Your job contains 1 sequence.
>019381
MEQQRNQKTVQQQQQEELEEIQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPR
KELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGV
ETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
YGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHAST
TRLALRKGRGEERICKVISSPCLAEAEARFQISAQGVADVKD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019381
(342 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147092 - symbol:RAD51 species:3702 "Arabidops... 1512 4.4e-155 1
UNIPROTKB|Q06609 - symbol:RAD51 "DNA repair protein RAD51... 1242 1.8e-126 1
UNIPROTKB|B0M1M6 - symbol:pigRAD51 "Rad51" species:9823 "... 1241 2.3e-126 1
UNIPROTKB|Q2KJ94 - symbol:RAD51 "DNA repair protein RAD51... 1238 4.8e-126 1
UNIPROTKB|Q8MKI8 - symbol:RAD51 "DNA repair protein RAD51... 1238 4.8e-126 1
UNIPROTKB|P70099 - symbol:RAD51 "DNA repair protein RAD51... 1238 4.8e-126 1
MGI|MGI:97890 - symbol:Rad51 "RAD51 homolog" species:1009... 1237 6.1e-126 1
UNIPROTKB|G1K2Z8 - symbol:RAD51 "Uncharacterized protein"... 1232 2.1e-125 1
UNIPROTKB|P37383 - symbol:RAD51A "DNA repair protein RAD5... 1232 2.1e-125 1
UNIPROTKB|O77507 - symbol:RAD51 "DNA repair protein RAD51... 1229 4.3e-125 1
ZFIN|ZDB-GENE-040426-2286 - symbol:rad51 "RAD51 homolog (... 1229 4.3e-125 1
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 1179 8.5e-120 1
UNIPROTKB|A3E3X4 - symbol:rad51 "Rad51" species:4754 "Pne... 1171 6.0e-119 1
UNIPROTKB|A3E3X6 - symbol:rad51 "Rad51" species:263815 "P... 1171 6.0e-119 1
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 1166 2.0e-118 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 1102 1.2e-111 1
ASPGD|ASPL0000057020 - symbol:uvsC species:162425 "Emeric... 1095 6.8e-111 1
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 1086 6.1e-110 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 1086 6.1e-110 1
DICTYBASE|DDB_G0273611 - symbol:rad51-2 "putative DNA rep... 1055 1.2e-106 1
DICTYBASE|DDB_G0273139 - symbol:rad51-1 "putative DNA rep... 1055 1.2e-106 1
GENEDB_PFALCIPARUM|PF11_0087 - symbol:PF11_0087 "Rad51 ho... 987 1.9e-99 1
UNIPROTKB|Q8IIS8 - symbol:Rad51 "Rad51 homolog" species:3... 987 1.9e-99 1
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 983 5.0e-99 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 952 9.7e-96 1
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 952 9.7e-96 1
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 952 9.7e-96 1
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 846 1.7e-84 1
UNIPROTKB|Q50LF6 - symbol:tilDmc1 "RecA homolog Dmc1" spe... 831 6.4e-83 1
GENEDB_PFALCIPARUM|MAL8P1.76 - symbol:MAL8P1.76 "meiotic ... 820 9.4e-82 1
UNIPROTKB|Q8IB05 - symbol:MAL8P1.76 "Meiotic recombinatio... 820 9.4e-82 1
ZFIN|ZDB-GENE-060331-93 - symbol:dmc1 "DMC1 dosage suppre... 819 1.2e-81 1
UNIPROTKB|Q50LF7 - symbol:eDmc1 "RecA homolog DMC1" speci... 813 5.2e-81 1
UNIPROTKB|Q9DGC3 - symbol:Dmc1 "DMC1" species:8330 "Cynop... 810 1.1e-80 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 808 1.8e-80 1
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 807 2.2e-80 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 807 2.2e-80 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 806 2.9e-80 1
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 806 2.9e-80 1
RGD|1307611 - symbol:Dmc1 "DMC1 dosage suppressor of mck1... 805 3.7e-80 1
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 804 4.7e-80 1
UNIPROTKB|F1NI95 - symbol:DMC1 "Uncharacterized protein" ... 799 1.6e-79 1
UNIPROTKB|Q6FKF0 - symbol:CAGL0L12100g "Similar to unipro... 789 1.8e-78 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 785 4.8e-78 1
UNIPROTKB|Q74ZU7 - symbol:AGR101C "AGR101Cp" species:2848... 781 1.3e-77 1
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 775 5.5e-77 1
SGD|S000000981 - symbol:DMC1 "Meiosis-specific protein re... 775 5.5e-77 1
UNIPROTKB|Q9GRA3 - symbol:CnDmc1 "DMC1 homologue CnDMC1" ... 774 7.1e-77 1
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 772 1.1e-76 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 768 3.1e-76 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 765 6.3e-76 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 765 6.3e-76 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 765 6.3e-76 1
RGD|1563603 - symbol:Rad51 "RAD51 homolog (S. cerevisiae)... 749 3.1e-74 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 724 1.4e-71 1
UNIPROTKB|B4DMW6 - symbol:DMC1 "Meiotic recombination pro... 346 7.7e-64 2
UNIPROTKB|E2R3A3 - symbol:DMC1 "Uncharacterized protein" ... 345 9.9e-64 2
UNIPROTKB|E9PNT5 - symbol:RAD51 "DNA repair protein RAD51... 588 3.6e-57 1
UNIPROTKB|Q0U9F0 - symbol:SNOG_11614 "Putative uncharacte... 519 7.4e-50 1
UNIPROTKB|E9PJ30 - symbol:RAD51 "DNA repair protein RAD51... 460 1.3e-43 1
UNIPROTKB|B0QYE0 - symbol:DMC1 "Meiotic recombination pro... 323 2.5e-41 2
UNIPROTKB|B0QYE1 - symbol:DMC1 "Meiotic recombination pro... 311 8.2e-28 1
UNIPROTKB|O15315 - symbol:RAD51B "DNA repair protein RAD5... 260 6.4e-26 2
ZFIN|ZDB-GENE-041010-204 - symbol:rad51c "rad51 homolog C... 288 2.2e-25 1
UNIPROTKB|C9JYJ0 - symbol:RAD51B "DNA repair protein RAD5... 260 2.9e-25 2
UNIPROTKB|E1BE93 - symbol:RAD51B "Uncharacterized protein... 252 5.6e-25 2
MGI|MGI:1099436 - symbol:Rad51b "RAD51 homolog B" species... 247 5.6e-25 2
TAIR|locus:2174577 - symbol:XRCC3 "homolog of X-ray repai... 231 1.8e-22 2
UNIPROTKB|J9NV21 - symbol:DMC1 "Uncharacterized protein" ... 253 1.1e-21 1
UNIPROTKB|F1S9W9 - symbol:XRCC3 "Uncharacterized protein"... 235 1.6e-19 1
ZFIN|ZDB-GENE-040426-2750 - symbol:rad51b "RAD51 homolog ... 235 3.0e-19 1
UNIPROTKB|F1SA21 - symbol:RAD51B "Uncharacterized protein... 230 3.1e-19 1
UNIPROTKB|Q08DH8 - symbol:XRCC3 "DNA repair protein XRCC3... 230 2.4e-18 1
UNIPROTKB|Q8R2J9 - symbol:RAD51C "DNA repair protein RAD5... 157 3.3e-18 2
UNIPROTKB|E1BVI8 - symbol:RAD51B "Uncharacterized protein... 219 4.6e-18 1
UNIPROTKB|O43542 - symbol:XRCC3 "DNA repair protein XRCC3... 225 2.1e-17 1
UNIPROTKB|O43502 - symbol:RAD51C "DNA repair protein RAD5... 149 2.2e-17 2
UNIPROTKB|E2R3P3 - symbol:RAD51B "Uncharacterized protein... 212 2.5e-17 1
DICTYBASE|DDB_G0284507 - symbol:DDB_G0284507 "putative Ra... 223 7.3e-17 1
UNIPROTKB|F1MW99 - symbol:RAD51C "Uncharacterized protein... 223 7.4e-17 1
MGI|MGI:2150020 - symbol:Rad51c "RAD51 homolog C" species... 148 1.1e-16 2
UNIPROTKB|F1PMI7 - symbol:RAD51C "Uncharacterized protein... 146 1.2e-16 2
RGD|1563765 - symbol:Rad51c "Rad51 homolog c (S. cerevisi... 149 1.3e-16 2
RGD|1560681 - symbol:Rad51b "RAD51 homolog B (S. cerevisi... 206 1.3e-16 1
UNIPROTKB|J3QKK3 - symbol:RAD51C "DNA repair protein RAD5... 149 4.3e-16 2
ZFIN|ZDB-GENE-050320-116 - symbol:xrcc3 "X-ray repair com... 215 6.3e-16 1
UNIPROTKB|Q5ZM26 - symbol:XRCC3 "Uncharacterized protein"... 214 7.8e-16 1
UNIPROTKB|F1M525 - symbol:Rad51c "Protein Rad51c" species... 136 3.3e-15 2
DICTYBASE|DDB_G0283637 - symbol:xrcc3 "putative DNA repai... 168 7.4e-15 2
UNIPROTKB|H7C1R0 - symbol:RAD51C "DNA repair protein RAD5... 190 1.0e-14 1
UNIPROTKB|E2RAE7 - symbol:XRCC3 "Uncharacterized protein"... 204 1.7e-14 1
UNIPROTKB|Q2HJ51 - symbol:RAD51D "DNA repair protein RAD5... 202 2.1e-14 1
MGI|MGI:1261809 - symbol:Rad51d "RAD51 homolog D" species... 202 2.2e-14 1
UNIPROTKB|E2RP02 - symbol:RAD51D "Uncharacterized protein... 201 2.9e-14 1
UNIPROTKB|F1S262 - symbol:RAD51C "Uncharacterized protein... 154 5.7e-14 2
ASPGD|ASPL0000051939 - symbol:AN10145 species:162425 "Eme... 203 8.5e-14 1
UNIPROTKB|E9PI54 - symbol:RAD51 "DNA repair protein RAD51... 178 2.4e-13 1
UNIPROTKB|Q9NZG9 - symbol:RAD51 "RAD51" species:9606 "Hom... 178 2.4e-13 1
FB|FBgn0003480 - symbol:spn-B "spindle B" species:7227 "D... 193 3.6e-13 1
UNIPROTKB|E1BRQ1 - symbol:RAD51C "Uncharacterized protein... 194 3.8e-13 1
WARNING: Descriptions of 40 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2147092 [details] [associations]
symbol:RAD51 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010332 "response to gamma radiation" evidence=IEP;RCA]
[GO:0006302 "double-strand break repair" evidence=RCA;IMP]
[GO:0006259 "DNA metabolic process" evidence=IDA;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009555
"pollen development" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IDA] [GO:0009314 "response to radiation"
evidence=NAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163
SMART:SM00278 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003684
GO:GO:0010332 EMBL:AF296834 GO:GO:0045003 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K04482 EMBL:U43652 EMBL:AJ001100 EMBL:U43528
IPI:IPI00532326 RefSeq:NP_568402.1 UniGene:At.110
ProteinModelPortal:P94102 SMR:P94102 DIP:DIP-31780N IntAct:P94102
STRING:P94102 EnsemblPlants:AT5G20850.1 GeneID:832208
KEGG:ath:AT5G20850 GeneFarm:4757 TAIR:At5g20850 InParanoid:P94102
OMA:MMAESRY PhylomeDB:P94102 ProtClustDB:PLN03186
Genevestigator:P94102 GermOnline:AT5G20850 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 Uniprot:P94102
Length = 342
Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
Identities = 293/320 (91%), Positives = 312/320 (97%)
Query: 23 HGPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS 82
HGPFPVEQLQA+GIA++DVKKL+DAGLCTVE VAY+PRK+LLQIKGIS+AKVDKI+EAAS
Sbjct: 23 HGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAAS 82
Query: 83 KLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHT 142
KLVPLGFTSA+QLHAQR EIIQITSGSRELDK+LEGG+ETGSITE+YGEFRSGKTQLCHT
Sbjct: 83 KLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHT 142
Query: 143 LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDH 202
LCVTCQLP+DQGGGEGKAMYIDAEGTFRPQRLLQIADR+GLNGADVLENVAYARAYNTDH
Sbjct: 143 LCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDH 202
Query: 203 QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
QSRLLLEAASMM+ETRFAL+IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF
Sbjct: 203 QSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
Query: 263 GVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPC 322
GVAVVITNQVVAQVDGSA+FAGPQ KPIGGNIMAHA+TTRLALRKGR EERICKVISSPC
Sbjct: 263 GVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLALRKGRAEERICKVISSPC 322
Query: 323 LAEAEARFQISAQGVADVKD 342
L EAEARFQIS +GV D KD
Sbjct: 323 LPEAEARFQISTEGVTDCKD 342
>UNIPROTKB|Q06609 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0016605 "PML body" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=TAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI]
Reactome:REACT_216 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_111183 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 MIM:114480 GO:GO:0006312
Pathway_Interaction_DB:bard1pathway GO:GO:0007131 Orphanet:145
SUPFAM:SSF47794 GO:GO:0000800 PDB:1N0W PDBsum:1N0W EMBL:AC022405
EMBL:CH471125 EMBL:AC012476 Orphanet:238722 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 GO:GO:0000730 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13804 EMBL:D14134 EMBL:AF165094
EMBL:AF165088 EMBL:AF165089 EMBL:AF165090 EMBL:AF165091
EMBL:AF165092 EMBL:AF165093 EMBL:AF233744 EMBL:AF233740
EMBL:AF233741 EMBL:AF233742 EMBL:AF236021 EMBL:AF233743
EMBL:EU362635 EMBL:AY196785 EMBL:AK131299 EMBL:AK291969
EMBL:AK313503 EMBL:CR536559 EMBL:BC001459 IPI:IPI00032201
IPI:IPI00220649 IPI:IPI00553199 IPI:IPI01010370 PIR:I58295
RefSeq:NP_001157741.1 RefSeq:NP_001157742.1 RefSeq:NP_002866.2
RefSeq:NP_597994.3 UniGene:Hs.631709 PDB:1B22 PDBsum:1B22
ProteinModelPortal:Q06609 SMR:Q06609 DIP:DIP-462N IntAct:Q06609
MINT:MINT-1374477 STRING:Q06609 PhosphoSite:Q06609 DMDM:548663
PaxDb:Q06609 PRIDE:Q06609 DNASU:5888 Ensembl:ENST00000267868
Ensembl:ENST00000382643 Ensembl:ENST00000423169
Ensembl:ENST00000532743 Ensembl:ENST00000557850 GeneID:5888
KEGG:hsa:5888 UCSC:uc001zmi.4 UCSC:uc010bbw.3 GeneCards:GC15P040987
HGNC:HGNC:9817 HPA:CAB010381 MIM:179617 MIM:614508
neXtProt:NX_Q06609 PharmGKB:PA34176 PhylomeDB:Q06609
BindingDB:Q06609 ChiTaRS:RAD51 EvolutionaryTrace:Q06609
GenomeRNAi:5888 NextBio:22896 PMAP-CutDB:Q06609 ArrayExpress:Q06609
Bgee:Q06609 CleanEx:HS_RAD51 Genevestigator:Q06609
GermOnline:ENSG00000051180 Uniprot:Q06609
Length = 339
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 235/319 (73%), Positives = 284/319 (89%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYARA+NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>UNIPROTKB|B0M1M6 [details] [associations]
symbol:pigRAD51 "Rad51" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051106
"positive regulation of DNA ligation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:CU633257 EMBL:EU302125 EMBL:AB355632
RefSeq:NP_001116653.1 UniGene:Ssc.22664 SMR:B0M1M6 STRING:B0M1M6
Ensembl:ENSSSCT00000005265 GeneID:100141309 KEGG:ssc:100141309
Uniprot:B0M1M6
Length = 339
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 234/319 (73%), Positives = 284/319 (89%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILTEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYARA+NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+I+DSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIIDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>UNIPROTKB|Q2KJ94 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0016605 GO:GO:0051260
GO:GO:0003690 GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:BC105458
IPI:IPI00686332 RefSeq:NP_001039644.1 UniGene:Bt.36197 HSSP:O73948
ProteinModelPortal:Q2KJ94 SMR:Q2KJ94 STRING:Q2KJ94 PRIDE:Q2KJ94
Ensembl:ENSBTAT00000003788 GeneID:514749 KEGG:bta:514749 CTD:5888
InParanoid:Q2KJ94 OrthoDB:EOG47H5QB NextBio:20871491 Uniprot:Q2KJ94
Length = 339
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 234/319 (73%), Positives = 283/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILTEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>UNIPROTKB|Q8MKI8 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006268 "DNA
unwinding involved in replication" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0007126 GO:GO:0048471 GO:GO:0005759
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AB043896 RefSeq:NP_001003043.1
UniGene:Cfa.85 ProteinModelPortal:Q8MKI8 SMR:Q8MKI8 STRING:Q8MKI8
Ensembl:ENSCAFT00000014658 GeneID:403568 KEGG:cfa:403568
InParanoid:Q8MKI8 NextBio:20817076 Uniprot:Q8MKI8
Length = 339
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 234/319 (73%), Positives = 283/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELISIKGISEAKADKILTEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>UNIPROTKB|P70099 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:10029 "Cricetulus griseus" [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0006268 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:Y08202 RefSeq:NP_001233686.1
ProteinModelPortal:P70099 SMR:P70099 GeneID:100689324
Uniprot:P70099
Length = 339
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 234/319 (73%), Positives = 283/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI+A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGISANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+F KPIGGNI+AHASTTRL LRKGRGE RICKV SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFTADPKKPIGGNIIAHASTTRLYLRKGRGETRICKVYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>MGI|MGI:97890 [details] [associations]
symbol:Rad51 "RAD51 homolog" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO;IDA;IMP] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=TAS]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=TAS] [GO:0007126 "meiosis" evidence=IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016605 "PML
body" evidence=ISO] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:97890 GO:GO:0005524 GO:GO:0048471
GO:GO:0005654 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_120463 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 GO:GO:0007131 Reactome:REACT_27235 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13473 EMBL:D13803 EMBL:AK011242
EMBL:AK076468 EMBL:AK151157 EMBL:AK151177 EMBL:BC027384
IPI:IPI00118524 PIR:A48221 RefSeq:NP_035364.1 UniGene:Mm.330492
ProteinModelPortal:Q08297 SMR:Q08297 IntAct:Q08297 MINT:MINT-205669
STRING:Q08297 PhosphoSite:Q08297 PaxDb:Q08297 PRIDE:Q08297
Ensembl:ENSMUST00000028795 GeneID:19361 KEGG:mmu:19361
InParanoid:Q08297 NextBio:296421 Bgee:Q08297 CleanEx:MM_RAD51
Genevestigator:Q08297 GermOnline:ENSMUSG00000027323 Uniprot:Q08297
Length = 339
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 234/319 (73%), Positives = 283/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKILTEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>UNIPROTKB|G1K2Z8 [details] [associations]
symbol:RAD51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006268
"DNA unwinding involved in replication" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:AADN02040043
ProteinModelPortal:G1K2Z8 Ensembl:ENSGALT00000007192 Uniprot:G1K2Z8
Length = 337
Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
Identities = 234/319 (73%), Positives = 282/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVESVA++P+KELL IKGISEAK DKI+ A+K
Sbjct: 19 GPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAK 78
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQLCHTL
Sbjct: 79 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTL 138
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 139 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 198
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MM E+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 199 TQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 258
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 259 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 318
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D K+
Sbjct: 319 PEAEAMFAINADGVGDAKE 337
>UNIPROTKB|P37383 [details] [associations]
symbol:RAD51A "DNA repair protein RAD51 homolog 1"
species:9031 "Gallus gallus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0006268 "DNA unwinding involved in
replication" evidence=ISS] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0007126
GO:GO:0048471 GO:GO:0005654 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0000800 Reactome:REACT_115612
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888 EMBL:L09655
EMBL:S59426 IPI:IPI00593131 PIR:S35642 RefSeq:NP_990504.1
UniGene:Gga.2303 ProteinModelPortal:P37383 SMR:P37383 STRING:P37383
Ensembl:ENSGALT00000032744 GeneID:396086 KEGG:gga:396086
InParanoid:P37383 NextBio:20816144 Uniprot:P37383
Length = 339
Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
Identities = 234/319 (73%), Positives = 282/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVESVA++P+KELL IKGISEAK DKI+ A+K
Sbjct: 21 GPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQLCHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MM E+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D K+
Sbjct: 321 PEAEAMFAINADGVGDAKE 339
>UNIPROTKB|O77507 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9986 "Oryctolagus cuniculus" [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0005759 GO:GO:0003684
GO:GO:0006281 GO:GO:0006310 GO:GO:0003690 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0006268
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AF017729 RefSeq:NP_001075493.1
UniGene:Ocu.2212 ProteinModelPortal:O77507 SMR:O77507 STRING:O77507
GeneID:100008661 Uniprot:O77507
Length = 339
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 233/319 (73%), Positives = 281/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP PV +L+ GI A DVKKL++AG T E+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPVSRLEQCGINANDVKKLEEAGFHTEEAVAYAPKKELINIKGISEAKADKILTEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+G+DVL+NVAYAR +NTDHQ
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQ 200
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +LADEFG
Sbjct: 201 TQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFG 260
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
V VVITNQVVAQVDG+A+FA KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 261 VTVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCL 320
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 321 PEAEAMFAINADGVGDAKD 339
>ZFIN|ZDB-GENE-040426-2286 [details] [associations]
symbol:rad51 "RAD51 homolog (RecA homolog, E.
coli) (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0051597 "response to methylmercury" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382
ZFIN:ZDB-GENE-040426-2286 GO:GO:0005524 GO:GO:0046686 GO:GO:0003684
GO:GO:0006281 GO:GO:0051597 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:BX936455 IPI:IPI00496483
RefSeq:NP_998371.2 UniGene:Dr.1514 SMR:Q5TYR1
Ensembl:ENSDART00000060706 GeneID:406487 KEGG:dre:406487
InParanoid:Q5TYR1 NextBio:20818074 Uniprot:Q5TYR1
Length = 340
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 232/319 (72%), Positives = 281/319 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP PV +L+ SGI++ D+KKL+D G TVE+VAY+P+KELL IKGISEAK DKI+ A+K
Sbjct: 22 GPQPVSRLEQSGISSSDIKKLEDGGFHTVEAVAYAPKKELLNIKGISEAKADKILTEAAK 81
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
+VP+GFT+AT+ H +R EIIQI++GS+ELDK+L+GG+ETGSITE++GEFR+GKTQLCHTL
Sbjct: 82 MVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTL 141
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+DQGGGEGKAMYID EGTFRP+RLL +A+RYGL G+DVL+NVAYARA+NTDHQ
Sbjct: 142 AVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQ 201
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++LL +A++MM E+R+AL+IVDSATALYRTD+SGRGELSARQ HL +FLR L +LADEFG
Sbjct: 202 TQLLYQASAMMTESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFG 261
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAVVITNQVVAQVDG+A+F+ KPIGGNI+AHASTTRL LRKGRGE RICK+ SPCL
Sbjct: 262 VAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCL 321
Query: 324 AEAEARFQISAQGVADVKD 342
EAEA F I+A GV D KD
Sbjct: 322 PEAEAMFAINADGVGDAKD 340
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 219/319 (68%), Positives = 275/319 (86%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P++ L+ +GI A D+KK+ +AG TVES+AY+P+++LL IKGISEAK DK++ ASK
Sbjct: 43 GPMPLQMLEGNGITASDIKKIHEAGYYTVESIAYTPKRQLLLIKGISEAKADKLLGEASK 102
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R E+I IT+GS++LD +L+GGVETGSITE++GEFR+GK+Q+CHTL
Sbjct: 103 LVPMGFTTATEYHIRRSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTL 162
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D GGGEGK +YID EGTFRP RLL +ADRYGLNG +VL+NVAYARAYN DHQ
Sbjct: 163 AVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVADRYGLNGEEVLDNVAYARAYNADHQ 222
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
LL +AA+MM E+RF+L++VDS TALYRTDFSGRGELSARQMHLA+F+R+LQ+LADEFG
Sbjct: 223 LELLQQAANMMSESRFSLLVVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFG 282
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
+AVVITNQVVAQVDG + P+ KPIGGNI+AH+STTRL+LRKGRGE+RICK+ SPCL
Sbjct: 283 IAVVITNQVVAQVDGISFNPDPK-KPIGGNILAHSSTTRLSLRKGRGEQRICKIYDSPCL 341
Query: 324 AEAEARFQISAQGVADVKD 342
E+EA F I++ GV D K+
Sbjct: 342 PESEAIFAINSDGVGDPKE 360
>UNIPROTKB|A3E3X4 [details] [associations]
symbol:rad51 "Rad51" species:4754 "Pneumocystis carinii"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865192 EMBL:DQ865193
ProteinModelPortal:A3E3X4 SMR:A3E3X4 Uniprot:A3E3X4
Length = 343
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 221/320 (69%), Positives = 275/320 (85%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ +GI+A D+KK+ +AG TVE++AY+P++ +L IKGISEAK DK+I ASK
Sbjct: 23 GPTPLSKLEGNGISASDIKKIIEAGYNTVEAIAYTPKRAILLIKGISEAKADKLISEASK 82
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R E+I IT+GS++LD +L GG+ETGSITEI+GEFR+GK+Q+CHTL
Sbjct: 83 LVPMGFTTATEFHQRRCELISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTL 142
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D GGGEGK +YID EGTFRP RLL +ADRYGLNG +VL+NVAYARAYN DHQ
Sbjct: 143 AVTCQLPIDMGGGEGKCLYIDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYNADHQ 202
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
+LL +AA+MM E+RF+L+IVDSAT+LYRTDF+GRGELSARQMHLAKFLR+LQ+LADE+G
Sbjct: 203 LQLLGQAANMMAESRFSLLIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYG 262
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIK-PIGGNIMAHASTTRLALRKGRGEERICKVISSPC 322
+AVVITNQVVAQVDG+A P K PIGGNI+AH+STTRL+LRKGRGE+RICK+ SPC
Sbjct: 263 IAVVITNQVVAQVDGNASMFNPDPKKPIGGNIIAHSSTTRLSLRKGRGEQRICKIYDSPC 322
Query: 323 LAEAEARFQISAQGVADVKD 342
LAEA+A F I+ GV D D
Sbjct: 323 LAEADAVFAITNGGVDDPVD 342
>UNIPROTKB|A3E3X6 [details] [associations]
symbol:rad51 "Rad51" species:263815 "Pneumocystis murina"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865194 EMBL:DQ865195
ProteinModelPortal:A3E3X6 SMR:A3E3X6 Uniprot:A3E3X6
Length = 343
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 221/320 (69%), Positives = 275/320 (85%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ +GI+A D+KK+ +AG TVE++AY+P++ +L IKGISEAK DK+I ASK
Sbjct: 23 GPTPLSKLEGNGISASDIKKIIEAGYNTVEAIAYTPKRAILLIKGISEAKADKLISEASK 82
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R E+I IT+GS++LD +L GG+ETGSITEI+GEFR+GK+Q+CHTL
Sbjct: 83 LVPMGFTTATEFHQRRCELISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTL 142
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D GGGEGK +YID EGTFRP RLL +ADRYGLNG +VL+NVAYARAYN DHQ
Sbjct: 143 AVTCQLPIDMGGGEGKCLYIDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYNADHQ 202
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
+LL +AA+MM E+RF+L+IVDSAT+LYRTDF+GRGELSARQMHLAKFLR+LQ+LADE+G
Sbjct: 203 LQLLGQAANMMAESRFSLLIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYG 262
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIK-PIGGNIMAHASTTRLALRKGRGEERICKVISSPC 322
+AVVITNQVVAQVDG+A P K PIGGNI+AH+STTRL+LRKGRGE+RICK+ SPC
Sbjct: 263 IAVVITNQVVAQVDGNASMFNPDPKKPIGGNIIAHSSTTRLSLRKGRGEQRICKIYDSPC 322
Query: 323 LAEAEARFQISAQGVADVKD 342
LAEA+A F I+ GV D D
Sbjct: 323 LAEADAVFAITNGGVDDPVD 342
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 217/319 (68%), Positives = 273/319 (85%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P++ L +GI D+KK+ +AG TVES+AY+P+++LL IKGISEAK DK++ ASK
Sbjct: 47 GPMPLQLLVGNGITTGDLKKVHEAGYYTVESIAYTPKRQLLNIKGISEAKADKLLSEASK 106
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R E+I IT+GS++LD +L+GGVETGSITE++GEFR+GK+Q+CHTL
Sbjct: 107 LVPMGFTTATEYHIRRSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTL 166
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+D GGGEGK +YID EGTFRP RLL +A+RYGLNG +VL+NVAYARAYN DHQ
Sbjct: 167 AVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQ 226
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
LL +AA+MM E+RF+L++VDS TALYRTDFSGRGELSARQMHLA+F+R+LQ+LADEFG
Sbjct: 227 LELLQQAANMMAESRFSLLVVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFG 286
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
+AVVITNQVVAQVDG + P+ KPIGGNI+AH+STTRL+LRKGRGE+RICKV SPCL
Sbjct: 287 IAVVITNQVVAQVDGISFNPDPK-KPIGGNILAHSSTTRLSLRKGRGEQRICKVYDSPCL 345
Query: 324 AEAEARFQISAQGVADVKD 342
E+EA F I++ G+ D K+
Sbjct: 346 PESEAIFAINSDGIGDPKE 364
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 211/320 (65%), Positives = 259/320 (80%)
Query: 24 GPF-PVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS 82
G F P+E+LQ +GI DVKKL+++GL T E+VAY+PRK+LL+IKGISEAK DK++ A+
Sbjct: 78 GSFVPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAA 137
Query: 83 KLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHT 142
+LVP+GF +A H +R E+I +T+GS+ LD +L GGVETGSITE++GEFR+GK+QLCHT
Sbjct: 138 RLVPMGFVTAADFHMRRSELICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHT 197
Query: 143 LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDH 202
L VTCQ+PLD GGGEGK +YID EGTFRP RL+ IA R+GL+ D L NVAYARAYN DH
Sbjct: 198 LAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADH 257
Query: 203 QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
Q RLL AA MM E+RF+L++VDS ALYRTDFSGRGELSARQMHLAKF+R+LQ+LAD+F
Sbjct: 258 QLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQF 317
Query: 263 GVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPC 322
GVAVV+TNQVVAQVDG F KPIGGNIMAH+STTRL +KG+G +R+CKV+ SPC
Sbjct: 318 GVAVVVTNQVVAQVDGGMAFNPDPKKPIGGNIMAHSSTTRLGFKKGKGCQRLCKVVDSPC 377
Query: 323 LAEAEARFQISAQGVADVKD 342
L EAE F I GV D ++
Sbjct: 378 LPEAECVFAIYEDGVGDPRE 397
>ASPGD|ASPL0000057020 [details] [associations]
symbol:uvsC species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006312 "mitotic recombination" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0030998 "linear element" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0000150 "recombinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProteinModelPortal:C8VSQ3
SMR:C8VSQ3 EnsemblFungi:CADANIAT00001386 Uniprot:C8VSQ3
Length = 348
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 208/318 (65%), Positives = 262/318 (82%)
Query: 25 PFPVEQLQA-SGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
P P+ L+ +G+ + D+K DAG TVES+AY+P++ L QIKGISE K KI+ A+K
Sbjct: 22 PTPLSSLEGMAGLTSRDIKLFVDAGYHTVESIAYTPKRLLEQIKGISEQKATKILVEAAK 81
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT++HA+R E+I IT+GS++LD +L GG+ETGSITEI+GEFR+GK+Q+CHTL
Sbjct: 82 LVPMGFTTATEMHARRSELISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTL 141
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP D GGGEGK +YID EGTFRP RLL +A RYGL G +VL+NVAYARAYN+DHQ
Sbjct: 142 AVTCQLPFDMGGGEGKCLYIDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQ 201
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
+LL +A+ MM ETRF+L++VDSAT+LYRTDF+GRGELS RQ HLAKF+R+LQ+LADEFG
Sbjct: 202 LQLLNQASQMMCETRFSLLVVDSATSLYRTDFNGRGELSTRQTHLAKFMRTLQRLADEFG 261
Query: 264 VAVVITNQVVAQVDG--SAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSP 321
+AVVITNQVVAQVDG SA+F KPIGGNI+AHASTTRL+L+KGRGE R+CK+ SP
Sbjct: 262 IAVVITNQVVAQVDGGPSAMFNPDPKKPIGGNIIAHASTTRLSLKKGRGETRVCKIYDSP 321
Query: 322 CLAEAEARFQISAQGVAD 339
CL E++ F I+ G+ D
Sbjct: 322 CLPESDCLFAINEDGIGD 339
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 206/320 (64%), Positives = 259/320 (80%)
Query: 23 HGPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS 82
+GP +EQL+ +GI A D+KKLK G T+ES+AY+P++ L+ +KGISE K +KI A+
Sbjct: 37 NGPLLIEQLEGNGINASDIKKLKAEGFHTIESIAYTPKRHLMTVKGISENKAEKISAEAA 96
Query: 83 KLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHT 142
KLVPLGFT+A++ H++R E+I +T+GS++LD +L GGVETGSITE++GEFR+GK+QLCHT
Sbjct: 97 KLVPLGFTTASEFHSRRSELICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHT 156
Query: 143 LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDH 202
L VTCQLP+D GGGEGK +YID EGTFRP RL+ IA RYGLN D L+NVAYARAYN +H
Sbjct: 157 LAVTCQLPIDMGGGEGKCLYIDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEH 216
Query: 203 QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
Q LL AA MM E+RF+L+IVDS +LYRTD++GRGELSARQ H+AKF+R+LQ+LADEF
Sbjct: 217 QLNLLNIAAEMMAESRFSLLIVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEF 276
Query: 263 GVAVVITNQVVAQVDG-SAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSP 321
G+AVVITNQVVAQVDG S +F KPIGGNI+AH+STTRL+ +KGRGE RICK+ SP
Sbjct: 277 GIAVVITNQVVAQVDGMSGMFNPDPKKPIGGNIIAHSSTTRLSFKKGRGETRICKIYDSP 336
Query: 322 CLAEAEARFQISAQGVADVK 341
CL E+E F I G+ D K
Sbjct: 337 CLPESECIFAIYEDGIGDPK 356
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 206/320 (64%), Positives = 259/320 (80%)
Query: 23 HGPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS 82
+GP +EQL+ +GI A D+KKLK G T+ES+AY+P++ L+ +KGISE K +KI A+
Sbjct: 37 NGPLLIEQLEGNGINASDIKKLKAEGFHTIESIAYTPKRHLMTVKGISENKAEKISAEAA 96
Query: 83 KLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHT 142
KLVPLGFT+A++ H++R E+I +T+GS++LD +L GGVETGSITE++GEFR+GK+QLCHT
Sbjct: 97 KLVPLGFTTASEFHSRRSELICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHT 156
Query: 143 LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDH 202
L VTCQLP+D GGGEGK +YID EGTFRP RL+ IA RYGLN D L+NVAYARAYN +H
Sbjct: 157 LAVTCQLPIDMGGGEGKCLYIDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEH 216
Query: 203 QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
Q LL AA MM E+RF+L+IVDS +LYRTD++GRGELSARQ H+AKF+R+LQ+LADEF
Sbjct: 217 QLNLLNIAAEMMAESRFSLLIVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEF 276
Query: 263 GVAVVITNQVVAQVDG-SAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSP 321
G+AVVITNQVVAQVDG S +F KPIGGNI+AH+STTRL+ +KGRGE RICK+ SP
Sbjct: 277 GIAVVITNQVVAQVDGMSGMFNPDPKKPIGGNIIAHSSTTRLSFKKGRGETRICKIYDSP 336
Query: 322 CLAEAEARFQISAQGVADVK 341
CL E+E F I G+ D K
Sbjct: 337 CLPESECIFAIYEDGIGDPK 356
>DICTYBASE|DDB_G0273611 [details] [associations]
symbol:rad51-2 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 202/316 (63%), Positives = 260/316 (82%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+ +L+ +GI A D+KKL++ GL TV++VA++ +K L IKGISE K DK++ A KLV +
Sbjct: 35 INKLEGNGINAADLKKLQEQGLNTVQAVAFTTKKTLTGIKGISEQKADKLLAEAKKLVFM 94
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +AT ++ R EIIQIT+GS+E D +L+GG+E+GSITEI+GEFR+GKTQ+CHTLCVTC
Sbjct: 95 GFRTATDINKARAEIIQITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTC 154
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QL QGGGEG+A+YID EGTFRP+RLL IA+RY LNG VL+NV+YARAYN+DHQ LL
Sbjct: 155 QLGYSQGGGEGRALYIDTEGTFRPERLLAIAERYNLNGEHVLDNVSYARAYNSDHQLELL 214
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
++A++MM E+R+AL+IVDSATALYRTD++GRGEL+ RQ HLA+FLR+LQ+LADEFGVAVV
Sbjct: 215 VQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQKHLARFLRTLQRLADEFGVAVV 274
Query: 268 ITNQVVAQVDGSAIFAGPQIK-PIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
ITNQVVA VDG+ P K PIGG+IMAH+STTRL+LRKG+GE RICK+ SP L E+
Sbjct: 275 ITNQVVASVDGAGGMFNPDPKKPIGGHIMAHSSTTRLSLRKGKGEMRICKIYDSPSLPES 334
Query: 327 EARFQISAQGVADVKD 342
E F I + G++D K+
Sbjct: 335 EKPFGIYSDGISDYKE 350
>DICTYBASE|DDB_G0273139 [details] [associations]
symbol:rad51-1 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 202/316 (63%), Positives = 260/316 (82%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+ +L+ +GI A D+KKL++ GL TV++VA++ +K L IKGISE K DK++ A KLV +
Sbjct: 35 INKLEGNGINAADLKKLQEQGLNTVQAVAFTTKKTLTGIKGISEQKADKLLAEAKKLVFM 94
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +AT ++ R EIIQIT+GS+E D +L+GG+E+GSITEI+GEFR+GKTQ+CHTLCVTC
Sbjct: 95 GFRTATDINKARAEIIQITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTC 154
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QL QGGGEG+A+YID EGTFRP+RLL IA+RY LNG VL+NV+YARAYN+DHQ LL
Sbjct: 155 QLGYSQGGGEGRALYIDTEGTFRPERLLAIAERYNLNGEHVLDNVSYARAYNSDHQLELL 214
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
++A++MM E+R+AL+IVDSATALYRTD++GRGEL+ RQ HLA+FLR+LQ+LADEFGVAVV
Sbjct: 215 VQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQKHLARFLRTLQRLADEFGVAVV 274
Query: 268 ITNQVVAQVDGSAIFAGPQIK-PIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
ITNQVVA VDG+ P K PIGG+IMAH+STTRL+LRKG+GE RICK+ SP L E+
Sbjct: 275 ITNQVVASVDGAGGMFNPDPKKPIGGHIMAHSSTTRLSLRKGKGEMRICKIYDSPSLPES 334
Query: 327 EARFQISAQGVADVKD 342
E F I + G++D K+
Sbjct: 335 EKPFGIYSDGISDYKE 350
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 185/319 (57%), Positives = 245/319 (76%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP +EQL A G D++ LK+ GL TVE VAY+P + L IKGISE K +K+ +A +
Sbjct: 31 GPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAPMRTLCAIKGISEQKAEKLKKACKE 90
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
L GF +A H R +I+ T+GS++LD +L+GG+ETG ITE++GEFR+GK+QLCHTL
Sbjct: 91 LCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTL 150
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
+TCQLP++Q GGEGK ++ID EGTFRP+R++ IA RYGL+ D L N+AYA+AYN DHQ
Sbjct: 151 AITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQ 210
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
+ LL++A++MM + RFAL+IVDSATALYR+++ GRGEL+ RQ HL +FLR LQ++AD +G
Sbjct: 211 TELLIDASAMMADARFALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYG 270
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAV+ITNQVVA+VD ++F G + PIGGNI+AHAS TRL LRKGRGE RICK+ SP L
Sbjct: 271 VAVIITNQVVAKVDAMSMFGGHEKIPIGGNIIAHASQTRLYLRKGRGESRICKIYDSPVL 330
Query: 324 AEAEARFQISAQGVADVKD 342
E EA F I+ G+AD ++
Sbjct: 331 PEGEAVFAITEGGIADYEE 349
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 185/319 (57%), Positives = 245/319 (76%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP +EQL A G D++ LK+ GL TVE VAY+P + L IKGISE K +K+ +A +
Sbjct: 31 GPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAPMRTLCAIKGISEQKAEKLKKACKE 90
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
L GF +A H R +I+ T+GS++LD +L+GG+ETG ITE++GEFR+GK+QLCHTL
Sbjct: 91 LCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTL 150
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
+TCQLP++Q GGEGK ++ID EGTFRP+R++ IA RYGL+ D L N+AYA+AYN DHQ
Sbjct: 151 AITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQ 210
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
+ LL++A++MM + RFAL+IVDSATALYR+++ GRGEL+ RQ HL +FLR LQ++AD +G
Sbjct: 211 TELLIDASAMMADARFALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYG 270
Query: 264 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
VAV+ITNQVVA+VD ++F G + PIGGNI+AHAS TRL LRKGRGE RICK+ SP L
Sbjct: 271 VAVIITNQVVAKVDAMSMFGGHEKIPIGGNIIAHASQTRLYLRKGRGESRICKIYDSPVL 330
Query: 324 AEAEARFQISAQGVADVKD 342
E EA F I+ G+AD ++
Sbjct: 331 PEGEAVFAITEGGIADYEE 349
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 193/320 (60%), Positives = 245/320 (76%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP V +L I A D+K L+ A L TVESVA + +K+L+ I G+ KV++II A+K
Sbjct: 18 GPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQIITEANK 77
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVPLGF SA + R +++Q+++GS+ELDK+L GG+ETGSITEI+GEFR GKTQLCHTL
Sbjct: 78 LVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTL 137
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQ 203
VTCQLP+ Q GGEGK MYID E TFRP+RL IA RY LN ++VL+NVA+ RA+N+D Q
Sbjct: 138 AVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQ 197
Query: 204 SRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
++L+ AA M+ E+R+AL+IVDSA ALYR+D+ GRGEL+ARQ HL FLR LQ+LADEFG
Sbjct: 198 TKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFG 257
Query: 264 VAVVITNQVVAQVDGS-AIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPC 322
VAVVITNQV A +DG+ +F KPIGG+IMAH+STTRL LRKG+GE RICK+ SPC
Sbjct: 258 VAVVITNQVTASLDGAPGMFDAK--KPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPC 315
Query: 323 LAEAEARFQISAQGVADVKD 342
L E+EA F I G+ D ++
Sbjct: 316 LPESEAMFAILPDGIGDARE 335
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 175/316 (55%), Positives = 247/316 (78%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+++L++SGI++ D+ KLK+AG T ES+A++ R+EL +KGIS+ K +KI++ A K V +
Sbjct: 79 IDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQM 138
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GFT+ ++H +R +++QI +GS LD++L GG+ETGSITE+YGE+R+GKTQLCH+L V C
Sbjct: 139 GFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLC 198
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP+D GGGEGK MYID TFRP+R++ IA RY ++ A VLEN+A ARAYN++H L+
Sbjct: 199 QLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALI 258
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
+ A +MM E+R+A++IVD ATA +R +++GRG+L+ RQM L+ FL+ L KLADE+GVAV+
Sbjct: 259 IRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVI 318
Query: 268 ITNQVVAQVDGSA-IFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
ITNQVVAQVDG A +F KPIGG+I+AH STTRL LRKG+GE R+ K++ SP L EA
Sbjct: 319 ITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEA 378
Query: 327 EARFQISAQGVADVKD 342
EA + I+ G+ D ++
Sbjct: 379 EATYSITNHGIEDARE 394
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 175/316 (55%), Positives = 247/316 (78%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+++L++SGI++ D+ KLK+AG T ES+A++ R+EL +KGIS+ K +KI++ A K V +
Sbjct: 41 IDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQM 100
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GFT+ ++H +R +++QI +GS LD++L GG+ETGSITE+YGE+R+GKTQLCH+L V C
Sbjct: 101 GFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLC 160
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP+D GGGEGK MYID TFRP+R++ IA RY ++ A VLEN+A ARAYN++H L+
Sbjct: 161 QLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALI 220
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
+ A +MM E+R+A++IVD ATA +R +++GRG+L+ RQM L+ FL+ L KLADE+GVAV+
Sbjct: 221 IRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVI 280
Query: 268 ITNQVVAQVDGSA-IFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
ITNQVVAQVDG A +F KPIGG+I+AH STTRL LRKG+GE R+ K++ SP L EA
Sbjct: 281 ITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEA 340
Query: 327 EARFQISAQGVADVKD 342
EA + I+ G+ D ++
Sbjct: 341 EATYSITNHGIEDARE 356
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 175/316 (55%), Positives = 247/316 (78%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+++L++SGI++ D+ KLK+AG T ES+A++ R+EL +KGIS+ K +KI++ A K V +
Sbjct: 79 IDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQM 138
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GFT+ ++H +R +++QI +GS LD++L GG+ETGSITE+YGE+R+GKTQLCH+L V C
Sbjct: 139 GFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLC 198
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP+D GGGEGK MYID TFRP+R++ IA RY ++ A VLEN+A ARAYN++H L+
Sbjct: 199 QLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALI 258
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
+ A +MM E+R+A++IVD ATA +R +++GRG+L+ RQM L+ FL+ L KLADE+GVAV+
Sbjct: 259 IRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVI 318
Query: 268 ITNQVVAQVDGSA-IFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
ITNQVVAQVDG A +F KPIGG+I+AH STTRL LRKG+GE R+ K++ SP L EA
Sbjct: 319 ITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEA 378
Query: 327 EARFQISAQGVADVKD 342
EA + I+ G+ D ++
Sbjct: 379 EATYSITNHGIEDARE 394
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 167/315 (53%), Positives = 223/315 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+++L A GI A DVKKL++AG+ T + +K L IKG+SEAKVDKI EAA K+V
Sbjct: 31 IDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNF 90
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
G+ + + +R +++IT+G + LD +L GG+ET +ITE +GEFRSGKTQL HTLCVT
Sbjct: 91 GYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTT 150
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP + GG GK YID EGTFRP R++ IA+R+G++ VL+N+ YARAY +HQ LL
Sbjct: 151 QLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLL 210
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
L A+ M E F ++IVDS AL+R DF+GRGEL+ RQ LA+ L L K+A+EF VAV
Sbjct: 211 LGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVY 270
Query: 268 ITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEAE 327
+TNQV+A G + P+ KP GG+++AHA+T RL RKG+G+ R+CKV +P LAEAE
Sbjct: 271 MTNQVIADPGGGMFISDPK-KPAGGHVLAHAATIRLLFRKGKGDTRVCKVYDAPNLAEAE 329
Query: 328 ARFQISAQGVADVKD 342
A FQI+ G+AD KD
Sbjct: 330 ASFQITQGGIADAKD 344
>UNIPROTKB|Q50LF6 [details] [associations]
symbol:tilDmc1 "RecA homolog Dmc1" species:8128
"Oreochromis niloticus" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504 GO:GO:0000150
EMBL:AERX01002235 EMBL:AB182646 RefSeq:XP_003438754.1
UniGene:Oni.44877 SMR:Q50LF6 Ensembl:ENSONIT00000024880
GeneID:100534532 Uniprot:Q50LF6
Length = 342
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 169/317 (53%), Positives = 220/317 (69%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CTV+ + + RK L IKG+SEAKV+KI EAA K++ +
Sbjct: 26 IDLLQKHGINMADIKKLKSVGICTVKGIQMTTRKALCNIKGLSEAKVEKIKEAAGKMLNV 85
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + A+R ++ +T+GS+E DK+L GGVE+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 86 GFQTAFEYSARRKQVFHVTTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTA 145
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP + G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 146 QLPGEDGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELL 205
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 206 DFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 265
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V ITNQ+ A F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 266 VFITNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRGEMRIAKIFDSPDMPE 325
Query: 326 AEARFQISAQGVADVKD 342
EA F ISA GV D KD
Sbjct: 326 NEATFAISAGGVTDAKD 342
>GENEDB_PFALCIPARUM|MAL8P1.76 [details] [associations]
symbol:MAL8P1.76 "meiotic recombination protein
dmc1-like protein" species:5833 "Plasmodium falciparum" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 159/316 (50%), Positives = 224/316 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+E+LQ GI A D+ KLK +G CT+ S+ + +KEL +KGISEAKVDKI+E ASK+
Sbjct: 32 IEKLQDLGINAADINKLKGSGYCTILSLIQTTKKELCNVKGISEAKVDKILEVASKIENC 91
Query: 88 G-FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVT 146
F +A +L +R ++++IT+GS D+ L GG+E+ ITE++GE R GKTQ+CHTL VT
Sbjct: 92 SSFITANELVQKRSKVLKITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVT 151
Query: 147 CQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRL 206
QLP GG GK YID EGTFRP+++ +IA+RYGL+G VL+N+ YARA+ +H +L
Sbjct: 152 AQLPKSLNGGNGKVCYIDTEGTFRPEKVCKIAERYGLDGEAVLDNILYARAFTHEHLYQL 211
Query: 207 LLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
L +A+ M E FAL++VDS +L+R DFSGRGELS RQ L K + L KL+++F +A+
Sbjct: 212 LAISAAKMCEEPFALLVVDSIISLFRVDFSGRGELSERQQKLNKTMSILSKLSEQFNIAI 271
Query: 267 VITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
+ITNQV++ + F +KP+GG+++ HAST RL+LRKG+G++R+CKV +P L E
Sbjct: 272 LITNQVMSDPGATMTFIANPMKPVGGHVIGHASTIRLSLRKGKGDQRVCKVYDAPNLPEV 331
Query: 327 EARFQISAQGVADVKD 342
E FQ+S +GV D D
Sbjct: 332 ECIFQLSDKGVIDATD 347
>UNIPROTKB|Q8IB05 [details] [associations]
symbol:MAL8P1.76 "Meiotic recombination protein dmc1-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 159/316 (50%), Positives = 224/316 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+E+LQ GI A D+ KLK +G CT+ S+ + +KEL +KGISEAKVDKI+E ASK+
Sbjct: 32 IEKLQDLGINAADINKLKGSGYCTILSLIQTTKKELCNVKGISEAKVDKILEVASKIENC 91
Query: 88 G-FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVT 146
F +A +L +R ++++IT+GS D+ L GG+E+ ITE++GE R GKTQ+CHTL VT
Sbjct: 92 SSFITANELVQKRSKVLKITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVT 151
Query: 147 CQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRL 206
QLP GG GK YID EGTFRP+++ +IA+RYGL+G VL+N+ YARA+ +H +L
Sbjct: 152 AQLPKSLNGGNGKVCYIDTEGTFRPEKVCKIAERYGLDGEAVLDNILYARAFTHEHLYQL 211
Query: 207 LLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
L +A+ M E FAL++VDS +L+R DFSGRGELS RQ L K + L KL+++F +A+
Sbjct: 212 LAISAAKMCEEPFALLVVDSIISLFRVDFSGRGELSERQQKLNKTMSILSKLSEQFNIAI 271
Query: 267 VITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
+ITNQV++ + F +KP+GG+++ HAST RL+LRKG+G++R+CKV +P L E
Sbjct: 272 LITNQVMSDPGATMTFIANPMKPVGGHVIGHASTIRLSLRKGKGDQRVCKVYDAPNLPEV 331
Query: 327 EARFQISAQGVADVKD 342
E FQ+S +GV D D
Sbjct: 332 ECIFQLSDKGVIDATD 347
>ZFIN|ZDB-GENE-060331-93 [details] [associations]
symbol:dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
ZFIN:ZDB-GENE-060331-93 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:AB182999 IPI:IPI00832294 RefSeq:NP_001018618.1
UniGene:Dr.92382 ProteinModelPortal:Q50LF4 SMR:Q50LF4 STRING:Q50LF4
GeneID:553953 KEGG:dre:553953 InParanoid:Q50LF4 NextBio:20880545
Uniprot:Q50LF4
Length = 342
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 167/317 (52%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+E LQ GI D+KKLK G+CTV+ + + R+ L IKG+SEAKVDKI EAA KL+
Sbjct: 26 IELLQKHGINVADIKKLKSVGICTVKGIQMTTRRALCNIKGLSEAKVDKIKEAAGKLLTC 85
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A++ +R ++ IT+GS E DK+L GGVE+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 86 GFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTA 145
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP + G GK ++ID E TFRP+RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 146 QLPGEYGYTGGKVIFIDTENTFRPERLKDIADRFNVDHEAVLDNVLYARAYTSEHQMELL 205
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 206 DFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 265
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A F KPIGG+I+AHASTTR++LRKGR E RI K+ SP + E
Sbjct: 266 VFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRAELRIAKIFDSPHMPE 325
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+ D KD
Sbjct: 326 NEATFAITAGGITDAKD 342
>UNIPROTKB|Q50LF7 [details] [associations]
symbol:eDmc1 "RecA homolog DMC1" species:7937 "Anguilla
japonica" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 EMBL:AB182645 EMBL:AB201845
ProteinModelPortal:Q50LF7 SMR:Q50LF7 Uniprot:Q50LF7
Length = 339
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 164/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CTV+ + + R+ L +KG+SEAKVDKI EAA KL+
Sbjct: 23 IDLLQKHGINMADIKKLKSIGICTVKGIQMTTRRALCNVKGLSEAKVDKIKEAAGKLLSN 82
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R ++ IT+GS E DK++ GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 83 GFLTAFEYSERRKQVFHITTGSLEFDKLIGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 142
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP + G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 143 QLPGEDGYTGGKVIFIDTENTFRPDRLKDIADRFSVDQEAVLDNVLYARAYTSEHQMELL 202
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 203 DFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 262
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 263 VFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRGEMRIAKIFDSPDMPE 322
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+AD K+
Sbjct: 323 NEATFAITAGGIADAKE 339
>UNIPROTKB|Q9DGC3 [details] [associations]
symbol:Dmc1 "DMC1" species:8330 "Cynops pyrrhogaster"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 HSSP:Q06609 EMBL:AB041944
ProteinModelPortal:Q9DGC3 SMR:Q9DGC3 Uniprot:Q9DGC3
Length = 342
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 163/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CTV+ + + +K L IKG+SEAKVDKI EA +KL+
Sbjct: 26 IDMLQKHGINVADIKKLKSVGICTVKGIQMTTKKALCNIKGLSEAKVDKIKEAVNKLIEP 85
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 86 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITETFGEFRTGKTQLSHTLCVTA 145
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 146 QLPGTDGYTGGKVIFIDTENTFRPDRLRDIADRFSVDHDAVLDNVLYARAYTSEHQMELL 205
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+++DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 206 DYVAAKFHEEAGIFKLLVIDSIMALFRVDFSGRGELAERQQKLAQMLARLQKISEEYNVA 265
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 266 VFVTNQMTADPGAAMSFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPDMPE 325
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G++D K+
Sbjct: 326 NEATFAITAGGISDAKE 342
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 163/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKV+KI EAA+KL+
Sbjct: 24 IDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVEKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A Q +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 84 GFLTAFQYSERRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 143
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 144 QLPGTGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQMELL 203
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 204 DYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 263
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 264 VFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPE 323
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+ D K+
Sbjct: 324 NEATFAITAGGIGDAKE 340
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 163/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 143
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 144 QLPGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELL 203
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 204 DYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 263
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 264 VFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRVSLRKGRGELRIAKIYDSPEMPE 323
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+ D K+
Sbjct: 324 NEATFAITAGGIGDAKE 340
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 162/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 143
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 144 QLPGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELL 203
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 204 DYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 263
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KP+GG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 264 VFVTNQMTADPGATMTFQADPKKPVGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPE 323
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+ D K+
Sbjct: 324 NEATFAITAGGIGDAKE 340
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 163/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 143
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP GG G ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 144 QLP-GAGGYSGGIIFIDTENTFRPDRLRDIADRFNVDHNAVLDNVLYARAYTSEHQMELL 202
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 203 DYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 262
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 263 VFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPE 322
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+ D K+
Sbjct: 323 NEATFAITAGGIGDAKE 339
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 163/317 (51%), Positives = 218/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 143
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 144 QLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELL 203
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 204 DYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 263
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 264 VFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPE 323
Query: 326 AEARFQISAQGVADVKD 342
EA F I+A G+ D K+
Sbjct: 324 NEATFAITAGGIGDAKE 340
>RGD|1307611 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:10116
"Rattus norvegicus" [GO:0000239 "pachytene" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA;ISO]
[GO:0001541 "ovarian follicle development" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007276 "gamete generation" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 RGD:1307611 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006281 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141
GO:GO:0000239 EMBL:CH473950 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 OrthoDB:EOG4F7NKC
GeneTree:ENSGT00550000075091 IPI:IPI00366298 RefSeq:NP_001124039.1
UniGene:Rn.45495 Ensembl:ENSRNOT00000018526 GeneID:362960
KEGG:rno:362960 UCSC:RGD:1307611 NextBio:681931 Uniprot:D3ZJ85
Length = 340
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 163/317 (51%), Positives = 217/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKV+KI EAA+KL+
Sbjct: 24 IDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVEKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A Q +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 84 GFLTAFQYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 143
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 144 QLPGADGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELL 203
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+IVDS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 204 DYVAAKFHEEAGIFKLLIVDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 263
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 264 VFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPE 323
Query: 326 AEARFQISAQGVADVKD 342
EA F I+ G+ D K+
Sbjct: 324 NEATFAITTGGIGDAKE 340
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 158/314 (50%), Positives = 217/314 (69%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+E L A GI D+ KLK AG+CTV+ V S ++ LL+IKG SEAKVDK+ EAASK+ P
Sbjct: 18 IEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRFLLKIKGFSEAKVDKLKEAASKMCPA 77
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
F++A ++ R ++ I++GS L+ IL GG+++ SITE++GEFR GKTQ+ HTLCVT
Sbjct: 78 NFSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTA 137
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP D GG EGK +ID EGTFRP R+ IA+R+G++ +EN+ +RAYN++ Q +
Sbjct: 138 QLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYI 197
Query: 208 LEAASMMVET-RFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
+ ++ E ++ L+IVDS AL+R D+SGRGELS RQ L L L +++EF VAV
Sbjct: 198 TKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAV 257
Query: 267 VITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
+TNQV A + +FA KP+GG++MAHAS TRL LRKGRGEER+ K+ SP + EA
Sbjct: 258 FVTNQVQADPGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEA 317
Query: 327 EARFQISAQGVADV 340
E + I+ G+ADV
Sbjct: 318 ECSYVITPGGIADV 331
>UNIPROTKB|F1NI95 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0000794 GO:GO:0000781 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:AADN02006146 IPI:IPI00578251 Ensembl:ENSGALT00000019979
Uniprot:F1NI95
Length = 346
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 161/316 (50%), Positives = 216/316 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ V + R+ L +KG+SE KVDKI EAA+KL+
Sbjct: 30 IDLLQKHGINVADIKKLKSVGICTIKGVQMTTRRALCNVKGLSEVKVDKIKEAANKLIEP 89
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLCVT
Sbjct: 90 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 149
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP +G GK ++ID E TFRP RL IADR+ ++ VL+NV YARAY ++HQ LL
Sbjct: 150 QLPGPKGYTGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELL 209
Query: 208 LEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+++E+ VA
Sbjct: 210 DYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVA 269
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V +TNQ+ A + F KP+GG+I+AHASTTR++LRKGRGE RI K+ SP + E
Sbjct: 270 VFVTNQMTADPGATMTFQADPKKPVGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPE 329
Query: 326 AEARFQISAQGVADVK 341
EA F I+ G+ D K
Sbjct: 330 NEATFAITPGGIGDAK 345
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 157/313 (50%), Positives = 218/313 (69%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
+++LQ GI A D++KLK +G+ TV +V + R+ L++IKG+SE KV+KI EAA+KLV +
Sbjct: 19 IDELQNYGINASDIQKLKGSGIYTVNTVQSTTRRNLVKIKGLSEVKVEKIKEAANKLVKV 78
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF AT R ++I I++GS++LD +L GG+ T SITE++GEFR GKTQ+ HTLCVT
Sbjct: 79 GFVPATVQMDLRQKVISISTGSKQLDSVLGGGIMTMSITEVFGEFRCGKTQMSHTLCVTA 138
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP GGGEGK +ID EGTFRP+R+ QIA+RY L+ LEN+ YARA N++HQ L+
Sbjct: 139 QLPKSMGGGEGKVAFIDTEGTFRPERIKQIAERYDLDPDSCLENITYARALNSEHQMELV 198
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
+ + + L+IVDS A +R D+ GRGEL+ RQ L + L L +LA+EF +AV
Sbjct: 199 EQLGEELSSGSYTLIIVDSIMANFRVDYCGRGELNERQQKLNQHLFKLNRLAEEFNLAVF 258
Query: 268 ITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
+TNQV + SA+FA KP+GG+++AHAS TR+ LRKGRG+ER+ K+ SP + E
Sbjct: 259 MTNQVQSDPGASALFASADGRKPVGGHVLAHASATRILLRKGRGDERVAKLQDSPDMPER 318
Query: 327 EARFQISAQGVAD 339
E + I G+AD
Sbjct: 319 ECVYVIGEGGIAD 331
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 156/315 (49%), Positives = 221/315 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
V++LQ GI D+ KLK A + TV V + R++LL+IKG+SEAKV+KI EAA K++
Sbjct: 33 VDELQQHGINVQDIVKLKSAAIHTVSGVNMTTRRQLLKIKGMSEAKVEKIKEAAHKILGS 92
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
F + ++ +R + I++GS+ +D IL GG+ + S++E+YGEFR+GKTQL HT+ V
Sbjct: 93 SFATGIEIQEKRKRVNTISTGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQLAHTMSVVA 152
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP D GG GK YID EGTFRP R+ IA+R+G++G+ LEN+ YARA+N++HQ L+
Sbjct: 153 QLPPDLGGASGKVAYIDTEGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELI 212
Query: 208 LEAASMMVETR-FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
E + E + F L+IVDS AL+R D+SGRGELS RQ LA+ L L KL++E+ +AV
Sbjct: 213 NECSMRFAEDKDFRLLIVDSIMALFRVDYSGRGELSERQQKLAQMLSRLTKLSEEYNIAV 272
Query: 267 VITNQVVAQVDGSAIF-AGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
++TNQV + + F AG +KPIGG+I++HAS+TRL LRKGR EER+ K++ SP E
Sbjct: 273 LLTNQVQSDPGATMTFVAGGALKPIGGHILSHASSTRLFLRKGRAEERVAKLVDSPDRPE 332
Query: 326 AEARFQISAQGVADV 340
+EA +++ G ADV
Sbjct: 333 SEASYKLDEGGWADV 347
>UNIPROTKB|Q74ZU7 [details] [associations]
symbol:AGR101C "AGR101Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0006281 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:AE016820 GenomeReviews:AE016820_GR
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 GO:GO:0000709 RefSeq:NP_986767.1 HSSP:Q06609
ProteinModelPortal:Q74ZU7 STRING:Q74ZU7 EnsemblFungi:AAS54591
GeneID:4623069 KEGG:ago:AGOS_AGR101C PhylomeDB:Q74ZU7
Uniprot:Q74ZU7
Length = 333
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 159/317 (50%), Positives = 219/317 (69%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
V++LQ GI A D++KLK +G+ +V +V + R+ LL+IKG SE KV+K+ EAA K++ +
Sbjct: 18 VDELQNYGINASDLQKLKASGIFSVNTVLSTTRRNLLKIKGFSEVKVEKVKEAAGKIIQV 77
Query: 88 GFTSAT-QLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVT 146
GF AT QL ++ + I++GS++LD IL GGV T SITE++GEFR GKTQ+ HTLCVT
Sbjct: 78 GFIPATVQLDIRK-RVFAISTGSKQLDSILGGGVMTMSITEVFGEFRCGKTQMSHTLCVT 136
Query: 147 CQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRL 206
QLP + GGGEGK YID EGTFRP+R+ QIA RY L+ LENV+YARA N++HQ L
Sbjct: 137 AQLPREMGGGEGKVAYIDTEGTFRPERIKQIAARYDLDPDACLENVSYARALNSEHQMEL 196
Query: 207 LLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
+ + + + L+IVDS A +R D+ GRGEL+ RQ L + L L ++A+E+ VAV
Sbjct: 197 VEQLGQELASGDYRLLIVDSIMANFRVDYCGRGELNERQQKLNQHLSRLNRVAEEYNVAV 256
Query: 267 VITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
+TNQV + SA+FA KP+GG+++AHAS TR+ LRKGRGEER+ K+ SP + E
Sbjct: 257 FMTNQVQSDPGASALFASADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPDMPE 316
Query: 326 AEARFQISAQGVADVKD 342
E + I +G+ D D
Sbjct: 317 KECVYVIGEKGITDADD 333
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 155/313 (49%), Positives = 213/313 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
V++LQ GI A D+ KLK AG+C++ SV + R+ + +IKG+SE KV+KI EAA KL+
Sbjct: 16 VDELQNHGINAGDITKLKAAGVCSIASVLSTTRRNMCKIKGLSEVKVEKIKEAAGKLMHS 75
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF AT R +++GS++LD +L GGV + SITE++GEFR GKTQLCHTLCVT
Sbjct: 76 GFIPATVQAELRSRAFTLSTGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVTA 135
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP + GG EGK YID EGTFRP R+ IA+R+ ++ LEN++YARA N++HQ L
Sbjct: 136 QLPKEMGGSEGKVAYIDTEGTFRPDRIRSIAERFQVDADACLENISYARALNSEHQMELA 195
Query: 208 LEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 267
+ + + L++VDS A +R D+SGRGEL+ RQ L + L SL +LA+++ VAV
Sbjct: 196 EQLGLQFADGTYRLLVVDSIMACFRVDYSGRGELNDRQQKLNQHLSSLIRLAEDYNVAVF 255
Query: 268 ITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEA 326
+TNQV + S++FA KP+GG+I+AHAS TR+ LRKGRGEER+ K+ SP +AE
Sbjct: 256 LTNQVQSDPGASSLFAAADGRKPVGGHILAHASATRILLRKGRGEERVAKLQDSPDMAEK 315
Query: 327 EARFQISAQGVAD 339
E + I G+ D
Sbjct: 316 ECVYVIGEGGIKD 328
>SGD|S000000981 [details] [associations]
symbol:DMC1 "Meiosis-specific protein required for repair of
double-strand breaks" species:4932 "Saccharomyces cerevisiae"
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0007126
"meiosis" evidence=IEA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 SGD:S000000981 GO:GO:0005524
GO:GO:0016887 GO:GO:0030435 EMBL:BK006939 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:U18922 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709 EMBL:M87549
EMBL:D10865 PIR:A38214 RefSeq:NP_011106.1 ProteinModelPortal:P25453
SMR:P25453 DIP:DIP-110N IntAct:P25453 MINT:MINT-387175
STRING:P25453 PeptideAtlas:P25453 EnsemblFungi:YER179W
GeneID:856926 KEGG:sce:YER179W CYGD:YER179w NextBio:983398
Genevestigator:P25453 GermOnline:YER179W Uniprot:P25453
Length = 334
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/317 (50%), Positives = 216/317 (68%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
V++LQ GI A D++KLK G+ TV +V + R+ L +IKG+SE KV+KI EAA K++ +
Sbjct: 19 VDELQNYGINASDLQKLKSGGIYTVNTVLSTTRRHLCKIKGLSEVKVEKIKEAAGKIIQV 78
Query: 88 GFTSAT-QLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVT 146
GF AT QL R + +++GS++LD IL GG+ T SITE++GEFR GKTQ+ HTLCVT
Sbjct: 79 GFIPATVQLDI-RQRVYSLSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVT 137
Query: 147 CQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRL 206
QLP + GGGEGK YID EGTFRP+R+ QIA+ Y L+ L NV+YARA N++HQ L
Sbjct: 138 TQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYARALNSEHQMEL 197
Query: 207 LLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
+ + + + L++VDS A +R D+ GRGELS RQ L + L L +LA+EF VAV
Sbjct: 198 VEQLGEELSSGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNVAV 257
Query: 267 VITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
+TNQV + SA+FA KPIGG+++AHAS TR+ LRKGRG+ER+ K+ SP + E
Sbjct: 258 FLTNQVQSDPGASALFASADGRKPIGGHVLAHASATRILLRKGRGDERVAKLQDSPDMPE 317
Query: 326 AEARFQISAQGVADVKD 342
E + I +G+ D D
Sbjct: 318 KECVYVIGEKGITDSSD 334
>UNIPROTKB|Q9GRA3 [details] [associations]
symbol:CnDmc1 "DMC1 homologue CnDMC1" species:6087 "Hydra
vulgaris" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AB047581 ProteinModelPortal:Q9GRA3 SMR:Q9GRA3 Uniprot:Q9GRA3
Length = 331
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 158/317 (49%), Positives = 215/317 (67%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ+ GI D+KKLK G+CTV+ + + +++LLQIKGISEAKVDKI EA +K
Sbjct: 15 IDVLQSHGINVADIKKLKSVGICTVKGIQMTTKRKLLQIKGISEAKVDKIKEAVAKCCSS 74
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + R + +I++GS ELDK+L GG+E+ SITE +GEFR+GKTQ+ HTLCVT
Sbjct: 75 GFFTALEYSEIRKQCFRISTGSMELDKLLGGGIESMSITEAFGEFRTGKTQISHTLCVTA 134
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP GK M+ID E TFRP RL IADR+ L+ +L N+ + RAY ++ Q +L
Sbjct: 135 QLPGPNNYPGGKVMFIDTENTFRPNRLRSIADRFNLDHEAMLGNIVFCRAYTSEQQFEVL 194
Query: 208 -LEAASMMVETR-FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
+ +A E F L+I+DS AL+R D+SGRGEL+ RQ L + L LQK+++E+ VA
Sbjct: 195 DMVSAKFHEEAGVFKLLIIDSIMALFRVDYSGRGELADRQQKLGQMLSKLQKISEEYNVA 254
Query: 266 VVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
V ITNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+ SP L E
Sbjct: 255 VWITNQMTADPGATMSFQSDPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPDLPE 314
Query: 326 AEARFQISAQGVADVKD 342
EA + I+ +G+ D K+
Sbjct: 315 CEATYAITNEGITDAKE 331
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 157/315 (49%), Positives = 214/315 (67%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ ++A GI A DV KLK G TV SV + R+ LL+IKG SE KV+KI +A K +P
Sbjct: 19 IDNIEAHGIGAADVIKLKAHGYFTVASVHGATRRTLLKIKGFSEIKVEKIKDAIQKCLPT 78
Query: 88 --GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCV 145
GF +A +L QR ++ +I++GS++ D IL GG ++ SI+E+YGEFR GKTQL HT+ V
Sbjct: 79 ANGFITAIELCHQRKKVFKISTGSKQFDTILGGGFQSSSISEVYGEFRCGKTQLSHTMSV 138
Query: 146 TCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSR 205
QLP + GGGEGK YID EGTFRP R+ QIA+RYGL+ EN++YARA N++HQ
Sbjct: 139 IAQLPKEMGGGEGKVAYIDTEGTFRPDRIAQIAERYGLDAESTQENISYARALNSEHQLE 198
Query: 206 LLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
LL + ++ L+++DS +R DFSGRGEL+ RQ L +FL L LA+EF V
Sbjct: 199 LLNTLSKEFAGGQYRLLVIDSIMNCFRVDFSGRGELAERQQKLNQFLIRLSHLAEEFNVC 258
Query: 266 VVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLA 324
V++TNQV + SA+FAG KP+GG+++AHASTTR+ LRKGRG+ER+ K+ SP
Sbjct: 259 VLMTNQVQSDPGASALFAGADGRKPVGGHVLAHASTTRVLLRKGRGDERVAKIQDSPDCP 318
Query: 325 EAEARFQISAQGVAD 339
E EA + I+ G+ D
Sbjct: 319 EREATYVITNGGIND 333
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 155/315 (49%), Positives = 218/315 (69%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
V++LQ GI D+ K A + TV V + R++LL+IKG+SEAKV+KI EAA K+
Sbjct: 33 VDELQQHGINVQDITK--SAAINTVSGVIMTTRRQLLKIKGMSEAKVEKIKEAAQKIHGS 90
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
F + ++ +R ++ I++GS+ +D IL GGV + SITE+YGE+R+GKTQL HT+ V
Sbjct: 91 SFATGVEIQDKRKRVLVISTGSKLVDGILGGGVMSQSITEVYGEYRTGKTQLAHTMSVVA 150
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL 207
QLP + GG GK YID EGTFRP R+ IADR+G++G LEN+ YARA+N++HQ L+
Sbjct: 151 QLPPEYGGAAGKVAYIDTEGTFRPDRIRAIADRFGVDGTMALENILYARAFNSEHQMELI 210
Query: 208 LEAASMMVETR-FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAV 266
E ++ E + F L+I+DS AL+R D+SGRGELS RQ LA+ L L KL++EF +AV
Sbjct: 211 NECSARFAEDKDFRLLIIDSIMALFRVDYSGRGELSERQQKLAQMLSKLTKLSEEFNIAV 270
Query: 267 VITNQVVAQVDGSAIF-AGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 325
++TNQV + + F AG +KPIGG+I++HAS TR+ LRKGR EER+ K++ SP E
Sbjct: 271 LMTNQVQSDPGATMTFVAGGALKPIGGHILSHASATRIFLRKGRAEERVAKLVDSPDRPE 330
Query: 326 AEARFQISAQGVADV 340
+EA +++ G ADV
Sbjct: 331 SEASYKLDEGGWADV 345
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 155/315 (49%), Positives = 214/315 (67%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ +QA GI A D+ KLK G T+ S+ + RK LL+IKG SE KV+KI EA +K +P
Sbjct: 19 IDCIQAHGIGAADITKLKANGFFTIASIHGATRKTLLKIKGFSEIKVEKIKEAINKCLPS 78
Query: 88 --GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCV 145
GF +A +L QR +++I++GS++ D IL GG ++ SI+E++GEFR GKTQL HT+ V
Sbjct: 79 ASGFITAMELSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSV 138
Query: 146 TCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSR 205
QLP D GG EGK YID EGTFRP+R+ QIA+R+G++ EN+AYARA N++HQ
Sbjct: 139 VAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLE 198
Query: 206 LLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
LL + V + L+I+DS +R DF GRGEL+ RQ L +FL L +A+EF V
Sbjct: 199 LLNTLSKEFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAEEFNVC 258
Query: 266 VVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLA 324
V++TNQV + SA+F+G KP+GG+++AHASTTR+ LRKGRGEER+ K+ SP
Sbjct: 259 VLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRVLLRKGRGEERVAKIQDSPDCP 318
Query: 325 EAEARFQISAQGVAD 339
E EA + I+ G+ D
Sbjct: 319 EREATYLITNGGIDD 333
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 155/315 (49%), Positives = 214/315 (67%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ +QA GI A D+ KLK G T+ S+ + RK LL+IKG SE KV+KI EA +K +P
Sbjct: 19 IDCIQAHGIGAADITKLKANGFFTIASIHGATRKTLLKIKGFSEIKVEKIKEAINKCLPS 78
Query: 88 --GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCV 145
GF +A +L QR +++I++GS++ D IL GG ++ SI+E++GEFR GKTQL HT+ V
Sbjct: 79 ASGFITAMELSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSV 138
Query: 146 TCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSR 205
QLP D GG EGK YID EGTFRP+R+ QIA+R+G++ EN+AYARA N++HQ
Sbjct: 139 VAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLE 198
Query: 206 LLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
LL + V + L+I+DS +R DF GRGEL+ RQ L +FL L +A+EF V
Sbjct: 199 LLNTLSKEFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAEEFNVC 258
Query: 266 VVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLA 324
V++TNQV + SA+F+G KP+GG+++AHASTTR+ LRKGRGEER+ K+ SP
Sbjct: 259 VLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRVLLRKGRGEERVAKIQDSPDCP 318
Query: 325 EAEARFQISAQGVAD 339
E EA + I+ G+ D
Sbjct: 319 EREATYLITNGGIDD 333
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 155/315 (49%), Positives = 214/315 (67%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ +QA GI A D+ KLK G T+ S+ + RK LL+IKG SE KV+KI EA +K +P
Sbjct: 19 IDCIQAHGIGAADITKLKANGFFTIASIHGATRKTLLKIKGFSEIKVEKIKEAINKCLPS 78
Query: 88 --GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCV 145
GF +A +L QR +++I++GS++ D IL GG ++ SI+E++GEFR GKTQL HT+ V
Sbjct: 79 ASGFITAMELSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSV 138
Query: 146 TCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSR 205
QLP D GG EGK YID EGTFRP+R+ QIA+R+G++ EN+AYARA N++HQ
Sbjct: 139 VAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLE 198
Query: 206 LLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
LL + V + L+I+DS +R DF GRGEL+ RQ L +FL L +A+EF V
Sbjct: 199 LLNTLSKEFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAEEFNVC 258
Query: 266 VVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLA 324
V++TNQV + SA+F+G KP+GG+++AHASTTR+ LRKGRGEER+ K+ SP
Sbjct: 259 VLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRVLLRKGRGEERVAKIQDSPDCP 318
Query: 325 EAEARFQISAQGVAD 339
E EA + I+ G+ D
Sbjct: 319 EREATYLITNGGIDD 333
>RGD|1563603 [details] [associations]
symbol:Rad51 "RAD51 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000800 "lateral element"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 RGD:1563603
GO:GO:0005524 GO:GO:0005634 GO:GO:0042493 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 IPI:IPI00948014 Ensembl:ENSRNOT00000068607
UCSC:RGD:1563603 ArrayExpress:F1LZR2 Uniprot:F1LZR2
Length = 236
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 140/178 (78%), Positives = 167/178 (93%)
Query: 125 ITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLN 184
ITE++GEFR+GKTQ+CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+RYGL+
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLS 60
Query: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSAR 244
G+DVL+NVAYAR +NTDHQ++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSAR
Sbjct: 61 GSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSAR 120
Query: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 302
QMHLA+FLR L +LADEFGVAVVITNQVVAQVDG+A+FA KPIGGNI+AHASTTR
Sbjct: 121 QMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTR 178
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 150/316 (47%), Positives = 208/316 (65%)
Query: 28 VEQLQASGIAALD-VKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVP 86
++ +QA G + KLK G TV SV + RK LL+IKG SE KV+KI EA K +P
Sbjct: 19 IDSIQAHGTPRPTYITKLKANGFYTVASVHGATRKTLLKIKGFSEFKVEKIKEAIQKCLP 78
Query: 87 L--GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLC 144
GF +A +L QR +++I++GS++ D IL GG ++ SI+E++GEFR GKTQL HT+
Sbjct: 79 AASGFITAMELSHQRKRVVKISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMS 138
Query: 145 VTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQS 204
V QLP + GG +GK YID EGTFRP+R+ QIA+R+ ++ EN+AYARA N++HQ
Sbjct: 139 VVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAERFSVDPDSAQENIAYARALNSEHQL 198
Query: 205 RLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGV 264
LL + + L+I+DS +R D+ GRGEL+ RQ L +FL L +A+EF V
Sbjct: 199 ELLNTLSREFAGGEYRLLIIDSIMNCFRVDYCGRGELADRQQKLNQFLMRLAHMAEEFNV 258
Query: 265 AVVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 323
V++TNQV + SA+FAG KP+GG+++AHASTTR+ LRKGRGEER+ K+ SP
Sbjct: 259 CVLMTNQVQSDPGASALFAGADGRKPVGGHVLAHASTTRVLLRKGRGEERVAKIQDSPDC 318
Query: 324 AEAEARFQISAQGVAD 339
E EA + I+ G+ D
Sbjct: 319 PEREATYVITNGGIND 334
>UNIPROTKB|B4DMW6 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320 UniGene:Hs.339396
HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171 EMBL:AK297664
ProteinModelPortal:B4DMW6 SMR:B4DMW6 STRING:B4DMW6
Ensembl:ENST00000428462 UCSC:uc011anv.1 ArrayExpress:B4DMW6
Bgee:B4DMW6 Uniprot:B4DMW6
Length = 285
Score = 346 (126.9 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 73/144 (50%), Positives = 96/144 (66%)
Query: 201 DHQSRLLLEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
+HQ LL A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+
Sbjct: 142 EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI 201
Query: 259 ADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVI 318
++E+ VAV +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+
Sbjct: 202 SEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIY 261
Query: 319 SSPCLAEAEARFQISAQGVADVKD 342
SP + E EA F I+A G+ D K+
Sbjct: 262 DSPEMPENEATFAITAGGIGDAKE 285
Score = 323 (118.8 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 62/124 (50%), Positives = 88/124 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLC
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCGEH 143
Query: 148 QLPL 151
Q+ L
Sbjct: 144 QMEL 147
>UNIPROTKB|E2R3A3 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR010995 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000075091
EMBL:AAEX03007314 Ensembl:ENSCAFT00000035193 Uniprot:E2R3A3
Length = 285
Score = 345 (126.5 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 73/144 (50%), Positives = 96/144 (66%)
Query: 201 DHQSRLLLEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
+HQ LL A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+
Sbjct: 142 EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI 201
Query: 259 ADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVI 318
++E+ VAV +TNQ+ A + F KPIGG+I+AHASTTR++LRKGRGE RI K+
Sbjct: 202 SEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRVSLRKGRGELRIAKIY 261
Query: 319 SSPCLAEAEARFQISAQGVADVKD 342
SP + E EA F I+A G+ D K+
Sbjct: 262 DSPEMPENEATFAITAGGIGDAKE 285
Score = 323 (118.8 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 62/124 (50%), Positives = 88/124 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLC
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCGEH 143
Query: 148 QLPL 151
Q+ L
Sbjct: 144 QMEL 147
>UNIPROTKB|E9PNT5 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00980924
ProteinModelPortal:E9PNT5 SMR:E9PNT5 Ensembl:ENST00000527860
UCSC:uc001zmn.1 ArrayExpress:E9PNT5 Bgee:E9PNT5 Uniprot:E9PNT5
Length = 172
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 108/152 (71%), Positives = 135/152 (88%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLL 175
VTCQLP+D+GGGEGKAMYID EGTFRP+RLL
Sbjct: 141 AVTCQLPIDRGGGEGKAMYIDTEGTFRPERLL 172
>UNIPROTKB|Q0U9F0 [details] [associations]
symbol:SNOG_11614 "Putative uncharacterized protein"
species:321614 "Phaeosphaeria nodorum SN15" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709
EMBL:CH445343 RefSeq:XP_001801853.1 ProteinModelPortal:Q0U9F0
EnsemblFungi:SNOT_11614 GeneID:5978761 KEGG:pno:SNOG_11614
Uniprot:Q0U9F0
Length = 353
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 113/247 (45%), Positives = 156/247 (63%)
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEI---YG-------EFRSG-- 135
GF +A +L QR +++I++GS++LD IL G V +I Y E + G
Sbjct: 89 GFQTAHELGQQRKRVLKISTGSKQLDTILGGWVHASLRLKIMIAYTLKWLPDYEHQRGLR 148
Query: 136 KTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYA 195
+ L V LP D GG EGK YID EGTFRP+R+ QIA+R+G++ +N+ YA
Sbjct: 149 RVPLWKDADVPYYLPKDMGGAEGKVAYIDTEGTFRPERIAQIAERFGVDPETTQDNITYA 208
Query: 196 RAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSL 255
RA N++HQ LL + A V + L+I+DS AL+R D++GRGEL+ RQ L +FL L
Sbjct: 209 RAVNSEHQMELLNKVAEFFVGNEYRLLIIDSIMALFRVDYTGRGELNERQQKLNQFLSKL 268
Query: 256 QKLADEFGVAVVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEERI 314
+A+EF VAV++TNQV + SA+FAG KP+GG+I+AHAS TR+ LRKGRGEER+
Sbjct: 269 THVAEEFNVAVLLTNQVQSDPGASALFAGADGRKPVGGHILAHASATRILLRKGRGEERV 328
Query: 315 CKVISSP 321
K+ SP
Sbjct: 329 AKIQDSP 335
Score = 178 (67.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 43/102 (42%), Positives = 65/102 (63%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKL--- 84
++ +QA GI A+D+ KLK G T+ SV + R+ LL+IKG SE KVDK+ +A +K
Sbjct: 20 IDAIQAHGIGAVDIAKLKANGYYTIASVHSATRRNLLKIKGFSEIKVDKVKDAITKCQVT 79
Query: 85 VPL------GFTSATQLHAQRLEIIQITSGSRELDKILEGGV 120
+ L GF +A +L QR +++I++GS++LD IL G V
Sbjct: 80 ISLALHSGGGFQTAHELGQQRKRVLKISTGSKQLDTILGGWV 121
>UNIPROTKB|E9PJ30 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00976981
ProteinModelPortal:E9PJ30 SMR:E9PJ30 Ensembl:ENST00000525066
ArrayExpress:E9PJ30 Bgee:E9PJ30 Uniprot:E9PJ30
Length = 151
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 85/126 (67%), Positives = 110/126 (87%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASK 83
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+K
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAK 80
Query: 84 LVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
LVP+GFT+AT+ H +R EIIQIT+GS+ELDK+L+GG+ETGSITE++GEFR+GKTQ+CHTL
Sbjct: 81 LVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 140
Query: 144 CVTCQL 149
VTCQ+
Sbjct: 141 AVTCQV 146
>UNIPROTKB|B0QYE0 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320
UniGene:Hs.339396 HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171
SMR:B0QYE0 STRING:B0QYE0 Ensembl:ENST00000439567 Uniprot:B0QYE0
Length = 203
Score = 323 (118.8 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 62/124 (50%), Positives = 88/124 (70%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTLC
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCGEH 143
Query: 148 QLPL 151
Q+ L
Sbjct: 144 QMEL 147
Score = 132 (51.5 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 201 DHQSRLLLEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
+HQ LL A+ E F L+I+DS AL+R DFSGRGEL+ RQ LA+ L LQK+
Sbjct: 142 EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI 201
Query: 259 AD 260
++
Sbjct: 202 SE 203
>UNIPROTKB|B0QYE1 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0000239 "pachytene"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] InterPro:IPR010995 InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006259 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320
UniGene:Hs.339396 HGNC:HGNC:2927 IPI:IPI00880014 SMR:B0QYE1
STRING:B0QYE1 Ensembl:ENST00000415483 HOGENOM:HOG000172484
HOVERGEN:HBG071410 Uniprot:B0QYE1
Length = 139
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/116 (50%), Positives = 84/116 (72%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTL 143
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +GEFR+GKTQL HTL
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTL 139
>UNIPROTKB|O15315 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
GO:GO:0005524 GO:GO:0005654 EMBL:CH471061 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007131 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 MIM:150699 EMBL:U92074 EMBL:U84138 EMBL:Y15571
EMBL:BX161515 EMBL:BX248061 EMBL:BX248766 EMBL:DQ160197
EMBL:AC004518 EMBL:CR536560 EMBL:BC030219 EMBL:AY138857
EMBL:AY138858 EMBL:AY138859 IPI:IPI00006105 IPI:IPI00220523
IPI:IPI00386489 IPI:IPI00386490 IPI:IPI00395987 RefSeq:NP_002868.1
RefSeq:NP_598193.2 RefSeq:NP_598194.1 UniGene:Hs.172587
ProteinModelPortal:O15315 SMR:O15315 IntAct:O15315 MINT:MINT-224850
STRING:O15315 PhosphoSite:O15315 PRIDE:O15315 DNASU:5890
Ensembl:ENST00000390683 Ensembl:ENST00000471583
Ensembl:ENST00000487270 Ensembl:ENST00000488612 GeneID:5890
KEGG:hsa:5890 UCSC:uc001xkd.3 UCSC:uc001xke.3 UCSC:uc001xkf.2
UCSC:uc001xkg.2 UCSC:uc010aqr.3 CTD:5890 GeneCards:GC14P068287
H-InvDB:HIX0022466 HGNC:HGNC:9822 HPA:CAB016191 MIM:602948
neXtProt:NX_O15315 PharmGKB:PA34178 HOVERGEN:HBG061476
InParanoid:O15315 KO:K10869 OMA:CIMMSVL PhylomeDB:O15315
ChiTaRS:RAD51B GenomeRNAi:5890 NextBio:22908 ArrayExpress:O15315
Bgee:O15315 Genevestigator:O15315 Uniprot:O15315
Length = 384
Score = 260 (96.6 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 78/275 (28%), Positives = 131/275 (47%)
Query: 29 EQLQASGIAALDVKKLKDAGLCTVES-VAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++L+ G++ +L + T + + SP EL+++ G+S V +++ S+
Sbjct: 4 KKLKRVGLSQELCDRLSRHQILTCQDFLCLSPL-ELMKVTGLSYRGVHELLCMVSRACAP 62
Query: 88 GFTSATQLHAQRLEIIQ---ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLC 144
+A + AQR +++ LD+ L GGV GS+TEI G GKTQ C +
Sbjct: 63 KMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 145 VTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD----RYGLNGADVL----ENVAYAR 196
+ LP + GG EG +YID E F +RL++IA+ RY N + L V R
Sbjct: 123 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRY-FNTEEKLLLTSSKVHLYR 181
Query: 197 AYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGR--GELSARQMHLAKFLRS 254
D + + ++ L+I+DS ++ R +F + G L R LA+ S
Sbjct: 182 ELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASS 241
Query: 255 LQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKP 289
L+ LA+EF + V++TNQ+ + G+ + P
Sbjct: 242 LKYLAEEFSIPVILTNQITTHLSGALASQADLVSP 276
Score = 48 (22.0 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 292 GNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQISAQGV 337
GN +H+ TRL L+ E R + SP + I +G+
Sbjct: 297 GNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTIKEEGL 342
>ZFIN|ZDB-GENE-041010-204 [details] [associations]
symbol:rad51c "rad51 homolog C (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 ZFIN:ZDB-GENE-041010-204 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5889 HOVERGEN:HBG055764 KO:K10870
OrthoDB:EOG4CRM09 EMBL:BC083214 IPI:IPI00498753
RefSeq:NP_001006101.1 UniGene:Dr.83418 ProteinModelPortal:Q5XJT2
STRING:Q5XJT2 GeneID:450081 KEGG:dre:450081 InParanoid:Q5XJT2
NextBio:20833059 ArrayExpress:Q5XJT2 Uniprot:Q5XJT2
Length = 362
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 107/338 (31%), Positives = 157/338 (46%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
V+ + A AA D+ ++ LC ++ ELLQ+ +A+ + AA
Sbjct: 16 VKLINAGFQAASDLTDMRPLQLCKEAGISQEEAVELLQMLR-DDAQPQQQRAAAD----- 69
Query: 88 GFTSATQLHAQRL--EIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCV 145
G T+ LH ++ I+ SG LD + GGV G TEI G GKTQLC L V
Sbjct: 70 GVTALDLLHQEQTLGSIVTFCSG---LDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAV 126
Query: 146 TCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------RYG----LNGAD 187
Q+P+ GG GKA+YID EG+F QR+ +A+ + G LN
Sbjct: 127 DVQIPVFFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEK 186
Query: 188 VLENVAYARAYNTDH---QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSAR 244
+L N+ R ++ + LL + S E R L+++DS +R DF +LS R
Sbjct: 187 ILSNLFLVRCHDYVKLLAEVYLLPDFLSEHPEVR--LVVIDSIAFPFRHDFE---DLSQR 241
Query: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLA 304
L + L +LA + VAVV+TNQ+ +V ++ P G HA+T RL
Sbjct: 242 TRLLNGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQ----SKLVPALGESWGHAATQRLI 297
Query: 305 LRKGRGEERICKVISSPCLAEAEARFQISAQGVADVKD 342
L G+ R+ + SP EA ++QI+ QG D D
Sbjct: 298 LH-WEGQRRLASLYKSPSQMEATVQYQITVQGFRDSPD 334
>UNIPROTKB|C9JYJ0 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
HGNC:HGNC:9822 ChiTaRS:RAD51B HOGENOM:HOG000154062 EMBL:AL121595
EMBL:AL121820 EMBL:AL122013 EMBL:AL132986 EMBL:AL133313
EMBL:AL133370 EMBL:AL136294 EMBL:AL157915 EMBL:AL589168
IPI:IPI00945688 ProteinModelPortal:C9JYJ0 SMR:C9JYJ0 STRING:C9JYJ0
Ensembl:ENST00000487861 ArrayExpress:C9JYJ0 Bgee:C9JYJ0
Uniprot:C9JYJ0
Length = 425
Score = 260 (96.6 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 78/275 (28%), Positives = 131/275 (47%)
Query: 29 EQLQASGIAALDVKKLKDAGLCTVES-VAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++L+ G++ +L + T + + SP EL+++ G+S V +++ S+
Sbjct: 4 KKLKRVGLSQELCDRLSRHQILTCQDFLCLSPL-ELMKVTGLSYRGVHELLCMVSRACAP 62
Query: 88 GFTSATQLHAQRLEIIQ---ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLC 144
+A + AQR +++ LD+ L GGV GS+TEI G GKTQ C +
Sbjct: 63 KMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 145 VTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD----RYGLNGADVL----ENVAYAR 196
+ LP + GG EG +YID E F +RL++IA+ RY N + L V R
Sbjct: 123 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRY-FNTEEKLLLTSSKVHLYR 181
Query: 197 AYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGR--GELSARQMHLAKFLRS 254
D + + ++ L+I+DS ++ R +F + G L R LA+ S
Sbjct: 182 ELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASS 241
Query: 255 LQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKP 289
L+ LA+EF + V++TNQ+ + G+ + P
Sbjct: 242 LKYLAEEFSIPVILTNQITTHLSGALASQADLVSP 276
Score = 48 (22.0 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 292 GNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQISAQGV 337
GN +H+ TRL L+ E R + SP + I +G+
Sbjct: 297 GNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTIKEEGL 342
>UNIPROTKB|E1BE93 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 KO:K10869 OMA:CIMMSVL
GeneTree:ENSGT00550000074609 EMBL:DAAA02029475 EMBL:DAAA02029476
EMBL:DAAA02029477 EMBL:DAAA02029478 IPI:IPI00729339
RefSeq:NP_001180066.1 UniGene:Bt.25511 Ensembl:ENSBTAT00000025252
GeneID:617007 KEGG:bta:617007 NextBio:20900440 Uniprot:E1BE93
Length = 364
Score = 252 (93.8 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 75/274 (27%), Positives = 131/274 (47%)
Query: 29 EQLQASGIAALDVKKLKDAGLCTVES-VAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++L+ G++ +L + T + + SP EL+++ G+S V +++ S+
Sbjct: 18 KKLRRVGLSQELCDRLNRHQIVTCQDFLCLSPL-ELMKMTGLSYQGVHELLCLVSRACAP 76
Query: 88 GFTSATQLHAQRLEIIQ---ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLC 144
+A ++ QR +++ LD+ L GGV GS+TEI G GKTQ C +
Sbjct: 77 QMQTAYEIKTQRCAAHSSAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 136
Query: 145 VTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD----RYGLNGADVLENVAYARAYNT 200
+ LP + GG EG +YID E F +RL++IA+ RY +L + Y
Sbjct: 137 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRE 196
Query: 201 DHQSRLLLEAASM---MVETRFALMIVDSATALYRTDFSGR--GELSARQMHLAKFLRSL 255
+L S+ ++ L+I+DS ++ R +F + G + R LA+ SL
Sbjct: 197 LSCDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASL 256
Query: 256 QKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKP 289
+ LA+EF + V++TNQ+ + G+ + P
Sbjct: 257 KYLAEEFSIPVILTNQITTHLSGALASQADLVSP 290
Score = 47 (21.6 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 292 GNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQISAQGV 337
GN +H+ TRL L+ E R + SP + I +G+
Sbjct: 311 GNTWSHSVNTRLILQYLGSERRQILIAKSPLAPFTAFVYTIEKEGL 356
>MGI|MGI:1099436 [details] [associations]
symbol:Rad51b "RAD51 homolog B" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1099436 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869 OMA:CIMMSVL
EMBL:U92068 EMBL:AK015771 EMBL:AK032913 IPI:IPI00331068
IPI:IPI00399712 RefSeq:NP_001239491.1 RefSeq:NP_033040.2
UniGene:Mm.341756 ProteinModelPortal:O35719 SMR:O35719
MINT:MINT-205633 STRING:O35719 PhosphoSite:O35719 PRIDE:O35719
Ensembl:ENSMUST00000079533 GeneID:19363 KEGG:mmu:19363
UCSC:uc007oai.1 UCSC:uc007oaj.1 GeneTree:ENSGT00550000074609
HOGENOM:HOG000154062 InParanoid:O35719 OrthoDB:EOG4G4GQP
NextBio:296429 Bgee:O35719 CleanEx:MM_RAD51L1 Genevestigator:O35719
Uniprot:O35719
Length = 350
Score = 247 (92.0 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 73/237 (30%), Positives = 115/237 (48%)
Query: 55 VAYSPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHAQR---LEIIQITSGSRE 111
++ SP EL+++ G+S V +++ SK +A +L +R L +++
Sbjct: 31 LSLSPL-ELMKVTGLSYRGVHELLHTVSKACAPQMQTAYELKTRRSAHLSPAFLSTTLCA 89
Query: 112 LDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRP 171
LD+ L GGV GS+TEI G GKTQ C + V LP GG EG +YID E F
Sbjct: 90 LDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTA 149
Query: 172 QRLLQIAD-RYG--LNGADVL----ENVAYARAYNTDHQSRLLLEAASMMVETRFALMIV 224
+RL++IA+ R+ N + L V R + + L ++ L+IV
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISKGVKLVIV 209
Query: 225 DSATALYRTDFSGR--GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
DS ++ R +F + G + R L K L+ LA EF + V++TNQ+ + G+
Sbjct: 210 DSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITTHLSGA 266
Score = 52 (23.4 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 292 GNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQISAQGV 337
GN H TRL L+ E R + SP A + I +G+
Sbjct: 297 GNTWGHCVNTRLILQYLDSERRQILIAKSPLAAFTSFVYTIKGEGL 342
>TAIR|locus:2174577 [details] [associations]
symbol:XRCC3 "homolog of X-ray repair cross complementing
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=RCA;IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IDA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0045003 EMBL:AB011482
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AB062455 EMBL:AB073492
EMBL:AJ438908 EMBL:AJ438909 EMBL:AY032998 IPI:IPI00533166
RefSeq:NP_200554.1 RefSeq:NP_851202.1 UniGene:At.26227
UniGene:At.67214 ProteinModelPortal:Q9FKM5 SMR:Q9FKM5 STRING:Q9FKM5
EnsemblPlants:AT5G57450.1 EnsemblPlants:AT5G57450.2 GeneID:835850
KEGG:ath:AT5G57450 GeneFarm:4801 TAIR:At5g57450
HOGENOM:HOG000239162 InParanoid:Q9FKM5 KO:K10880 OMA:YSPETPN
PhylomeDB:Q9FKM5 ProtClustDB:CLSN2687414 Genevestigator:Q9FKM5
GermOnline:AT5G57450 Uniprot:Q9FKM5
Length = 304
Score = 231 (86.4 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 63/197 (31%), Positives = 101/197 (51%)
Query: 104 QITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
++T+G LD L GG+ S+TEI E GKTQLC L + QLP+ GG G ++Y+
Sbjct: 20 KLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYL 79
Query: 164 DAEGTFRPQRLLQIADRYGLNGADVLEN--------VAYARAYNTDHQSRLLLEAASMM- 214
+E F +RL Q++ + + + N V ++ DH ++ +
Sbjct: 80 HSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLFDIMPRIDGFVG 139
Query: 215 -VETRFAL--MIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITN 270
+TRF L +++DS AL+R++F +L R K L++LA +F +A+VITN
Sbjct: 140 NSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDLAIVITN 199
Query: 271 QVVAQVDGSAIFAGPQI 287
QV V+ S +G +I
Sbjct: 200 QVTDLVETSDGLSGLRI 216
Score = 44 (20.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 309 RGEERICKVISSPCLAEAEARFQISAQGVADVK 341
R +R ++ SP L + F I+ +G+ V+
Sbjct: 271 RSAKRRLDIVFSPYLPGSSCEFMITREGICAVQ 303
>UNIPROTKB|J9NV21 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR010995 InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314
Ensembl:ENSCAFT00000043221 Uniprot:J9NV21
Length = 128
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 48/103 (46%), Positives = 72/103 (69%)
Query: 28 VEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++ LQ GI D+KKLK G+CT++ + + R+ L +KG+SEAKVDKI EAA+KL+
Sbjct: 24 IDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEP 83
Query: 88 GFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYG 130
GF +A + +R + IT+GS+E DK+L GG+E+ +ITE +G
Sbjct: 84 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFG 126
>UNIPROTKB|F1S9W9 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:INQVTEA
EMBL:CU694215 Ensembl:ENSSSCT00000002829 Uniprot:F1S9W9
Length = 347
Score = 235 (87.8 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 91/297 (30%), Positives = 140/297 (47%)
Query: 36 IAALDVK-KLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLGFTS-AT 93
+AA+ V KLK A E + +S +L ++ G+S V ++ A S + G S A
Sbjct: 13 VAAVKVSAKLKSAR----EVLRFSG-PDLQRLTGLSGPDVQHLLRAVSSHLRGGSVSTAL 67
Query: 94 QLHAQRLEIIQ----ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQL 149
QL+ Q E + ++ G LD +L GG+ ITE+ G +GKTQL LC+ QL
Sbjct: 68 QLYRQEEEFPEQHQRLSLGCPVLDGLLRGGLPLDGITELAGRSSTGKTQLALQLCLAVQL 127
Query: 150 PLDQGG-GEGKAMYIDAEGTFRPQRLLQ-IADRYGLNG---ADVLENVAYARAYNTDHQS 204
P GG G G A+Y+ EG F +RL Q +A + L DVL + + +H +
Sbjct: 128 PRQHGGLGTG-AVYVCTEGAFPSRRLQQLVAQQQLLRPDVPGDVLGKIKFGDQIFVEHVA 186
Query: 205 RL--LLEAASMMVETRFA-----LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQK 257
+ LL+ S V + L+++DS A +R +F+G + + R L L++
Sbjct: 187 DVDTLLDCVSRKVPVLLSRGVARLLVIDSVAAPFRCEFAG-ADSARRARRLQALGAELRR 245
Query: 258 LADEFGVAVVITNQVVAQVDG--SAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEE 312
L+ F V+ NQV VD +A G + P G + RL + + R EE
Sbjct: 246 LSCAFRSPVLCINQVTEAVDAHEAAGAGGERTSPALGITWSSQLLMRLLMDRRRPEE 302
>ZFIN|ZDB-GENE-040426-2750 [details] [associations]
symbol:rad51b "RAD51 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 ZFIN:ZDB-GENE-040426-2750
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869
HOGENOM:HOG000154062 HSSP:O74036 EMBL:BC052122 IPI:IPI00506696
RefSeq:NP_998577.1 UniGene:Dr.123796 ProteinModelPortal:Q7ZTX4
PRIDE:Q7ZTX4 GeneID:406721 KEGG:dre:406721 InParanoid:Q7ZTX4
NextBio:20818241 ArrayExpress:Q7ZTX4 Bgee:Q7ZTX4 Uniprot:Q7ZTX4
Length = 373
Score = 235 (87.8 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 78/257 (30%), Positives = 126/257 (49%)
Query: 29 EQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
++L+ SG++A ++LK L T + V + EL ++ G+S + SK
Sbjct: 4 KKLRRSGVSADLCERLKRHQLETCQDVLSVTQVELSRLAGLSYPAALNLQRLVSKACAPA 63
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
+A L ++ E+ TS LD++L GG+ G++TE+ G GKTQLC L V
Sbjct: 64 VITALDLWKRKEELCFSTS-LPALDRLLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLAT 122
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD-RYG--LNGAD-VLENVAYARAYN--TDH 202
LP GG + +YID E F +RL+++A R+ + + +LE A + T
Sbjct: 123 LPKSLGGLDSGVIYIDTESAFSAERLVEMAQSRFPEFFSVKERLLEMAARVHLFRELTCQ 182
Query: 203 QSRLLLEAASM-MVETRFALMIVDSATALYRTDF--SGRGELSARQMHLAKFLRSLQKLA 259
LE ++ R L+I+DS ++ R +F S G L+ R L + L+ L+
Sbjct: 183 DVLKRLERLEEDIIACRAGLVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVLKYLS 242
Query: 260 DEFGVAVVITNQVVAQV 276
EF + VV+TNQ+ V
Sbjct: 243 QEFCIPVVLTNQITTHV 259
>UNIPROTKB|F1SA21 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:CT797462
Ensembl:ENSSSCT00000002560 Uniprot:F1SA21
Length = 252
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 70/249 (28%), Positives = 121/249 (48%)
Query: 29 EQLQASGIAALDVKKLKDAGLCTVES-VAYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
++L+ G++ +L + T + + SP EL+++ G+S V ++ S+
Sbjct: 4 KKLRRVGLSQELCDRLNRHHIITCQDFLCLSPL-ELMKMTGLSYQGVHDLLCLVSRACAP 62
Query: 88 GFTSATQLHAQRLEIIQ---ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLC 144
+A ++ QR + +++ LD+ L GGV GS+TEI G GKTQ C +
Sbjct: 63 PMQTAYEIKTQRSAVPSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 145 VTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD----RYGLNGADVLENVAYARAYNT 200
+ LP+D GG EG +YID E F +RL+++A+ RY +L V+ Y
Sbjct: 123 ILATLPIDMGGLEGAVVYIDTESAFSAERLVEMAESRFPRYFSTEEKLLLTVSKVHLYRE 182
Query: 201 DHQSRLLLEAASM---MVETRFALMIVDSATALYRTDFSGR--GELSARQMHLAKFLRSL 255
+L S+ ++ L+I+DS ++ R +F + G + R LA+ SL
Sbjct: 183 LSCDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASL 242
Query: 256 QKLADEFGV 264
+ LA+EF +
Sbjct: 243 KYLAEEFSI 251
>UNIPROTKB|Q08DH8 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 EMBL:BC123742 IPI:IPI00717766 RefSeq:NP_001071585.1
UniGene:Bt.41484 ProteinModelPortal:Q08DH8 STRING:Q08DH8
PRIDE:Q08DH8 Ensembl:ENSBTAT00000013145 GeneID:768244
KEGG:bta:768244 CTD:7517 HOVERGEN:HBG054179 InParanoid:Q08DH8
OMA:INQVTEA OrthoDB:EOG47D9GS NextBio:20918540 Uniprot:Q08DH8
Length = 341
Score = 230 (86.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 86/291 (29%), Positives = 132/291 (45%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHAQRL 100
V +K A L +V+ V + +L + +S V ++ A++ L+ G T LH R
Sbjct: 13 VAAVKKAKLRSVKEVLHLSGPDLQRRTHLSSPDVQLLLRASASLLR-GHGVCTALHLLRQ 71
Query: 101 E------IIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQG 154
E +++ G LD +L GG+ ITE+ G +GKTQL LC+ QLP G
Sbjct: 72 EGPFPEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHG 131
Query: 155 G-GEGKAMYIDAEGTFRPQRLLQ-IADRYGLNG---ADVLENVAYARAYNTDHQSRL--L 207
G G G A+Y+ E F +RL Q IA + L V+ + + +H + + L
Sbjct: 132 GLGAG-AVYVCTEDAFPSRRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTL 190
Query: 208 LEAASMMVETRFA-----LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
L+ V A L+++DS A +R +F G L+ R L L++L+ F
Sbjct: 191 LQCVREKVPVLLARGMARLVVIDSVAAPFRCEFDGAA-LALRAQRLLALGAELRRLSCAF 249
Query: 263 GVAVVITNQVVAQVDGSAIFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEE 312
V+ NQV V+ + AGP + P G A+ RL + R EE
Sbjct: 250 RSPVLCVNQVTEAVEEQDLVAGPPGMSPALGITWANQLLVRLLADRQRPEE 300
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 221 LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA 280
L+++DS A +R +F G L+ R L L++L+ F V+ NQV V+
Sbjct: 209 LVVIDSVAAPFRCEFDGAA-LALRAQRLLALGAELRRLSCAFRSPVLCVNQVTEAVEEQD 267
Query: 281 IFAGPQ-IKPIGGNIMAHASTTRLALRKGRGEE-------RICKVISSPCLAEAEARFQI 332
+ AGP + P G A+ RL + R EE R +V+ +P L + + I
Sbjct: 268 LVAGPPGMSPALGITWANQLLVRLLADRQRPEEAPLTPPGRTLRVVFAPHLPASSCSYTI 327
Query: 333 SAQGV 337
+A+GV
Sbjct: 328 AAEGV 332
>UNIPROTKB|Q8R2J9 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0008094 GO:GO:0007062 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AJ413202
EMBL:AJ428572 RefSeq:NP_001231005.1 HSSP:O74036
ProteinModelPortal:Q8R2J9 GeneID:100689078 CTD:5889
HOVERGEN:HBG055764 Uniprot:Q8R2J9
Length = 366
Score = 157 (60.3 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 51/151 (33%), Positives = 75/151 (49%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
+L A+G A DV +K + L ++ E LQI E+ DK A + +
Sbjct: 17 KLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVR-RESLTDKPRCAGASVAGKK 75
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
+T+ L + + IT S LD IL GG+ TE+ G GKTQLC L V Q
Sbjct: 76 YTALELLEQEHTQGFIITFCSA-LDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQ 134
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD 179
+P GG G+A++ID EG+F R++ +A+
Sbjct: 135 IPECFGGVAGEAVFIDTEGSFMVDRVVTLAN 165
Score = 128 (50.1 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 182 GLNGADVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE 240
G ++L ++ Y R ++ T+ +++ L + ++ L+I+D +R D +
Sbjct: 189 GFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDLD---D 245
Query: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHAST 300
LS R L + + LA+ +AV++TNQ+ ++D + P + G HA+T
Sbjct: 246 LSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPAL----GESWGHAAT 301
Query: 301 TRLALRKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
RL + ++R + SP E+ FQI+ QG D
Sbjct: 302 IRLIFHWEQ-KQRFATLYKSPSQKESTIPFQITPQGFRD 339
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 98 QRLEIIQITSGSRELDKILEGGVETGSITEIY 129
Q L +I T E K LEG ++ IY
Sbjct: 169 QHLHLIAGTHKDEEHQKALEGFTLENILSHIY 200
>UNIPROTKB|E1BVI8 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 OMA:CIMMSVL GeneTree:ENSGT00550000074609
EMBL:AADN02003180 IPI:IPI00812156 Ensembl:ENSGALT00000015453
Uniprot:E1BVI8
Length = 275
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 60/217 (27%), Positives = 105/217 (48%)
Query: 62 ELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHAQRL---EIIQITSGSRELDKILEG 118
EL+++ G S V K++ S +A ++ +R + + LDK+L G
Sbjct: 37 ELMKVTGESYRNVQKLLRKVSLACAPKMQTAYEMKVRRSINPSAAFLPTSLHSLDKVLHG 96
Query: 119 GVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
G+ GS+TE+ GKTQ C T+ V LP+ GG +G +YID E F +RL++IA
Sbjct: 97 GIPCGSLTELTSPPGCGKTQFCITMSVLATLPVSMGGLDGAVIYIDTESAFSAERLIEIA 156
Query: 179 -DRYGLN-GAD-----VLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALY 231
+R+ +D + ++ R D + + ++ + L+I+DS ++
Sbjct: 157 GNRFPTYFDSDEKLFCMTRSIHLYRELTCDSVLKRIKSLEEEIISKKIKLIIIDSVASVV 216
Query: 232 RTDFSGR--GELSARQMHLAKFLRSLQKLADEFGVAV 266
R +F + G L+ R LA+ L+ +A+EF + V
Sbjct: 217 RKEFDTKLQGNLAERSNFLARGASLLKYVAEEFSIPV 253
>UNIPROTKB|O43542 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0010033 "response to organic substance" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 MIM:114480 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOGENOM:HOG000239162 KO:K10880 CTD:7517
HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS EMBL:AF035586
EMBL:AF037222 EMBL:AF508041 EMBL:BC001036 EMBL:BC002949
EMBL:BC011725 IPI:IPI00023073 RefSeq:NP_001093588.1
RefSeq:NP_001093589.1 RefSeq:NP_005423.1 UniGene:Hs.592325
UniGene:Hs.733412 ProteinModelPortal:O43542 SMR:O43542
IntAct:O43542 STRING:O43542 PhosphoSite:O43542 PaxDb:O43542
PRIDE:O43542 DNASU:7517 Ensembl:ENST00000352127
Ensembl:ENST00000445556 Ensembl:ENST00000553264
Ensembl:ENST00000554913 Ensembl:ENST00000555055 GeneID:7517
KEGG:hsa:7517 UCSC:uc001ynx.4 GeneCards:GC14M104163 HGNC:HGNC:12830
MIM:600675 MIM:613972 neXtProt:NX_O43542 PharmGKB:PA37422
InParanoid:O43542 PhylomeDB:O43542 GenomeRNAi:7517 NextBio:29415
ArrayExpress:O43542 Bgee:O43542 CleanEx:HS_XRCC3
Genevestigator:O43542 GermOnline:ENSG00000126215 Uniprot:O43542
Length = 346
Score = 225 (84.3 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 80/294 (27%), Positives = 133/294 (45%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS-KLVPLGFTSATQLHAQR 99
+ +K A L +V+ V + +L ++ +S +V ++ AS L +A QLH Q+
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 100 ----LEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG 155
+ +++ G LD +L GG+ ITE+ G +GKTQL LC+ Q P GG
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 156 GEGKAMYIDAEGTFRPQRLLQIADRYGLNGADV----LENVAYARAYNTDHQSRL--LLE 209
E A+YI E F +RL Q+ + DV L+ + + +H + + LLE
Sbjct: 133 LEAGAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLE 192
Query: 210 AASMMVETRFA-----LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGV 264
+ V + L+++DS A +R +F + + R HL +L++L+ F
Sbjct: 193 CVNKKVPVLLSRGMARLVVIDSVAAPFRCEFDSQAS-APRARHLQSLGATLRELSSAFQS 251
Query: 265 AVVITNQVVAQVDGSAIFAGP------QIKPIGGNIMAHASTTRLALRKGRGEE 312
V+ NQV ++ GP ++ P G A+ RL + R EE
Sbjct: 252 PVLCINQVTEAMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLREEE 305
>UNIPROTKB|O43502 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0048471 GO:GO:0005654 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007283 GO:GO:0006310
EMBL:CH471109 GO:GO:0007131 Orphanet:145 Orphanet:84 GO:GO:0007141
GO:GO:0008821 GO:GO:0008094 GO:GO:0007062 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 EMBL:AC025521 CTD:5889
HOVERGEN:HBG055764 KO:K10870 EMBL:AF029669 EMBL:AF029670
EMBL:AY623112 EMBL:AC011195 EMBL:BC107753 IPI:IPI00012829
IPI:IPI00040453 RefSeq:NP_002867.1 RefSeq:NP_478123.1
UniGene:Hs.412587 ProteinModelPortal:O43502 SMR:O43502
IntAct:O43502 MINT:MINT-204767 STRING:O43502 PhosphoSite:O43502
PRIDE:O43502 DNASU:5889 Ensembl:ENST00000337432
Ensembl:ENST00000421782 GeneID:5889 KEGG:hsa:5889 UCSC:uc002iwu.3
GeneCards:GC17P056769 HGNC:HGNC:9820 MIM:602774 MIM:613390
MIM:613399 neXtProt:NX_O43502 PharmGKB:PA34177 InParanoid:O43502
OMA:QRDLVSF OrthoDB:EOG4CRM09 PhylomeDB:O43502 GenomeRNAi:5889
NextBio:22902 ArrayExpress:O43502 Bgee:O43502 CleanEx:HS_RAD51C
Genevestigator:O43502 GermOnline:ENSG00000108384 Uniprot:O43502
Length = 376
Score = 149 (57.5 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 51/148 (34%), Positives = 70/148 (47%)
Query: 43 KLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKII-----EAASKLVPLGFTSATQLHA 97
KL AG T E + EL + GIS+A+ + + E + TS +
Sbjct: 26 KLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAGTSESHKKC 85
Query: 98 QRLEIIQI--TSG-----SRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLP 150
LE+++ T G LD IL GGV TEI G GKTQLC L V Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 151 LDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
GG G+A++ID EG+F R++ +A
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
Score = 130 (50.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R + T+ +++ L + ++ L+IVD +R D +LS R
Sbjct: 203 NILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRT 259
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
L + + LA+ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPAL----GESWGHAATIRLIF 315
Query: 306 RKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
R ++R+ + SP E FQI QG D
Sbjct: 316 HWDR-KQRLATLYKSPSQKECTVLFQIKPQGFRD 348
>UNIPROTKB|E2R3P3 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:AAEX03005799
Ensembl:ENSCAFT00000026122 Uniprot:E2R3P3
Length = 272
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 62 ELLQIKGISEAKVDKII----EAASKLVPLGFTSATQLHAQRLEIIQITSGSRELDKILE 117
EL+++ G+S V +++ A + + + + A L T+ S LD+ L
Sbjct: 37 ELMKMTGLSYKGVHELLCMVSRACAPKMQTAYRIKMETSASLLPAFLATTLSA-LDEALH 95
Query: 118 GGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQI 177
GGV GS+TEI G GKTQ C + + LP + GG EG +YID E F +RL++I
Sbjct: 96 GGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGDVVYIDTESAFSAERLVEI 155
Query: 178 AD----RYGLNGADVLENVAYARAYNTDHQSRLLLEAASM---MVETRFALMIVDSATAL 230
A+ RY +L + Y +L S+ ++ L+I+DS ++
Sbjct: 156 AESRFPRYFNTEEKLLLTSSKVHLYRELSCDAVLQRIESLEEEIISKGVKLVIIDSVASV 215
Query: 231 YRTDFSGR--GELSARQMHLAKFLRSLQKLADEFGVAV 266
R +F + G + R LA+ SL+ LA+EF + V
Sbjct: 216 VRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPV 253
>DICTYBASE|DDB_G0284507 [details] [associations]
symbol:DDB_G0284507 "putative Rad51C protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
dictyBase:DDB_G0284507 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
EMBL:AAFI02000066 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
RefSeq:XP_638535.1 HSSP:Q55075 ProteinModelPortal:Q54PJ7
EnsemblProtists:DDB0232315 GeneID:8624628 KEGG:ddi:DDB_G0284507
InParanoid:Q54PJ7 KO:K10870 OMA:VREMATH Uniprot:Q54PJ7
Length = 381
Score = 223 (83.6 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 71/249 (28%), Positives = 110/249 (44%)
Query: 111 ELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFR 170
E+D++L GG ITEI G GKT + L V +P D GG +GKA+YID EG++
Sbjct: 70 EIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGSYS 129
Query: 171 PQRLLQIADR------------------YGLNGADVLENVAYARAYNTDHQSRLLLEAAS 212
QR+ ++A Y VL ++ Y R Y+ L+ +
Sbjct: 130 CQRVREMATHLVNHLECVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEIISLIHQLPL 189
Query: 213 MMVETR-FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQ 271
+ + + L++VDS T +R DF G R L ++L +A + +AVV+ NQ
Sbjct: 190 FLEKNKDVKLIVVDSITYPFRCDFKDMG---LRTRSLLSLAQNLMNIATRYNLAVVVMNQ 246
Query: 272 VVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQ 331
V ++ + + P G H T R+ L + ++R C + SP F
Sbjct: 247 VTTKISPNQ--KESILVPYLGESWTHICTYRMVLF-WKQKQRFCHLYKSPSFKSCFTPFD 303
Query: 332 ISAQGVADV 340
I G+ DV
Sbjct: 304 IVEYGIRDV 312
>UNIPROTKB|F1MW99 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:DAAA02048323
IPI:IPI00713775 Ensembl:ENSBTAT00000020012 Uniprot:F1MW99
Length = 382
Score = 223 (83.6 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 92/335 (27%), Positives = 146/335 (43%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQI--KGISEAKVDKIIEAASKLVP 86
+L ++G A ++ ++K + L ++ E LQI + K + A S
Sbjct: 27 KLASAGFQTAEELLEVKPSELSKEVGISKEEALETLQIIRRECLTNKTSYSVTAESGRKC 86
Query: 87 LGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVT 146
Q H Q II S LD IL GG+ TEI G GKTQLC L +
Sbjct: 87 TALELLEQEHTQNF-IITFCSA---LDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAID 142
Query: 147 CQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRY--------GLNGAD---------VL 189
Q+P GG EG+A++ID EG+F R++ +A G + + L
Sbjct: 143 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTL 202
Query: 190 ENVA----YARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSAR 244
EN+ Y R + T+ +++ L + + ++ L+IVD +R D +LS R
Sbjct: 203 ENILSHIYYFRCRDYTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLR 259
Query: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLA 304
L + + LA+ +AV++TNQ+ + D + P + G HA+T RL
Sbjct: 260 TRLLNGLAQQMISLANNHRLAVILTNQMTTKFDRNQALLVPAL----GESWGHAATIRLI 315
Query: 305 LRKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
+ + R+ + SP E+ FQI+ QG D
Sbjct: 316 FHWDQKQSRLATLYKSPSQKESTVPFQITPQGFRD 350
>MGI|MGI:2150020 [details] [associations]
symbol:Rad51c "RAD51 homolog C" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048476 "Holliday junction resolvase complex" evidence=IC]
InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:2150020 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007283 EMBL:CH466556 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 GO:GO:0048476
EMBL:AL596130 GeneTree:ENSGT00550000074609 HSSP:O74036 CTD:5889
HOVERGEN:HBG055764 KO:K10870 OMA:QRDLVSF OrthoDB:EOG4CRM09
EMBL:AF324883 EMBL:AK076551 EMBL:CU406989 EMBL:CU406969
EMBL:AL669902 EMBL:BC090648 EMBL:BC141034 IPI:IPI00125672
IPI:IPI00226086 RefSeq:NP_444499.1 UniGene:Mm.37376
ProteinModelPortal:Q924H5 SMR:Q924H5 STRING:Q924H5 PRIDE:Q924H5
Ensembl:ENSMUST00000007790 Ensembl:ENSMUST00000067692 GeneID:114714
KEGG:mmu:114714 UCSC:uc007ktp.2 InParanoid:Q5SX32 NextBio:368733
Bgee:Q924H5 Genevestigator:Q924H5 Uniprot:Q924H5
Length = 366
Score = 148 (57.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 50/150 (33%), Positives = 73/150 (48%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
+L A+G A DV ++K + L ++ E LQI E +K A + +
Sbjct: 17 KLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILR-RECLTNKPRCAGTSVANEK 75
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
T+ L + + IT S LD IL GG+ TE+ G GKTQLC L V Q
Sbjct: 76 CTALELLEQEHTQGFIITFCSA-LDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQ 134
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
+P GG G+A++ID EG+F R++ +A
Sbjct: 135 IPECFGGVAGEAVFIDTEGSFMVDRVVSLA 164
Score = 124 (48.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/154 (25%), Positives = 73/154 (47%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R ++ T+ +++ L + + L+I+D +R D +LS R
Sbjct: 194 NILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLE---DLSLRT 250
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
L + + LA+ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 251 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPAL----GESWGHAATIRLIF 306
Query: 306 RKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
+ ++R + SP E+ FQI+ QG D
Sbjct: 307 HWEQ-KQRFATLYKSPSQKESTIPFQITPQGFRD 339
>UNIPROTKB|F1PMI7 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:AAEX03006577
EMBL:AAEX03006578 EMBL:AAEX03006579 Ensembl:ENSCAFT00000027833
Uniprot:F1PMI7
Length = 368
Score = 146 (56.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 50/150 (33%), Positives = 73/150 (48%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
+L ++G A ++ ++K L ++ E LQI E +K AA+
Sbjct: 19 KLVSAGFQTAEELLEVKPCELSKEVGISKEEALETLQIIR-RECLTNKPRYAATAESGKK 77
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
T+ L + + IT S LD IL GG+ TEI G GKTQLC L V Q
Sbjct: 78 CTALELLEQEHTQSFIITFCSA-LDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVDVQ 136
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
+P GG EG+A++ID EG+F R++ +A
Sbjct: 137 IPECFGGVEGEAVFIDTEGSFMVDRVVDLA 166
Score = 126 (49.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R + T+ +++ L + ++ L+IVD +R D +LS R
Sbjct: 196 NILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRT 252
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
L + + LA+ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 253 RLLNGLAQQMISLANNHRLAVLLTNQMTTKIDRNQALLVPAL----GESWGHAATIRLIF 308
Query: 306 RKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
+ ++R+ + SP E+ FQI+ QG D
Sbjct: 309 HWDQ-KQRLATLYKSPSQKESTVLFQITPQGFRD 341
>RGD|1563765 [details] [associations]
symbol:Rad51c "Rad51 homolog c (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IEA;ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA;ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 CTD:5889 KO:K10870
OMA:QRDLVSF RefSeq:NP_001123249.1 UniGene:Rn.160309
Ensembl:ENSRNOT00000008846 GeneID:497976 KEGG:rno:497976
NextBio:698267 Uniprot:G3V6U0
Length = 366
Score = 149 (57.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 50/150 (33%), Positives = 73/150 (48%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
+L A+G A DV ++K + L ++ E LQI E +K A + +
Sbjct: 17 KLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILR-RECLTNKPRCAGTSVANKK 75
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
T+ L + + IT S LD IL GG+ TE+ G GKTQLC L V Q
Sbjct: 76 CTALELLEQEHTQGFIITFCSA-LDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQ 134
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
+P GG G+A++ID EG+F R++ +A
Sbjct: 135 IPECFGGVAGEAVFIDTEGSFMVDRVVSLA 164
Score = 122 (48.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R ++ T+ +++ L + ++ L+I+D +R D +L R
Sbjct: 194 NILSHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLD---DLFLRT 250
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
L + L LA++ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 251 RLLNGLAQQLISLANKHRLAVILTNQMTTKIDKNQASLVPAL----GESWGHAATIRLIF 306
Query: 306 RKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
+ ++R + SP E+ FQI+ QG D
Sbjct: 307 HWEQ-KQRFATLYKSPSQKESTVPFQITPQGFRD 339
>RGD|1560681 [details] [associations]
symbol:Rad51b "RAD51 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1560681
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
OrthoDB:EOG4G4GQP IPI:IPI00367665 Ensembl:ENSRNOT00000016459
UCSC:RGD:1560681 Uniprot:D4A4Y7
Length = 258
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 65/217 (29%), Positives = 102/217 (47%)
Query: 62 ELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHAQR---LEIIQITSGSRELDKILEG 118
EL+++ G+S V +++ SK +A +L +R L +++ LD+ L G
Sbjct: 37 ELMKVTGLSYRGVHELLHTVSKACAPQMQTAYELKTRRSAHLSPAFLSTTLGALDEALHG 96
Query: 119 GVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
GV GS+TE+ G GKTQ C + V LP GG EG +YID E F +RL++IA
Sbjct: 97 GVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYIDTESAFTAERLVEIA 156
Query: 179 D-RYG--LNGADVL----ENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALY 231
+ R+ N + L V + + + L ++ L+IVDS ++
Sbjct: 157 ESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEEEIISKGVKLVIVDSIASVV 216
Query: 232 RTDFSGR--GELSARQMHLAKFLRSLQKLADEFGVAV 266
R +F + G + R L K L+ L+ EF V V
Sbjct: 217 RKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPV 253
>UNIPROTKB|J3QKK3 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AC025521 EMBL:AC011195
HGNC:HGNC:9820 ProteinModelPortal:J3QKK3 Ensembl:ENST00000583539
Uniprot:J3QKK3
Length = 346
Score = 149 (57.5 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 51/148 (34%), Positives = 70/148 (47%)
Query: 43 KLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKII-----EAASKLVPLGFTSATQLHA 97
KL AG T E + EL + GIS+A+ + + E + TS +
Sbjct: 26 KLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAGTSESHKKC 85
Query: 98 QRLEIIQI--TSG-----SRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLP 150
LE+++ T G LD IL GGV TEI G GKTQLC L V Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 151 LDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
GG G+A++ID EG+F R++ +A
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
Score = 116 (45.9 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 38/147 (25%), Positives = 69/147 (46%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R + T+ +++ L + ++ L+IVD +R D +LS R
Sbjct: 203 NILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRT 259
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
L + + LA+ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPAL----GESWGHAATIRLIF 315
Query: 306 RKGRGEERICKVISSPCLAEAEARFQI 332
R ++R+ + SP E FQI
Sbjct: 316 HWDR-KQRLATLYKSPSQKECTVLFQI 341
>ZFIN|ZDB-GENE-050320-116 [details] [associations]
symbol:xrcc3 "X-ray repair complementing defective
repair in Chinese hamster cells 3" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 ZFIN:ZDB-GENE-050320-116
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:BX255905
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOVERGEN:HBG054179
OMA:INQVTEA IPI:IPI00494088 UniGene:Dr.75660
Ensembl:ENSDART00000010564 InParanoid:Q5TZD9 Uniprot:Q5TZD9
Length = 352
Score = 215 (80.7 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 75/274 (27%), Positives = 127/274 (46%)
Query: 62 ELLQIKGISEAKVDKIIEAASKLVPLGF-TSATQLHAQRLEIIQ----ITSGSRELDKIL 116
+L ++ +S+A V ++ +A + V +A QL +++ ++ LD ++
Sbjct: 34 DLQRLTRLSKADVQRLHQAVAASVRKSKPVTALQLIQGECPVLEPGHRLSFACPVLDGLM 93
Query: 117 EGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQ 176
GG+ ITE+ GE +GKTQ C LC++ Q P + GG A+YI E +F +RL Q
Sbjct: 94 RGGLPLRGITELAGESAAGKTQFCLQLCLSVQYPQEHGGLNSGAVYICTEDSFPIKRLRQ 153
Query: 177 IADRYGLNGADV----LENVAYARAYNTDHQSRLLLEAASMMVETRFA---------LMI 223
+ + D+ + ++ ++ +H + L EA + V R L++
Sbjct: 154 LITQQPRLRPDLPPALIHSLRFSDNIYIEHAADL--EALQVCVSQRVPVLLKRGLVRLLV 211
Query: 224 VDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAI-- 281
VDS AL+R++F E R HL F +L +L+ + V+ NQV VDG
Sbjct: 212 VDSVAALFRSEFQA-DEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQVTDVVDGPNPGR 270
Query: 282 ----FAGPQIKPIGGNIMAHASTTRLALRKGRGE 311
G ++ P G A+ RL LR+ G+
Sbjct: 271 CDYGLVGSKVLPALGIAWANQVMVRLMLRRLAGQ 304
>UNIPROTKB|Q5ZM26 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162 KO:K10880
CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AADN02003784 EMBL:AJ719558 IPI:IPI00684938
RefSeq:NP_001006489.1 UniGene:Gga.3684 STRING:Q5ZM26
Ensembl:ENSGALT00000032496 GeneID:423485 KEGG:gga:423485
InParanoid:Q5ZM26 NextBio:20825955 Uniprot:Q5ZM26
Length = 347
Score = 214 (80.4 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 68/256 (26%), Positives = 126/256 (49%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG-FTSATQLHAQR 99
+ LK A + +++ V +L ++ +S A V+ +++ S+ + +A QL+ +
Sbjct: 13 IAALKKADIKSIKEVLNLSGADLQRLMKLSSADVECLLKTVSRALRKNCMLTALQLYQDK 72
Query: 100 ----LEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG 155
+ +++ G LD +L+GG+ ITE+ GE +GKTQ+ LC+ Q P GG
Sbjct: 73 DCFSSQCQKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYRYGG 132
Query: 156 GEGKAMYIDAEGTFRPQRLLQ-IADRYGLNG---ADVLENVAYARAYNTDHQSRL----- 206
E A+YI E F +RL Q IA ++ L ++++ + + + +H + L
Sbjct: 133 LESGAVYICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHN 192
Query: 207 -LLEAASMMVETR--FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 263
+ + S+++ TR L+++DS AL+R +F G + + +L F L L+ F
Sbjct: 193 CITKRLSLLL-TRGMVRLVVIDSIAALFRCEF-GASDSVLKARYLQTFGAQLHGLSTRFR 250
Query: 264 VAVVITNQVVAQVDGS 279
++ NQV V S
Sbjct: 251 TPIMCINQVTDAVSES 266
>UNIPROTKB|F1M525 [details] [associations]
symbol:Rad51c "Protein Rad51c" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 IPI:IPI00951574 Ensembl:ENSRNOT00000065976
ArrayExpress:F1M525 Uniprot:F1M525
Length = 336
Score = 136 (52.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 36/85 (42%), Positives = 46/85 (54%)
Query: 94 QLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQ 153
Q H Q II S LD IL GG+ TE+ G GKTQLC L V Q+P
Sbjct: 54 QEHTQGF-IITFCSA---LDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECF 109
Query: 154 GGGEGKAMYIDAEGTFRPQRLLQIA 178
GG G+A++ID EG+F R++ +A
Sbjct: 110 GGVAGEAVFIDTEGSFMVDRVVSLA 134
Score = 122 (48.0 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R ++ T+ +++ L + ++ L+I+D +R D +L R
Sbjct: 164 NILSHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLD---DLFLRT 220
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
L + L LA++ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 221 RLLNGLAQQLISLANKHRLAVILTNQMTTKIDKNQASLVPAL----GESWGHAATIRLIF 276
Query: 306 RKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
+ ++R + SP E+ FQI+ QG D
Sbjct: 277 HWEQ-KQRFATLYKSPSQKESTVPFQITPQGFRD 309
>DICTYBASE|DDB_G0283637 [details] [associations]
symbol:xrcc3 "putative DNA repair protein XRCC3"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0283637 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0003677
GO:GO:0006310 GO:GO:0006302 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 RefSeq:XP_638929.1
ProteinModelPortal:Q54QU4 EnsemblProtists:DDB0232275 GeneID:8624168
KEGG:ddi:DDB_G0283637 InParanoid:Q54QU4 Uniprot:Q54QU4
Length = 564
Score = 168 (64.2 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 93 TQLHAQRLEI--IQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLP 150
T L ++L+I I++++G + +DK L GG+ ITEI GE SGKTQLC L + QLP
Sbjct: 153 TSLELEKLQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQLP 212
Query: 151 LDQGGGEGKAMYIDAEGTFRPQRLLQI 177
+ GG G +YI E F +RL Q+
Sbjct: 213 FEMGGLNGACLYITTEPPFPTKRLNQM 239
Score = 90 (36.7 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 24/103 (23%), Positives = 48/103 (46%)
Query: 172 QRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR-FALMIVDSATAL 230
Q+ Q + +G L+N+ D LL+ + +E + L+I+DS AL
Sbjct: 264 QQQQQYYSKLSNSGVSPLDNIFIQSTTTIDSLMDLLINQITGYLEKKTIRLLIIDSIAAL 323
Query: 231 YRTDFSG-RGELSARQMHLAKFLRSLQKLADEFGVAVVITNQV 272
R ++ + E+ + L L+ + +++G+ +V+ NQV
Sbjct: 324 LRHEYGNEKSEIIEKTKLLWSLANRLKLINEQYGITIVVVNQV 366
>UNIPROTKB|H7C1R0 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C1R0 Ensembl:ENST00000413590 Uniprot:H7C1R0
Length = 257
Score = 190 (71.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 67/235 (28%), Positives = 105/235 (44%)
Query: 127 EIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD------- 179
EI G GKTQLC L V Q+P GG G+A++ID EG+F R++ +A
Sbjct: 2 EICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ 61
Query: 180 -----------RYGLNGA---DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIV 224
R L ++L ++ Y R + T+ +++ L + ++ L+IV
Sbjct: 62 LIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIV 121
Query: 225 DSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAG 284
D +R D +LS R L + + LA+ +AV++TNQ+ ++D +
Sbjct: 122 DGIAFPFRHDLD---DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLV 178
Query: 285 PQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQISAQGVAD 339
P + G HA+T RL R + R+ + SP E FQI QG D
Sbjct: 179 PAL----GESWGHAATIRLIFHWDRKQSRLATLYKSPSQKECTVLFQIKPQGFRD 229
>UNIPROTKB|E2RAE7 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 KO:K10880 CTD:7517 OMA:INQVTEA
EMBL:AAEX03006057 RefSeq:XP_003435154.1 Ensembl:ENSCAFT00000029054
GeneID:100687200 KEGG:cfa:100687200 Uniprot:E2RAE7
Length = 349
Score = 204 (76.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 73/248 (29%), Positives = 118/248 (47%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS-KLVPLGFTSATQL--HA 97
+ +K A L +++ V + +L ++ +S V ++ AAS +L G +A QL A
Sbjct: 13 IAAVKKAKLKSIKEVLHFSGPDLQRLTSLSSLDVQHLLRAASSRLRGGGVLTALQLCERA 72
Query: 98 QRLEII--QITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG 155
L +++ G LD++L GG+ +TE+ G +GKTQL LC+ Q P GG
Sbjct: 73 GGLPARPQRLSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFPPRHGG 132
Query: 156 GEGKAMYIDAEGTFRPQRLLQ-IADRYGLNG---ADVLENVAYARAYNTDHQSRL--LLE 209
+ AMYI E F RL Q IA + L +V+ + ++ +H + + LLE
Sbjct: 133 LDAGAMYICTEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEHVADVDSLLE 192
Query: 210 AASMMVETRFA-----LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGV 264
V + L+++DS A +R +F G L R HL +L++L+ F
Sbjct: 193 CVREKVPVLLSRGMARLVVIDSVAAPFRCEFDGPA-LVPRARHLQALGAALRRLSCAFQS 251
Query: 265 AVVITNQV 272
V+ NQV
Sbjct: 252 PVLCINQV 259
>UNIPROTKB|Q2HJ51 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 EMBL:BC113309 IPI:IPI00716231 RefSeq:NP_001039769.1
UniGene:Bt.59591 ProteinModelPortal:Q2HJ51 STRING:Q2HJ51
Ensembl:ENSBTAT00000025404 GeneID:529507 KEGG:bta:529507 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 InParanoid:Q2HJ51
OMA:QARTQDE OrthoDB:EOG4K0QP3 NextBio:20875047 Uniprot:Q2HJ51
Length = 326
Score = 202 (76.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 80/278 (28%), Positives = 128/278 (46%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTSATQLHA 97
V+ L+ G+ TV + + +E+ Q G+S +A V +++ A P F A
Sbjct: 17 VQLLQSRGIKTVVDLVCADLEEVAQKCGLSYKALVALRRVLLAQFSAFP--FNGADLYEE 74
Query: 98 QRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGE 157
+ +++G LDK+L+ G+ TG +TEI G SGKTQ+C LCV + G +
Sbjct: 75 LKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGAPGSGKTQVC--LCVAAHVA---HGLQ 129
Query: 158 GKAMYIDAEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLLLE---AA 211
+YID+ G R+LQ+ + A L+ + RA++ +L + A
Sbjct: 130 QNVLYIDSNGGLTASRILQLLQARTPDEEEQAGALQRIQVVRAFDIFQMLDVLQDLRGAV 189
Query: 212 SMMVETR---FALMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLADEFGVAVV 267
S V + +++VDS A+ G+ E A M LA R L+ LA + VAV+
Sbjct: 190 SQQVSSSSGTLKVVVVDSVAAVVAPLLGGQQREGLALMMQLA---RELKTLARDLSVAVL 246
Query: 268 ITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
+TN + D Q+KP G + +TRL L
Sbjct: 247 VTNHMTRDRDSG------QLKPALGRSWSFVPSTRLLL 278
>MGI|MGI:1261809 [details] [associations]
symbol:Rad51d "RAD51 homolog D" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1261809 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K10871 CTD:5892 HOGENOM:HOG000049134
HOVERGEN:HBG057455 OMA:QARTQDE OrthoDB:EOG4K0QP3 EMBL:AB007040
EMBL:AF034955 EMBL:Y15570 EMBL:AK017835 EMBL:BC049136
IPI:IPI00116701 RefSeq:NP_035365.1 UniGene:Mm.9286
ProteinModelPortal:O55230 SMR:O55230 MINT:MINT-415416 STRING:O55230
PhosphoSite:O55230 PRIDE:O55230 Ensembl:ENSMUST00000018985
GeneID:19364 KEGG:mmu:19364 InParanoid:O55230 NextBio:296433
Bgee:O55230 CleanEx:MM_RAD51L3 Genevestigator:O55230
GermOnline:ENSMUSG00000018841 Uniprot:O55230
Length = 329
Score = 202 (76.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 85/319 (26%), Positives = 141/319 (44%)
Query: 35 GIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTS 91
G+ V+ L+ + TV +A + +E+ Q G+S +A V +++ A PL
Sbjct: 11 GLTEETVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLN--G 68
Query: 92 ATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPL 151
A + +++G LDK+L+ G+ TG +TEI G SGKTQ+C LCV +
Sbjct: 69 ADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCVAANVAH 126
Query: 152 DQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLLL 208
+ +Y+D+ G RLLQ+ + A L+ + R+++ +L
Sbjct: 127 SL---QQNVLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVRSFDIFRMLDMLQ 183
Query: 209 EAASMMVETRFA------LMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLADE 261
+ + + ++IVDS TA+ G+ E A M LA R L+ LA +
Sbjct: 184 DLRGTIAQQEATSSGAVKVVIVDSVTAVVAPLLGGQQREGLALMMQLA---RELKILARD 240
Query: 262 FGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSP 321
GVAVV+TN + DG + KP G + +TR+ L G + +
Sbjct: 241 LGVAVVVTNHLTRDWDGR------RFKPALGRSWSFVPSTRILLDVTEGAGTLGSSQRTV 294
Query: 322 CLAEAEARFQISAQGVADV 340
CL ++ R Q + D+
Sbjct: 295 CLTKSP-RQPTGLQEMIDI 312
>UNIPROTKB|E2RP02 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 CTD:5892 OMA:QARTQDE EMBL:AAEX03006625 RefSeq:XP_548263.2
Ensembl:ENSCAFT00000029092 GeneID:491143 KEGG:cfa:491143
NextBio:20864025 Uniprot:E2RP02
Length = 328
Score = 201 (75.8 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 87/320 (27%), Positives = 145/320 (45%)
Query: 35 GIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTS 91
G+ V +L+ G+ TV +A + + + Q G+S +A V +++ A P ++
Sbjct: 11 GLTQDTVLQLRSRGVRTVVDLASADLEAVAQTCGLSYKALVALRRVLLAQFSAFP---SN 67
Query: 92 ATQLHAQ-RLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLP 150
L+ + + +++G LDK+L+ G+ TG +TEI G SGKTQ+C LCV +
Sbjct: 68 GADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCVAANVA 125
Query: 151 LDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLL 207
G + +YID+ G R+LQ+ + A L+ + RA++ +L
Sbjct: 126 Y---GLQQNVVYIDSNGGLTASRILQLLQARTPDEEVQAGALQRIQVVRAFDIFQMLDVL 182
Query: 208 LEAA---SMMVETRFA---LMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLAD 260
+ S V + ++IVDS TA+ G+ E A M LA R L+ LA
Sbjct: 183 QDCRGTLSQQVSSASGTVKVVIVDSVTAVVSPLLGGQQREGLALMMQLA---RELKTLAR 239
Query: 261 EFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISS 320
+ G+AVV+TN + D ++KP G + +TR+ L G R
Sbjct: 240 DLGMAVVVTNHMTRDRDSG------ELKPALGRSWSFVPSTRILLDIDEGA-RASGSWRR 292
Query: 321 PCLAEAEARFQISAQGVADV 340
CL ++ R Q + D+
Sbjct: 293 ACLTKSP-RLPTGFQEMVDI 311
>UNIPROTKB|F1S262 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004504 InterPro:IPR020588 PRINTS:PR01874
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:FP102481 Ensembl:ENSSSCT00000019210 Uniprot:F1S262
Length = 321
Score = 154 (59.3 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 39/90 (43%), Positives = 51/90 (56%)
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
+T+ L + + IT S LD IL GGV ITEI G GKTQLC L V Q
Sbjct: 76 YTALELLEQEHTQSFIITFCSA-LDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVDVQ 134
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
+P GG EG+A++ID EG+F R++ +A
Sbjct: 135 IPECFGGVEGEAVFIDTEGSFMVNRVVDLA 164
Score = 88 (36.0 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 29/118 (24%), Positives = 57/118 (48%)
Query: 187 DVLENVAYARAYN-TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 245
++L ++ Y R + T+ +++ L + ++ L+IVD +R + +LS R
Sbjct: 194 NILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHELD---DLSLRT 250
Query: 246 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRL 303
L + + LA+ +AV++TNQ+ ++D + P + G HA+T RL
Sbjct: 251 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNEALLVPAL----GESWGHAATIRL 304
>ASPGD|ASPL0000051939 [details] [associations]
symbol:AN10145 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0033062 "Rhp55-Rhp57 complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0030491 "heteroduplex formation" evidence=IEA] [GO:0000707
"meiotic DNA recombinase assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 ProteinModelPortal:C8VTV7
EnsemblFungi:CADANIAT00001591 OMA:ILSINAM Uniprot:C8VTV7
Length = 554
Score = 203 (76.5 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 58/178 (32%), Positives = 86/178 (48%)
Query: 112 LDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRP 171
LD +L GG+ TG +TE+ GE SGKTQ L + QLP QG G A+YI E
Sbjct: 112 LDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGAGRS-AIYISTEAPLAT 170
Query: 172 QRLLQIADRY------GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVET-RFALMIV 224
RL Q+ + + A L + A + + Q +L + ++ L+++
Sbjct: 171 NRLSQLIECHPYLSTLSREQAPSLGRILSINAMDLESQDHILNYQLPVAIKRYNVGLVVI 230
Query: 225 DSATALYRTDFSGR--GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA 280
DS T+ YR + + LS R LAK + L+ LA VA+V+ NQV + +G A
Sbjct: 231 DSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDRFEGDA 288
>UNIPROTKB|E9PI54 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR010995
InterPro:IPR011941 SMART:SM00278 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51
IPI:IPI00982914 ProteinModelPortal:E9PI54 SMR:E9PI54
Ensembl:ENST00000531277 ArrayExpress:E9PI54 Bgee:E9PI54
Uniprot:E9PI54
Length = 100
Score = 178 (67.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKII 78
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
>UNIPROTKB|Q9NZG9 [details] [associations]
symbol:RAD51 "RAD51" species:9606 "Homo sapiens"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR010995 InterPro:IPR011941 GO:GO:0005524 GO:GO:0007126
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
EMBL:AC022405 GO:GO:0008094 EMBL:AC012476 HOGENOM:HOG000227426
PANTHER:PTHR22942:SF12 UniGene:Hs.631709 HGNC:HGNC:9817
ChiTaRS:RAD51 HSSP:Q06609 EMBL:AF203691 IPI:IPI01018851 SMR:Q9NZG9
STRING:Q9NZG9 Ensembl:ENST00000526763 Uniprot:Q9NZG9
Length = 75
Score = 178 (67.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 24 GPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKII 78
GP P+ +L+ GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+
Sbjct: 21 GPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
>FB|FBgn0003480 [details] [associations]
symbol:spn-B "spindle B" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IGI] [GO:0009949 "polarity
specification of anterior/posterior axis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;TAS] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0006281 "DNA
repair" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0007126 "meiosis"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
EMBL:AE014297 GO:GO:0005524 GO:GO:0009949 GO:GO:0007294
GO:GO:0006417 GO:GO:0003677 GO:GO:0006200 GO:GO:0006302
GO:GO:0030261 GO:GO:0008298 GO:GO:0030717 GO:GO:0007131
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HSSP:O74036
GO:GO:0009951 KO:K10880 OMA:YSPETPN EMBL:AF069531 EMBL:BT044133
EMBL:FJ219434 EMBL:FJ219442 EMBL:FJ219445 EMBL:FJ219448
RefSeq:NP_476740.1 UniGene:Dm.4725 SMR:O77135 IntAct:O77135
MINT:MINT-763026 STRING:O77135 EnsemblMetazoa:FBtr0082933
GeneID:41746 KEGG:dme:Dmel_CG3325 UCSC:CG3325-RA CTD:41746
FlyBase:FBgn0003480 HOGENOM:HOG000012350 InParanoid:O77135
OrthoDB:EOG49CNQT GenomeRNAi:41746 NextBio:825371 Uniprot:O77135
Length = 341
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 75/254 (29%), Positives = 120/254 (47%)
Query: 104 QITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG-GEGKAMY 162
+++ G LD+ GGV T ITE+ G GKTQL L + QLP + GG G+G A Y
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVA-Y 145
Query: 163 IDAEGTFRPQRLLQIAD----RYGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR 218
I E +F +RLLQ++ R+ + L N+ + ++ +++
Sbjct: 146 ICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQH 205
Query: 219 -FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVD 277
L+I+DS A++R + R H+ + +L AD++ AVV NQV + D
Sbjct: 206 GIGLIIIDSVAAIFRL----YNDYLERARHMRRLADALLSYADKYNCAVVCVNQVATR-D 260
Query: 278 GSAIFAGPQIKPIGGNIMAHASTTRLAL----RKGR-GEERIC----KVISSPCLAEAEA 328
G +I P G AH TRL + ++ R G++ I +++ SP A
Sbjct: 261 GQ-----DEI-PCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFA 314
Query: 329 RFQISAQGVADVKD 342
F I+A+GV +V +
Sbjct: 315 EFLITAEGVVNVPE 328
>UNIPROTKB|E1BRQ1 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 EMBL:AADN02025794 IPI:IPI00602048
ProteinModelPortal:E1BRQ1 Ensembl:ENSGALT00000008107 Uniprot:E1BRQ1
Length = 369
Score = 194 (73.4 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 93/337 (27%), Positives = 141/337 (41%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
+L A+G A ++ + GL ++ E LQ+ E D A
Sbjct: 17 RLLAAGFQTAQELLETGPCGLSKEIGISREEALEALQVVR-QECAGDAAKTAGGSGSTRK 75
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
T+ L ++ + IT S LD IL GGV+ ITEI G GKTQLC L V Q
Sbjct: 76 CTALELLEEEQTQGFIITFCSA-LDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQ 134
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD---RY------------GLNGAD------ 187
+P GG G+A++ID EG+F R IA R+ L +
Sbjct: 135 IPECFGGVAGEAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQEEDHLQALETFSLES 194
Query: 188 VLENVAYARAYNTDH---QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSAR 244
+L ++ Y R + Q LL + S + L+++D +R DF +LS R
Sbjct: 195 ILSHIYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDFE---DLSLR 251
Query: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLA 304
L + L +A++ AVV+TNQ+ + + P + G HA+T RL
Sbjct: 252 TRLLNGLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSMLVPAL----GESWGHAATVRLI 307
Query: 305 LRKGRGEERICKVISSPCLAEAEARFQISAQGVADVK 341
+R+ + SP E+ + I+ QG DV+
Sbjct: 308 FHWDN-TQRLATLYKSPSQKESTIPYNITPQGFRDVQ 343
Score = 151 (58.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 54/160 (33%), Positives = 74/160 (46%)
Query: 24 GPFPVEQ-LQASGIAA--LDVKKLKDAGLCTVESVAYSPRKELLQIKGI--SEAKVDKII 78
G P+ L+A +AA ++L + G C + R+E L+ + E D
Sbjct: 6 GSLPLSPALRARLLAAGFQTAQELLETGPCGLSKEIGISREEALEALQVVRQECAGDAAK 65
Query: 79 EAASKLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQ 138
A T+ L ++ + IT S LD IL GGV+ ITEI G GKTQ
Sbjct: 66 TAGGSGSTRKCTALELLEEEQTQGFIITFCSA-LDNILGGGVQLTKITEICGAPGVGKTQ 124
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
LC L V Q+P GG G+A++ID EG+F R IA
Sbjct: 125 LCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRAADIA 164
>UNIPROTKB|F1NUE9 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007066 "female meiosis sister chromatid
cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007131 GO:GO:0007141 GO:GO:0008821
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0007066 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:AADN02025794 IPI:IPI00820436
Ensembl:ENSGALT00000039328 Uniprot:F1NUE9
Length = 373
Score = 194 (73.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 93/337 (27%), Positives = 141/337 (41%)
Query: 30 QLQASGI-AALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLG 88
+L A+G A ++ + GL ++ E LQ+ E D A
Sbjct: 22 RLLAAGFQTAQELLETGPCGLSKEIGISREEALEALQVVR-QECAGDAAKTAGGSGSTRK 80
Query: 89 FTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQ 148
T+ L ++ + IT S LD IL GGV+ ITEI G GKTQLC L V Q
Sbjct: 81 CTALELLEEEQTQGFIITFCSA-LDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQ 139
Query: 149 LPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD---RY------------GLNGAD------ 187
+P GG G+A++ID EG+F R IA R+ L +
Sbjct: 140 IPECFGGVAGEAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQEEDHLQALETFSLES 199
Query: 188 VLENVAYARAYNTDH---QSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSAR 244
+L ++ Y R + Q LL + S + L+++D +R DF +LS R
Sbjct: 200 ILSHIYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDFE---DLSLR 256
Query: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLA 304
L + L +A++ AVV+TNQ+ + + P + G HA+T RL
Sbjct: 257 TRLLNGLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSMLVPAL----GESWGHAATVRLI 312
Query: 305 LRKGRGEERICKVISSPCLAEAEARFQISAQGVADVK 341
+R+ + SP E+ + I+ QG DV+
Sbjct: 313 FHWDN-TQRLATLYKSPSQKESTIPYNITPQGFRDVQ 348
Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 54/160 (33%), Positives = 74/160 (46%)
Query: 24 GPFPVEQ-LQASGIAA--LDVKKLKDAGLCTVESVAYSPRKELLQIKGI--SEAKVDKII 78
G P+ L+A +AA ++L + G C + R+E L+ + E D
Sbjct: 11 GSLPLSPALRARLLAAGFQTAQELLETGPCGLSKEIGISREEALEALQVVRQECAGDAAK 70
Query: 79 EAASKLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQ 138
A T+ L ++ + IT S LD IL GGV+ ITEI G GKTQ
Sbjct: 71 TAGGSGSTRKCTALELLEEEQTQGFIITFCSA-LDNILGGGVQLTKITEICGAPGVGKTQ 129
Query: 139 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
LC L V Q+P GG G+A++ID EG+F R IA
Sbjct: 130 LCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRAADIA 169
>ZFIN|ZDB-GENE-040426-2490 [details] [associations]
symbol:rad51d "RAD51 homolog D (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
ZFIN:ZDB-GENE-040426-2490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OrthoDB:EOG4K0QP3
EMBL:BC066407 IPI:IPI00512042 RefSeq:NP_996959.1 UniGene:Dr.19061
ProteinModelPortal:Q6NYZ3 STRING:Q6NYZ3 PRIDE:Q6NYZ3 GeneID:404608
KEGG:dre:404608 InParanoid:Q6NYZ3 NextBio:20817676
ArrayExpress:Q6NYZ3 Bgee:Q6NYZ3 Uniprot:Q6NYZ3
Length = 327
Score = 192 (72.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 85/288 (29%), Positives = 134/288 (46%)
Query: 41 VKKLKDAGLCTVES-VAYSPRKELLQIKGISE---AKVDKIIEAASKLVPLGFTSATQLH 96
+K L+ + TVE V+++P +EL Q +S V +++ A P+ S L+
Sbjct: 17 IKALQTEDIRTVEDFVSWNP-EELAQKCSLSYKALVAVRRVLLAQYTAYPI---SGADLY 72
Query: 97 AQRLEIIQITS-GSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG 155
+ L I S GS LDK+L+ G+ TG ITE+ G SGKTQ+C ++ V L Q
Sbjct: 73 EELLSSTAILSTGSPSLDKLLDSGLYTGEITELTGSPGSGKTQVCFSVAVNISHQLKQ-- 130
Query: 156 GEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLL-------- 207
+YID +G RLLQ+ N + +E + + + LL
Sbjct: 131 ---TVVYIDTKGGMCANRLLQMLQTKTPNEQEQMEALQKIKVFRVFDVFSLLACLQNLRS 187
Query: 208 --LEAASMMVETRFALMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGV 264
L+ S+ + ALM VDS +A+ G+ E + M +A L+ +A +F +
Sbjct: 188 TGLQKMSVGGGSVKALM-VDSVSAVLSPILGGKQNEGMSLLMQVAG---ELKMIAKDFNI 243
Query: 265 AVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEE 312
AV++TN V DG+ Q+K G +H TR+ L++ EE
Sbjct: 244 AVLVTNHVTK--DGNG-----QVKAGLGLSWSHVPRTRVLLQRVENEE 284
>RGD|1306849 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306849
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0010033 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OrthoDB:EOG47D9GS
IPI:IPI00368372 Ensembl:ENSRNOT00000016208 UCSC:RGD:2325124
Uniprot:D4A5N4
Length = 349
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 71/252 (28%), Positives = 115/252 (45%)
Query: 44 LKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHA-QRLEI 102
+K L +V+ V +L ++ + V ++ AA+ L G T LH Q+ E
Sbjct: 16 IKRGRLKSVKEVLCYSGPDLQRLTSLPSHDVQLLLRAAA-LHLRGSRVLTALHLFQQRES 74
Query: 103 I-----QITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGE 157
+++ G LD+ L GG+ IT + G +GKTQL LC+ Q P GG E
Sbjct: 75 FPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLAVQFPRQYGGLE 134
Query: 158 GKAMYIDAEGTFRPQRLLQIAD-----RYGLNGADVLENVAYARAYNTDHQSRL--LLEA 210
A+YI E F +RL Q+ + R + G +V + + + +H + + L+E
Sbjct: 135 AGAVYICTEDAFPSKRLWQLIEQLQELRTDVPG-EVTQKIRFGNHIFIEHAADVDTLMEC 193
Query: 211 ASMMVETRFA-----LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVA 265
S V + L++VDS A +R +F + + R HL +LQ+L+ F
Sbjct: 194 VSKRVPILLSRGMARLVVVDSIAAPFRCEFHLQAS-AVRAKHLHSLGAALQRLSSTFRSP 252
Query: 266 VVITNQVVAQVD 277
V+ NQV V+
Sbjct: 253 VLCINQVTEMVE 264
>UNIPROTKB|O75771 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 EMBL:CH471147
GO:GO:0007131 Orphanet:145 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 EMBL:AC022916 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OMA:QARTQDE
OrthoDB:EOG4K0QP3 EMBL:Y15572 EMBL:AF034956 EMBL:AB013341
EMBL:AB016223 EMBL:AB016224 EMBL:AB016225 EMBL:AB018360
EMBL:AB018361 EMBL:AB018362 EMBL:AB018363 EMBL:AB020412
EMBL:AY623116 EMBL:AK296241 EMBL:BC014422 EMBL:AL117459
IPI:IPI00216381 IPI:IPI00216382 IPI:IPI00216383 IPI:IPI00216384
IPI:IPI00216386 IPI:IPI00291454 IPI:IPI00411326 IPI:IPI00791891
PIR:T17247 RefSeq:NP_001136043.1 RefSeq:NP_002869.3
RefSeq:NP_598332.1 UniGene:Hs.631757 PDB:2KZ3 PDBsum:2KZ3
ProteinModelPortal:O75771 SMR:O75771 DIP:DIP-24265N IntAct:O75771
MINT:MINT-127795 STRING:O75771 PhosphoSite:O75771 PRIDE:O75771
DNASU:5892 Ensembl:ENST00000335858 Ensembl:ENST00000345365
Ensembl:ENST00000357906 Ensembl:ENST00000360276
Ensembl:ENST00000394589 GeneID:5892 KEGG:hsa:5892 UCSC:uc002hir.2
UCSC:uc002his.2 GeneCards:GC17M033427 HGNC:HGNC:9823 MIM:602954
MIM:614291 neXtProt:NX_O75771 PharmGKB:PA34179 PhylomeDB:O75771
GenomeRNAi:5892 NextBio:22920 ArrayExpress:O75771 Bgee:O75771
Genevestigator:O75771 GermOnline:ENSG00000185379 Uniprot:O75771
Length = 328
Score = 185 (70.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 74/284 (26%), Positives = 128/284 (45%)
Query: 35 GIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTS 91
G+ ++ L+ + TV + + +E+ Q G+S +A V +++ A P+
Sbjct: 11 GLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVN--G 68
Query: 92 ATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPL 151
A + +++G LDK+L+ G+ TG +TEI G SGKTQ+C LC+ +
Sbjct: 69 ADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCMAANVA- 125
Query: 152 DQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLLL 208
G + +Y+D+ G RLLQ+ + A+ L + A++ +L
Sbjct: 126 --HGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQ 183
Query: 209 EAASMMVET------RFALMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLADE 261
E + + +++VDS TA+ G+ E A M LA R L+ LA +
Sbjct: 184 ELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLA---RELKTLARD 240
Query: 262 FGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL 305
G+AVV+TN + D ++KP G + +TR+ L
Sbjct: 241 LGMAVVVTNHITRDRDSG------RLKPALGRSWSFVPSTRILL 278
>POMBASE|SPAC20H4.07 [details] [associations]
symbol:rad57 "RecA family ATPase Rad57/Rhp57"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000730 "DNA recombinase assembly" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0033062 "Rhp55-Rhp57 complex" evidence=NAS]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042148 "strand invasion" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR020588
PROSITE:PS50162 PomBase:SPAC20H4.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0007131
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000730 GO:GO:0033170 GO:GO:0042148
GO:GO:0033062 EMBL:AB024744 PIR:T43507 RefSeq:NP_593627.1
ProteinModelPortal:Q9UUL2 IntAct:Q9UUL2 STRING:Q9UUL2
EnsemblFungi:SPAC20H4.07.1 GeneID:2542007 KEGG:spo:SPAC20H4.07
KO:K10958 OMA:LERRTHC OrthoDB:EOG4HTD1G NextBio:20803087
Uniprot:Q9UUL2
Length = 354
Score = 185 (70.2 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 60/203 (29%), Positives = 103/203 (50%)
Query: 70 SEAKVDKIIEAASKLVPLGFTSATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIY 129
S++++ ++IE S L+ SA+++ ++ L T+G +LD+ L GG+ G +TEI
Sbjct: 45 SQSELLQLIEQISLLLQPVRCSASKVTSKYL-----TTGDVKLDETLHGGIPVGQLTEIC 99
Query: 130 GEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA----DRYG-LN 184
GE SGK+Q C LC+ QLPL GG A++I E +RL ++A +RY +
Sbjct: 100 GESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFISTESGLETKRLFELARYLPERYPKAD 159
Query: 185 GADVLENVAYARAY-----NTDHQSRLL-LEAASMMVETRFALMIVDSATALYRTDFS-G 237
D++ R Y + + Q ++ + + + L+I+DS + YR +
Sbjct: 160 KKDIIIKNPGDRVYTILCPDLESQEHIIQYQLPILFNRDKIGLVILDSVASNYRAELRYN 219
Query: 238 RGELSARQM-HLAKFLRSLQKLA 259
R + R + ++AK L KLA
Sbjct: 220 RSKSHFRDLDNIAKRGNQLGKLA 242
>UNIPROTKB|E1BVK2 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000074609 KO:K10871 CTD:5892 OMA:QARTQDE
EMBL:AADN02025945 IPI:IPI00597433 RefSeq:NP_001185575.1
UniGene:Gga.9680 ProteinModelPortal:E1BVK2
Ensembl:ENSGALT00000003463 GeneID:417528 KEGG:gga:417528
NextBio:20820813 Uniprot:E1BVK2
Length = 327
Score = 180 (68.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 69/215 (32%), Positives = 103/215 (47%)
Query: 105 ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+ +G+ LD++L+ G+ TG +TE+ G SGKTQ+C ++ + L L Q ++D
Sbjct: 82 LPTGNPSLDQLLDAGLYTGEVTELAGAPGSGKTQVCLSIAASVSLGLRQ-----HVFFLD 136
Query: 165 AEGTFRPQRLLQIADRYGLNGADVLE---NVAYARAYNTDHQSRLLLEAA---SMMVETR 218
+ G F RL Q+ + + LE V R ++ R L E S VE+
Sbjct: 137 STGGFTASRLYQMLQARVEDKEEQLEALQRVQVVRMFDIYEMLRALHEVRDCLSQQVESS 196
Query: 219 ---FALMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVA 274
+++DS +A+ GR E A M LA R L+ LA EF VAVV+TNQV
Sbjct: 197 AGPLKAVLIDSVSAVLSPLLGGRQSEGLAIMMQLA---RELKTLAKEFSVAVVVTNQVTR 253
Query: 275 QVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGR 309
D S G +K G + +TR+ L+ GR
Sbjct: 254 --DSST---GA-LKSALGRSWSFVPSTRVLLQ-GR 281
>FB|FBgn0003482 [details] [associations]
symbol:spn-D "spindle D" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IGI] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0009951 "polarity
specification of dorsal/ventral axis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=TAS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IMP] [GO:0046843 "dorsal appendage formation"
evidence=IMP] InterPro:IPR020588 PROSITE:PS50162 EMBL:AE014297
GO:GO:0005524 GO:GO:0009949 GO:GO:0007294 GO:GO:0003677
GO:GO:0006200 GO:GO:0008298 GO:GO:0046843 GO:GO:0031023
GO:GO:0030720 GO:GO:0030717 GO:GO:0007131 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
KO:K10870 GO:GO:0009951 HSSP:Q06609 EMBL:AY071162 EMBL:AY257540
RefSeq:NP_733200.1 UniGene:Dm.6085 SMR:Q8SZ30 STRING:Q8SZ30
EnsemblMetazoa:FBtr0085116 GeneID:318579 KEGG:dme:Dmel_CG31069
UCSC:CG31069-RA CTD:318579 FlyBase:FBgn0003482 InParanoid:Q8SZ30
OMA:CLNVQIP OrthoDB:EOG4MKKZ1 GenomeRNAi:318579 NextBio:845512
Uniprot:Q8SZ30
Length = 270
Score = 176 (67.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/213 (28%), Positives = 101/213 (47%)
Query: 104 QITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
+I +G + LD GG+ G + E+ G +GKTQ+C LC+ Q+P GG EG A++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 164 DAEGTFRPQRLLQIA---DR-YG-----LNGADVLENVAYARAYNTDHQSRLLLEAASMM 214
D F P RL+ +A +R Y +L+ + Y R D +L +
Sbjct: 105 DTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHL 164
Query: 215 VE-TRFALMIVDSATALYRT--DFSGRGELSARQMHLAKFLRSLQKLADEFGVAV-VITN 270
V+ L+++DS R D + R E+ ++H + +R LQ+ + V V+T+
Sbjct: 165 VDHPDIKLIVIDSLAFTLRMLEDGAHRYEMLL-ELH--ESMRRLQRQHELTWVFTNVLTH 221
Query: 271 QVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRL 303
+ V Q F Q++P G++ +H R+
Sbjct: 222 RYVKQK-----F---QVEPALGDLHSHLINERI 246
>UNIPROTKB|G4MNW7 [details] [associations]
symbol:MGG_06985 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
EMBL:CM001231 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10958 RefSeq:XP_003709736.1 ProteinModelPortal:G4MNW7
EnsemblFungi:MGG_06985T0 GeneID:2685158 KEGG:mgr:MGG_06985
Uniprot:G4MNW7
Length = 548
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 57/172 (33%), Positives = 86/172 (50%)
Query: 111 ELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFR 170
ELD L GG+ TG +TEI GE +GKTQ +L + QLP G G KAMYI E
Sbjct: 143 ELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHGLGR-KAMYIPTEAALS 201
Query: 171 PQRLLQI--ADRYGLNGAD--VLENVAYARAY-NTDHQSRLLLEAASMMVETR-FALMIV 224
+R+ Q+ A+ L+ + L+++ + + + Q +L + R L+I+
Sbjct: 202 TRRVAQMLAANPLLLSASPRPSLDSILSLQPLGDIEAQDHILSFQVPLEAARRNVGLIIL 261
Query: 225 DSATALYRTDFSGRGE----LSARQMHLAKFLRSLQKLADEFGVAVVITNQV 272
DS A +R ++ G L+AR L + L+ LA +AVV+ NQV
Sbjct: 262 DSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVANQV 313
>SGD|S000002411 [details] [associations]
symbol:RAD57 "Protein that stimulates strand exchange"
species:4932 "Saccharomyces cerevisiae" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0033062 "Rhp55-Rhp57
complex" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=IPI] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0045002 "double-strand break repair via
single-strand annealing" evidence=IMP] [GO:0000707 "meiotic DNA
recombinase assembly" evidence=IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
SGD:S000002411 GO:GO:0005524 GO:GO:0003677 EMBL:BK006938
EMBL:Z48008 GO:GO:0000722 GO:GO:0008094 eggNOG:COG0468
GO:GO:0000707 InterPro:IPR013632 Pfam:PF08423 GO:GO:0030491
GO:GO:0033062 KO:K10958 OrthoDB:EOG4HTD1G EMBL:M65061 PIR:JQ1275
RefSeq:NP_010287.1 ProteinModelPortal:P25301 SMR:P25301
DIP:DIP-4774N IntAct:P25301 MINT:MINT-480305 STRING:P25301
EnsemblFungi:YDR004W GeneID:851567 KEGG:sce:YDR004W CYGD:YDR004w
HOGENOM:HOG000141828 OMA:YITTEGD NextBio:969013
Genevestigator:P25301 GermOnline:YDR004W Uniprot:P25301
Length = 460
Score = 182 (69.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 64/244 (26%), Positives = 116/244 (47%)
Query: 44 LKDAGLCTVESVAYSPRKELLQI--KGISEA-KVDKIIEAASKLVPLGFTSATQLHAQRL 100
++ G+C V+ + +P KEL ++ + I+E + +++ L +
Sbjct: 38 VRQNGVCVVDFLTLTP-KELARLIQRSINEVFRFQQLLVHEYNEKYLEICEKNSISPDNG 96
Query: 101 EIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKA 160
T+ +D++L GG+ T ITEI+GE +GK+QL L ++ QL GG GK
Sbjct: 97 PEC-FTTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKC 155
Query: 161 MYIDAEGTFRPQRLLQIA------DRYGLNGADVLENVAYARAYNTDH----QSRLLLEA 210
+YI EG QRL + ++ G+ +++ V+ N +H Q +LLE
Sbjct: 156 VYITTEGDLPTQRLESMLSSRPAYEKLGITQSNIF-TVSCNDLINQEHIINVQLPILLER 214
Query: 211 ASMMVETRFALMIVDSATALYRTDFSGRG--ELSARQMHLAKFLRSLQKLADEFGVAVVI 268
+ ++ L+I+DS + R + + E + +L + LQ LA ++ ++VV+
Sbjct: 215 SKGSIK----LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVV 270
Query: 269 TNQV 272
NQV
Sbjct: 271 ANQV 274
>MGI|MGI:1921585 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:1921585
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AK014491 IPI:IPI00110210 RefSeq:NP_083151.1 UniGene:Mm.19082
ProteinModelPortal:Q9CXE6 SMR:Q9CXE6 STRING:Q9CXE6
PhosphoSite:Q9CXE6 PRIDE:Q9CXE6 DNASU:74335
Ensembl:ENSMUST00000021715 GeneID:74335 KEGG:mmu:74335
UCSC:uc007pdz.1 InParanoid:Q9CXE6 NextBio:340475 Bgee:Q9CXE6
Genevestigator:Q9CXE6 GermOnline:ENSMUSG00000021287 Uniprot:Q9CXE6
Length = 349
Score = 175 (66.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 71/242 (29%), Positives = 113/242 (46%)
Query: 53 ESVAYSPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSATQLHA-QRLEII-----QIT 106
E + YS +L ++ G+ V ++ AAS L G + LH Q+ E +++
Sbjct: 26 EILCYSG-PDLQRLTGLPSHDVQCLLRAAS-LHLRGSRVLSALHLFQQKESFPEQHQRLS 83
Query: 107 SGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAE 166
G LD+ L GG+ IT + G +GKTQL LC+ Q P GG E A+YI E
Sbjct: 84 LGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYICTE 143
Query: 167 GTFRPQRLLQ-IADRYGLNG---ADVLENVAYARAYNTDHQSRL--LLEAASMMVETRFA 220
F +RL Q IA + L +++E + ++ +H + + LLE S V +
Sbjct: 144 DAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVSKKVPILLS 203
Query: 221 -----LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQ 275
L++VDS A +R +F + + R L +L++L+ F V+ NQV
Sbjct: 204 RGMARLVVVDSIAAPFRCEFHLQAS-AIRAKLLLSLGATLRRLSSTFRSPVLCINQVTDM 262
Query: 276 VD 277
V+
Sbjct: 263 VE 264
>UNIPROTKB|I3LTG9 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:QARTQDE
EMBL:FP565655 Ensembl:ENSSSCT00000023297 Uniprot:I3LTG9
Length = 322
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 81/299 (27%), Positives = 130/299 (43%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTSATQLHA 97
V+ L+ G+ TV + + +E+ Q G+S +A V +++ A P A
Sbjct: 17 VQLLQSRGIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPCN--GADLYEE 74
Query: 98 QRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGE 157
+ +++G R LDK+L+ G+ TG +TEI G SGKTQ+C LCV + +
Sbjct: 75 LKTSTAILSTGIRSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCVAANVAHSL---Q 129
Query: 158 GKAMYIDAEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLLLE---AA 211
K +YID+ G R+LQ+ + A L+ + R ++ +L + A
Sbjct: 130 QKVLYIDSNGGLTASRILQLLQARTSDEEEQAGALQRIQVVRVFDIFQMLDVLQDLRGAV 189
Query: 212 SMMVETRFA---LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVI 268
+ V + +++VDS TA + FSG E + + RS F + V
Sbjct: 190 AQQVSSSAGTVKVVVVDSVTA--GSPFSGGNEAAGAAVLCPSIPRSTSLC---FFLPQV- 243
Query: 269 TNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALR----KGRGEERICKVISSPCL 323
TN V D +G KP G + +TRL L G G R+ ++ SP L
Sbjct: 244 TNHVTRDRD-----SGKH-KPALGRSWSFVPSTRLLLDISQDAGAGSRRVARLTKSPRL 296
>UNIPROTKB|E1BX16 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0043524 GO:GO:0010332
GO:GO:0000724 GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 KO:K10879 CTD:7516 OMA:DTDYHFD
GeneTree:ENSGT00390000020445 EMBL:AADN02000315 EMBL:AADN02000316
IPI:IPI00575623 RefSeq:XP_418543.3 UniGene:Gga.12290
Ensembl:ENSGALT00000010141 GeneID:420438 KEGG:gga:420438
Uniprot:E1BX16
Length = 278
Score = 166 (63.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 61/195 (31%), Positives = 94/195 (48%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
S TQL A RLE S + L+ L EG G + E +G +GKT++ + L C
Sbjct: 10 SGTQLLA-RLEG---RSSLKNLEPNLFAEEGSPVHGDVIEFHGPEGTGKTEMLYHLIARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAY--NTDHQSR 205
+P GG E + M+ID + F RL+ I + + + R + N + ++
Sbjct: 66 IIPKSGGGLEVEVMFIDTDYHFDMLRLVTILEHRLEQSTEEMMKRCLGRLFLVNCNSSTQ 125
Query: 206 LLLEAASM--MVETR--FALMIVDSATALYRTDFSGRGE-LSARQMHLAKFLRSLQKLAD 260
LLL S+ M T L+I+DS +A Y D S GE L++++M+L K L+KL
Sbjct: 126 LLLTLYSLENMFCTHPSLCLLILDSISAFYWIDRSNGGESLNSQEMNLKKCANFLEKLVR 185
Query: 261 EFGVAVVITNQVVAQ 275
E + + T Q + Q
Sbjct: 186 EHHLVLFATTQSIMQ 200
>TAIR|locus:2825233 [details] [associations]
symbol:RAD51D "homolog of RAD51 D" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISS;RCA;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016444
"somatic cell DNA recombination" evidence=IMP] [GO:1900426
"positive regulation of defense response to bacterium"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=RCA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 EMBL:AC007583 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 EMBL:AJ549434
EMBL:AB194811 IPI:IPI00533353 PIR:H86212 RefSeq:NP_172254.2
UniGene:At.26372 ProteinModelPortal:Q9LQQ2 SMR:Q9LQQ2 STRING:Q9LQQ2
PRIDE:Q9LQQ2 EnsemblPlants:AT1G07745.1 GeneID:837289
KEGG:ath:AT1G07745 GeneFarm:4787 TAIR:At1g07745
HOGENOM:HOG000242993 InParanoid:Q9LQQ2 KO:K10871 OMA:RIKVERI
PhylomeDB:Q9LQQ2 ProtClustDB:CLSN2699036 Genevestigator:Q9LQQ2
GermOnline:AT1G07745 GO:GO:0002831 GO:GO:0016444 Uniprot:Q9LQQ2
Length = 322
Score = 168 (64.2 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 67/265 (25%), Positives = 112/265 (42%)
Query: 53 ESVAYSPRKELL-QIK-GISEAKVDKIIEAASKLVPLGFTSATQLHAQRLEIIQITSGSR 110
E A+S R+ ++K GI+ + +IE + + G LH + + ++G +
Sbjct: 40 ELTAFSQRQTNADRLKEGIT--LILSLIERQCRPLVNGLKLLEDLHRNKHTL---STGDK 94
Query: 111 ELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFR 170
E D +L+GG G +TE+ G SGKTQ C + G+ +Y+D +F
Sbjct: 95 ETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAASVA-----ENHLGRVLYLDTGNSFS 149
Query: 171 PQRLLQI--ADRYGLNGADVLENVAYARAYN------TDHQSRLLLEAASMMVETRFALM 222
+R+ Q + G V+ + Y+ T + L + E+R L+
Sbjct: 150 ARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRLRLL 209
Query: 223 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIF 282
+VDS ++L G G M +L L+KLA E +A+++TN V G
Sbjct: 210 VVDSISSLITPILGGSGSQGRALMVAIGYL--LKKLAHEHSIAILVTNHTVG-AGGE--- 263
Query: 283 AGPQIKPIGGNIMAHASTTRLALRK 307
G + KP G RL+L +
Sbjct: 264 -GGKTKPALGETWKSIPHVRLSLSR 287
>UNIPROTKB|G3V399 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:AL049840 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V399 SMR:G3V399 Ensembl:ENST00000553361
ArrayExpress:G3V399 Bgee:G3V399 Uniprot:G3V399
Length = 150
Score = 144 (55.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 41/133 (30%), Positives = 65/133 (48%)
Query: 41 VKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAAS-KLVPLGFTSATQLHAQR 99
+ +K A L +V+ V + +L ++ +S +V ++ AS L +A QLH Q+
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 100 ----LEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG 155
+ +++ G LD +L GG+ ITE+ G +GKTQL LC+ Q P GG
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 156 GEGKAMYIDAEGT 168
E + Y GT
Sbjct: 133 LEAEWQYFFIGGT 145
>UNIPROTKB|K7EN92 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 EMBL:AC022916
HGNC:HGNC:9823 Ensembl:ENST00000592577 Uniprot:K7EN92
Length = 249
Score = 157 (60.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 52/174 (29%), Positives = 84/174 (48%)
Query: 105 ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+++G LDK+L+ G+ TG +TEI G SGKTQ+C LC+ + G + +Y+D
Sbjct: 84 LSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCMAANVA---HGLQQNVLYVD 138
Query: 165 AEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLLLEAASMMVET---- 217
+ G RLLQ+ + A+ L + A++ +L E + +
Sbjct: 139 SNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGS 198
Query: 218 --RFALMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLADEFGVAVVI 268
+++VDS TA+ G+ E A M LA R L+ LA + G+AVV+
Sbjct: 199 SGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLA---RELKTLARDLGMAVVV 249
>DICTYBASE|DDB_G0276073 [details] [associations]
symbol:recA "recombinase A" species:44689
"Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009432 "SOS response" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
dictyBase:DDB_G0276073 GO:GO:0005739 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000014 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:BR000215 RefSeq:XP_643316.1
HSSP:P0A7G6 ProteinModelPortal:Q75JL2 SMR:Q75JL2 STRING:Q75JL2
EnsemblProtists:DDB0231571 GeneID:8620362 KEGG:ddi:DDB_G0276073
OMA:IRRTEWI Uniprot:Q75JL2
Length = 452
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/247 (26%), Positives = 115/247 (46%)
Query: 67 KGISEAKVDKIIEAASKLVPLG--FTSATQLHAQRLEIIQITSGSRELDKILE-GGVETG 123
K S + ++ +++ K G +Q Q++E+I SGS LD L GG+ G
Sbjct: 83 KSASSSSMENVLKELEKSFGKGTLMKLGSQFSTQKVEVIP--SGSMGLDIALGVGGLPKG 140
Query: 124 SITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGL 183
+TEI+G SGKT L L V Q Q G G +IDAE PQ A R G+
Sbjct: 141 RVTEIFGPESSGKTTLA--LHVIAQA---QKAG-GNCTFIDAEHALNPQW----AARLGV 190
Query: 184 NGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGR-GE-- 240
N L+ + ++ N + Q+ ++++ + +T +++ A + R + G G+
Sbjct: 191 N----LDELFVSQPDNGE-QALEIVDSL-LRSKTMSVIVVDSVAALVPRVEIEGEMGDSH 244
Query: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHAST 300
L + +++ LR L + ++ NQ+ ++ +F P++ GGN + S+
Sbjct: 245 LGVQARLMSQALRKLSPTLKDSNCVLIFINQIRMKI--GVMFGNPEVTS-GGNALKFFSS 301
Query: 301 TRLALRK 307
R+ +RK
Sbjct: 302 IRIDIRK 308
>UNIPROTKB|I3LM31 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00390000020445 EMBL:FP102134 EMBL:FP103034
Ensembl:ENSSSCT00000026354 Uniprot:I3LM31
Length = 280
Score = 149 (57.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 58/202 (28%), Positives = 96/202 (47%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
SA++L A RLE S RE++ L E G I E +G +GKT++ + L C
Sbjct: 10 SASKLLA-RLEG---RSSLREIEPCLFADEDSPVHGDILEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNT--DHQSR 205
LP +GG E + ++ID + F RL+ + + ++ + R + ++
Sbjct: 66 ILPKAEGGLEVEVLFIDTDYHFDMLRLVTVLEHRLSQSSEEIMKYCLGRLFLVYCSSSTQ 125
Query: 206 LLLEAASMMVETRFA------LMIVDSATALYRTDFSGRGE-LSARQMHLAKFLRSLQKL 258
LLL S+ ET F ++IVDS +A Y D GE ++ ++ L K + L+KL
Sbjct: 126 LLLTLYSL--ETLFCSHPSVCVLIVDSLSAFYWIDRVNGGESINLQESTLKKCSQLLEKL 183
Query: 259 ADEFGVAVVITNQVVAQVDGSA 280
E+ + + T Q + Q +A
Sbjct: 184 VSEYRLVLFATTQSIMQKTSNA 205
Score = 38 (18.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 49 LCTVESVAYSPRKELLQIKGISEAK 73
LCT+ V S K L +++G S +
Sbjct: 1 LCTLADVVPSASKLLARLEGRSSLR 25
>UNIPROTKB|E2REH7 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 CTD:7516 OMA:DTDYHFD GeneTree:ENSGT00390000020445
EMBL:AAEX03010293 EMBL:AAEX03010294 RefSeq:XP_532771.3
ProteinModelPortal:E2REH7 Ensembl:ENSCAFT00000007971 GeneID:475548
KEGG:cfa:475548 NextBio:20851370 Uniprot:E2REH7
Length = 279
Score = 151 (58.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/195 (28%), Positives = 93/195 (47%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
S T+L A RLE S +E++ L E G I E +G +GKT++ + L C
Sbjct: 10 SGTELLA-RLEG---RSSLKEIEPYLFTDEVSSVHGDILEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAY--NTDHQSR 205
LP +GG E + ++ID + F RL+ I + ++ + R + N + ++
Sbjct: 66 ILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEMVKHCLGRLFLVNCNSSTQ 125
Query: 206 LLLEAASMMV----ETRFALMIVDSATALYRTDFSGRGE-LSARQMHLAKFLRSLQKLAD 260
LLL S+ L+I+DS +A Y D GE ++ ++ L K + L+KL +
Sbjct: 126 LLLTLYSLETVVCSHPSLCLLILDSLSAFYWIDRVNGGESVNLQEATLKKCAQFLEKLVN 185
Query: 261 EFGVAVVITNQVVAQ 275
E+ + + T Q + Q
Sbjct: 186 EYRLVLFATTQSIMQ 200
>UNIPROTKB|F1SSP5 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 OMA:DTDYHFD GeneTree:ENSGT00390000020445 EMBL:FP102134
EMBL:FP103034 RefSeq:XP_003134584.1 Ensembl:ENSSSCT00000017888
GeneID:100514260 KEGG:ssc:100514260 Uniprot:F1SSP5
Length = 280
Score = 150 (57.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 58/202 (28%), Positives = 95/202 (47%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
S T+L A RLE S RE++ L E G I E +G +GKT++ + L C
Sbjct: 10 SGTELLA-RLEG---RSSLREIEPCLFADEDSPVHGDILEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNT--DHQSR 205
LP +GG E + ++ID + F RL+ + + ++ + R + ++
Sbjct: 66 ILPKAEGGLEVEVLFIDTDYHFDMLRLVTVLEHRLSQSSEEIMKYCLGRLFLVYCSSSTQ 125
Query: 206 LLLEAASMMVETRFA------LMIVDSATALYRTDFSGRGE-LSARQMHLAKFLRSLQKL 258
LLL S+ ET F ++IVDS +A Y D GE ++ ++ L K + L+KL
Sbjct: 126 LLLTLYSL--ETLFCSHPSVCVLIVDSLSAFYWIDRVNGGESINLQESTLKKCSQLLEKL 183
Query: 259 ADEFGVAVVITNQVVAQVDGSA 280
E+ + + T Q + Q +A
Sbjct: 184 VSEYRLVLFATTQSIMQKTSNA 205
>MGI|MGI:1927345 [details] [associations]
symbol:Xrcc2 "X-ray repair complementing defective repair in
Chinese hamster cells 2" species:10090 "Mus musculus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0010332 "response
to gamma radiation" evidence=IMP] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IGI] [GO:0050769 "positive
regulation of neurogenesis" evidence=IMP] InterPro:IPR020588
PROSITE:PS50162 MGI:MGI:1927345 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0001701 GO:GO:0043524 GO:GO:0010332
GO:GO:0050769 GO:GO:0000724 GO:GO:0010165 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 KO:K10879 CTD:7516
HOGENOM:HOG000004802 HOVERGEN:HBG079347 OMA:DTDYHFD
OrthoDB:EOG4X6C91 EMBL:Y17040 EMBL:AK020192 EMBL:AK014963
EMBL:BC033417 IPI:IPI00317967 RefSeq:NP_065595.2 UniGene:Mm.143767
ProteinModelPortal:Q9CX47 SMR:Q9CX47 STRING:Q9CX47 PRIDE:Q9CX47
Ensembl:ENSMUST00000030773 GeneID:57434 KEGG:mmu:57434
UCSC:uc008wta.1 GeneTree:ENSGT00390000020445 InParanoid:Q9CX47
NextBio:313806 Bgee:Q9CX47 Genevestigator:Q9CX47
GermOnline:ENSMUSG00000028933 Uniprot:Q9CX47
Length = 278
Score = 146 (56.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
S T+L A RLE S +EL+ L E G I E +G +GKT++ + L C
Sbjct: 10 SGTELLA-RLEG---RSSLKELEPNLFADEDSPVHGDIFEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYAR---AY-NTDHQ 203
LP +GG + + ++ID + F RL+ + + ++ + AR AY ++ Q
Sbjct: 66 ILPKSEGGLQIEVLFIDTDYHFDMLRLVTVLEHRLSQSSEEAMKLCLARLFLAYCSSSMQ 125
Query: 204 SRLLLEAASMMVETR--FALMIVDSATALYRTD-FSGRGELSARQMHLAKFLRSLQKLAD 260
L L + ++ +R L+IVDS ++ Y D SG ++ ++ L K + L++L
Sbjct: 126 LLLTLHSLEALLCSRPSLCLLIVDSLSSFYWIDRVSGGESVALQESTLQKCSQLLERLVT 185
Query: 261 EFGVAVVITNQVVAQVDGSAIFAGP 285
E+ + + T Q + Q GS GP
Sbjct: 186 EYRLLLFATTQSLMQ-KGSDSADGP 209
>UNIPROTKB|O43543 [details] [associations]
symbol:XRCC2 "DNA repair protein XRCC2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007126 "meiosis" evidence=TAS] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0003677 GO:GO:0006281
GO:GO:0001701 GO:GO:0043524 EMBL:CH471173 GO:GO:0010332
GO:GO:0050769 GO:GO:0000724 GO:GO:0010165 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 eggNOG:NOG279678 KO:K10879
EMBL:AF035587 EMBL:AC003109 EMBL:Y08837 EMBL:Y17033 EMBL:AF520762
EMBL:AK313607 EMBL:BC042137 IPI:IPI00306229 RefSeq:NP_005422.1
UniGene:Hs.647093 ProteinModelPortal:O43543 SMR:O43543
DIP:DIP-24242N IntAct:O43543 MINT:MINT-137755 STRING:O43543
PhosphoSite:O43543 PRIDE:O43543 DNASU:7516 Ensembl:ENST00000359321
GeneID:7516 KEGG:hsa:7516 UCSC:uc003wld.3 CTD:7516
GeneCards:GC07M152341 HGNC:HGNC:12829 MIM:600375 neXtProt:NX_O43543
Orphanet:227535 PharmGKB:PA37421 HOGENOM:HOG000004802
HOVERGEN:HBG079347 InParanoid:O43543 OMA:DTDYHFD OrthoDB:EOG4X6C91
PhylomeDB:O43543 ChiTaRS:XRCC2 GenomeRNAi:7516 NextBio:29411
Bgee:O43543 CleanEx:HS_XRCC2 Genevestigator:O43543
GermOnline:ENSG00000196584 Uniprot:O43543
Length = 280
Score = 145 (56.1 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 55/200 (27%), Positives = 95/200 (47%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
S T+L A RLE S +E++ L E G I E +G +GKT++ + L C
Sbjct: 10 SGTELLA-RLEG---RSSLKEIEPNLFADEDSPVHGDILEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD-RYGLNGADVLENVA--YARAY--NTDH 202
LP +GG E + ++ID + F RL+ I + R + ++++ + Y ++ H
Sbjct: 66 ILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYCLGRFFLVYCSSSTH 125
Query: 203 QSRLLLEAASMMVE-TRFALMIVDSATALYRTDFSGRGE-LSARQMHLAKFLRSLQKLAD 260
L SM L+I+DS +A Y D GE ++ ++ L K + L+KL +
Sbjct: 126 LLLTLYSLESMFCSHPSLCLLILDSLSAFYWIDRVNGGESVNLQESTLRKCSQCLEKLVN 185
Query: 261 EFGVAVVITNQVVAQVDGSA 280
++ + + T Q + Q S+
Sbjct: 186 DYRLVLFATTQTIMQKASSS 205
>RGD|1306944 [details] [associations]
symbol:Rad51d "RAD51 homolog D (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306944
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 UniGene:Rn.206266
IPI:IPI00782474 Ensembl:ENSRNOT00000055971 Uniprot:D4A2C5
Length = 233
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/208 (26%), Positives = 95/208 (45%)
Query: 35 GIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTS 91
G+ V+ L+ + TV +A + +E+ Q G+S +A V +++ A PL
Sbjct: 11 GLTEEIVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLN--G 68
Query: 92 ATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPL 151
A + +++G LDK+L+ G+ TG +TEI G SGKTQ+C LCV +
Sbjct: 69 ADLYEELKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVC--LCVAANVAH 126
Query: 152 DQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNG---ADVLENVAYARAYNTDHQSRLLL 208
+ +Y+D+ G RLLQ+ + A L+ + +++ +L
Sbjct: 127 SL---QQNVLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLDMLQ 183
Query: 209 EAASMMVETRFA------LMIVDSATAL 230
+ M + A ++IVDS TA+
Sbjct: 184 DLRGTMAQQATASSGTVKVVIVDSVTAV 211
>RGD|1564823 [details] [associations]
symbol:Xrcc2 "X-ray repair complementing defective repair in
Chinese hamster cells 2" species:10116 "Rattus norvegicus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0010165 "response to X-ray"
evidence=IEA;ISO] [GO:0010332 "response to gamma radiation"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0050769 "positive
regulation of neurogenesis" evidence=IEA;ISO] InterPro:IPR020588
PROSITE:PS50162 RGD:1564823 GO:GO:0005524 GO:GO:0003677
GO:GO:0001701 GO:GO:0043524 GO:GO:0010332 GO:GO:0050769
GO:GO:0000724 GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 KO:K10879 CTD:7516 OMA:DTDYHFD OrthoDB:EOG4X6C91
GeneTree:ENSGT00390000020445 EMBL:CH474057 IPI:IPI00191530
RefSeq:NP_001102685.1 UniGene:Rn.8224 Ensembl:ENSRNOT00000010025
GeneID:499966 KEGG:rno:499966 NextBio:704588 Uniprot:D3ZPC8
Length = 278
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 60/206 (29%), Positives = 95/206 (46%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKIL---EGGVETGSITEIYGEFRSGKTQLCHTLCVTC 147
S T+L A RLE S +EL+ L E G I E +G +GKT++ + L C
Sbjct: 10 SGTELLA-RLEG---RSSLKELEPSLFADEDSPVHGDILEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYAR---AYNTDHQS 204
LP +GG + + ++ID + F RL+ + + ++ + R AY +
Sbjct: 66 ILPKSEGGLQIEVLFIDTDYHFDMLRLVTVLEHRLSQSSEEAIKLCLGRLFLAYCSSSMQ 125
Query: 205 RLL----LEAASMMVETRFALMIVDSATALYRTD-FSGRGELSARQMHLAKFLRSLQKLA 259
LL LEA + L+IVDS ++ Y D SG +S ++ L K + L++L
Sbjct: 126 LLLTLYSLEAL-LCSHPSLCLLIVDSMSSFYWIDRVSGGESVSLQESTLQKCSQLLERLV 184
Query: 260 DEFGVAVVITNQVVAQVDGSAIFAGP 285
E+ + + T Q + Q GS GP
Sbjct: 185 TEYRLLLFATTQSLLQ-KGSDSAEGP 209
>UNIPROTKB|H7C2Q5 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C2Q5 Ensembl:ENST00000425173 Bgee:H7C2Q5
Uniprot:H7C2Q5
Length = 213
Score = 138 (53.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/85 (44%), Positives = 46/85 (54%)
Query: 94 QLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQ 153
Q H Q II S LD IL GGV TEI G GKTQLC L V Q+P
Sbjct: 25 QEHTQGF-IITFCSA---LDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECF 80
Query: 154 GGGEGKAMYIDAEGTFRPQRLLQIA 178
GG G+A++ID EG+F R++ +A
Sbjct: 81 GGVAGEAVFIDTEGSFMVDRVVDLA 105
>UNIPROTKB|A7MB17 [details] [associations]
symbol:XRCC2 "XRCC2 protein" species:9913 "Bos taurus"
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
eggNOG:NOG279678 KO:K10879 CTD:7516 HOGENOM:HOG000004802
HOVERGEN:HBG079347 OMA:DTDYHFD OrthoDB:EOG4X6C91
GeneTree:ENSGT00390000020445 EMBL:DAAA02012055 EMBL:BC151285
IPI:IPI00867036 RefSeq:NP_001095824.1 UniGene:Bt.33372
STRING:A7MB17 Ensembl:ENSBTAT00000043719 GeneID:789410
KEGG:bta:789410 InParanoid:A7MB17 NextBio:20929670 Uniprot:A7MB17
Length = 280
Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 53/195 (27%), Positives = 94/195 (48%)
Query: 91 SATQLHAQRLEIIQITSGSRELDKILEGGVET---GSITEIYGEFRSGKTQLCHTLCVTC 147
S T+L A RLE S +E++ L E+ G + E +G +GKT++ + L C
Sbjct: 10 SGTELLA-RLEG---RSSLKEIEPHLFADEESPVHGDVLEFHGPEGTGKTEMLYHLTARC 65
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNT--DHQSR 205
LP +GG E + ++ID + F RL+ + + ++ + R + ++
Sbjct: 66 ILPKSEGGLEVEVVFIDTDYHFDMLRLVTVLEHRLPQSSEEMVKHCLGRLFLVYCSSSTQ 125
Query: 206 LLLEAASM--MV--ETRFALMIVDSATALYRTDFSGRGE-LSARQMHLAKFLRSLQKLAD 260
LLL S+ M+ L+I+DS +A Y D GE ++ ++ L K + L+KL +
Sbjct: 126 LLLTLCSLETMLCRHPSVCLLILDSLSAFYWIDRVNGGESVNLQESTLRKCSQLLEKLVN 185
Query: 261 EFGVAVVITNQVVAQ 275
E+ + + T Q + Q
Sbjct: 186 EYRLVLFATTQSIMQ 200
>UNIPROTKB|D3ZZP3 [details] [associations]
symbol:Rad51l3 "Protein Rad51l3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:CH473948 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 IPI:IPI00195181 UniGene:Rn.206266
Ensembl:ENSRNOT00000011912 Uniprot:D3ZZP3
Length = 275
Score = 134 (52.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 44/146 (30%), Positives = 72/146 (49%)
Query: 35 GIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGIS-EAKVD--KIIEAASKLVPLGFTS 91
G+ V+ L+ + TV +A + +E+ Q G+S +A V +++ A PL
Sbjct: 11 GLTEEIVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLN--G 68
Query: 92 ATQLHAQRLEIIQITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPL 151
A + +++G LDK+L+ G+ TG +TEI G SGKTQ+C LCV +
Sbjct: 69 ADLYEELKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVC--LCVAANVAH 126
Query: 152 DQGGGEGKAMYIDAEGTFRPQRLLQI 177
+ +Y+D+ G RLLQ+
Sbjct: 127 SL---QQNVLYVDSNGGMTASRLLQL 149
>TIGR_CMR|CJE_1845 [details] [associations]
symbol:CJE_1845 "recA protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_179815.1
ProteinModelPortal:Q5HSC0 SMR:Q5HSC0 STRING:Q5HSC0 GeneID:3232472
KEGG:cjr:CJE1845 PATRIC:20045522 OMA:TRKGAWY
BioCyc:CJEJ195099:GJC0-1884-MONOMER Uniprot:Q5HSC0
Length = 343
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 71/243 (29%), Positives = 106/243 (43%)
Query: 76 KIIEAASKLVPLGFTSATQLHAQRLEIIQITS---GSRELDKILE-GGVETGSITEIYGE 131
K ++AA K + F T L E+ QI S GS LD L GGV G I EIYG
Sbjct: 7 KSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGVPKGRIIEIYGP 66
Query: 132 FRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLEN 191
SGKT L + CQ + GG +IDAE ++ A G+N D+
Sbjct: 67 ESSGKTTLTLHIIAECQ----KAGGV--CAFIDAEHALD----VKYAKNLGVNTDDL--- 113
Query: 192 VAYARAYNTDHQSRLLLE--AASMMVETRFALMIVDSATALYRTDFSG-RGE----LSAR 244
Y + Q+ ++E A S V+ +++ A + + G G+ L AR
Sbjct: 114 --YVSQPDFGEQALEIVETIARSGAVDL---IVVDSVAALTPKAEIEGDMGDQHVGLQAR 168
Query: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLA 304
M A LR L + + V+ NQ+ ++ G+ + P+ GGN + ++ RL
Sbjct: 169 LMSQA--LRKLTGIVHKMNTTVIFINQIRMKI-GAMGYGTPETTT-GGNALKFYASVRLD 224
Query: 305 LRK 307
+RK
Sbjct: 225 VRK 227
>UNIPROTKB|J3QR58 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007066 "female meiosis sister
chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
Ensembl:ENST00000461271 Uniprot:J3QR58
Length = 135
Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 126 TEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA 178
TEI G GKTQLC L V Q+P GG G+A++ID EG+F R++ +A
Sbjct: 4 TEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLA 56
>CGD|CAL0005415 [details] [associations]
symbol:RAD57 species:5476 "Candida albicans" [GO:0033062
"Rhp55-Rhp57 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0030491 "heteroduplex formation" evidence=IEA]
[GO:0000707 "meiotic DNA recombinase assembly" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 CGD:CAL0005415 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 EMBL:AACQ01000076 EMBL:AACQ01000075
KO:K10958 RefSeq:XP_715957.1 RefSeq:XP_716015.1
ProteinModelPortal:Q5A2U1 GeneID:3642333 GeneID:3642354
KEGG:cal:CaO19.2174 KEGG:cal:CaO19.9720 Uniprot:Q5A2U1
Length = 511
Score = 111 (44.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/135 (23%), Positives = 58/135 (42%)
Query: 105 ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
I++G +D+ L GG+ G +TEI+G GK+ L C K +YI
Sbjct: 85 ISTGLPSIDRELGGGIPIGEVTEIFGASGCGKSHFLFQLLSNCGKEFSTS----KNIYIS 140
Query: 165 AEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVET---RFAL 221
E +RL R N L+ ++Y + + Q +L + +++ + L
Sbjct: 141 TESFLETKRLKDFIGRNSSNIDTDLDRISYIYCQDLESQDHILFTQLPLKLDSDKGKTKL 200
Query: 222 MIVDSATALYRTDFS 236
+++DS +R + S
Sbjct: 201 LVLDSIAQHFRREDS 215
Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 242 SARQMHLAKFLRSLQKLADEFGVAVVITNQV 272
+A+ ++ + + L +LA +F +A+VI NQV
Sbjct: 263 TAKLYYICQLYQHLSRLAQDFNIAIVIVNQV 293
>UNIPROTKB|G3V3Q2 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0010033 "response to organic substance" evidence=IEA]
EMBL:AL049840 InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V3Q2 SMR:G3V3Q2 Ensembl:ENST00000554974
ArrayExpress:G3V3Q2 Bgee:G3V3Q2 Uniprot:G3V3Q2
Length = 141
Score = 107 (42.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 221 LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA 280
L+++DS A +R +F + + R HL +L++L+ F V+ NQV ++
Sbjct: 4 LVVIDSVAAPFRCEFDSQAS-APRARHLQSLGATLRELSSAFQSPVLCINQVTEAMEEQG 62
Query: 281 IFAGP------QIKPIGGNIMAHASTTRLALRKGRGEE-------RICKVISSPCLAEAE 327
GP ++ P G A+ RL + R EE R +V+S+P L +
Sbjct: 63 AAHGPLGFWDERVSPALGITWANQLLVRLLADRLREEEAALGCPARTLRVLSAPHLPPSS 122
Query: 328 ARFQISAQGV 337
+ ISA+GV
Sbjct: 123 CSYTISAEGV 132
>TIGR_CMR|BA_3915 [details] [associations]
symbol:BA_3915 "recA protein, group I intron-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AF229167 RefSeq:NP_846162.1
RefSeq:YP_029881.1 ProteinModelPortal:Q9APZ2 SMR:Q9APZ2
IntAct:Q9APZ2 EnsemblBacteria:EBBACT00000011833
EnsemblBacteria:EBBACT00000023909 EnsemblBacteria:EBBACT00000082851
GeneID:1087627 GeneID:2850041 KEGG:ban:BA_3915 KEGG:bat:BAS3629
PATRIC:18785420 ProtClustDB:PRK09354 Uniprot:Q9APZ2
Length = 343
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 64/238 (26%), Positives = 99/238 (41%)
Query: 71 EAKVDKIIEAASKLVPLGFTSATQLHAQRLEIIQITSGSRELDKILE-GGVETGSITEIY 129
+A +D ++ K G A+R ++ ++SGS LD L GG G I EIY
Sbjct: 5 QAALDMALKQIEKQFGKGSIMKLGEQAER-KVSTVSSGSLALDVALGVGGYPRGRIIEIY 63
Query: 130 GEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVL 189
G SGKT T+ + + + GG+ A +IDAE P A + G+N ++L
Sbjct: 64 GPESSGKT----TVSLHAIAEVQRQGGQ--AAFIDAEHAMDPV----YAQKLGVNIDELL 113
Query: 190 ENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLA 249
+ + L+ A ++ +V A S G L AR M A
Sbjct: 114 LSQPDTGEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVG-LQARLMSQA 172
Query: 250 KFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRK 307
LR L ++ + NQ+ +V +F P+ P GG + ST RL +R+
Sbjct: 173 --LRKLSGAINKSKTIAIFINQIREKV--GVMFGNPETTP-GGRALKFYSTVRLEVRR 225
>UNIPROTKB|P16971 [details] [associations]
symbol:recA "Protein RecA" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0009295 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 EMBL:X52132 EMBL:U87792
EMBL:U56238 PIR:S10370 RefSeq:NP_389576.2 ProteinModelPortal:P16971
SMR:P16971 IntAct:P16971 EnsemblBacteria:EBBACT00000002648
GeneID:939497 KEGG:bsu:BSU16940 PATRIC:18975195 GenoList:BSU16940
BioCyc:BSUB:BSU16940-MONOMER Uniprot:P16971
Length = 348
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 59/207 (28%), Positives = 86/207 (41%)
Query: 102 IIQITSGSRELDKILE-GGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKA 160
I + SGS LD L GG G I E+YG SGKT T+ + + Q GG+ A
Sbjct: 35 ISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKT----TVALHAIAEVQQQGGQ--A 88
Query: 161 MYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA 220
+IDAE P A + G+N ++L + + L+ A +V
Sbjct: 89 AFIDAEHALDPV----YAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSV 144
Query: 221 LMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA 280
+V A S G L AR M A LR L ++ + NQ+ +V
Sbjct: 145 AALVPKAEIEGDMGDSHVG-LQARLMSQA--LRKLSGAINKSKTIAIFINQIREKV--GV 199
Query: 281 IFAGPQIKPIGGNIMAHASTTRLALRK 307
+F P+ P GG + S+ RL +R+
Sbjct: 200 MFGNPETTP-GGRALKFYSSVRLEVRR 225
>TIGR_CMR|NSE_0530 [details] [associations]
symbol:NSE_0530 "recA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_506414.1 ProteinModelPortal:Q2GDN2 SMR:Q2GDN2
STRING:Q2GDN2 GeneID:3931948 KEGG:nse:NSE_0530 PATRIC:22681109
BioCyc:NSEN222891:GHFU-550-MONOMER Uniprot:Q2GDN2
Length = 327
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 56/208 (26%), Positives = 94/208 (45%)
Query: 105 ITSGSRELDKILEGGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
I++GS LD L GG+ G I EI+G SGKT L TL + + Q G G +ID
Sbjct: 36 ISTGSIGLDSALGGGIPKGRIIEIFGPESSGKTTL--TLHIIAEA---QKNG-GTCAFID 89
Query: 165 AEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLLLEAA--SMMVETRFALM 222
AE P A R G+ +E + ++ +T Q+ ++++ S V+ ++
Sbjct: 90 AEHALDPV----YARRLGVK----IEELLISQP-DTGEQALEIVDSLIKSGAVDV---IV 137
Query: 223 IVDSATALYRTDFSGR-GELSA--RQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
+ A + + G G+L + L++ LR + VV NQ+ ++
Sbjct: 138 VDSVAALTPKAEIEGEMGDLHVGLQARLLSQALRKITASVSRSNCVVVFINQIRMKI--G 195
Query: 280 AIFAGPQIKPIGGNIMAHASTTRLALRK 307
+F P+ GGN + S+ R+ +RK
Sbjct: 196 VMFGSPETTT-GGNALKFYSSVRIDIRK 222
>TIGR_CMR|GSU_0145 [details] [associations]
symbol:GSU_0145 "recA protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:NP_951207.1 ProteinModelPortal:P62215 SMR:P62215
GeneID:2688015 KEGG:gsu:GSU0145 PATRIC:22023038
BioCyc:GSUL243231:GH27-171-MONOMER Uniprot:P62215
Length = 338
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 57/208 (27%), Positives = 85/208 (40%)
Query: 101 EIIQITSGSRELDKILE-GGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGK 159
++ I +GS LD L GGV G I EIYG SGKT L + Q GG
Sbjct: 36 DVAAIPTGSLSLDLALGVGGVPRGRIIEIYGPESSGKTTLALHIAAEAQ---KMGG---I 89
Query: 160 AMYIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRF 219
A ++DAE + A + G+ D+L + + L+ A ++
Sbjct: 90 AAFVDAEHALD----IGYARKLGVKTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDS 145
Query: 220 ALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
+V A S G L AR M A LR L + + V+ NQ+ ++
Sbjct: 146 VAALVPKAEIEGEMGDSHMG-LQARLMSQA--LRKLTGIISKSNCCVIFINQIRMKI--G 200
Query: 280 AIFAGPQIKPIGGNIMAHASTTRLALRK 307
+F P+ GGN + ++ RL +RK
Sbjct: 201 VMFGNPETTT-GGNALKFYASVRLDIRK 227
>TIGR_CMR|SO_3430 [details] [associations]
symbol:SO_3430 "recA protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
RefSeq:NP_718983.1 ProteinModelPortal:Q8EBS0 GeneID:1171105
KEGG:son:SO_3430 PATRIC:23526548 Uniprot:Q8EBS0
Length = 357
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 70/269 (26%), Positives = 117/269 (43%)
Query: 88 GFTSATQLHAQR-LEIIQITSGSRELDKIL-EGGVETGSITEIYGEFRSGKTQLCHTLCV 145
G S +L R +++ I++GS LD L GG+ G I EIYG SGKT L +
Sbjct: 23 GKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEVIA 82
Query: 146 TCQLPLDQGGGEGKAM-YIDAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQS 204
Q EGK +IDAE P ++ G D+ +N+ ++ +T Q+
Sbjct: 83 AAQR-------EGKTCAFIDAEHALDPIYAKKL-------GVDI-DNLLCSQP-DTGEQA 126
Query: 205 RLLLEAASMMVETRFALMIVDSATALYRTDFSGR-GE----LSARQMHLAKFLRSLQKLA 259
+ +A + +++ A + + G G+ L+AR M A +R L
Sbjct: 127 LEICDALTRSGAVD-VIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQA--MRKLAGNL 183
Query: 260 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRL------ALRKGR---G 310
+ ++ NQ+ ++ +F P+ GGN + ++ RL A+++G G
Sbjct: 184 KQSNTLLIFINQIRMKI--GVMFGNPETTT-GGNALKFYASVRLDIRRTGAIKEGDEVVG 240
Query: 311 EERICKVISSPCLAE-AEARFQIS-AQGV 337
E KV+ + A +A FQI QG+
Sbjct: 241 NETRVKVVKNKVAAPFKQAEFQILYGQGI 269
>UNIPROTKB|P0A7G6 [details] [associations]
symbol:recA species:83333 "Escherichia coli K-12"
[GO:0003697 "single-stranded DNA binding" evidence=IEA;IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0009432 "SOS response"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0006974 GO:GO:0006310
GO:GO:0003697 GO:GO:0048870 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:V00328 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:G65049 RefSeq:NP_417179.1 RefSeq:YP_490908.1 PDB:1AA3 PDB:1N03
PDB:1REA PDB:1U94 PDB:1U98 PDB:1U99 PDB:1XMS PDB:1XMV PDB:2REB
PDB:2REC PDB:3CMT PDB:3CMU PDB:3CMV PDB:3CMW PDB:3CMX PDBsum:1AA3
PDBsum:1N03 PDBsum:1REA PDBsum:1U94 PDBsum:1U98 PDBsum:1U99
PDBsum:1XMS PDBsum:1XMV PDBsum:2REB PDBsum:2REC PDBsum:3CMT
PDBsum:3CMU PDBsum:3CMV PDBsum:3CMW PDBsum:3CMX
ProteinModelPortal:P0A7G6 SMR:P0A7G6 DIP:DIP-31832N IntAct:P0A7G6
MINT:MINT-1300726 SWISS-2DPAGE:P0A7G6 PaxDb:P0A7G6 PRIDE:P0A7G6
EnsemblBacteria:EBESCT00000004487 EnsemblBacteria:EBESCT00000004488
EnsemblBacteria:EBESCT00000017937 GeneID:12930224 GeneID:947170
KEGG:ecj:Y75_p2637 KEGG:eco:b2699 PATRIC:32120796 EchoBASE:EB0816
EcoGene:EG10823 BioCyc:EcoCyc:EG10823-MONOMER
BioCyc:ECOL316407:JW2669-MONOMER ChEMBL:CHEMBL3434
EvolutionaryTrace:P0A7G6 Genevestigator:P0A7G6 Uniprot:P0A7G6
Length = 353
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 72/283 (25%), Positives = 121/283 (42%)
Query: 69 ISEAKVDKIIEAASKLVP-LGFTSATQLHAQR-LEIIQITSGSRELDKIL-EGGVETGSI 125
I E K + A ++ G S +L R +++ I++GS LD L GG+ G I
Sbjct: 3 IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 126 TEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAM-YIDAEGTFRPQRLLQIADRYGLN 184
EIYG SGKT L + Q EGK +IDAE P ++
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQR-------EGKTCAFIDAEHALDPIYARKL------- 108
Query: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGR-GE--- 240
G D+ +N+ ++ +T Q+ + +A + +++ A + + G G+
Sbjct: 109 GVDI-DNLLCSQP-DTGEQALEICDALARSGAVD-VIVVDSVAALTPKAEIEGEIGDSHM 165
Query: 241 -LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHAS 299
L+AR M A +R L + ++ NQ+ ++ +F P+ GGN + +
Sbjct: 166 GLAARMMSQA--MRKLAGNLKQSNTLLIFINQIRMKI--GVMFGNPETTT-GGNALKFYA 220
Query: 300 TTRL------ALRKGR---GEERICKVISSPCLAE-AEARFQI 332
+ RL A+++G G E KV+ + A +A FQI
Sbjct: 221 SVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQI 263
>TIGR_CMR|ECH_1109 [details] [associations]
symbol:ECH_1109 "recA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_507893.1 ProteinModelPortal:Q2GF90 SMR:Q2GF90
STRING:Q2GF90 GeneID:3927794 KEGG:ech:ECH_1109 PATRIC:20577554
BioCyc:ECHA205920:GJNR-1112-MONOMER Uniprot:Q2GF90
Length = 357
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 61/249 (24%), Positives = 109/249 (43%)
Query: 67 KGISEAKVDKIIEAASKLVP-LGFTSATQLHAQRLEIIQ-ITSGSRELDKILE-GGVETG 123
K +++ + + A S++ G + +L +E I I++GS LD L GG G
Sbjct: 5 KNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGGFPKG 64
Query: 124 SITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGL 183
I EI+G SGKT L L V + Q G G +IDAE + A + G+
Sbjct: 65 RIVEIFGPESSGKTTLA--LHVIAE---SQKKG-GNCAFIDAEHALD----IMYARKLGV 114
Query: 184 NGADVLENVAYARAYNTDHQSRLLLE--AASMMVETRFALMIVDSATALYRTDFSG-RGE 240
N D++ + +T Q+ ++E S ++ +++ A R + G G+
Sbjct: 115 NTGDLIVSQP-----DTGEQALHIVEYLVCSGAIDV---IVVDSVAALTPRAEIEGDMGD 166
Query: 241 --LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA 298
+ + L+ LR L + + ++ NQ+ ++ ++ P+ GGN +
Sbjct: 167 QHMGLQARLLSHALRKLTSIVSKANCVLIFINQIRMKI--GVVYGNPETTT-GGNALKFY 223
Query: 299 STTRLALRK 307
S+ RL +RK
Sbjct: 224 SSVRLDIRK 232
>TAIR|locus:2207445 [details] [associations]
symbol:RECA1 "homolog of bacterial RecA" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 EMBL:CP002684 GO:GO:0005524
GO:GO:0009570 GO:GO:0006281 GO:GO:0006974 UniGene:At.23809
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:AC002986 UniGene:At.317 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:L15229 EMBL:AY050885
EMBL:AY113960 EMBL:M98039 IPI:IPI00533410 PIR:A46259 PIR:T01050
RefSeq:NP_565198.1 ProteinModelPortal:Q39199 SMR:Q39199
STRING:Q39199 PaxDb:Q39199 PRIDE:Q39199 EnsemblPlants:AT1G79050.1
GeneID:844246 KEGG:ath:AT1G79050 GeneFarm:2669 TAIR:At1g79050
InParanoid:Q39199 OMA:KIREQVA PhylomeDB:Q39199
Genevestigator:Q39199 GermOnline:AT1G79050 Uniprot:Q39199
Length = 439
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 65/239 (27%), Positives = 99/239 (41%)
Query: 76 KIIEAASKLVPLGFT--SATQLHAQRLEIIQ-ITSGSRELDKILEGGVETGSITEIYGEF 132
K +EAA + F S T+L + +++ +SG LD L GG+ G + EIYG
Sbjct: 85 KALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGPE 144
Query: 133 RSGKTQLC-HTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGADVLEN 191
SGKT L H + +L G G AM +DAE F P A L G DV EN
Sbjct: 145 SSGKTTLALHAIAEVQKL------G-GNAMLVDAEHAFDP------AYSKAL-GVDV-EN 189
Query: 192 VAYARAYN----TDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMH 247
+ + N + R+ A ++ + A G L AR M
Sbjct: 190 LIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMG-LQARLMS 248
Query: 248 LAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALR 306
A LR + A + G ++ NQ+ ++ + P++ GG + ++ RL +R
Sbjct: 249 QA--LRKMSGNASKAGCTLIFLNQIRYKI--GVYYGNPEVTS-GGIALKFFASVRLEIR 302
>TIGR_CMR|DET_1606 [details] [associations]
symbol:DET_1606 "recA protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_182301.1 ProteinModelPortal:Q3Z648 SMR:Q3Z648
STRING:Q3Z648 GeneID:3229079 KEGG:det:DET1606 PATRIC:21610224
BioCyc:DETH243164:GJNF-1607-MONOMER Uniprot:Q3Z648
Length = 337
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 59/204 (28%), Positives = 84/204 (41%)
Query: 105 ITSGSRELDKILE-GGVETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
I + S LD L GG+ G I+EI+G SGKT L + Q GE KA YI
Sbjct: 40 IPTSSLALDIALGVGGIPRGRISEIFGPEGSGKTTLAQHIIAQAQKM-----GE-KAAYI 93
Query: 164 DAEGTFRPQRLLQIADRYGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMI 223
D E P+ A G+N ++L + L+ A ++ +
Sbjct: 94 DVEHALDPK----YASTCGVNLDELLISQPDTGEEALGIAEELVRSTAIGVIVIDSVAAL 149
Query: 224 VDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA 283
V A S G L AR M A LR L + AV+ NQ+ +V +F
Sbjct: 150 VPKAEIEGDMGDSHVG-LQARLMSQA--LRKLTASIGQTRTAVIFINQLREKV--GVMFG 204
Query: 284 GPQIKPIGGNIMAHASTTRLALRK 307
P++ P GG + S+ R+ LR+
Sbjct: 205 NPEVTP-GGRALKFYSSVRIDLRR 227
>UNIPROTKB|H0YD61 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR003583
SMART:SM00278 GO:GO:0003677 GO:GO:0006281 EMBL:AC022405
EMBL:AC012476 HGNC:HGNC:9817 ChiTaRS:RAD51 Ensembl:ENST00000533741
Uniprot:H0YD61
Length = 65
Score = 92 (37.4 bits), Expect = 0.00077, P = 0.00077
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 56 AYSPRKELLQIKGISEAKVDKIIEAASKLVPL 87
AY+P+KEL+ IKGISEAK DKI+ + + L
Sbjct: 2 AYAPKKELINIKGISEAKADKILTESRSVARL 33
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 342 321 0.00085 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 140
No. of states in DFA: 576 (61 KB)
Total size of DFA: 170 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.66u 0.11s 23.77t Elapsed: 00:00:01
Total cpu time: 23.68u 0.11s 23.79t Elapsed: 00:00:01
Start: Sat May 11 13:10:18 2013 End: Sat May 11 13:10:19 2013
WARNINGS ISSUED: 1