYKCDECGKAFIQRSHLIGHHRV--HTGSGPSSG 77 (77)
T ss_dssp TCCSCSEECSSSCCEESSHHHHHHHGGG--SCCCCCCCC
T ss_pred cCCCcCeeCCCCCCccCCHHHHHHHHHH--hCCCCCCCC
Confidence 3578899999999999999999999999 888876 55
No 348
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.75 E-value=9.6e-06 Score=50.19 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=26.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|+++|...+.|..|+++|.+++|+.|
T Consensus 13 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 13 KCETCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp ECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred eCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 367889999999999999999999999876
No 349
>3saf_A Exosome component 10; exoribonuclease, RNA exosome, hydrolase; 2.50A {Homo sapiens} PDB: 3sag_A 3sah_A 2cpr_A
Probab=97.74 E-value=8e-05 Score=70.76 Aligned_cols=83 Identities=22% Similarity=0.268 Sum_probs=64.1
Q ss_pred CCCeEEEeeCchhhhhhcc--ccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCC---------------C
Q 019380 215 GKARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV---------------H 277 (342)
Q Consensus 215 ~~~~~lvgh~~~~D~~~l~--~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~---------------H 277 (342)
+.+.+-||||+.+|+.+|. .......++||+..+..+.+. +++|+.|++.|||+.+..+. .
T Consensus 180 dp~i~KV~H~~k~Dl~~L~~~~Gi~~~~~fDT~lAa~lL~~~--~~gL~~Lv~~~Lg~~l~K~~~~sdW~~rpLs~~q~~ 257 (428)
T 3saf_A 180 DPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLG--RHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLS 257 (428)
T ss_dssp CTTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHTTCS--CCSHHHHHHHHHCCCCCCTTTTSCTTCSSCCHHHHH
T ss_pred CCCceEEEeehHHHHHHHHHHcCCCcCceeechhHHHHhCCC--CCCHHHHHHHHcCCCCCccccccccccCCCCHHHHH
Confidence 3566889999999999995 333234488999877776543 58999999999999876541 2
Q ss_pred CcHHHHHHHHHHHHHHHhhhhh
Q 019380 278 DPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 278 ~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
-|..||..+..||..+..+..+
T Consensus 258 YAA~DA~~ll~L~~~L~~~L~~ 279 (428)
T 3saf_A 258 YARDDTHYLLYIYDKMRLEMWE 279 (428)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 2568999999999999887654
No 350
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.74 E-value=1.1e-05 Score=57.45 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=33.0
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (342)
.++||+.|+.|++.|. ...|..|+ . |.+.++ .|..|++.|.. ..|..|+
T Consensus 13 c~~r~~~C~~C~~~~~-~~~L~~H~-~--~c~~~~~~C~~C~~~~~~-~~l~~H~ 62 (75)
T 2d9k_A 13 CPLRLAVCQHCDLELS-ILKLKEHE-D--YCGARTELCGNCGRNVLV-KDLKTHP 62 (75)
T ss_dssp CCCCCEECSSSCCEEC-HHHHHHHH-H--HHHHCEEECSSSCCEEET-TGGGTHH
T ss_pred CCCcccCCcccChHhh-HHHHHHHH-h--HcCCCceEcccCCCcCcH-HHHHHHH
Confidence 5778888888888884 77888888 6 666665 56656555442 4455453
No 351
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.70 E-value=1.2e-05 Score=50.36 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=27.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|...+.|..|+++|.+++|+.|.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eox_A 14 NCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44 (44)
T ss_dssp EETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred ECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 3688999999999999999999999998873
No 352
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.69 E-value=1.1e-05 Score=50.99 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=28.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFK 110 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~ 110 (342)
.|+.|++.|...+.|..|+++|.+++++.|+
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en3_A 14 QCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44 (46)
T ss_dssp ECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred eCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3688999999999999999999999999986
No 353
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.69 E-value=2.4e-05 Score=49.01 Aligned_cols=30 Identities=27% Similarity=0.260 Sum_probs=26.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|++.|...+.|..|+++|.+++|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~ 43 (44)
T 2epv_A 14 ECNECGKAFIWKSLLIVHERTHAGVSGPSS 43 (44)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred ECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence 368899999999999999999999999876
No 354
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=97.68 E-value=2.2e-05 Score=47.66 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=27.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
.|+.|++.|...+.|..|+++|.+++++.+
T Consensus 8 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~ 37 (39)
T 1njq_A 8 TCSFCKREFRSAQALGGHMNVHRRDRARLR 37 (39)
T ss_dssp ECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence 478899999999999999999999999864
No 355
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.61 E-value=8.6e-06 Score=52.06 Aligned_cols=32 Identities=25% Similarity=0.578 Sum_probs=28.4
Q ss_pred CCCCCccccc--ccccccCCHHHHHHHHhhhccCCC
Q 019380 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 9 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
.++++||+|+ .|++.|..++.|..|+++ |+++
T Consensus 13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~--H~~e 46 (47)
T 1ncs_A 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQT--HLED 46 (47)
T ss_dssp EETTTEEECCCTTCCCEECSSSSHHHHHHH--HTTT
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHH--ccCC
Confidence 3578999995 799999999999999999 8765
No 356
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.60 E-value=3.1e-05 Score=43.26 Aligned_cols=27 Identities=30% Similarity=0.508 Sum_probs=24.7
Q ss_pred Cccccc--ccccccCCHHHHHHHHhhhccCC
Q 019380 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSV 41 (342)
Q Consensus 13 ~~~~C~--~C~k~f~~~~~L~~H~~~~~H~~ 41 (342)
+||+|+ .|++.|..++.|..|+++ |++
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~--H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKI--HTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGG--GTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHH--hCC
Confidence 589999 999999999999999999 763
No 357
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.55 E-value=4e-05 Score=45.02 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=23.8
Q ss_pred cccccccccCChhhHHHHHhhcCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
.|+.|++.|..++.|..|++.|++++|
T Consensus 9 ~C~~C~k~f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 9 VCALCLKKFVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred ECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence 478899999999999999999998764
No 358
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=97.52 E-value=7e-06 Score=47.72 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=25.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
.|+.|+++|..+++|..|+++|.+++|+
T Consensus 4 ~C~~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 4 ACPACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp SSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence 4789999999999999999999999875
No 359
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.48 E-value=5.8e-05 Score=41.37 Aligned_cols=25 Identities=28% Similarity=0.522 Sum_probs=21.8
Q ss_pred cccccccccCChhhHHHHHhhcCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLS 104 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~ 104 (342)
.|+.|++.|..++.|..|+++|.++
T Consensus 3 ~C~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 3 KCGLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp BCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred cCCCCCCcCCCHHHHHHHHHHcCCC
Confidence 4789999999999999999998763
No 360
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=97.46 E-value=6.4e-05 Score=44.17 Aligned_cols=27 Identities=15% Similarity=0.471 Sum_probs=23.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
.|+.|++.|...+.|..|+++|.+++|
T Consensus 9 ~C~~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 9 VCRICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred eCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence 468899999999999999999998764
No 361
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.45 E-value=6.2e-05 Score=42.18 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=24.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
.|+.|++.|...+.|..|+++|+++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~h~~~~~ 30 (30)
T 1klr_A 4 QCQYCEFRSADSSNLKTHIKTKHSKEK 30 (30)
T ss_dssp CCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred cCCCCCCccCCHHHHHHHHHHHccCCC
Confidence 478999999999999999999998753
No 362
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.45 E-value=5e-05 Score=45.30 Aligned_cols=27 Identities=15% Similarity=0.358 Sum_probs=23.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
.|+.|++.|..+++|..|+++|++++|
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 11 SCPVCEKSFSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp EETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence 468899999999999999999998764
No 363
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.44 E-value=0.00016 Score=53.11 Aligned_cols=52 Identities=15% Similarity=0.056 Sum_probs=40.8
Q ss_pred CcccCCCCCcccCCcccccccccCChhhHHHHHhh-cCCCCC--------CCCcccccccc
Q 019380 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-CSLSAP--------VPFKISGAIDE 117 (342)
Q Consensus 66 ~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~-h~~~~~--------~~~~~c~~~~~ 117 (342)
.+.|......+....|+.|++.|.....|..|++. |.++++ +.|+.|++...
T Consensus 13 ~~~c~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~ 73 (95)
T 2ej4_A 13 ELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73 (95)
T ss_dssp CCCCCCCCSSCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCS
T ss_pred CceeEeecCCcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccC
Confidence 45666555555555799999999999999999998 888877 78888776543
No 364
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.44 E-value=6.1e-05 Score=42.02 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=23.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...+.|..|+++|.+++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 4 ACPECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp ECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred cCCCCCchhCCHHHHHHHHHHhcCCC
Confidence 47899999999999999999998763
No 365
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=1.4e-05 Score=56.94 Aligned_cols=62 Identities=19% Similarity=0.246 Sum_probs=48.0
Q ss_pred HHHHHHhhhccCCCCC-ccccCccccCChhhhhhhc----CCCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCC
Q 019380 29 HLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (342)
Q Consensus 29 ~L~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~ 103 (342)
.|..|+.+ |.+.++ .|..|++.|. ...|..|+ .+++. |+.|++.|. ...|..|+++|.+
T Consensus 4 ~L~~H~~~--~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~------------C~~C~~~~~-~~~l~~H~~~c~~ 67 (75)
T 2d9k_A 4 GSSGHEET--ECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTEL------------CGNCGRNVL-VKDLKTHPEVCGR 67 (75)
T ss_dssp CCSCCCCC--CCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEE------------CSSSCCEEE-TTGGGTHHHHBTT
T ss_pred HHHhhCcc--cCCCcccCCcccChHhh-HHHHHHHHhHcCCCceE------------cccCCCcCc-HHHHHHHHHHccC
Confidence 35567777 888888 9999999995 88899997 44554 567888777 4789999999887
Q ss_pred CCC
Q 019380 104 SAP 106 (342)
Q Consensus 104 ~~~ 106 (342)
++.
T Consensus 68 ~~~ 70 (75)
T 2d9k_A 68 EGS 70 (75)
T ss_dssp BSS
T ss_pred CcC
Confidence 644
No 366
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.40 E-value=8.1e-05 Score=41.42 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=23.1
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...+.|..|+++|.+++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~k 29 (29)
T 1ard_A 4 VCEVCTRAFARQEHLKRHYRSHTNEK 29 (29)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhcCCC
Confidence 47899999999999999999998763
No 367
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.38 E-value=8.4e-05 Score=41.61 Aligned_cols=26 Identities=27% Similarity=0.612 Sum_probs=23.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|+++|...+.|..|++.|.+++
T Consensus 5 ~C~~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 5 QCDYCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp ECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhccCC
Confidence 47889999999999999999998763
No 368
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.32 E-value=8.6e-05 Score=41.19 Aligned_cols=26 Identities=19% Similarity=0.337 Sum_probs=23.1
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...+.|..|+++|++++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~ 29 (29)
T 2m0e_A 4 KCPHCDKKFNQVGNLKAHLKIHIADG 29 (29)
T ss_dssp CCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhccCC
Confidence 47899999999999999999998763
No 369
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.32 E-value=7.7e-05 Score=41.46 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=23.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|.....|..|+++|.+++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 4 KCRECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp ECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred cCCCCCCccCChhHHHHHHHHhcCCC
Confidence 47889999999999999999998764
No 370
>2e6m_A Werner syndrome ATP-dependent helicase homolog; APO form, hydrolase; 2.00A {Mus musculus} PDB: 2e6l_A 2fby_A 2fbv_A 2fbx_A 2fbt_A 2fc0_A*
Probab=97.31 E-value=0.00059 Score=58.24 Aligned_cols=84 Identities=18% Similarity=0.150 Sum_probs=59.5
Q ss_pred CCCeEEEeeCchhhhhhccc--cCCCcceee-ccccccccccCCCCccHHHHHHHHhCCcCCCC---------C------
Q 019380 215 GKARLLVGHGLEHDLDSLRM--NYPDHMLRD-TAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSG---------V------ 276 (342)
Q Consensus 215 ~~~~~lvgh~~~~D~~~l~~--~~~~~~~~D-t~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~---------~------ 276 (342)
+.+.+.||||+.+|+..|.. ......++| ++.....+.+ ...++|+.|+..|+|..+..+ .
T Consensus 94 d~~i~Kv~~~~k~D~~~L~~~~gi~~~~~fDlt~lAayll~~-~~~~~L~~L~~~~l~~~~~K~k~~~~s~W~~~~L~~~ 172 (208)
T 2e6m_A 94 NKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKC-AETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTED 172 (208)
T ss_dssp CTTSEEEESSHHHHHHHHHHHHCCCCCSEEEHHHHHHHHTTC-CCCCCHHHHHHHHHSCBCCCCHHHHTSCTTSSSCCHH
T ss_pred CCCceEEEEeeHHHHHHHHHHCCCCCCCEEEHHHHHHHHccC-CCChhHHHHHHHHcCCCcCCCCCeeeCCCCCCCCCHH
Confidence 35678999999999999973 332233889 5554444444 467999999999988775321 0
Q ss_pred --CCcHHHHHHHHHHHHHHHhhhhh
Q 019380 277 --HDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 277 --H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
.-|..||.++..|+..+..+..+
T Consensus 173 q~~YAa~Da~~~~~L~~~L~~~L~~ 197 (208)
T 2e6m_A 173 QKLYAATDAYAGLIIYQKLGNLGDT 197 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhccch
Confidence 12568999999999999888655
No 371
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.30 E-value=4e-05 Score=56.27 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=31.5
Q ss_pred cccccccccCChhhHHHHHhhcCCCCCCCCcccccccc
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDE 117 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~ 117 (342)
.|+.|++.|..++.|..|+++|.+++|+.|..|.....
T Consensus 27 ~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~~ 64 (88)
T 1x6f_A 27 QCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQ 64 (88)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCCC
T ss_pred cCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHHH
Confidence 36788888999999999999999999999887765544
No 372
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.27 E-value=0.00013 Score=43.03 Aligned_cols=26 Identities=27% Similarity=0.475 Sum_probs=22.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|..+..|..|+++|.+++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 11 LCDMCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred ecCcCCCCcCchHHHHHHHHHhcCCC
Confidence 47889999999999999999998764
No 373
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.26 E-value=0.00015 Score=41.20 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=21.2
Q ss_pred ccccccCChhhHHHHHhhcCCCC
Q 019380 83 LCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 83 ~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.||++|...+.|..|+++|.+++
T Consensus 9 ~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 9 YCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp TCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCCcccCCHhHHHHHHHHhcCCC
Confidence 89999999999999999998764
No 374
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=97.24 E-value=0.0024 Score=59.93 Aligned_cols=159 Identities=13% Similarity=0.108 Sum_probs=91.6
Q ss_pred CCCcceeccccccccc-CCCc---ccccceEEeecCCCCe--EEeeecCCCCCccccc---------cccCCCCHh---h
Q 019380 122 RGPKAVAMDCEMVGGG-SNGT---LDLCARVCLVDEDENV--IFHTYVQPQLPVTNYR---------YEVTGLTEE---D 183 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~-~~~~---~~il~~v~vv~~~~~~--~~~~lv~p~~~i~~~~---------~~i~GIt~e---~ 183 (342)
+..++++||+||++.+ ++.. .++ ..+++++..+.. +|.-+-.|.....++. ..+..-.+. .
T Consensus 104 p~l~vlsfDIEt~~~~fP~~~~~~d~I-i~Is~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 182 (388)
T 1noy_A 104 KFVRVANCDIEVTGDKFPDPMKAEYEI-DAITHYDSIDDRFYVFDLLNSMYGSVSKWDAKLAAKLDCEGGDEVPQEILDR 182 (388)
T ss_dssp GGCCEEEEEEEECCSSCCCTTTCCSCE-EEEEEEETTTTEEEEEEECCCSSCCCCCCCHHHHHSCGGGTCCCCCHHHHTT
T ss_pred CCeEEEEEEEEeCCCCCCCCCCCCCeE-EEEEEEEecCCeEEEEEEeeccCCCCCccccccccccccccccccccccCCC
Confidence 5567899999999721 2221 233 566666565543 2322222222111110 011111111 1
Q ss_pred --hcCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc----c--c---------CCC-------
Q 019380 184 --IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR----M--N---------YPD------- 238 (342)
Q Consensus 184 --l~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~----~--~---------~~~------- 238 (342)
+...++..+++.+|.+++... ...+|+|||+ .||+.+|. . . ++.
T Consensus 183 v~v~~~~~E~~LL~~f~~~i~~~-----------dPDii~GyN~~~FDlpyL~~Ra~~~lg~~l~~~~s~~~r~~~~~~~ 251 (388)
T 1noy_A 183 VIYMPFDNERDMLMEYINLWEQK-----------RPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSPIGRVKSKLLQ 251 (388)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHS-----------CCSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGSTTSCEEEEECC
T ss_pred eEEEEcCCHHHHHHHHHHHHHHh-----------CCcEEEecCCCCccHHHHHHHHHHHcCCccccccCcccccccccCh
Confidence 124567889999999999543 2359999997 67998865 1 1 110
Q ss_pred -------------cceeecccccccc-ccCCCCccHHHHHHHHhCCcCCCCCCC----------------cHHHHHHHHH
Q 019380 239 -------------HMLRDTAKYRPLM-KTNLVSHSLKYLTRTYLGYDIQSGVHD----------------PYEDCVSVMR 288 (342)
Q Consensus 239 -------------~~~~Dt~~l~~~~-~~~~~~~~L~~l~~~~~~~~~~~~~H~----------------A~~Da~~t~~ 288 (342)
..++|+..+.+.. +....+++|+.+|..+||.. ....+. .+.||..|++
T Consensus 252 ~~~g~~~~~~i~GR~~lD~~~~~k~~~~~~l~sysL~~Va~~~Lg~~-K~d~~~~i~~~~~~~~~~l~~Y~~~D~~l~~~ 330 (388)
T 1noy_A 252 NMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKG-KLPYDGPINKLRETNHQRYISYNIIDVESVQA 330 (388)
T ss_dssp GGGCSCEEEEETTSEECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCC-CCCCSSCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCcceEEEcCeEEeEHHHHHhhcCcCcccCCCHHHHHHHHhCCC-CCCcHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 0144555544442 32267899999999998886 332212 3669999999
Q ss_pred HHHHH
Q 019380 289 LYKRF 293 (342)
Q Consensus 289 l~~~~ 293 (342)
|+.++
T Consensus 331 L~~kl 335 (388)
T 1noy_A 331 IDKIR 335 (388)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99884
No 375
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=97.24 E-value=8.6e-05 Score=44.67 Aligned_cols=18 Identities=44% Similarity=0.741 Sum_probs=9.1
Q ss_pred ccccccccCChhhHHHHH
Q 019380 81 CNLCMNIFDSPSSLIKHK 98 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~ 98 (342)
|++||++|.++++|++|+
T Consensus 11 C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 11 CLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp ETTTTEECSCHHHHHHHH
T ss_pred CCCCCCccCCHhHccCcC
Confidence 344555555555555554
No 376
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.33 E-value=4.6e-05 Score=42.66 Aligned_cols=26 Identities=31% Similarity=0.497 Sum_probs=22.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...++|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2lvt_A 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29 (29)
Confidence 47889999999999999999998753
No 377
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.21 E-value=0.00016 Score=42.76 Aligned_cols=26 Identities=15% Similarity=0.256 Sum_probs=22.0
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|..++.|..|+++|.+++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 11 DCHICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred ECCCCCCccCCHHHHHHHHHHhcCCC
Confidence 36888999999999999999988753
No 378
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.20 E-value=0.00015 Score=42.81 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=22.6
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...+.|..|+++|.+++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 11 TCEYCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred ECCCCCceeCCHHHHHHHHHHhCCCC
Confidence 36889999999999999999998763
No 379
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.19 E-value=0.00016 Score=39.98 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=21.0
Q ss_pred cccccccccCChhhHHHHHhhcCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSL 103 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~ 103 (342)
.|+.|++.|...+.|..|+++|++
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 5 SCSVCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp ECSSSCCEESCHHHHHHHHTTSCC
T ss_pred cCCCCCcccCCHHHHHHHHHhcCC
Confidence 478899999999999999998864
No 380
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.17 E-value=0.00018 Score=42.45 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=22.2
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...+.|..|+++|.+++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 11 KCPQCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp ECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCCcccCCHHHHHHHHHHccCCC
Confidence 36889999999999999999998763
No 381
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.16 E-value=0.00025 Score=40.57 Aligned_cols=26 Identities=31% Similarity=0.543 Sum_probs=22.7
Q ss_pred ccc--ccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCN--LCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~--~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+ .|++.|...+.|..|+++|.+++
T Consensus 5 ~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 5 SCDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred cCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 366 89999999999999999998764
No 382
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.14 E-value=0.00021 Score=40.01 Aligned_cols=26 Identities=31% Similarity=0.569 Sum_probs=22.4
Q ss_pred cccccccccCChhhHHHH-HhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKH-KEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H-~~~h~~~~ 105 (342)
.|+.|++.|...+.|..| +++|.+++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~~H~~~~ 30 (30)
T 1paa_A 4 ACGLCNRAFTRRDLLIRHAQKIHSGNL 30 (30)
T ss_dssp BCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred CCcccCcccCChHHHHHHHHHHccCCC
Confidence 478899999999999999 78888753
No 383
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.14 E-value=0.00018 Score=43.11 Aligned_cols=28 Identities=21% Similarity=0.351 Sum_probs=24.8
Q ss_pred ccc--ccccccCChhhHHHHHhhcCCCCCC
Q 019380 80 GCN--LCMNIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 80 ~C~--~C~k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
.|+ .|+++|...+.|.+|+++|.+++++
T Consensus 8 ~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~ 37 (38)
T 1bhi_A 8 LCTAPGCGQRFTNEDHLAVHKHKHEMTLKF 37 (38)
T ss_dssp ECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred ECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence 356 5999999999999999999998876
No 384
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=96.20 E-value=7e-05 Score=42.08 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=22.2
Q ss_pred cccccccccCChhhHHHHHhhcCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLS 104 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~ 104 (342)
.|+.|++.|...+.|..|+++|+++
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~h~~~ 29 (30)
T 2lvr_A 5 VCIHCQRQFADPGALQRHVRIHTGE 29 (30)
Confidence 4788999999999999999999865
No 385
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.12 E-value=0.00023 Score=42.03 Aligned_cols=26 Identities=31% Similarity=0.393 Sum_probs=22.1
Q ss_pred cccccccccCChhhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|...+.|..|+++|.+++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 11 KCSLCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp ECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred cCCCCCchhCCHHHHHHHHHHhccCC
Confidence 36889999999999999999998753
No 386
>1qht_A Protein (DNA polymerase); archaea, hyperthermostable, family B polymer alpha family polymerase, transferase; 2.10A {Thermococcus SP} SCOP: c.55.3.5 e.8.1.1 PDB: 1tgo_A 2xhb_A* 2vwj_A* 2vwk_A* 1wns_A* 1wn7_A 1qqc_A* 4ahc_A* 4ail_C* 3a2f_A* 2jgu_A* 1d5a_A
Probab=97.09 E-value=0.0018 Score=66.19 Aligned_cols=147 Identities=12% Similarity=0.078 Sum_probs=89.6
Q ss_pred CCCcceeccccccccc-CCCcccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHH
Q 019380 122 RGPKAVAMDCEMVGGG-SNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEI 200 (342)
Q Consensus 122 ~~~~~v~~D~Ettg~~-~~~~~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~~~~ 200 (342)
+..++++||+||+|.. ++.....+..++.++.++..++.. . .|..+.+...++..+++.+|.++
T Consensus 133 ~~l~ilsfDIEt~~~~~p~~~~d~Ii~Is~~~~~~~~~~t~--~-------------~i~~~~v~~~~~E~~LL~~f~~~ 197 (775)
T 1qht_A 133 EELTMLAFAIATLYHEGEEFGTGPILMISYADGSEARVITW--K-------------KIDLPYVDVVSTEKEMIKRFLRV 197 (775)
T ss_dssp CCCCEEEEEEEECCCTTCCTTCSCEEEEEEECSSCEEEEES--S-------------CCCCSSEEECSCHHHHHHHHHHH
T ss_pred CCcEEEEEEEEEcCCCCCCCCCCcEEEEEEEecCCCeeEee--c-------------cccccceEEcCCHHHHHHHHHHH
Confidence 4678999999999832 221122224555544444333211 1 12223455677889999999999
Q ss_pred HhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc-----ccCC------------------------Ccceeeccccccc
Q 019380 201 LNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNYP------------------------DHMLRDTAKYRPL 250 (342)
Q Consensus 201 l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~~------------------------~~~~~Dt~~l~~~ 250 (342)
|... .-.+|||||+ .||+.+|. +..+ -...+|+..+.+.
T Consensus 198 i~~~-----------dPDiivGyN~~~FDlpyL~~Ra~~~gi~~~lgR~~~~~~~~~~g~~~~~~i~Gr~~lDl~~~~k~ 266 (775)
T 1qht_A 198 VREK-----------DPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRR 266 (775)
T ss_dssp HHHH-----------CCSEEEESSTTTTHHHHHHHHHHHTTCCCCCSTTSCCCEEEEETTEEEEECTTSEEEEHHHHHHH
T ss_pred HHhc-----------CCCEEEEeCCCCccHHHHHHHHHHcCCCcccccCCCcCceeecCceeeEEecCeEEEEHHHHHHH
Confidence 9432 1249999996 57999877 1111 1224465554444
Q ss_pred cccCCCCccHHHHHHHHhCCcCCCCC------------------CCcHHHHHHHHHHHHHHHh
Q 019380 251 MKTNLVSHSLKYLTRTYLGYDIQSGV------------------HDPYEDCVSVMRLYKRFRR 295 (342)
Q Consensus 251 ~~~~~~~~~L~~l~~~~~~~~~~~~~------------------H~A~~Da~~t~~l~~~~~~ 295 (342)
.. ...+++|+.+|..+||.....-. .-.+.||..|..|+.+++.
T Consensus 267 ~~-~l~sysL~~Va~~~Lg~~K~dv~~~~i~~~~~~~~~l~~l~~Y~~~Da~lt~~L~~~~~~ 328 (775)
T 1qht_A 267 TI-NLPTYTLEAVYEAVFGKPKEKVYAEEIAQAWESGEGLERVARYSMEDAKVTYELGREFFP 328 (775)
T ss_dssp HS-CCSCCCHHHHHHHHHCCCCCCCCHHHHHHHHTTTCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hc-CcCcCCHHHHHHHHhCCCCCccCHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 32 44689999999988898633211 1125699999999877653
No 387
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.09 E-value=0.00022 Score=39.01 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=20.2
Q ss_pred cccccccccCChhhHHHHHhhcC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
.|+.||+.|...+.|..|+++|+
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 5 SCSLCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp ECSSSSCEESSHHHHHHHHHHCC
T ss_pred cCCCcChhhCCHHHHHHHHHHcc
Confidence 47889999999999999998874
No 388
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.07 E-value=0.00023 Score=43.32 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=21.2
Q ss_pred ccc--cccccCChhhHHHHHhhcCCC
Q 019380 81 CNL--CMNIFDSPSSLIKHKEACSLS 104 (342)
Q Consensus 81 C~~--C~k~F~~~~~L~~H~~~h~~~ 104 (342)
|+. |+++|..+++|.+|+++|.++
T Consensus 12 C~~~~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 12 CPTDGCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp CSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 554 999999999999999999875
No 389
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.06 E-value=0.00019 Score=39.43 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=20.0
Q ss_pred cccccccccCChhhHHHHHhhcC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
.|+.||+.|...+.|..|+++|+
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 5 RCPLCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp EETTTTEEESCHHHHHHHHTTCC
T ss_pred CCCCCCcccCCHHHHHHHHHhcC
Confidence 47889999999999999998874
No 390
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=97.02 E-value=0.00035 Score=41.39 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=19.7
Q ss_pred cccccccccCChhhHHHHHhhcCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLS 104 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~ 104 (342)
.|+.|++.|..++.|..|+++|.++
T Consensus 13 ~C~~C~k~f~~~~~l~~H~~~H~~~ 37 (37)
T 1p7a_A 13 QCPDCDRSFSRSDHLALHRKRHMLV 37 (37)
T ss_dssp CCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred cCCCCCcccCcHHHHHHHHHHhccC
Confidence 3577888888888888888888763
No 391
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase-RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=97.02 E-value=0.0015 Score=62.12 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=69.4
Q ss_pred hhcCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc-------------------ccCCCcceee
Q 019380 183 DIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-------------------MNYPDHMLRD 243 (342)
Q Consensus 183 ~l~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-------------------~~~~~~~~~D 243 (342)
.+..+..|..|++.|.+ .+.+|||||.-.|+-++- --+|. ++|
T Consensus 263 ~l~~~~Gfr~V~~~L~~----------------s~KpiVGHN~llDl~~l~~~F~~pLP~~~~eFk~~i~~lFP~--i~D 324 (430)
T 2a1r_A 263 ELNDAVGFSRVIHAIAN----------------SGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPR--LLD 324 (430)
T ss_dssp HHHTTSBTHHHHHHHHH----------------HCCEEEESSCHHHHHHHHHHHTCCCCSSHHHHHHHHHHHCSS--EEE
T ss_pred HHHhhhhHHHHHHHHHh----------------CCCceEechhHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCc--eee
Confidence 45556666666666654 457999999999999766 11454 899
Q ss_pred cccccccc--ccCCCCccHHHHHHHHhCCcC-----------------CCCCCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 244 TAKYRPLM--KTNLVSHSLKYLTRTYLGYDI-----------------QSGVHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 244 t~~l~~~~--~~~~~~~~L~~l~~~~~~~~~-----------------~~~~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
|..++... .......+|..|...+...+. .+..|.|-.||.+|+.+|.++......
T Consensus 325 TK~la~~~~~~~~~~~~sL~~l~~~l~~~~~~~p~i~~~~~~~~y~~~~~~~HeAGyDa~mTG~vFi~l~~~l~~ 399 (430)
T 2a1r_A 325 TKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGS 399 (430)
T ss_dssp HHHHHTSTTTTTTCSCCSHHHHHHHTTSTTCCCCCEEECTTCCCC-----CCCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred hHHhhhccchhhccCCCCHHHHHHHHHhCCCCCCeeecCCCccccccCCCCccchHHHHHHHHHHHHHHHHHHhh
Confidence 98877543 122345789999887732211 112699999999999999999987543
No 392
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.01 E-value=0.00023 Score=42.26 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=21.6
Q ss_pred cccccccccCCh-hhHHHHHhhcCCCC
Q 019380 80 GCNLCMNIFDSP-SSLIKHKEACSLSA 105 (342)
Q Consensus 80 ~C~~C~k~F~~~-~~L~~H~~~h~~~~ 105 (342)
.|+.|++.|... +.|..|+++|.+++
T Consensus 11 ~C~~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 11 KCPYCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp ECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred ECCCCChhhccCHHHHHHHHHhcCCCC
Confidence 367888899998 99999999988753
No 393
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, struc genomics, protein structure initiative, center for eukaryot structural genomics, CESG; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A
Probab=96.99 E-value=0.00026 Score=60.54 Aligned_cols=82 Identities=20% Similarity=0.176 Sum_probs=62.0
Q ss_pred CCCeEEEeeCchhhhhhccccC--CCcceeeccccccccccC--CCCccHHHHHHHHhCCcC-CCC--------------
Q 019380 215 GKARLLVGHGLEHDLDSLRMNY--PDHMLRDTAKYRPLMKTN--LVSHSLKYLTRTYLGYDI-QSG-------------- 275 (342)
Q Consensus 215 ~~~~~lvgh~~~~D~~~l~~~~--~~~~~~Dt~~l~~~~~~~--~~~~~L~~l~~~~~~~~~-~~~-------------- 275 (342)
+.+.+-|||++.+|+..|...+ ....++|+..++....+. ..+.+|+.|++.++|+.+ +..
T Consensus 106 d~~i~Kvg~~~~~D~~~L~~~~g~~~~~~~Dl~~la~~~lg~~~~~~~gL~~Lv~~~lg~~lK~k~~~~SdW~~pLs~~Q 185 (206)
T 1vk0_A 106 SKFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQLDSIEAKWEKAGPEEQ 185 (206)
T ss_dssp CSSSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHHHTCGGGGGCCHHHHHHHHHCCCCHHHHHHHHTGGGSCHHHH
T ss_pred CCCceEEEeccHHHHHHHHHhcCCCcCCeeeHHHHHHHHcCCCCCCCccHHHHHHHHhCCcCCCCCcccCCCCCcCCHHH
Confidence 4678999999999999998332 235689998766443332 457899999999999998 210
Q ss_pred CCCcHHHHHHHHHHHHHHHhh
Q 019380 276 VHDPYEDCVSVMRLYKRFRRQ 296 (342)
Q Consensus 276 ~H~A~~Da~~t~~l~~~~~~~ 296 (342)
-+-|..||....+||.++.++
T Consensus 186 i~YAA~Da~~l~~l~~~L~~~ 206 (206)
T 1vk0_A 186 LEAAAIEGWLIVNVWDQLSDE 206 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 244788999999999998753
No 394
>3d45_A Poly(A)-specific ribonuclease PARN; CAP analogue, exonuclease, hydrolase, magnesium, metal nonsense-mediated mRNA decay, nucleus; HET: 7MG GDP; 3.00A {Mus musculus}
Probab=96.96 E-value=0.00086 Score=65.17 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=69.0
Q ss_pred hhcCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc-------------------ccCCCcceee
Q 019380 183 DIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-------------------MNYPDHMLRD 243 (342)
Q Consensus 183 ~l~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-------------------~~~~~~~~~D 243 (342)
.+..+..|..|++.|.+ .+.+|||||.-.|+.+|- .-+|. ++|
T Consensus 258 ~~~~~~Gfr~v~~~L~~----------------~~kpiVgHN~l~Dl~~l~~~F~~pLP~~~~eFk~~i~~lFP~--i~D 319 (507)
T 3d45_A 258 ELNDAVGFSRVIHAIAN----------------SGKLVVGHNMLLDVMHTIHQFYCPLPADLNEFKEMAICVFPR--LLD 319 (507)
T ss_dssp HHHHHSBTHHHHHHHHH----------------HCCEEEESSCHHHHHHHHHHHTCSCCSSHHHHHHHHHHHCSC--EEE
T ss_pred HHHhhhhHHHHHHHHHh----------------CCCeEEEechHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCc--eeE
Confidence 34444556666666654 557999999999999877 11454 899
Q ss_pred cccccccc--ccCCCCccHHHHHHHHhCC----c------------C-CCCCCCcHHHHHHHHHHHHHHHhhhh
Q 019380 244 TAKYRPLM--KTNLVSHSLKYLTRTYLGY----D------------I-QSGVHDPYEDCVSVMRLYKRFRRQDH 298 (342)
Q Consensus 244 t~~l~~~~--~~~~~~~~L~~l~~~~~~~----~------------~-~~~~H~A~~Da~~t~~l~~~~~~~~~ 298 (342)
|..++... .......+|+.|++.+-.. + . .+..|.|=.||.+|+.+|.++.....
T Consensus 320 TK~la~~~~~~~~~~~~~L~~l~~~l~~~~~~~p~i~~~~~~~~y~~~~~~~HeAGyDA~mTg~~F~kl~~~l~ 393 (507)
T 3d45_A 320 TKLMASTQPFKDIINNTSLAELEKRLKETPFDPPKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLG 393 (507)
T ss_dssp HHHHTTSTTHHHHCCCCCHHHHHHHTTSTTCCCCCEEECTTSCCCC----CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHhhhhcCccccccCCCCHHHHHHHHhccCCCCCeEEecccccccccCCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 99887652 2233467899999988311 1 0 11279999999999999999987654
No 395
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=95.96 E-value=0.00014 Score=39.46 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=19.7
Q ss_pred cccccccccCChhhHHHHHhhcC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
.|+.||+.|...+.|..|+++|.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~ 26 (26)
T 2lvu_A 4 VCERCGKRFVQSSQLANHIRHHD 26 (26)
Confidence 47889999999999999998763
No 396
>2p51_A SPCC18.06C protein; DEDD nuclease fold, hydrolase, gene regulation; 1.40A {Schizosaccharomyces pombe} PDB: 3g0z_A 3g10_A
Probab=96.81 E-value=0.012 Score=53.25 Aligned_cols=106 Identities=10% Similarity=0.091 Sum_probs=73.4
Q ss_pred CCCCHhhh-cCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc--------------------cc
Q 019380 177 TGLTEEDI-KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR--------------------MN 235 (342)
Q Consensus 177 ~GIt~e~l-~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~--------------------~~ 235 (342)
+||.=+.. .++.+..+..+.+.. +--++ .++..+|.++..+|+.+|- .-
T Consensus 130 ~G~DF~k~~~~GI~~~~F~elL~~----SGLvl------~~~V~Witfhg~YDfgyLlK~Lt~~~LP~~~~eF~~~l~~~ 199 (333)
T 2p51_A 130 SGIDFKKHQEVGIEPADFAELLIG----SGLVL------QEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKILCIY 199 (333)
T ss_dssp TTCCHHHHHHHCBCHHHHHHHHHT----TTSSS------CTTCEEEESSCHHHHHHHHHHHHCSCCCSSHHHHHHHHHHH
T ss_pred cCCChhHHHHcCCCHHHHHHHHHh----cCccc------CCCceEEEeccchhHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 56665443 356666544333332 11111 2456888988999998765 11
Q ss_pred CCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhh
Q 019380 236 YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 236 ~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~ 297 (342)
+| .+.|+..+.+.... ..-+|+.||+.+ |+.-.+..|.|-.|+..|+.+|.++++..
T Consensus 200 FP--~iYD~K~l~~~~~~--l~ggL~~lA~~L-~v~Rig~~HqAGsDSlLT~~~F~kl~~~~ 256 (333)
T 2p51_A 200 FP--KNYDIKYIMKSVLN--NSKGLQDIADDL-QIHRIGPQHQAGSDALLTARIFFEIRSRY 256 (333)
T ss_dssp SS--SEEEHHHHHTTTTC--CCCCHHHHHHHT-TCCCCSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred Cc--chhhHHHHHHHhcc--ccCCHHHHHHHc-CCCccCcchhhhhHHHHHHHHHHHHHHHh
Confidence 44 37898888877642 356899999988 88854558999999999999999999875
No 397
>1yt3_A Ribonuclease D, RNAse D; exoribonuclease, exonuclease, hydrolase, tRNA processing, hydrolase,translation; 1.60A {Escherichia coli} SCOP: a.60.8.3 a.60.8.3 c.55.3.5
Probab=96.80 E-value=0.0026 Score=59.45 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=63.7
Q ss_pred CCeEEEeeCchhhhhhcc--ccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCC---------C------
Q 019380 216 KARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVH---------D------ 278 (342)
Q Consensus 216 ~~~~lvgh~~~~D~~~l~--~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H---------~------ 278 (342)
.+.+.||||+.+|+.+|. .......+.||+..+..+.+ ..+++|+.|++.|+|..+.++.- +
T Consensus 73 ~~i~Kv~h~~k~Dl~~L~~~~Gi~~~~~fDt~lAa~lL~~-~~~~~L~~L~~~~l~~~l~K~~~~sdw~~rpL~~~q~~Y 151 (375)
T 1yt3_A 73 PSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGR-PMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEY 151 (375)
T ss_dssp TTSEEEESSCHHHHHHHHHHHSSCCSSEEEHHHHHHHTTC-CTTCCHHHHHHHHHCCCCCCTTTTSCTTSSSCCHHHHHH
T ss_pred CCceEEEeeHHHHHHHHHHHcCCCCCcEEEcHHHHHHcCC-CCChhHHHHHHHHcCCCCCCCcccCCCCCCCCCHHHHHH
Confidence 556889999999999996 33333468999987777755 35899999999998987654311 1
Q ss_pred cHHHHHHHHHHHHHHHhhhhh
Q 019380 279 PYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 279 A~~Da~~t~~l~~~~~~~~~~ 299 (342)
|..||..+..||..+..+..+
T Consensus 152 Aa~Da~~l~~L~~~L~~~L~~ 172 (375)
T 1yt3_A 152 AAADVWYLLPITAKLMVETEA 172 (375)
T ss_dssp HHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999999877654
No 398
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=96.79 E-value=0.0006 Score=46.99 Aligned_cols=27 Identities=22% Similarity=0.568 Sum_probs=23.9
Q ss_pred cccccccccCChhhHHHHHhhcCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
.|..|++.|.++++|.+|+++|+++..
T Consensus 15 ~C~~CgK~F~~~s~L~~H~r~Htg~~~ 41 (66)
T 2epp_A 15 PCGLCGKVFTDANRLRQHEAQHGVTSL 41 (66)
T ss_dssp CCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred CCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence 468899999999999999999998754
No 399
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=96.78 E-value=0.00052 Score=43.73 Aligned_cols=28 Identities=14% Similarity=0.319 Sum_probs=21.9
Q ss_pred cccccccccCChhhHHHHHh-hcCCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAPV 107 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~-~h~~~~~~ 107 (342)
.|..|++.|....+|..|++ +|.++...
T Consensus 9 ~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 9 ACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp ECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred ECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 46889999999999999999 99987665
No 400
>3pv8_A DNA polymerase I; DNA polymerase I, protein-DNA complex, thymine-adenine, CLOS conformation; HET: DNA 2DT D3T; 1.52A {Geobacillus kaustophilus} PDB: 3px0_A* 3px4_A* 3px6_A* 3thv_A* 3ti0_A* 4dse_A* 4dsf_A* 4ds4_A* 4dqp_A* 4dqi_A* 4ds5_A* 4e0d_A* 4dqr_A* 4dqq_A* 3tan_A* 3tap_A* 3taq_A* 3tar_A* 4dqs_A* 3hp6_A* ...
Probab=96.77 E-value=0.00055 Score=67.67 Aligned_cols=94 Identities=6% Similarity=0.010 Sum_probs=73.3
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc---ccCCCcceeeccccccccccCCCCccHHHHHHHHhC
Q 019380 193 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR---MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLG 269 (342)
Q Consensus 193 v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~---~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~ 269 (342)
+.+.|..++ ++.+...|+||+.+|+.+|. +..+ ..+.||+..+..+.|...+++|++|+..|+|
T Consensus 69 ~l~~Lk~lL------------ed~~i~KV~hn~K~Dl~vL~~~Gi~l~-g~~fDTmLAAYLL~p~~~~~~L~~La~~yLg 135 (592)
T 3pv8_A 69 ADPQFVAWL------------GDETKKKSMFDSKRAAVALKWKGIELC-GVSFDLLLAAYLLDPAQGVDDVAAAAKMKQY 135 (592)
T ss_dssp TCHHHHHHH------------TCTTSEEEESSHHHHHHHHHHTTCCCC-CEEEEHHHHHHHHCGGGCCCSHHHHHGGGTC
T ss_pred HHHHHHHHH------------hCCCCeEEEechHHHHHHHHHcCCCCC-CccchHHHHHHHcCCCCCCCCHHHHHHHHcC
Confidence 446688888 34667999999999999996 2222 4578999988888887778999999999998
Q ss_pred CcCCCC------------------CCCcHHHHHHHHHHHHHHHhhhhh
Q 019380 270 YDIQSG------------------VHDPYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 270 ~~~~~~------------------~H~A~~Da~~t~~l~~~~~~~~~~ 299 (342)
..+... ...|..||..+.+|+..+..+.++
T Consensus 136 ~~l~~~ee~~gkg~~~~~~~~e~~~~YAa~DA~~l~~L~~~L~~~L~e 183 (592)
T 3pv8_A 136 EAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRR 183 (592)
T ss_dssp CSSCCHHHHHCSGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHhcCccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 875321 133567999999999999877654
No 401
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=96.76 E-value=0.00059 Score=37.65 Aligned_cols=24 Identities=25% Similarity=0.430 Sum_probs=21.1
Q ss_pred ccc--ccccccCChhhHHHHHhhcCC
Q 019380 80 GCN--LCMNIFDSPSSLIKHKEACSL 103 (342)
Q Consensus 80 ~C~--~C~k~F~~~~~L~~H~~~h~~ 103 (342)
.|+ .|++.|...+.|..|+++|.+
T Consensus 4 ~C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 4 VCHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp EECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CCcCCcCcCccCCHHHHHHHHHHhCC
Confidence 367 999999999999999999864
No 402
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=96.69 E-value=0.00059 Score=40.59 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=21.4
Q ss_pred cc--ccccccCChhhHHHHHhhcCCCC
Q 019380 81 CN--LCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 81 C~--~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
|. .|++.|..++.|..|+++|.+++
T Consensus 11 C~~~~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 11 CHIQGCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp CCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 55 59999999999999999998763
No 403
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.61 E-value=0.00084 Score=39.89 Aligned_cols=25 Identities=20% Similarity=0.202 Sum_probs=20.1
Q ss_pred cccccccccCChhhHHHH-HhhcCCC
Q 019380 80 GCNLCMNIFDSPSSLIKH-KEACSLS 104 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H-~~~h~~~ 104 (342)
.|+.|+++|..++.|..| ++.|.++
T Consensus 11 ~C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 11 YCSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp ECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHHccCc
Confidence 367888888899999999 8888754
No 404
>1s5j_A DNA polymerase I; replication, disulfide bonds, transferase; HET: DNA; 2.40A {Sulfolobus solfataricus} SCOP: c.55.3.5 e.8.1.1
Probab=96.45 E-value=0.012 Score=60.74 Aligned_cols=150 Identities=16% Similarity=0.169 Sum_probs=85.6
Q ss_pred CCCCcceeccccc-ccc-c--CCCc---ccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHH
Q 019380 121 CRGPKAVAMDCEM-VGG-G--SNGT---LDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEV 193 (342)
Q Consensus 121 ~~~~~~v~~D~Et-tg~-~--~~~~---~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v 193 (342)
.+..++++||+|| ++. + ++.. ..+ ..+++++.+|...+ .++.+... +..... |....+...+...++
T Consensus 187 ~p~l~ilsfDIEt~s~~~g~fP~~~~~~d~I-i~Is~~~~~g~~~~-~~~~~~~~-~~~~~~---i~~~~v~~~~~E~~L 260 (847)
T 1s5j_A 187 IPKIKRVAIDIEVYTPVKGRIPDSQKAEFPI-ISIALAGSDGLKKV-LVLNRNDV-NEGSVK---LDGISVERFNTEYEL 260 (847)
T ss_dssp CCCCCEEEEEEEECCSSSSCCCCTTTCCSCE-EEEEEEETTSCEEE-EEECSSCC-CCCCEE---ETTEEEEEESSHHHH
T ss_pred CCCceEEEEEEEeCcCCCCCCCCccccCCcE-EEEEEEccCCCcEE-EEEeCCcc-cccccC---CCCCeEEEeCCHHHH
Confidence 4567889999999 742 1 2221 233 56666656654322 12233211 110111 122234456788999
Q ss_pred HHHHHHHHhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc-----ccC-----CC------------cceeeccccccc
Q 019380 194 KDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNY-----PD------------HMLRDTAKYRPL 250 (342)
Q Consensus 194 ~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~-----~~------------~~~~Dt~~l~~~ 250 (342)
+.+|.++|.+ .+ +|||||. .||+.+|. +.. |. ...+|...++..
T Consensus 261 L~~f~~~i~~------------~d-iivgyN~~~FDlPyL~~Ra~~lgi~~~~~p~~~~gr~~~~i~gr~~~Dl~~~~~~ 327 (847)
T 1s5j_A 261 LGRFFDILLE------------YP-IVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKFFFN 327 (847)
T ss_dssp HHHHHHHHTT------------CS-EEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHHHTS
T ss_pred HHHHHHHhcc------------CC-EEEEeCCCCchHHHHHHHHHHcCCCcccCCeeecCCCceEeccEEEeehHHHHhh
Confidence 9999999932 33 9999996 57999987 111 11 122344333221
Q ss_pred -c-----c-cCCCCccHHHHHHHHhCCcCCCCCC-------------CcHHHHHHHHHHH
Q 019380 251 -M-----K-TNLVSHSLKYLTRTYLGYDIQSGVH-------------DPYEDCVSVMRLY 290 (342)
Q Consensus 251 -~-----~-~~~~~~~L~~l~~~~~~~~~~~~~H-------------~A~~Da~~t~~l~ 290 (342)
. + ....+++|+.+|..+||.. ...-+ -.+.||..|.+|+
T Consensus 328 ~~~~~y~f~~kl~sysL~~Va~~~Lg~~-K~dv~~~i~~~~~~~l~~Ycl~Da~lt~~L~ 386 (847)
T 1s5j_A 328 KAVRNYAFEGKYNEYNLDAVAKALLGTS-KVKVDTLISFLDVEKLIEYNFRDAEITLQLT 386 (847)
T ss_dssp HHHHHHTSTTCCSSCSHHHHHHHHHCCC-CC--SSCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhccccccccccHHHHHHHHhCCC-CcchhHhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 0 1 1235899999999998876 22211 1355999999985
No 405
>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=96.35 E-value=0.0059 Score=57.70 Aligned_cols=83 Identities=19% Similarity=0.183 Sum_probs=63.3
Q ss_pred CCCeEEEeeCchhhhhhccc--cCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCC------C---C-----
Q 019380 215 GKARLLVGHGLEHDLDSLRM--NYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV------H---D----- 278 (342)
Q Consensus 215 ~~~~~lvgh~~~~D~~~l~~--~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~------H---~----- 278 (342)
+.+.+.||||+.+|+.+|.. ......+.||+..+..+.+. +++|..|++.|+|..+.++. - +
T Consensus 157 d~~i~KV~h~~k~Dl~~L~~~~Gi~~~~~fDt~lAa~LL~~~--~~~L~~L~~~~lg~~l~K~~~~sdW~~rpL~~~q~~ 234 (410)
T 2hbj_A 157 NPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGLP--RHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTA 234 (410)
T ss_dssp CTTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHHTCS--CCSHHHHHHHHSCCCCCCTTTTSCTTCSSCCHHHHH
T ss_pred CCCceEEEEehHHHHHHHHHHcCCCcCCEEEcHHHHHHhCCC--ccCHHHHHHHHcCCCCCccccccCCCCCCCCHHHHH
Confidence 35668899999999999962 33223389999877766543 69999999999988765431 1 1
Q ss_pred -cHHHHHHHHHHHHHHHhhhhh
Q 019380 279 -PYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 279 -A~~Da~~t~~l~~~~~~~~~~ 299 (342)
|..||..+..||..+..+..+
T Consensus 235 YAa~Da~~ll~L~~~L~~~L~~ 256 (410)
T 2hbj_A 235 AARADTHFLLNIYDQLRNKLIE 256 (410)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999999888655
No 406
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=96.34 E-value=0.0014 Score=41.38 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=20.9
Q ss_pred cccccccCChhhHHHHHhhcCCCC
Q 019380 82 NLCMNIFDSPSSLIKHKEACSLSA 105 (342)
Q Consensus 82 ~~C~k~F~~~~~L~~H~~~h~~~~ 105 (342)
+.|+++|..+++|+.|+++|.+++
T Consensus 24 ~~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 24 PGCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp TTCCCEECSSSSHHHHHHHHTTTC
T ss_pred CCCCCccCCHHHHHHHHHHccCCC
Confidence 369999999999999999998764
No 407
>3qex_A DNA polymerase, GP43; difluorotoluene nucleoside; HET: DNA DOC DGT; 1.73A {Enterobacteria phage RB69} PDB: 3qei_A* 3qer_A* 3qes_A* 3qet_A* 3qep_A* 3qew_A* 3qev_A* 3s9h_A* 3sq0_A* 4dtn_A* 4dto_A* 4dtp_A* 4dtr_A* 4dts_A* 4dtu_A* 4dtx_A* 4e3s_A* 4fjm_A* 4fjl_A* 3spz_A* ...
Probab=96.25 E-value=0.022 Score=58.71 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=96.2
Q ss_pred CCcceeccccccccc--CC---CcccccceEEeecCCCCeE--EeeecCCCCCcccccc---------ccCCCCHhhhcC
Q 019380 123 GPKAVAMDCEMVGGG--SN---GTLDLCARVCLVDEDENVI--FHTYVQPQLPVTNYRY---------EVTGLTEEDIKN 186 (342)
Q Consensus 123 ~~~~v~~D~Ettg~~--~~---~~~~il~~v~vv~~~~~~~--~~~lv~p~~~i~~~~~---------~i~GIt~e~l~~ 186 (342)
..+.+++|+|++.-+ ++ ...+| ..++..|..+... |+.+..|.....++.. .-..++.+.+.+
T Consensus 107 ~ir~~~~DIEv~~~~~fPd~~~~~~~I-i~It~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (903)
T 3qex_A 107 KIRVANFDIEVTSPDGFPEPSQAKHPI-DAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDK 185 (903)
T ss_dssp GSCEEEEEEECCCTTSSCCTTTCCSCC-CEEEEEETTTTEEEEEEECEETTEECCCCCHHHHHSCGGGTCCCCCHHHHTT
T ss_pred cccEEEEeEEeCCCCCCCCcccCCCCE-EEEEEEeCCCCEEEEEEeeccccccccccccccccccccccccccccccCCC
Confidence 456889999997632 22 23444 7888888866663 3344444333333322 112344454443
Q ss_pred -----CCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc-----c-c------C-CC---------
Q 019380 187 -----AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----M-N------Y-PD--------- 238 (342)
Q Consensus 187 -----~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~-~------~-~~--------- 238 (342)
.+...+++.+|.+++... .-.+|+|||+ .||+.+|. + . + +.
T Consensus 186 v~v~~f~sE~eLL~~F~~~I~~~-----------DPDIItGyN~~~FDlPYL~~RA~~l~gi~~~~~ls~~gR~~~~~~~ 254 (903)
T 3qex_A 186 IIYMPFDNEKELLMEYLNFWQQK-----------TPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIE 254 (903)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHT-----------CCSEEECSSTTTTHHHHHHHHHHHHHCHHHHGGGSTTSCEEEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHHHh-----------CCCEEEecCCccCCHHHHHHHHHHHcCCcccccccccccccccchh
Confidence 367889999999999543 2359999996 46988875 1 1 0 00
Q ss_pred -------------cceeecccccccc-ccCCCCccHHHHHHHHhCCcCCCCCCCc----------------HHHHHHHHH
Q 019380 239 -------------HMLRDTAKYRPLM-KTNLVSHSLKYLTRTYLGYDIQSGVHDP----------------YEDCVSVMR 288 (342)
Q Consensus 239 -------------~~~~Dt~~l~~~~-~~~~~~~~L~~l~~~~~~~~~~~~~H~A----------------~~Da~~t~~ 288 (342)
..++|+..+.+.. .....+++|+.+|..+||.... .-+.. +.||..+++
T Consensus 255 ~~~G~~~~~~i~GRv~lDl~~~~k~~~~~~l~SYsLd~VA~~lLg~~K~-d~~~~I~~~~~~d~~~L~~Ycl~Da~Lt~~ 333 (903)
T 3qex_A 255 NMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKL-KYDGPISKLRESNHQRYISYNIIAVYRVLQ 333 (903)
T ss_dssp ETTEEEEEEEETTCEECCHHHHHHHHSCCCCSCCCHHHHHHHHHCCCCC-CCSSCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCceeEEEeCeEEeeHHHHHHHhCccCcCCCCHHHHHHHHcCCCcc-ccHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 1134544444432 2345689999999999988733 22221 469999999
Q ss_pred HHHH
Q 019380 289 LYKR 292 (342)
Q Consensus 289 l~~~ 292 (342)
|+.+
T Consensus 334 L~~K 337 (903)
T 3qex_A 334 IDAK 337 (903)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9987
No 408
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA-BI DNA-directed DNA polymerase, exonuclease, hydrolase; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.014 Score=60.73 Aligned_cols=101 Identities=15% Similarity=0.170 Sum_probs=65.1
Q ss_pred hhhcCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc-----ccCCC-----------------
Q 019380 182 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNYPD----------------- 238 (342)
Q Consensus 182 e~l~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~~~----------------- 238 (342)
..+...+...+++.+|.++|... .-.+|+|||+ .||+.+|. +..+.
T Consensus 305 ~~V~~~~sE~eLL~~F~~~i~~~-----------DPDIIvGyNi~~FDlpyL~~Ra~~lgi~~~~~lGR~~~~~~~~~~~ 373 (919)
T 3iay_A 305 SMIFSHATEEEMLSNWRNFIIKV-----------DPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKES 373 (919)
T ss_dssp BEEEEESSHHHHHHHHHHHHHHH-----------CCSEEEESSTTTTHHHHHHHHHHHTTCTTCSCCSSBTTCCCCBCCE
T ss_pred CeEEECCCHHHHHHHHHHHHHHh-----------CCCEEEecCCccCCHHHHHHHHHHcCCCchhhhccccCcccccccc
Confidence 34556678899999999999443 2259999998 58999985 11110
Q ss_pred -------------------cceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCCC-------------------cH
Q 019380 239 -------------------HMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHD-------------------PY 280 (342)
Q Consensus 239 -------------------~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~-------------------A~ 280 (342)
..++|+..+.+.. ....+|+|+.+|..+||.....-.++ .+
T Consensus 374 ~~~~~~~g~~~~~~~~i~GR~~lDl~~~~k~~-~~l~sysL~~Va~~~Lg~~K~dv~~~~I~~l~~~~~~~~~~L~~Y~~ 452 (919)
T 3iay_A 374 VFSSKAYGTRETKNVNIDGRLQLDLLQFIQRE-YKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRRRLAVYCL 452 (919)
T ss_dssp EEEETTTEEEEECCBCCTTCEEEEHHHHHHHH-CCCSCCCHHHHHHHHHCCC------CCHHHHHTSCHHHHHHHHHHHH
T ss_pred ccccccccccccceeEEcCeEEEEhHHHHHhh-cCCCCCCHHHHHHHhcccCCCCCCHHHHHHHHhcChhhHHHHHHHHH
Confidence 0133443333322 24568999999999999763211221 14
Q ss_pred HHHHHHHHHHHHHH
Q 019380 281 EDCVSVMRLYKRFR 294 (342)
Q Consensus 281 ~Da~~t~~l~~~~~ 294 (342)
.||..+++|+.++.
T Consensus 453 ~Da~l~~~L~~kl~ 466 (919)
T 3iay_A 453 KDAYLPLRLMEKLM 466 (919)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh
Confidence 68999999988863
No 409
>3k59_A POL II, DNA polymerase II; protein-DNA complex, DNA damage, DNA repair, DNA-binding; HET: DNA DOC DCP; 1.92A {Escherichia coli} PDB: 3k57_A* 3k58_A* 3k5l_A* 3k5m_A* 3k5n_A* 3k5o_A* 3maq_A* 1q8i_A*
Probab=95.94 E-value=0.028 Score=57.38 Aligned_cols=145 Identities=16% Similarity=0.232 Sum_probs=84.4
Q ss_pred CCCCcceecccccccccCCCcccccceEEeecCCCCeEEeeecCCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHH
Q 019380 121 CRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEI 200 (342)
Q Consensus 121 ~~~~~~v~~D~Ettg~~~~~~~~il~~v~vv~~~~~~~~~~lv~p~~~i~~~~~~i~GIt~e~l~~~~~~~~v~~~~~~~ 200 (342)
.+..++++||+|+.+. +.+ ..+...+.....++ .+-.+..+. .+..-.+.-.+...+++.+|.++
T Consensus 150 ~p~lrilsfDIE~~~~--g~i----~~I~~~~~~~~~v~-~l~~~~~~~--------~~~~~~V~~f~~E~~lL~~f~~~ 214 (786)
T 3k59_A 150 RPPLKWVSIDIETTRH--GEL----YCIGLEGCGQRIVY-MLGPENGDA--------SSLDFELEYVASRPQLLEKLNAW 214 (786)
T ss_dssp CCCCCEEEEEEEECTT--SCE----EEEEEEETTEEEEE-EESSCCSCC--------TTCSSEEEEESSHHHHHHHHHHH
T ss_pred CCCCeEEEEEEEEcCC--CCE----EEEEecCCCCCeEE-EEecCCCCC--------CCCCceEEEeCCHHHHHHHHHHH
Confidence 5778899999999843 222 33344322222222 111121110 01112344456788999999999
Q ss_pred HhcCCCccccccCCCCCeEEEeeCch-hhhhhcc-----ccCC----C-----------------------cceeecccc
Q 019380 201 LNNGESTGRLMLDDGKARLLVGHGLE-HDLDSLR-----MNYP----D-----------------------HMLRDTAKY 247 (342)
Q Consensus 201 l~~~~~~~~~~~~~~~~~~lvgh~~~-~D~~~l~-----~~~~----~-----------------------~~~~Dt~~l 247 (342)
+.+. .-.+|||||+. ||+.+|. ...+ + ..++|...+
T Consensus 215 i~~~-----------dPDii~g~N~~~FD~pyL~~Ra~~~~i~~~lGR~~~~~~~~~~~~~~~~~~~~i~GRv~lDl~~~ 283 (786)
T 3k59_A 215 FANY-----------DPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEA 283 (786)
T ss_dssp HHHH-----------CCSEEEESSTTTTHHHHHHHHHHHHTCCCCCBTTTBCCEEEECSSSTTCEEEECTTCEEEEHHHH
T ss_pred HHHc-----------CCCEEEecCCccCcHHHHHHHHHHhCCCceeccCCCcccccccccCCCceeEEEcCEEEEEhHHH
Confidence 9543 22499999965 7999886 1111 0 113344333
Q ss_pred ccccccCCCCccHHHHHHHHhCCcCCCCCCCc----------------------HHHHHHHHHHHHHH
Q 019380 248 RPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDP----------------------YEDCVSVMRLYKRF 293 (342)
Q Consensus 248 ~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A----------------------~~Da~~t~~l~~~~ 293 (342)
.+.......+|+|+.+|..+||.. .. .|+. +.||..+++|+.++
T Consensus 284 lk~~~~~l~SysL~~Va~~~Lg~~-K~-~~~~~~~~~eI~~~~~~~~~~L~~Y~l~Da~L~~~L~~kl 349 (786)
T 3k59_A 284 LKSAFWNFSSFSLETVAQELLGEG-KS-IDNPWDRMDEIDRRFAEDKPALATYNLKNCELVTQIFHKT 349 (786)
T ss_dssp HHHTTCCCSCCSHHHHHHHHHCCC-CC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCHHHHHHHHhCCC-Cc-ccCccccHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 332122457899999999998876 22 2332 57999999999885
No 410
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=95.82 E-value=0.0025 Score=49.33 Aligned_cols=28 Identities=25% Similarity=0.542 Sum_probs=24.0
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhh
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
.+|++||.|..|++.|.+.+.|..|+++
T Consensus 45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 45 LPGGGLHRCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence 3588899999999999999999988876
No 411
>3cym_A Uncharacterized protein BAD_0989; structural genomics, unknown function; 2.10A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=95.46 E-value=0.02 Score=54.55 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=65.2
Q ss_pred HHHHHHHHhcCCCccccccCCCCCeEEEeeCchhhhhhcc-ccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcC
Q 019380 194 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDI 272 (342)
Q Consensus 194 ~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~ 272 (342)
+..|.+++ .+...|+|++..|+.+|. .......++||+..+..+.+ . +++|..|++.|+|...
T Consensus 84 l~~L~~lL--------------~d~~KV~h~~k~Dl~~L~~~gi~~~~~fDt~lAa~lL~~-~-~~gL~~L~~~~lg~~~ 147 (440)
T 3cym_A 84 WNDFNRAV--------------GDAVWILHDSLQDLPGFDELGMEPQRLFDTEIAARLLGL-K-RFGLAAVTEHFLGLTL 147 (440)
T ss_dssp HHHHHHHH--------------TTCEEEESSHHHHHHHHHHHTCCCCEEEEHHHHHHHTTC-S-SCSHHHHHHHHHCEEC
T ss_pred HHHHHHHH--------------CCCCEEEEcCHHHHHHHHHcCCcCCceehHHHHHHHhCC-C-CCCHHHHHHHHhCCCc
Confidence 35677888 444789999999999986 11112368999765555554 3 8999999999988765
Q ss_pred CCCCC---------C------cHHHHHHHHHHHHHHHhhhhh
Q 019380 273 QSGVH---------D------PYEDCVSVMRLYKRFRRQDHQ 299 (342)
Q Consensus 273 ~~~~H---------~------A~~Da~~t~~l~~~~~~~~~~ 299 (342)
..+.- + |..||..+..||..+..+...
T Consensus 148 ~K~~~~sdw~~rpLs~~q~~YAa~Da~~Ll~L~~~L~~~L~~ 189 (440)
T 3cym_A 148 AKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKR 189 (440)
T ss_dssp CCCCTTCCTTCSSCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccccccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54311 2 678999999999998776543
No 412
>2gv9_A DNA polymerase; polymerase alpha fold, transferase; HET: DNA; 2.68A {Human herpesvirus 1} PDB: 1dml_B*
Probab=94.85 E-value=0.082 Score=56.35 Aligned_cols=100 Identities=13% Similarity=0.044 Sum_probs=64.9
Q ss_pred hcCCCChHHHHHHHHHHHhcCCCccccccCCCCCeEEEeeCc-hhhhhhcc--------ccCCC----------------
Q 019380 184 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR--------MNYPD---------------- 238 (342)
Q Consensus 184 l~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~--------~~~~~---------------- 238 (342)
+.......+++..|.++|... .-.||||||+ .||+.+|. +..+.
T Consensus 395 V~~~~sE~eLL~~F~~~I~~~-----------DPDIIvGyNi~~FDlpyL~~Ra~~~~gl~l~~~GRl~r~~~~k~~~~~ 463 (1193)
T 2gv9_A 395 VLEFDSEFEMLLAFMTLVKQY-----------GPEFVTGYNIINFDWPFLLAKLTDIYKVPLDGYGRMNGRGVFRVWDIG 463 (1193)
T ss_dssp EEEESSHHHHHHHHHHHHHHH-----------CCSEEEESSTTTTHHHHHHHHHHHTTCCCCTTTSSBSSSCCEEECC--
T ss_pred EEecCCHHHHHHHHHHHHHhc-----------CCCEEEEcCCcCccHHHHHHHHHHHcCCChHHhcccccCCcceeeccc
Confidence 444567889999999999543 2249999997 57998876 11110
Q ss_pred --------------cceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCCC-------------------cHHHHHH
Q 019380 239 --------------HMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHD-------------------PYEDCVS 285 (342)
Q Consensus 239 --------------~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~-------------------A~~Da~~ 285 (342)
..++|+..+.+... ...+|+|+.+|..+||.....-.+. .+.||..
T Consensus 464 ~~~f~~~~~~~i~GRv~lDl~~~~~~~~-kl~sYsL~~Va~~~Lg~~K~dv~~~eI~~~~~~~~~~r~~L~~Ycl~Da~l 542 (1193)
T 2gv9_A 464 QSHFQKRSKIKVNGMVNIDMYGIITDKI-KLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYATGPAQRGVIGEYCIQDSLL 542 (1193)
T ss_dssp --------CEEETTBEEEEHHHHHTTTC-CCSCCCHHHHHHHTSCCCCCCCCTTTHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred cccccccceEEEcCeEeehHHHHHHHHh-ccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHcCChhHHHHHHHHHHHHHH
Confidence 12345444333322 4568999999999988763221111 2458999
Q ss_pred HHHHHHHHHh
Q 019380 286 VMRLYKRFRR 295 (342)
Q Consensus 286 t~~l~~~~~~ 295 (342)
+++||.+++.
T Consensus 543 t~~L~~kl~~ 552 (1193)
T 2gv9_A 543 VGQLFFKFLP 552 (1193)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHHHH
Confidence 9999888743
No 413
>2d5r_A CCR4-NOT transcription complex subunit 7; poly(A) deadenylase, antiproliferative protein, transcription; 2.50A {Homo sapiens} SCOP: c.55.3.9
Probab=94.69 E-value=0.075 Score=46.47 Aligned_cols=77 Identities=13% Similarity=0.114 Sum_probs=61.5
Q ss_pred CCeEEEeeCchhhhhhcc-----cc---------------CCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCC
Q 019380 216 KARLLVGHGLEHDLDSLR-----MN---------------YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSG 275 (342)
Q Consensus 216 ~~~~lvgh~~~~D~~~l~-----~~---------------~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~ 275 (342)
++..+|.++..+|+.+|- .. +| .+.|+..+++.... ..-+|+.||+.+ |+.--+.
T Consensus 139 ~~v~Witfhg~yDf~yL~k~L~~~~LP~~~~~F~~~l~~~FP--~iyD~K~l~~~~~~--l~~gL~~la~~L-~v~r~g~ 213 (252)
T 2d5r_A 139 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP--VIYDVKYLMKSCKN--LKGGLQEVAEQL-ELERIGP 213 (252)
T ss_dssp SSCEEEESSCHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHCS--CEEEHHHHGGGCTT--CCSSHHHHHHHH-TCCCCSS
T ss_pred CCceEEEecCcchHHHHHHHhcCCCCCCCHHHHHHHHHHHCc--chhhHHHHHHHhcc--cCCCHHHHHHHc-CCCccCc
Confidence 457899999999999865 11 34 37898888877642 356899999998 8885444
Q ss_pred CCCcHHHHHHHHHHHHHHHhhh
Q 019380 276 VHDPYEDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 276 ~H~A~~Da~~t~~l~~~~~~~~ 297 (342)
.|.|-.|+..|+.+|.++++..
T Consensus 214 ~HqAGsDsllT~~~F~km~~~~ 235 (252)
T 2d5r_A 214 QHQAGSDSLLTGMAFFKMREMF 235 (252)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHT
T ss_pred ccchhhhHHHHHHHHHHHHHHh
Confidence 8999999999999999998775
No 414
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.41 E-value=0.023 Score=35.54 Aligned_cols=24 Identities=33% Similarity=0.591 Sum_probs=22.7
Q ss_pred CcccccccccccCCHHHHHHHHhh
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
.+|.|+.|+..|.....|..||+-
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmky 34 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCY 34 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhhh
Confidence 689999999999999999999985
No 415
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.93 E-value=0.035 Score=34.72 Aligned_cols=27 Identities=22% Similarity=0.310 Sum_probs=22.7
Q ss_pred cccccccccCChhhHHHHHhhcCCCCC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
.|+.|++.|+....|++||+-..++.+
T Consensus 14 ~CPrCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 14 ICPRCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp CCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred eCCcccccccchHHHHhhhhhcCcchh
Confidence 489999999999999999996665544
No 416
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=93.57 E-value=0.062 Score=36.38 Aligned_cols=57 Identities=23% Similarity=0.238 Sum_probs=38.1
Q ss_pred cccccccCCHHHHHHHH-hhhccCCCCCccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCChhhHHH
Q 019380 18 VACYKQFKRKDHLIEHM-KISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIK 96 (342)
Q Consensus 18 ~~C~k~f~~~~~L~~H~-~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~ 96 (342)
..|++.|.+...|..|+ +. |.+.++. . ...+|.|.. ..|++.+.....|.+
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~--Hv~~~~~---------~-------~~~~~~C~W----------~~C~~~~~~~~~L~~ 58 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKD--HVSQDFK---------H-------PMEPLACNW----------EDCDFLGDDTASIVN 58 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHH--SCCCCCC---------C-------SSCCEECCC----------SSCCCEESSHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHhh--ccCcccC---------C-------CCCCCEeeC----------CCCcCCCCChHHHHh
Confidence 56999999999999998 46 7766431 0 012455521 356666666678999
Q ss_pred HHhhcC
Q 019380 97 HKEACS 102 (342)
Q Consensus 97 H~~~h~ 102 (342)
|++..|
T Consensus 59 Hir~~H 64 (64)
T 1zw8_A 59 HINAQH 64 (64)
T ss_dssp HHHHHC
T ss_pred hccccC
Confidence 988654
No 417
>1uoc_A POP2; hydrolase, DEDD nuclease, mRNA degradation, poly(A) tail, transcription regulation, repressor, phosphorylation.; 2.3A {Saccharomyces cerevisiae} SCOP: c.55.3.9
Probab=93.09 E-value=0.09 Score=46.84 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=59.6
Q ss_pred CCeEEEeeCchhhhhhcc-----cc---------------CCCcceeeccccccccccC-------------CCCccHHH
Q 019380 216 KARLLVGHGLEHDLDSLR-----MN---------------YPDHMLRDTAKYRPLMKTN-------------LVSHSLKY 262 (342)
Q Consensus 216 ~~~~lvgh~~~~D~~~l~-----~~---------------~~~~~~~Dt~~l~~~~~~~-------------~~~~~L~~ 262 (342)
++..+|.++..+|+.+|- .. +| .+.|+..+.+..... ..+.+|+.
T Consensus 154 ~~v~Witfhg~yDfgyL~k~Lt~~~LP~~~~~F~~~l~~~FP--~iyD~K~l~~~~~~l~~~~~~~~~~~~~~~~~~L~~ 231 (289)
T 1uoc_A 154 DSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMP--NFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTT 231 (289)
T ss_dssp TTSEEEESSTTHHHHHHHHHHTTSCCCSSHHHHHHHHHHHCS--SEEEHHHHHHHHTTTCC-------------CCSHHH
T ss_pred CCceEEEccCcchHHHHHHHhccccCCcCHHHHHHHHHHhCc--cceeHHHHHHHHHhccCcccccccccccccCCCHHH
Confidence 456889988999999765 11 34 377887766544221 13568999
Q ss_pred HHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhh
Q 019380 263 LTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 297 (342)
Q Consensus 263 l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~ 297 (342)
||+.+ |++..+..|.|=.|+..|+.+|.++++..
T Consensus 232 lA~~L-~v~r~g~~HqAGsDSllT~~~F~kl~~~~ 265 (289)
T 1uoc_A 232 LADEL-GLPRFSIFTTTGGQSLLMLLSFCQLSKLS 265 (289)
T ss_dssp HHHHT-TCCCCGGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHc-CCCccCcccccHHHHHHHHHHHHHHHHHH
Confidence 99998 98855558999999999999999999775
No 418
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=92.50 E-value=0.077 Score=41.32 Aligned_cols=74 Identities=19% Similarity=0.276 Sum_probs=44.4
Q ss_pred CCcccccccccccCCHHHHHHHH--hhhccCCC-CC-ccccCc-------cccCChhhhhhhcCCCcccCCCCCcccCCc
Q 019380 12 TARHKCVACYKQFKRKDHLIEHM--KISYHSVH-QP-KCAVCQ-------KLSKSFESLREHLTGPLSKAHCSGIFSDRG 80 (342)
Q Consensus 12 ~~~~~C~~C~k~f~~~~~L~~H~--~~~~H~~~-~~-~C~~C~-------~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~ 80 (342)
-+++.|..|+..|.+...+..|. +. |... +. .+. ++ +.+... .+... ...-....
T Consensus 30 ~~~~~C~~C~v~~~S~s~~~~H~~gkk--H~~~v~~~~~~-~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~ 95 (127)
T 1zu1_A 30 FSDTQCKVCSAVLISESQKLAHYQSRK--HANKVRRYMAI-NQGEDSVPAKKFKAA----PAEIS-------DGEDRSKC 95 (127)
T ss_dssp BCSSEETTTTEECCSHHHHHHHHHCHH--HHHHHHHHHHH-TTCCCCCSCCCCSCC----SSCCS-------SCCCTTTE
T ss_pred CCCCcCcCCCCEeCCHHHHHHHHCcHH--HHHHHHHHhcc-cCcccCCCCCccCCC----ccccc-------cCCCCCeE
Confidence 46799999999999999999998 45 5422 11 111 11 111100 00000 00001114
Q ss_pred ccccccccCChhhHHHHHh
Q 019380 81 CNLCMNIFDSPSSLIKHKE 99 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~ 99 (342)
|..|++.|.....+..|..
T Consensus 96 C~~C~~~f~s~~~~~~H~~ 114 (127)
T 1zu1_A 96 CPVCNMTFSSPVVAESHYI 114 (127)
T ss_dssp ETTTTEECSSHHHHHHHHT
T ss_pred cCCCCCEeCCHHHHHHHHC
Confidence 8999999999999999985
No 419
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=90.46 E-value=0.19 Score=33.87 Aligned_cols=34 Identities=15% Similarity=0.136 Sum_probs=27.2
Q ss_pred cccccccCChhhHHHHH-hhcCCCC------CCCCc--ccccc
Q 019380 82 NLCMNIFDSPSSLIKHK-EACSLSA------PVPFK--ISGAI 115 (342)
Q Consensus 82 ~~C~k~F~~~~~L~~H~-~~h~~~~------~~~~~--~c~~~ 115 (342)
..|++.|.....|..|+ +.|.+.+ ++.|. .|+..
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~ 49 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFL 49 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCE
T ss_pred CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCC
Confidence 35889999999999998 5787766 99985 66544
No 420
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=89.63 E-value=0.24 Score=28.84 Aligned_cols=26 Identities=27% Similarity=0.583 Sum_probs=22.6
Q ss_pred ccccccccccCCHHHHHHHHhhhccCC
Q 019380 15 HKCVACYKQFKRKDHLIEHMKISYHSV 41 (342)
Q Consensus 15 ~~C~~C~k~f~~~~~L~~H~~~~~H~~ 41 (342)
|.||.|-+.|.+...|..|-... |+.
T Consensus 6 FiCP~C~~~l~s~~~L~~Hye~~-H~~ 31 (34)
T 3mjh_B 6 FICPQCMKSLGSADELFKHYEAV-HDA 31 (34)
T ss_dssp EECTTTCCEESSHHHHHHHHHHH-TSS
T ss_pred cCCcHHHHHcCCHHHHHHHHHhc-ccc
Confidence 99999999999999999998653 654
No 421
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=88.50 E-value=0.12 Score=39.96 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=16.4
Q ss_pred cccccccccCChhhHHHHHhh
Q 019380 80 GCNLCMNIFDSPSSLIKHKEA 100 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~ 100 (342)
.|..|++.|.+.++|..|+++
T Consensus 52 yC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 52 RCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp EETTTTEECSSHHHHHHHTTC
T ss_pred EcccCcchhCCHHHHHHHHhh
Confidence 357788888888888888765
No 422
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=85.74 E-value=0.74 Score=26.93 Aligned_cols=28 Identities=14% Similarity=0.382 Sum_probs=23.6
Q ss_pred CCCCCcccccccccccCCHHHHHHHHhh
Q 019380 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 9 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
+.+..++.|..|+-+|..-..+..|++-
T Consensus 3 ~~~~~~~~C~~C~IsF~~l~ty~aHKk~ 30 (36)
T 1fu9_A 3 AAEVMKKYCSTCDISFNYVKTYLAHKQF 30 (36)
T ss_dssp CCCCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred CCccCcCeeccccceehhhHHHhhhhee
Confidence 3456689999999999999999999875
No 423
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=82.74 E-value=0.45 Score=34.08 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=22.6
Q ss_pred ccccccccCChhhHHHHHhhcCCCCCCCC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~~~~ 109 (342)
|-+||+.|. .|.+|...|||..|...
T Consensus 24 ClecGK~fK---~LkRHL~~~hgltpeeY 49 (87)
T 2jsp_A 24 CLECGGSFK---SLKRHLTTHHSMTPEEY 49 (87)
T ss_dssp CTBTCCEES---BHHHHHHHTTCSCHHHH
T ss_pred ecccchhhH---HHHHHHHHccCCCHHHH
Confidence 899999998 58899999999888664
No 424
>2py5_A DNA polymerase; protein-DNA complex, replication, transferase/DNA complex; HET: DNA; 1.60A {Bacillus phage PHI29} SCOP: c.55.3.5 e.8.1.1 PDB: 1xhz_A* 1xhx_A* 2ex3_A* 1xi1_A* 2pyj_A* 2pyl_A* 2pzs_A*
Probab=79.90 E-value=1.6 Score=42.87 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=26.0
Q ss_pred CccHHHHHHHHhCCcCCCC--CCC----------------cHHHHHHHHHHHHHHH
Q 019380 257 SHSLKYLTRTYLGYDIQSG--VHD----------------PYEDCVSVMRLYKRFR 294 (342)
Q Consensus 257 ~~~L~~l~~~~~~~~~~~~--~H~----------------A~~Da~~t~~l~~~~~ 294 (342)
..||+.+++.| +++.+.+ .|+ .+.|++.+++++...+
T Consensus 127 ~~SL~~~a~~f-~~~~~K~~~py~~~~~~~~~~~~~~~~Y~~~Dv~ll~~i~~~~f 181 (575)
T 2py5_A 127 PFPVKKIAKDF-KLTVLKGDIDYHKERPVGYKITPEEYAYIKNDIQIIAEALLIQF 181 (575)
T ss_dssp CSCHHHHHHHT-TCCCCSSCCCTTSCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHh-CCcccCCccCccccCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999988 6553222 121 3569999999998764
No 425
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=77.66 E-value=0.49 Score=49.09 Aligned_cols=83 Identities=18% Similarity=0.241 Sum_probs=55.3
Q ss_pred CCeEEEeeCchhhhhhccccC----CCcceeecccccccccc--------------------------------------
Q 019380 216 KARLLVGHGLEHDLDSLRMNY----PDHMLRDTAKYRPLMKT-------------------------------------- 253 (342)
Q Consensus 216 ~~~~lvgh~~~~D~~~l~~~~----~~~~~~Dt~~l~~~~~~-------------------------------------- 253 (342)
..+||||||+.||..-+.-++ ....++||+.|--...+
T Consensus 193 ~~rlIVGHNVsyDRARI~EeY~l~~sk~rFlDTMSLHvavsG~~s~QR~~w~~~kk~k~~~~~e~~~~~~~~~~~~~~p~ 272 (1172)
T 3ikm_A 193 QEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMAISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPA 272 (1172)
T ss_dssp SCCCCBCBCSSSSTTGGGTSSCSSCCCCCCCBTTHHHHHHSCCCHHHHHHHHHHHHC-----------------------
T ss_pred CccEEEeCCcchhHHHHHHHHhcccCCceeeechhhhhhccccchhhHHHHHHhhhhcccchhhHHHHhhhccccccCcc
Confidence 468999999999999998333 34789999864310000
Q ss_pred --------CCCCc--cHHHHHHHHhCC-cCCCCCCCc--------------------HHHHHHHHHHHHHHHhhhh
Q 019380 254 --------NLVSH--SLKYLTRTYLGY-DIQSGVHDP--------------------YEDCVSVMRLYKRFRRQDH 298 (342)
Q Consensus 254 --------~~~~~--~L~~l~~~~~~~-~~~~~~H~A--------------------~~Da~~t~~l~~~~~~~~~ 298 (342)
....- ||.++++.|.|+ +++....+. ..|+.+|.+||.+++-.+.
T Consensus 273 ~~~~~W~~~sS~N~~SL~dV~~lhcg~~~ldK~~Rd~Fv~~~~~dI~~~fq~Lm~YCA~DV~aTh~V~~kl~P~F~ 348 (1172)
T 3ikm_A 273 ISSWDWLDISSVNSNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFL 348 (1172)
T ss_dssp ---CCCCCCCCTTSHHHHHHHTCSSCSCS--SCSSSSTTTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcccccCCCcCCHHHHHHHhCCCcccChhhHhhhhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 00113 789999989887 665553222 2399999999999876543
No 426
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=77.00 E-value=1.1 Score=36.36 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=22.6
Q ss_pred ccccccccCChhhHHHHHhhcCCCCCCCCccccccc
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAID 116 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~ 116 (342)
|+.|+..+ .+..|..|.+.....++..|+.|+...
T Consensus 113 C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~ 147 (170)
T 3hcs_A 113 CPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM 147 (170)
T ss_dssp CTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE
T ss_pred CCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc
Confidence 66777666 355577777666666666677666543
No 427
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=76.10 E-value=1.3 Score=27.56 Aligned_cols=13 Identities=23% Similarity=0.467 Sum_probs=5.7
Q ss_pred cccCCCCCcccCC
Q 019380 67 LSKAHCSGIFSDR 79 (342)
Q Consensus 67 ~~C~~C~k~f~~~ 79 (342)
|.|-.|++.|+..
T Consensus 4 Y~C~rCg~~fs~~ 16 (48)
T 4ayb_P 4 YRCGKCWKTFTDE 16 (48)
T ss_dssp -CCCCTTTTCCCC
T ss_pred EEeeccCCCccHH
Confidence 3444455555443
No 428
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=74.00 E-value=4.5 Score=32.55 Aligned_cols=25 Identities=20% Similarity=0.466 Sum_probs=11.9
Q ss_pred ccccccccCChhhHHHHHhhcCCCCC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~ 106 (342)
|+.|+..+.. ..|..|...+.|+-+
T Consensus 140 C~~C~~~~~~-~~l~~H~~~~~~~~~ 164 (170)
T 3hcs_A 140 CDNCAASMAF-EDKEIHDQNCPLALE 164 (170)
T ss_dssp CTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred CCCCCCccCH-HHHHhHHHhCcChhh
Confidence 5556555543 335566655555544
No 429
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=72.72 E-value=2.6 Score=24.64 Aligned_cols=24 Identities=21% Similarity=0.438 Sum_probs=17.8
Q ss_pred ccccccccCChhhHHHHHhhcCCC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLS 104 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~ 104 (342)
|..|+-+|..-.++..|++-....
T Consensus 11 C~~C~IsF~~l~ty~aHKk~YC~s 34 (36)
T 1fu9_A 11 CSTCDISFNYVKTYLAHKQFYCKN 34 (36)
T ss_dssp ETTTTEECSSHHHHHHHHHHTSCC
T ss_pred eccccceehhhHHHhhhheecCCC
Confidence 777888888888888887765543
No 430
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=71.57 E-value=2.2 Score=24.71 Aligned_cols=23 Identities=39% Similarity=0.616 Sum_probs=19.8
Q ss_pred cccccccccCChhhHHHHHhhcC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
.||.|.+.|.....|..|-...|
T Consensus 7 iCP~C~~~l~s~~~L~~Hye~~H 29 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYEAVH 29 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHT
T ss_pred CCcHHHHHcCCHHHHHHHHHhcc
Confidence 38999999999999999987655
No 431
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.77 E-value=2.1 Score=29.81 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=17.1
Q ss_pred ccccccccC-------ChhhHHHHHhhcCCC
Q 019380 81 CNLCMNIFD-------SPSSLIKHKEACSLS 104 (342)
Q Consensus 81 C~~C~k~F~-------~~~~L~~H~~~h~~~ 104 (342)
|..|++.+. ..++|.+|++.+|.+
T Consensus 31 Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~ 61 (76)
T 2djr_A 31 CRLCGRQVSRGPGVNVGTTALWKHLKSMHRE 61 (76)
T ss_dssp ESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred CCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence 566665555 467999999887743
No 432
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=67.88 E-value=2.9 Score=30.94 Aligned_cols=9 Identities=22% Similarity=0.626 Sum_probs=8.2
Q ss_pred ccccCcccc
Q 019380 45 KCAVCQKLS 53 (342)
Q Consensus 45 ~C~~C~~~f 53 (342)
+|..||..|
T Consensus 69 ~C~~CG~~F 77 (105)
T 2gmg_A 69 QCRKCGFVF 77 (105)
T ss_dssp BBTTTCCBC
T ss_pred ChhhCcCee
Confidence 899999998
No 433
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=63.52 E-value=3.8 Score=30.33 Aligned_cols=24 Identities=21% Similarity=0.472 Sum_probs=13.2
Q ss_pred CCCcccCCCCCccc-----CCcccccccc
Q 019380 64 TGPLSKAHCSGIFS-----DRGCNLCMNI 87 (342)
Q Consensus 64 ~~~~~C~~C~k~f~-----~~~C~~C~k~ 87 (342)
..++.|..||..|. ...|+.|+..
T Consensus 65 v~p~~C~~CG~~F~~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 65 IKPAQCRKCGFVFKAEINIPSRCPKCKSE 93 (105)
T ss_dssp ECCCBBTTTCCBCCCCSSCCSSCSSSCCC
T ss_pred EECcChhhCcCeecccCCCCCCCcCCCCC
Confidence 34667766666662 1236666543
No 434
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=63.13 E-value=1.7 Score=30.37 Aligned_cols=11 Identities=36% Similarity=0.733 Sum_probs=5.9
Q ss_pred ccccCccccCC
Q 019380 45 KCAVCQKLSKS 55 (342)
Q Consensus 45 ~C~~C~~~f~~ 55 (342)
+|+.||.....
T Consensus 10 ~~PlCG~~L~W 20 (95)
T 2k5c_A 10 KCPICGSPLKW 20 (95)
T ss_dssp ECSSSCCEECH
T ss_pred cCCcCCCccCH
Confidence 56666555443
No 435
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=62.17 E-value=4.3 Score=31.18 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=22.9
Q ss_pred CCCCcccccccccccCCHHHHHHHHhh
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
.+.+.|.|..|++.|.+...+..|...
T Consensus 89 ~~~~~~~C~~C~~~f~s~~~~~~H~~g 115 (127)
T 1zu1_A 89 GEDRSKCCPVCNMTFSSPVVAESHYIG 115 (127)
T ss_dssp CCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred CCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence 456778999999999999999999854
No 436
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=62.09 E-value=1.7 Score=30.84 Aligned_cols=9 Identities=33% Similarity=0.903 Sum_probs=4.7
Q ss_pred ccccccccC
Q 019380 81 CNLCMNIFD 89 (342)
Q Consensus 81 C~~C~k~F~ 89 (342)
|+.|++.|.
T Consensus 48 C~~Cg~~~a 56 (83)
T 1vq8_Z 48 CSYCDYKFT 56 (83)
T ss_dssp ETTTCCEEE
T ss_pred CCCCCCEec
Confidence 555555543
No 437
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=60.54 E-value=5.2 Score=27.31 Aligned_cols=12 Identities=17% Similarity=0.647 Sum_probs=5.8
Q ss_pred cccccccccccC
Q 019380 14 RHKCVACYKQFK 25 (342)
Q Consensus 14 ~~~C~~C~k~f~ 25 (342)
.|.|..||..|.
T Consensus 28 ~Y~C~~CG~~~e 39 (70)
T 1twf_L 28 KYICAECSSKLS 39 (70)
T ss_dssp CEECSSSCCEEC
T ss_pred EEECCCCCCcce
Confidence 345555554443
No 438
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=59.98 E-value=2.9 Score=26.78 Aligned_cols=21 Identities=14% Similarity=0.463 Sum_probs=15.2
Q ss_pred ccccccccccCCHHHHHHHHh
Q 019380 15 HKCVACYKQFKRKDHLIEHMK 35 (342)
Q Consensus 15 ~~C~~C~k~f~~~~~L~~H~~ 35 (342)
-.|..|+..|+.+..++.|.-
T Consensus 14 ~eC~lC~vkYs~r~slqDHIF 34 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHIF 34 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHHT
T ss_pred ccccccCcccccccchhhhhc
Confidence 577777777777777777763
No 439
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=55.70 E-value=9.4 Score=25.43 Aligned_cols=15 Identities=20% Similarity=0.293 Sum_probs=9.6
Q ss_pred CCCcccccccccccC
Q 019380 11 STARHKCVACYKQFK 25 (342)
Q Consensus 11 ~~~~~~C~~C~k~f~ 25 (342)
.+-.|.|..|+..+.
T Consensus 18 ~~v~Y~C~~Cg~~~~ 32 (63)
T 3h0g_L 18 ATMIYLCADCGARNT 32 (63)
T ss_dssp -CCCCBCSSSCCBCC
T ss_pred CCeEEECCCCCCeee
Confidence 345677777777665
No 440
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=55.21 E-value=2.7 Score=31.69 Aligned_cols=27 Identities=15% Similarity=0.348 Sum_probs=17.5
Q ss_pred CCCcccCCCCC-cccC-----CcccccccccCC
Q 019380 64 TGPLSKAHCSG-IFSD-----RGCNLCMNIFDS 90 (342)
Q Consensus 64 ~~~~~C~~C~k-~f~~-----~~C~~C~k~F~~ 90 (342)
...|.|+.|++ .+.. +.|..|++.|.-
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAG 90 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTG 90 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEEC
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEEC
Confidence 35677888887 3322 238888888764
No 441
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=54.81 E-value=3.9 Score=28.53 Aligned_cols=46 Identities=20% Similarity=0.305 Sum_probs=29.1
Q ss_pred cccccccccccCCHHHHHHHHhhhccCCC-CCccccCccccCChhhhhhhc
Q 019380 14 RHKCVACYKQFKRKDHLIEHMKISYHSVH-QPKCAVCQKLSKSFESLREHL 63 (342)
Q Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~~~H~~~-~~~C~~C~~~f~~~~~l~~H~ 63 (342)
-|.|..||.++.- ..+..|... =.+. ...|-.|++.|.. ..++.|.
T Consensus 10 ~F~C~~Cgd~lKK-~kv~~H~~~--Cr~~~~~SCIDC~~~F~~-~~y~~Ht 56 (79)
T 1wjv_A 10 FFTCNACGESVKK-IQVEKHVSN--CRNCECLSCIDCGKDFWG-DDYKSHV 56 (79)
T ss_dssp EEEESSSCCEEET-THHHHHHHH--CTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred EEEcCCCCCeeec-ccchhHHhh--CCCCCcEEecccCCeeCC-CCEeCEe
Confidence 4888888887654 557777654 2222 2377777777774 3456664
No 442
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=54.42 E-value=6.8 Score=22.10 Aligned_cols=22 Identities=27% Similarity=0.658 Sum_probs=19.5
Q ss_pred ccccccccCChhhHHHHHhhcC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
|..|.+.|+...+|..|.+..|
T Consensus 12 crfckkkysdvknlikhire~h 33 (37)
T 2elu_A 12 CRFCKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp ETTTTEECSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8889999999999999998655
No 443
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=52.58 E-value=8.4 Score=26.39 Aligned_cols=8 Identities=38% Similarity=1.032 Sum_probs=4.2
Q ss_pred ccccCccc
Q 019380 45 KCAVCQKL 52 (342)
Q Consensus 45 ~C~~C~~~ 52 (342)
.|+.|++.
T Consensus 28 ~C~fCgk~ 35 (72)
T 3jyw_9 28 DCSFCGKK 35 (72)
T ss_dssp CCSSCCSS
T ss_pred cCCCCCCc
Confidence 55555533
No 444
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=51.89 E-value=5.4 Score=32.01 Aligned_cols=25 Identities=20% Similarity=0.220 Sum_probs=17.4
Q ss_pred CCCcccCCCCCcccC----Cccccccccc
Q 019380 64 TGPLSKAHCSGIFSD----RGCNLCMNIF 88 (342)
Q Consensus 64 ~~~~~C~~C~k~f~~----~~C~~C~k~F 88 (342)
+..|.|..|++.|.. ..||.||...
T Consensus 130 ~~~y~C~~Cg~~~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp CCCEEESSSCCEESSCCGGGBCTTTCCBE
T ss_pred cEEEECCCCCCcccCCCCCCcCCCCCCcc
Confidence 346788888888873 2488888653
No 445
>1bgx_T TAQ DNA polymerase; DNA polymerase, FAB, PCR, inhibition, helix-coil dynamics, inhibitor design, complex (polymerase/inhibitor); 2.30A {Thermus aquaticus} SCOP: a.60.7.1 c.120.1.2 c.55.3.5 e.8.1.1 PDB: 1cmw_A 1tau_A* 1taq_A*
Probab=51.15 E-value=5.1 Score=41.05 Aligned_cols=67 Identities=13% Similarity=0.057 Sum_probs=51.0
Q ss_pred Cchhhhhhcc---ccCCCcceeeccccccccccCCCCccHHHHHHHHhCCcCCCCCCCcHHHHHHHHHHHHHHHhhhh
Q 019380 224 GLEHDLDSLR---MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 298 (342)
Q Consensus 224 ~~~~D~~~l~---~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A~~Da~~t~~l~~~~~~~~~ 298 (342)
|+.+|+.+|. +... .+.||+..+..+.|. .++|++|+..| |.. .... ..+||.+|.+|+..+..+..
T Consensus 352 n~K~d~~~L~~~Gi~~~--~~~Dt~laayLl~p~--~~~l~~l~~~~-gk~-~~~~--ya~da~~~~~l~~~l~~~L~ 421 (832)
T 1bgx_T 352 LAKDLSVLALREGLGLP--PGDDPMLLAYLLDPS--NTTPEGVARRY-GGE-WTEE--AGERAALSERLFANLWGRLE 421 (832)
T ss_dssp THHHHHHHHHHHTCCCC--BCCCHHHHHHHHCTT--CCSTTHHHHHH-SCC-CCSS--HHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCCccC--cccCHHHHHHHcCCC--CCCHHHHHHHh-CCC-chHH--HHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 3333 467999888888776 78999999999 643 1111 23799999999999977654
No 446
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=51.09 E-value=8.4 Score=21.18 Aligned_cols=22 Identities=27% Similarity=0.333 Sum_probs=19.2
Q ss_pred cccccccccccCCHHHHHHHHh
Q 019380 14 RHKCVACYKQFKRKDHLIEHMK 35 (342)
Q Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~ 35 (342)
.|.|+.|..+......|+.|-.
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 5899999999999998988864
No 447
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=50.00 E-value=4.8 Score=27.71 Aligned_cols=10 Identities=20% Similarity=0.521 Sum_probs=5.5
Q ss_pred ccccccccCC
Q 019380 81 CNLCMNIFDS 90 (342)
Q Consensus 81 C~~C~k~F~~ 90 (342)
|..|++.|.-
T Consensus 48 C~~C~~~~AG 57 (73)
T 1ffk_W 48 CGHCGYKIAG 57 (73)
T ss_pred CCCCCcEEEC
Confidence 5566655543
No 448
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=49.27 E-value=16 Score=26.76 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=27.7
Q ss_pred CCcccCCCCCcccCCc---------cc---ccccccCChhhHHHHHhhcC
Q 019380 65 GPLSKAHCSGIFSDRG---------CN---LCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 65 ~~~~C~~C~k~f~~~~---------C~---~C~k~F~~~~~L~~H~~~h~ 102 (342)
+...|+.|...+.+-. |+ .|.++|.....|+.|...-|
T Consensus 36 ~~k~Cp~C~~~V~rVe~~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H 85 (101)
T 3vk6_A 36 GDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRH 85 (101)
T ss_dssp TCCBCTTTCCBCSEEEEEEGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHT
T ss_pred cCCCCcCcCCeeeeeEEeccCCEEECCCCCCHHHHhcCHHHHHHHHHHHh
Confidence 3456777766665431 65 59999999999999997544
No 449
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=47.72 E-value=13 Score=37.81 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=29.5
Q ss_pred CcccCCCCCcccCCcccccccccCChhhHHHHHhh-c-----------CCCCCCCCcccccccc
Q 019380 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-C-----------SLSAPVPFKISGAIDE 117 (342)
Q Consensus 66 ~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~-h-----------~~~~~~~~~~c~~~~~ 117 (342)
-..|..|+|.| |.- +.-+..|++-.|+.. . -|+....|..||.+.-
T Consensus 25 ~~~c~~~~~wf----cn~--~~~~~~shi~~hl~~~~~~~~~l~~~~~~~~~~~~c~~c~~~n~ 82 (802)
T 2xzl_A 25 VIKCNSCKKWF----CNT--KNGTSSSHIVNHLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNV 82 (802)
T ss_dssp EEEETTTCCEE----ECC--CSSSSSCHHHHHHHHHTCCCEEECTTSSSCSCBCCCSSSCCCCT
T ss_pred EEEeCCCCcEe----cCC--CCCCCccHHHHHHHHccCCeeeccCCCCCCCceeEeecCCCCce
Confidence 34677888877 322 223466888888742 2 2566667988987655
No 450
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.52 E-value=18 Score=23.42 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=28.7
Q ss_pred CcccCCCCCcccCCcccccccccCChhhHHHHHhhc
Q 019380 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEAC 101 (342)
Q Consensus 66 ~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h 101 (342)
...|.+|+. .....|+.|+..|=.....+.|....
T Consensus 12 ~~~C~vC~~-~~kY~CPrC~~~yCSl~C~k~Hk~~C 46 (56)
T 2yqq_A 12 TVVCVICLE-KPKYRCPACRVPYCSVVCFRKHKEQC 46 (56)
T ss_dssp CCCCTTTCS-CCSEECTTTCCEESSHHHHHHHHHHC
T ss_pred CCccCcCcC-CCeeeCCCCCCCeeCHHHHHHHHhhC
Confidence 345888888 77778999999999999999998763
No 451
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=46.05 E-value=5.2 Score=23.92 Aligned_cols=26 Identities=19% Similarity=0.268 Sum_probs=18.9
Q ss_pred CCCCcccccccccccCCHHHHHHHHhh
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
+.+-.|.|+.|++.|.. ...+.|..-
T Consensus 5 ~~~~~~~C~~C~~~i~~-~~~~EH~D~ 30 (39)
T 2i5o_A 5 AAEDQVPCEKCGSLVPV-WDMPEHMDY 30 (39)
T ss_dssp -CCCEEECTTTCCEEEG-GGHHHHHHH
T ss_pred CcCCCcccccccCcCCc-ccccchhhH
Confidence 35567899999999887 456777755
No 452
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=43.32 E-value=10 Score=23.52 Aligned_cols=9 Identities=33% Similarity=0.615 Sum_probs=4.6
Q ss_pred ccccCcccc
Q 019380 45 KCAVCQKLS 53 (342)
Q Consensus 45 ~C~~C~~~f 53 (342)
.|..||..+
T Consensus 6 ~C~vCGyvy 14 (46)
T 6rxn_A 6 VCNVCGYEY 14 (46)
T ss_dssp EETTTCCEE
T ss_pred ECCCCCeEE
Confidence 455555444
No 453
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=42.79 E-value=19 Score=36.62 Aligned_cols=59 Identities=15% Similarity=0.102 Sum_probs=35.6
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCChhhHHHHHhh-c-----------CCCCCCCCccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-C-----------SLSAPVPFKIS 112 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~-h-----------~~~~~~~~~~c 112 (342)
.|.+|| ...... -..|..|+|.| |.- +.-+..|++-.|+.. . -|+....|..|
T Consensus 8 ~c~~c~--~~~~~~-------~~~~~~~~~~f----cn~--~~~~~~shi~~h~~~~~~~~~~~~~~~~~~~~~~ec~~c 72 (800)
T 2wjy_A 8 ACSYCG--IHDPAC-------VVYCNTSKKWF----CNG--RGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNC 72 (800)
T ss_dssp SCTTTC--CCCGGG-------EEEETTTTEEE----ESC--CTTSSSCHHHHHHHHHTCCCEEECTTSTTCSCBCCCTTT
T ss_pred hccccC--CCCCCe-------EEEcCCCCCcc----ccC--CCCCcccHHHHHHHHccCceEecCCCCCCCCceEEEecc
Confidence 677776 223332 34677888877 332 223456888888642 1 24456679999
Q ss_pred cccccc
Q 019380 113 GAIDEK 118 (342)
Q Consensus 113 ~~~~~~ 118 (342)
|.+.-+
T Consensus 73 ~~~n~f 78 (800)
T 2wjy_A 73 GCRNVF 78 (800)
T ss_dssp CCCCTT
T ss_pred CCCcee
Confidence 877653
No 454
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=41.94 E-value=12 Score=25.78 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=15.5
Q ss_pred cccccccc---CChhhHHHHHhhcCC
Q 019380 81 CNLCMNIF---DSPSSLIKHKEACSL 103 (342)
Q Consensus 81 C~~C~k~F---~~~~~L~~H~~~h~~ 103 (342)
|..|++.+ ...++|.+|++.+|.
T Consensus 32 Ck~C~~~l~~~g~TSnL~rHL~~~H~ 57 (73)
T 2ct5_A 32 CRICMAQIAYSGNTSNLSYHLEKNHP 57 (73)
T ss_dssp ETTTTEECCCCSSTHHHHHHHHHSCH
T ss_pred CCCCCccccCCCChHhHHHHHHHHCH
Confidence 44444443 347899999998774
No 455
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=39.32 E-value=33 Score=23.05 Aligned_cols=46 Identities=20% Similarity=0.362 Sum_probs=27.3
Q ss_pred cc-ccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccccccCChhhHHHHHh
Q 019380 45 KC-AVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE 99 (342)
Q Consensus 45 ~C-~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~ 99 (342)
.| ..|+..+.. ..|..|... .| .+ ....|+.|+..|.. ..|..|..
T Consensus 18 ~C~~~C~~~v~r-~~l~~H~~~--~C---~~--r~v~C~~C~~~~~~-~~l~~H~~ 64 (76)
T 2yuc_A 18 PCPNRCPMKLSR-RDLPAHLQH--DC---PK--RRLKCEFCGCDFSG-EAYESHEG 64 (76)
T ss_dssp BCTTCCSCBCCS-SSSTTTTTT--SC---TT--SCCCCSSSCCCCCH-HHHHHTTT
T ss_pred CCCccccHHhhH-hHHHhhCHh--hC---CC--cceECCCCCCccCH-HHHHHHHh
Confidence 78 578877654 447777521 12 21 12247888887764 45777763
No 456
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=39.11 E-value=13 Score=25.34 Aligned_cols=30 Identities=23% Similarity=0.578 Sum_probs=18.1
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.|..|++.|... .+.+.|..||+.| |..|.
T Consensus 13 ~C~~C~~~F~~~-------~RrHHCR~CG~v~----C~~Cs 42 (73)
T 1vfy_A 13 ACMICSKKFSLL-------NRKHHCRSCGGVF----CQEHS 42 (73)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE----CGGGS
T ss_pred cccCCCCccCCc-------cccccCCCCCEEE----ccccc
Confidence 577777777532 3455677776665 55553
No 457
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=38.75 E-value=11 Score=27.16 Aligned_cols=28 Identities=18% Similarity=0.451 Sum_probs=12.7
Q ss_pred CccccCccccCChhhhhhhcCCCcccCCCCCcc
Q 019380 44 PKCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (342)
Q Consensus 44 ~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (342)
+.|+.|++. .+++...+-|.|..|++.|
T Consensus 37 y~CpfCgk~-----~vkR~a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 37 YFCEFCGKF-----AVKRKAVGIWGCKDCGKVK 64 (92)
T ss_dssp BCCTTTCSS-----CBEEEETTEEECSSSCCEE
T ss_pred ccCcccCCC-----eeEecCcceEEcCCCCCEE
Confidence 356666543 1222224455555444444
No 458
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=37.99 E-value=5.3 Score=40.48 Aligned_cols=48 Identities=21% Similarity=0.195 Sum_probs=33.3
Q ss_pred ccccccccCChhhHHHHHhhcCCCCCCCCccccccccccc--------------CCCCcceecccccc
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAIDEKRT--------------CRGPKAVAMDCEMV 134 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~~~~~--------------~~~~~~v~~D~Ett 134 (342)
|+.|.+.|.++.+-|-| -.|..|+.||..-.... -....+|++.++|.
T Consensus 164 C~~C~~EY~dp~~RRfh------Aqp~aC~~CGP~l~l~~~~~~~~~i~~aa~~L~~G~IVa~pt~t~ 225 (761)
T 3vth_A 164 CEKCSREYHDPHDRRFH------AQPVACFDCGPSLSFVGEGCFDDEIKCVAKALKEGKIVAIKGIGG 225 (761)
T ss_dssp CHHHHHHHTCTTSTTTT------CTTCCCTTTSCCEEEESSCCCSCHHHHHHHHHHTTCCEEEECSSS
T ss_pred CHHHHHHhcCccccccc------CCCCcCCccCCeeEEeCCCCchHHHHHHHHHHHcCCEEEEECCcE
Confidence 99999999998874433 46788999998653211 13345778888875
No 459
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=37.62 E-value=11 Score=27.03 Aligned_cols=28 Identities=18% Similarity=0.452 Sum_probs=12.5
Q ss_pred CccccCccccCChhhhhhhcCCCcccCCCCCcc
Q 019380 44 PKCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (342)
Q Consensus 44 ~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (342)
+.|+.|++.- +++...+-|.|..|++.|
T Consensus 37 y~CpfCgk~~-----vkR~a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 37 YDCSFCGKKT-----VKRGAAGIWTCSCCKKTV 64 (92)
T ss_dssp CCCSSSCSSC-----CEEEETTEEECTTTCCEE
T ss_pred CcCCCCCCce-----eeecccceEEcCCCCCEE
Confidence 3566665331 222224455554444444
No 460
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=37.61 E-value=9.5 Score=26.90 Aligned_cols=28 Identities=25% Similarity=0.589 Sum_probs=12.4
Q ss_pred CccccCccccCChhhhhhhcCCCcccCCCCCcc
Q 019380 44 PKCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (342)
Q Consensus 44 ~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (342)
+.|+.|++. .+++...+-|.|..|++.|
T Consensus 36 y~CpfCGk~-----~vkR~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 36 HTCPVCGRK-----AVKRISTGIWQCQKCGATF 63 (83)
T ss_dssp BCCSSSCSS-----CEEEEETTEEEETTTCCEE
T ss_pred cCCCCCCCc-----eeEecCcCeEEcCCCCCEE
Confidence 356666543 1222224455554444443
No 461
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=36.64 E-value=4.9 Score=39.93 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=23.0
Q ss_pred ccccccccCChhhHHHHHhhcCCCCCCCCccccccc
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAID 116 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~ 116 (342)
|+.|.+.|.++.+-|-| -.|..|+.||..-
T Consensus 70 C~~C~~EY~dp~dRRfH------Aqp~aCp~CGP~l 99 (657)
T 3ttc_A 70 CPACDKEYRDPLDRRFH------AQPVACPECGPYL 99 (657)
T ss_dssp CHHHHHHHHCTTSTTTT------CTTCCCTTTSCCE
T ss_pred ChHHHHHhCCCCCCcCc------CCCCcCcccCccc
Confidence 99999999988773322 4678899998876
No 462
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.23 E-value=89 Score=20.87 Aligned_cols=52 Identities=8% Similarity=0.053 Sum_probs=28.3
Q ss_pred CCcccCCCCCcccCCcccccccccCChhhHHHHHhh-cCCCCCCCCcccccccc
Q 019380 65 GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-CSLSAPVPFKISGAIDE 117 (342)
Q Consensus 65 ~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~-h~~~~~~~~~~c~~~~~ 117 (342)
..+.|+.|...|....--.||..|-.. .+..+.+. ........|+.|.....
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~-Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHSFCQA-CLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCCBCTT-HHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCCcccCCceeCCCCCHHHHH-HHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 345677777666654434577777643 34444432 11223567887765544
No 463
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=34.37 E-value=8 Score=31.41 Aligned_cols=25 Identities=28% Similarity=0.619 Sum_probs=19.5
Q ss_pred ccccccccccCCHHHHHHHHhhhccCCC
Q 019380 15 HKCVACYKQFKRKDHLIEHMKISYHSVH 42 (342)
Q Consensus 15 ~~C~~C~k~f~~~~~L~~H~~~~~H~~~ 42 (342)
|+|..||| +-.-.++.+|++. |...
T Consensus 155 YKCe~CgK-YvDId~~~~Hlk~--Hg~~ 179 (226)
T 2czr_A 155 YKCEECGK-YVDIENLEAHLRE--HGIK 179 (226)
T ss_dssp EECTTTCC-EEEGGGHHHHHHT--TTCC
T ss_pred EehhhcCc-eecHHHHHHHHHH--cCcc
Confidence 79999998 5556778999998 6543
No 464
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=34.29 E-value=14 Score=30.01 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=18.5
Q ss_pred cccccccccCChhhHHHHHhhcC
Q 019380 80 GCNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 80 ~C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
.|..||| +..-.+|..|++.|-
T Consensus 156 KCe~CgK-YvDId~~~~Hlk~Hg 177 (226)
T 2czr_A 156 KCEECGK-YVDIENLEAHLREHG 177 (226)
T ss_dssp ECTTTCC-EEEGGGHHHHHHTTT
T ss_pred ehhhcCc-eecHHHHHHHHHHcC
Confidence 3888887 777889999999876
No 465
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=34.09 E-value=17 Score=25.35 Aligned_cols=30 Identities=30% Similarity=0.620 Sum_probs=19.7
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.|..|++.|... .+.+.|..||+.| |..|.
T Consensus 21 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~----C~~Cs 50 (82)
T 2yw8_A 21 HCRQCEKEFSIS-------RRKHHCRNCGHIF----CNTCS 50 (82)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE----CSGGG
T ss_pred cccCcCCcccCc-------cccccCCCCCCEE----ChHHh
Confidence 688888887622 3455777777766 55554
No 466
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=33.02 E-value=18 Score=27.55 Aligned_cols=30 Identities=27% Similarity=0.564 Sum_probs=18.3
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.|..|+..|... .+.+.|..||..| |..|.
T Consensus 71 ~C~~C~~~Fs~~-------~RrHHCR~CG~vf----C~~Cs 100 (125)
T 1joc_A 71 NCMACGKGFSVT-------VRRHHCRQCGNIF----CAECS 100 (125)
T ss_dssp BCTTTCCBCCSS-------SCCEECTTTCCEE----CGGGS
T ss_pred CCcCcCCccccc-------cccccCCCCCeEE----ChHHh
Confidence 577777777532 3455677777665 55554
No 467
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=32.35 E-value=19 Score=25.20 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=15.8
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (342)
.|..|++.|... .+.+.|..||+.|
T Consensus 23 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~ 47 (84)
T 1z2q_A 23 ACNGCGCVFTTT-------VRRHHCRNCGYVL 47 (84)
T ss_dssp BCTTTCCBCCTT-------SCCEECTTTCCEE
T ss_pred CCcCcCCccccc-------hhcccccCCCcEE
Confidence 577777777642 3445677776665
No 468
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=32.32 E-value=10 Score=27.79 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=5.9
Q ss_pred CCCcccCCCCCcc
Q 019380 64 TGPLSKAHCSGIF 76 (342)
Q Consensus 64 ~~~~~C~~C~k~f 76 (342)
.+-|.|..|++.|
T Consensus 52 ~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 52 VGIWKCKPCKKII 64 (103)
T ss_dssp TTEEEETTTTEEE
T ss_pred cceEEcCCCCCEE
Confidence 4445554444433
No 469
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=32.26 E-value=9.2 Score=26.16 Aligned_cols=6 Identities=33% Similarity=0.944 Sum_probs=2.6
Q ss_pred ccccccc
Q 019380 81 CNLCMNI 87 (342)
Q Consensus 81 C~~C~k~ 87 (342)
|+ ||+.
T Consensus 24 C~-CG~~ 29 (71)
T 1gh9_A 24 CV-CGRT 29 (71)
T ss_dssp ET-TTEE
T ss_pred CC-CCCe
Confidence 44 4443
No 470
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=31.60 E-value=24 Score=29.64 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=12.1
Q ss_pred ccCCCCCcccCC----cccccccccCCh
Q 019380 68 SKAHCSGIFSDR----GCNLCMNIFDSP 91 (342)
Q Consensus 68 ~C~~C~k~f~~~----~C~~C~k~F~~~ 91 (342)
.|..|++.|+-. .|..||+.|-..
T Consensus 163 ~C~~C~~~F~~~~rrhhCr~CG~v~C~~ 190 (220)
T 1dvp_A 163 VCHRCRVEFTFTNRKHHCRNCGQVFCGQ 190 (220)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECST
T ss_pred ccCCCCCccCCcccccccCCcCCEEChH
Confidence 455555555432 255555555543
No 471
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.27 E-value=21 Score=24.96 Aligned_cols=30 Identities=23% Similarity=0.598 Sum_probs=19.4
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.|..|+..|... .+.+.|..||+.| |..|.
T Consensus 16 ~C~~C~~~F~~~-------~RrHHCR~CG~vf----C~~Cs 45 (84)
T 1x4u_A 16 NCTGCSATFSVL-------KKRRSCSNCGNSF----CSRCC 45 (84)
T ss_dssp SCSSSCCCCCSS-------SCCEECSSSCCEE----CTTTS
T ss_pred cCcCcCCccccc-------hhhhhhcCCCcEE----Chhhc
Confidence 688888887532 3455677777766 55553
No 472
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=29.55 E-value=21 Score=27.10 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=16.2
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (342)
.|..|+..|... .+.+.|..||+.|
T Consensus 21 ~C~~C~~~Fs~~-------~RkHHCR~CG~if 45 (120)
T 1y02_A 21 SCKSCGAHFANT-------ARKQTCLDCKKNF 45 (120)
T ss_dssp CCTTTCCCCSSG-------GGCEECTTTCCEE
T ss_pred cccCcCCccccc-------cccccCCCCCCee
Confidence 688888887643 2344677777765
No 473
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=29.51 E-value=24 Score=25.03 Aligned_cols=30 Identities=27% Similarity=0.640 Sum_probs=20.1
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.|..|+..|... .+.+.|..||+.| |..|.
T Consensus 11 ~C~~C~~~F~~~-------~RrHHCR~CG~vf----C~~Cs 40 (88)
T 1wfk_A 11 RCYGCAVKFTLF-------KKEYGCKNCGRAF----CNGCL 40 (88)
T ss_dssp BCTTTCCBCCSS-------SCEEECSSSCCEE----ETTTS
T ss_pred CCcCcCCcccCc-------cccccCCCCCCEE----ChhHc
Confidence 688888888743 3455677777766 55553
No 474
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=28.64 E-value=22 Score=26.74 Aligned_cols=24 Identities=13% Similarity=0.337 Sum_probs=14.7
Q ss_pred ccccccccCChhhHHHHHhhcCCCCCC-CCccccccc
Q 019380 81 CNLCMNIFDSPSSLIKHKEACSLSAPV-PFKISGAID 116 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~~~~~~-~~~~c~~~~ 116 (342)
|..||+.|... ..+. .|+.|+...
T Consensus 76 C~~CG~~~e~~------------~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 76 CKDCSHVFKPN------------ALDYGVCEKCHSKN 100 (119)
T ss_dssp CSSSSCEECSC------------CSTTCCCSSSSSCC
T ss_pred cCCCCCEEeCC------------CCCCCcCccccCCC
Confidence 67777766642 2355 677776653
No 475
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=28.50 E-value=24 Score=22.63 Aligned_cols=11 Identities=27% Similarity=0.676 Sum_probs=6.6
Q ss_pred CccccCccccC
Q 019380 44 PKCAVCQKLSK 54 (342)
Q Consensus 44 ~~C~~C~~~f~ 54 (342)
+.|..||+.+.
T Consensus 4 y~C~vCGyvYd 14 (54)
T 4rxn_A 4 YTCTVCGYIYD 14 (54)
T ss_dssp EEETTTCCEEC
T ss_pred eECCCCCeEEC
Confidence 35666766554
No 476
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=28.37 E-value=59 Score=20.76 Aligned_cols=47 Identities=26% Similarity=0.466 Sum_probs=24.8
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCccccc-ccccCChhhHHHHHhhc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLC-MNIFDSPSSLIKHKEAC 101 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C-~k~F~~~~~L~~H~~~h 101 (342)
.|.+|.....+...|..|. ..|+ +..||.| .-.....+.|+.|.++.
T Consensus 5 vC~~C~~ECET~kEl~~H~---~sCp-------~gqCPYC~~~~e~tesAlQaHfkvC 52 (57)
T 2k9h_A 5 VCDVCHHECETAKELESHR---QSCI-------NGQCPYCMTITEATESALQAHYSIC 52 (57)
T ss_dssp BCTTTCCBCSSTTTHHHHH---HHHT-------TTBCTTTCCBCCSSHHHHHHHHTTC
T ss_pred hhhHHHhhhhhHHHHHHHh---ccCC-------CCCCCcccCcCCcCHHHHHHHHHHh
Confidence 4666666666666666664 1110 0024444 23345677777777653
No 477
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=28.31 E-value=27 Score=29.53 Aligned_cols=31 Identities=26% Similarity=0.577 Sum_probs=0.0
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCccccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMN 86 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~k 86 (342)
.|..|+..|... .+.+.|+.||..| |..|..
T Consensus 166 ~C~~C~~~F~~~-------~RrhHCR~CG~v~----C~~Cs~ 196 (226)
T 3zyq_A 166 ECHRCRVQFGVM-------TRKHHCRACGQIF----CGKCSS 196 (226)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE----CTTTCC
T ss_pred CCcCcCCCCCcc-------ccccccCCCcCEe----ChhhcC
No 478
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=28.27 E-value=10 Score=38.41 Aligned_cols=65 Identities=17% Similarity=0.360 Sum_probs=40.5
Q ss_pred ccccCccccCChhhhhhhcCCCc-ccCCCCCcccCC----------------cccccccccCChhhHHHHHhhcCCCCCC
Q 019380 45 KCAVCQKLSKSFESLREHLTGPL-SKAHCSGIFSDR----------------GCNLCMNIFDSPSSLIKHKEACSLSAPV 107 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~-~C~~C~k~f~~~----------------~C~~C~k~F~~~~~L~~H~~~h~~~~~~ 107 (342)
.|..|-+-...+.+ +++ .=|| -|-.||=+|+=. -|+.|.+.|..+.+-|-| -.|.
T Consensus 108 ~C~~Cl~e~~dp~~-rry-~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~dRRfh------Aqp~ 179 (772)
T 4g9i_A 108 ICDDCLRELFDPTN-KRY-MYPFIVCTNCGPRFTIIEDLPYDRENTTMKEFPMCDFCRSEYEDPLNRRYH------AEPT 179 (772)
T ss_dssp CCHHHHHHHSSTTS-TTT-TCTTCCCTTSSCCGGGCCSSSCCGGGSGGGGSCCCHHHHHHHHCSSSTTTT------CTTC
T ss_pred hhHHHHHHhcCCCC-Ccc-CCccccCCCCCchhhhhhcCCCCCCCCcCCCCCCChhHHHHhCCCCCCCCc------CCCC
Confidence 67777655554443 111 1122 256677666532 199999999998874433 4688
Q ss_pred CCcccccccc
Q 019380 108 PFKISGAIDE 117 (342)
Q Consensus 108 ~~~~c~~~~~ 117 (342)
.|+.||..-.
T Consensus 180 aC~~CGP~l~ 189 (772)
T 4g9i_A 180 ACPVCGPSYR 189 (772)
T ss_dssp CCTTTSCCEE
T ss_pred CCccCCceEE
Confidence 9999997644
No 479
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=27.26 E-value=26 Score=27.38 Aligned_cols=58 Identities=22% Similarity=0.475 Sum_probs=34.2
Q ss_pred ccccccccccCCHHHHHHHHhhhccCCCC----C-ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQ----P-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 15 ~~C~~C~k~f~~~~~L~~H~~~~~H~~~~----~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.+|+-|++-|.-.--..+.. . |.-.+ . .|..|++...-. -.|+.|+..|...-|..|.
T Consensus 28 lr~pCC~k~y~Cr~CHde~~-d--H~l~r~~~~~vlCg~C~~~q~~~----------~~C~~Cg~~f~~Y~C~~C~ 90 (143)
T 2dkt_A 28 LKAPCCDKLYTCRLCHDTNE-D--HQLDRFKVKEVQCINCEKLQHAQ----------QTCEDCSTLFGEYYCSICH 90 (143)
T ss_dssp EEETTTTEEESSHHHHHHTS-S--SCCCSSSCCCEEESSSCCEECSC----------SBCSSSCCBSCSEECSSSC
T ss_pred EECCCCCCccchhhhhcccc-c--cccchhccceeeecccCcccccc----------CcCCCCCccceeeEeceee
Confidence 45666777776654333211 2 43332 2 577776554321 1588888888888888884
No 480
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=27.05 E-value=53 Score=21.30 Aligned_cols=14 Identities=21% Similarity=0.648 Sum_probs=8.0
Q ss_pred CCCccccccccccc
Q 019380 11 STARHKCVACYKQF 24 (342)
Q Consensus 11 ~~~~~~C~~C~k~f 24 (342)
.+....|++|...|
T Consensus 11 ~~~~~~C~IC~~~~ 24 (69)
T 2kiz_A 11 EDTEEKCTICLSIL 24 (69)
T ss_dssp TTCCCSBTTTTBCC
T ss_pred CCCCCCCeeCCccc
Confidence 44456677775544
No 481
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=26.92 E-value=28 Score=21.57 Aligned_cols=6 Identities=33% Similarity=1.298 Sum_probs=3.1
Q ss_pred ccccCc
Q 019380 45 KCAVCQ 50 (342)
Q Consensus 45 ~C~~C~ 50 (342)
.|+.|+
T Consensus 7 ~CP~C~ 12 (50)
T 1pft_A 7 VCPACE 12 (50)
T ss_dssp SCTTTS
T ss_pred eCcCCC
Confidence 455554
No 482
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.84 E-value=41 Score=23.82 Aligned_cols=45 Identities=7% Similarity=0.073 Sum_probs=30.9
Q ss_pred CcccCCCCCcccCCccc-ccccccCChhhHHHHHhhcC-CCCCCCCcc
Q 019380 66 PLSKAHCSGIFSDRGCN-LCMNIFDSPSSLIKHKEACS-LSAPVPFKI 111 (342)
Q Consensus 66 ~~~C~~C~k~f~~~~C~-~C~k~F~~~~~L~~H~~~h~-~~~~~~~~~ 111 (342)
.+.|+.|...|...-.. .||.+|-.. .+..+...+. ......|++
T Consensus 7 ~~~CPI~~~~~~dPV~~~~cGh~f~r~-cI~~~l~~~~~~~~~~~CP~ 53 (94)
T 2yu4_A 7 GFTCPITKEEMKKPVKNKVCGHTYEED-AIVRMIESRQKRKKKAYCPQ 53 (94)
T ss_dssp CCBCTTTCSBCSSEEEESSSCCEEEHH-HHHHHHHHHHTTTCCBCCCS
T ss_pred EeECcCcCchhcCCEEcCCCCCeecHH-HHHHHHHHccCcCCCCCCCc
Confidence 57788888888887665 599998854 4566665542 234567777
No 483
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=26.72 E-value=28 Score=24.72 Aligned_cols=30 Identities=23% Similarity=0.547 Sum_probs=19.2
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCcccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~ 85 (342)
.|..|++.|... .+.+.|..||..| |..|.
T Consensus 22 ~C~~C~~~F~~~-------~RrhhCr~CG~v~----C~~Cs 51 (90)
T 3t7l_A 22 NCMNCQVKFTFT-------KRRHHCRACGKVF----CGVCC 51 (90)
T ss_dssp BCTTTCCBCCSS-------SCCEECTTTCCEE----CGGGS
T ss_pred cCcCCCCcccch-------hhCccccCCCCEE----CCccc
Confidence 588888877632 3455677777765 55553
No 484
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=26.63 E-value=15 Score=25.78 Aligned_cols=23 Identities=22% Similarity=0.392 Sum_probs=13.6
Q ss_pred CcccCCCCCcccCCc-cccccccc
Q 019380 66 PLSKAHCSGIFSDRG-CNLCMNIF 88 (342)
Q Consensus 66 ~~~C~~C~k~f~~~~-C~~C~k~F 88 (342)
.+.|..|++.|.... ||.||...
T Consensus 18 ~~~C~~C~~~~~~~afCPeCgq~L 41 (81)
T 2jrp_A 18 TAHCETCAKDFSLQALCPDCRQPL 41 (81)
T ss_dssp EEECTTTCCEEEEEEECSSSCSCC
T ss_pred ceECccccccCCCcccCcchhhHH
Confidence 445677776665433 77776543
No 485
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=26.30 E-value=22 Score=28.66 Aligned_cols=12 Identities=33% Similarity=0.373 Sum_probs=6.9
Q ss_pred CCCCCCcccccc
Q 019380 104 SAPVPFKISGAI 115 (342)
Q Consensus 104 ~~~~~~~~c~~~ 115 (342)
+.|..||+|+..
T Consensus 151 ~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 151 EAPEYCPVCGAP 162 (170)
T ss_dssp CCCSBCTTTCCB
T ss_pred CCCCCCCCCCCC
Confidence 445566666643
No 486
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=25.29 E-value=14 Score=26.74 Aligned_cols=36 Identities=19% Similarity=0.473 Sum_probs=23.4
Q ss_pred ccccCccccCChhhhhhhcCCCcccCCCCCcccCCc-ccccccc
Q 019380 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRG-CNLCMNI 87 (342)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~-C~~C~k~ 87 (342)
.|+.|+...... .+.+.|..|++.|.... ||.|+..
T Consensus 34 ~CP~Cq~eL~~~-------g~~~hC~~C~~~f~~~a~CPdC~q~ 70 (101)
T 2jne_A 34 HCPQCQHVLDQD-------NGHARCRSCGEFIEMKALCPDCHQP 70 (101)
T ss_dssp BCSSSCSBEEEE-------TTEEEETTTCCEEEEEEECTTTCSB
T ss_pred cCccCCCcceec-------CCEEECccccchhhccccCcchhhH
Confidence 688886554322 34556888888877654 8888753
No 487
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=24.32 E-value=59 Score=24.60 Aligned_cols=27 Identities=19% Similarity=0.509 Sum_probs=24.6
Q ss_pred CCCCcccccccccccCCHHHHHHHHhh
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKI 36 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~ 36 (342)
.++-+..|=.|.++|.+...+..|++.
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~ 37 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKL 37 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHH
Confidence 566789999999999999999999998
No 488
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=24.12 E-value=39 Score=21.35 Aligned_cols=11 Identities=27% Similarity=0.452 Sum_probs=6.3
Q ss_pred CccccCccccC
Q 019380 44 PKCAVCQKLSK 54 (342)
Q Consensus 44 ~~C~~C~~~f~ 54 (342)
+.|..||..+.
T Consensus 4 y~C~~CGyvYd 14 (52)
T 1e8j_A 4 YVCTVCGYEYD 14 (52)
T ss_dssp EECSSSCCCCC
T ss_pred EEeCCCCeEEc
Confidence 35666665543
No 489
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=23.73 E-value=26 Score=30.49 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=27.6
Q ss_pred CCCCcccccccccccCCHHHHHHHHhhhccCCCCCccccCccccCChhhhhhhc--CCCcccCC--CCCccc
Q 019380 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHL--TGPLSKAH--CSGIFS 77 (342)
Q Consensus 10 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~--~~~~~C~~--C~k~f~ 77 (342)
.+...+.|+.|...|..+- ....||..|.... +..+. .+.+.|+. |++.+.
T Consensus 177 ~~~~el~CPIcl~~f~DPV----------------ts~~CGHsFcR~c-I~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 177 GGKIELTCPITCKPYEAPL----------------ISRKCNHVFDRDG-IQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp SSBCCSBCTTTSSBCSSEE----------------EESSSCCEEEHHH-HHHHSTTCSCEECSGGGCSCEEC
T ss_pred CCceeeECcCccCcccCCe----------------eeCCCCCcccHHH-HHHHHHhCCCCCCCcccccCcCc
Confidence 3456688999987664311 2235666665443 33343 23456665 655543
No 490
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=23.14 E-value=37 Score=22.19 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=23.0
Q ss_pred CcccCCCCC---cccCCcccccccccCChhhHHHHH
Q 019380 66 PLSKAHCSG---IFSDRGCNLCMNIFDSPSSLIKHK 98 (342)
Q Consensus 66 ~~~C~~C~k---~f~~~~C~~C~k~F~~~~~L~~H~ 98 (342)
...|.+|+. .+....|+.|+..|=.....+.|.
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~Hk 46 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHG 46 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTCCEESSHHHHHHHC
T ss_pred CCcCcCCCCCcCCCccccCcCCCCCccChHHHHHHh
Confidence 345677764 455556888888888877787774
No 491
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=23.12 E-value=35 Score=34.75 Aligned_cols=25 Identities=28% Similarity=0.562 Sum_probs=14.8
Q ss_pred CcccccccccccCCHHHHHHHHhhhccCCCCC-ccccCcccc
Q 019380 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS 53 (342)
Q Consensus 13 ~~~~C~~C~k~f~~~~~L~~H~~~~~H~~~~~-~C~~C~~~f 53 (342)
.++.|..||- |...-- +|..|+|=|
T Consensus 10 ~~~~c~yc~~----------------~~~~~~~~c~~~~~wf 35 (802)
T 2xzl_A 10 SDNSCAYCGI----------------DSAKCVIKCNSCKKWF 35 (802)
T ss_dssp --CCCTTTCC----------------CCTTTEEEETTTCCEE
T ss_pred ChhhCcccCC----------------CCCceEEEeCCCCcEe
Confidence 3788888874 333322 677777766
No 492
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=23.02 E-value=19 Score=29.65 Aligned_cols=10 Identities=10% Similarity=-0.051 Sum_probs=5.3
Q ss_pred CCCCcccccc
Q 019380 106 PVPFKISGAI 115 (342)
Q Consensus 106 ~~~~~~c~~~ 115 (342)
|-.||+|+..
T Consensus 171 p~~CP~C~~~ 180 (191)
T 1lko_A 171 PELCPACAHP 180 (191)
T ss_dssp CSBCTTTCCB
T ss_pred CCCCCCCcCC
Confidence 3456666544
No 493
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=22.39 E-value=23 Score=23.18 Aligned_cols=22 Identities=27% Similarity=0.615 Sum_probs=12.8
Q ss_pred ccccccccCChhhHHHHHhhcC
Q 019380 81 CNLCMNIFDSPSSLIKHKEACS 102 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H~~~h~ 102 (342)
|+.|+..|=....+-.|...|+
T Consensus 33 C~~C~~~FC~dCD~fiHe~Lh~ 54 (59)
T 1z60_A 33 CAVCQNVFCVDCDVFVHDSLHS 54 (59)
T ss_dssp CTTTTCCBCHHHHHTTTTTSCS
T ss_pred CCccCcCcccchhHHHHhhccC
Confidence 6666666665555556655553
No 494
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=22.29 E-value=38 Score=28.34 Aligned_cols=9 Identities=33% Similarity=0.829 Sum_probs=4.7
Q ss_pred ccccccccC
Q 019380 81 CNLCMNIFD 89 (342)
Q Consensus 81 C~~C~k~F~ 89 (342)
|..|++.|+
T Consensus 164 C~~C~~~F~ 172 (220)
T 1dvp_A 164 CHRCRVEFT 172 (220)
T ss_dssp CTTTCCBCC
T ss_pred cCCCCCccC
Confidence 555555554
No 495
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=22.07 E-value=34 Score=23.44 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=13.1
Q ss_pred ccccccccCChhhHHHH
Q 019380 81 CNLCMNIFDSPSSLIKH 97 (342)
Q Consensus 81 C~~C~k~F~~~~~L~~H 97 (342)
|+.||..+......++-
T Consensus 39 C~~CGE~~~~~e~~~~~ 55 (78)
T 3ga8_A 39 CVHCEESIMNKEESDAF 55 (78)
T ss_dssp ETTTCCEECCHHHHHHH
T ss_pred CCCCCCEEECHHHHHHH
Confidence 88999888887766553
No 496
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=21.20 E-value=66 Score=27.40 Aligned_cols=47 Identities=6% Similarity=-0.047 Sum_probs=33.2
Q ss_pred CCcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCccccccc
Q 019380 65 GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAID 116 (342)
Q Consensus 65 ~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~~ 116 (342)
..+.|+.|...|...-...||.+|-... +..+..... ..|+.|+...
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~-i~~~~~~~~----~~cP~~~~~~ 253 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKD-IEEHLQRVG----HFNPVTRSPL 253 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTH-HHHHHHHTC----SSCTTTCCCC
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHH-HHHHHHHCC----CCCcCCCCCC
Confidence 3578999999999887777999998654 666765421 2277776543
No 497
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=21.05 E-value=23 Score=24.96 Aligned_cols=10 Identities=30% Similarity=0.916 Sum_probs=5.5
Q ss_pred ccccCccccC
Q 019380 45 KCAVCQKLSK 54 (342)
Q Consensus 45 ~C~~C~~~f~ 54 (342)
.|.+|++.|.
T Consensus 31 pCRvC~RvfH 40 (89)
T 1wil_A 31 PCRVCTRVFH 40 (89)
T ss_dssp SCSSSSSCCC
T ss_pred cccccccccc
Confidence 5555555553
No 498
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=20.99 E-value=78 Score=21.83 Aligned_cols=44 Identities=9% Similarity=0.079 Sum_probs=29.9
Q ss_pred CcccCCCCCcccCCcccccccccCChhhHHHHHhhcCCCCCCCCcccccc
Q 019380 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFKISGAI 115 (342)
Q Consensus 66 ~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~~~c~~~ 115 (342)
.+.|+.|...|...-.-.||.+|-+ ..+..+... ...|+.|+..
T Consensus 14 ~~~CpI~~~~m~dPV~~~cGhtf~r-~~I~~~l~~-----~~~cP~~~~~ 57 (85)
T 2kr4_A 14 EFRDPLMDTLMTDPVRLPSGTVMDR-SIILRHLLN-----SPTDPFNRQM 57 (85)
T ss_dssp TTBCTTTCSBCSSEEECTTSCEEEH-HHHHHHHHH-----CSBCTTTCCB
T ss_pred heECcccCchhcCCeECCCCCEECH-HHHHHHHhc-----CCCCCCCcCC
Confidence 5678888888887765568888874 456667653 2467766544
No 499
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.67 E-value=1.2e+02 Score=20.13 Aligned_cols=52 Identities=8% Similarity=0.069 Sum_probs=28.7
Q ss_pred CCcccCCCCCcccCCcccccccccCChhhHHHHHhhcC-CCCCCCCcccccccc
Q 019380 65 GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACS-LSAPVPFKISGAIDE 117 (342)
Q Consensus 65 ~~~~C~~C~k~f~~~~C~~C~k~F~~~~~L~~H~~~h~-~~~~~~~~~c~~~~~ 117 (342)
..+.|+.|...|....--.||..|-. ..+..+.+... ......|+.|.....
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~-~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHSFCR-ACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCCBCH-HHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred cCCCCcCCChhhCcceeCCCCCHHHH-HHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 45567777766665443347777763 34555544322 233557777765533
No 500
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=20.57 E-value=32 Score=24.06 Aligned_cols=11 Identities=9% Similarity=0.190 Sum_probs=4.9
Q ss_pred CcccCCCCCcc
Q 019380 66 PLSKAHCSGIF 76 (342)
Q Consensus 66 ~~~C~~C~k~f 76 (342)
.|.|..|+..+
T Consensus 27 ~y~C~vCGyvY 37 (81)
T 2kn9_A 27 LFRCIQCGFEY 37 (81)
T ss_dssp EEEETTTCCEE
T ss_pred eEEeCCCCEEE
Confidence 34454444433
Done!