BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019383
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELD
RQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDID
GCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCD
RRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSC
LPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECM
IDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR

High Scoring Gene Products

Symbol, full name Information P value
ULP1D
UB-like protease 1D
protein from Arabidopsis thaliana 2.3e-10
OTS2
OVERLY TOLERANT TO SALT 2
protein from Arabidopsis thaliana 2.9e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019383
        (342 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2195598 - symbol:ULP1D "UB-like protease 1D" s...   175  2.3e-10   1
TAIR|locus:2194574 - symbol:OTS2 "OVERLY TOLERANT TO SALT...   115  2.9e-10   2


>TAIR|locus:2195598 [details] [associations]
            symbol:ULP1D "UB-like protease 1D" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA;ISS] [GO:0016926
            "protein desumoylation" evidence=RCA;IDA] [GO:0016929
            "SUMO-specific protease activity" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IGI] [GO:0010228 "vegetative to
            reproductive phase transition of meristem" evidence=IGI;RCA]
            [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
            morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
            [GO:0045492 "xylan biosynthetic process" evidence=RCA] [GO:0048765
            "root hair cell differentiation" evidence=RCA] [GO:0050665
            "hydrogen peroxide biosynthetic process" evidence=RCA] [GO:0071555
            "cell wall organization" evidence=RCA] InterPro:IPR003653
            Pfam:PF02902 PROSITE:PS50600 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0016607 GO:GO:0009651
            GO:GO:0006508 GO:GO:0010228 eggNOG:COG5160 GO:GO:0016929
            GO:GO:0016926 EMBL:AC004473 HOGENOM:HOG000128552 KO:K16287
            ProtClustDB:CLSN2690394 EMBL:DQ304543 IPI:IPI00546774 PIR:T02274
            RefSeq:NP_176228.3 UniGene:At.43275 UniGene:At.64986
            ProteinModelPortal:Q2PS26 SMR:Q2PS26 STRING:Q2PS26 MEROPS:C48.A04
            EnsemblPlants:AT1G60220.1 GeneID:842317 KEGG:ath:AT1G60220
            TAIR:At1g60220 InParanoid:Q2PS26 OMA:HETPREW PhylomeDB:Q2PS26
            Genevestigator:Q2PS26 Uniprot:Q2PS26
        Length = 584

 Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 72/235 (30%), Positives = 106/235 (45%)

Query:   130 SSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGD 189
             S D   Q     +  S+S+F++VF +      D +   AF KEL  L  C+RRK ++   
Sbjct:   150 SKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAFGKELEDLG-CERRKHKAGRK 205

Query:   190 ----LSQRGR--QNV-RSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQS--------- 233
                 LS   R   +V ++      F  G K    N   K+      P   S         
Sbjct:   206 PVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESKGNKKSKEPYGKKRPMESSTYSLIDDDD 265

Query:   234 -----GENSSSCLPKKKE-SFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHI 287
                   +N +S     +E S+E  PS++ R RK+    +++ DE       EE++ S   
Sbjct:   266 DDDDDDDNDTSGHETPREWSWEKSPSQSSRRRKKSEDTVINVDE-------EEAQPST-- 316

Query:   288 ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR 342
                EQA E  E + +  I YP+R DP  V++C  D+  LAP  YLTSP+MNFY+R
Sbjct:   317 -VAEQAAELPEGLQE-DICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMR 369

 Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 75/282 (26%), Positives = 119/282 (42%)

Query:    10 KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELG 69
             K+   IDW   +  + D+VP EL +  +  PTP       SDD     +L   + D++L 
Sbjct:    16 KKDFVIDWSSAMD-KEDEVP-ELEIVNTTKPTPPPPPTFFSDDQTDSPKL---LTDRDLD 70

Query:    70 VRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSP 129
              ++ R K   + +   LPDKG+KI   +  LE+E +RR L G+    +++D   K+  S 
Sbjct:    71 EQLERKKAILT-LGPGLPDKGEKIRLKIADLEEEKQRRVLEGSK---MEVDRSSKVVSST 126

Query:   130 SSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDR-RKMRSDG 188
             SS         PQ  + S  TS  R   +     R+ NA  KE+S         K ++D 
Sbjct:   127 SSGSDVL----PQGNAVSKDTS--RGNADSKDTSRQGNADSKEVSRSTFSAVFSKPKTDS 180

Query:   189 DLSQRGRQNVRSSSRKWPFHK-GDKSFN--SNGSQ--KD--RASLTCPSHQSGENSSSCL 241
                +   + +     +   HK G K     SNG +   D  +A  +     SG   S   
Sbjct:   181 QSKKAFGKELEDLGCERRKHKAGRKPVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESKGN 240

Query:   242 PKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEG 283
              K KE +     K P   +     L+D+D+   +D   ++ G
Sbjct:   241 KKSKEPYG---KKRPM--ESSTYSLIDDDDDDDDDDDNDTSG 277


>TAIR|locus:2194574 [details] [associations]
            symbol:OTS2 "OVERLY TOLERANT TO SALT 2" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA;ISS] [GO:0016926
            "protein desumoylation" evidence=RCA;IDA] [GO:0016929
            "SUMO-specific protease activity" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IGI] [GO:0010228 "vegetative to
            reproductive phase transition of meristem" evidence=IGI;RCA]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
            evidence=RCA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005654
            GO:GO:0009651 GO:GO:0006508 GO:GO:0010228 EMBL:AC007067
            eggNOG:COG5160 GO:GO:0016929 GO:GO:0016926 EMBL:AY092981
            EMBL:AY128798 IPI:IPI00529693 IPI:IPI00534077 RefSeq:NP_172527.2
            RefSeq:NP_973802.1 UniGene:At.42174 ProteinModelPortal:Q8RWN0
            SMR:Q8RWN0 STRING:Q8RWN0 MEROPS:C48.A05 PaxDb:Q8RWN0 PRIDE:Q8RWN0
            EnsemblPlants:AT1G10570.1 GeneID:837598 KEGG:ath:AT1G10570
            TAIR:At1g10570 HOGENOM:HOG000128552 InParanoid:Q8RWN0 KO:K16287
            OMA:PDKEDES PhylomeDB:Q8RWN0 ProtClustDB:CLSN2690394
            Genevestigator:Q8RWN0 Uniprot:Q8RWN0
        Length = 571

 Score = 115 (45.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 41/127 (32%), Positives = 59/127 (46%)

Query:    10 KRKLNIDWEEVLPGRNDDVPA-ELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQEL 68
             K  LNIDW++ L G +++VP  E+I     PP     S     +P       R + D EL
Sbjct:    14 KTMLNIDWDDAL-G-DEEVPELEIIATDKIPPREPTLS---GYEPAVSV---RSLRDNEL 65

Query:    69 GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDID-GCDKLTQ 127
                + R +   +++   L DKG+KI   +  LE E +RR       +  D D GC  L +
Sbjct:    66 DDHLKRQRSLLTRLGDKLADKGEKIRNRIGELEYEKQRRMFQQRTKM-QDADNGCQILEK 124

Query:   128 SPSSDCF 134
               SSD F
Sbjct:   125 PKSSDVF 131

 Score = 106 (42.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 32/95 (33%), Positives = 48/95 (50%)

Query:   251 LPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSR 310
             L S + R + +  ++ LDEDE P+                E+A E  E + +  IYYPS 
Sbjct:   276 LQSSSCRKKSDDKVINLDEDE-PLSPM-----------VVEEACELPEGLPE-DIYYPSS 322

Query:   311 VDPES---VEICYTDINHLAPAAYLTSPIMNFYIR 342
                +    V++   D+  L+P  YLTSP++NFYIR
Sbjct:   323 DQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIR 357


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.129   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      342       342   0.00096  116 3  11 23  0.47    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  238 KB (2129 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.55u 0.09s 39.64t   Elapsed:  00:00:02
  Total cpu time:  39.55u 0.09s 39.64t   Elapsed:  00:00:02
  Start:  Sat May 11 13:15:54 2013   End:  Sat May 11 13:15:56 2013

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