Query 019384
Match_columns 342
No_of_seqs 174 out of 1513
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 15:15:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 4.8E-42 1.7E-46 305.1 35.4 283 16-327 10-302 (304)
2 4gqb_B Methylosome protein 50; 100.0 2.7E-42 9.2E-47 312.1 33.8 281 17-327 28-331 (344)
3 4g56_B MGC81050 protein; prote 100.0 3.8E-42 1.3E-46 312.8 34.3 282 16-326 39-342 (357)
4 1vyh_C Platelet-activating fac 100.0 1.2E-41 4.1E-46 315.1 35.6 282 16-325 105-409 (410)
5 3mmy_A MRNA export factor; mRN 100.0 1.9E-40 6.4E-45 300.1 38.4 322 6-335 26-367 (368)
6 3ow8_A WD repeat-containing pr 100.0 7.7E-41 2.6E-45 299.8 35.0 282 16-325 29-319 (321)
7 1got_B GT-beta; complex (GTP-b 100.0 1E-40 3.5E-45 301.2 35.6 274 16-307 52-334 (340)
8 1yfq_A Cell cycle arrest prote 100.0 1.4E-40 4.7E-45 298.9 34.8 309 12-325 4-339 (342)
9 2pbi_B Guanine nucleotide-bind 100.0 2.1E-40 7.3E-45 300.9 35.5 277 16-307 61-348 (354)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-40 5.6E-45 300.5 34.2 294 16-326 12-334 (345)
11 3iz6_a 40S ribosomal protein R 100.0 1.7E-40 6E-45 304.2 29.8 292 16-327 63-375 (380)
12 1nr0_A Actin interacting prote 100.0 5.5E-39 1.9E-43 311.9 36.8 289 16-327 144-567 (611)
13 4ery_A WD repeat-containing pr 100.0 1.8E-38 6E-43 282.6 36.7 289 16-326 20-311 (312)
14 1nr0_A Actin interacting prote 100.0 3.2E-39 1.1E-43 313.6 34.3 286 16-325 187-609 (611)
15 2xzm_R RACK1; ribosome, transl 100.0 1.8E-38 6.1E-43 286.8 34.3 282 16-327 18-340 (343)
16 3frx_A Guanine nucleotide-bind 100.0 3.6E-38 1.2E-42 282.0 35.7 278 16-326 14-316 (319)
17 1erj_A Transcriptional repress 100.0 3.3E-38 1.1E-42 290.4 34.7 285 17-327 62-389 (393)
18 2hes_X YDR267CP; beta-propelle 100.0 7.2E-38 2.5E-42 281.4 33.4 291 16-326 11-327 (330)
19 2ymu_A WD-40 repeat protein; u 100.0 2.5E-37 8.5E-42 297.3 36.3 271 16-307 300-571 (577)
20 2pm7_B Protein transport prote 100.0 1.1E-36 3.9E-41 269.5 31.1 252 16-333 6-292 (297)
21 4aow_A Guanine nucleotide-bind 100.0 8.7E-36 3E-40 267.2 36.5 282 16-328 35-338 (340)
22 3i2n_A WD repeat-containing pr 100.0 3.2E-36 1.1E-40 271.6 31.3 293 13-328 12-354 (357)
23 3zwl_B Eukaryotic translation 100.0 2.3E-35 7.8E-40 266.8 36.9 296 6-327 15-346 (369)
24 4h5i_A Guanine nucleotide-exch 100.0 1.8E-36 6.3E-41 276.1 29.8 281 21-326 16-342 (365)
25 2ymu_A WD-40 repeat protein; u 100.0 2.1E-35 7.2E-40 283.9 37.0 271 16-307 259-530 (577)
26 3dm0_A Maltose-binding peripla 100.0 1.1E-35 3.7E-40 292.8 35.7 281 16-326 379-692 (694)
27 3ei3_B DNA damage-binding prot 100.0 2.3E-35 7.8E-40 269.7 34.6 288 16-326 70-381 (383)
28 1sq9_A Antiviral protein SKI8; 100.0 1.5E-35 5.1E-40 271.6 32.6 296 14-327 11-395 (397)
29 1gxr_A ESG1, transducin-like e 100.0 8.9E-35 3E-39 259.9 34.4 276 16-325 48-335 (337)
30 2pm9_A Protein WEB1, protein t 100.0 4.8E-36 1.6E-40 276.4 26.5 287 18-328 11-338 (416)
31 4e54_B DNA damage-binding prot 100.0 7.3E-36 2.5E-40 278.3 27.8 289 16-328 116-431 (435)
32 4gqb_B Methylosome protein 50; 100.0 2.5E-35 8.7E-40 266.4 30.0 241 17-276 80-333 (344)
33 3k26_A Polycomb protein EED; W 100.0 1.6E-35 5.5E-40 267.7 28.6 293 7-325 3-364 (366)
34 3dw8_B Serine/threonine-protei 100.0 3.9E-35 1.3E-39 273.0 31.4 285 17-307 26-438 (447)
35 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-34 1.1E-38 253.7 35.4 279 16-333 15-302 (313)
36 1got_B GT-beta; complex (GTP-b 100.0 5E-35 1.7E-39 263.9 30.6 241 16-271 94-340 (340)
37 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-34 5.3E-39 262.2 33.8 289 14-327 3-361 (372)
38 2j04_B YDR362CP, TAU91; beta p 100.0 4.6E-36 1.6E-40 285.1 23.1 238 18-273 132-427 (524)
39 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.8E-35 3.3E-39 262.6 30.6 259 15-281 57-342 (345)
40 1r5m_A SIR4-interacting protei 100.0 3.6E-34 1.2E-38 263.8 33.1 282 17-325 43-423 (425)
41 2pm9_A Protein WEB1, protein t 100.0 2.9E-35 1E-39 271.2 24.9 285 16-326 64-413 (416)
42 3gre_A Serine/threonine-protei 100.0 1E-34 3.6E-39 270.0 26.7 284 16-307 60-431 (437)
43 4ggc_A P55CDC, cell division c 100.0 3.2E-33 1.1E-37 248.1 35.0 277 22-328 28-316 (318)
44 4gga_A P55CDC, cell division c 100.0 3.3E-33 1.1E-37 259.1 36.2 279 21-329 107-397 (420)
45 3vl1_A 26S proteasome regulato 100.0 2.4E-33 8.3E-38 259.0 34.7 280 21-326 99-418 (420)
46 3bg1_A Protein SEC13 homolog; 100.0 1.2E-34 4.1E-39 258.8 24.8 248 15-273 9-292 (316)
47 1vyh_C Platelet-activating fac 100.0 7.1E-34 2.4E-38 262.9 30.7 239 16-273 147-410 (410)
48 2ynn_A Coatomer subunit beta'; 100.0 1.8E-33 6.3E-38 249.7 31.6 246 54-327 7-259 (304)
49 4a11_B DNA excision repair pro 100.0 7.4E-33 2.5E-37 253.8 36.1 295 11-328 35-366 (408)
50 3mkq_A Coatomer beta'-subunit; 100.0 2.8E-33 9.7E-38 279.5 34.6 273 16-305 10-292 (814)
51 3ow8_A WD repeat-containing pr 100.0 3E-33 1E-37 250.4 30.5 240 16-272 77-319 (321)
52 4g56_B MGC81050 protein; prote 100.0 1.8E-33 6.2E-38 255.5 28.4 242 16-276 91-345 (357)
53 3frx_A Guanine nucleotide-bind 100.0 3.2E-33 1.1E-37 249.9 29.5 248 16-274 62-317 (319)
54 2xzm_R RACK1; ribosome, transl 100.0 6.6E-33 2.3E-37 250.2 31.8 252 16-275 73-341 (343)
55 3vl1_A 26S proteasome regulato 100.0 3.6E-34 1.2E-38 264.5 23.4 282 20-327 57-365 (420)
56 3dwl_C Actin-related protein 2 100.0 2E-34 7E-39 262.6 21.1 247 14-273 6-280 (377)
57 4aez_A CDC20, WD repeat-contai 100.0 7.5E-33 2.5E-37 255.1 31.5 283 22-338 96-391 (401)
58 2oaj_A Protein SNI1; WD40 repe 100.0 7.1E-33 2.4E-37 279.5 34.0 117 16-132 14-130 (902)
59 3v7d_B Cell division control p 100.0 3.1E-32 1.1E-36 255.1 35.9 284 16-331 118-425 (464)
60 2hes_X YDR267CP; beta-propelle 100.0 1.7E-33 6E-38 252.8 25.9 245 17-274 56-328 (330)
61 1gxr_A ESG1, transducin-like e 100.0 5.9E-33 2E-37 248.0 29.1 272 17-307 7-287 (337)
62 2pbi_B Guanine nucleotide-bind 100.0 6E-33 2.1E-37 251.8 29.3 239 16-271 103-354 (354)
63 3jrp_A Fusion protein of prote 100.0 1.4E-32 4.7E-37 249.6 29.0 245 16-326 8-286 (379)
64 3iz6_a 40S ribosomal protein R 100.0 2.5E-33 8.6E-38 256.6 23.6 251 16-276 105-377 (380)
65 2oaj_A Protein SNI1; WD40 repe 100.0 2.7E-32 9.2E-37 275.3 32.3 277 18-307 97-652 (902)
66 1p22_A F-BOX/WD-repeat protein 100.0 3.5E-32 1.2E-36 253.2 30.7 275 16-328 130-415 (435)
67 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-32 1.2E-36 283.6 33.6 285 16-326 612-912 (1249)
68 3f3f_A Nucleoporin SEH1; struc 100.0 8E-32 2.7E-36 240.9 30.0 263 14-278 6-341 (351)
69 1pgu_A Actin interacting prote 100.0 4.1E-31 1.4E-35 255.3 34.7 296 16-328 157-573 (615)
70 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-31 1E-35 247.5 32.3 279 16-326 156-441 (445)
71 1erj_A Transcriptional repress 100.0 1.3E-31 4.5E-36 246.3 29.3 241 19-274 123-389 (393)
72 3bg1_A Protein SEC13 homolog; 100.0 2.1E-32 7.1E-37 244.3 23.2 248 57-326 10-292 (316)
73 4gga_A P55CDC, cell division c 100.0 3.5E-31 1.2E-35 245.4 31.0 260 16-292 144-413 (420)
74 3sfz_A APAF-1, apoptotic pepti 100.0 5.4E-31 1.8E-35 274.6 35.7 288 16-307 654-1025(1249)
75 4ery_A WD repeat-containing pr 100.0 6.3E-31 2.1E-35 233.7 30.2 244 16-273 62-311 (312)
76 2j04_A TAU60, YPL007P, hypothe 100.0 3.9E-32 1.3E-36 254.4 23.2 261 15-307 11-289 (588)
77 1pgu_A Actin interacting prote 100.0 3E-31 1E-35 256.2 29.5 282 17-326 251-613 (615)
78 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-32 1.1E-36 250.9 21.5 270 21-303 36-331 (402)
79 4aez_A CDC20, WD repeat-contai 100.0 2E-30 6.8E-35 238.9 31.4 248 17-281 132-387 (401)
80 2j04_B YDR362CP, TAU91; beta p 100.0 3.4E-31 1.1E-35 251.7 26.3 252 17-274 205-517 (524)
81 3v7d_B Cell division control p 100.0 1.2E-29 4.2E-34 237.5 35.3 264 16-307 159-453 (464)
82 3k26_A Polycomb protein EED; W 100.0 4.3E-31 1.5E-35 238.6 23.7 246 17-273 67-365 (366)
83 3dm0_A Maltose-binding peripla 100.0 2.5E-30 8.6E-35 254.6 31.0 248 16-273 427-692 (694)
84 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.5E-29 5.3E-34 235.9 34.3 262 16-307 115-382 (445)
85 3f3f_A Nucleoporin SEH1; struc 100.0 5E-30 1.7E-34 229.2 29.3 249 57-327 8-337 (351)
86 3dwl_C Actin-related protein 2 100.0 1.6E-31 5.5E-36 243.4 19.6 244 58-306 9-272 (377)
87 3jro_A Fusion protein of prote 100.0 8.7E-31 3E-35 260.1 26.5 247 14-326 4-284 (753)
88 4gq1_A NUP37; propeller, trans 100.0 5.1E-30 1.8E-34 235.7 28.6 279 20-307 16-381 (393)
89 3gre_A Serine/threonine-protei 100.0 1.2E-31 4.2E-36 249.2 17.3 294 4-327 2-359 (437)
90 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-30 4E-35 244.4 23.6 259 17-318 83-362 (588)
91 4ggc_A P55CDC, cell division c 100.0 1.9E-29 6.4E-34 223.8 30.2 243 16-275 64-316 (318)
92 3ei3_B DNA damage-binding prot 100.0 9E-30 3.1E-34 232.6 27.3 243 17-274 116-382 (383)
93 2xyi_A Probable histone-bindin 100.0 8.9E-30 3E-34 236.8 27.2 254 16-338 125-421 (430)
94 3lrv_A PRE-mRNA-splicing facto 100.0 4E-30 1.4E-34 231.9 23.1 261 26-307 43-324 (343)
95 4e54_B DNA damage-binding prot 100.0 4.1E-30 1.4E-34 239.4 23.7 249 16-277 161-433 (435)
96 3zwl_B Eukaryotic translation 100.0 5.5E-29 1.9E-33 224.8 30.0 247 16-277 71-349 (369)
97 1k8k_C P40, ARP2/3 complex 41 100.0 7.6E-30 2.6E-34 231.2 24.4 245 58-327 6-274 (372)
98 3vu4_A KMHSV2; beta-propeller 100.0 5.4E-29 1.9E-33 225.8 28.9 268 16-307 16-327 (355)
99 4aow_A Guanine nucleotide-bind 100.0 1.4E-28 4.7E-33 220.2 30.7 249 16-276 83-339 (340)
100 3i2n_A WD repeat-containing pr 100.0 2.6E-29 9E-34 226.3 24.4 245 17-277 63-356 (357)
101 3mkq_A Coatomer beta'-subunit; 100.0 2.3E-28 7.7E-33 244.1 33.4 274 16-305 52-376 (814)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-28 6.3E-33 229.2 30.0 275 20-302 5-371 (450)
103 1sq9_A Antiviral protein SKI8; 100.0 8E-29 2.7E-33 226.8 26.4 249 56-327 12-322 (397)
104 4h5i_A Guanine nucleotide-exch 100.0 5E-29 1.7E-33 226.9 24.5 203 16-274 130-343 (365)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 9.4E-29 3.2E-33 227.6 25.2 248 16-277 78-345 (402)
106 4a11_B DNA excision repair pro 100.0 1.4E-27 4.9E-32 218.6 31.1 254 16-282 96-373 (408)
107 2pm7_B Protein transport prote 100.0 2.6E-28 8.9E-33 215.7 25.0 208 95-326 4-237 (297)
108 1yfq_A Cell cycle arrest prote 100.0 3.3E-28 1.1E-32 218.1 25.4 231 58-307 9-273 (342)
109 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-27 6.7E-32 210.1 30.0 233 54-307 12-246 (313)
110 1r5m_A SIR4-interacting protei 100.0 6.8E-28 2.3E-32 221.7 28.1 243 16-273 146-424 (425)
111 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-27 4.6E-32 222.3 28.3 252 16-294 170-433 (435)
112 3bws_A Protein LP49; two-domai 100.0 3.6E-27 1.2E-31 218.5 30.5 275 19-326 122-431 (433)
113 3dw8_B Serine/threonine-protei 100.0 3.1E-28 1.1E-32 226.3 21.6 256 57-327 25-373 (447)
114 3vu4_A KMHSV2; beta-propeller 100.0 8.8E-27 3E-31 211.2 28.5 238 56-328 15-272 (355)
115 1l0q_A Surface layer protein; 100.0 3.2E-26 1.1E-30 209.3 30.5 251 32-305 3-263 (391)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.1E-26 1.7E-30 212.6 27.4 243 17-273 100-390 (450)
117 4gq1_A NUP37; propeller, trans 100.0 9.3E-27 3.2E-31 214.0 21.5 239 19-272 89-387 (393)
118 3mmy_A MRNA export factor; mRN 99.9 2.9E-26 9.9E-31 206.8 24.0 241 16-272 83-344 (368)
119 2w18_A PALB2, fancn, partner a 99.9 1E-25 3.5E-30 199.1 26.3 276 21-325 41-355 (356)
120 1l0q_A Surface layer protein; 99.9 5.6E-25 1.9E-29 201.0 31.0 262 19-300 31-304 (391)
121 2w18_A PALB2, fancn, partner a 99.9 5.1E-26 1.7E-30 201.0 20.0 202 13-272 105-355 (356)
122 3lrv_A PRE-mRNA-splicing facto 99.9 4.4E-25 1.5E-29 198.8 24.0 232 19-273 76-332 (343)
123 3jrp_A Fusion protein of prote 99.9 1.8E-25 6.1E-30 202.6 20.8 210 94-327 5-240 (379)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.1E-25 3.1E-29 202.2 22.0 268 20-307 63-375 (415)
125 3bws_A Protein LP49; two-domai 99.9 6.1E-23 2.1E-27 190.0 31.7 271 18-306 59-365 (433)
126 2xyi_A Probable histone-bindin 99.9 2.5E-23 8.6E-28 193.3 27.3 209 54-327 122-353 (430)
127 2ecf_A Dipeptidyl peptidase IV 99.9 5.9E-23 2E-27 203.2 31.3 275 19-305 36-399 (741)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-22 4E-27 188.0 30.9 249 31-299 143-411 (415)
129 2ojh_A Uncharacterized protein 99.9 1.8E-23 6.2E-28 182.4 22.9 257 36-307 17-293 (297)
130 3vgz_A Uncharacterized protein 99.9 8.4E-22 2.9E-26 177.0 34.2 287 19-323 40-351 (353)
131 3jro_A Fusion protein of prote 99.9 5.3E-24 1.8E-28 211.3 20.6 209 95-327 4-238 (753)
132 1nir_A Nitrite reductase; hemo 99.9 3.9E-22 1.3E-26 190.5 30.9 290 21-329 180-516 (543)
133 2z3z_A Dipeptidyl aminopeptida 99.9 2.6E-22 8.8E-27 197.6 27.8 269 20-306 82-421 (706)
134 2ecf_A Dipeptidyl peptidase IV 99.9 2.7E-22 9.1E-27 198.5 23.8 267 21-306 110-445 (741)
135 2z3z_A Dipeptidyl aminopeptida 99.9 6E-22 2.1E-26 195.0 25.8 274 19-306 25-376 (706)
136 1ri6_A Putative isomerase YBHE 99.9 4.9E-21 1.7E-25 171.1 29.2 267 32-305 6-296 (343)
137 1nir_A Nitrite reductase; hemo 99.9 1.2E-21 4E-26 187.2 25.9 265 27-304 145-439 (543)
138 3o4h_A Acylamino-acid-releasin 99.9 2.4E-21 8.3E-26 186.6 24.8 261 19-306 21-302 (582)
139 1pby_B Quinohemoprotein amine 99.9 5.5E-21 1.9E-25 170.3 25.0 265 32-328 2-311 (337)
140 3u4y_A Uncharacterized protein 99.9 3E-20 1E-24 165.7 29.6 277 25-327 3-304 (331)
141 1xfd_A DIP, dipeptidyl aminope 99.9 3E-21 1E-25 190.3 24.7 274 19-306 16-380 (723)
142 1xfd_A DIP, dipeptidyl aminope 99.9 1.7E-20 5.7E-25 185.0 23.3 273 21-305 62-429 (723)
143 1ri6_A Putative isomerase YBHE 99.9 2.1E-19 7.2E-24 160.4 27.9 272 17-299 35-336 (343)
144 1k32_A Tricorn protease; prote 99.9 2.1E-20 7.3E-25 191.8 24.1 265 16-305 200-491 (1045)
145 1k32_A Tricorn protease; prote 99.9 8E-20 2.7E-24 187.5 27.4 276 18-306 294-628 (1045)
146 3hfq_A Uncharacterized protein 99.9 9.2E-19 3.2E-23 157.3 30.8 262 39-306 14-306 (347)
147 2ojh_A Uncharacterized protein 99.8 1.7E-19 5.7E-24 157.1 20.7 236 17-265 39-293 (297)
148 1jmx_B Amine dehydrogenase; ox 99.8 1.3E-18 4.4E-23 155.8 26.9 276 24-327 4-325 (349)
149 3u4y_A Uncharacterized protein 99.8 6.2E-18 2.1E-22 150.6 30.2 275 19-298 40-327 (331)
150 3pe7_A Oligogalacturonate lyas 99.8 7.5E-19 2.6E-23 160.1 23.7 285 25-328 41-385 (388)
151 1pby_B Quinohemoprotein amine 99.8 4.3E-19 1.5E-23 158.0 18.9 240 21-282 35-318 (337)
152 3scy_A Hypothetical bacterial 99.8 3.7E-17 1.3E-21 147.7 28.8 266 18-294 48-360 (361)
153 4a5s_A Dipeptidyl peptidase 4 99.8 6.1E-18 2.1E-22 167.5 25.7 269 19-305 16-339 (740)
154 1z68_A Fibroblast activation p 99.8 4.2E-18 1.4E-22 167.9 24.2 267 23-306 19-376 (719)
155 3hfq_A Uncharacterized protein 99.8 9.2E-18 3.2E-22 150.8 23.8 247 18-277 38-322 (347)
156 2oit_A Nucleoporin 214KDA; NH2 99.8 3.4E-18 1.1E-22 158.9 20.3 199 18-222 35-279 (434)
157 1z68_A Fibroblast activation p 99.8 6.4E-18 2.2E-22 166.7 22.1 272 21-305 61-429 (719)
158 3scy_A Hypothetical bacterial 99.8 1.5E-16 5.1E-21 143.7 29.2 285 28-334 10-346 (361)
159 2oit_A Nucleoporin 214KDA; NH2 99.8 7.2E-18 2.5E-22 156.7 16.7 156 18-176 91-279 (434)
160 3o4h_A Acylamino-acid-releasin 99.8 2.5E-17 8.5E-22 158.6 20.5 226 59-306 20-266 (582)
161 3azo_A Aminopeptidase; POP fam 99.7 4.9E-16 1.7E-20 151.7 25.6 277 16-299 20-348 (662)
162 3c5m_A Oligogalacturonate lyas 99.7 3E-16 1E-20 142.9 20.7 267 21-306 37-371 (396)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.2E-16 7.4E-21 143.2 19.3 248 20-275 40-342 (365)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.6E-15 9E-20 136.1 24.6 269 33-306 4-330 (365)
165 3vgz_A Uncharacterized protein 99.7 3.8E-15 1.3E-19 133.4 24.2 226 19-264 88-334 (353)
166 4a5s_A Dipeptidyl peptidase 4 99.7 9.7E-15 3.3E-19 144.6 26.8 271 23-306 65-436 (740)
167 2dg1_A DRP35, lactonase; beta 99.7 1.3E-14 4.3E-19 129.5 24.5 276 19-307 5-301 (333)
168 3fvz_A Peptidyl-glycine alpha- 99.7 3.8E-14 1.3E-18 126.6 27.4 239 19-326 23-321 (329)
169 2oiz_A Aromatic amine dehydrog 99.7 1E-14 3.5E-19 132.2 23.9 259 24-298 54-360 (361)
170 1jmx_B Amine dehydrogenase; ox 99.7 8.3E-15 2.8E-19 130.9 23.0 230 21-282 44-333 (349)
171 1q7f_A NHL, brain tumor CG1071 99.7 2.7E-13 9.3E-18 118.1 28.8 243 16-275 26-281 (286)
172 2gop_A Trilobed protease; beta 99.6 1E-13 3.4E-18 124.2 24.5 250 20-306 15-320 (347)
173 2xdw_A Prolyl endopeptidase; a 99.6 2E-13 6.8E-18 134.5 26.8 249 15-276 120-416 (710)
174 2oiz_A Aromatic amine dehydrog 99.6 2.9E-13 9.9E-18 122.5 24.6 267 39-328 29-335 (361)
175 2z2n_A Virginiamycin B lyase; 99.6 2E-11 6.7E-16 106.4 33.7 264 18-304 13-284 (299)
176 2xdw_A Prolyl endopeptidase; a 99.6 2.6E-12 9E-17 126.5 30.7 266 29-303 81-397 (710)
177 3pe7_A Oligogalacturonate lyas 99.6 1.4E-13 4.8E-18 125.0 19.1 251 16-272 77-380 (388)
178 2bkl_A Prolyl endopeptidase; m 99.6 5.6E-13 1.9E-17 131.0 22.8 244 14-276 115-399 (695)
179 3e5z_A Putative gluconolactona 99.5 5.7E-12 1.9E-16 110.4 26.4 229 17-307 25-278 (296)
180 1rwi_B Serine/threonine-protei 99.5 1.3E-11 4.5E-16 106.2 27.8 237 21-327 25-264 (270)
181 2gop_A Trilobed protease; beta 99.5 4E-12 1.4E-16 113.6 24.2 233 20-287 59-342 (347)
182 3dsm_A Uncharacterized protein 99.5 3.5E-12 1.2E-16 113.8 23.3 247 39-303 15-285 (328)
183 1yr2_A Prolyl oligopeptidase; 99.5 1.9E-12 6.3E-17 128.2 23.5 247 15-276 158-443 (741)
184 3azo_A Aminopeptidase; POP fam 99.5 1.3E-12 4.4E-17 127.4 20.5 240 24-277 81-372 (662)
185 1q7f_A NHL, brain tumor CG1071 99.5 9.3E-12 3.2E-16 108.3 23.7 238 59-327 28-280 (286)
186 3dsm_A Uncharacterized protein 99.5 1.2E-11 4E-16 110.4 24.0 243 19-282 43-309 (328)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.4E-11 8.2E-16 106.9 25.4 241 20-326 18-298 (314)
188 2bkl_A Prolyl endopeptidase; m 99.5 2.3E-11 7.9E-16 119.5 26.3 263 28-304 76-381 (695)
189 3c5m_A Oligogalacturonate lyas 99.5 1.9E-12 6.7E-17 117.5 17.2 243 23-276 84-386 (396)
190 1qks_A Cytochrome CD1 nitrite 99.4 2.1E-10 7.3E-15 109.5 31.2 277 19-303 196-520 (567)
191 2qc5_A Streptogramin B lactona 99.4 7.6E-10 2.6E-14 96.3 31.5 263 19-303 19-289 (300)
192 2dg1_A DRP35, lactonase; beta 99.4 1.9E-10 6.4E-15 102.2 27.0 236 18-264 43-300 (333)
193 3no2_A Uncharacterized protein 99.4 1.2E-10 4.1E-15 101.2 23.9 212 29-304 3-231 (276)
194 1yr2_A Prolyl oligopeptidase; 99.4 5.1E-11 1.7E-15 117.9 23.5 263 28-303 115-424 (741)
195 1qks_A Cytochrome CD1 nitrite 99.4 2.4E-10 8.3E-15 109.1 26.8 265 28-304 164-458 (567)
196 2mad_H Methylamine dehydrogena 99.4 4.3E-09 1.5E-13 95.4 32.8 283 26-331 27-354 (373)
197 2qe8_A Uncharacterized protein 99.4 2.4E-10 8.1E-15 102.5 23.6 258 20-306 17-311 (343)
198 3sjl_D Methylamine dehydrogena 99.3 1E-09 3.5E-14 99.1 26.8 269 24-304 37-350 (386)
199 3sjl_D Methylamine dehydrogena 99.3 9.4E-10 3.2E-14 99.3 25.2 255 24-296 82-384 (386)
200 3g4e_A Regucalcin; six bladed 99.3 2.6E-09 8.9E-14 93.6 27.3 229 21-305 14-261 (297)
201 3iuj_A Prolyl endopeptidase; h 99.3 4.9E-10 1.7E-14 110.0 23.4 245 15-276 124-407 (693)
202 3fvz_A Peptidyl-glycine alpha- 99.3 2.6E-10 9.1E-15 101.5 19.7 115 17-131 88-227 (329)
203 1xip_A Nucleoporin NUP159; bet 99.2 3.3E-10 1.1E-14 102.6 17.8 173 62-306 39-234 (388)
204 2mad_H Methylamine dehydrogena 99.2 1.8E-08 6.2E-13 91.3 28.6 255 9-280 55-356 (373)
205 3hrp_A Uncharacterized protein 99.2 1.5E-08 5E-13 93.1 27.7 235 19-304 130-398 (409)
206 2z2n_A Virginiamycin B lyase; 99.2 4.4E-08 1.5E-12 84.9 28.9 224 59-303 13-242 (299)
207 2ghs_A AGR_C_1268P; regucalcin 99.2 3.7E-08 1.3E-12 87.5 28.1 228 21-306 50-292 (326)
208 1yiq_A Quinohemoprotein alcoho 99.2 8.4E-09 2.9E-13 101.0 24.9 296 30-339 120-581 (689)
209 1kb0_A Quinohemoprotein alcoho 99.1 1.9E-08 6.4E-13 98.4 24.9 284 30-327 127-567 (677)
210 3c75_H MADH, methylamine dehyd 99.1 4.2E-08 1.4E-12 90.0 24.9 282 29-331 82-406 (426)
211 3e5z_A Putative gluconolactona 99.1 1.7E-08 5.7E-13 88.1 21.1 187 17-210 66-278 (296)
212 3dr2_A Exported gluconolactona 99.1 5E-08 1.7E-12 85.6 24.1 98 18-117 43-147 (305)
213 3iuj_A Prolyl endopeptidase; h 99.1 1.6E-08 5.6E-13 99.2 23.0 232 59-305 127-390 (693)
214 1xip_A Nucleoporin NUP159; bet 99.1 3.6E-09 1.2E-13 95.8 15.9 173 19-205 37-230 (388)
215 2hz6_A Endoplasmic reticulum t 99.0 3.2E-10 1.1E-14 102.7 7.8 204 30-299 8-217 (369)
216 3c75_H MADH, methylamine dehyd 99.0 5.3E-08 1.8E-12 89.3 22.1 242 24-281 122-409 (426)
217 1rwi_B Serine/threonine-protei 99.0 1.1E-07 3.8E-12 81.4 22.2 194 19-221 66-264 (270)
218 2qc5_A Streptogramin B lactona 99.0 5.1E-07 1.8E-11 78.1 26.5 223 60-303 19-247 (300)
219 3no2_A Uncharacterized protein 98.9 3.7E-08 1.3E-12 85.4 17.0 178 112-305 5-184 (276)
220 1mda_H Methylamine dehydrogena 98.9 4.4E-07 1.5E-11 81.8 22.6 245 33-295 34-366 (368)
221 3g4e_A Regucalcin; six bladed 98.8 1.1E-06 3.8E-11 76.7 21.7 186 19-208 53-261 (297)
222 3q7m_A Lipoprotein YFGL, BAMB; 98.7 5E-07 1.7E-11 81.5 17.6 232 30-283 102-346 (376)
223 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2.9E-06 9.9E-11 76.5 22.6 231 30-282 52-304 (376)
224 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 2.6E-06 8.8E-11 74.4 20.8 196 18-220 69-298 (314)
225 2ghs_A AGR_C_1268P; regucalcin 98.7 4.3E-06 1.5E-10 74.1 22.1 185 19-208 89-291 (326)
226 1kv9_A Type II quinohemoprotei 98.7 8.6E-06 2.9E-10 79.4 25.3 289 31-333 117-558 (668)
227 2ece_A 462AA long hypothetical 98.6 7.5E-06 2.6E-10 74.7 21.6 228 75-305 100-400 (462)
228 1fwx_A Nitrous oxide reductase 98.6 1.8E-07 6.1E-12 88.2 10.8 260 30-305 100-407 (595)
229 1w6s_A Methanol dehydrogenase 98.6 2.4E-05 8.3E-10 75.0 25.8 54 254-307 483-538 (599)
230 1kb0_A Quinohemoprotein alcoho 98.6 5.7E-06 2E-10 80.8 20.9 268 31-305 77-496 (677)
231 2ad6_A Methanol dehydrogenase 98.5 1.7E-05 5.7E-10 75.9 22.9 260 31-304 115-525 (571)
232 3hrp_A Uncharacterized protein 98.5 1.5E-05 5.2E-10 72.9 20.8 184 25-212 176-403 (409)
233 2fp8_A Strictosidine synthase; 98.5 6.7E-05 2.3E-09 66.0 23.0 240 21-274 20-313 (322)
234 1npe_A Nidogen, entactin; glyc 98.5 0.0005 1.7E-08 58.5 27.8 245 32-298 2-263 (267)
235 2p4o_A Hypothetical protein; p 98.5 0.0002 7E-09 62.5 25.8 230 20-306 32-278 (306)
236 4a2l_A BT_4663, two-component 98.4 0.00068 2.3E-08 67.3 31.4 270 18-304 308-604 (795)
237 3dr2_A Exported gluconolactona 98.4 1.1E-05 3.8E-10 70.5 16.5 185 17-209 83-297 (305)
238 3nol_A Glutamine cyclotransfer 98.4 4.7E-05 1.6E-09 64.5 18.9 193 53-304 33-243 (262)
239 2iwa_A Glutamine cyclotransfer 98.4 5.6E-05 1.9E-09 64.6 19.6 193 53-305 11-225 (266)
240 2qe8_A Uncharacterized protein 98.4 4.3E-05 1.5E-09 68.0 19.5 189 17-207 64-309 (343)
241 4a2l_A BT_4663, two-component 98.4 0.0014 4.9E-08 65.0 32.5 268 19-304 262-561 (795)
242 1yiq_A Quinohemoprotein alcoho 98.4 4.3E-05 1.5E-09 74.7 20.8 101 31-133 70-194 (689)
243 3nol_A Glutamine cyclotransfer 98.4 3.4E-05 1.2E-09 65.4 17.3 185 19-208 42-244 (262)
244 2iwa_A Glutamine cyclotransfer 98.4 0.00014 4.7E-09 62.2 21.2 194 20-219 21-235 (266)
245 1mda_H Methylamine dehydrogena 98.3 1.9E-05 6.6E-10 71.0 16.7 92 82-175 47-158 (368)
246 1k3i_A Galactose oxidase precu 98.3 0.00011 3.8E-09 71.4 23.0 271 24-305 190-530 (656)
247 1flg_A Protein (quinoprotein e 98.3 0.00031 1.1E-08 67.2 24.3 74 254-327 496-581 (582)
248 2hz6_A Endoplasmic reticulum t 98.2 2.1E-07 7.4E-12 84.1 1.4 149 20-178 38-195 (369)
249 3nok_A Glutaminyl cyclase; bet 98.2 6.4E-05 2.2E-09 63.7 16.4 183 19-207 54-253 (268)
250 3hxj_A Pyrrolo-quinoline quino 98.2 0.00015 5E-09 63.5 18.9 57 248-307 259-315 (330)
251 3v9f_A Two-component system se 98.2 0.0024 8E-08 63.3 29.3 268 18-304 311-601 (781)
252 2xe4_A Oligopeptidase B; hydro 98.2 0.00042 1.4E-08 68.5 23.6 195 21-219 175-398 (751)
253 3mbr_X Glutamine cyclotransfer 98.2 0.00038 1.3E-08 58.3 19.6 184 19-207 20-222 (243)
254 3nok_A Glutaminyl cyclase; bet 98.1 0.00023 7.9E-09 60.3 18.0 192 53-307 45-257 (268)
255 3hxj_A Pyrrolo-quinoline quino 98.1 2.8E-05 9.6E-10 68.2 12.2 245 24-302 24-271 (330)
256 3mbr_X Glutamine cyclotransfer 98.1 0.002 6.7E-08 54.0 21.8 118 53-176 11-134 (243)
257 2ece_A 462AA long hypothetical 98.0 0.00047 1.6E-08 63.0 18.9 184 23-207 141-399 (462)
258 3v9f_A Two-component system se 98.0 0.015 5E-07 57.6 32.3 271 18-303 256-556 (781)
259 1kv9_A Type II quinohemoprotei 97.7 0.0032 1.1E-07 61.2 20.2 101 31-133 66-189 (668)
260 3v65_B Low-density lipoprotein 97.6 0.036 1.2E-06 49.9 25.5 239 22-281 79-325 (386)
261 2fp8_A Strictosidine synthase; 97.6 0.013 4.5E-07 51.1 20.8 111 20-131 80-216 (322)
262 2ad6_A Methanol dehydrogenase 97.6 0.013 4.5E-07 55.8 22.2 100 31-133 62-187 (571)
263 2xe4_A Oligopeptidase B; hydro 97.6 0.012 4.3E-07 57.9 22.3 112 62-176 175-305 (751)
264 1npe_A Nidogen, entactin; glyc 97.5 0.032 1.1E-06 47.0 24.7 153 20-175 36-198 (267)
265 1fwx_A Nitrous oxide reductase 97.5 0.0039 1.3E-07 58.9 16.3 232 19-275 133-432 (595)
266 3tc9_A Hypothetical hydrolase; 97.5 0.066 2.2E-06 49.0 25.3 152 63-219 139-299 (430)
267 1k3i_A Galactose oxidase precu 97.4 0.051 1.7E-06 52.6 24.0 262 65-332 190-502 (656)
268 3qqz_A Putative uncharacterize 97.4 0.038 1.3E-06 46.6 20.1 200 96-303 22-241 (255)
269 3tc9_A Hypothetical hydrolase; 97.3 0.089 3E-06 48.1 24.2 150 21-174 138-300 (430)
270 4hw6_A Hypothetical protein, I 97.3 0.091 3.1E-06 48.1 25.4 153 20-174 139-303 (433)
271 2xbg_A YCF48-like protein; pho 97.3 0.07 2.4E-06 46.7 28.0 262 18-303 34-310 (327)
272 3v64_C Agrin; beta propeller, 97.3 0.075 2.6E-06 47.0 26.9 239 20-279 34-280 (349)
273 4hw6_A Hypothetical protein, I 97.3 0.11 3.7E-06 47.6 26.3 235 63-302 141-419 (433)
274 3p5b_L Low density lipoprotein 97.2 0.12 4.2E-06 46.6 26.3 238 39-292 90-338 (400)
275 1w6s_A Methanol dehydrogenase 97.1 0.17 5.7E-06 48.4 23.6 101 31-133 62-193 (599)
276 3v65_B Low-density lipoprotein 97.0 0.17 5.8E-06 45.4 22.9 211 74-301 89-303 (386)
277 3v64_C Agrin; beta propeller, 97.0 0.16 5.6E-06 44.8 24.8 208 78-301 50-260 (349)
278 1ijq_A LDL receptor, low-densi 97.0 0.15 5.3E-06 44.2 27.6 225 40-280 9-244 (316)
279 1n7d_A LDL receptor, low-densi 96.8 0.019 6.7E-07 56.0 14.2 240 40-296 385-636 (699)
280 3sov_A LRP-6, low-density lipo 96.8 0.23 7.9E-06 43.2 21.2 202 80-295 12-218 (318)
281 3p5b_L Low density lipoprotein 96.8 0.3 1E-05 44.1 21.8 206 75-293 86-298 (400)
282 2p4o_A Hypothetical protein; p 96.8 0.23 7.9E-06 42.7 23.4 184 20-208 72-277 (306)
283 3m0c_C LDL receptor, low-densi 96.7 0.35 1.2E-05 47.8 22.4 215 75-304 398-619 (791)
284 3m0c_C LDL receptor, low-densi 96.7 0.57 1.9E-05 46.3 26.3 223 39-277 402-635 (791)
285 3ei3_A DNA damage-binding prot 96.6 0.84 2.9E-05 47.1 31.2 180 19-207 553-755 (1158)
286 2p9w_A MAL S 1 allergenic prot 96.5 0.36 1.2E-05 42.1 20.3 192 103-304 15-252 (334)
287 3amr_A 3-phytase; beta-propell 96.4 0.43 1.5E-05 42.1 20.1 188 30-220 39-262 (355)
288 2ism_A Putative oxidoreductase 96.2 0.62 2.1E-05 41.1 20.3 68 61-130 31-113 (352)
289 1flg_A Protein (quinoprotein e 96.1 0.35 1.2E-05 46.0 18.0 56 121-179 465-520 (582)
290 3amr_A 3-phytase; beta-propell 96.0 0.46 1.6E-05 41.9 16.7 180 111-305 39-251 (355)
291 3sov_A LRP-6, low-density lipo 95.9 0.74 2.5E-05 40.0 24.0 219 40-278 12-242 (318)
292 2xbg_A YCF48-like protein; pho 95.9 0.78 2.7E-05 39.9 19.7 153 17-173 160-320 (327)
293 1ijq_A LDL receptor, low-densi 95.8 0.8 2.7E-05 39.6 25.4 203 78-294 7-217 (316)
294 3kya_A Putative phosphatase; s 95.7 1.3 4.6E-05 40.9 24.1 208 63-273 141-409 (496)
295 3kya_A Putative phosphatase; s 95.4 1.6 5.5E-05 40.4 24.4 152 21-173 140-339 (496)
296 1n7d_A LDL receptor, low-densi 95.3 0.077 2.6E-06 51.8 10.1 182 79-274 384-571 (699)
297 3sre_A PON1, serum paraoxonase 95.0 0.85 2.9E-05 40.3 15.0 59 245-306 166-241 (355)
298 3qqz_A Putative uncharacterize 95.0 1.4 4.8E-05 36.9 24.4 189 20-210 27-244 (255)
299 2p9w_A MAL S 1 allergenic prot 95.0 1.7 5.8E-05 37.9 17.9 150 23-175 16-215 (334)
300 3s94_A LRP-6, low-density lipo 94.8 2.9 0.0001 39.9 24.9 220 39-277 16-246 (619)
301 2xn4_A Kelch-like protein 2; s 94.6 1.9 6.4E-05 36.6 18.7 78 254-339 204-288 (302)
302 3a9g_A Putative uncharacterize 94.5 2.3 7.8E-05 37.5 20.4 236 61-304 29-330 (354)
303 2vpj_A Kelch-like protein 12; 94.2 2.2 7.7E-05 36.1 19.2 71 254-332 206-283 (301)
304 3s94_A LRP-6, low-density lipo 94.1 4.3 0.00015 38.8 20.3 205 78-296 15-224 (619)
305 3sre_A PON1, serum paraoxonase 93.4 3.9 0.00013 36.0 22.2 58 246-304 223-285 (355)
306 3pbp_A Nucleoporin NUP82; beta 93.3 4.5 0.00015 36.6 18.8 102 29-131 30-158 (452)
307 2vpj_A Kelch-like protein 12; 93.2 3.5 0.00012 34.8 18.8 228 30-275 14-279 (301)
308 1zgk_A Kelch-like ECH-associat 93.1 3.7 0.00013 35.0 16.6 72 254-333 215-293 (308)
309 3ii7_A Kelch-like protein 7; p 93.0 3.7 0.00013 34.8 20.2 98 32-131 13-127 (306)
310 3ii7_A Kelch-like protein 7; p 93.0 3.8 0.00013 34.7 16.9 226 81-332 24-277 (306)
311 3ei3_A DNA damage-binding prot 92.5 11 0.00038 38.9 26.2 110 62-173 515-634 (1158)
312 1tl2_A L10, protein (tachylect 92.0 1.2 4E-05 36.6 9.5 101 20-126 41-158 (236)
313 1tl2_A L10, protein (tachylect 91.7 0.56 1.9E-05 38.4 7.3 102 191-303 43-152 (236)
314 1xi4_A Clathrin heavy chain; a 91.3 16 0.00056 38.4 20.1 105 25-131 71-188 (1630)
315 3pbp_A Nucleoporin NUP82; beta 91.3 8.2 0.00028 34.9 18.0 143 152-300 28-194 (452)
316 1zgk_A Kelch-like ECH-associat 90.9 6.8 0.00023 33.2 18.1 227 30-275 24-288 (308)
317 4a0p_A LRP6, LRP-6, low-densit 90.5 12 0.00043 35.6 28.5 216 39-276 13-239 (628)
318 2xzh_A Clathrin heavy chain 1; 89.4 10 0.00035 33.1 29.2 106 24-131 71-189 (365)
319 1cru_A Protein (soluble quinop 88.6 14 0.00049 33.6 16.4 21 283-304 226-246 (454)
320 2g8s_A Glucose/sorbosone dehyd 88.5 12 0.00041 32.7 14.0 57 246-303 132-215 (353)
321 3das_A Putative oxidoreductase 88.2 13 0.00043 32.6 27.7 98 20-119 32-158 (347)
322 2xn4_A Kelch-like protein 2; s 88.2 11 0.00036 31.8 19.2 226 32-276 17-278 (302)
323 1bpo_A Protein (clathrin); cla 87.3 17 0.00058 33.1 29.2 106 24-131 70-188 (494)
324 1cru_A Protein (soluble quinop 86.9 7.8 0.00027 35.4 12.2 101 19-119 26-162 (454)
325 2uvk_A YJHT; unknown function, 86.2 16 0.00054 31.6 18.4 91 30-121 19-128 (357)
326 3das_A Putative oxidoreductase 85.3 18 0.00063 31.6 15.2 56 246-303 142-219 (347)
327 2woz_A Kelch repeat and BTB do 84.5 18 0.0006 30.7 17.7 77 254-332 206-292 (318)
328 4asc_A Kelch repeat and BTB do 83.0 20 0.00069 30.3 18.1 77 254-332 196-282 (315)
329 2g8s_A Glucose/sorbosone dehyd 83.0 23 0.00078 30.8 23.9 58 246-303 273-340 (353)
330 3a9g_A Putative uncharacterize 82.4 24 0.00083 30.7 23.3 95 20-118 29-152 (354)
331 2ism_A Putative oxidoreductase 82.3 24 0.00083 30.6 26.0 96 20-118 31-152 (352)
332 3ott_A Two-component system se 79.3 48 0.0016 32.1 30.6 257 19-301 21-294 (758)
333 2zwa_A Leucine carboxyl methyl 77.0 50 0.0017 31.8 14.2 125 198-331 499-639 (695)
334 2be1_A Serine/threonine-protei 76.5 36 0.0012 29.6 11.8 25 155-179 110-134 (339)
335 4a0p_A LRP6, LRP-6, low-densit 76.2 54 0.0019 31.2 33.0 275 19-302 122-449 (628)
336 2zwa_A Leucine carboxyl methyl 75.4 60 0.0021 31.2 16.5 186 111-306 451-675 (695)
337 4gq2_M Nucleoporin NUP120; bet 75.0 6.4 0.00022 39.7 7.5 38 19-56 235-272 (950)
338 4a9v_A PHOX; hydrolase, beta-p 72.0 45 0.0016 31.3 11.8 61 245-305 477-550 (592)
339 3sbq_A Nitrous-oxide reductase 70.0 66 0.0023 30.3 12.2 107 193-305 327-454 (638)
340 4asc_A Kelch repeat and BTB do 69.3 50 0.0017 27.7 20.5 180 34-221 8-221 (315)
341 2woz_A Kelch repeat and BTB do 68.8 52 0.0018 27.7 18.6 94 34-131 19-136 (318)
342 2be1_A Serine/threonine-protei 68.7 8.9 0.00031 33.5 6.1 102 32-133 11-132 (339)
343 4fhn_B Nucleoporin NUP120; pro 67.0 6.1 0.00021 40.7 5.4 38 19-56 237-274 (1139)
344 3s25_A Hypothetical 7-bladed b 66.0 61 0.0021 27.5 15.9 162 107-303 59-240 (302)
345 3zwu_A Alkaline phosphatase PH 65.7 20 0.00068 33.9 8.2 59 246-304 478-549 (592)
346 3s25_A Hypothetical 7-bladed b 65.6 62 0.0021 27.4 14.2 129 150-305 58-203 (302)
347 2wg3_C Hedgehog-interacting pr 63.9 71 0.0024 29.0 11.4 51 21-71 15-79 (463)
348 4hvt_A Ritya.17583.B, post-pro 63.4 1.1E+02 0.0038 29.6 24.3 234 25-273 134-429 (711)
349 4gq2_M Nucleoporin NUP120; bet 59.6 11 0.00037 38.1 5.5 36 245-280 237-272 (950)
350 3f7f_A Nucleoporin NUP120; nuc 53.7 23 0.0008 34.2 6.3 36 20-57 222-257 (729)
351 4fhn_B Nucleoporin NUP120; pro 51.4 12 0.00042 38.5 4.4 36 245-280 239-274 (1139)
352 3b7f_A Glycosyl hydrolase, BNR 44.4 1.6E+02 0.0054 25.6 12.0 23 19-41 54-77 (394)
353 2xzh_A Clathrin heavy chain 1; 42.2 1.7E+02 0.0059 25.5 21.7 109 105-220 71-188 (365)
354 3f7f_A Nucleoporin NUP120; nuc 38.7 41 0.0014 32.6 5.4 34 245-280 223-256 (729)
355 2wg3_C Hedgehog-interacting pr 37.5 71 0.0024 29.1 6.8 59 246-304 16-91 (463)
356 2uvk_A YJHT; unknown function, 35.1 2E+02 0.007 24.2 15.7 25 30-54 65-99 (357)
357 3ott_A Two-component system se 29.6 3.8E+02 0.013 25.6 35.1 273 20-303 232-534 (758)
358 1xi4_A Clathrin heavy chain; a 26.9 4.7E+02 0.016 28.0 11.1 115 167-304 49-169 (1630)
359 1bpo_A Protein (clathrin); cla 25.3 3.9E+02 0.013 24.4 21.4 109 105-220 70-187 (494)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-42 Score=305.10 Aligned_cols=283 Identities=17% Similarity=0.215 Sum_probs=223.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
..|.+.|++++|+|++++|+|++.||+|+|||+.++... ....|..+|.+++|++++. +++++.|++|++|++.+++.
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 468899999999999999999999999999999887644 4457899999999997665 57999999999999988774
Q ss_pred -eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc---CCeEEEEEcCCeEE
Q 019384 94 -DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV---GNRLVVATAGRHVN 169 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~---~~~~~~~s~d~~v~ 169 (342)
..+.+|...|.+++|+|++.+|+||+.|++|++||+++.... ...+.. +...+.++.++ +..+++++.|++|+
T Consensus 90 ~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~-~~~~~~--h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL-EQTFEG--HEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE-EEEECC--CCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch-hhhhcc--cCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 467899999999999999999999999999999998753221 122222 34445555554 45899999999999
Q ss_pred EEeCCCCCCcccccccccceeeEEEEEee--CCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 170 VYDLRNMSQPEQRRESSLKYQTRCVRCYP--NGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
+||++........ .......+.++.+.| ++..+++++.|+.++ +||.+... ....+.+|.. .|.
T Consensus 167 iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~--iWd~~~~~--~~~~~~~h~~---------~v~ 232 (304)
T 2ynn_A 167 VWSLGQSTPNFTL-TTGQERGVNYVDYYPLPDKPYMITASDDLTIK--IWDYQTKS--CVATLEGHMS---------NVS 232 (304)
T ss_dssp EEETTCSSCSEEE-ECCCTTCEEEEEECCSTTCCEEEEEETTSEEE--EEETTTTE--EEEEEECCSS---------CEE
T ss_pred EEECCCCCcccee-ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEE--EEeCCCCc--cceeeCCCCC---------CEE
Confidence 9999875432221 112223456677765 677899999999764 59986532 2234445543 699
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCC--EEEEEEeccccCCCCCCCCCcEEEEEc
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGR--LLAVASSYTFEEGDKPHEPDAIFVRSV 325 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~--~las~s~~~~~~~~~~~~~~~~~~~~~ 325 (342)
+++|+|++++|++|+.||+|++||.++++.+.++..|...+++++|+|++. +||+|+.++ ++++.+
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g------------~~~~~~ 300 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG------------FTVLSL 300 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE------------EEEEEC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc------------eEEEEe
Confidence 999999999999999999999999999999999999999999999999986 577776554 777766
Q ss_pred cC
Q 019384 326 NE 327 (342)
Q Consensus 326 ~~ 327 (342)
.+
T Consensus 301 ~~ 302 (304)
T 2ynn_A 301 GN 302 (304)
T ss_dssp C-
T ss_pred cc
Confidence 53
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=312.15 Aligned_cols=281 Identities=16% Similarity=0.142 Sum_probs=213.0
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC------------ceeeeeeecCCceEEEEEeCCCCeEEEecCCcEE
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA------------NVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVR 84 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~------------~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~ 84 (342)
.+...|.+++|+|||++|++++ |+++|+||... +.......|...|.+++|++++.+++|+.|++|+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~ 106 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVE 106 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEE
Confidence 3466799999999999999887 77888887321 1223344578899999999999999999999999
Q ss_pred EEEeccCcee-----ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cC-
Q 019384 85 RLVFSHGKED-----ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VG- 156 (342)
Q Consensus 85 ~w~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~- 156 (342)
+||+.+++.. .+.+|...|++++|+|++++|+||+.|++|++||++++.. ...+.. +...+.++.+ ++
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~--~~~~~~--h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV--LSSYRA--HAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECC--CSSCEEEEEECSSCT
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE--EEEEcC--cCCceEEEEecCCCC
Confidence 9999887632 3458999999999999999999999999999999976432 222332 3445555555 44
Q ss_pred CeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCC-ceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 157 NRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNG-TGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 157 ~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
..+++++.|++|++||+++++.............+.+++++|++ ..+++++.|+.+ ++||.+.... ...+.+|..
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v--~~wd~~~~~~--~~~~~~h~~ 258 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV--SLVDTKSTSC--VLSSAVHSQ 258 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE--EEEESCC--C--CEEEECCSS
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE--EEEECCCCcE--EEEEcCCCC
Confidence 36789999999999999987543322222223456789999864 567888999976 4599865432 334555543
Q ss_pred cCCCCceeeeeeEEEEcCCC-CeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCE-EEEEEeccccCCCC
Q 019384 236 SEAGRDIVYPVNAIAFHPIY-GTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRL-LAVASSYTFEEGDK 313 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~-~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~-las~s~~~~~~~~~ 313 (342)
+|++++|+|++ .+|++|+.|++|+|||.++++++ .+.+|.+.|++++||||++. |++++.+.
T Consensus 259 ---------~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~------ 322 (344)
T 4gqb_B 259 ---------CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDH------ 322 (344)
T ss_dssp ---------CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTS------
T ss_pred ---------CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCC------
Confidence 69999999998 47999999999999999988754 56899999999999999975 55666555
Q ss_pred CCCCCcEEEEEccC
Q 019384 314 PHEPDAIFVRSVNE 327 (342)
Q Consensus 314 ~~~~~~~~~~~~~~ 327 (342)
.|++|.+.+
T Consensus 323 -----~v~~w~v~~ 331 (344)
T 4gqb_B 323 -----QVVHHVVPT 331 (344)
T ss_dssp -----CEEEEECCC
T ss_pred -----eEEEEECCC
Confidence 599998743
No 3
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.8e-42 Score=312.77 Aligned_cols=282 Identities=14% Similarity=0.142 Sum_probs=215.2
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeC------CCcEEEEECCCce-----eeeeeecCCceEEEEEeCCCCeEEEecCCcEE
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSW------DKSVRLYDASANV-----LRGEFMHGGPVLDCCFHDDSSGFSASADHTVR 84 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~------Dgti~vwd~~~~~-----~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~ 84 (342)
..|...|++|+|||||++|||||. |++|++|+..++. ......|.+.|.+++|++++.+++++.|++|+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~ 118 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVE 118 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEE
Confidence 358899999999999999999997 7889999986643 23445799999999999999999999999999
Q ss_pred EEEeccCcee-----ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCC
Q 019384 85 RLVFSHGKED-----ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGN 157 (342)
Q Consensus 85 ~w~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~ 157 (342)
+||+.+++.. ...+|...|++++|+|++++|++|+.|++|++||++++.. ...+.. +...+.++.+ +++
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~--~~~~~~--h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV--LKSYNA--HSSEVNCVAACPGKD 194 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE--EEEECC--CSSCEEEEEECTTCS
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE--EEEEcC--CCCCEEEEEEccCCC
Confidence 9999877632 2357999999999999999999999999999999875422 222222 3344555544 443
Q ss_pred -eEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCC-ceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 158 -RLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNG-TGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 158 -~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
.+++++.|++|++||+++++.............+.+++++|++ ..+++++.++.+. +||++..... ..+..|.
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~--~wd~~~~~~~--~~~~~~~- 269 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVS--LVNIKNPDSA--QTSAVHS- 269 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEE--EEESSCGGGC--EEECCCS-
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccccee--EEECCCCcEe--EEEeccc-
Confidence 6889999999999999887543322222334457899999975 5678888888764 5998654332 2334443
Q ss_pred cCCCCceeeeeeEEEEcCCC-CeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECC-CCCEEEEEEeccccCCCC
Q 019384 236 SEAGRDIVYPVNAIAFHPIY-GTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSR-DGRLLAVASSYTFEEGDK 313 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~-~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~sp-dg~~las~s~~~~~~~~~ 313 (342)
.+|++++|+|++ ++|++|+.|++|+|||+++++.+..+ +|...|++|+||| |+++||+++.++
T Consensus 270 --------~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg------ 334 (357)
T 4g56_B 270 --------QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDH------ 334 (357)
T ss_dssp --------SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTS------
T ss_pred --------eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCC------
Confidence 269999999997 57899999999999999998877654 7999999999999 899999998766
Q ss_pred CCCCCcEEEEEcc
Q 019384 314 PHEPDAIFVRSVN 326 (342)
Q Consensus 314 ~~~~~~~~~~~~~ 326 (342)
.|.+|.+.
T Consensus 335 -----~v~iW~~~ 342 (357)
T 4g56_B 335 -----KVLHHHLP 342 (357)
T ss_dssp -----CEEEEECC
T ss_pred -----eEEEEECC
Confidence 59999875
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-41 Score=315.12 Aligned_cols=282 Identities=16% Similarity=0.197 Sum_probs=228.1
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|.+.|++++|+|++++|+||+.||+|+|||+.++... ...+|.+.|.+++|++++. +++|+.|++|++||+.+.+.
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 478999999999999999999999999999999887644 4557999999999997665 56999999999999988763
Q ss_pred -eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEe
Q 019384 94 -DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYD 172 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd 172 (342)
..+.+|...|.+++|+|+++.|++|+.|++|++||++++.. ...+..+......+.++.++..+++++.|++|++||
T Consensus 185 ~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 185 IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp EECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 56789999999999999999999999999999999986432 222333322233334455667899999999999999
Q ss_pred CCCCCCcccccccccceeeEEEEEeeC--------------------CceEEEEccCCeEEEEEeechhhhhcccceeee
Q 019384 173 LRNMSQPEQRRESSLKYQTRCVRCYPN--------------------GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKC 232 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--------------------~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 232 (342)
+++....... ......+.+++++|+ +..+++++.|+.+ ++||.+.... ...+.+
T Consensus 263 ~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i--~iwd~~~~~~--~~~~~~ 336 (410)
T 1vyh_C 263 VATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI--KMWDVSTGMC--LMTLVG 336 (410)
T ss_dssp TTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE--EEEETTTTEE--EEEEEC
T ss_pred CCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE--EEEECCCCce--EEEEEC
Confidence 9876432221 223445788999886 5679999999976 5699865432 233444
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCC
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGD 312 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~ 312 (342)
|. ..|.+++|+|++.+|++|+.||+|++||..+++++..+.+|...|++++|+|++.+|++|+.+.
T Consensus 337 h~---------~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~----- 402 (410)
T 1vyh_C 337 HD---------NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ----- 402 (410)
T ss_dssp CS---------SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTS-----
T ss_pred CC---------CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCC-----
Confidence 43 2699999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCcEEEEEc
Q 019384 313 KPHEPDAIFVRSV 325 (342)
Q Consensus 313 ~~~~~~~~~~~~~ 325 (342)
.|.+|++
T Consensus 403 ------~i~vW~~ 409 (410)
T 1vyh_C 403 ------TVKVWEC 409 (410)
T ss_dssp ------EEEEEC-
T ss_pred ------cEEEEeC
Confidence 5777753
No 5
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=300.11 Aligned_cols=322 Identities=38% Similarity=0.665 Sum_probs=252.4
Q ss_pred CCCCCCccCCCCCCCCeEEEEEcCC---CCeEEEEeCCCcEEEEECCC-cee--eeeeecCCceEEEEEeCCCC-eEEEe
Q 019384 6 PPPTSGRELGNPPSDGISNLRFSNH---SDHLLVSSWDKSVRLYDASA-NVL--RGEFMHGGPVLDCCFHDDSS-GFSAS 78 (342)
Q Consensus 6 ~~~~~~~~~~~~~~~~V~~l~fs~~---~~~l~s~s~Dgti~vwd~~~-~~~--~~~~~h~~~V~~~~~~~~~~-~~s~s 78 (342)
..|..-..+...|.+.|++++|+|+ |++|++|+.||+|+|||+.+ +.. .....|.+.|.+++|++++. +++++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 3455556667899999999999999 69999999999999999986 433 44567999999999997765 57899
Q ss_pred cCCcEEEEEeccCceeecccCCcceeEEEE--eCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC
Q 019384 79 ADHTVRRLVFSHGKEDILGKHDAPVRCIEY--SYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG 156 (342)
Q Consensus 79 ~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~--~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~ 156 (342)
.|+.|++|++.++....+.+|...|.+++| ++++..|++++.|++|++||+++.... ..+ .....+.++.+.+
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~---~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM--MVL---QLPERCYCADVIY 180 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS--EEE---ECSSCEEEEEEET
T ss_pred CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE--EEE---ecCCCceEEEecC
Confidence 999999999998887777889999999999 888889999999999999999864331 122 2334567777778
Q ss_pred CeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCce----EEEEccCCeEEEEEeechhhhh-cccceee
Q 019384 157 NRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTG----YALSSVEGRVAMEFFDLSEASQ-AKKYAFK 231 (342)
Q Consensus 157 ~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~s~~~~~~i~~~d~~~~~~-~~~~~~~ 231 (342)
+.+++++.++.+++||++..................++.+.++... +++++.++.+.+ ||...... .....+.
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i--~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI--HYINPPNPAKDNFTFK 258 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE--EESSCSCHHHHSEEEE
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE--EecCCCCccccceeee
Confidence 8899999999999999987644333333333345566666665544 899999998754 77754322 2334455
Q ss_pred eEEecC---CCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccc
Q 019384 232 CHRKSE---AGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTF 308 (342)
Q Consensus 232 ~h~~~~---~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~ 308 (342)
.|.... ....+..+|.+++|+|++++|++|+.||.|++||+++++++..+.+|...|.+++|+|||++|++++.+++
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccc
Confidence 554321 11222336999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCC---CCCCCcEEEEEccCCccccCCC
Q 019384 309 EEGDK---PHEPDAIFVRSVNEIEVKPKPK 335 (342)
Q Consensus 309 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 335 (342)
..+-. ...++.++++++.+ +++||++
T Consensus 339 ~~~~~~~~~~~~~~i~~~~~~~-~~~p~~~ 367 (368)
T 3mmy_A 339 SKGHEFYNPQKKNYIFLRNAAE-ELKPRNK 367 (368)
T ss_dssp TTCGGGCCTTSCCEEEEECCTT-TTSBC--
T ss_pred cccccccCCCccceeeehhcCc-ccCcccC
Confidence 77665 34555899998877 9999986
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.7e-41 Score=299.78 Aligned_cols=282 Identities=15% Similarity=0.191 Sum_probs=224.9
Q ss_pred CCCCCCeEEEEEcCC----CCeEEEEeCCCcEEEEECCCcee---eeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEE
Q 019384 16 NPPSDGISNLRFSNH----SDHLLVSSWDKSVRLYDASANVL---RGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLV 87 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~----~~~l~s~s~Dgti~vwd~~~~~~---~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~ 87 (342)
..|.+.|++|+|+|+ +++|+|||.|++|||||+..+.. ....+|...|.++.|++++. +++++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 479999999999985 67899999999999999976543 23457999999999987665 46999999999999
Q ss_pred eccCce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCC
Q 019384 88 FSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGR 166 (342)
Q Consensus 88 ~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~ 166 (342)
+.+++. ..+..|...+.+++|+|++++|++|+.|++|++||+++... ...+..+......+.++++++.+++++.|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~--~~~~~~~~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK--EYSLDTRGKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE--EEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce--eEEecCCCceEEEEEECCCCCEEEEEcCCC
Confidence 988774 45677888999999999999999999999999999976432 122222222233345556677999999999
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV 246 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v 246 (342)
.|++||+++++.... .......+.+++++|+++.+++++.|+.+. +||.+.... ...+.+|. ..|
T Consensus 187 ~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg~i~--iwd~~~~~~--~~~~~~h~---------~~v 251 (321)
T 3ow8_A 187 IINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDGYIK--IYDVQHANL--AGTLSGHA---------SWV 251 (321)
T ss_dssp CEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTSCEE--EEETTTCCE--EEEECCCS---------SCE
T ss_pred eEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCCeEE--EEECCCcce--eEEEcCCC---------Cce
Confidence 999999987643221 122344578999999999999999999865 599864322 22334443 269
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEc
Q 019384 247 NAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSV 325 (342)
Q Consensus 247 ~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~ 325 (342)
.+++|+|++.+|++|+.|++|+|||+.+++++.++.+|...|++++|+|||++|++++.+. .|.+|+.
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~-----------~i~vwd~ 319 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ-----------EIHIYDC 319 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC-----------CEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC-----------eEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999998766 4888864
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-40 Score=301.18 Aligned_cols=274 Identities=19% Similarity=0.265 Sum_probs=219.5
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~- 92 (342)
.+|.+.|++++|+|++++|+||+.||+|+|||..++... ....|...|.+++|++++.. ++++.|+.+++|++.+..
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 689999999999999999999999999999999876543 44578999999999977664 689999999999997753
Q ss_pred ----eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEEEEcCC
Q 019384 93 ----EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATAGR 166 (342)
Q Consensus 93 ----~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~d~ 166 (342)
...+.+|...|.++.|++++ .+++++.|++|++||++++.. ...+.. +...+.++.+ ++..+++++.|+
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~--~~~~~~--h~~~v~~~~~~~~~~~l~sg~~d~ 206 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQ--TTTFTG--HTGDVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEE--EEEECC--CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcE--EEEEcC--CCCceEEEEECCCCCEEEEEeCCC
Confidence 23467899999999999866 599999999999999975432 222222 3344555544 566899999999
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV 246 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v 246 (342)
+|++||+++...... .......+.+++++|++..+++++.|+.+. +||.+.......+. |. .....|
T Consensus 207 ~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~--iwd~~~~~~~~~~~---~~------~~~~~v 273 (340)
T 1got_B 207 SAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDATCR--LFDLRADQELMTYS---HD------NIICGI 273 (340)
T ss_dssp CEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEE--EEETTTTEEEEEEC---CT------TCCSCE
T ss_pred cEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCCcEE--EEECCCCcEEEEEc---cC------Ccccce
Confidence 999999987643221 122345688999999999999999999875 59986543221111 11 112358
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 247 NAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 247 ~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
.+++|+|++.+|++|+.||+|++||..+++.+..+.+|...|.+++|+|||++||+|+.+.
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCc
Confidence 9999999999999999999999999999888889999999999999999999999998766
No 8
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-40 Score=298.90 Aligned_cols=309 Identities=24% Similarity=0.433 Sum_probs=250.7
Q ss_pred ccCCCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce----eeeeeecCCceEEEEEeCCCC--eEEEecCCcEEE
Q 019384 12 RELGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV----LRGEFMHGGPVLDCCFHDDSS--GFSASADHTVRR 85 (342)
Q Consensus 12 ~~~~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~----~~~~~~h~~~V~~~~~~~~~~--~~s~s~D~~i~~ 85 (342)
.++..+|.+.|++++|+|++++|++++.||+|+|||+..+. ......|.+.|.+++|++++. +++++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 45677899999999999999999999999999999997765 666778999999999997666 679999999999
Q ss_pred EEe-ccCceeeccc--CCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc----eeeeeecCCCCcEEEEeccCCe
Q 019384 86 LVF-SHGKEDILGK--HDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE----RTLVGTYPQPERVYSLSLVGNR 158 (342)
Q Consensus 86 w~~-~~~~~~~~~~--h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~----~~~~~~~~~~~~v~~~s~~~~~ 158 (342)
|++ .++....+.+ |...|.+++|+| ++.|++++.|++|++||+++..... ...+....+...+.++.++++.
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR 162 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE
T ss_pred EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc
Confidence 999 8888777888 999999999999 9999999999999999986410000 0112222345667888888888
Q ss_pred EEEEEcCCeEEEEeCCC-CCCcccccccccceeeEEEEEee-CCceEEEEccCCeEEEEEeechhh--h--hcccceeee
Q 019384 159 LVVATAGRHVNVYDLRN-MSQPEQRRESSLKYQTRCVRCYP-NGTGYALSSVEGRVAMEFFDLSEA--S--QAKKYAFKC 232 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~s~~~~~~i~~~d~~~~--~--~~~~~~~~~ 232 (342)
+++++.++.|++||+++ ...............+.+++++| ++..+++++.++.+.+ |+.... . ......+..
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i--~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV--EFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEE--EECCTTCCSTTCTTCEEEEC
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEE--EEEcCCCcccccccceeeec
Confidence 99999999999999988 54333333334455788999999 9999999999998766 555332 1 133445666
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCC-CcceEEEEECCCCCEEEEEEeccc-cC
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKY-PTSIAALSFSRDGRLLAVASSYTF-EE 310 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~~las~s~~~~-~~ 310 (342)
|.....+..+.++|.+++|+|++++|++|+.||.|++||+++++.+..+.+| ...|.+++ |||++|++++.+++ ++
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~ 318 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKT 318 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHH
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccc
Confidence 6543333344557999999999999999999999999999999999999998 99999999 99999999999998 77
Q ss_pred CCC-----CCCCCcEEEEE-c
Q 019384 311 GDK-----PHEPDAIFVRS-V 325 (342)
Q Consensus 311 ~~~-----~~~~~~~~~~~-~ 325 (342)
+.+ +..++.|+++. +
T Consensus 319 ~~~~~~~~~~~~~~i~~~~~~ 339 (342)
T 1yfq_A 319 NAAIDQTIELNASSIYIIFDY 339 (342)
T ss_dssp CSSSCTTSCCCCCEEEEEETC
T ss_pred cccccccCCCCCceEEEeccc
Confidence 665 67778999987 5
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-40 Score=300.88 Aligned_cols=277 Identities=17% Similarity=0.240 Sum_probs=219.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee-eeeeecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL-RGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~-~~~~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~- 92 (342)
.+|.+.|++++|+|++++|||||.||+|+|||..+++. .....|...|.+++|+|++.. ++++.|+.+++|++....
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 57999999999999999999999999999999877654 344568889999999987765 689999999999986542
Q ss_pred ------eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc--CCeEEEEEc
Q 019384 93 ------EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--GNRLVVATA 164 (342)
Q Consensus 93 ------~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--~~~~~~~s~ 164 (342)
...+.+|...|.+++|+|++..|++++.|++|++||++++.. ...+..+........++++ ++.+++++.
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTFVSGGC 218 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECCCSSCCEEEEEET
T ss_pred ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEcCCCCCeEEEEEEeCCCCCEEEEEeC
Confidence 234568999999999999999999999999999999976432 2223333222223344443 468999999
Q ss_pred CCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceee
Q 019384 165 GRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVY 244 (342)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~ 244 (342)
|++|++||++++..... . ..+...+.+++++|++..+++++.|+.++ +||++.......+ .. ..+..
T Consensus 219 Dg~v~~wd~~~~~~~~~-~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~--lwd~~~~~~~~~~--~~-------~~~~~ 285 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQA-F-ETHESDVNSVRYYPSGDAFASGSDDATCR--LYDLRADREVAIY--SK-------ESIIF 285 (354)
T ss_dssp TSCEEEEETTTCCEEEE-E-CCCSSCEEEEEECTTSSEEEEEETTSCEE--EEETTTTEEEEEE--CC-------TTCCS
T ss_pred CCeEEEEECCCCcEEEE-e-cCCCCCeEEEEEeCCCCEEEEEeCCCeEE--EEECCCCcEEEEE--cC-------CCccc
Confidence 99999999998643221 1 22345688999999999999999999875 5998654222111 10 01123
Q ss_pred eeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 245 PVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
.+.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|||++||+|+.+.
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 588999999999999999999999999999988889999999999999999999999999776
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=300.49 Aligned_cols=294 Identities=16% Similarity=0.133 Sum_probs=218.6
Q ss_pred CCCCC-CeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee----eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEec
Q 019384 16 NPPSD-GISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR----GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~-~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~----~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~ 89 (342)
..|.+ .|++++|+|++++||||+.|++|+|||+.++... ...+|.+.|.+++|+|++. +++++.|+++++|+..
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 35766 8999999999999999999999999999876432 1247999999999997765 5699999999999998
Q ss_pred cCc---eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc-eeeeeecCCCCcEEE--EeccCCeEEEEE
Q 019384 90 HGK---EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE-RTLVGTYPQPERVYS--LSLVGNRLVVAT 163 (342)
Q Consensus 90 ~~~---~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~-~~~~~~~~~~~~v~~--~s~~~~~~~~~s 163 (342)
... ...+.+|...|.+++|+|++++|++|+.|++|++||++...... ...+.. +...+.+ ++++++.+++++
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS--HTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC--CCSCEEEEEECSSSSCEEEEE
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC--cCCCeEEEEECCCCCEEEEEe
Confidence 765 34578999999999999999999999999999999987543211 111222 3344544 455667899999
Q ss_pred cCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee-------eeEEec
Q 019384 164 AGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF-------KCHRKS 236 (342)
Q Consensus 164 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~-------~~h~~~ 236 (342)
.|++|++||++............+...+.+++++|+++.+++++.|+.+++ |+............ .+-...
T Consensus 170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~i--W~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T 3fm0_A 170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI--WRQYLPGNEQGVACSGSDPSWKCICTL 247 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE--EEEECTTCTTCCCCC---CEEEEEEEE
T ss_pred CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEE--eccccCCCCccceeeccCCccceeEEe
Confidence 999999999876532111112233456889999999999999999998755 77532211111000 000000
Q ss_pred CCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCce---------eeeccCCCCcceEEEEECCCCC-EEEEEEec
Q 019384 237 EAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKK---------RLYQYSKYPTSIAALSFSRDGR-LLAVASSY 306 (342)
Q Consensus 237 ~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~---------~~~~~~~~~~~V~~v~~spdg~-~las~s~~ 306 (342)
...+...|.+++|+|++..|++++.|++|++|+.+... ....+.+|...|++++|+|++. +||+|+.+
T Consensus 248 --~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D 325 (345)
T 3fm0_A 248 --SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD 325 (345)
T ss_dssp --CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT
T ss_pred --cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC
Confidence 01123468999999999999999999999999976432 1223468999999999999985 89988877
Q ss_pred cccCCCCCCCCCcEEEEEcc
Q 019384 307 TFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~ 326 (342)
. .|.+|++.
T Consensus 326 g-----------~v~~W~~~ 334 (345)
T 3fm0_A 326 G-----------EVAFWKYQ 334 (345)
T ss_dssp S-----------CEEEEEEC
T ss_pred C-----------cEEEEEec
Confidence 6 59999774
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-40 Score=304.23 Aligned_cols=292 Identities=19% Similarity=0.292 Sum_probs=226.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee-eeeeecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL-RGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~-~~~~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~- 92 (342)
.+|.+.|++++|+|++++|+||+.||+|+|||+.++.. .....|...|.+++|++++.. ++++.|+.+++|++....
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 68999999999999999999999999999999987754 445579999999999977764 689999999999987532
Q ss_pred -------eeecccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCCCCCCcceeeeee---cCCCCcEEEEec---cCCe
Q 019384 93 -------EDILGKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPRGASGQERTLVGT---YPQPERVYSLSL---VGNR 158 (342)
Q Consensus 93 -------~~~~~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~---~~~~~~v~~~s~---~~~~ 158 (342)
...+.+|...|.+++|.|++ ..|+||+.|++|++||++++... ..+.. ..+...+.++++ +++.
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI--SIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE--EEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE--EEeecccCCCCccCeEEEEeecCCCCE
Confidence 23567999999999999974 57999999999999999864321 11211 124455666665 4578
Q ss_pred EEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCC
Q 019384 159 LVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEA 238 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~ 238 (342)
+++++.|++|++||++......... ..+...+.+++++|++..+++++.|+.++ +||.+.......+ ..+...
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~--lwd~~~~~~~~~~--~~~~~~-- 293 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCR--LFDMRTGHQLQVY--NREPDR-- 293 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEE--EEETTTTEEEEEE--CCCCSS--
T ss_pred EEEEECCCeEEEEECCCCCcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEE--EEECCCCcEEEEe--cccccc--
Confidence 9999999999999998543322221 23445688999999999999999999875 5998754332221 111110
Q ss_pred CCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeecc----CCCCcceEEEEECCCCCEEEEEEeccccCCCCC
Q 019384 239 GRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQY----SKYPTSIAALSFSRDGRLLAVASSYTFEEGDKP 314 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~----~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~ 314 (342)
.......|.+++|+|+|++|++|+.||.|++||..+++.+..+ .+|...|.+++|+|||++|++|+.+.
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~------- 366 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK------- 366 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-------
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-------
Confidence 0111224889999999999999999999999999887776555 67999999999999999999998776
Q ss_pred CCCCcEEEEEccC
Q 019384 315 HEPDAIFVRSVNE 327 (342)
Q Consensus 315 ~~~~~~~~~~~~~ 327 (342)
.|.+|+++.
T Consensus 367 ----~i~iW~~~~ 375 (380)
T 3iz6_a 367 ----NLKIWAFSG 375 (380)
T ss_dssp ----CEEEEECCS
T ss_pred ----CEEEEecCC
Confidence 588998753
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.5e-39 Score=311.93 Aligned_cols=289 Identities=18% Similarity=0.231 Sum_probs=218.5
Q ss_pred CCCCCCeEEEEEcCCCC-eEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCc
Q 019384 16 NPPSDGISNLRFSNHSD-HLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGK 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~-~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~ 92 (342)
..|...|++++|+|++. +|+||+.|++|+|||...+++.. ..+|.+.|.+++|+|++.+ ++++.|++|++|+..+++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc
Confidence 57899999999999987 59999999999999998776544 4579999999999987764 699999999999988776
Q ss_pred ee-ec-c------cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCccee--------------------------
Q 019384 93 ED-IL-G------KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERT-------------------------- 138 (342)
Q Consensus 93 ~~-~~-~------~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~-------------------------- 138 (342)
.. .+ . +|...|.+++|+|++++|+|++.|++|++||++++......
T Consensus 224 ~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 224 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 42 33 2 79999999999999999999999999999998754211000
Q ss_pred ------------eee-ecCCCCcEEEE--eccCCeEEEEEcCCeEEEEeCCCCCCcccccc-------------------
Q 019384 139 ------------LVG-TYPQPERVYSL--SLVGNRLVVATAGRHVNVYDLRNMSQPEQRRE------------------- 184 (342)
Q Consensus 139 ------------~~~-~~~~~~~v~~~--s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~------------------- 184 (342)
... ...+...+.++ +++++.+++++.|++|++||+.++........
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s 383 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 383 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEE
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEE
Confidence 000 01233345444 45667999999999999999876432100000
Q ss_pred -------------------------------------------------------------cccceeeEEEEEeeCCceE
Q 019384 185 -------------------------------------------------------------SSLKYQTRCVRCYPNGTGY 203 (342)
Q Consensus 185 -------------------------------------------------------------~~~~~~~~~v~~~~~~~~~ 203 (342)
..+...+.+++++|+++.+
T Consensus 384 ~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~l 463 (611)
T 1nr0_A 384 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFV 463 (611)
T ss_dssp EETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEE
T ss_pred EEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEE
Confidence 0001224678899999999
Q ss_pred EEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC-ceeeec--
Q 019384 204 ALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN-KKRLYQ-- 280 (342)
Q Consensus 204 ~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~-~~~~~~-- 280 (342)
++++.|+.+. +||........ .....|. ..|++|+|+|+|++|++++.|++|++||+.+ ++.+..
T Consensus 464 asgs~D~~v~--lwd~~~~~~~~-~~~~~h~---------~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~ 531 (611)
T 1nr0_A 464 AVGGQDSKVH--VYKLSGASVSE-VKTIVHP---------AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS 531 (611)
T ss_dssp EEEETTSEEE--EEEEETTEEEE-EEEEECS---------SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred EEeCCCCeEE--EEEccCCceee-eeccCCC---------CceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeee
Confidence 9999999765 58875421111 1112232 3699999999999999999999999999987 565543
Q ss_pred cCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 281 YSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 281 ~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
+..|...|++++|||||++||+++.+. .|.+|+++.
T Consensus 532 ~~~H~~~V~~v~fspdg~~lasgs~D~-----------~v~lW~~~~ 567 (611)
T 1nr0_A 532 WTFHTAKVACVSWSPDNVRLATGSLDN-----------SVIVWNMNK 567 (611)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTS-----------CEEEEETTC
T ss_pred eeecccceeEEEECCCCCEEEEEECCC-----------cEEEEECCC
Confidence 345999999999999999999999776 588887764
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-38 Score=282.55 Aligned_cols=289 Identities=18% Similarity=0.242 Sum_probs=222.9
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~- 92 (342)
.+|.+.|++++|+|++++|++++.||+|+|||+.+++... ...|...|.+++|++++. +++++.|+.|++|++.+++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 6899999999999999999999999999999998776544 457999999999997765 5689999999999998877
Q ss_pred eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEe
Q 019384 93 EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYD 172 (342)
Q Consensus 93 ~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd 172 (342)
...+.+|...|.+++|+|++++|++|+.|++|++||+++... ...+..+......+.++.+++.+++++.|+.|++||
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE--EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 456788999999999999999999999999999999975432 122222222223334455667899999999999999
Q ss_pred CCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc
Q 019384 173 LRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH 252 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s 252 (342)
+++...... ........+.+++++|+++.+++++.++.+ ++||....... ..+..|... ...+......
T Consensus 178 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i--~iwd~~~~~~~--~~~~~~~~~------~~~~~~~~~~ 246 (312)
T 4ery_A 178 TASGQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTL--KLWDYSKGKCL--KTYTGHKNE------KYCIFANFSV 246 (312)
T ss_dssp TTTCCEEEE-ECCSSCCCEEEEEECTTSSEEEEEETTTEE--EEEETTTTEEE--EEECSSCCS------SSCCCEEEEC
T ss_pred CCCCceeeE-EeccCCCceEEEEECCCCCEEEEEcCCCeE--EEEECCCCcEE--EEEEecCCc------eEEEEEEEEe
Confidence 987643222 112223457789999999999999999976 45998654322 222333221 0112333344
Q ss_pred CCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 253 PIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 253 p~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
+++.+|++|+.||+|++||+++++.+..+.+|...|.+++|+|++.+|++++... ++ .|.+|+.+
T Consensus 247 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~--d~-------~i~~W~~d 311 (312)
T 4ery_A 247 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALEN--DK-------TIKLWKSD 311 (312)
T ss_dssp SSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTT--TC-------CEEEEECC
T ss_pred CCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccC--Cc-------cEEEecCC
Confidence 6788999999999999999999999999999999999999999999999987421 12 48888753
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.2e-39 Score=313.64 Aligned_cols=286 Identities=17% Similarity=0.215 Sum_probs=219.0
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee--------ecCCceEEEEEeCCCC-eEEEecCCcEEEE
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF--------MHGGPVLDCCFHDDSS-GFSASADHTVRRL 86 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~--------~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w 86 (342)
.+|.+.|++++|+|++++||||+.|++|+|||+.+++....+ +|.+.|.+++|+|++. +++++.|++|++|
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 266 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 579999999999999999999999999999999877655444 6999999999998776 5699999999999
Q ss_pred EeccCce--------------------------------------------eecccCCcceeEEEEeCCCCEEEEeeCCC
Q 019384 87 VFSHGKE--------------------------------------------DILGKHDAPVRCIEYSYAAGQVITGSWDK 122 (342)
Q Consensus 87 ~~~~~~~--------------------------------------------~~~~~h~~~V~~~~~~~~~~~l~sgs~D~ 122 (342)
|+.+++. ..+.+|...|++++|+|++++|++++.|+
T Consensus 267 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 267 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp ETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 9876542 12357999999999999999999999999
Q ss_pred cEEEEcCCCCCCccee---------eee----------------------------------------------------
Q 019384 123 SLKCWDPRGASGQERT---------LVG---------------------------------------------------- 141 (342)
Q Consensus 123 ~I~iWd~~~~~~~~~~---------~~~---------------------------------------------------- 141 (342)
+|++||++++...... .+.
T Consensus 347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~ 426 (611)
T 1nr0_A 347 HINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIA 426 (611)
T ss_dssp CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCE
T ss_pred cEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEE
Confidence 9999998753210000 000
Q ss_pred -------------------ecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCce
Q 019384 142 -------------------TYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTG 202 (342)
Q Consensus 142 -------------------~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 202 (342)
.+......+++++++..+++++.|++|++||+.......... ..+...+.+++|+|+++.
T Consensus 427 ~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~ 505 (611)
T 1nr0_A 427 VAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAF 505 (611)
T ss_dssp EEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSE
T ss_pred EEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCE
Confidence 000011223455667799999999999999997642211111 233456889999999999
Q ss_pred EEEEccCCeEEEEEeechhhhhcccc-eeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCce-ee-e
Q 019384 203 YALSSVEGRVAMEFFDLSEASQAKKY-AFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKK-RL-Y 279 (342)
Q Consensus 203 ~~~~s~~~~~~i~~~d~~~~~~~~~~-~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~-~~-~ 279 (342)
+++++.|+.+. +||.......... ....|. ..|.+|+|+|++++|++|+.|++|+|||++++. .+ .
T Consensus 506 las~s~d~~v~--~w~~~~~~~~~~~~~~~~H~---------~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~ 574 (611)
T 1nr0_A 506 LVATDQSRKVI--PYSVANNFELAHTNSWTFHT---------AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 574 (611)
T ss_dssp EEEEETTSCEE--EEEGGGTTEESCCCCCCCCS---------SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEE
T ss_pred EEEEcCCCCEE--EEEcCCCCceeeeeeeeecc---------cceeEEEECCCCCEEEEEECCCcEEEEECCCcccccch
Confidence 99999999875 5888642221111 112233 369999999999999999999999999998754 33 5
Q ss_pred ccCCC-CcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEc
Q 019384 280 QYSKY-PTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSV 325 (342)
Q Consensus 280 ~~~~~-~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~ 325 (342)
.+.+| ...|++++|+||++ |++++.+. .|.+|++
T Consensus 575 ~~~~h~~~~v~~v~fs~d~~-l~s~~~D~-----------~i~lW~~ 609 (611)
T 1nr0_A 575 IKGAHAMSSVNSVIWLNETT-IVSAGQDS-----------NIKFWNV 609 (611)
T ss_dssp ETTSSTTSCEEEEEEEETTE-EEEEETTS-----------CEEEEEC
T ss_pred hhccCcccCeeEEEEcCCCE-EEEecCCC-----------CEEEEec
Confidence 67789 89999999999999 89888766 5888875
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-38 Score=286.77 Aligned_cols=282 Identities=17% Similarity=0.190 Sum_probs=212.1
Q ss_pred CCCCCCeEEEEE-----cC-CCCeEEEEeCCCcEEEEECCCce--------eeeeeecCCceEEEEEeCCCC-eEEEecC
Q 019384 16 NPPSDGISNLRF-----SN-HSDHLLVSSWDKSVRLYDASANV--------LRGEFMHGGPVLDCCFHDDSS-GFSASAD 80 (342)
Q Consensus 16 ~~~~~~V~~l~f-----s~-~~~~l~s~s~Dgti~vwd~~~~~--------~~~~~~h~~~V~~~~~~~~~~-~~s~s~D 80 (342)
.+|.+.|++++| ++ ++++|+||+.|++|+|||+..+. .....+|.+.|.+++|++++. +++++.|
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD 97 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC
Confidence 579999999999 76 89999999999999999986431 233457999999999997766 4699999
Q ss_pred CcEEEEEeccCce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC---
Q 019384 81 HTVRRLVFSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG--- 156 (342)
Q Consensus 81 ~~i~~w~~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~--- 156 (342)
++|++||+.+++. ..+.+|...|.+++|+|++++|++++.|++|++||+..... ........+...+.++.+.+
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK--FSSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE--EECCTTTSCSSCEEEEEECCCCC
T ss_pred CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce--eeeecccCCCceeeeeeeccccc
Confidence 9999999988774 46789999999999999999999999999999999863211 11111112333455554433
Q ss_pred ---------CeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccc
Q 019384 157 ---------NRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKK 227 (342)
Q Consensus 157 ---------~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~ 227 (342)
..+++++.|++|++||.... . ......+...+.+++++|+++.+++++.|+.+. +||+.......
T Consensus 176 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~-~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~--iwd~~~~~~~~- 249 (343)
T 2xzm_R 176 SANKVQPFAPYFASVGWDGRLKVWNTNFQ--I-RYTFKAHESNVNHLSISPNGKYIATGGKDKKLL--IWDILNLTYPQ- 249 (343)
T ss_dssp SCSCCCSSCCEEEEEETTSEEEEEETTTE--E-EEEEECCSSCEEEEEECTTSSEEEEEETTCEEE--EEESSCCSSCS-
T ss_pred cccccCCCCCEEEEEcCCCEEEEEcCCCc--e-eEEEcCccccceEEEECCCCCEEEEEcCCCeEE--EEECCCCcccc-
Confidence 47899999999999995321 1 111123345688999999999999999999764 59974321111
Q ss_pred ceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeee--ccC-----------CCCcceEEEEEC
Q 019384 228 YAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLY--QYS-----------KYPTSIAALSFS 294 (342)
Q Consensus 228 ~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~--~~~-----------~~~~~V~~v~~s 294 (342)
..+. + ...|.+++|+|++.+|++| .|+.|++||+.+++... .+. +|...|.+++|+
T Consensus 250 ~~~~-~---------~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 250 REFD-A---------GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp EEEE-C---------SSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred eeec-C---------CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 1111 1 1258999999999877655 58899999988755432 332 688899999999
Q ss_pred CCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 295 RDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 295 pdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
|||++|++|+.++ .|.+|+++.
T Consensus 319 p~g~~l~sg~~Dg-----------~v~~w~~~~ 340 (343)
T 2xzm_R 319 ALGKKLFAGFTDG-----------VIRTFSFET 340 (343)
T ss_dssp SSSCCEEEEETTS-----------EEEEEEEEE
T ss_pred CCCCeEEEecCCc-----------eEEEEEEEc
Confidence 9999999998776 588887753
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.6e-38 Score=282.04 Aligned_cols=278 Identities=21% Similarity=0.273 Sum_probs=215.6
Q ss_pred CCCCCCeEEEEEcCCC-CeEEEEeCCCcEEEEECCCc------eeeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEE
Q 019384 16 NPPSDGISNLRFSNHS-DHLLVSSWDKSVRLYDASAN------VLRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLV 87 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~-~~l~s~s~Dgti~vwd~~~~------~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~ 87 (342)
.+|.+.|++|+|+|++ ++|+|||.|++|++||+... .+....+|.+.|.+++|++++. +++++.|++|++||
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 6899999999999965 89999999999999998532 1334568999999999997765 56999999999999
Q ss_pred eccCce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC--------Ce
Q 019384 88 FSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG--------NR 158 (342)
Q Consensus 88 ~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~--------~~ 158 (342)
+.+++. ..+.+|...|.+++|+|++..|++|+.|++|++||++.. ....+. .+...+..+.+.+ ..
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---CLATLL--GHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC---EEEEEC--CCSSCEEEEEECCC------CCE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEe--ccCCcEEEEEEccCCCCCCCccE
Confidence 998874 567899999999999999999999999999999998632 112222 2334454454432 37
Q ss_pred EEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCC
Q 019384 159 LVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEA 238 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~ 238 (342)
+++++.|++|++||+++...... ...+...+.+++++|+++.+++++.|+.+. +||....... ..+..+
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~--iwd~~~~~~~--~~~~~~----- 237 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDGEIM--LWNLAAKKAM--YTLSAQ----- 237 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCEEE--EEETTTTEEE--EEEECC-----
T ss_pred EEEEeCCCEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCCeEE--EEECCCCcEE--EEecCC-----
Confidence 89999999999999987532211 123345688999999999999999999764 5998654322 222221
Q ss_pred CCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC--------CCCcceEEEEECCCCCEEEEEEeccccC
Q 019384 239 GRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS--------KYPTSIAALSFSRDGRLLAVASSYTFEE 310 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~--------~~~~~V~~v~~spdg~~las~s~~~~~~ 310 (342)
.+|.+++|+|++.+|++++.+ .+++|+.+....+..+. .|...+.+++|||||++|++|+.+.
T Consensus 238 -----~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg--- 308 (319)
T 3frx_A 238 -----DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN--- 308 (319)
T ss_dssp -----SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS---
T ss_pred -----CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCc---
Confidence 258999999999999888754 69999998776554432 2456789999999999999998776
Q ss_pred CCCCCCCCcEEEEEcc
Q 019384 311 GDKPHEPDAIFVRSVN 326 (342)
Q Consensus 311 ~~~~~~~~~~~~~~~~ 326 (342)
.|.+|++.
T Consensus 309 --------~i~vWd~~ 316 (319)
T 3frx_A 309 --------VIRVWQVM 316 (319)
T ss_dssp --------CEEEEEEE
T ss_pred --------eEEEEEEe
Confidence 58888764
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-38 Score=290.40 Aligned_cols=285 Identities=18% Similarity=0.242 Sum_probs=219.1
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee-ec------------------CCceEEEEEeCCCC-eEE
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF-MH------------------GGPVLDCCFHDDSS-GFS 76 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~-~h------------------~~~V~~~~~~~~~~-~~s 76 (342)
.|...|++++|+|||++||+|+ |++++||++.++.....+ .| ...|.+++|++++. +++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 4889999999999999999876 789999999887654433 22 22489999997765 568
Q ss_pred EecCCcEEEEEeccCce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec-
Q 019384 77 ASADHTVRRLVFSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL- 154 (342)
Q Consensus 77 ~s~D~~i~~w~~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~- 154 (342)
++.|++|++||+.+++. ..+.+|...|.+++|+|++++|++++.|++|++||++++.. ...+. .........++.
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEE-CSSCEEEEEECST
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEEE-cCCCcEEEEEECC
Confidence 99999999999988774 46789999999999999999999999999999999976432 11121 222223334444
Q ss_pred cCCeEEEEEcCCeEEEEeCCCCCCccccc-----ccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcc---
Q 019384 155 VGNRLVVATAGRHVNVYDLRNMSQPEQRR-----ESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAK--- 226 (342)
Q Consensus 155 ~~~~~~~~s~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~--- 226 (342)
+++.+++++.|+.|++||++++....... ...+...+.+++++|+++.+++++.|+.+. +||+.......
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~--~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK--LWNLQNANNKSDSK 295 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE--EEEC----------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE--EEECCCCCCccccc
Confidence 56789999999999999998764321110 012344688999999999999999999865 58876432111
Q ss_pred -------cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECC----
Q 019384 227 -------KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSR---- 295 (342)
Q Consensus 227 -------~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~sp---- 295 (342)
...+.+|. ..|.+++|+|++.+|++|+.|++|++||.++++.+..+.+|...|.+++|+|
T Consensus 296 ~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 296 TPNSGTCEVTYIGHK---------DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSL 366 (393)
T ss_dssp -----CEEEEEECCS---------SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTT
T ss_pred CCCCCcceEEEeccc---------CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCc
Confidence 11222232 3589999999999999999999999999999999999999999999999986
Q ss_pred --CCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 296 --DGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 296 --dg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
++.+||+|+.+. .|.+|++..
T Consensus 367 ~p~~~~l~sgs~Dg-----------~i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDC-----------KARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTS-----------EEEEEEEEE
T ss_pred CCCCCEEEEECCCC-----------cEEECcccc
Confidence 788999999877 689998753
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-38 Score=281.42 Aligned_cols=291 Identities=14% Similarity=0.128 Sum_probs=203.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc--eeeeee--e-cCCceEEEEEeCCCC-eEEEecCCcEEEEEec
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN--VLRGEF--M-HGGPVLDCCFHDDSS-GFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~--~~~~~~--~-h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~ 89 (342)
..|.+.|++++|+++ +||||+.|++|+|||+..+ .+...+ . |.+.|.+++|+|++. +++++.|++|++|++.
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence 579999999999987 9999999999999999764 333332 3 999999999998776 4689999999999985
Q ss_pred cCc--------eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCC--cceeeeeecCCCCcEEEEe--ccCC
Q 019384 90 HGK--------EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASG--QERTLVGTYPQPERVYSLS--LVGN 157 (342)
Q Consensus 90 ~~~--------~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~--~~~~~~~~~~~~~~v~~~s--~~~~ 157 (342)
... ...+.+|...|.+++|+|++++|+||+.|++|++||++.... .....+.. +...+.++. ++++
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE--HSQDVKHVIWHPSEA 166 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC--CSSCEEEEEECSSSS
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc--CCCceEEEEECCCCC
Confidence 321 235678999999999999999999999999999999853221 11112222 334455544 4567
Q ss_pred eEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeC--CceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPN--GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
.+++++.|++|++||+++...........+...+.+++++|+ +..+++++.|+.+++ ||.................
T Consensus 167 ~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i--w~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV--WKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEE--EEEEEECTTSCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE--EEecCCCccccceeEEeee
Confidence 899999999999999875421111111233456788999998 667899999998754 8875431111000000000
Q ss_pred cCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCce--ee-eccCCCCc-ceEEEEECC--CCCEEEEEEecccc
Q 019384 236 SEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKK--RL-YQYSKYPT-SIAALSFSR--DGRLLAVASSYTFE 309 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~--~~-~~~~~~~~-~V~~v~~sp--dg~~las~s~~~~~ 309 (342)
. ...+..+|.+++|+++ .+|++|+.||+|+|||..++. .+ ..+.+|.. .|++++|+| |+++||+|+.+.
T Consensus 245 ~--~~~h~~~v~~v~~s~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg-- 319 (330)
T 2hes_X 245 L--PDVHKRQVYNVAWGFN-GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG-- 319 (330)
T ss_dssp C--CSCCSSCEEEEEECTT-SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS--
T ss_pred c--ccccccceEEEEEcCC-CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC--
Confidence 0 0112346999999975 489999999999999988763 33 23467887 899999999 799999999876
Q ss_pred CCCCCCCCCcEEEEEcc
Q 019384 310 EGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 310 ~~~~~~~~~~~~~~~~~ 326 (342)
.|.+|+++
T Consensus 320 ---------~v~~W~~~ 327 (330)
T 2hes_X 320 ---------IVNFWSLE 327 (330)
T ss_dssp ---------EEEEEEC-
T ss_pred ---------cEEEEEec
Confidence 58889875
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.5e-37 Score=297.31 Aligned_cols=271 Identities=23% Similarity=0.278 Sum_probs=218.6
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCcee
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKED 94 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~~~ 94 (342)
..|...|++++|+|++++|++++.|++|++||.....+.....|...|.+++|++++.. ++++.|+.+++|+.......
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~ 379 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 379 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEE
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEE
Confidence 57889999999999999999999999999999988777777889999999999987765 68899999999997655456
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCC
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLR 174 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~ 174 (342)
.+.+|...|.+++|+|++++|++++.|++|++||... .....+..+......+.+++++..+++++.|++|++||+.
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~ 456 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN 456 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 7788999999999999999999999999999999642 1122233333232334455566789999999999999974
Q ss_pred CCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCC
Q 019384 175 NMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPI 254 (342)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~ 254 (342)
.. .. . ........+.+++++|+++.+++++.|+.+. +||... .....+.+|.. +|++++|+|+
T Consensus 457 ~~-~~-~-~~~~~~~~v~~~~~spd~~~las~~~d~~i~--iw~~~~---~~~~~~~~h~~---------~v~~l~~s~d 519 (577)
T 2ymu_A 457 GQ-LL-Q-TLTGHSSSVRGVAFSPDGQTIASASDDKTVK--LWNRNG---QLLQTLTGHSS---------SVRGVAFSPD 519 (577)
T ss_dssp SC-EE-E-EEECCSSCEEEEEECTTSCEEEEEETTSEEE--EEETTS---CEEEEEECCSS---------CEEEEEECTT
T ss_pred CC-EE-E-EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE--EEcCCC---CEEEEEeCCCC---------CEEEEEEcCC
Confidence 32 11 1 1123345678999999999999999999765 588531 22233444432 6999999999
Q ss_pred CCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 255 YGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 255 ~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
+++|++++.||+|+|||. +++++..+.+|...|++++|+|||++|++++.+.
T Consensus 520 g~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 999999999999999996 5678888999999999999999999999998766
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-36 Score=269.53 Aligned_cols=252 Identities=17% Similarity=0.235 Sum_probs=186.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc--e-eeeeeecCCceEEEEEeC---CCCeEEEecCCcEEEEEec
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN--V-LRGEFMHGGPVLDCCFHD---DSSGFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~--~-~~~~~~h~~~V~~~~~~~---~~~~~s~s~D~~i~~w~~~ 89 (342)
.+|.+.|++++|+|+|++||||+.|++|+|||+..+ + +....+|.++|.+++|++ +..+++++.|++|++|++.
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 579999999999999999999999999999999643 3 345568999999999974 3456799999999999998
Q ss_pred cCc---eeecccCCcceeEEEEeCC--CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC--------
Q 019384 90 HGK---EDILGKHDAPVRCIEYSYA--AGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG-------- 156 (342)
Q Consensus 90 ~~~---~~~~~~h~~~V~~~~~~~~--~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~-------- 156 (342)
++. ...+.+|...|.+++|+|+ +..|++++.|++|++||++.........+. .+...+.++++.+
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID--AHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE--CCSSCEEEEEECCCC------
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee--cccCccceEeecCCccccccc
Confidence 764 2346789999999999997 789999999999999998754221112222 2334455555543
Q ss_pred -------CeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccce
Q 019384 157 -------NRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYA 229 (342)
Q Consensus 157 -------~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 229 (342)
..+++++.|++|++||+++.... ......
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~--------------------------------------------~~~~~~ 199 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQT--------------------------------------------YVLEST 199 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTE--------------------------------------------EEEEEE
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCce--------------------------------------------EEEEEE
Confidence 35666666666777766442100 000011
Q ss_pred eeeEEecCCCCceeeeeeEEEEcCCC---CeEEEecCCCeEEEEeCCCce---eeecc--CCCCcceEEEEECCCCCEEE
Q 019384 230 FKCHRKSEAGRDIVYPVNAIAFHPIY---GTFATGGCDGFVNVWDGNNKK---RLYQY--SKYPTSIAALSFSRDGRLLA 301 (342)
Q Consensus 230 ~~~h~~~~~~~~~~~~v~~v~~sp~~---~~l~sgs~Dg~I~iWd~~~~~---~~~~~--~~~~~~V~~v~~spdg~~la 301 (342)
+.+|. .+|.+|+|+|++ .+|++|+.|++|+|||.++.. ....+ .+|...|++++|+|||++||
T Consensus 200 l~~H~---------~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 200 LEGHS---------DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp ECCCS---------SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred ecCCC---------CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEE
Confidence 23333 269999999984 789999999999999987632 11222 57888999999999999999
Q ss_pred EEEeccccCCCCCCCCCcEEEEEcc-CCccccC
Q 019384 302 VASSYTFEEGDKPHEPDAIFVRSVN-EIEVKPK 333 (342)
Q Consensus 302 s~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 333 (342)
+++.+. .|.+|+.. ++.+++.
T Consensus 271 s~~~D~-----------~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 271 LSGGDN-----------KVTLWKENLEGKWEPA 292 (297)
T ss_dssp EEETTS-----------CEEEEEECTTSCEEEC
T ss_pred EEcCCC-----------cEEEEEECCCCcEEec
Confidence 998766 58899876 4555543
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.7e-36 Score=267.17 Aligned_cols=282 Identities=21% Similarity=0.281 Sum_probs=214.1
Q ss_pred CCCCCCeEEEEEcCC-CCeEEEEeCCCcEEEEECCCce------eeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEE
Q 019384 16 NPPSDGISNLRFSNH-SDHLLVSSWDKSVRLYDASANV------LRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLV 87 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~-~~~l~s~s~Dgti~vwd~~~~~------~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~ 87 (342)
.+|.+.|++|+|+|+ +++|||||.|++|+|||+.... .....+|.+.|.+++|++++. +++++.|+.+++|+
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEe
Confidence 579999999999997 6899999999999999986532 234457999999999997766 56999999999999
Q ss_pred eccCce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEE--EEeccC--CeEEEE
Q 019384 88 FSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVY--SLSLVG--NRLVVA 162 (342)
Q Consensus 88 ~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~--~~s~~~--~~~~~~ 162 (342)
...... .....+...+..+.+++++..|++++.|+.+++||+..... .......+...+. .++.++ ..++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 115 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---YTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---EEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred ecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---EEEEeccccCcccceEEccCCCCcEEEEE
Confidence 887764 34566778889999999999999999999999999864321 1111122233343 444443 357889
Q ss_pred EcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCce
Q 019384 163 TAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDI 242 (342)
Q Consensus 163 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~ 242 (342)
+.|+.|++||+++...... .......+.+++++|+++.+++++.|+.+. +||....... ..+..+
T Consensus 192 ~~d~~i~i~d~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~--iwd~~~~~~~--~~~~~~--------- 256 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTN--HIGHTGYLNTVTVSPDGSLCASGGKDGQAM--LWDLNEGKHL--YTLDGG--------- 256 (340)
T ss_dssp ETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTCEEE--EEETTTTEEE--EEEECS---------
T ss_pred cCCCEEEEEECCCCceeeE--ecCCCCcEEEEEECCCCCEEEEEeCCCeEE--EEEeccCcee--eeecCC---------
Confidence 9999999999987643221 123345688999999999999999999764 5998654322 122211
Q ss_pred eeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeecc---------CCCCcceEEEEECCCCCEEEEEEeccccCCCC
Q 019384 243 VYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQY---------SKYPTSIAALSFSRDGRLLAVASSYTFEEGDK 313 (342)
Q Consensus 243 ~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~---------~~~~~~V~~v~~spdg~~las~s~~~~~~~~~ 313 (342)
..|.+++|+|++. +++++.|++|++||++++..+..+ .+|...|++++|+|||++|++|+.+.
T Consensus 257 -~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg------ 328 (340)
T 4aow_A 257 -DIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN------ 328 (340)
T ss_dssp -SCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS------
T ss_pred -ceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC------
Confidence 2588999999765 556667999999999887655443 46888999999999999999998776
Q ss_pred CCCCCcEEEEEccCC
Q 019384 314 PHEPDAIFVRSVNEI 328 (342)
Q Consensus 314 ~~~~~~~~~~~~~~~ 328 (342)
.|.+|+++.+
T Consensus 329 -----~v~iW~~~tG 338 (340)
T 4aow_A 329 -----LVRVWQVTIG 338 (340)
T ss_dssp -----CEEEEEEEC-
T ss_pred -----EEEEEeCCCc
Confidence 5999988654
No 22
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=271.59 Aligned_cols=293 Identities=17% Similarity=0.240 Sum_probs=220.0
Q ss_pred cCCCCCCCCeEEEEEcCCCCeEE-EEeC---CCcEEEEECCCceee--eeeecCCceEEEEEeCC----CCeEEEecCCc
Q 019384 13 ELGNPPSDGISNLRFSNHSDHLL-VSSW---DKSVRLYDASANVLR--GEFMHGGPVLDCCFHDD----SSGFSASADHT 82 (342)
Q Consensus 13 ~~~~~~~~~V~~l~fs~~~~~l~-s~s~---Dgti~vwd~~~~~~~--~~~~h~~~V~~~~~~~~----~~~~s~s~D~~ 82 (342)
.+...|.+.|++++|+|++..++ +++. |++|+|||+.++... ....|.+.|.+++|+++ ..+++++.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 34456999999999999997655 5655 999999999887643 34579999999999876 56789999999
Q ss_pred EEEEEeccCc--eeecccCCcceeEEEE------eCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCC--CCcEEEE
Q 019384 83 VRRLVFSHGK--EDILGKHDAPVRCIEY------SYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQ--PERVYSL 152 (342)
Q Consensus 83 i~~w~~~~~~--~~~~~~h~~~V~~~~~------~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~--~~~v~~~ 152 (342)
|++|++.+++ ...+.+|...|.+++| +|+++.|++++.|++|++||+++..... ..+..+.. ...+.++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV-ANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS-EEECCCTTSCCCCEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc-eeccccCCCCCCceEEE
Confidence 9999998776 4467889999999965 6788999999999999999998654221 22222221 2245554
Q ss_pred e------ccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEee---CCceEEEEccCCeEEEEEeechhhh
Q 019384 153 S------LVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYP---NGTGYALSSVEGRVAMEFFDLSEAS 223 (342)
Q Consensus 153 s------~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~s~~~~~~i~~~d~~~~~ 223 (342)
. .+++.+++++.|+.|++||+++.... ........+.+++++| ++..+++++.++.+. +||.+...
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~--i~d~~~~~ 245 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR---WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH--VFDMRTQH 245 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEE--EEEEEEEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCcee---eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE--EEeCcCCC
Confidence 4 46678999999999999999886432 1123345688999999 899999999999764 58886543
Q ss_pred hcccceeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCCc-------------------eeeeccCC
Q 019384 224 QAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNNK-------------------KRLYQYSK 283 (342)
Q Consensus 224 ~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~-------------------~~~~~~~~ 283 (342)
....+...... .+..+|.+++|+|++. +|++|+.||.|++||++++ +.+..+.+
T Consensus 246 ~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 246 PTKGFASVSEK------AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp TTTEEEEEEEE------CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC
T ss_pred cccceeeeccC------CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc
Confidence 33222211000 1123699999999998 8999999999999998743 35667888
Q ss_pred CCcceEEEEECCCCCEEE-EEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 284 YPTSIAALSFSRDGRLLA-VASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 284 ~~~~V~~v~~spdg~~la-s~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
|...|.+++|+|||++|+ +++.+. .|.+|++...
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~-----------~i~iw~~~~~ 354 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQ-----------TVRVLIVTKL 354 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTS-----------EEEEEEECC-
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCC-----------cEEEEECCCc
Confidence 999999999999999998 566555 5888987643
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=266.76 Aligned_cols=296 Identities=16% Similarity=0.149 Sum_probs=230.8
Q ss_pred CCCCCCccCC----CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee-eecCCceEEEEEeCCCC-eEEEec
Q 019384 6 PPPTSGRELG----NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFHDDSS-GFSASA 79 (342)
Q Consensus 6 ~~~~~~~~~~----~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~~~~~-~~s~s~ 79 (342)
+++..|..+. .+|.+.|++++|+|++++|++++.||+|+|||+.+++.... ..|.+.|.+++|++++. +++++.
T Consensus 15 ~~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 15 NLYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp CCCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC
Confidence 4444555444 48899999999999999999999999999999988765544 46999999999997665 568999
Q ss_pred CCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCC-----CcEEEEcCCCCCCcce---------eeeeecCC
Q 019384 80 DHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWD-----KSLKCWDPRGASGQER---------TLVGTYPQ 145 (342)
Q Consensus 80 D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D-----~~I~iWd~~~~~~~~~---------~~~~~~~~ 145 (342)
|+.|++|++.+++......|...|.+++|+|++..|++++.+ +.|++||++....... ..+..+..
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred CCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 999999999988755444488999999999999999999999 9999999865432110 11111112
Q ss_pred --CCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhh
Q 019384 146 --PERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAS 223 (342)
Q Consensus 146 --~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~ 223 (342)
......++.+++.+++++.|+.|++||+++........ ......+.+++++|++..+++++.++.+ ++||.....
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~v~d~~~~~ 251 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNS--FLVDVSTLQ 251 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEE--EEEETTTCC
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceE--EEEECCCCc
Confidence 22233455567789999999999999998732222222 1234467899999999999999999976 569986533
Q ss_pred hcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCC--------------eEEEEeCCCceeeeccCCCCcceE
Q 019384 224 QAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDG--------------FVNVWDGNNKKRLYQYSKYPTSIA 289 (342)
Q Consensus 224 ~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg--------------~I~iWd~~~~~~~~~~~~~~~~V~ 289 (342)
....+ . + ..++.+++|+|+++++++++.++ .+++||..+++.+..+.+|...|.
T Consensus 252 ~~~~~--~-~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~ 319 (369)
T 3zwl_B 252 VLKKY--E-T---------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLN 319 (369)
T ss_dssp EEEEE--E-C---------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEE
T ss_pred eeeee--c-C---------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEE
Confidence 22221 1 1 12588999999999999999988 899999999999999999999999
Q ss_pred EEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 290 ALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 290 ~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
+++|+|||++|++++.++ .|.+|+++.
T Consensus 320 ~~~~s~~~~~l~s~~~dg-----------~v~iw~~~~ 346 (369)
T 3zwl_B 320 TVAISPQGTSYASGGEDG-----------FIRLHHFEK 346 (369)
T ss_dssp EEEECTTSSEEEEEETTS-----------EEEEEEECH
T ss_pred EEEECCCCCEEEEEcCCC-----------eEEEEECcc
Confidence 999999999999998776 588998864
No 24
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-36 Score=276.11 Aligned_cols=281 Identities=8% Similarity=0.042 Sum_probs=202.6
Q ss_pred CeEEEEEcCCCCeEEEEeCCC-------cEEEEECCCce------e-----eeeeecCCceEEEEEeCCCCeE-------
Q 019384 21 GISNLRFSNHSDHLLVSSWDK-------SVRLYDASANV------L-----RGEFMHGGPVLDCCFHDDSSGF------- 75 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~Dg-------ti~vwd~~~~~------~-----~~~~~h~~~V~~~~~~~~~~~~------- 75 (342)
.|++++|+||+++|++||.|. +|+||++.... + ..+..|.+.|.++.+..+ .++
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~-~~~~g~~~~~ 94 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKG-IILVGCNENS 94 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETT-EEEEECCCCH
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCC-EEEEEECCCc
Confidence 599999999999999998754 59999986432 1 112357778888887533 223
Q ss_pred ----EEecCCcEEEEEeccCcee----------ecccCCcceeEEEEeCCCCEEE--EeeCCCcEEEEcCCCCCCcceee
Q 019384 76 ----SASADHTVRRLVFSHGKED----------ILGKHDAPVRCIEYSYAAGQVI--TGSWDKSLKCWDPRGASGQERTL 139 (342)
Q Consensus 76 ----s~s~D~~i~~w~~~~~~~~----------~~~~h~~~V~~~~~~~~~~~l~--sgs~D~~I~iWd~~~~~~~~~~~ 139 (342)
+++.|+.+|+|++...... ....+...+++++|+|||++++ +++.|++|+|||+++... ...
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~--~~~ 172 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE--KFE 172 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--EEE
T ss_pred cEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--EEE
Confidence 3456788999998765421 1124556799999999999875 566899999999976432 122
Q ss_pred eeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCe--EEEEEe
Q 019384 140 VGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR--VAMEFF 217 (342)
Q Consensus 140 ~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~--~~i~~~ 217 (342)
+. +......+++++++..+++++. +.+++|+..++..............+.+++|+|+++.+++++.++. +.++.|
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred eC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 22 3333444556666778887774 5577777766544333223334556889999999999999887764 456678
Q ss_pred echhhhhcc--cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec-cCCCCcceEEEEEC
Q 019384 218 DLSEASQAK--KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ-YSKYPTSIAALSFS 294 (342)
Q Consensus 218 d~~~~~~~~--~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~-~~~~~~~V~~v~~s 294 (342)
+........ ...+..| ..+|++++|+|+|++||+|+.|++|+|||+++++++.+ +.+|...|++|+||
T Consensus 251 ~~~~~~~~~~~~~~~~~~---------~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNR---------FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp EEETTEEEEEEEEEEESS---------CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC
T ss_pred ccccceecceeeeeecCC---------CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC
Confidence 764332111 1122222 23699999999999999999999999999999998877 57899999999999
Q ss_pred CCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 295 RDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 295 pdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
|||++||+||.+. .|.||++.
T Consensus 322 pdg~~laS~S~D~-----------tvrvw~ip 342 (365)
T 4h5i_A 322 PDSTYVASVSAAN-----------TIHIIKLP 342 (365)
T ss_dssp TTSCEEEEEETTS-----------EEEEEECC
T ss_pred CCCCEEEEEeCCC-----------eEEEEEcC
Confidence 9999999999877 68899873
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-35 Score=283.89 Aligned_cols=271 Identities=22% Similarity=0.277 Sum_probs=218.4
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCcee
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKED 94 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~ 94 (342)
..|...|++++|+|+++.|++++.|++|++||.....+....+|.+.|.+++|++++. +++++.|+++++|+.......
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~ 338 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ 338 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE
Confidence 5688999999999999999999999999999987766666678999999999998765 568999999999998877777
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCC
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLR 174 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~ 174 (342)
.+.+|...|.+++|+|+++.|++++.|++|++||... .....+..+......+.++.+++.+++++.|+.|++||..
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 7889999999999999999999999999999999642 1122233333333334555667789999999999999964
Q ss_pred CCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCC
Q 019384 175 NMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPI 254 (342)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~ 254 (342)
. +.. .. .......+.+++++|+++.+++++.|+.+. +||... .....+..|. .+|.+++|+|+
T Consensus 416 ~-~~~-~~-~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~--~w~~~~---~~~~~~~~~~---------~~v~~~~~spd 478 (577)
T 2ymu_A 416 G-QLL-QT-LTGHSSSVWGVAFSPDDQTIASASDDKTVK--LWNRNG---QLLQTLTGHS---------SSVRGVAFSPD 478 (577)
T ss_dssp C-CEE-EE-EECCSSCEEEEEECTTSSEEEEEETTSEEE--EEETTS---CEEEEEECCS---------SCEEEEEECTT
T ss_pred C-CEE-EE-ecCCCCCeEEEEECCCCCEEEEEcCCCEEE--EEECCC---CEEEEEcCCC---------CCEEEEEEcCC
Confidence 3 221 11 123344678899999999999999999764 588632 1222333343 26999999999
Q ss_pred CCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 255 YGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 255 ~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
+++|++++.|++|++||. +++.+..+.+|...|++++|||||++||+++.+.
T Consensus 479 ~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp SCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC
Confidence 999999999999999995 5678888999999999999999999999998754
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-35 Score=292.82 Aligned_cols=281 Identities=20% Similarity=0.257 Sum_probs=215.8
Q ss_pred CCCCCCeEEEEEcCCC-CeEEEEeCCCcEEEEECCCce------eeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEE
Q 019384 16 NPPSDGISNLRFSNHS-DHLLVSSWDKSVRLYDASANV------LRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLV 87 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~-~~l~s~s~Dgti~vwd~~~~~------~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~ 87 (342)
..|.+.|++|+|++++ ++|+|||.|++|+|||+.... .....+|.+.|.+++|++++. +++++.|++|++||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 5899999999999864 789999999999999986531 234568999999999997766 56999999999999
Q ss_pred eccCc-eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeee-ecCCCCcEEEEeccC----CeEEE
Q 019384 88 FSHGK-EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVG-TYPQPERVYSLSLVG----NRLVV 161 (342)
Q Consensus 88 ~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~-~~~~~~~v~~~s~~~----~~~~~ 161 (342)
+.++. ...+.+|...|.+++|+|++++|+||+.|++|++||+..... ..... ...+...+.++.+++ ..+++
T Consensus 459 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 536 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK--YTISEGGEGHRDWVSCVRFSPNTLQPTIVS 536 (694)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE--EEECSSTTSCSSCEEEEEECSCSSSCEEEE
T ss_pred CCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc--eeeccCCCCCCCcEEEEEEeCCCCcceEEE
Confidence 98876 356789999999999999999999999999999999753211 11111 112334455555543 36899
Q ss_pred EEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCc
Q 019384 162 ATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRD 241 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~ 241 (342)
++.|++|++||+++...... ...+...+.+++++|++..+++++.|+.+. +||+....... .+..
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~--iwd~~~~~~~~--~~~~--------- 601 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDGVVL--LWDLAEGKKLY--SLEA--------- 601 (694)
T ss_dssp EETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSBCE--EEETTTTEEEE--CCBC---------
T ss_pred EeCCCeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCCeEE--EEECCCCceEE--EecC---------
Confidence 99999999999987643221 223445688999999999999999999875 59986543221 1111
Q ss_pred eeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCC-------------------CcceEEEEECCCCCEEEE
Q 019384 242 IVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKY-------------------PTSIAALSFSRDGRLLAV 302 (342)
Q Consensus 242 ~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~-------------------~~~V~~v~~spdg~~las 302 (342)
...|.+++|+|++.+|++++ |+.|+|||+++++.+..+..+ ...|.+++|||||++|++
T Consensus 602 -~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 602 -NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp -SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred -CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence 12588999999988887765 567999999988877655422 124789999999999999
Q ss_pred EEeccccCCCCCCCCCcEEEEEcc
Q 019384 303 ASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 303 ~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
|+.++ .|.+|++.
T Consensus 680 gs~Dg-----------~i~iW~i~ 692 (694)
T 3dm0_A 680 GYTDG-----------VIRVWGIG 692 (694)
T ss_dssp EETTS-----------EEEEEEC-
T ss_pred EcCCC-----------eEEEEecc
Confidence 99877 68889875
No 27
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.3e-35 Score=269.75 Aligned_cols=288 Identities=15% Similarity=0.149 Sum_probs=215.9
Q ss_pred CCCCCCeEEEEEcCCC-CeEEEEeCCCcEEEEECCCceeeeee---ecCCceEEEEEeC-C-CCeEEEecCCcEEEEEec
Q 019384 16 NPPSDGISNLRFSNHS-DHLLVSSWDKSVRLYDASANVLRGEF---MHGGPVLDCCFHD-D-SSGFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~-~~l~s~s~Dgti~vwd~~~~~~~~~~---~h~~~V~~~~~~~-~-~~~~s~s~D~~i~~w~~~ 89 (342)
.+|...|++++|+|++ ++|++|+.||+|+|||+.++...... +|.+.|.+++|++ + ..+++++.|+.|++|++.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 5789999999999999 99999999999999999876544433 5999999999997 4 356799999999999998
Q ss_pred cCceeecc---cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCC-eEEEEE
Q 019384 90 HGKEDILG---KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGN-RLVVAT 163 (342)
Q Consensus 90 ~~~~~~~~---~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~-~~~~~s 163 (342)
......+. .|...|.+++|+|+++.|++|+.|++|++||++. .....+.. +...+.++.+ ++. .+++++
T Consensus 150 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 150 GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKL--HKAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEEC--SSSCEEEEEECSSCTTEEEEEE
T ss_pred CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEecc--CCCcEEEEEECCCCCCEEEEEe
Confidence 75554443 4558899999999999999999999999999842 12222333 3344555555 455 799999
Q ss_pred cCCeEEEEeCCCCCCcc-cccccccceeeEEEEEee-CCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCC--
Q 019384 164 AGRHVNVYDLRNMSQPE-QRRESSLKYQTRCVRCYP-NGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAG-- 239 (342)
Q Consensus 164 ~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~-- 239 (342)
.|+.|++||+++..... ..........+.+++++| ++..+++++.|+.+ ++||++..... ..+..|......
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i--~iwd~~~~~~~--~~~~~~~~~~~~~~ 300 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEI--RVYSSYDWSKP--DQIIIHPHRQFQHL 300 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEE--EEEETTBTTSC--SEEEECCBCCCTTS
T ss_pred CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcE--EEEECCCCccc--cccccccccccccc
Confidence 99999999998743211 111112345688999999 99999999999876 56998654332 223333221100
Q ss_pred Cc------eeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC--CCcceEEEEECCCCCEEEEEEeccccCC
Q 019384 240 RD------IVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK--YPTSIAALSFSRDGRLLAVASSYTFEEG 311 (342)
Q Consensus 240 ~~------~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s~~~~~~~ 311 (342)
.. ..+.+..++|+|++++ +|+.|++|++||+.+++.+..+.+ |...+.+++|+|||++|++++ ++
T Consensus 301 ~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~---- 373 (383)
T 3ei3_B 301 TPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF---- 373 (383)
T ss_dssp CCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT----
T ss_pred cceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC----
Confidence 00 0123455788888877 889999999999999998888876 457788889999999999996 43
Q ss_pred CCCCCCCcEEEEEcc
Q 019384 312 DKPHEPDAIFVRSVN 326 (342)
Q Consensus 312 ~~~~~~~~~~~~~~~ 326 (342)
.|.+|+++
T Consensus 374 -------~i~iw~~~ 381 (383)
T 3ei3_B 374 -------NILIWNRE 381 (383)
T ss_dssp -------EEEEEECC
T ss_pred -------cEEEEecC
Confidence 48999875
No 28
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.5e-35 Score=271.64 Aligned_cols=296 Identities=13% Similarity=0.133 Sum_probs=222.6
Q ss_pred CCCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce-------eeeeeecCCceEEEEEeCC----C----CeEEEe
Q 019384 14 LGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV-------LRGEFMHGGPVLDCCFHDD----S----SGFSAS 78 (342)
Q Consensus 14 ~~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~-------~~~~~~h~~~V~~~~~~~~----~----~~~s~s 78 (342)
....|.+.|++++|+| ++|++|+.||+|+|||+.++. ......|...|.+++|+++ + .+++++
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 3468999999999998 899999999999999998765 5566689999999999976 5 567999
Q ss_pred cCCcEEEEEeccCc------eeecccC-----CcceeEEEEe----CCCCE-EEEeeCCCcEEEEcCCC------CCCcc
Q 019384 79 ADHTVRRLVFSHGK------EDILGKH-----DAPVRCIEYS----YAAGQ-VITGSWDKSLKCWDPRG------ASGQE 136 (342)
Q Consensus 79 ~D~~i~~w~~~~~~------~~~~~~h-----~~~V~~~~~~----~~~~~-l~sgs~D~~I~iWd~~~------~~~~~ 136 (342)
.|+.|++|++.++. ...+..| ...|.+++|+ |+++. |++++.|+.|++||+++ .....
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 99999999998877 4566778 5899999999 99999 99999999999999875 32211
Q ss_pred ee---eeee-------cCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccc-ccc---ceeeEEEEEeeCCce
Q 019384 137 RT---LVGT-------YPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRE-SSL---KYQTRCVRCYPNGTG 202 (342)
Q Consensus 137 ~~---~~~~-------~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~-~~~---~~~~~~v~~~~~~~~ 202 (342)
.. .+.. +......+.++.++ .+++++.|+.|++||+++.+....... ... ...+.+++++|++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~ 247 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 247 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCE
Confidence 00 1211 22333444555566 899999999999999987533221111 002 456889999999999
Q ss_pred EEEEccC---CeEEEEEeechhhhhcccceeeeEE--e--cCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCc
Q 019384 203 YALSSVE---GRVAMEFFDLSEASQAKKYAFKCHR--K--SEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNK 275 (342)
Q Consensus 203 ~~~~s~~---~~~~i~~~d~~~~~~~~~~~~~~h~--~--~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~ 275 (342)
+++++.+ +.+ ++||....... ..+.... . ......+..+|.+++|+|++++|++|+.||.|++||++++
T Consensus 248 l~~~~~d~~~g~i--~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 248 LAIAHDSNSFGCI--TLYETEFGERI--GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEEEEEETTEEEE--EEEETTTCCEE--EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred EEEEecCCCCceE--EEEECCCCccc--ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999887 654 56998654322 2222200 0 0000002236999999999999999999999999999999
Q ss_pred eeeeccC------CC---------------CcceEEEEECCCC----------CEEEEEEeccccCCCCCCCCCcEEEEE
Q 019384 276 KRLYQYS------KY---------------PTSIAALSFSRDG----------RLLAVASSYTFEEGDKPHEPDAIFVRS 324 (342)
Q Consensus 276 ~~~~~~~------~~---------------~~~V~~v~~spdg----------~~las~s~~~~~~~~~~~~~~~~~~~~ 324 (342)
+.+..+. +| ...|.+++|+||| ++|++++.++ .|.+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg-----------~i~iw~ 392 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR-----------SIRWFR 392 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT-----------EEEEEE
T ss_pred ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC-----------cEEEEE
Confidence 9888888 77 8999999999999 7999998776 588888
Q ss_pred ccC
Q 019384 325 VNE 327 (342)
Q Consensus 325 ~~~ 327 (342)
+..
T Consensus 393 ~~~ 395 (397)
T 1sq9_A 393 EAG 395 (397)
T ss_dssp EEC
T ss_pred cCC
Confidence 753
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.9e-35 Score=259.85 Aligned_cols=276 Identities=17% Similarity=0.204 Sum_probs=217.0
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee----eee--eecCCceEEEEEeCCCC-eEEEecCCcEEEEEe
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL----RGE--FMHGGPVLDCCFHDDSS-GFSASADHTVRRLVF 88 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~----~~~--~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~ 88 (342)
..|.+.|++++|+|++++|++++ ||+|+|||+.++.. ... ..|.+.|.+++|++++. +++++.|+.+++|++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 36889999999999999999998 99999999976431 111 26899999999997776 568899999999999
Q ss_pred ccCc---eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEE--eccCCeEEEEE
Q 019384 89 SHGK---EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSL--SLVGNRLVVAT 163 (342)
Q Consensus 89 ~~~~---~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~~~~~s 163 (342)
.+++ ...+..|...|.+++|+|+++.|++++.|+.|++||+++... ...+.. +...+.++ +.+++.+++++
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQG--HTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECC--CSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce--eeeeec--ccCceEEEEECCCCCEEEEEe
Confidence 8876 235678999999999999999999999999999999975422 122222 33345444 44667899999
Q ss_pred cCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCcee
Q 019384 164 AGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIV 243 (342)
Q Consensus 164 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~ 243 (342)
.|+.|++||+++.+.... ......+.+++++|+++.+++++.++.+. +||..... ...+..|.
T Consensus 203 ~dg~i~~~d~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~~~~i~--~~~~~~~~---~~~~~~~~--------- 265 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQ---HDFTSQIFSLGYCPTGEWLAVGMESSNVE--VLHVNKPD---KYQLHLHE--------- 265 (337)
T ss_dssp TTSEEEEEETTTTEEEEE---EECSSCEEEEEECTTSSEEEEEETTSCEE--EEETTSSC---EEEECCCS---------
T ss_pred cCCcEEEEECCCCceEee---ecCCCceEEEEECCCCCEEEEEcCCCcEE--EEECCCCC---eEEEcCCc---------
Confidence 999999999987643221 12334578899999999999999998764 58885432 12233332
Q ss_pred eeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEE
Q 019384 244 YPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVR 323 (342)
Q Consensus 244 ~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~ 323 (342)
.+|.+++|+|++++|++++.||.|++||.++++.+... .|...|.+++|+||+++|++++.++ .|.+|
T Consensus 266 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg-----------~i~iw 333 (337)
T 1gxr_A 266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDK-----------KATVY 333 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTS-----------CEEEE
T ss_pred cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCC-----------eEEEE
Confidence 36999999999999999999999999999988776443 4788999999999999999998765 47777
Q ss_pred Ec
Q 019384 324 SV 325 (342)
Q Consensus 324 ~~ 325 (342)
++
T Consensus 334 ~~ 335 (337)
T 1gxr_A 334 EV 335 (337)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=276.42 Aligned_cols=287 Identities=14% Similarity=0.159 Sum_probs=220.5
Q ss_pred CCCCeEEEEEcCCCC-eEEEE----------eCCCcEEEEECCCce---eeeeeecCCceEEEEEeCCCC-eEEEecCCc
Q 019384 18 PSDGISNLRFSNHSD-HLLVS----------SWDKSVRLYDASANV---LRGEFMHGGPVLDCCFHDDSS-GFSASADHT 82 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~-~l~s~----------s~Dgti~vwd~~~~~---~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~ 82 (342)
+...|.+++|+|+++ +|+++ +.|++|+|||+.++. ......|.+.|.+++|++++. +++++.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 345789999999987 89999 899999999998764 455567999999999997665 568899999
Q ss_pred EEEEEecc----C-ceeecccCCcceeEEEEeCC-CCEEEEeeCCCcEEEEcCCCCCC-----cceee--eeecCCCCcE
Q 019384 83 VRRLVFSH----G-KEDILGKHDAPVRCIEYSYA-AGQVITGSWDKSLKCWDPRGASG-----QERTL--VGTYPQPERV 149 (342)
Q Consensus 83 i~~w~~~~----~-~~~~~~~h~~~V~~~~~~~~-~~~l~sgs~D~~I~iWd~~~~~~-----~~~~~--~~~~~~~~~v 149 (342)
|++|++.. . ....+.+|...|.+++|+|+ +.+|++++.|++|++||+++... ..... ...+......
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 2 24567889999999999998 78999999999999999986541 01111 1122223334
Q ss_pred EEEecc-CCeEEEEEcCCeEEEEeCCCCCCccccccccc-----ceeeEEEEEeeCC-ceEEEEccCC---eEEEEEeec
Q 019384 150 YSLSLV-GNRLVVATAGRHVNVYDLRNMSQPEQRRESSL-----KYQTRCVRCYPNG-TGYALSSVEG---RVAMEFFDL 219 (342)
Q Consensus 150 ~~~s~~-~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~-~~~~~~s~~~---~~~i~~~d~ 219 (342)
+.++.+ +..+++++.|+.|++||+++.+..... .... ...+.+++++|++ ..+++++.++ .+ ++||.
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i--~~~d~ 247 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI--LIWDL 247 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC--CEEET
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEE-eccccccccCCceEEEEECCCCCCEEEEEECCCCCceE--EEEeC
Confidence 445555 568899999999999999876432221 1111 4568899999997 5788888876 65 56998
Q ss_pred hhhhhcccceee-eEEecCCCCceeeeeeEEEEcC-CCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCC
Q 019384 220 SEASQAKKYAFK-CHRKSEAGRDIVYPVNAIAFHP-IYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDG 297 (342)
Q Consensus 220 ~~~~~~~~~~~~-~h~~~~~~~~~~~~v~~v~~sp-~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg 297 (342)
+.... ....+. .|. ..|.+++|+| ++.+|++|+.||+|++||+++++.+..+.+|...|.+++|+||+
T Consensus 248 ~~~~~-~~~~~~~~~~---------~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 248 RNANT-PLQTLNQGHQ---------KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp TSTTS-CSBCCCSCCS---------SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTC
T ss_pred CCCCC-CcEEeecCcc---------CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCC
Confidence 65322 122233 333 3699999999 89999999999999999999999999999999999999999999
Q ss_pred -CEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 298 -RLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 298 -~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
++|++++.+. .|.+|++...
T Consensus 318 ~~~l~s~~~d~-----------~i~iw~~~~~ 338 (416)
T 2pm9_A 318 PDLFACASFDN-----------KIEVQTLQNL 338 (416)
T ss_dssp TTEEEECCSSS-----------EEEEEESCCC
T ss_pred CCEEEEEecCC-----------cEEEEEccCC
Confidence 7999888765 4777877643
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.3e-36 Score=278.29 Aligned_cols=289 Identities=18% Similarity=0.216 Sum_probs=205.0
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCce---eeeeeecCCceEEEEEeC-CC-CeEEEecCCcEEEEEec
Q 019384 16 NPPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASANV---LRGEFMHGGPVLDCCFHD-DS-SGFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~---~~~~~~h~~~V~~~~~~~-~~-~~~s~s~D~~i~~w~~~ 89 (342)
.+|...|++|+|+| ++++||+|+.||+|+|||+.++. .....+|.+.|++++|+| ++ .+++|+.|++|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46788999999999 56789999999999999997653 333457999999999985 44 56799999999999998
Q ss_pred cCceeecc---cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc--CC-eEEEEE
Q 019384 90 HGKEDILG---KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--GN-RLVVAT 163 (342)
Q Consensus 90 ~~~~~~~~---~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--~~-~~~~~s 163 (342)
+.....+. .+...+.+++|+|++.+|++|+.|++|++||++... ...+.. +...+.++.++ ++ .+++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---~~~~~~--h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---LWNLRM--HKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---CCCSBC--CSSCEEEEEECTTCSSEEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---eEEEec--ccceEEeeeecCCCceEEEEec
Confidence 76644433 234567899999999999999999999999986421 112222 34456666654 33 678899
Q ss_pred cCCeEEEEeCCCCCCccccc-ccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCce
Q 019384 164 AGRHVNVYDLRNMSQPEQRR-ESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDI 242 (342)
Q Consensus 164 ~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~ 242 (342)
.|++|++||+++........ ...+...+.+++|+|++..+++++.|+.+. +||....... ..+..|..... ..
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~--iwd~~~~~~~--~~~~~~~~~~~--~~ 344 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR--VYSASQWDCP--LGLIPHPHRHF--QH 344 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE--EEESSSSSSE--EEECCCCCCCC--SS
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE--EEECCCCccc--eEEeccccccc--cc
Confidence 99999999998765432211 123345678999999999999999999875 5988643222 11222221100 00
Q ss_pred eeeeeEEEEcCCCCeEEEec------------CCCeEEEEeCCCceeeeccC-CCCcceEEE-EECCCCCEEEEEEeccc
Q 019384 243 VYPVNAIAFHPIYGTFATGG------------CDGFVNVWDGNNKKRLYQYS-KYPTSIAAL-SFSRDGRLLAVASSYTF 308 (342)
Q Consensus 243 ~~~v~~v~~sp~~~~l~sgs------------~Dg~I~iWd~~~~~~~~~~~-~~~~~V~~v-~~spdg~~las~s~~~~ 308 (342)
. .+..++|+|++..+++++ .+++|++||..+++.+..+. +|...|.++ +|||||++||+|+ ++
T Consensus 345 ~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~- 421 (435)
T 4e54_B 345 L-TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GY- 421 (435)
T ss_dssp S-CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SS-
T ss_pred c-eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CC-
Confidence 0 122334555555544442 45689999999998887654 688888887 6999999999875 33
Q ss_pred cCCCCCCCCCcEEEEEccCC
Q 019384 309 EEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~ 328 (342)
.|.+|+++++
T Consensus 422 ----------~i~iW~~~~g 431 (435)
T 4e54_B 422 ----------HILIWSQQEA 431 (435)
T ss_dssp ----------EEEECCCC--
T ss_pred ----------cEEEEECCcC
Confidence 4889988654
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=266.40 Aligned_cols=241 Identities=18% Similarity=0.183 Sum_probs=181.9
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-----eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEecc
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-----GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSH 90 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-----~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~ 90 (342)
.+..+|++++|+|++ +|++|+.||+|+|||+.+++.. ...+|.+.|.+++|++++. +++++.|++|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 346789999999985 7889999999999999876422 2347999999999997765 56999999999999998
Q ss_pred Cce-eecccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc---CCeEEEEEcC
Q 019384 91 GKE-DILGKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV---GNRLVVATAG 165 (342)
Q Consensus 91 ~~~-~~~~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~---~~~~~~~s~d 165 (342)
++. ..+.+|...|++++|++++ ..|+||+.|++|++||++++... ..+....+...+.++.+. ++.+++++.|
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEEeccC
Confidence 874 5678999999999999987 47899999999999999865432 222222222334455543 3468889999
Q ss_pred CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCc-eEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceee
Q 019384 166 RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGT-GYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVY 244 (342)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~ 244 (342)
++|++||+++++..... ..+...+.+++|+|++. .+++++.|+.++ +||..... ...+.+|. .
T Consensus 237 g~v~~wd~~~~~~~~~~--~~h~~~v~~v~fsp~g~~~lasgs~D~~i~--vwd~~~~~---~~~~~~H~---------~ 300 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSS--AVHSQCVTGLVFSPHSVPFLASLSEDCSLA--VLDSSLSE---LFRSQAHR---------D 300 (344)
T ss_dssp SEEEEEESCC--CCEEE--ECCSSCEEEEEECSSSSCCEEEEETTSCEE--EECTTCCE---EEEECCCS---------S
T ss_pred CcEEEEECCCCcEEEEE--cCCCCCEEEEEEccCCCeEEEEEeCCCeEE--EEECCCCc---EEEEcCCC---------C
Confidence 99999999987543222 23345688999999984 688999999875 59985432 22334443 3
Q ss_pred eeeEEEEcCCCC-eEEEecCCCeEEEEeCCCce
Q 019384 245 PVNAIAFHPIYG-TFATGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 245 ~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~ 276 (342)
.|++|+|+|+++ +|++|+.|++|++|++.+..
T Consensus 301 ~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 301 FVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 699999999987 56799999999999988643
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-35 Score=267.67 Aligned_cols=293 Identities=15% Similarity=0.178 Sum_probs=215.9
Q ss_pred CCCCCc---cCCCCCCCCeEEEEEcCC----CCeEEEEeCCCcEEEEECCCceeeeee------ecCCceEEEEEeCCC-
Q 019384 7 PPTSGR---ELGNPPSDGISNLRFSNH----SDHLLVSSWDKSVRLYDASANVLRGEF------MHGGPVLDCCFHDDS- 72 (342)
Q Consensus 7 ~~~~~~---~~~~~~~~~V~~l~fs~~----~~~l~s~s~Dgti~vwd~~~~~~~~~~------~h~~~V~~~~~~~~~- 72 (342)
||...+ .+.+.|...|++++|+|+ ...+++++.|+.|+|||+.++.....+ .|.+.|.+++|+++.
T Consensus 3 ~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 82 (366)
T 3k26_A 3 CKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSN 82 (366)
T ss_dssp --CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTT
T ss_pred ceeEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCC
Confidence 555555 456789999999999984 456777777889999999865433222 266889999998662
Q ss_pred ----CeEEEecCCcEEEEEeccCce-eecccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCCcceeeeee-cCC
Q 019384 73 ----SGFSASADHTVRRLVFSHGKE-DILGKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASGQERTLVGT-YPQ 145 (342)
Q Consensus 73 ----~~~s~s~D~~i~~w~~~~~~~-~~~~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~-~~~ 145 (342)
.+++++.|+.|++|++.+++. ..+.+|...|.+++|+| ++..|++|+.|++|++||+++... ...+.. ..+
T Consensus 83 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~ 160 (366)
T 3k26_A 83 TSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL--VAIFGGVEGH 160 (366)
T ss_dssp TCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE--EEEECSTTSC
T ss_pred CCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE--EEEecccccc
Confidence 367999999999999988773 45778999999999999 889999999999999999975432 122211 123
Q ss_pred CCcEEEEec--cCCeEEEEEcCCeEEEEeCCCCCCcccccc--------------------------cccceeeEEEEEe
Q 019384 146 PERVYSLSL--VGNRLVVATAGRHVNVYDLRNMSQPEQRRE--------------------------SSLKYQTRCVRCY 197 (342)
Q Consensus 146 ~~~v~~~s~--~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~--------------------------~~~~~~~~~v~~~ 197 (342)
...+.++.+ +++.+++++.|+.|++||+++.+....... ......+.+++++
T Consensus 161 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 240 (366)
T 3k26_A 161 RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL 240 (366)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE
T ss_pred cCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc
Confidence 445555554 567899999999999999986532111000 0033456778777
Q ss_pred eCCceEEEEccCCeEEEEEeechhhhhcc------------cceeeeEEecCCCCceeeeeeEEEEcCC--CCeEEEecC
Q 019384 198 PNGTGYALSSVEGRVAMEFFDLSEASQAK------------KYAFKCHRKSEAGRDIVYPVNAIAFHPI--YGTFATGGC 263 (342)
Q Consensus 198 ~~~~~~~~~s~~~~~~i~~~d~~~~~~~~------------~~~~~~h~~~~~~~~~~~~v~~v~~sp~--~~~l~sgs~ 263 (342)
+..+++++.++.+. +||........ ...+.. +..+|.+++|+|+ +++|++|+.
T Consensus 241 --~~~l~~~~~d~~i~--~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 241 --GDLILSKSCENAIV--CWKPGKMEDDIDKIKPSESNVTILGRFDY---------SQCDIWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp --TTEEEEECSSSEEE--EEEESSTTCCGGGCCTTCCCEEEEEEEEC---------SSCCSSCCCCEECTTSSEEEEECT
T ss_pred --CCEEEEEecCCEEE--EEeCCCccccccccccCCcchheeccccc---------cCCcEEEEEEcCCCCCcEEEEEec
Confidence 67899999999764 58875432211 011111 1235889999999 999999999
Q ss_pred CCeEEEEeCCCceee----eccCCC--CcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEc
Q 019384 264 DGFVNVWDGNNKKRL----YQYSKY--PTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSV 325 (342)
Q Consensus 264 Dg~I~iWd~~~~~~~----~~~~~~--~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~ 325 (342)
||.|++||+++++.. ..+.+| ...|.+++|+|||++|++++.++ .|.+|++
T Consensus 308 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----------~i~iwd~ 364 (366)
T 3k26_A 308 VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA-----------SIWRWDR 364 (366)
T ss_dssp TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-----------EEEEEEC
T ss_pred CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC-----------EEEEEEe
Confidence 999999999986533 366777 78999999999999999998776 5888876
No 34
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=273.05 Aligned_cols=285 Identities=13% Similarity=0.168 Sum_probs=204.5
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce------------eeeeeecC------------CceEEEEEeCCC
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV------------LRGEFMHG------------GPVLDCCFHDDS 72 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~------------~~~~~~h~------------~~V~~~~~~~~~ 72 (342)
.+.+.|++++|+|++++||+|+.||+|+|||+.++. .....+|. +.|.+++|++++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 457899999999999999999999999999997654 33445787 889999999764
Q ss_pred ---CeEEEecCCcEEEEEeccCce-----------------------------------------eecccCCcceeEEEE
Q 019384 73 ---SGFSASADHTVRRLVFSHGKE-----------------------------------------DILGKHDAPVRCIEY 108 (342)
Q Consensus 73 ---~~~s~s~D~~i~~w~~~~~~~-----------------------------------------~~~~~h~~~V~~~~~ 108 (342)
.+++++.|++|++|++..+.. ....+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 568999999999999876432 113679999999999
Q ss_pred eCCCCEEEEeeCCCcEEEEcCCCCCCcceeee-----eecCCCCcEEEEec--cC-CeEEEEEcCCeEEEEeCCCCCCc-
Q 019384 109 SYAAGQVITGSWDKSLKCWDPRGASGQERTLV-----GTYPQPERVYSLSL--VG-NRLVVATAGRHVNVYDLRNMSQP- 179 (342)
Q Consensus 109 ~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~-----~~~~~~~~v~~~s~--~~-~~~~~~s~d~~v~iwd~~~~~~~- 179 (342)
+|+++.|++| .|++|++||++..... ...+ ....+...+.++.+ ++ +.+++++.|+.|++||+++....
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRS-FNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEE-EEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCce-eeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 9999999998 7999999998732211 1111 01123344555555 44 68999999999999999986531
Q ss_pred --ccccccccc-----------eeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCC------C
Q 019384 180 --EQRRESSLK-----------YQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAG------R 240 (342)
Q Consensus 180 --~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~------~ 240 (342)
......+.. ..+.+++++|+++.+++++. +.+ ++||.+... .....+..|...... .
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v--~iwd~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 339 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSV--KVWDLNMEN-RPVETYQVHEYLRSKLCSLYEN 339 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEE--EEEETTCCS-SCSCCEESCGGGTTTHHHHHHT
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeE--EEEeCCCCc-cccceeeccccccccccccccc
Confidence 111111111 16789999999999998887 765 569986421 122334444321100 0
Q ss_pred ceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec--------------------------------cCCCCcce
Q 019384 241 DIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ--------------------------------YSKYPTSI 288 (342)
Q Consensus 241 ~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~--------------------------------~~~~~~~V 288 (342)
.....+..++|+|++++|++|+.||.|++||+++++.+.. ...+...|
T Consensus 340 ~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 419 (447)
T 3dw8_B 340 DCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKI 419 (447)
T ss_dssp SGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCC
T ss_pred cccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCce
Confidence 0011133499999999999999999999999988765420 11345678
Q ss_pred EEEEECCCCCEEEEEEecc
Q 019384 289 AALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 289 ~~v~~spdg~~las~s~~~ 307 (342)
.+++|+|+|.+||+++.+.
T Consensus 420 ~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 420 LHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CEEEECSSSSEEEEECSSC
T ss_pred eEEEECCCCCEEEEEecce
Confidence 9999999999999998755
No 35
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-34 Score=253.74 Aligned_cols=279 Identities=17% Similarity=0.251 Sum_probs=215.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~- 92 (342)
..|.+.|++++| +++++|++++.||+|+|||+.++... ....|.+.|.+++|++++. +++++.|+.+++|++....
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 789999999999 99999999999999999999877644 4457899999999997765 5689999999999987653
Q ss_pred ---eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEe--c-cCCeEEEEEcCC
Q 019384 93 ---EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLS--L-VGNRLVVATAGR 166 (342)
Q Consensus 93 ---~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s--~-~~~~~~~~s~d~ 166 (342)
...+.+|...|.+++| +++.|++++.|++|++||.. . ....+.. +...+.++. . +++.+++++.|+
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~--~--~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG--S--LVYNLQA--HNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT--E--EEEEEEC--CSSCEEEEEEEETTTTEEEEEETTS
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC--c--EEEeccc--CCCceeEEEEccCCCCEEEEEECCC
Confidence 3456789999999999 46799999999999999932 1 1122222 333344433 3 678999999999
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV 246 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v 246 (342)
.|++||.... ...........+.+++++|++. +++++.++.+ ++||.+.... ...+..|. .+|
T Consensus 166 ~i~i~d~~~~---~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i--~i~d~~~~~~--~~~~~~~~---------~~i 228 (313)
T 3odt_A 166 TIKLWQNDKV---IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLI--KLVDMHTGDV--LRTYEGHE---------SFV 228 (313)
T ss_dssp CEEEEETTEE---EEEECSSCSSCEEEEEEEETTE-EEEEETTSEE--EEEETTTCCE--EEEEECCS---------SCE
T ss_pred CEEEEecCce---EEEEeccCcccEEEEEEcCCCe-EEEccCCCeE--EEEECCchhh--hhhhhcCC---------ceE
Confidence 9999995432 2222222445688999999988 8889999876 5699864322 22333333 369
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 247 NAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 247 ~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
.+++|+|++ .|++|+.||.|++||+++++.+..+..|...|.+++|+|||+++ +++.++ .|.+|+++
T Consensus 229 ~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~dg-----------~i~iw~~~ 295 (313)
T 3odt_A 229 YCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSDN-----------LVRIFSQE 295 (313)
T ss_dssp EEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETTS-----------CEEEEESC
T ss_pred EEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCCC-----------cEEEEeCC
Confidence 999999998 69999999999999999999998999999999999999999954 566554 59999887
Q ss_pred CCccccC
Q 019384 327 EIEVKPK 333 (342)
Q Consensus 327 ~~~~~~~ 333 (342)
......+
T Consensus 296 ~~~~~~~ 302 (313)
T 3odt_A 296 KSRWASE 302 (313)
T ss_dssp GGGCCC-
T ss_pred CCceeeh
Confidence 6544443
No 36
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5e-35 Score=263.88 Aligned_cols=241 Identities=17% Similarity=0.218 Sum_probs=190.6
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce-----eeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEecc
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV-----LRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSH 90 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~-----~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~ 90 (342)
..|...|.+++|+|++++|++|+.|++|+|||+.+.. .....+|.+.|.++.|++++.+++++.|++|++||+.+
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~ 173 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCC
Confidence 4578899999999999999999999999999997642 23345799999999999888899999999999999988
Q ss_pred Cce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEE
Q 019384 91 GKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVN 169 (342)
Q Consensus 91 ~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~ 169 (342)
+.. ..+.+|...|.+++|+|++.+|++|+.|++|++||+++... ...+..+......++++++++.+++++.|++|+
T Consensus 174 ~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~ 251 (340)
T 1got_B 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC--RQTFTGHESDINAICFFPNGNAFATGSDDATCR 251 (340)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee--EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEE
Confidence 774 46788999999999999999999999999999999976432 222333333333344555677999999999999
Q ss_pred EEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEE
Q 019384 170 VYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAI 249 (342)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v 249 (342)
+||+++...............+.+++++|+++.+++++.|+.+. +||..... ....+.+|.. +|.++
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~--vwd~~~~~--~~~~~~~h~~---------~v~~~ 318 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN--VWDALKAD--RAGVLAGHDN---------RVSCL 318 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE--EEETTTCC--EEEEEECCSS---------CEEEE
T ss_pred EEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEE--EEEcccCc--EeeEeecCCC---------cEEEE
Confidence 99998753322111112223578999999999999999999764 59975432 2233444543 69999
Q ss_pred EEcCCCCeEEEecCCCeEEEEe
Q 019384 250 AFHPIYGTFATGGCDGFVNVWD 271 (342)
Q Consensus 250 ~~sp~~~~l~sgs~Dg~I~iWd 271 (342)
+|+|++.+|++|+.|++|+|||
T Consensus 319 ~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999997
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-34 Score=262.19 Aligned_cols=289 Identities=15% Similarity=0.100 Sum_probs=218.9
Q ss_pred CCCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce---eeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEec
Q 019384 14 LGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV---LRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFS 89 (342)
Q Consensus 14 ~~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~---~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~ 89 (342)
+...|.+.|++++|+|++++|++++.|++|+|||+.+++ ......|.+.|.+++|++++. +++++.|+.+++|++.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 445688999999999999999999999999999998874 344457999999999997665 5689999999999998
Q ss_pred cCce---eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEEEEc
Q 019384 90 HGKE---DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATA 164 (342)
Q Consensus 90 ~~~~---~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~ 164 (342)
+++. ..+..|...|.+++|+|++++|++++.|+.|++||++..............+...+.++.+ +++.+++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8762 3457799999999999999999999999999999987643211111111223444555555 5668999999
Q ss_pred CCeEEEEeCCCCC----------------CcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccc
Q 019384 165 GRHVNVYDLRNMS----------------QPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKY 228 (342)
Q Consensus 165 d~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 228 (342)
|+.|++||++... .............+.+++++|++..+++++.++.+ ++||....... .
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~i~d~~~~~~~--~ 238 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV--CLADADKKMAV--A 238 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE--EEEEGGGTTEE--E
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE--EEEECCCCcee--E
Confidence 9999999975211 01111111233457899999999999999999976 45998654322 2
Q ss_pred eeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC--ce--ee--------------------------
Q 019384 229 AFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN--KK--RL-------------------------- 278 (342)
Q Consensus 229 ~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~--~~--~~-------------------------- 278 (342)
.+..|. .+|.+++|+|++.+|++| .|+.|++|+..+ ++ .+
T Consensus 239 ~~~~~~---------~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1k8k_C 239 TLASET---------LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 308 (372)
T ss_dssp EEECSS---------CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred EEccCC---------CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccc
Confidence 233332 268999999999988888 899999999877 32 00
Q ss_pred ----------ecc-CCCCcceEEEEEC-CCC---CEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 279 ----------YQY-SKYPTSIAALSFS-RDG---RLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 279 ----------~~~-~~~~~~V~~v~~s-pdg---~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
..+ .+|...|++++|+ +|| ++|++++.++ .|.+|++..
T Consensus 309 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg-----------~i~~W~~~~ 361 (372)
T 1k8k_C 309 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDG-----------GMSIWDVRS 361 (372)
T ss_dssp C---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTS-----------EEEEEEHHH
T ss_pred cccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCC-----------ceEEEEecC
Confidence 223 4899999999965 777 9999999777 699998864
No 38
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-36 Score=285.12 Aligned_cols=238 Identities=12% Similarity=0.132 Sum_probs=170.3
Q ss_pred CCCCeEEEEEcCCC---------CeEEE-------------------EeCCCcEEEEECCCcee-----eeeeecCCceE
Q 019384 18 PSDGISNLRFSNHS---------DHLLV-------------------SSWDKSVRLYDASANVL-----RGEFMHGGPVL 64 (342)
Q Consensus 18 ~~~~V~~l~fs~~~---------~~l~s-------------------~s~Dgti~vwd~~~~~~-----~~~~~h~~~V~ 64 (342)
+...|++|+|+|++ ++||+ ++.|++|+|||+.++++ .....|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 35678888888875 45554 66889999999976543 12335678999
Q ss_pred EEEEeCC-------CCeEEEecCCcEEEEEeccCce------------eecccCCcceeEEEEeCCCCEEEEeeCCCcEE
Q 019384 65 DCCFHDD-------SSGFSASADHTVRRLVFSHGKE------------DILGKHDAPVRCIEYSYAAGQVITGSWDKSLK 125 (342)
Q Consensus 65 ~~~~~~~-------~~~~s~s~D~~i~~w~~~~~~~------------~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~ 125 (342)
+++|+|+ +.+++++.|++|++|++..+.. ..+.+|...|.+++|+++ +.|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999875 3567899999999999976531 246789999999999985 5899999999999
Q ss_pred EEcCCCCCCcceeeeeecCCCCcEEEE--ec--cC-CeEEEEEcCCeEEEEeCCCCCCcccccccccc-eeeEEEEEeeC
Q 019384 126 CWDPRGASGQERTLVGTYPQPERVYSL--SL--VG-NRLVVATAGRHVNVYDLRNMSQPEQRRESSLK-YQTRCVRCYPN 199 (342)
Q Consensus 126 iWd~~~~~~~~~~~~~~~~~~~~v~~~--s~--~~-~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 199 (342)
+||++++... ...+.. +...|.++ .+ ++ ..+++++.|++|++||+++.+...... .+.. ..+.+++++|+
T Consensus 291 lWD~~~~~~~-~~~~~~--H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 291 EFDLTDPEVP-SFYDQV--HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp EEETTBCSSC-SEEEEC--SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCCSCCCEEEETT
T ss_pred EEECCCCCCc-eEEeec--ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cccccCcccceEeCCC
Confidence 9999754221 122333 33456555 33 34 578999999999999998753221111 1111 13567899999
Q ss_pred CceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 200 GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 200 ~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
++.+++++.++.+ ++||.+.... ...+.+|.. +|++|+|+|++++|++|+.||+|++||..
T Consensus 367 ~~~l~s~~~d~tv--~lwd~~~~~~--~~~l~gH~~---------~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 367 IYSYIYSDGASSL--RAVPSRAAFA--VHPLVSRET---------TITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp TTEEEEECSSSEE--EEEETTCTTC--CEEEEECSS---------CEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred cCeEEEeCCCCcE--EEEECccccc--ceeeecCCC---------ceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 9999999988875 5699865322 233445543 69999999999999999999999999853
No 39
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-35 Score=262.58 Aligned_cols=259 Identities=14% Similarity=0.178 Sum_probs=188.1
Q ss_pred CCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce---eeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEecc
Q 019384 15 GNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV---LRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSH 90 (342)
Q Consensus 15 ~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~---~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~ 90 (342)
..+|...|++++|+|++++||+|+.|++|+|||...+. .....+|.+.|.+++|+|++. +++++.|++|++|++..
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 36799999999999999999999999999999987653 334557999999999997765 56999999999999987
Q ss_pred Cc----eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEE--eccCCeEEEEEc
Q 019384 91 GK----EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSL--SLVGNRLVVATA 164 (342)
Q Consensus 91 ~~----~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~~~~~s~ 164 (342)
.. ...+.+|...|.+++|+|++++|++|+.|++|++||.+.........+.. +...+.++ +++++.+++++.
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~--h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG--HESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecC--CCCceEEEEECCCCCEEEEEeC
Confidence 64 23567899999999999999999999999999999986532111112222 33445544 455678999999
Q ss_pred CCeEEEEeCCCCCCccc--------------ccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhh--cccc
Q 019384 165 GRHVNVYDLRNMSQPEQ--------------RRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQ--AKKY 228 (342)
Q Consensus 165 d~~v~iwd~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~--~~~~ 228 (342)
|++|++||......... .........+.+++++|++..+++++.|+.+++ |+...... ...+
T Consensus 215 D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~v--w~~~~~~~~~~~~~ 292 (345)
T 3fm0_A 215 DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRV--FQEDPNSDPQQPTF 292 (345)
T ss_dssp TSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEE--EEECTTSCTTSCCE
T ss_pred CCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEE--EEeCCCCCcceeeE
Confidence 99999999743321100 000112335778999999999999999998765 66543221 1222
Q ss_pred eeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCCceeeecc
Q 019384 229 AFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNNKKRLYQY 281 (342)
Q Consensus 229 ~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~~~~~~ 281 (342)
.+..|... .|...|++|+|+|++. +||+|+.||+|++|+..+++....+
T Consensus 293 ~~~~~~~~----~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 293 SLTAHLHQ----AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEEEETT----SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEeeecc----cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 23333211 2334699999999984 8999999999999999887665443
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-34 Score=263.76 Aligned_cols=282 Identities=15% Similarity=0.131 Sum_probs=213.9
Q ss_pred CCCCCeEEEEEcCCCC-eEEEEeCCCcEEEEEC----CCce------eeeeee-----------cCCceEEEEEeCCCC-
Q 019384 17 PPSDGISNLRFSNHSD-HLLVSSWDKSVRLYDA----SANV------LRGEFM-----------HGGPVLDCCFHDDSS- 73 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~-~l~s~s~Dgti~vwd~----~~~~------~~~~~~-----------h~~~V~~~~~~~~~~- 73 (342)
.|.+.|++++|+|+++ +||+|+.||+|+|||+ .++. ....+. |.+.|.+++|++++.
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 3458999999999999 9999999999999999 7765 222222 577999999997765
Q ss_pred eEEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCccee---------------
Q 019384 74 GFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERT--------------- 138 (342)
Q Consensus 74 ~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~--------------- 138 (342)
+++++.|+.|++|+........+.+|...|.+++|+|+++.|++++.|+.|++||+++.......
T Consensus 123 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 123 IVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 56899999999999544445667889999999999999999999999999999998653211000
Q ss_pred ------------------------------------eeeec-CCCCcEEE--EeccCCeEEEEEcCCeEEEEeCCCCCCc
Q 019384 139 ------------------------------------LVGTY-PQPERVYS--LSLVGNRLVVATAGRHVNVYDLRNMSQP 179 (342)
Q Consensus 139 ------------------------------------~~~~~-~~~~~v~~--~s~~~~~~~~~s~d~~v~iwd~~~~~~~ 179 (342)
..... .+...+.+ ++.+++.+++++.|+.|++||+++....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ 282 (425)
T ss_dssp ---CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCS
T ss_pred cCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 00000 12233444 4445678999999999999999876433
Q ss_pred ccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEE
Q 019384 180 EQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFA 259 (342)
Q Consensus 180 ~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~ 259 (342)
... ......+.++.++|++ .+++++.++.+ ++||....... ..+..|. .+|.+++|+|++++|+
T Consensus 283 ~~~--~~~~~~i~~~~~~~~~-~l~~~~~d~~i--~i~d~~~~~~~--~~~~~~~---------~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 283 NCF--YGHSQSIVSASWVGDD-KVISCSMDGSV--RLWSLKQNTLL--ALSIVDG---------VPIFAGRISQDGQKYA 346 (425)
T ss_dssp EEE--CCCSSCEEEEEEETTT-EEEEEETTSEE--EEEETTTTEEE--EEEECTT---------CCEEEEEECTTSSEEE
T ss_pred eEe--cCCCccEEEEEECCCC-EEEEEeCCCcE--EEEECCCCcEe--EecccCC---------ccEEEEEEcCCCCEEE
Confidence 222 2234567899999999 88899999876 56998643221 2222222 2689999999999999
Q ss_pred EecCCCeEEEEeCCCce--------------------eeeccCCCCc--ceEEEEECCCCCEEEEEEeccccCCCCCCCC
Q 019384 260 TGGCDGFVNVWDGNNKK--------------------RLYQYSKYPT--SIAALSFSRDGRLLAVASSYTFEEGDKPHEP 317 (342)
Q Consensus 260 sgs~Dg~I~iWd~~~~~--------------------~~~~~~~~~~--~V~~v~~spdg~~las~s~~~~~~~~~~~~~ 317 (342)
+|+.||.|++||+.+++ .+..+.+|.. .|.+++|+||+++|++++.++
T Consensus 347 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---------- 416 (425)
T 1r5m_A 347 VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ---------- 416 (425)
T ss_dssp EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS----------
T ss_pred EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc----------
Confidence 99999999999998877 7888899976 999999999999999998766
Q ss_pred CcEEEEEc
Q 019384 318 DAIFVRSV 325 (342)
Q Consensus 318 ~~~~~~~~ 325 (342)
.|.+|++
T Consensus 417 -~i~iw~~ 423 (425)
T 1r5m_A 417 -EGSVVAI 423 (425)
T ss_dssp -CCEEEEC
T ss_pred -eEEEEee
Confidence 4888876
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=271.17 Aligned_cols=285 Identities=13% Similarity=0.115 Sum_probs=215.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC----c-eeeeeeecCCceEEEEEeCC-C-CeEEEecCCcEEEEEe
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA----N-VLRGEFMHGGPVLDCCFHDD-S-SGFSASADHTVRRLVF 88 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~----~-~~~~~~~h~~~V~~~~~~~~-~-~~~s~s~D~~i~~w~~ 88 (342)
..|...|++++|+|++++|++++.||+|+|||+.. . .......|.+.|.+++|+++ + .+++++.|+.|++|++
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 35788999999999999999999999999999976 2 34455679999999999865 4 5679999999999999
Q ss_pred ccCc------ee----ecccCCcceeEEEEeCC-CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC----CCCcEEEEe
Q 019384 89 SHGK------ED----ILGKHDAPVRCIEYSYA-AGQVITGSWDKSLKCWDPRGASGQERTLVGTYP----QPERVYSLS 153 (342)
Q Consensus 89 ~~~~------~~----~~~~h~~~V~~~~~~~~-~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~----~~~~v~~~s 153 (342)
.+.. .. .+..|...|.+++|+|+ +.+|++++.|+.|++||+++... ...+.... +...+.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEE
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEE
Confidence 8765 21 23579999999999998 68999999999999999976432 11222110 034455555
Q ss_pred cc--C-CeEEEEEcCC---eEEEEeCCCCCCcccccccccceeeEEEEEee-CCceEEEEccCCeEEEEEeechhhhhcc
Q 019384 154 LV--G-NRLVVATAGR---HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYP-NGTGYALSSVEGRVAMEFFDLSEASQAK 226 (342)
Q Consensus 154 ~~--~-~~~~~~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~s~~~~~~i~~~d~~~~~~~~ 226 (342)
++ + ..+++++.|+ .|++||+++...+...........+.+++++| ++..+++++.|+.+ ++||......
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v--~~wd~~~~~~-- 297 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTV--LLWNPESAEQ-- 297 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEE--EEECSSSCCE--
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCE--EEeeCCCCcc--
Confidence 54 3 4788899998 99999999864333322213445688999999 88999999999976 4699864322
Q ss_pred cceeeeEEecCCCCceeeeeeEEEEcCCC-CeEEEecCCCeEEEEeCCCceeeeccC-----------------------
Q 019384 227 KYAFKCHRKSEAGRDIVYPVNAIAFHPIY-GTFATGGCDGFVNVWDGNNKKRLYQYS----------------------- 282 (342)
Q Consensus 227 ~~~~~~h~~~~~~~~~~~~v~~v~~sp~~-~~l~sgs~Dg~I~iWd~~~~~~~~~~~----------------------- 282 (342)
...+..|. .+|.+++|+|++ .+|++++.||+|++||+.+........
T Consensus 298 ~~~~~~~~---------~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (416)
T 2pm9_A 298 LSQFPARG---------NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESK 368 (416)
T ss_dssp EEEEECSS---------SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CC
T ss_pred ceeecCCC---------CceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccc
Confidence 22333333 268999999998 799999999999999998655332211
Q ss_pred ------------CCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 283 ------------KYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 283 ------------~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
.|...+.+++|||||++||+++.+. .|.+|+++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~-----------~v~~w~~~ 413 (416)
T 2pm9_A 369 EKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGK-----------GVSITNPK 413 (416)
T ss_dssp SCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSS-----------CBCCBCCC
T ss_pred cccccccccCCccccCCccceEEeeCCeEEEEeCCCC-----------eEEEEEec
Confidence 1677888999999999999887544 37777664
No 42
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=269.96 Aligned_cols=284 Identities=11% Similarity=0.060 Sum_probs=205.8
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCC---ce---eeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEE
Q 019384 16 NPPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASA---NV---LRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLV 87 (342)
Q Consensus 16 ~~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~---~~---~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~ 87 (342)
..|.+.|++++|+| ++++||||+.||+|+|||+.+ +. ....+.|.+.|.+++|++++. +++++.|+.|++|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 67889999999999 999999999999999999865 32 234457999999999997655 57999999999999
Q ss_pred ec---cCce-ee----------ccc--CCcceeEEE--EeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcE
Q 019384 88 FS---HGKE-DI----------LGK--HDAPVRCIE--YSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERV 149 (342)
Q Consensus 88 ~~---~~~~-~~----------~~~--h~~~V~~~~--~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v 149 (342)
+. .++. .. +.. +...+.++. +++++..|++|+.|++|++||+++... ...+....+...+
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~h~~~v 217 (437)
T 3gre_A 140 VNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER--LQIIENSPRHGAV 217 (437)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE--EEEEECCGGGCCE
T ss_pred eccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee--eEEEccCCCCCce
Confidence 95 3331 11 112 566677777 557888999999999999999976432 2223321123345
Q ss_pred EEE--eccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEe----eCCceEEEEccCCeEEEEEeechhhh
Q 019384 150 YSL--SLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCY----PNGTGYALSSVEGRVAMEFFDLSEAS 223 (342)
Q Consensus 150 ~~~--s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~s~~~~~~i~~~d~~~~~ 223 (342)
.++ +.+++.+++++.|+.|++||+++.... ..........+.+++++ +++..+++++.|+.+ ++||.....
T Consensus 218 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i--~iwd~~~~~ 294 (437)
T 3gre_A 218 SSICIDEECCVLILGTTRGIIDIWDIRFNVLI-RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL--TIWNFVKGH 294 (437)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTTEEE-EEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE--EEEETTTTE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCCccEE-EEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE--EEEEcCCCc
Confidence 554 446678999999999999999875322 22111233467788555 467788999998866 569986543
Q ss_pred hcccceeeeEEec-----------------CCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC---
Q 019384 224 QAKKYAFKCHRKS-----------------EAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK--- 283 (342)
Q Consensus 224 ~~~~~~~~~h~~~-----------------~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~--- 283 (342)
... .+..|... ..+..+..+|.+++|+ ++++|++|+.||+|++||+.+++.+..+.+
T Consensus 295 ~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 295 CQY--AFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp EEE--EEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred EEE--EEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 221 22222110 0011244579999999 778999999999999999998876665554
Q ss_pred ----------------------------------CCcceEEEEECCC--CCEEEEEEecc
Q 019384 284 ----------------------------------YPTSIAALSFSRD--GRLLAVASSYT 307 (342)
Q Consensus 284 ----------------------------------~~~~V~~v~~spd--g~~las~s~~~ 307 (342)
|...|++++|+++ +.+|++|+.++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG 431 (437)
T 3gre_A 372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSG 431 (437)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTS
T ss_pred cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCc
Confidence 8899999999998 77999998877
No 43
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=248.13 Aligned_cols=277 Identities=15% Similarity=0.158 Sum_probs=205.2
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee---ecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce-eec
Q 019384 22 ISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF---MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE-DIL 96 (342)
Q Consensus 22 V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~---~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~-~~~ 96 (342)
.+.|+||+++ +||+ +.|++|+|||+.++++...+ .|...|.+++|++++. +++|+.|++|++|++.+++. ..+
T Consensus 28 ~~~l~WS~~~-~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5779999885 6665 46999999999988765443 5788899999997765 56999999999999998874 567
Q ss_pred ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCC
Q 019384 97 GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNM 176 (342)
Q Consensus 97 ~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~ 176 (342)
.+|...+.++.+. +..+++++.++.+++|+....... ...+..+........+...++.+++++.|++|++||++++
T Consensus 106 ~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 106 TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH-VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred cCccceEEEeecC--CCEEEEEecCCceEeeecCCCcee-EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 8899888877664 578999999999999997654331 1222333333334445556789999999999999999876
Q ss_pred CCccc--ccccccceeeEEEEEeeCCceE-E--EEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEE
Q 019384 177 SQPEQ--RRESSLKYQTRCVRCYPNGTGY-A--LSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAF 251 (342)
Q Consensus 177 ~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~--~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~ 251 (342)
+.... .........+.++.+.|.+..+ . .++.++. +++||........ ...+ ...+..++|
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--i~lwd~~~~~~~~---~~~~---------~~~v~~~~~ 248 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH--IRIWNVCSGACLS---AVDA---------HSQVCSILW 248 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE--EEEEETTTCCEEE---EEEC---------SSCEEEEEE
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE--EEEEecccccccc---cccc---------eeeeeeeee
Confidence 43211 1112233456778888876543 3 3344554 5679875432111 1111 125888999
Q ss_pred cCCCCeEEEe--cCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 252 HPIYGTFATG--GCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 252 sp~~~~l~sg--s~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
+|++..++++ +.|++|+|||+++++++.++.+|.+.|++++|+|||++||+||.+. .|.+|++.|.
T Consensus 249 ~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~-----------~v~iWd~~~~ 316 (318)
T 4ggc_A 249 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADE-----------TLRLWRCFEL 316 (318)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTT-----------EEEEECCSCC
T ss_pred cccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC-----------eEEEEECCCC
Confidence 9999987654 5899999999999999999999999999999999999999999776 6999988664
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.3e-33 Score=259.07 Aligned_cols=279 Identities=16% Similarity=0.185 Sum_probs=210.3
Q ss_pred CeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee---ecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-eee
Q 019384 21 GISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF---MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK-EDI 95 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~---~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~-~~~ 95 (342)
..+.|+||++ +.||+| .|++|+|||+.++++.... .|.+.|++++|++++. +++|+.|++|++|++.+++ ...
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4567999975 466665 5999999999988755443 5778899999997766 4699999999999999887 456
Q ss_pred cccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCC
Q 019384 96 LGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRN 175 (342)
Q Consensus 96 ~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~ 175 (342)
+.+|...|.+++++ +..|++|+.|+++++||.+..... ...+..+........+...+..+++++.|+.+++||+.+
T Consensus 185 ~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~-~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 185 MTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH-VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee-eEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 78999999999875 578999999999999998754332 122333333333444555677999999999999999987
Q ss_pred CCCccc--ccccccceeeEEEEEeeCCceE-EEE--ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEE
Q 019384 176 MSQPEQ--RRESSLKYQTRCVRCYPNGTGY-ALS--SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIA 250 (342)
Q Consensus 176 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~--s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~ 250 (342)
.+.... .........+.+++++|.+..+ +++ +.|+.+ ++||+....... .+..| ..+.++.
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I--~iwd~~t~~~~~--~~~~~----------~~v~~~~ 327 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI--RIWNVCSGACLS--AVDAH----------SQVCSIL 327 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEE--EEEETTTTEEEE--EEECS----------SCEEEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEE--EEEeCCccccce--eeccc----------cceeeee
Confidence 643211 1122334457888999876544 443 456654 679986543221 12221 1478899
Q ss_pred EcCCCCeEEEec--CCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 251 FHPIYGTFATGG--CDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 251 ~sp~~~~l~sgs--~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
|+|+++.+++++ .|++|+|||..+++++.++.+|.+.|++++|||||++||+|+.+. .|.+|++.+.
T Consensus 328 ~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~-----------tvriWdv~~~ 396 (420)
T 4gga_A 328 WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADE-----------TLRLWRCFEL 396 (420)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTT-----------EEEEECCSCS
T ss_pred ecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC-----------eEEEEECCCC
Confidence 999999887654 899999999999999999999999999999999999999999876 6899988764
Q ss_pred c
Q 019384 329 E 329 (342)
Q Consensus 329 ~ 329 (342)
+
T Consensus 397 ~ 397 (420)
T 4gga_A 397 D 397 (420)
T ss_dssp S
T ss_pred C
Confidence 4
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-33 Score=258.96 Aligned_cols=280 Identities=13% Similarity=0.131 Sum_probs=208.6
Q ss_pred CeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee-eecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-eeecc
Q 019384 21 GISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK-EDILG 97 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~-~~~~~ 97 (342)
.+....|++++++||+|+.||+|+|||+.++..... ..|.+.|.+++|++++. +++++.|+.|++|++.+++ ...+.
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 344457899999999999999999999998877666 48999999999997765 5699999999999998876 45678
Q ss_pred cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeec-CCCCcEEE-----------------------Ee
Q 019384 98 KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTY-PQPERVYS-----------------------LS 153 (342)
Q Consensus 98 ~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~-~~~~~v~~-----------------------~s 153 (342)
+|...|.+++|+|+++.|++++.|++|++||++++.. ...+... .....+.+ ++
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 8999999999999999999999999999999975432 1122111 11112222 23
Q ss_pred ccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCc-eEEEEccCCeEEEEEeechhhhhcccceeee
Q 019384 154 LVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGT-GYALSSVEGRVAMEFFDLSEASQAKKYAFKC 232 (342)
Q Consensus 154 ~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 232 (342)
.+++.+++++.|+.|++||+++....... .......+.+++++|++. .+++++.++.+ ++||++..... ...+..
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i--~vwd~~~~~~~-~~~~~~ 332 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYIYAGYENGML--AQWDLRSPECP-VGEFLI 332 (420)
T ss_dssp CTTEEEEEEETTSCEEEEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEEEEEETTSEE--EEEETTCTTSC-SEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeEEc-ccccCCCceeEEEeCCCCCEEEEEeCCCeE--EEEEcCCCcCc-hhhhhc
Confidence 35568999999999999999886543222 223345688999999998 89999999976 56998654321 222333
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCce---------eeeccCCCCcceEEEEECCCCC---EE
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKK---------RLYQYSKYPTSIAALSFSRDGR---LL 300 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~---------~~~~~~~~~~~V~~v~~spdg~---~l 300 (342)
|.. .+|.++.+ |++++|++++.|++|++||+.+.. ....+..|...|.+++|+||++ .|
T Consensus 333 ~~~--------~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l 403 (420)
T 3vl1_A 333 NEG--------TPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEV 403 (420)
T ss_dssp STT--------SCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEE
T ss_pred cCC--------CCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceE
Confidence 211 25777755 578899999999999999987531 1223457888999999999999 55
Q ss_pred EEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 301 AVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 301 as~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
++++.++ .+.+|+++
T Consensus 404 ~a~g~~g-----------~~~~~~~~ 418 (420)
T 3vl1_A 404 LEVGKNN-----------FCALYNLS 418 (420)
T ss_dssp EEEETTT-----------EEEEEESC
T ss_pred EEEcCCc-----------eEEEEecc
Confidence 5555544 37778774
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-34 Score=258.83 Aligned_cols=248 Identities=18% Similarity=0.176 Sum_probs=179.5
Q ss_pred CCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce---eeeeeecCCceEEEEEeC---CCCeEEEecCCcEEEEEe
Q 019384 15 GNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV---LRGEFMHGGPVLDCCFHD---DSSGFSASADHTVRRLVF 88 (342)
Q Consensus 15 ~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~---~~~~~~h~~~V~~~~~~~---~~~~~s~s~D~~i~~w~~ 88 (342)
..+|.+.|++++|+|+|++||||+.|++|+|||+.++. +....+|.+.|.+++|++ +..+++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 36799999999999999999999999999999997653 334568999999999963 456789999999999999
Q ss_pred ccCc---eeecccCCcceeEEEEeCC--CCEEEEeeCCCcEEEEcCCCCCCcc-eeeeeecCCCCcEEEEecc-------
Q 019384 89 SHGK---EDILGKHDAPVRCIEYSYA--AGQVITGSWDKSLKCWDPRGASGQE-RTLVGTYPQPERVYSLSLV------- 155 (342)
Q Consensus 89 ~~~~---~~~~~~h~~~V~~~~~~~~--~~~l~sgs~D~~I~iWd~~~~~~~~-~~~~~~~~~~~~v~~~s~~------- 155 (342)
.++. ...+.+|...|++++|+|+ +.+|++|+.|++|++||++...... ...+..+......+.++++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 8764 2356789999999999997 6789999999999999987532110 0111112112222233332
Q ss_pred ----------CCeEEEEEcCCeEEEEeCCCCCCc-ccccccccceeeEEEEEeeCC----ceEEEEccCCeEEEEEeech
Q 019384 156 ----------GNRLVVATAGRHVNVYDLRNMSQP-EQRRESSLKYQTRCVRCYPNG----TGYALSSVEGRVAMEFFDLS 220 (342)
Q Consensus 156 ----------~~~~~~~s~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~----~~~~~~s~~~~~~i~~~d~~ 220 (342)
+..+++++.|++|++||++..... .......+...+.+++|+|++ ..+++++.|+.+. +|+..
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~--iw~~~ 246 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF--IWTCD 246 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE--EEECS
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE--EEEcc
Confidence 247899999999999999754211 111112334468899999986 7799999999875 58875
Q ss_pred hhhh--cccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 221 EASQ--AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 221 ~~~~--~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
.... .....+..|. ..|.+++|+|++++|++|+.|++|+||+..
T Consensus 247 ~~~~~~~~~~~~~~~~---------~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFN---------DVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECS---------SCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCC---------CcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 4211 1111223332 269999999999999999999999999965
No 47
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.1e-34 Score=262.95 Aligned_cols=239 Identities=17% Similarity=0.198 Sum_probs=190.4
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
..|.+.|++++|+|++++|+||+.|++|+|||+.++... ...+|.+.|.+++|+|++. +++++.|++|++||+.++..
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 226 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 578999999999999999999999999999999886644 4467999999999997665 67999999999999988773
Q ss_pred -eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc-----------------
Q 019384 94 -DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV----------------- 155 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~----------------- 155 (342)
..+.+|...|.++++++++..|++|+.|++|++||+++... ...+.. +...+.++.+.
T Consensus 227 ~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~--~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC--KAELRE--HRHVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--EEEECC--CSSCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce--eeEecC--CCceEEEEEEcCcccccchhhhcccccc
Confidence 56789999999999999999999999999999999976432 122222 33344444443
Q ss_pred -----CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee
Q 019384 156 -----GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF 230 (342)
Q Consensus 156 -----~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 230 (342)
+..+++++.|++|++||++++...... ..+...+.+++++|++..+++++.|+.++ +||..... ....+
T Consensus 303 ~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~--~~h~~~v~~v~~~~~g~~l~s~s~D~~i~--vwd~~~~~--~~~~~ 376 (410)
T 1vyh_C 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDNWVRGVLFHSGGKFILSCADDKTLR--VWDYKNKR--CMKTL 376 (410)
T ss_dssp -----CCEEEEEETTSEEEEEETTTTEEEEEE--ECCSSCEEEEEECSSSSCEEEEETTTEEE--EECCTTSC--CCEEE
T ss_pred ccCCCCCEEEEEeCCCeEEEEECCCCceEEEE--ECCCCcEEEEEEcCCCCEEEEEeCCCeEE--EEECCCCc--eEEEE
Confidence 347999999999999999876432211 22344678999999999999999999765 59985432 22334
Q ss_pred eeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 231 KCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 231 ~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
.+|.. .|.+++|+|++.+|++|+.||+|+||+.+
T Consensus 377 ~~h~~---------~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 377 NAHEH---------FVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCSS---------CEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred cCCCC---------cEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 45543 69999999999999999999999999863
No 48
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-33 Score=249.70 Aligned_cols=246 Identities=13% Similarity=0.164 Sum_probs=190.8
Q ss_pred eeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCC
Q 019384 54 RGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK-EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRG 131 (342)
Q Consensus 54 ~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~ 131 (342)
....+|.+.|.+++|+|++. +++++.|++|++|++.++. ...+..|...|.+++|+|+++.|++|+.|++|++||+++
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 34567999999999998776 5699999999999998876 356788999999999999999999999999999999976
Q ss_pred CCCcceeeeeecCCCCcEEEE--eccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEee-CCceEEEEcc
Q 019384 132 ASGQERTLVGTYPQPERVYSL--SLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYP-NGTGYALSSV 208 (342)
Q Consensus 132 ~~~~~~~~~~~~~~~~~v~~~--s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~s~ 208 (342)
+.. ...+.. +...+.++ ++++..+++++.|++|++||+++....... .......+.+++++| ++..+++++.
T Consensus 87 ~~~--~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 87 GEK--VVDFEA--HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT-FEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp CCE--EEEEEC--CSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE-ECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CcE--EEEEeC--CCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh-hcccCCcEEEEEECCCCCCEEEEEeC
Confidence 432 222333 33445544 455668999999999999999875332222 123345688999999 5678999999
Q ss_pred CCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC--CCCeEEEecCCCeEEEEeCCCceeeeccCCCCc
Q 019384 209 EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP--IYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPT 286 (342)
Q Consensus 209 ~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp--~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~ 286 (342)
|+.+. +||.+.... ...+..+. ...+..++|+| ++.+|++|+.|++|++||+++++++..+.+|..
T Consensus 162 D~~v~--iwd~~~~~~--~~~~~~~~--------~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~ 229 (304)
T 2ynn_A 162 DRTVK--VWSLGQSTP--NFTLTTGQ--------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (304)
T ss_dssp TSEEE--EEETTCSSC--SEEEECCC--------TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCeEE--EEECCCCCc--cceeccCC--------cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC
Confidence 99765 599854322 12222111 12578888876 678999999999999999999999999999999
Q ss_pred ceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 287 SIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 287 ~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
.|.+++|+|++.+|++|+.+. .|.+|++..
T Consensus 230 ~v~~~~~~p~~~~l~s~s~Dg-----------~i~iWd~~~ 259 (304)
T 2ynn_A 230 NVSFAVFHPTLPIIISGSEDG-----------TLKIWNSST 259 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----------CEEEEETTT
T ss_pred CEEEEEECCCCCEEEEEcCCC-----------eEEEEECCC
Confidence 999999999999999999765 466666543
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=253.82 Aligned_cols=295 Identities=13% Similarity=0.093 Sum_probs=218.4
Q ss_pred CccCCCCCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCceeeeee--------------ecCCceEEEEEeC-CC-C
Q 019384 11 GRELGNPPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASANVLRGEF--------------MHGGPVLDCCFHD-DS-S 73 (342)
Q Consensus 11 ~~~~~~~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~~~~~~--------------~h~~~V~~~~~~~-~~-~ 73 (342)
.......|.+.|++++|+| ++++||+|+.||+|+|||+.++...... +|.+.|.+++|++ ++ .
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3445567999999999999 9999999999999999999876433222 3999999999987 54 4
Q ss_pred eEEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCC---CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEE
Q 019384 74 GFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAA---GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVY 150 (342)
Q Consensus 74 ~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~---~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~ 150 (342)
+++++.|+.+++|++.++.......+...+.++++++.+ ..+++++.|+.|++||+++.... ..+.. +...+.
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~--~~~~v~ 190 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--HILQG--HRQEIL 190 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC--EEECC--CCSCEE
T ss_pred EEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee--eeecC--CCCcEE
Confidence 678999999999999988765555578889999999844 48999999999999999764331 22322 334455
Q ss_pred EEec--cCC-eEEEEEcCCeEEEEeCCCCCCccccc--------------ccccceeeEEEEEeeCCceEEEEccCCeEE
Q 019384 151 SLSL--VGN-RLVVATAGRHVNVYDLRNMSQPEQRR--------------ESSLKYQTRCVRCYPNGTGYALSSVEGRVA 213 (342)
Q Consensus 151 ~~s~--~~~-~~~~~s~d~~v~iwd~~~~~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~ 213 (342)
++.+ +++ .+++++.|+.|++||+++........ .......+.+++++|+++.+++++.++.+
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i- 269 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM- 269 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE-
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE-
Confidence 5555 445 48899999999999998764221111 02234567899999999999999999986
Q ss_pred EEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEE
Q 019384 214 MEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSF 293 (342)
Q Consensus 214 i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~ 293 (342)
++||.......... ..+.... ....+........+..++.++.|+.|++||..+++.+..+.+|...|.+++|
T Consensus 270 -~vwd~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 270 -RLWNSSNGENTLVN--YGKVCNN----SKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp -EEEETTTCCBCCCC--CCCCCCC----CSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred -EEEECCCCccceec--ccccccc----ccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 45998654332221 1111000 0011222233344567778888999999999999999999999999999999
Q ss_pred CCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 294 SRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 294 spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
+||+++|++++.++ .|.+|+++..
T Consensus 343 s~~~~~l~s~~~dg-----------~i~iw~~~~~ 366 (408)
T 4a11_B 343 QSNFQELYSGSRDC-----------NILAWVPSLY 366 (408)
T ss_dssp ETTTTEEEEEETTS-----------CEEEEEECC-
T ss_pred cCCCCEEEEECCCC-----------eEEEEeCCCC
Confidence 99999999998766 4777777643
No 50
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.8e-33 Score=279.53 Aligned_cols=273 Identities=17% Similarity=0.214 Sum_probs=217.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
..|.+.|.+++|+|++++||+++.||+|+|||+.++.... ...|.++|.+++|++++. +++++.|+.|++|++.+++.
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 4688999999999999999999999999999998876544 456999999999997765 56899999999999988774
Q ss_pred -eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec---cCCeEEEEEcCCeEE
Q 019384 94 -DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL---VGNRLVVATAGRHVN 169 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~---~~~~~~~~s~d~~v~ 169 (342)
..+.+|...|++++|+|+++.|++++.|++|++||+++... ....+.. +...+.++.+ +++.+++++.|++|+
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA-LEQTFEG--HEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE-EEEEEEC--CSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce-EEEEEcC--CCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 46788999999999999999999999999999999875322 1122222 3344555555 445899999999999
Q ss_pred EEeCCCCCCcccccccccceeeEEEEEee--CCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 170 VYDLRNMSQPEQRRESSLKYQTRCVRCYP--NGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
+||+.+...... ........+.+++++| ++..+++++.++.+ ++||...... ...+..|. .+|.
T Consensus 167 vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i--~~~d~~~~~~--~~~~~~~~---------~~v~ 232 (814)
T 3mkq_A 167 VWSLGQSTPNFT-LTTGQERGVNYVDYYPLPDKPYMITASDDLTI--KIWDYQTKSC--VATLEGHM---------SNVS 232 (814)
T ss_dssp EEETTCSSCSEE-EECCCTTCCCEEEECCSTTCCEEEEECTTSEE--EEEETTTTEE--EEEEECCS---------SCEE
T ss_pred EEECCCCcceeE-EecCCCCCEEEEEEEECCCCCEEEEEeCCCEE--EEEECCCCcE--EEEEcCCC---------CCEE
Confidence 999987643322 2222224567888998 89999999999976 5599854322 22233332 3699
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCC--EEEEEEe
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGR--LLAVASS 305 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~--~las~s~ 305 (342)
+++|+|++.+|++|+.||+|++||..+++.+..+..|...|++++|+|+|. ++++++.
T Consensus 233 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 292 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD 292 (814)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEET
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeC
Confidence 999999999999999999999999999998989999999999999999998 4666654
No 51
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=250.42 Aligned_cols=240 Identities=18% Similarity=0.158 Sum_probs=192.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|...|.+++|++++.+++|++.|++|+|||+.+++... ...|...+.+++|+|++.. ++++.|+.+++|++.+++.
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 6799999999999999999999999999999998876544 4467888999999987764 6889999999999988774
Q ss_pred -eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEe
Q 019384 94 -DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYD 172 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd 172 (342)
..+..|...|.+++|+|++++|++|+.|++|++||++++.. ...+..+......+.+++++..+++++.|++|++||
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd 234 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 234 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 45678889999999999999999999999999999975422 222333334445556666778999999999999999
Q ss_pred CCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc
Q 019384 173 LRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH 252 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s 252 (342)
+++...... .......+.+++++|++..+++++.|+.+. +||+..... ...+..|. .+|.+++|+
T Consensus 235 ~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~--iwd~~~~~~--~~~~~~h~---------~~v~~v~~s 299 (321)
T 3ow8_A 235 VQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDKSVK--VWDVGTRTC--VHTFFDHQ---------DQVWGVKYN 299 (321)
T ss_dssp TTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEE--EEETTTTEE--EEEECCCS---------SCEEEEEEC
T ss_pred CCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCCcEE--EEeCCCCEE--EEEEcCCC---------CcEEEEEEC
Confidence 987643221 123344578999999999999999999875 599864322 22333443 269999999
Q ss_pred CCCCeEEEecCCCeEEEEeC
Q 019384 253 PIYGTFATGGCDGFVNVWDG 272 (342)
Q Consensus 253 p~~~~l~sgs~Dg~I~iWd~ 272 (342)
|++.+|++++.||+|+|||.
T Consensus 300 ~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 300 GNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TTSSEEEEEETTCCEEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999995
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-33 Score=255.54 Aligned_cols=242 Identities=16% Similarity=0.181 Sum_probs=178.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee-----eeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEec
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL-----RGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~-----~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~ 89 (342)
..|..+|++++|+|++. +++++.||+|+|||+.+++. ....+|.+.|.+++|++++. +++++.|+.|++||+.
T Consensus 91 ~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp EECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 36788999999999974 56789999999999977542 23347999999999997765 5699999999999999
Q ss_pred cCce-eecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc---CCeEEEEEc
Q 019384 90 HGKE-DILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV---GNRLVVATA 164 (342)
Q Consensus 90 ~~~~-~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~---~~~~~~~s~ 164 (342)
+++. ..+.+|...|++++|++++. .+++++.|++|++||++++.... .+....+...+.++.++ +..+++++.
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~--~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT--RIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC--BCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee--eeeeccccccccchhhhhcccceEEEeec
Confidence 8874 46789999999999999874 78999999999999998654321 12222233445555553 346888999
Q ss_pred CCeEEEEeCCCCCCcccccccccceeeEEEEEeeCC-ceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCcee
Q 019384 165 GRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNG-TGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIV 243 (342)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~ 243 (342)
|+.|++||+++.+.... .......+.+++++|++ +.+++++.|+.++ +||...... ....+|.
T Consensus 248 d~~i~~wd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~--iwd~~~~~~---~~~~~H~--------- 311 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQT--SAVHSQNITGLAYSYHSSPFLASISEDCTVA--VLDADFSEV---FRDLSHR--------- 311 (357)
T ss_dssp SSCEEEEESSCGGGCEE--ECCCSSCEEEEEECSSSSCCEEEEETTSCEE--EECTTSCEE---EEECCCS---------
T ss_pred ccceeEEECCCCcEeEE--EeccceeEEEEEEcCCCCCEEEEEeCCCEEE--EEECCCCcE---eEECCCC---------
Confidence 99999999987643221 12334567899999987 4688899999865 599854321 2222343
Q ss_pred eeeeEEEEcC-CCCeEEEecCCCeEEEEeCCCce
Q 019384 244 YPVNAIAFHP-IYGTFATGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 244 ~~v~~v~~sp-~~~~l~sgs~Dg~I~iWd~~~~~ 276 (342)
.+|++|+|+| ++.+|+||+.||+|++|++....
T Consensus 312 ~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 312 DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 3699999999 78899999999999999987543
No 53
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-33 Score=249.94 Aligned_cols=248 Identities=17% Similarity=0.156 Sum_probs=184.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
..|...|++++|+|++++|+||+.|++|||||+.+++.. ...+|.+.|.+++|++++. +++++.|++|++|++.....
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~ 141 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCL 141 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 478999999999999999999999999999999887654 4568999999999997665 57999999999999987666
Q ss_pred eecccCCcceeEEEEeCC------CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCe
Q 019384 94 DILGKHDAPVRCIEYSYA------AGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRH 167 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~------~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~ 167 (342)
..+.+|...|.+++|.|. +..|++++.|++|++||+++... ...+..+......+.++++++.+++++.|++
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 778899999999999984 34899999999999999975322 1122222223333445556678999999999
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
|++||+++.+..... .....+.+++++|++..++++..++ + ++|+........ .+..+... ....+...+.
T Consensus 220 i~iwd~~~~~~~~~~---~~~~~v~~~~~sp~~~~la~~~~~~-i--~v~~~~~~~~~~--~~~~~~~~-~~~~~~~~v~ 290 (319)
T 3frx_A 220 IMLWNLAAKKAMYTL---SAQDEVFSLAFSPNRYWLAAATATG-I--KVFSLDPQYLVD--DLRPEFAG-YSKAAEPHAV 290 (319)
T ss_dssp EEEEETTTTEEEEEE---ECCSCEEEEEECSSSSEEEEEETTE-E--EEEEETTEEEEE--EECCCCTT-CCGGGCCCEE
T ss_pred EEEEECCCCcEEEEe---cCCCcEEEEEEcCCCCEEEEEcCCC-c--EEEEeCcCeeee--ccCccccc-cccCcCccee
Confidence 999999876432211 1224578899999999888776553 3 557764321111 11111000 0011223588
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCC
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
+++|+|+|++|++|+.||+|+|||+.+
T Consensus 291 ~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 291 SLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEECCCCCEEEEeecCceEEEEEEee
Confidence 999999999999999999999999865
No 54
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.6e-33 Score=250.24 Aligned_cols=252 Identities=19% Similarity=0.261 Sum_probs=183.0
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|...|++++|+|++.+|+||+.|++|+|||+.+++.. ...+|.+.|.+++|+|++. +++++.|++|++|++.....
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~ 152 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK 152 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce
Confidence 578999999999999999999999999999999887654 4557999999999997765 57999999999999975433
Q ss_pred eec---ccCCcceeEEEEeCCC----------CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEE
Q 019384 94 DIL---GKHDAPVRCIEYSYAA----------GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLV 160 (342)
Q Consensus 94 ~~~---~~h~~~V~~~~~~~~~----------~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~ 160 (342)
... .+|...|.+++|+|++ .+|++++.|++|++||.+. .....+..+......++++++++.++
T Consensus 153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~~g~~l~ 229 (343)
T 2xzm_R 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISPNGKYIA 229 (343)
T ss_dssp EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECCCCCEEE
Confidence 322 3799999999999986 6899999999999999532 11222333333333344555677999
Q ss_pred EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEe--cCC
Q 019384 161 VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK--SEA 238 (342)
Q Consensus 161 ~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~--~~~ 238 (342)
+++.|++|++||++.......... ....+.+++++|++..++++ .++.+ ++||...........+..+.. ...
T Consensus 230 sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~-~d~~v--~iw~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T 2xzm_R 230 TGGKDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVG-TDQGV--KIFNLMTQSKAPVCTIEAEPITKAEG 304 (343)
T ss_dssp EEETTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEE-ESSCE--EEEESSSCCSCSEEECCCCSGGGBTT
T ss_pred EEcCCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEE-CCCCE--EEEEeCCCCCCceEEeecCcchhhhh
Confidence 999999999999965433322221 22357899999998877655 45554 568875432222111211100 000
Q ss_pred CCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCc
Q 019384 239 GRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNK 275 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~ 275 (342)
...+...|.+++|+|++++|++|+.||+|++|+.+++
T Consensus 305 ~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 305 QKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp BCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 0123346899999999999999999999999998754
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.6e-34 Score=264.54 Aligned_cols=282 Identities=12% Similarity=0.115 Sum_probs=204.9
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCcee-ecc
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKED-ILG 97 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~-~~~ 97 (342)
..+++++|+|++++|++++.|++|++||+.++...........+....|++++. +++++.|+.|++|++.++... .+.
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 345689999999999999999999999998765443332333444455666554 568999999999999877754 457
Q ss_pred cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCC
Q 019384 98 KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMS 177 (342)
Q Consensus 98 ~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~ 177 (342)
+|...|.+++|+|++++|++|+.|++|++||+++.... ..+..+......+.++.+++.+++++.|++|++||+++.+
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC--EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 99999999999999999999999999999999765432 2233333333334455567789999999999999998764
Q ss_pred Cccccccc-ccc---------------------eeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 178 QPEQRRES-SLK---------------------YQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 178 ~~~~~~~~-~~~---------------------~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
........ ... ..+.+++++|+++.+++++.++.+. +||.+....... +..
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~--i~d~~~~~~~~~--~~~--- 287 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVIT--VHNVFSKEQTIQ--LPS--- 287 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEE--EEETTTCCEEEE--ECC---
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEE--EEECCCCceeEE--ccc---
Confidence 32211110 111 1223345678899999999999864 599865422211 111
Q ss_pred cCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCCcee-eeccCC-CCcceEEEEECCCCCEEEEEEeccccCCC
Q 019384 236 SEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNNKKR-LYQYSK-YPTSIAALSFSRDGRLLAVASSYTFEEGD 312 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~~-~~~~~~-~~~~V~~v~~spdg~~las~s~~~~~~~~ 312 (342)
.+..+|.+++|+|++. +|++|+.||.|++||+++++. +..+.. |...|.++.| |++++|++++.+.
T Consensus 288 -----~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~----- 356 (420)
T 3vl1_A 288 -----KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDT----- 356 (420)
T ss_dssp -----TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTE-----
T ss_pred -----ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCc-----
Confidence 1223699999999999 999999999999999998654 566665 6677888855 6888999988665
Q ss_pred CCCCCCcEEEEEccC
Q 019384 313 KPHEPDAIFVRSVNE 327 (342)
Q Consensus 313 ~~~~~~~~~~~~~~~ 327 (342)
.|.+|++..
T Consensus 357 ------~v~iw~~~~ 365 (420)
T 3vl1_A 357 ------SIKLDIISD 365 (420)
T ss_dssp ------EEEEEEECC
T ss_pred ------cEEEEeccC
Confidence 477777654
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-34 Score=262.58 Aligned_cols=247 Identities=15% Similarity=0.090 Sum_probs=177.4
Q ss_pred CCCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc--ee-eeeeecCCceEEEEEeCCC-CeEEEecCCcEEEEEec
Q 019384 14 LGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN--VL-RGEFMHGGPVLDCCFHDDS-SGFSASADHTVRRLVFS 89 (342)
Q Consensus 14 ~~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~--~~-~~~~~h~~~V~~~~~~~~~-~~~s~s~D~~i~~w~~~ 89 (342)
+...+.+.|++++|+|++++||+|+.|++|+|||+.++ .. ....+|.+.|.+++|++++ .+++++.|++|++|++.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34456779999999999999999999999999999876 33 3345799999999999765 56799999999999998
Q ss_pred cCc----eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCc-ceeeeeecCCCCcEEEEec--cCCeEEEE
Q 019384 90 HGK----EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQ-ERTLVGTYPQPERVYSLSL--VGNRLVVA 162 (342)
Q Consensus 90 ~~~----~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~-~~~~~~~~~~~~~v~~~s~--~~~~~~~~ 162 (342)
++. ...+.+|...|.+++|+|+++.|++++.|++|++||+++.... ....+.. .+...+.++.+ +++.++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCCEEEEE
Confidence 876 4456789999999999999999999999999999999764321 1112221 13444555554 56689999
Q ss_pred EcCCeEEEEeCCCCCCcc---------------cccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcc-
Q 019384 163 TAGRHVNVYDLRNMSQPE---------------QRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAK- 226 (342)
Q Consensus 163 s~d~~v~iwd~~~~~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~- 226 (342)
+.|++|++||++...... ..........+.+++++|+++.+++++.|+.+ ++||........
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i--~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSV--TIAYPSAPEQPPR 242 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEE--C-CEECSTTSCEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcE--EEEECCCCCCcce
Confidence 999999999986432100 00000333457899999999999999999976 459986543311
Q ss_pred -cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 227 -KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 227 -~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
...+..|. .+|.+++|+|++++|++|+.|+.+ +|+..
T Consensus 243 ~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 243 ALITVKLSQ---------LPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ECCCEECSS---------SCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred eeEeecCCC---------CceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 23334443 269999999999999999877777 56543
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.5e-33 Score=255.10 Aligned_cols=283 Identities=16% Similarity=0.211 Sum_probs=205.2
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee--ecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-eeecc
Q 019384 22 ISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF--MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK-EDILG 97 (342)
Q Consensus 22 V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~--~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~-~~~~~ 97 (342)
+.+++|++ +.+++++.|++|+|||+.++...... .|.+.|.+++|++++. +++++.|+.+++|++.+++ ...+.
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 44466664 67889999999999999887655443 3789999999997765 5688999999999998876 45677
Q ss_pred cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEe--ccCCeEEEEEcCCeEEEEeCCC
Q 019384 98 KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLS--LVGNRLVVATAGRHVNVYDLRN 175 (342)
Q Consensus 98 ~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s--~~~~~~~~~s~d~~v~iwd~~~ 175 (342)
+|...|.+++|+ ++.|++|+.|+.|++||++..... ...+.. +...+.++. .+++.+++++.|+.|++||+++
T Consensus 174 ~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 174 GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQ-IGTLQG--HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE-EEEEEC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcce-eeEEcC--CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 999999999995 579999999999999999743321 222333 334455544 4567899999999999999987
Q ss_pred CCCcccccccccceeeEEEEEeeCCceE-EEEc--cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc
Q 019384 176 MSQPEQRRESSLKYQTRCVRCYPNGTGY-ALSS--VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH 252 (342)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~s--~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s 252 (342)
....... ......+.+++++|++..+ ++++ .++.+ ++||........ .+. + ...|.+++|+
T Consensus 249 ~~~~~~~--~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i--~i~d~~~~~~~~--~~~-~---------~~~v~~~~~s 312 (401)
T 4aez_A 249 SIPKFTK--TNHNAAVKAVAWCPWQSNLLATGGGTMDKQI--HFWNAATGARVN--TVD-A---------GSQVTSLIWS 312 (401)
T ss_dssp SSEEEEE--CCCSSCCCEEEECTTSTTEEEEECCTTTCEE--EEEETTTCCEEE--EEE-C---------SSCEEEEEEC
T ss_pred CCccEEe--cCCcceEEEEEECCCCCCEEEEecCCCCCEE--EEEECCCCCEEE--EEe-C---------CCcEEEEEEC
Confidence 5432211 2234467899999977554 4443 57765 569986442221 111 1 1258999999
Q ss_pred CCCCeEEE--ecCCCeEEEEeCCCceee--eccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 253 PIYGTFAT--GGCDGFVNVWDGNNKKRL--YQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 253 p~~~~l~s--gs~Dg~I~iWd~~~~~~~--~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
|++..|++ |+.||.|++||..+++.. ..+.+|...|.+++|+|||++|++++.++ .|.+|++...
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg-----------~i~iw~~~~~ 381 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE-----------NLKFWRVYDG 381 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS-----------EEEEEECCC-
T ss_pred CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC-----------cEEEEECCCC
Confidence 99999988 669999999999886544 45678999999999999999999998766 5889999876
Q ss_pred ccccCCCCCC
Q 019384 329 EVKPKPKAYP 338 (342)
Q Consensus 329 ~~~~~~~~~~ 338 (342)
....+....+
T Consensus 382 ~~~~~~~~~~ 391 (401)
T 4aez_A 382 DHVKRPIPIT 391 (401)
T ss_dssp ----------
T ss_pred cccccccccc
Confidence 6665554443
No 58
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-33 Score=279.47 Aligned_cols=117 Identities=13% Similarity=0.044 Sum_probs=100.4
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceee
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDI 95 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~ 95 (342)
.+|.+.|++++|+|++++||+|+.||+|+|||..+........|...|.+++|+++..+++++.|++|++||+.+++...
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEE
Confidence 46889999999999999999999999999999988776666678899999999994447899999999999998876432
Q ss_pred cccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCC
Q 019384 96 LGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGA 132 (342)
Q Consensus 96 ~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~ 132 (342)
...|...|++++|+|++++|++|+.|++|++||+++.
T Consensus 94 ~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~ 130 (902)
T 2oaj_A 94 TVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD 130 (902)
T ss_dssp EEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT
T ss_pred EEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 2236678999999999999999999999999998653
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.1e-32 Score=255.15 Aligned_cols=284 Identities=19% Similarity=0.251 Sum_probs=219.1
Q ss_pred CCCCCC-eEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee-eecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDG-ISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~-V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|.+. +.++.| ++++|++|+.||+|+|||+.+++.... .+|.+.|.+++|++++.+++++.|++|++|++.+++.
T Consensus 118 ~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~ 195 (464)
T 3v7d_B 118 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCC 195 (464)
T ss_dssp ECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEE
T ss_pred cCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcE
Confidence 467776 466666 567999999999999999988775544 4799999999999888888999999999999988774
Q ss_pred -eecccCCcceeEEEEe--CCCCEEEEeeCCCcEEEEcCCCCCCccee-------------------eeeecCCCCcEEE
Q 019384 94 -DILGKHDAPVRCIEYS--YAAGQVITGSWDKSLKCWDPRGASGQERT-------------------LVGTYPQPERVYS 151 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~--~~~~~l~sgs~D~~I~iWd~~~~~~~~~~-------------------~~~~~~~~~~v~~ 151 (342)
..+.+|...|.+++|+ +++..|++|+.|++|++||+++....... ......+...+.+
T Consensus 196 ~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 275 (464)
T 3v7d_B 196 THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 275 (464)
T ss_dssp EEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEE
T ss_pred EEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEE
Confidence 4678899999999999 46788999999999999998764321100 1111234456778
Q ss_pred EeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceee
Q 019384 152 LSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFK 231 (342)
Q Consensus 152 ~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 231 (342)
++.+++.+++++.|+.|++||+++.+..... ......+.+++++|++..+++++.|+.+. +||...... ...+.
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~sg~~dg~i~--vwd~~~~~~--~~~~~ 349 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDHERKRCISASMDTTIR--IWDLENGEL--MYTLQ 349 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEETTTTEEEEEETTSCEE--EEETTTTEE--EEEEC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCEEEEEEcCCCCEEEEEeCCCcEE--EEECCCCcE--EEEEe
Confidence 8888999999999999999999876432211 22345688999999999999999999865 599865432 23334
Q ss_pred eEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCC
Q 019384 232 CHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEG 311 (342)
Q Consensus 232 ~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~ 311 (342)
+|. .+|.+++|+ +.+|++|+.||+|++||..++...... .+...+..++|+|++++|++++ ++
T Consensus 350 ~h~---------~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg---- 412 (464)
T 3v7d_B 350 GHT---------ALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-EN---- 412 (464)
T ss_dssp CCS---------SCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TT----
T ss_pred CCC---------CcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CC----
Confidence 443 268899997 578999999999999999987665544 3566788999999999999987 33
Q ss_pred CCCCCCCcEEEEEccCCccc
Q 019384 312 DKPHEPDAIFVRSVNEIEVK 331 (342)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~ 331 (342)
.|.+|+++.+...
T Consensus 413 -------~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 413 -------QFNIYNLRSGKLV 425 (464)
T ss_dssp -------EEEEEETTTCCEE
T ss_pred -------eEEEEECCCCcEE
Confidence 3777877654433
No 60
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-33 Score=252.81 Aligned_cols=245 Identities=19% Similarity=0.247 Sum_probs=170.6
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc-------e-eeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEE
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN-------V-LRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLV 87 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~-------~-~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~ 87 (342)
.|...|++|+|+|++++||+|+.|++|+|||+... . +....+|.+.|.+++|+|++. +++|+.|++|++|+
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 38999999999999999999999999999998431 2 233457999999999997765 56999999999999
Q ss_pred eccC-c----eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC----Ce
Q 019384 88 FSHG-K----EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG----NR 158 (342)
Q Consensus 88 ~~~~-~----~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~----~~ 158 (342)
+... . ...+.+|...|.+++|+|++.+|+||+.|++|++||.++........+. .+...+.++.+++ ..
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN--GHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCSSSSCE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc--CCCCcEEEEEecCCCCeeE
Confidence 9532 2 2356889999999999999999999999999999997643211112222 2344566655543 36
Q ss_pred EEEEEcCCeEEEEeCCCCCCc-------ccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccc-cee
Q 019384 159 LVVATAGRHVNVYDLRNMSQP-------EQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKK-YAF 230 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~-~~~ 230 (342)
+++++.|++|++||++..... ...........+.++++++++ .+++++.|+.+. +||......... ..+
T Consensus 214 l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~--iw~~~~~~~~~~~~~~ 290 (330)
T 2hes_X 214 LCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLA--VYEEVDGEWKVFAKRA 290 (330)
T ss_dssp EEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEE--EEEEETTEEEEEEEES
T ss_pred EEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEE--EEEcCCCceEEEeccc
Confidence 899999999999998653211 001111134467888898654 788999999875 488643211000 001
Q ss_pred eeEEecCCCCceeeeeeEEEEcC--CCCeEEEecCCCeEEEEeCCC
Q 019384 231 KCHRKSEAGRDIVYPVNAIAFHP--IYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 231 ~~h~~~~~~~~~~~~v~~v~~sp--~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
.+|.. ..|++++|+| ++.+|++|+.||+|+|||++.
T Consensus 291 ~~h~~--------~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 291 LCHGV--------YEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CTTTT--------SCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccccc--------ceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 11211 1589999999 688999999999999999864
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.9e-33 Score=247.97 Aligned_cols=272 Identities=15% Similarity=0.165 Sum_probs=208.3
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC-ceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCcee-
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA-NVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKED- 94 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~-~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~- 94 (342)
.+.+.|.+++|+|||+.++++..++.+.+|+... ........|.+.|.+++|++++.++.++.|+.+++|++.+....
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCS
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCcee
Confidence 3456789999999999999988888777776544 34555668999999999998887765445999999999876521
Q ss_pred ---ec--ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEE--EeccCCeEEEEEcCCe
Q 019384 95 ---IL--GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYS--LSLVGNRLVVATAGRH 167 (342)
Q Consensus 95 ---~~--~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~~~~~s~d~~ 167 (342)
.+ .+|...|.+++|+|+++.|++++.|+.|++||+++........+.. +...+.+ ++.+++.+++++.|+.
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 164 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS--SAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC--SSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc--CCCceEEEEECCCCCEEEEEeCCCc
Confidence 22 2799999999999999999999999999999997654222222222 3334444 4456678999999999
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
|++||+++.+.... .......+.+++++|++..+++++.++.+ ++||.+.......+ .| ..++.
T Consensus 165 v~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i--~~~d~~~~~~~~~~---~~---------~~~v~ 228 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQ--FQGHTDGASCIDISNDGTKLWTGGLDNTV--RSWDLREGRQLQQH---DF---------TSQIF 228 (337)
T ss_dssp EEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSEE--EEEETTTTEEEEEE---EC---------SSCEE
T ss_pred EEEEeCCCCceeee--eecccCceEEEEECCCCCEEEEEecCCcE--EEEECCCCceEeee---cC---------CCceE
Confidence 99999987633221 12234567899999999999999999976 46998654322111 11 12588
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
+++|+|++++|++++.|+.|++||.++++. ..+..|...|.+++|+||+++|++++.++
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 999999999999999999999999998764 45678999999999999999999998654
No 62
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6e-33 Score=251.79 Aligned_cols=239 Identities=18% Similarity=0.268 Sum_probs=186.1
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc-------eeeeeeecCCceEEEEEeCCC-CeEEEecCCcEEEEE
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN-------VLRGEFMHGGPVLDCCFHDDS-SGFSASADHTVRRLV 87 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~-------~~~~~~~h~~~V~~~~~~~~~-~~~s~s~D~~i~~w~ 87 (342)
..|...|.+++|+|++.+|++|+.|+++++|++... .......|.+.|.++.|++++ .+++++.|++|++||
T Consensus 103 ~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd 182 (354)
T 2pbi_B 103 TMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWD 182 (354)
T ss_dssp ECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEe
Confidence 456788999999999999999999999999998532 234445799999999998766 567999999999999
Q ss_pred eccCce-eecccCCcceeEEEEeC--CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEE--EeccCCeEEEE
Q 019384 88 FSHGKE-DILGKHDAPVRCIEYSY--AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYS--LSLVGNRLVVA 162 (342)
Q Consensus 88 ~~~~~~-~~~~~h~~~V~~~~~~~--~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~~~~~ 162 (342)
+.+++. ..+.+|...|.+++|+| ++..|++|+.|++|++||++++.. ...+.. +...+.+ ++++++.++++
T Consensus 183 ~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~--~~~~~~--h~~~v~~v~~~p~~~~l~s~ 258 (354)
T 2pbi_B 183 VESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC--VQAFET--HESDVNSVRYYPSGDAFASG 258 (354)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE--EEEECC--CSSCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE--EEEecC--CCCCeEEEEEeCCCCEEEEE
Confidence 988874 56789999999999987 467999999999999999986432 222322 3344544 44567799999
Q ss_pred EcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCce
Q 019384 163 TAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDI 242 (342)
Q Consensus 163 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~ 242 (342)
+.|++|++||++................+.+++++|++..+++++.|+.+. +||...... ...+.+|.
T Consensus 259 s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~--vwd~~~~~~--~~~l~~h~-------- 326 (354)
T 2pbi_B 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN--VWDVLKGSR--VSILFGHE-------- 326 (354)
T ss_dssp ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEE--EEETTTCSE--EEEECCCS--------
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEE--EEECCCCce--EEEEECCC--------
Confidence 999999999998753221111112223467899999999999999999875 599854322 22334443
Q ss_pred eeeeeEEEEcCCCCeEEEecCCCeEEEEe
Q 019384 243 VYPVNAIAFHPIYGTFATGGCDGFVNVWD 271 (342)
Q Consensus 243 ~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd 271 (342)
.+|.+++|+|++.+|++|+.||+|+||+
T Consensus 327 -~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 327 -NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred -CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 3699999999999999999999999996
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=249.60 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=187.6
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC--cee-eeeeecCCceEEEEEeC---CCCeEEEecCCcEEEEEec
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA--NVL-RGEFMHGGPVLDCCFHD---DSSGFSASADHTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~--~~~-~~~~~h~~~V~~~~~~~---~~~~~s~s~D~~i~~w~~~ 89 (342)
+.|.+.|++++|+|++++||+|+.||+|+|||+.. ... .....|.+.|.+++|++ +..+++++.|+.|++|++.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 67999999999999999999999999999999973 333 34457999999999974 3456799999999999999
Q ss_pred cCc---eeecccCCcceeEEEEeCC--CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc---------
Q 019384 90 HGK---EDILGKHDAPVRCIEYSYA--AGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--------- 155 (342)
Q Consensus 90 ~~~---~~~~~~h~~~V~~~~~~~~--~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--------- 155 (342)
+++ ...+..|...|.+++|+|+ +..|++++.|++|++||++.........+.. +...+.++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC--CTTCEEEEEECCCC------
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC--CCCceEEEEEcCcccccccc
Confidence 875 3456789999999999999 8999999999999999998653322222222 33445555543
Q ss_pred ------CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccce
Q 019384 156 ------GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYA 229 (342)
Q Consensus 156 ------~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 229 (342)
++.+++++.|+.|++||+++..... .. ...
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----------~~---------------------------------~~~ 201 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------VL---------------------------------EST 201 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEE-----------EE---------------------------------EEE
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcce-----------ee---------------------------------EEE
Confidence 4577888888888888876532100 00 001
Q ss_pred eeeEEecCCCCceeeeeeEEEEcCC---CCeEEEecCCCeEEEEeCCCce-----eeeccCCCCcceEEEEECCCCCEEE
Q 019384 230 FKCHRKSEAGRDIVYPVNAIAFHPI---YGTFATGGCDGFVNVWDGNNKK-----RLYQYSKYPTSIAALSFSRDGRLLA 301 (342)
Q Consensus 230 ~~~h~~~~~~~~~~~~v~~v~~sp~---~~~l~sgs~Dg~I~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~la 301 (342)
+..|. .+|.+++|+|+ +.+|++++.||+|++||++++. .+.....|...|++++|+|||++|+
T Consensus 202 ~~~h~---------~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 272 (379)
T 3jrp_A 202 LEGHS---------DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA 272 (379)
T ss_dssp ECCCS---------SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred Eeccc---------CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEE
Confidence 11222 25899999999 8999999999999999998752 3334456889999999999999999
Q ss_pred EEEeccccCCCCCCCCCcEEEEEcc
Q 019384 302 VASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 302 s~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
+++.++ .|.+|++.
T Consensus 273 ~~~~dg-----------~i~iw~~~ 286 (379)
T 3jrp_A 273 LSGGDN-----------KVTLWKEN 286 (379)
T ss_dssp EEESSS-----------SEEEEEEE
T ss_pred EecCCC-----------cEEEEeCC
Confidence 998755 47777765
No 64
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.5e-33 Score=256.62 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=188.5
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce--------eeeeeecCCceEEEEEeCC--CCeEEEecCCcEEE
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV--------LRGEFMHGGPVLDCCFHDD--SSGFSASADHTVRR 85 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~--------~~~~~~h~~~V~~~~~~~~--~~~~s~s~D~~i~~ 85 (342)
..|...|.+++|+|++++||+|+.|++++|||+.... .....+|.+.|.++.|.++ ..+++|+.|++|++
T Consensus 105 ~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~ 184 (380)
T 3iz6_a 105 KLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVL 184 (380)
T ss_dssp ECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEE
T ss_pred ecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEE
Confidence 4678899999999999999999999999999986421 2334579999999999864 35789999999999
Q ss_pred EEeccCcee-ec-----ccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCe
Q 019384 86 LVFSHGKED-IL-----GKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNR 158 (342)
Q Consensus 86 w~~~~~~~~-~~-----~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~ 158 (342)
||+.++... .+ .+|...|.+++|++ ++..|++|+.|++|++||++..... ...+..+......+.++++++.
T Consensus 185 wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~ 263 (380)
T 3iz6_a 185 WDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRA-VRTYHGHEGDINSVKFFPDGQR 263 (380)
T ss_dssp ECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCC-CEEECCCSSCCCEEEECTTSSE
T ss_pred EEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcc-eEEECCcCCCeEEEEEecCCCe
Confidence 999887743 22 57999999999987 7789999999999999999743221 2223334444445566667789
Q ss_pred EEEEEcCCeEEEEeCCCCCCcccccccc-----cceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeE
Q 019384 159 LVVATAGRHVNVYDLRNMSQPEQRRESS-----LKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 233 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h 233 (342)
+++++.|++|++||++++.......... ....+.+++++|++..+++++.++.+. +||........ .+.
T Consensus 264 l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~--vwd~~~~~~~~--~~~-- 337 (380)
T 3iz6_a 264 FGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY--VWDTLLAEMVL--NLG-- 337 (380)
T ss_dssp EEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE--EEETTTCCEEE--EEC--
T ss_pred EEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE--EEECCCCceEE--EEe--
Confidence 9999999999999998764321111100 011257899999999999999999865 59975432211 110
Q ss_pred EecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCce
Q 019384 234 RKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 234 ~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~ 276 (342)
.....|...|++++|+|+|.+|++|+.||+|+||++...+
T Consensus 338 ---~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 338 ---TLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ---CSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ---cccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 0001233479999999999999999999999999987643
No 65
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=275.25 Aligned_cols=277 Identities=14% Similarity=0.138 Sum_probs=201.0
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee------------eeeecCCceEEEEEeCC--CCeEEEecCCcE
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR------------GEFMHGGPVLDCCFHDD--SSGFSASADHTV 83 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~------------~~~~h~~~V~~~~~~~~--~~~~s~s~D~~i 83 (342)
|...|++++|+|++++|++|+.||+|++||+.++.+. ...+|.+.|.+++|+|+ ..+++++.|+.+
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v 176 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL 176 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE
Confidence 5578999999999999999999999999999887643 12458899999999975 356799999999
Q ss_pred EEEEeccCce-eeccc------------------CCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc--------
Q 019384 84 RRLVFSHGKE-DILGK------------------HDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE-------- 136 (342)
Q Consensus 84 ~~w~~~~~~~-~~~~~------------------h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~-------- 136 (342)
+||+.+++. ..+.. |...|++++|+|++.+|+||+.|++|++||++++....
T Consensus 177 -lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~ 255 (902)
T 2oaj_A 177 -TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETE 255 (902)
T ss_dssp -EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSC
T ss_pred -EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccc
Confidence 999988763 23333 46789999999999999999999999999986432100
Q ss_pred ---------------e-----------------eee--eecC--------------------------------------
Q 019384 137 ---------------R-----------------TLV--GTYP-------------------------------------- 144 (342)
Q Consensus 137 ---------------~-----------------~~~--~~~~-------------------------------------- 144 (342)
. ..+ ....
T Consensus 256 ~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 335 (902)
T 2oaj_A 256 INVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMK 335 (902)
T ss_dssp TTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEE
T ss_pred cCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceE
Confidence 0 000 0000
Q ss_pred -----CC-------------------------------CcEEEE------------------------------------
Q 019384 145 -----QP-------------------------------ERVYSL------------------------------------ 152 (342)
Q Consensus 145 -----~~-------------------------------~~v~~~------------------------------------ 152 (342)
.. ..+..+
T Consensus 336 ~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~ 415 (902)
T 2oaj_A 336 IFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNK 415 (902)
T ss_dssp EECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHH
T ss_pred EEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHH
Confidence 00 000000
Q ss_pred ----------------------------eccCCeEEEEEcCCeEEEEeCCCCCCcccc-cc--------cccceeeEEEE
Q 019384 153 ----------------------------SLVGNRLVVATAGRHVNVYDLRNMSQPEQR-RE--------SSLKYQTRCVR 195 (342)
Q Consensus 153 ----------------------------s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~-~~--------~~~~~~~~~v~ 195 (342)
+.+++.+++++.|++|++||+.++...... .. ......+.+++
T Consensus 416 ~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~sva 495 (902)
T 2oaj_A 416 LWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKIS 495 (902)
T ss_dssp HHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEE
T ss_pred HHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEE
Confidence 112336788899999999998776321100 00 02334688999
Q ss_pred EeeCCceEEEEccCCeEEEEEeechhhhh----------c---------------------------------ccceeee
Q 019384 196 CYPNGTGYALSSVEGRVAMEFFDLSEASQ----------A---------------------------------KKYAFKC 232 (342)
Q Consensus 196 ~~~~~~~~~~~s~~~~~~i~~~d~~~~~~----------~---------------------------------~~~~~~~ 232 (342)
|+|+++.+++++.|+++++ ||+..... . ....+.
T Consensus 496 fspdg~~LAsgs~DgtV~l--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~- 572 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVL--FKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH- 572 (902)
T ss_dssp EETTTTEEEEEETTSCEEE--EEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-
T ss_pred ecCCCCeEEEEecCcEEEE--EEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-
Confidence 9999999999999998865 66543210 0 001111
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceee-----eccC-CCCcceEEEEEC-----CCC---C
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRL-----YQYS-KYPTSIAALSFS-----RDG---R 298 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~-----~~~~-~~~~~V~~v~~s-----pdg---~ 298 (342)
.|..+|++|+|+|+| +||+|+.|++|+|||++++..+ ..+. +|.+.|++|+|| ||| +
T Consensus 573 --------~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 573 --------ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp --------CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred --------cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 234479999999999 9999999999999999887654 2454 899999999999 886 8
Q ss_pred EEEEEEecc
Q 019384 299 LLAVASSYT 307 (342)
Q Consensus 299 ~las~s~~~ 307 (342)
+|++|+.+.
T Consensus 644 ~l~sgs~D~ 652 (902)
T 2oaj_A 644 LMVCGTDMG 652 (902)
T ss_dssp EEEEEETTS
T ss_pred EEEEEecCC
Confidence 999998765
No 66
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.5e-32 Score=253.23 Aligned_cols=275 Identities=19% Similarity=0.257 Sum_probs=212.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE- 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~- 93 (342)
..|...|++++| ++++|++|+.||+|+|||+.+++... ..+|.+.|.+++| ++..+++|+.|++|++|++.+++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 567788999987 78999999999999999998876544 4579999999999 555678999999999999988774
Q ss_pred eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeC
Q 019384 94 DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDL 173 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~ 173 (342)
..+.+|...|.+++|+ ++.|++|+.|++|++||+++...... ......+...+.++.++++.+++++.|+.|++||+
T Consensus 207 ~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL-RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp EEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEE-EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred EEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCcee-eeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC
Confidence 4677899999999997 46999999999999999976443211 11122345567788888999999999999999999
Q ss_pred CCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC
Q 019384 174 RNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP 253 (342)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp 253 (342)
++....... ......+.++.+ ++..+++++.|+.+. +||.+.... ...+.+|. .+|.+++|
T Consensus 284 ~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~g~~dg~i~--iwd~~~~~~--~~~~~~h~---------~~v~~~~~-- 344 (435)
T 1p22_A 284 STCEFVRTL--NGHKRGIACLQY--RDRLVVSGSSDNTIR--LWDIECGAC--LRVLEGHE---------ELVRCIRF-- 344 (435)
T ss_dssp TTCCEEEEE--ECCSSCEEEEEE--ETTEEEEEETTSCEE--EEETTTCCE--EEEECCCS---------SCEEEEEC--
T ss_pred CcCcEEEEE--cCCCCcEEEEEe--CCCEEEEEeCCCeEE--EEECCCCCE--EEEEeCCc---------CcEEEEEe--
Confidence 886433221 122334666666 567899999999875 599865322 22333343 26889988
Q ss_pred CCCeEEEecCCCeEEEEeCCCce---------eeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEE
Q 019384 254 IYGTFATGGCDGFVNVWDGNNKK---------RLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRS 324 (342)
Q Consensus 254 ~~~~l~sgs~Dg~I~iWd~~~~~---------~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~ 324 (342)
++.+|++|+.||+|++||+.++. ++..+.+|...|.+++| |+++|++++.++ .|.+|+
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg-----------~i~iwd 411 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDD-----------TILIWD 411 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSS-----------EEEEEC
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCC-----------EEEEEE
Confidence 78899999999999999987654 67788999999999999 889999988766 599998
Q ss_pred ccCC
Q 019384 325 VNEI 328 (342)
Q Consensus 325 ~~~~ 328 (342)
+...
T Consensus 412 ~~~~ 415 (435)
T 1p22_A 412 FLND 415 (435)
T ss_dssp ----
T ss_pred CCCC
Confidence 8654
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-32 Score=283.60 Aligned_cols=285 Identities=19% Similarity=0.267 Sum_probs=221.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|.+.|++++|+|++++||+|+.||+|+|||+.++... ...+|.+.|.+++|++++. +++++.|+.|++||+.+++.
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 478999999999999999999999999999999887644 4457999999999997765 56899999999999998873
Q ss_pred -eecccCCcceeEEEEeCC--CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEE
Q 019384 94 -DILGKHDAPVRCIEYSYA--AGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNV 170 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~--~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~i 170 (342)
..+.+|...|.+++|+|+ +..+++|+.|++|++||++++.. ...+..+......+.++.+++.+++++.|++|++
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~v 769 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC--RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRL 769 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE--EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEE
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch--hheecCCCCCEEEEEEecCCCEEEEEECCCeEEE
Confidence 467899999999999994 45889999999999999976432 2223333333333445556779999999999999
Q ss_pred EeCCCCCCccccc-----------ccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCC
Q 019384 171 YDLRNMSQPEQRR-----------ESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAG 239 (342)
Q Consensus 171 wd~~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~ 239 (342)
||+++........ .......+.+++++|++..+++++ ++. +.+||.......... ...|
T Consensus 770 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~--v~~~d~~~~~~~~~~-~~~~------ 839 (1249)
T 3sfz_A 770 WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNK--VLLFDIHTSGLLAEI-HTGH------ 839 (1249)
T ss_dssp EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTE--EEEEETTTCCEEEEE-ECSS------
T ss_pred EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCc--EEEEEecCCCceeEE-cCCC------
Confidence 9998653211110 001112456788999999888877 454 456988644322111 1122
Q ss_pred CceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCc
Q 019384 240 RDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDA 319 (342)
Q Consensus 240 ~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~ 319 (342)
...|.+++|+|++.++++|+.||+|++||..++..+..+.+|...|.+++|+|||++|++++.+. .
T Consensus 840 ---~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg-----------~ 905 (1249)
T 3sfz_A 840 ---HSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ-----------T 905 (1249)
T ss_dssp ---SSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----------C
T ss_pred ---CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCC-----------e
Confidence 23689999999999999999999999999999999999999999999999999999999998765 4
Q ss_pred EEEEEcc
Q 019384 320 IFVRSVN 326 (342)
Q Consensus 320 ~~~~~~~ 326 (342)
+.+|++.
T Consensus 906 v~vw~~~ 912 (1249)
T 3sfz_A 906 IRVWETK 912 (1249)
T ss_dssp EEEEEHH
T ss_pred EEEEEcc
Confidence 6677654
No 68
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8e-32 Score=240.87 Aligned_cols=263 Identities=13% Similarity=0.121 Sum_probs=188.6
Q ss_pred CCCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc----ee-eeeeecCCceEEEEEeC---CCCeEEEecCCcEEE
Q 019384 14 LGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN----VL-RGEFMHGGPVLDCCFHD---DSSGFSASADHTVRR 85 (342)
Q Consensus 14 ~~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~----~~-~~~~~h~~~V~~~~~~~---~~~~~s~s~D~~i~~ 85 (342)
+..+|.+.|++++|+|++++||+|+.||+|+|||+.++ .+ .....|.+.|.+++|++ +..+++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 34689999999999999999999999999999999764 22 33457999999999986 445679999999999
Q ss_pred EEeccCc----------eeecccCCcceeEEEEeCC--CCEEEEeeCCCcEEEEcCCCCCCcceeee---------eecC
Q 019384 86 LVFSHGK----------EDILGKHDAPVRCIEYSYA--AGQVITGSWDKSLKCWDPRGASGQERTLV---------GTYP 144 (342)
Q Consensus 86 w~~~~~~----------~~~~~~h~~~V~~~~~~~~--~~~l~sgs~D~~I~iWd~~~~~~~~~~~~---------~~~~ 144 (342)
|++..+. ...+..|...|.+++|+|+ +.+|++++.|++|++||+++......... ....
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 9998753 3356789999999999999 99999999999999999876543211110 0001
Q ss_pred CCCcEEE--Eecc---CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCC----ceEEEEccCCeEEEE
Q 019384 145 QPERVYS--LSLV---GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNG----TGYALSSVEGRVAME 215 (342)
Q Consensus 145 ~~~~v~~--~s~~---~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~s~~~~~~i~ 215 (342)
+...+.+ ++++ ++.+++++.++.+.+|+..................+.+++++|++ ..+++++.|+.+.
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~-- 243 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR-- 243 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE--
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE--
Confidence 2223344 4443 668999999999988887665322122222344568899999998 7899999999875
Q ss_pred Eeechhhhhcccc-----------------------------------eeeeEEecCCCCceeeeeeEEEEcCCCCeEEE
Q 019384 216 FFDLSEASQAKKY-----------------------------------AFKCHRKSEAGRDIVYPVNAIAFHPIYGTFAT 260 (342)
Q Consensus 216 ~~d~~~~~~~~~~-----------------------------------~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~s 260 (342)
+||.+........ .............+..+|++++|+|++++|++
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence 5887542110000 00000000000123347999999999999999
Q ss_pred ecCCCeEEEEeCCCceee
Q 019384 261 GGCDGFVNVWDGNNKKRL 278 (342)
Q Consensus 261 gs~Dg~I~iWd~~~~~~~ 278 (342)
|+.||.|+|||+.+++.+
T Consensus 324 ~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 324 AGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EETTSCEEEEEECTTSCE
T ss_pred ecCCCcEEEEecCcCcch
Confidence 999999999999876543
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.1e-31 Score=255.27 Aligned_cols=296 Identities=14% Similarity=0.132 Sum_probs=210.2
Q ss_pred CCCCCCeEEEEEcCCCC-eEEEEeCCCcEEEEECCCceeeee-eecCC---ceEEEEEeCC-CC-eEEEecCCcEEEEEe
Q 019384 16 NPPSDGISNLRFSNHSD-HLLVSSWDKSVRLYDASANVLRGE-FMHGG---PVLDCCFHDD-SS-GFSASADHTVRRLVF 88 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~-~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~---~V~~~~~~~~-~~-~~s~s~D~~i~~w~~ 88 (342)
..|...|++++|+|+++ +|++++.|++|++||+..++.... ..|.+ .|.+++|+++ +. +++++.|+.|++|++
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 56889999999999998 799999999999999988765544 46888 9999999977 65 568999999999999
Q ss_pred ccCcee-ec-c---cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC--CCCcEEEEec-cCCeEE
Q 019384 89 SHGKED-IL-G---KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYP--QPERVYSLSL-VGNRLV 160 (342)
Q Consensus 89 ~~~~~~-~~-~---~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~--~~~~v~~~s~-~~~~~~ 160 (342)
.+++.. .+ . .|...|.+++|+ +++.|++++.|++|++||+++... ...+.... ....+..+.+ +++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC--VQKWTLDKQQLGNQQVGVVATGNGRII 313 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE--EEEEECCTTCGGGCEEEEEEEETTEEE
T ss_pred CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE--EEEEcCCCCcccCceeEEEeCCCCeEE
Confidence 887743 44 4 899999999999 999999999999999999975432 11122110 1122333333 667888
Q ss_pred EEEcCCeEEEEeCCCCCCcccccc-------------------------------cccceeeEEEEEeeCCceEEEEccC
Q 019384 161 VATAGRHVNVYDLRNMSQPEQRRE-------------------------------SSLKYQTRCVRCYPNGTGYALSSVE 209 (342)
Q Consensus 161 ~~s~d~~v~iwd~~~~~~~~~~~~-------------------------------~~~~~~~~~v~~~~~~~~~~~~s~~ 209 (342)
+++.++.|++||+.+......... ......+.++++ +++..+++++.+
T Consensus 314 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d 392 (615)
T 1pgu_A 314 SLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWD 392 (615)
T ss_dssp EEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETT
T ss_pred EEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCC
Confidence 888888899998875321110000 011122344444 335556666666
Q ss_pred CeEEEEEeechhhh---------------------------------------------------------------hcc
Q 019384 210 GRVAMEFFDLSEAS---------------------------------------------------------------QAK 226 (342)
Q Consensus 210 ~~~~i~~~d~~~~~---------------------------------------------------------------~~~ 226 (342)
+.+. +||..... ..+
T Consensus 393 ~~i~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 393 DTLK--VNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TEEE--ETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred CCEE--EEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEE
Confidence 6543 35543210 000
Q ss_pred cceeeeEEec-CCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC-CCcceEEEEECC---------
Q 019384 227 KYAFKCHRKS-EAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK-YPTSIAALSFSR--------- 295 (342)
Q Consensus 227 ~~~~~~h~~~-~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~-~~~~V~~v~~sp--------- 295 (342)
.|.+...... .....+..+|.+++|+|++++|++|+.||.|++||+++++.+..+.+ |...|.+++|+|
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~ 550 (615)
T 1pgu_A 471 VFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEE 550 (615)
T ss_dssp EEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------C
T ss_pred EEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccc
Confidence 0000000000 01122345799999999999999999999999999999999998888 999999999999
Q ss_pred -CCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 296 -DGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 296 -dg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
|+++||+++.+. .|.+|+++..
T Consensus 551 ~~~~~l~~~~~dg-----------~i~iw~~~~~ 573 (615)
T 1pgu_A 551 IEEDLVATGSLDT-----------NIFIYSVKRP 573 (615)
T ss_dssp CSCCEEEEEETTS-----------CEEEEESSCT
T ss_pred cCCCEEEEEcCCC-----------cEEEEECCCC
Confidence 999999998765 5778877643
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-31 Score=247.49 Aligned_cols=279 Identities=19% Similarity=0.284 Sum_probs=214.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE- 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~- 93 (342)
..|...|++++|+ +++|++|+.||+|++||+.+++... ..+|.+.|.++.|. +..+++++.|+.+++|++.+++.
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~ 232 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCL 232 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSCCEE
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCCcEE
Confidence 5788999999998 5699999999999999998876544 45799999999996 44678999999999999988773
Q ss_pred eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeC
Q 019384 94 DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDL 173 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~ 173 (342)
..+.+|...|.+++| +++.|++|+.|++|++||+++... ...+. .+...+.++.+++..+++++.|+.|++||+
T Consensus 233 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 233 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC--LHTLQ--GHTNRVYSLQFDGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp EEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE--EEEEC--CCSSCEEEEEECSSEEEEEETTSCEEEEET
T ss_pred EEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE--eEEec--CCCCceEEEEECCCEEEEEeCCCeEEEEEC
Confidence 467789999999998 678999999999999999875322 11122 244567788888899999999999999999
Q ss_pred CCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC
Q 019384 174 RNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP 253 (342)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp 253 (342)
++++..... ......+.++. +++..+++++.|+.+. +||....... ..+..+ ..+..+|.+++|+
T Consensus 307 ~~~~~~~~~--~~~~~~v~~~~--~~~~~l~~~~~dg~i~--vwd~~~~~~~--~~~~~~------~~~~~~v~~~~~~- 371 (445)
T 2ovr_B 307 ETGNCIHTL--TGHQSLTSGME--LKDNILVSGNADSTVK--IWDIKTGQCL--QTLQGP------NKHQSAVTCLQFN- 371 (445)
T ss_dssp TTCCEEEEE--CCCCSCEEEEE--EETTEEEEEETTSCEE--EEETTTCCEE--EEECST------TSCSSCEEEEEEC-
T ss_pred CCCCEEEEE--cCCcccEEEEE--EeCCEEEEEeCCCeEE--EEECCCCcEE--EEEccC------CCCCCCEEEEEEC-
Confidence 886433221 11222344444 4677899999999865 5998543222 122221 1123368999995
Q ss_pred CCCeEEEecCCCeEEEEeCCCceeeecc-----CCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 254 IYGTFATGGCDGFVNVWDGNNKKRLYQY-----SKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 254 ~~~~l~sgs~Dg~I~iWd~~~~~~~~~~-----~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
+.+|++|+.||+|++||..+++.+..+ .+|.+.|++++|+|+|.+||+|+.++.+... +++++.+
T Consensus 372 -~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~-------l~v~df~ 441 (445)
T 2ovr_B 372 -KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK-------LLVLDFD 441 (445)
T ss_dssp -SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCE-------EEEEECC
T ss_pred -CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccE-------EEEEECC
Confidence 579999999999999999998887766 4678899999999999999999888744443 8888764
No 71
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-31 Score=246.29 Aligned_cols=241 Identities=20% Similarity=0.248 Sum_probs=180.8
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCceeec
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKEDIL 96 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~ 96 (342)
...|++++|+|++++||+|+.|++|+|||+.+++... ..+|.+.|.+++|++++. +++++.|+++++||+.+++....
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE
Confidence 3459999999999999999999999999998876544 457999999999997665 57999999999999998875544
Q ss_pred ccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCCcceeeeee-----cCCCCcEEEEe--ccCCeEEEEEcCCeE
Q 019384 97 GKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASGQERTLVGT-----YPQPERVYSLS--LVGNRLVVATAGRHV 168 (342)
Q Consensus 97 ~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~-----~~~~~~v~~~s--~~~~~~~~~s~d~~v 168 (342)
..|...|.+++|+| ++.+|++|+.|++|++||++++... ..+.. ..+...+.++. .++..+++++.|++|
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~--~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 203 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV--ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE--EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE--EeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 45677899999999 8899999999999999998764321 11110 12334455554 456789999999999
Q ss_pred EEEeCCCCCCccc----------ccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCC
Q 019384 169 NVYDLRNMSQPEQ----------RRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEA 238 (342)
Q Consensus 169 ~iwd~~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~ 238 (342)
++||+++...... .....+...+.+++++|++..+++++.|+.+ ++||...... ...+.+|..
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v--~iwd~~~~~~--~~~l~~h~~--- 353 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV--LFWDKKSGNP--LLMLQGHRN--- 353 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE--EEEETTTCCE--EEEEECCSS---
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE--EEEECCCCeE--EEEECCCCC---
Confidence 9999986432110 0011223346789999999999999999976 4699864322 234455543
Q ss_pred CCceeeeeeEEEEcC------CCCeEEEecCCCeEEEEeCCC
Q 019384 239 GRDIVYPVNAIAFHP------IYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp------~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
.|.+++|+| ++.+|++|+.||+|+||+.+.
T Consensus 354 ------~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 354 ------SVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ------CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ------CEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 588999876 678999999999999999754
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.1e-32 Score=244.31 Aligned_cols=248 Identities=15% Similarity=0.206 Sum_probs=176.9
Q ss_pred eecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCce---eecccCCcceeEEEEeC--CCCEEEEeeCCCcEEEEcCC
Q 019384 57 FMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKE---DILGKHDAPVRCIEYSY--AAGQVITGSWDKSLKCWDPR 130 (342)
Q Consensus 57 ~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~---~~~~~h~~~V~~~~~~~--~~~~l~sgs~D~~I~iWd~~ 130 (342)
.+|.+.|.+++|++++. +++|+.|++|++|++.++.. ..+.+|...|++++|++ ++++|+||+.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 46999999999987655 57999999999999987642 35789999999999986 47899999999999999997
Q ss_pred CCCCcceeeeeecCCCCcEEEEecc--CCeEEEEEcCCeEEEEeCCCCCCcc-cccccccceeeEEEEEeeC--------
Q 019384 131 GASGQERTLVGTYPQPERVYSLSLV--GNRLVVATAGRHVNVYDLRNMSQPE-QRRESSLKYQTRCVRCYPN-------- 199 (342)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~v~~~s~~--~~~~~~~s~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~-------- 199 (342)
++.......+..+......++++++ +..+++++.|++|++||++...... ..........+.+++++|+
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 5432221222223333334445554 4579999999999999998642211 1111122334667788886
Q ss_pred ---------CceEEEEccCCeEEEEEeechhhhh-cccceeeeEEecCCCCceeeeeeEEEEcCCC----CeEEEecCCC
Q 019384 200 ---------GTGYALSSVEGRVAMEFFDLSEASQ-AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIY----GTFATGGCDG 265 (342)
Q Consensus 200 ---------~~~~~~~s~~~~~~i~~~d~~~~~~-~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~----~~l~sgs~Dg 265 (342)
+..+++++.|+.++ +||...... .....+.+|. .+|.+++|+|++ .+|++|+.|+
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~--lWd~~~~~~~~~~~~l~~h~---------~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIK--LWKEEEDGQWKEEQKLEAHS---------DWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCC--EEEECTTSCEEEEECCBCCS---------SCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred cccccCccccceEEEecCCCeEE--EEEeCCCCccceeeecccCC---------CceEEEEecCCCCCCCceEEEEcCCC
Confidence 36789999999875 588753211 1122334443 369999999987 7899999999
Q ss_pred eEEEEeCCCc---e-eeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 266 FVNVWDGNNK---K-RLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 266 ~I~iWd~~~~---~-~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
+|+|||.++. . ....+.+|...|++++|+|||++||+++.+. .|.+|+..
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~-----------~v~lw~~~ 292 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN-----------KVTLWKES 292 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS-----------CEEEEEEC
T ss_pred eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC-----------eEEEEEEC
Confidence 9999998762 1 1233456888999999999999999998766 47778764
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.5e-31 Score=245.42 Aligned_cols=260 Identities=15% Similarity=0.177 Sum_probs=187.0
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc--
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK-- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~-- 92 (342)
..|.+.|++|+|+|+|++||+|+.||+|+|||+.+++.. ...+|...|.++.+. +..+++++.|+.+++|+.....
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHH 222 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCE
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeeccccee
Confidence 467889999999999999999999999999999887654 456799999998885 3456799999999999987765
Q ss_pred eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc---CCeEEEE--EcCCe
Q 019384 93 EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV---GNRLVVA--TAGRH 167 (342)
Q Consensus 93 ~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~---~~~~~~~--s~d~~ 167 (342)
...+.+|...+.++.++|++..+++++.|+.|++||..+.............+...+.++.+. ++.++++ +.|++
T Consensus 223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~ 302 (420)
T 4gga_A 223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 302 (420)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE
T ss_pred eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE
Confidence 346789999999999999999999999999999999876543221112222333445555443 3355554 46899
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc--cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS--VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYP 245 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s--~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~ 245 (342)
|++||++++...... .....+.++.+++++..+++++ .++.+ ++||..... ....+.+|.. +
T Consensus 303 I~iwd~~t~~~~~~~---~~~~~v~~~~~~~~~~~lv~~sg~~d~~I--~iwd~~~~~--~v~~l~gH~~---------~ 366 (420)
T 4gga_A 303 IRIWNVCSGACLSAV---DAHSQVCSILWSPHYKELISGHGFAQNQL--VIWKYPTMA--KVAELKGHTS---------R 366 (420)
T ss_dssp EEEEETTTTEEEEEE---ECSSCEEEEEEETTTTEEEEEECTTTCCE--EEEETTTCC--EEEEECCCSS---------C
T ss_pred EEEEeCCccccceee---ccccceeeeeecCCCCeEEEEEecCCCEE--EEEECCCCc--EEEEEcCCCC---------C
Confidence 999999886432221 1223567788999999888765 55655 569986433 2344555643 6
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEE
Q 019384 246 VNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALS 292 (342)
Q Consensus 246 v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~ 292 (342)
|.+|+|+|+|.+|+||+.|++|+|||+.........+.+...+....
T Consensus 367 V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s 413 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSS 413 (420)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--------------
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccc
Confidence 99999999999999999999999999877655555554544443333
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.4e-31 Score=274.62 Aligned_cols=288 Identities=16% Similarity=0.186 Sum_probs=219.1
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCC--CC-eEEEecCCcEEEEEeccC
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDD--SS-GFSASADHTVRRLVFSHG 91 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~--~~-~~s~s~D~~i~~w~~~~~ 91 (342)
..|.+.|.+++|+|++++|++++.||+|+|||+.+++... ...|.+.|.+++|+++ .. +++++.|+.|++||+.++
T Consensus 654 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~ 733 (1249)
T 3sfz_A 654 KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK 733 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS
T ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc
Confidence 5789999999999999999999999999999998876544 4579999999999864 33 468999999999999988
Q ss_pred ce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceee-------------------------------
Q 019384 92 KE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTL------------------------------- 139 (342)
Q Consensus 92 ~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~------------------------------- 139 (342)
.. ..+.+|...|.+++|+|+++.|++++.|++|++||+++........
T Consensus 734 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 734 ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 74 4678999999999999999999999999999999986432100000
Q ss_pred ---------------------e-eecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEe
Q 019384 140 ---------------------V-GTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCY 197 (342)
Q Consensus 140 ---------------------~-~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 197 (342)
+ ..+........++.++..+++++.++.|++||+.+...... .......+.+++++
T Consensus 814 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~--~~~h~~~v~~v~~s 891 (1249)
T 3sfz_A 814 IVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVAD--CRGHLSWVHGVMFS 891 (1249)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEE--ECCCSSCEEEEEEC
T ss_pred EEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeee--cCCCccceEEEEEC
Confidence 0 01112223345556677899999999999999987532211 12334568899999
Q ss_pred eCCceEEEEccCCeEEEEEeechhhhhcccceeeeE------------------------EecCCC--CceeeeeeEEEE
Q 019384 198 PNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH------------------------RKSEAG--RDIVYPVNAIAF 251 (342)
Q Consensus 198 ~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h------------------------~~~~~~--~~~~~~v~~v~~ 251 (342)
|++..+++++.|+.+. +||............... ...... .....++.+++|
T Consensus 892 pdg~~l~s~s~dg~v~--vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 969 (1249)
T 3sfz_A 892 PDGSSFLTASDDQTIR--VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCL 969 (1249)
T ss_dssp TTSSEEEEEETTSCEE--EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEE
T ss_pred CCCCEEEEEeCCCeEE--EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEE
Confidence 9999999999999875 588754322111100000 000000 001135889999
Q ss_pred cCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 252 HPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 252 sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
+|+++++++|+.||.|++||..+++.+..+.+|...|.+++|+|||++|++++.+.
T Consensus 970 sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg 1025 (1249)
T 3sfz_A 970 SPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS 1025 (1249)
T ss_dssp CTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS
T ss_pred cCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999988888999999999999999999999998654
No 75
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.3e-31 Score=233.70 Aligned_cols=244 Identities=21% Similarity=0.296 Sum_probs=183.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~- 92 (342)
..|...|.+++|+|++++|++++.|++|+|||+.+++.. ....|.+.|.++.|++++. +++++.|+.|++||+.+++
T Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 578899999999999999999999999999999887644 4457999999999997665 5689999999999998876
Q ss_pred eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEe
Q 019384 93 EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYD 172 (342)
Q Consensus 93 ~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd 172 (342)
...+..|...|.+++|+|+++.|++++.|+.|++||+++.... ...............++.+++.+++++.|+.|++||
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 220 (312)
T 4ery_A 142 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 220 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee-eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 3567889999999999999999999999999999999764321 111111112233445666777999999999999999
Q ss_pred CCCCCCcccccccccc-eeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEE
Q 019384 173 LRNMSQPEQRRESSLK-YQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAF 251 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~ 251 (342)
+++.+.......+... ..+......+++..+++++.|+.+. +||...... ...+.+|.. .|.+++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~--vwd~~~~~~--~~~~~~h~~---------~v~~~~~ 287 (312)
T 4ery_A 221 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY--IWNLQTKEI--VQKLQGHTD---------VVISTAC 287 (312)
T ss_dssp TTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEE--EEETTTCCE--EEEECCCSS---------CEEEEEE
T ss_pred CCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEE--EEECCCchh--hhhhhccCC---------cEEEEee
Confidence 9876432211111111 1111222346678889999999865 599864322 223444432 6899999
Q ss_pred cCCCCeEEEec--CCCeEEEEeCC
Q 019384 252 HPIYGTFATGG--CDGFVNVWDGN 273 (342)
Q Consensus 252 sp~~~~l~sgs--~Dg~I~iWd~~ 273 (342)
+|++.+|++++ .|++|++|+.+
T Consensus 288 ~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 288 HPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSSEEEEEECTTTCCEEEEECC
T ss_pred cCcCCceEEEEccCCccEEEecCC
Confidence 99999999986 69999999864
No 76
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-32 Score=254.38 Aligned_cols=261 Identities=10% Similarity=0.054 Sum_probs=192.0
Q ss_pred CCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCcee
Q 019384 15 GNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKED 94 (342)
Q Consensus 15 ~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~ 94 (342)
+.+-..+|.+|+|||||+++||+|.|+||| |...++.. .+|.+.|.+++|+|++ .++.+.+|+.+... .
T Consensus 11 ~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l--~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~-~ 79 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI--NCNSKNLFHVKEFPLE------FENKLDFELAQQNG-L 79 (588)
T ss_dssp SCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC--SSBGGGTEEEEEECCC------CCCTTTTSCCCSSC-S
T ss_pred HhHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee--cCCCccEEEEEECCCC------CcceEEEEeCCCce-E
Confidence 355679999999999999999999999999 76554433 4799999999999987 46665555433222 1
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCC-----CCcEEEEeccCCeEEEEEcCCeEE
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQ-----PERVYSLSLVGNRLVVATAGRHVN 169 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~-----~~~v~~~s~~~~~~~~~s~d~~v~ 169 (342)
.-..|...|.+++|+|+|+.||+++.||+|++||.++ ....+. +.. ....++++++++.+++++.||+|+
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 2226688999999999999999999999999999542 111122 211 133455667788999999999999
Q ss_pred EEeCCCCCC--c----ccccc---cccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcc-ccee-eeEEecCC
Q 019384 170 VYDLRNMSQ--P----EQRRE---SSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAK-KYAF-KCHRKSEA 238 (342)
Q Consensus 170 iwd~~~~~~--~----~~~~~---~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~-~~~~-~~h~~~~~ 238 (342)
+||+..+.. + ..... ..+...+.+++|+|++ +++++.|+.++ +||........ ...+ .+|+.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr--lWd~~~~~~~~~~~tL~~~h~~--- 227 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF--SMTVSASSHQPVSRMIQNASRR--- 227 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE--EECCCSSSSCCCEEEEECCCSS---
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE--EEECCCCccccceeeecccccC---
Confidence 999987642 0 11110 1223468899999998 77888888775 58885433110 0122 23332
Q ss_pred CCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEE--CCCCCEEEEEEecc
Q 019384 239 GRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSF--SRDGRLLAVASSYT 307 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~--spdg~~las~s~~~ 307 (342)
.|.+|+|+ ++.||+++ |++|++||..+++......+|...|++++| |||+..|++++.++
T Consensus 228 ------~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 228 ------KITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp ------CCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred ------cEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 58999999 68999997 699999999988774433489999999999 99999999988666
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3e-31 Score=256.23 Aligned_cols=282 Identities=17% Similarity=0.235 Sum_probs=207.5
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee-c----CCceEEEEEeCCCCeEEEecCCcEEEEEeccC
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM-H----GGPVLDCCFHDDSSGFSASADHTVRRLVFSHG 91 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-h----~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~ 91 (342)
.|...|++++|+ ++++|++++.|++|++||+.+++....+. + ...+.++.|+.+..+++++.|+.+++|++.++
T Consensus 251 ~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 251 PVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHD 329 (615)
T ss_dssp CCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEE
T ss_pred ccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCC
Confidence 788999999999 99999999999999999998876555443 3 36778888876667789999999999998775
Q ss_pred ce-eecccCCcceeEEEEeCC---------------------------------CCEEEEeeCCCcEEEEcCCCCCCc--
Q 019384 92 KE-DILGKHDAPVRCIEYSYA---------------------------------AGQVITGSWDKSLKCWDPRGASGQ-- 135 (342)
Q Consensus 92 ~~-~~~~~h~~~V~~~~~~~~---------------------------------~~~l~sgs~D~~I~iWd~~~~~~~-- 135 (342)
+. ..+.+|...|.+++| |+ ++.|++++.|+.|++||+++....
T Consensus 330 ~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~ 408 (615)
T 1pgu_A 330 EVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQ 408 (615)
T ss_dssp EEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSC
T ss_pred cEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCC
Confidence 52 344555555555555 43 556666666777777765421100
Q ss_pred ---------------------------ceeeeeecCCCCcEEEEeccCCeEEEEEc-CCeEEEEeCCCCCCccccccccc
Q 019384 136 ---------------------------ERTLVGTYPQPERVYSLSLVGNRLVVATA-GRHVNVYDLRNMSQPEQRRESSL 187 (342)
Q Consensus 136 ---------------------------~~~~~~~~~~~~~v~~~s~~~~~~~~~s~-d~~v~iwd~~~~~~~~~~~~~~~ 187 (342)
....+....+...+.++.+.++.+++++. |+.|++||+.+..... ......
T Consensus 409 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~ 487 (615)
T 1pgu_A 409 PKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPL 487 (615)
T ss_dssp EEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCC
T ss_pred ceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCc
Confidence 00001111122334555555778999999 9999999998653211 122234
Q ss_pred ceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeee-EEecCCCCceeeeeeEEEEcC----------CCC
Q 019384 188 KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKC-HRKSEAGRDIVYPVNAIAFHP----------IYG 256 (342)
Q Consensus 188 ~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~-h~~~~~~~~~~~~v~~v~~sp----------~~~ 256 (342)
...+.+++++|+++.+++++.++.+. +||........ .+.+ | ..+|++++|+| +++
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~--iw~~~~~~~~~--~~~~~h---------~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKIL--LYDLQSREVKT--SRWAFR---------TSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEE--EEETTTTEEEE--CCSCCC---------SSCEEEEEECCCC------CCSCC
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEE--EeeCCCCccee--EeecCC---------CCceeEEEEcCccccccccccCCC
Confidence 45688999999999999999999865 59986543221 1222 3 23699999999 999
Q ss_pred eEEEecCCCeEEEEeCCCc-eeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 257 TFATGGCDGFVNVWDGNNK-KRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 257 ~l~sgs~Dg~I~iWd~~~~-~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
+|++|+.||+|++||++++ +.+..+.+|...|.+++|+|||+ |++++.+. .|.+|+++
T Consensus 555 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~-----------~v~iw~~~ 613 (615)
T 1pgu_A 555 LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA-----------CIKRWNVV 613 (615)
T ss_dssp EEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTS-----------CEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCc-----------eEEEEeee
Confidence 9999999999999999987 77888999999999999999999 99988776 69999874
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.1e-32 Score=250.89 Aligned_cols=270 Identities=16% Similarity=0.141 Sum_probs=195.0
Q ss_pred CeEEEEEcCCCCeEE-EEeCCCcEEEEECCCc-e----eeeeeecCCceEEEEEeC-CCC-eEEEecCCcEEEEEeccCc
Q 019384 21 GISNLRFSNHSDHLL-VSSWDKSVRLYDASAN-V----LRGEFMHGGPVLDCCFHD-DSS-GFSASADHTVRRLVFSHGK 92 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~-s~s~Dgti~vwd~~~~-~----~~~~~~h~~~V~~~~~~~-~~~-~~s~s~D~~i~~w~~~~~~ 92 (342)
....++++|+...++ +++.||+|+|||+... + .....+|.+.|.+++|++ ++. +++++.|++|++|++.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 445688998875544 6789999999998653 2 223457999999999987 555 5689999999999998763
Q ss_pred --------eeecccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEE
Q 019384 93 --------EDILGKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVV 161 (342)
Q Consensus 93 --------~~~~~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~ 161 (342)
...+.+|...|.+++|+|++ ..|++++.|++|++||++++.. ...+....+...+.++.+ +++.+++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEE
Confidence 34567899999999999998 6999999999999999975432 122210223444555554 5678999
Q ss_pred EEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEE---ccCCeEEEEEeechhhhhcccceeeeEEecCC
Q 019384 162 ATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALS---SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEA 238 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~ 238 (342)
++.|+.|++||++++.........+....+.++.++|++..++++ +.++.+ .+||.+........ ...
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i--~iwd~~~~~~~~~~-~~~------ 264 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQV--ALWDTKHLEEPLSL-QEL------ 264 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEE--EEEETTBCSSCSEE-EEC------
T ss_pred EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceE--EEEcCccccCCceE-Eec------
Confidence 999999999999886432221111222236788899999988888 566654 66998653321111 110
Q ss_pred CCceeeeeeEEEEcCCCCeEE-EecCCCeEEEEeCCCcee-eeccCC--CCcceEEEEECCCCCEEEEE
Q 019384 239 GRDIVYPVNAIAFHPIYGTFA-TGGCDGFVNVWDGNNKKR-LYQYSK--YPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~-sgs~Dg~I~iWd~~~~~~-~~~~~~--~~~~V~~v~~spdg~~las~ 303 (342)
.+...+.+++|+|++++|+ +|+.||.|++||+.+++. +..+.. |...|.+++|+||+.+++++
T Consensus 265 --~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 265 --DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp --CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG
T ss_pred --cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec
Confidence 1112588999999999885 667899999999988763 333332 56899999999999998754
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-30 Score=238.87 Aligned_cols=248 Identities=13% Similarity=0.132 Sum_probs=186.0
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc--e
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK--E 93 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~--~ 93 (342)
.|...|++++|+|++++|++|+.||+|+|||+.+++.. ....|.+.|.+++|. +..+++++.|+.|++|++.... .
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCccee
Confidence 47889999999999999999999999999999877644 445799999999994 4567899999999999998544 4
Q ss_pred eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCC-eEEEEE--cCCeEEE
Q 019384 94 DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGN-RLVVAT--AGRHVNV 170 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~-~~~~~s--~d~~v~i 170 (342)
..+.+|...|.+++|+|++..|++|+.|++|++||+++... ...+..+......+.++.++. .+++++ .|+.|++
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP--KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE--EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc--cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 56788999999999999999999999999999999975332 222223333334445555444 455554 6999999
Q ss_pred EeCCCCCCcccccccccceeeEEEEEeeCCceEEEE--ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE
Q 019384 171 YDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALS--SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA 248 (342)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~ 248 (342)
||++++..... . .....+.+++++|++..++++ ..++.+ ++||...........+..|. ..|.+
T Consensus 289 ~d~~~~~~~~~-~--~~~~~v~~~~~s~~~~~l~~~~g~~dg~i--~v~~~~~~~~~~~~~~~~h~---------~~v~~ 354 (401)
T 4aez_A 289 WNAATGARVNT-V--DAGSQVTSLIWSPHSKEIMSTHGFPDNNL--SIWSYSSSGLTKQVDIPAHD---------TRVLY 354 (401)
T ss_dssp EETTTCCEEEE-E--ECSSCEEEEEECSSSSEEEEEECTTTCEE--EEEEEETTEEEEEEEEECCS---------SCCCE
T ss_pred EECCCCCEEEE-E--eCCCcEEEEEECCCCCeEEEEeecCCCcE--EEEecCCccceeEEEecCCC---------CCEEE
Confidence 99988643222 1 233468899999999999884 467765 56888654333333344443 26999
Q ss_pred EEEcCCCCeEEEecCCCeEEEEeCCCceeeecc
Q 019384 249 IAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQY 281 (342)
Q Consensus 249 v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~ 281 (342)
++|+|++.+|++++.||+|++||+.+++.+...
T Consensus 355 ~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 355 SALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 999999999999999999999999988766543
No 80
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-31 Score=251.71 Aligned_cols=252 Identities=8% Similarity=0.006 Sum_probs=183.6
Q ss_pred CCCCCeEEEEEcCC------CCeEEEEeCCCcEEEEECCCcee------------eeeeecCCceEEEEEeCCCCeEEEe
Q 019384 17 PPSDGISNLRFSNH------SDHLLVSSWDKSVRLYDASANVL------------RGEFMHGGPVLDCCFHDDSSGFSAS 78 (342)
Q Consensus 17 ~~~~~V~~l~fs~~------~~~l~s~s~Dgti~vwd~~~~~~------------~~~~~h~~~V~~~~~~~~~~~~s~s 78 (342)
.|.+.|++|+|+|+ +.+|||++.||+|+|||+..+.. ....+|.+.|.+++|++++.+++|+
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs 284 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGF 284 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 35678999999997 57999999999999999976531 1344689999999998777888999
Q ss_pred cCCcEEEEEeccCce--eecccCCcceeEE--EEeCCC-CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCC--CCcEEE
Q 019384 79 ADHTVRRLVFSHGKE--DILGKHDAPVRCI--EYSYAA-GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQ--PERVYS 151 (342)
Q Consensus 79 ~D~~i~~w~~~~~~~--~~~~~h~~~V~~~--~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~--~~~v~~ 151 (342)
.|++|++||+.++.. ..+.+|...|+++ +|++++ .+|+|||.|++|+|||+++... ...+..+.. ....++
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~--~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT--TKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH--HCEEEEECSCCSCCCEE
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc--ccccccccccCcccceE
Confidence 999999999987642 3578999999999 567777 8899999999999999875322 112222211 123356
Q ss_pred EeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc------
Q 019384 152 LSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA------ 225 (342)
Q Consensus 152 ~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~------ 225 (342)
+++++..+++++.|++|++||+++........ .+...+.+++++|+++.+++++.|+++++ ||.......
T Consensus 363 fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~--gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l--wd~~~~~~~~~~~~~ 438 (524)
T 2j04_B 363 YCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV--SRETTITAIGVSRLHPMVLAGSADGSLII--TNAARRLLHGIKNSS 438 (524)
T ss_dssp EETTTTEEEEECSSSEEEEEETTCTTCCEEEE--ECSSCEEEEECCSSCCBCEEEETTTEEEC--CBSCSSTTTCC----
T ss_pred eCCCcCeEEEeCCCCcEEEEECcccccceeee--cCCCceEEEEeCCCCCeEEEEECCCEEEE--EechHhhccccccCc
Confidence 77777789999999999999999865432211 23456889999999999999999998754 775321000
Q ss_pred ------ccceeeeEEe---------------------cCCCCceeeeeeEEEEcCCCC---eEEEecCCCeEEEEeCCC
Q 019384 226 ------KKYAFKCHRK---------------------SEAGRDIVYPVNAIAFHPIYG---TFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 226 ------~~~~~~~h~~---------------------~~~~~~~~~~v~~v~~sp~~~---~l~sgs~Dg~I~iWd~~~ 274 (342)
..+.+..... .....++..+|++|+|+|+++ +||+|+.||+|+||+++.
T Consensus 439 ~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 439 ATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp --CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred cceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0001110000 000123345799999999964 899999999999999774
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-29 Score=237.51 Aligned_cols=264 Identities=19% Similarity=0.247 Sum_probs=199.2
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee-eecCCceEEEEEe--CCC-CeEEEecCCcEEEEEeccC
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFH--DDS-SGFSASADHTVRRLVFSHG 91 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~--~~~-~~~s~s~D~~i~~w~~~~~ 91 (342)
..|.+.|++++|++++ +|++|+.||+|+|||+.+++.... .+|.+.|.+++|. +++ .+++++.|+.+++|++.+.
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCC
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCC
Confidence 4789999999999988 999999999999999988765544 4699999999997 343 4679999999999999876
Q ss_pred c------------------------eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCC
Q 019384 92 K------------------------EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPE 147 (342)
Q Consensus 92 ~------------------------~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~ 147 (342)
. ...+.+|...|.++ +++++.|++|+.|++|++||+++... ...+.. +..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~--~~~ 311 (464)
T 3v7d_B 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC--LYILSG--HTD 311 (464)
T ss_dssp CCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE--EEEECC--CSS
T ss_pred cccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE--EEEecC--CCC
Confidence 4 12456788888887 45688999999999999999975432 122222 334
Q ss_pred cEEE--EeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc
Q 019384 148 RVYS--LSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA 225 (342)
Q Consensus 148 ~v~~--~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 225 (342)
.+.+ ++.+++.+++++.|+.|++||+++++..... ......+.++.++ +..+++++.|+.+ ++||.......
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~--~~~l~s~s~dg~v--~vwd~~~~~~~ 385 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL--QGHTALVGLLRLS--DKFLVSAAADGSI--RGWDANDYSRK 385 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEC--SSEEEEEETTSEE--EEEETTTCCEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE--eCCCCcEEEEEEc--CCEEEEEeCCCcE--EEEECCCCcee
Confidence 4544 4556679999999999999999886432221 1233456777765 5789999999976 45998643211
Q ss_pred ccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec-cCCCCcceEEEEECCCCCEEEEEE
Q 019384 226 KKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ-YSKYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 226 ~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~-~~~~~~~V~~v~~spdg~~las~s 304 (342)
...+.. ..+..++|+|++.+|++|+ ||+|++||+++++.+.. +..|...|++++|+ ++.+++++
T Consensus 386 ----~~~~~~--------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~ 450 (464)
T 3v7d_B 386 ----FSYHHT--------NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAV 450 (464)
T ss_dssp ----EEEECT--------TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEE
T ss_pred ----eeecCC--------CCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEE
Confidence 112211 1467789999999999998 99999999999998875 67889999999997 55555555
Q ss_pred ecc
Q 019384 305 SYT 307 (342)
Q Consensus 305 ~~~ 307 (342)
+.+
T Consensus 451 ~~~ 453 (464)
T 3v7d_B 451 EKD 453 (464)
T ss_dssp EET
T ss_pred EeC
Confidence 443
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=4.3e-31 Score=238.61 Aligned_cols=246 Identities=15% Similarity=0.180 Sum_probs=185.4
Q ss_pred CCCCCeEEEEEcCC----CCeEEEEeCCCcEEEEECCCceeeee-eecCCceEEEEEeC-CCC-eEEEecCCcEEEEEec
Q 019384 17 PPSDGISNLRFSNH----SDHLLVSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFHD-DSS-GFSASADHTVRRLVFS 89 (342)
Q Consensus 17 ~~~~~V~~l~fs~~----~~~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~~-~~~-~~s~s~D~~i~~w~~~ 89 (342)
.|...|++++|+|+ +++|++|+.||+|+|||+.+++.... ..|.+.|.+++|++ ++. +++++.|+.|++|++.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 36788999999999 66899999999999999988765554 46999999999987 655 5689999999999998
Q ss_pred cCcee-ec---ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeee------------------------
Q 019384 90 HGKED-IL---GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVG------------------------ 141 (342)
Q Consensus 90 ~~~~~-~~---~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~------------------------ 141 (342)
+++.. .+ .+|...|.+++|+|+++.|++++.|+.|++||+++.... ..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMM--NAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHH--HHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccc--cccceeEEecCCCCcccccceeeccCcc
Confidence 87743 33 689999999999999999999999999999998753211 0000
Q ss_pred --ecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCccccc------------ccccceeeEEEEEeeC--CceEEE
Q 019384 142 --TYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRR------------ESSLKYQTRCVRCYPN--GTGYAL 205 (342)
Q Consensus 142 --~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~------------~~~~~~~~~~v~~~~~--~~~~~~ 205 (342)
...+...+.++.++++.+++++.|+.|++||+++........ .......+.+++++|+ +..+++
T Consensus 225 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 225 STRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp EECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred ccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 001334455666668899999999999999998764421111 0111223556788898 999999
Q ss_pred EccCCeEEEEEeechhhhhcc--cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 206 SSVEGRVAMEFFDLSEASQAK--KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 206 ~s~~~~~~i~~~d~~~~~~~~--~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
++.++.+. +||........ ...+..|. +..+|.+++|+|++++|++|+.||.|++||+.
T Consensus 305 ~~~dg~i~--vwd~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 305 GNQVGKLY--VWDLEVEDPHKAKCTTLTHHK-------CGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECTTSCEE--EEECCSSSGGGCEEEEECCTT-------CCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EecCCcEE--EEECCCCCCccccceEEcccc-------cCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999865 58886543221 11233331 12369999999999999999999999999975
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.98 E-value=2.5e-30 Score=254.58 Aligned_cols=248 Identities=22% Similarity=0.266 Sum_probs=181.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee-eeeeecCCceEEEEEeCCC-CeEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL-RGEFMHGGPVLDCCFHDDS-SGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~-~~~~~h~~~V~~~~~~~~~-~~~s~s~D~~i~~w~~~~~~~ 93 (342)
..|...|++++|+|++++|+||+.||+|+|||+.++.. ....+|.+.|.+++|++++ .+++++.|++|++|+......
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 57899999999999999999999999999999988764 4456899999999999765 567999999999999765443
Q ss_pred ee----cccCCcceeEEEEeCCC--CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCe
Q 019384 94 DI----LGKHDAPVRCIEYSYAA--GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRH 167 (342)
Q Consensus 94 ~~----~~~h~~~V~~~~~~~~~--~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~ 167 (342)
.. ..+|...|.+++|+|++ ..|++|+.|++|++||+++... ...+..+......++++.+++.+++++.|++
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 22 25799999999999986 5799999999999999975432 2223333333333445556779999999999
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEec----------C
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKS----------E 237 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~----------~ 237 (342)
|++||+++++..... .....+.+++++|++..++++. ++. +++||+........+ ..+... .
T Consensus 585 i~iwd~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~-~~~--i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 656 (694)
T 3dm0_A 585 VLLWDLAEGKKLYSL---EANSVIHALCFSPNRYWLCAAT-EHG--IKIWDLESKSIVEDL--KVDLKAEAEKADNSGPA 656 (694)
T ss_dssp CEEEETTTTEEEECC---BCSSCEEEEEECSSSSEEEEEE-TTE--EEEEETTTTEEEEEE--CCCCC------------
T ss_pred EEEEECCCCceEEEe---cCCCcEEEEEEcCCCcEEEEEc-CCC--EEEEECCCCCChhhh--ccccccccccccccccc
Confidence 999999886432211 1233578899999988776655 444 567998654322211 111000 0
Q ss_pred CCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 238 AGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 238 ~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
........+++++|+|+|++|++|+.||+|+|||+.
T Consensus 657 ~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 657 ATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ----CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 001111237889999999999999999999999975
No 84
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=1.5e-29 Score=235.90 Aligned_cols=262 Identities=18% Similarity=0.266 Sum_probs=201.6
Q ss_pred CCCCCCe-EEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGI-SNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V-~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|.+.| .++ ++++++|++|+.||+|+|||+.+++.. ...+|.+.|.++.|. +..+++++.|++|++|++.+++.
T Consensus 115 ~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~ 191 (445)
T 2ovr_B 115 KGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETGEC 191 (445)
T ss_dssp ECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEE
T ss_pred cccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECCcCcE
Confidence 4677765 554 556899999999999999999887654 445799999999997 45778999999999999988773
Q ss_pred -eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEe
Q 019384 94 -DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYD 172 (342)
Q Consensus 94 -~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd 172 (342)
..+.+|...|.+++|+ ++.|++|+.|++|++||++++.. ...+. .+...+.++.++++.+++++.|+.|++||
T Consensus 192 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~--~~~~~--~~~~~v~~~~~~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 192 IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC--LHVLM--GHVAAVRCVQYDGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE--EEEEE--CCSSCEEEEEECSSCEEEEETTSCEEEEE
T ss_pred EEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE--EEEEc--CCcccEEEEEECCCEEEEEcCCCEEEEEE
Confidence 4678899999999996 57899999999999999875432 12222 24456777888889999999999999999
Q ss_pred CCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc
Q 019384 173 LRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH 252 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s 252 (342)
+++....... ......+.++.+ ++..+++++.|+.+. +||.+.... ...+..|.. .+.++.+
T Consensus 266 ~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~--i~d~~~~~~--~~~~~~~~~---------~v~~~~~- 327 (445)
T 2ovr_B 266 PETETCLHTL--QGHTNRVYSLQF--DGIHVVSGSLDTSIR--VWDVETGNC--IHTLTGHQS---------LTSGMEL- 327 (445)
T ss_dssp GGGTEEEEEE--CCCSSCEEEEEE--CSSEEEEEETTSCEE--EEETTTCCE--EEEECCCCS---------CEEEEEE-
T ss_pred CCCCcEeEEe--cCCCCceEEEEE--CCCEEEEEeCCCeEE--EEECCCCCE--EEEEcCCcc---------cEEEEEE-
Confidence 9875332211 122334666666 788899999999865 599865432 222333322 4666666
Q ss_pred CCCCeEEEecCCCeEEEEeCCCceeeeccCC---CCcceEEEEECCCCCEEEEEEecc
Q 019384 253 PIYGTFATGGCDGFVNVWDGNNKKRLYQYSK---YPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 253 p~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~---~~~~V~~v~~spdg~~las~s~~~ 307 (342)
++.+|++|+.||+|++||.++++.+..+.. |...|.+++|+ +.+|++++.++
T Consensus 328 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg 382 (445)
T 2ovr_B 328 -KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDG 382 (445)
T ss_dssp -ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTS
T ss_pred -eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCC
Confidence 467999999999999999999888887765 88899999995 58999998755
No 85
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=5e-30 Score=229.18 Aligned_cols=249 Identities=16% Similarity=0.239 Sum_probs=185.4
Q ss_pred eecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-----eeecccCCcceeEEEEeC--CCCEEEEeeCCCcEEEEc
Q 019384 57 FMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK-----EDILGKHDAPVRCIEYSY--AAGQVITGSWDKSLKCWD 128 (342)
Q Consensus 57 ~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~-----~~~~~~h~~~V~~~~~~~--~~~~l~sgs~D~~I~iWd 128 (342)
.+|.+.|.+++|++++. +++++.|+.|++|++.+.. ...+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 46999999999997765 5689999999999998753 234578999999999999 589999999999999999
Q ss_pred CCCCCCcc-----eeeeeecCCCCcEEEEec--c--CCeEEEEEcCCeEEEEeCCCCCCccccc-----------ccccc
Q 019384 129 PRGASGQE-----RTLVGTYPQPERVYSLSL--V--GNRLVVATAGRHVNVYDLRNMSQPEQRR-----------ESSLK 188 (342)
Q Consensus 129 ~~~~~~~~-----~~~~~~~~~~~~v~~~s~--~--~~~~~~~s~d~~v~iwd~~~~~~~~~~~-----------~~~~~ 188 (342)
+++..... ........+...+.++.+ + ++.+++++.|+.|++||+++........ .....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence 87643211 111111223444555555 4 6689999999999999998765321110 00223
Q ss_pred eeeEEEEEeeC---CceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCC----CeEEEe
Q 019384 189 YQTRCVRCYPN---GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIY----GTFATG 261 (342)
Q Consensus 189 ~~~~~v~~~~~---~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~----~~l~sg 261 (342)
..+.++.++|+ +..+++++.++.+ .+|+...........+.+|. .+|.+++|+|++ .+|++|
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~---------~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQAI--IYQRGKDGKLHVAAKLPGHK---------SLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTEEE--EEEECTTSCEEEEEECCCCC---------SCEEEEEECCCSSCSSEEEEEE
T ss_pred cceeEEEeccCCCCCcEEEEecCCCcE--EEEccCCCceeeeeecCCCC---------cceeEEEECCCCCCcceEEEEE
Confidence 45688999997 8889999888876 33444322211122333333 369999999998 799999
Q ss_pred cCCCeEEEEeCCCc----------------------------------------------eeeeccCCCCcceEEEEECC
Q 019384 262 GCDGFVNVWDGNNK----------------------------------------------KRLYQYSKYPTSIAALSFSR 295 (342)
Q Consensus 262 s~Dg~I~iWd~~~~----------------------------------------------~~~~~~~~~~~~V~~v~~sp 295 (342)
+.||+|++||++.+ +.+..+.+|...|++++|+|
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp ETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 99999999998754 56677889999999999999
Q ss_pred CCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 296 DGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 296 dg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
||++|++++.++ .|.+|+++.
T Consensus 317 ~~~~l~s~~~dg-----------~v~iw~~~~ 337 (351)
T 3f3f_A 317 TGTILSSAGDDG-----------KVRLWKATY 337 (351)
T ss_dssp SSCCEEEEETTS-----------CEEEEEECT
T ss_pred CCCEEEEecCCC-----------cEEEEecCc
Confidence 999999999766 588888763
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.6e-31 Score=243.40 Aligned_cols=244 Identities=13% Similarity=0.188 Sum_probs=173.5
Q ss_pred ecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCc---eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCC
Q 019384 58 MHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGK---EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGAS 133 (342)
Q Consensus 58 ~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~---~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~ 133 (342)
.+.++|.+++|++++.+ ++++.|+.|++|++.++. ...+.+|...|.+++|+|++++|++++.|++|++||+++..
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 36789999999987765 577899999999999873 34578899999999999999999999999999999997644
Q ss_pred -CcceeeeeecCCCCcEEEEec--cCCeEEEEEcCCeEEEEeCCCCCC--cccccccccceeeEEEEEeeCCceEEEEcc
Q 019384 134 -GQERTLVGTYPQPERVYSLSL--VGNRLVVATAGRHVNVYDLRNMSQ--PEQRRESSLKYQTRCVRCYPNGTGYALSSV 208 (342)
Q Consensus 134 -~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~ 208 (342)
......+. .+...+.++.+ +++.+++++.|+.|++||++.... ........+...+.+++++|+++.+++++.
T Consensus 89 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 89 TWKQTLVLL--RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CCCCEEECC--CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred ceeeeeEec--ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 11111122 23445555555 566899999999999999987642 111222224556889999999999999999
Q ss_pred CCeEEEEEeechhhhhccc-----c--eeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCcee----
Q 019384 209 EGRVAMEFFDLSEASQAKK-----Y--AFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKR---- 277 (342)
Q Consensus 209 ~~~~~i~~~d~~~~~~~~~-----~--~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~---- 277 (342)
|+.+. +||+........ + .+......... .+..+|.+++|+|++++|++|+.||+|++||+.+++.
T Consensus 167 d~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 167 DRKAY--VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp SSCEE--EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred CCEEE--EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 99875 588742110000 0 00000000000 3334699999999999999999999999999998876
Q ss_pred eeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 278 LYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 278 ~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
+..+.+|...|.+++|+|||++|++++.+
T Consensus 244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 244 LITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred eEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 78888999999999999999999988643
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.7e-31 Score=260.08 Aligned_cols=247 Identities=18% Similarity=0.243 Sum_probs=186.4
Q ss_pred CCCCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCc--ee-eeeeecCCceEEEEEeCC---CCeEEEecCCcEEEEE
Q 019384 14 LGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASAN--VL-RGEFMHGGPVLDCCFHDD---SSGFSASADHTVRRLV 87 (342)
Q Consensus 14 ~~~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~--~~-~~~~~h~~~V~~~~~~~~---~~~~s~s~D~~i~~w~ 87 (342)
+..+|.+.|++++|+|++++|++|+.||+|+|||+..+ .. ....+|.++|.+++|+++ ..+++++.|+.|++|+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 34689999999999999999999999999999999743 33 344579999999999754 4567999999999999
Q ss_pred eccCc---eeecccCCcceeEEEEeCC--CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc-------
Q 019384 88 FSHGK---EDILGKHDAPVRCIEYSYA--AGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV------- 155 (342)
Q Consensus 88 ~~~~~---~~~~~~h~~~V~~~~~~~~--~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~------- 155 (342)
+.++. ...+.+|...|.+++|+|+ ++.|++|+.|++|++||+++........+.. +...+.++.+.
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~--~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEED 161 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC--CSSCEEEEEECCCC----
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec--CCCceEEEEecCcccccc
Confidence 99875 3456789999999999999 8999999999999999998653322222222 33445555543
Q ss_pred --------CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccc
Q 019384 156 --------GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKK 227 (342)
Q Consensus 156 --------~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~ 227 (342)
++.+++++.|+.|++||+++..... .. .
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-----------~~---------------------------------~ 197 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------VL---------------------------------E 197 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEE-----------EE---------------------------------E
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccc-----------ee---------------------------------e
Confidence 4578888888888888876532100 00 0
Q ss_pred ceeeeEEecCCCCceeeeeeEEEEcCC---CCeEEEecCCCeEEEEeCCCce-----eeeccCCCCcceEEEEECCCCCE
Q 019384 228 YAFKCHRKSEAGRDIVYPVNAIAFHPI---YGTFATGGCDGFVNVWDGNNKK-----RLYQYSKYPTSIAALSFSRDGRL 299 (342)
Q Consensus 228 ~~~~~h~~~~~~~~~~~~v~~v~~sp~---~~~l~sgs~Dg~I~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~ 299 (342)
..+.+|. .+|.+++|+|+ +.+|++|+.||+|++||..++. .+.....|...|++++|+|||++
T Consensus 198 ~~~~~h~---------~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 198 STLEGHS---------DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp EEECCCS---------SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred eeecCCC---------CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE
Confidence 0111222 26899999999 8999999999999999998753 33445568899999999999999
Q ss_pred EEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 300 LAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 300 las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
|++++.++ .|.+|++.
T Consensus 269 l~s~s~Dg-----------~I~vwd~~ 284 (753)
T 3jro_A 269 LALSGGDN-----------KVTLWKEN 284 (753)
T ss_dssp EEEECSSS-----------CEECCBCC
T ss_pred EEEEcCCC-----------EEEEEecC
Confidence 99998755 36666665
No 88
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=5.1e-30 Score=235.75 Aligned_cols=279 Identities=16% Similarity=0.141 Sum_probs=180.7
Q ss_pred CCeEEEEEc---CCCCeEEEEeCCCcEEEEECCCc----------eeeeeeecCCceEEEEEeC----------------
Q 019384 20 DGISNLRFS---NHSDHLLVSSWDKSVRLYDASAN----------VLRGEFMHGGPVLDCCFHD---------------- 70 (342)
Q Consensus 20 ~~V~~l~fs---~~~~~l~s~s~Dgti~vwd~~~~----------~~~~~~~h~~~V~~~~~~~---------------- 70 (342)
...+.+.|. +++..|++++.|+.|++|+.... ..+....+...+..+.|.+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVN 95 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC---------
T ss_pred CCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCccee
Confidence 355677774 45556777778999999986321 1122234455555555432
Q ss_pred ----CC-CeEEEecCCcEEEEEeccCce------eecccCCcceeEEEEeC--------CCCEEEEeeCCCcEEEEcCCC
Q 019384 71 ----DS-SGFSASADHTVRRLVFSHGKE------DILGKHDAPVRCIEYSY--------AAGQVITGSWDKSLKCWDPRG 131 (342)
Q Consensus 71 ----~~-~~~s~s~D~~i~~w~~~~~~~------~~~~~h~~~V~~~~~~~--------~~~~l~sgs~D~~I~iWd~~~ 131 (342)
++ .+++++.|++|++|+...+.. ..+.+|.+.|++++|+| ++++|+|||.|++|||||+++
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 22 356899999999999988753 23679999999999997 788999999999999999865
Q ss_pred CCCcceeeeeecCCCCcEEEEeccC---CeEEEEEcCCeEEEEeCCCCCCcccccc-----------------------c
Q 019384 132 ASGQERTLVGTYPQPERVYSLSLVG---NRLVVATAGRHVNVYDLRNMSQPEQRRE-----------------------S 185 (342)
Q Consensus 132 ~~~~~~~~~~~~~~~~~v~~~s~~~---~~~~~~s~d~~v~iwd~~~~~~~~~~~~-----------------------~ 185 (342)
... ..... .+...+.++.+.+ +.+++++.|++|++||+++......... .
T Consensus 176 ~~~--~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 176 EGP--ILAGY--PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp TEE--EEEEE--ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred Cce--eeeec--CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 322 11122 2334555665543 3689999999999999987643211000 0
Q ss_pred ccceeeEEEEEe-eCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCC----------CceeeeeeEEEEcC-
Q 019384 186 SLKYQTRCVRCY-PNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAG----------RDIVYPVNAIAFHP- 253 (342)
Q Consensus 186 ~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~----------~~~~~~v~~v~~sp- 253 (342)
.....+.++.++ +++..+++++.|+.+. +||+........ +..|...... .... ....+.|+|
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~--vwd~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 326 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWL--RWNLFANNDYNE--ISDSTMKLGPKNLLPNVQGISLFP-SLLGACPHPR 326 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEE--EEEC---------------------CCSCSEEEECSSC-CSSCCEECSS
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEE--EEECccCCCCce--EeeecCccccEEEccccccccccC-cceeEEEccC
Confidence 111234566665 7899999999999765 588764332211 1222111000 0001 122334544
Q ss_pred -CCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 254 -IYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 254 -~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
++.++++|+.||+|+|||..+++.+..+.+|...|.+++|||||++||+++.++
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 344678899999999999999888777778889999999999999999998665
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-31 Score=249.22 Aligned_cols=294 Identities=12% Similarity=0.136 Sum_probs=198.1
Q ss_pred cCCCCCCCccCCCCCCCCeEEEEE----------cCCCCeEEEEeCCCcEEEEECCCceeeee-eecCCceEEEEEeC-C
Q 019384 4 VHPPPTSGRELGNPPSDGISNLRF----------SNHSDHLLVSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFHD-D 71 (342)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~V~~l~f----------s~~~~~l~s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~~-~ 71 (342)
+|+||...+.-...+...+..+.+ +|+++.+++++ +|+.....+... .+|.+.|.+++|++ +
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~~~~------~w~~~g~~~~~~~~~h~~~V~~~~~s~~~ 75 (437)
T 3gre_A 2 GHHHHHHGEGDVESIEKFLSTFKILPPLRDYKEFGPIQEIVRSPN------MGNLRGKLIATLMENEPNSITSSAVSPGE 75 (437)
T ss_dssp ------------CCCGGGTTCC-CCCCGGGCGGGCCCCCCCCCCC------GGGCCCCEEEEECTTTTSCEEEEEEECSS
T ss_pred CccccccCCCChhHHHHHhccCCCCCChhchhhcCCccccccccc------cccccceEEeeeccCCCCceEEEEECCCC
Confidence 578888888777766665555554 55666676654 488665544455 57899999999998 6
Q ss_pred CC-eEEEecCCcEEEEEecc---Cc---eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCC-CCcceeeee--
Q 019384 72 SS-GFSASADHTVRRLVFSH---GK---EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGA-SGQERTLVG-- 141 (342)
Q Consensus 72 ~~-~~s~s~D~~i~~w~~~~---~~---~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~-~~~~~~~~~-- 141 (342)
+. +++|+.|++|++|++.+ +. .....+|...|.+++|+|+++.|++|+.|++|++||++.. .+.......
T Consensus 76 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 155 (437)
T 3gre_A 76 TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE 155 (437)
T ss_dssp SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc
Confidence 64 57999999999999876 32 1222369999999999999999999999999999998411 111111111
Q ss_pred ---ec---C--CCCcEEEEe----ccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccC
Q 019384 142 ---TY---P--QPERVYSLS----LVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE 209 (342)
Q Consensus 142 ---~~---~--~~~~v~~~s----~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~ 209 (342)
.. . ....+.++. .++..+++++.|+.|++||+++.+.............+.+++++|++..+++++.|
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 156 CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 00 1 223344433 23668999999999999999886543222221134578999999999999999999
Q ss_pred CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc----CCCCeEEEecCCCeEEEEeCCCceeeeccCC--
Q 019384 210 GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH----PIYGTFATGGCDGFVNVWDGNNKKRLYQYSK-- 283 (342)
Q Consensus 210 ~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s----p~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~-- 283 (342)
+.+. +||++.......+.+ . +..+|.+++|+ |++.+|++|+.||+|++||+++++++..+.+
T Consensus 236 g~i~--iwd~~~~~~~~~~~~-~---------~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 236 GIID--IWDIRFNVLIRSWSF-G---------DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp SCEE--EEETTTTEEEEEEBC-T---------TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CeEE--EEEcCCccEEEEEec-C---------CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 9865 599865332222111 1 12368999554 5688999999999999999998876655442
Q ss_pred ------------------------CCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 284 ------------------------YPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 284 ------------------------~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
|...|++++|+ ++++|++++.+. .|.+|++..
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~-----------~i~~wd~~~ 359 (437)
T 3gre_A 304 EQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATS-----------SIVMFSLNE 359 (437)
T ss_dssp SCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGT-----------EEEEEETTC
T ss_pred CCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCC-----------eEEEEECCC
Confidence 55678899999 789999988765 477777654
No 90
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-30 Score=244.40 Aligned_cols=259 Identities=13% Similarity=0.086 Sum_probs=189.7
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCC-----ceEEEEEeCCCCe-EEEecCCcEEEEEecc
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGG-----PVLDCCFHDDSSG-FSASADHTVRRLVFSH 90 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~-----~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~ 90 (342)
.|.+.|++++|||+|++||+++.||+|+|||..+ +...+.|.. .|.+++|+|+++. ++|+.|++|++|++..
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 6688999999999999999999999999999654 444333665 4999999987765 6899999999999988
Q ss_pred Cce--------eec----ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc-eeeeeecCCCCcEEEEeccCC
Q 019384 91 GKE--------DIL----GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE-RTLVGTYPQPERVYSLSLVGN 157 (342)
Q Consensus 91 ~~~--------~~~----~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~-~~~~~~~~~~~~v~~~s~~~~ 157 (342)
+.. ..+ .+|...|.+++|+|++ +++++.|++|++||+.+..... ...+.. .+...|.++.+.++
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~-~h~~~V~svaFsg~ 237 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN-ASRRKITDLKIVDY 237 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC-CCSSCCCCEEEETT
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc-cccCcEEEEEEECC
Confidence 742 333 6788999999999998 8889999999999987543210 111211 12233444444467
Q ss_pred eEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEE--eeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRC--YPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
.+++++ +++|++||+.+........ .+...+..+++ +|+++.++++..+|. ++ |...
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~~~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~-kl--w~~d--------------- 296 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSISSLKT--GSLENFHIIPLNHEKESTILLMSNKTSY-KV--LLED--------------- 296 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEEEC--SCCSCCCEEEETTCSSCEEEEECSSCEE-EE--EESS---------------
T ss_pred EEEEEe-CCeEEEEECCCCeEEEEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCC-EE--Eeec---------------
Confidence 777776 7999999998753312211 23345677889 999999999998887 55 4431
Q ss_pred cCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCC
Q 019384 236 SEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPH 315 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~ 315 (342)
.++|+|++..+++. |+++++|+...+. +..+.+ ...|++++|||||+.||+++.- -+-.-||.
T Consensus 297 ------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~i-~~~~~~y~ 359 (588)
T 2j04_A 297 ------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYDM-ERVAFKYK 359 (588)
T ss_dssp ------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEEE-ECSSCCCC
T ss_pred ------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEec-cCceeEEe
Confidence 14589999888775 9999999876443 445544 6679999999999999999875 22223444
Q ss_pred CCC
Q 019384 316 EPD 318 (342)
Q Consensus 316 ~~~ 318 (342)
-++
T Consensus 360 i~s 362 (588)
T 2j04_A 360 IAS 362 (588)
T ss_dssp CSS
T ss_pred ecc
Confidence 444
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.9e-29 Score=223.77 Aligned_cols=243 Identities=15% Similarity=0.176 Sum_probs=180.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc--
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK-- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~-- 92 (342)
..|...|++|+|+|++++||||+.||+|+|||+.+++.. ...+|...+.++.+. +..+++++.++.+++|+.....
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~-~~~l~s~~~~~~~~~~~~~~~~~~ 142 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHH 142 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC-CCEEEEEecCCceEeeecCCCcee
Confidence 567889999999999999999999999999999988754 445788888876664 3456799999999999987765
Q ss_pred eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cC-CeE--EEEEcCCe
Q 019384 93 EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VG-NRL--VVATAGRH 167 (342)
Q Consensus 93 ~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~-~~~--~~~s~d~~ 167 (342)
...+.+|...+.++++.++++.|++++.|++|++||++++................+..+.+ .+ +.+ ++++.+++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
T 4ggc_A 143 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 222 (318)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE
T ss_pred EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE
Confidence 34578899999999999999999999999999999998654322111222223334444443 33 333 34566789
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc--cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS--VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYP 245 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s--~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~ 245 (342)
|++||.+....... ......+..+.+.|++..+++++ .++.+ ++||..... ....+.+|.. +
T Consensus 223 i~lwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i--~iwd~~~~~--~~~~l~gH~~---------~ 286 (318)
T 4ggc_A 223 IRIWNVCSGACLSA---VDAHSQVCSILWSPHYKELISGHGFAQNQL--VIWKYPTMA--KVAELKGHTS---------R 286 (318)
T ss_dssp EEEEETTTCCEEEE---EECSSCEEEEEEETTTTEEEEEECTTTCCE--EEEETTTCC--EEEEECCCSS---------C
T ss_pred EEEEeccccccccc---ccceeeeeeeeecccccceEEEEEcCCCEE--EEEECCCCc--EEEEEcCCCC---------C
Confidence 99999987643221 12233467788899988887765 56655 569986543 2334555543 6
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEEeCCCc
Q 019384 246 VNAIAFHPIYGTFATGGCDGFVNVWDGNNK 275 (342)
Q Consensus 246 v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~ 275 (342)
|++|+|+|++++|+|||.||+|+|||+...
T Consensus 287 V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 287 VLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999999999998653
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=9e-30 Score=232.58 Aligned_cols=243 Identities=17% Similarity=0.221 Sum_probs=176.8
Q ss_pred CCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCceeeeeee---cCCceEEEEEeCCCC-eEEEecCCcEEEEEeccC
Q 019384 17 PPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASANVLRGEFM---HGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHG 91 (342)
Q Consensus 17 ~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~~~~~~~---h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~ 91 (342)
.|...|++++|+| ++++|++++.|++|+|||+.+........ |...|.+++|++++. +++++.|+.|++||+...
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 195 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH 195 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC
Confidence 6899999999999 78999999999999999998765554443 447899999997665 568999999999999655
Q ss_pred ceeecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEE--ec-cCCeEEEEEcCCe
Q 019384 92 KEDILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSL--SL-VGNRLVVATAGRH 167 (342)
Q Consensus 92 ~~~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~--s~-~~~~~~~~s~d~~ 167 (342)
....+.+|...|.+++|+|+++ +|++|+.|++|++||+++..... ..+....+...+.++ +. +++.+++++.|+.
T Consensus 196 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 196 EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN-SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT-CEEEEEECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc-ceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence 5667789999999999999998 89999999999999997533211 112212233445544 44 5678999999999
Q ss_pred EEEEeCCCCCCcccccccc---------c------ceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeee
Q 019384 168 VNVYDLRNMSQPEQRRESS---------L------KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKC 232 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~---------~------~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 232 (342)
|++||+++........... + ......++++|+++. +++.++.+ ++||....... ..+..
T Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i--~iwd~~~~~~~--~~l~~ 348 (383)
T 3ei3_B 275 IRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTI--DIYDANSGGLV--HQLRD 348 (383)
T ss_dssp EEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCE--EEEETTTCCEE--EEECB
T ss_pred EEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeE--EEEecCCCcee--eeecC
Confidence 9999998765432211110 0 012334556676665 66677766 56998654322 22222
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
|. +...+.+++|+|++.+|++|+ ||+|+|||+++
T Consensus 349 ~~-------~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PN-------AAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TT-------BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CC-------CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 11 122477789999999999997 99999999874
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=8.9e-30 Score=236.82 Aligned_cols=254 Identities=18% Similarity=0.241 Sum_probs=188.2
Q ss_pred CCCCCCeEEEEEcCC-CCeEEEEeCCCcEEEEECCC-----------ceeeeeeecCCceEEEEEeCCCC--eEEEecCC
Q 019384 16 NPPSDGISNLRFSNH-SDHLLVSSWDKSVRLYDASA-----------NVLRGEFMHGGPVLDCCFHDDSS--GFSASADH 81 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~-~~~l~s~s~Dgti~vwd~~~-----------~~~~~~~~h~~~V~~~~~~~~~~--~~s~s~D~ 81 (342)
..|.+.|++++|+|+ +.+||+++.||+|+|||+.. ........|.+.|.+++|++++. +++++.|+
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 467889999999997 78999999999999999864 22445567999999999997654 67899999
Q ss_pred cEEEEEeccCc--------eeecccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCC-cceeeeeecCCCCcEEE
Q 019384 82 TVRRLVFSHGK--------EDILGKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASG-QERTLVGTYPQPERVYS 151 (342)
Q Consensus 82 ~i~~w~~~~~~--------~~~~~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~-~~~~~~~~~~~~~~v~~ 151 (342)
.|++|++.... ...+.+|...|.+++|+| ++..|++++.|+.|++||+++... .....+.. +...+.+
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~ 282 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA--HTAEVNC 282 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC--CSSCEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec--CCCCeEE
Confidence 99999998732 124568999999999999 667899999999999999986421 11122222 3344555
Q ss_pred Eecc--CC-eEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccc
Q 019384 152 LSLV--GN-RLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKY 228 (342)
Q Consensus 152 ~s~~--~~-~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 228 (342)
++++ +. .+++++.|+.|++||+++...+. .
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~-----------------------------------------------~ 315 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKL-----------------------------------------------H 315 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCS-----------------------------------------------E
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCe-----------------------------------------------E
Confidence 5554 43 57788889999999987632110 0
Q ss_pred eeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCC--------------ceeeeccCCCCcceEEEEE
Q 019384 229 AFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNN--------------KKRLYQYSKYPTSIAALSF 293 (342)
Q Consensus 229 ~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~--------------~~~~~~~~~~~~~V~~v~~ 293 (342)
.+..|. .+|.+++|+|+++ +|++++.|++|+|||+.. ...+..+.+|...|.+++|
T Consensus 316 ~~~~h~---------~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 386 (430)
T 2xyi_A 316 SFESHK---------DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386 (430)
T ss_dssp EEECCS---------SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE
T ss_pred EeecCC---------CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE
Confidence 011111 1588999999986 689999999999999876 2566778899999999999
Q ss_pred CCCCC-EEEEEEeccccCCCCCCCCCcEEEEEccCCccccCCCCCC
Q 019384 294 SRDGR-LLAVASSYTFEEGDKPHEPDAIFVRSVNEIEVKPKPKAYP 338 (342)
Q Consensus 294 spdg~-~las~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
+|++. +|++++.++ .|.+|++.+.-+.+..+..|
T Consensus 387 ~p~~~~~l~s~s~dg-----------~i~iw~~~~~~~~~~~~~~~ 421 (430)
T 2xyi_A 387 NPNEPWIICSVSEDN-----------IMQVWQMAENVYNDEEPEIP 421 (430)
T ss_dssp CSSSTTEEEEEETTS-----------EEEEEEECHHHHCC------
T ss_pred CCCCCCEEEEEECCC-----------CEEEeEcccccccCCCccCC
Confidence 99999 777777655 58899987655554444433
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4e-30 Score=231.92 Aligned_cols=261 Identities=10% Similarity=0.005 Sum_probs=186.0
Q ss_pred EEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEecc---------Cc-ee-
Q 019384 26 RFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSH---------GK-ED- 94 (342)
Q Consensus 26 ~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~---------~~-~~- 94 (342)
.+.+++.+|+||+.||+|+|||+.+++....+. .+.|.++.|++. +++++.|+++++|+... +. ..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 344678899999999999999998877655443 567778888776 88999999999997653 22 11
Q ss_pred ecccCCcceeEEEEeC--CCCEEEEeeCCCcEEEEcCCCCCCcceeee-eecCCCCcEEEEeccCCeEEEEEcCCeEEEE
Q 019384 95 ILGKHDAPVRCIEYSY--AAGQVITGSWDKSLKCWDPRGASGQERTLV-GTYPQPERVYSLSLVGNRLVVATAGRHVNVY 171 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~--~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~-~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iw 171 (342)
...+|...|.+++|+| ++++|++|+.|++|++||++++.. .... .........+.+++++..+++++.|+.|++|
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 2236778999999999 999999999999999999976433 1111 1222234455666677789999999999999
Q ss_pred eCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccce-eeeEEecCCCCceeeee--eE
Q 019384 172 DLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYA-FKCHRKSEAGRDIVYPV--NA 248 (342)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~-~~~h~~~~~~~~~~~~v--~~ 248 (342)
|++++..........+...+.+++|+|++..+++++ ++. +++||++.......+. +..|. .++ .+
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~--v~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~ 265 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQT--VVCFDLRKDVGTLAYPTYTIPE---------FKTGTVT 265 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSB--EEEEETTSSTTCBSSCCCBC--------------CCEE
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCe--EEEEEcCCCCcceeeccccccc---------ccccceE
Confidence 999875541222222446789999999999999998 444 5679997653322211 11111 123 36
Q ss_pred EEEcCCCCeEEEecC-CCeEEEEeCCCceeeeccCCCCcceEEEEECC---CCCEEEEEEecc
Q 019384 249 IAFHPIYGTFATGGC-DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSR---DGRLLAVASSYT 307 (342)
Q Consensus 249 v~~sp~~~~l~sgs~-Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~sp---dg~~las~s~~~ 307 (342)
++|+|++++|++++. |+.|+||+.+........ .++..++|+| +++.|++++.++
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETT
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCC
Confidence 999999999999988 999999998654332222 5677888888 888888888765
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=4.1e-30 Score=239.41 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=172.2
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCceeeeeee---cCCceEEEEEeCCCCe-EEEecCCcEEEEEecc
Q 019384 16 NPPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASANVLRGEFM---HGGPVLDCCFHDDSSG-FSASADHTVRRLVFSH 90 (342)
Q Consensus 16 ~~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~~~~~~~---h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~ 90 (342)
.+|.+.|++|+|+| ++++|+|||.||+|+|||+.++.+..... +...+.+++|++++.+ ++|+.|+.|++||++.
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 47899999999998 78999999999999999998766544433 2345788999877664 6899999999999987
Q ss_pred CceeecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEEEEcCCe
Q 019384 91 GKEDILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATAGRH 167 (342)
Q Consensus 91 ~~~~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~d~~ 167 (342)
.....+.+|...|.+++|+|++. +|++|+.|++|++||+++..... .......+...+.++++ ++..|++++.|++
T Consensus 241 ~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 241 KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-SFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS-CCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc-eEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 66667889999999999999875 67899999999999998654321 11222234445666555 5678999999999
Q ss_pred EEEEeCCCCCCcccccccccc----eeeEEEEEeeCCceEEEEcc-----------CCeEEEEEeechhhhhcccceeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLK----YQTRCVRCYPNGTGYALSSV-----------EGRVAMEFFDLSEASQAKKYAFKC 232 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~s~-----------~~~~~i~~~d~~~~~~~~~~~~~~ 232 (342)
|++||+++.........+... .......++|++..++++.. ++. .|++||......... ....
T Consensus 320 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~i~iwd~~~g~~~~~-l~~~ 397 (435)
T 4e54_B 320 IRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELR-TIDVFDGNSGKMMCQ-LYDP 397 (435)
T ss_dssp EEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCC-CEEEECSSSCCEEEE-ECCS
T ss_pred EEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCC-EEEEEECCCCcEEEE-EeCC
Confidence 999999886543222111100 01122345566555555432 211 346788754322111 0111
Q ss_pred EEecCCCCceeeeeeEE-EEcCCCCeEEEecCCCeEEEEeCCCcee
Q 019384 233 HRKSEAGRDIVYPVNAI-AFHPIYGTFATGGCDGFVNVWDGNNKKR 277 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v-~~sp~~~~l~sgs~Dg~I~iWd~~~~~~ 277 (342)
| ...|.++ +|+|+|.+|++|+ |++|+|||+++++.
T Consensus 398 ~---------~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 398 E---------SSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp S---------CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred C---------CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 2 2247776 6999999999987 88999999988754
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.5e-29 Score=224.78 Aligned_cols=247 Identities=13% Similarity=0.124 Sum_probs=188.1
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe-EEEecC-----CcEEEEEec
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-FSASAD-----HTVRRLVFS 89 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~s~s~D-----~~i~~w~~~ 89 (342)
..|...|++++|+|++++|++++.||+|+|||+.+++....+.|...|.+++|++++.. ++++.+ +.+++|++.
T Consensus 71 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 46889999999999999999999999999999998887777779999999999977765 577777 899999997
Q ss_pred cCce------------eecccCCc--ceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc
Q 019384 90 HGKE------------DILGKHDA--PVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV 155 (342)
Q Consensus 90 ~~~~------------~~~~~h~~--~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~ 155 (342)
.... ..+..|.. .+.+++|+|+++.|++++.|+.|++||+++... ....+..+......+.++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE-YVDSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTE-EEEEEECCSSCEEEEEECTT
T ss_pred CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE-eEEEEecCCCceeEEEECCC
Confidence 7641 12344555 899999999999999999999999999975322 12222222222233344556
Q ss_pred CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeE------------EEEEeechhhh
Q 019384 156 GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRV------------AMEFFDLSEAS 223 (342)
Q Consensus 156 ~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~------------~i~~~d~~~~~ 223 (342)
++.+++++.|+.|++||+++....... .....+.+++++|++..+++++.++.. .+++||.....
T Consensus 230 ~~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 230 LTYFITSSRDTNSFLVDVSTLQVLKKY---ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEE---ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred CCEEEEecCCceEEEEECCCCceeeee---cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 678999999999999999886433221 133457889999999999998877632 45668875432
Q ss_pred hcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCcee
Q 019384 224 QAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKR 277 (342)
Q Consensus 224 ~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~ 277 (342)
. ...+..|. .+|.+++|+|++++|++|+.||+|++|+++++..
T Consensus 307 ~--~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 307 E--IGRVQGHF---------GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp E--EEEEECCS---------SCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred c--hhheeccc---------CcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 2 22233333 3699999999999999999999999999986543
No 97
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=7.6e-30 Score=231.25 Aligned_cols=245 Identities=13% Similarity=0.136 Sum_probs=187.5
Q ss_pred ecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccCc---eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCC
Q 019384 58 MHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGK---EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGAS 133 (342)
Q Consensus 58 ~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~---~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~ 133 (342)
.|.++|.+++|++++.+ ++++.|+.|++|++.+++ ...+.+|...|.+++|+|++++|++++.|++|++||+++..
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 38899999999987765 578899999999998884 45677899999999999999999999999999999986543
Q ss_pred CcceeeeeecCCCCcEEEE--eccCCeEEEEEcCCeEEEEeCCCCCCc--ccccccccceeeEEEEEeeCCceEEEEccC
Q 019384 134 GQERTLVGTYPQPERVYSL--SLVGNRLVVATAGRHVNVYDLRNMSQP--EQRRESSLKYQTRCVRCYPNGTGYALSSVE 209 (342)
Q Consensus 134 ~~~~~~~~~~~~~~~v~~~--s~~~~~~~~~s~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~ 209 (342)
.. .......+...+.++ +.+++.+++++.|+.|++||++..... ...........+.+++++|++..+++++.+
T Consensus 86 ~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 86 WK--PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EE--EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred ee--eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 21 111112233445444 445678999999999999999876431 111112334568899999999999999999
Q ss_pred CeEEEEEeechhhh----------------hcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 210 GRVAMEFFDLSEAS----------------QAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 210 ~~~~i~~~d~~~~~----------------~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
+.+. +||..... ......+.. +..+|.+++|+|++.+|++++.||+|++||.+
T Consensus 164 g~i~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 164 FKCR--IFSAYIKEVEERPAPTPWGSKMPFGELMFESSS---------SCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SCEE--EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC---------CSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred CCEE--EEEcccccccccccccccccccchhhheEecCC---------CCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 9875 58863110 111111222 22369999999999999999999999999999
Q ss_pred CceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 274 NKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 274 ~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
+++.+..+..|...|.+++|+||+++|+++ .++ .|.+|++..
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~-----------~i~i~~~~~ 274 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFITESSLVAAG-HDC-----------FPVLFTYDS 274 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTS-----------SCEEEEEET
T ss_pred CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCC-----------eEEEEEccC
Confidence 998898999999999999999999999877 433 377887765
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=5.4e-29 Score=225.82 Aligned_cols=268 Identities=13% Similarity=0.080 Sum_probs=184.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-e-EEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-G-FSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~-~s~s~D~~i~~w~~~~~~~ 93 (342)
+.|.+.|++++|+|||++||+|+.|+ ++|||+..........+ ..+..+.+.++.. + ++++.|++|++||..+++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 78899999999999999999988775 78999987655443333 3577777765443 3 4678889999999988875
Q ss_pred eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEE--EEcCCeEEEE
Q 019384 94 DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVV--ATAGRHVNVY 171 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~--~s~d~~v~iw 171 (342)
.....|...|.+++++++ .++.+ .|+.|++||+++..... ..+.. +..+.+++. +.+++ ++.++.|++|
T Consensus 94 ~~~~~~~~~v~~v~~~~~--~~~~~-~~~~i~i~d~~~~~~~~-~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 94 VSRIKVDAPVKDLFLSRE--FIVVS-YGDVISVFKFGNPWKRI-TDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEEEECSSCEEEEEECSS--EEEEE-ETTEEEEEESSTTCCBS-SCCEE---EEEEEEEET--TEEEEEESSCTTCEEEE
T ss_pred EEEEECCCceEEEEEcCC--EEEEE-EcCEEEEEECCCCceee-EEecc---CCceEEEEc--cEEEEeCCCcCcEEEEE
Confidence 443447779999999874 34443 48899999997641111 11111 233444544 66666 4788999999
Q ss_pred eCCCCCC--------------cccccccccceeeEEEEEeeCCceEEEEccCCe-EEEEEeechhhhhcccceee-e-EE
Q 019384 172 DLRNMSQ--------------PEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR-VAMEFFDLSEASQAKKYAFK-C-HR 234 (342)
Q Consensus 172 d~~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~-~~i~~~d~~~~~~~~~~~~~-~-h~ 234 (342)
|+++... +.......+...+.+++++|++..+++++.|++ ++ +||....... ..+. + |.
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~--iwd~~~~~~~--~~~~~g~h~ 240 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR--VFKTEDGVLV--REFRRGLDR 240 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEE--EEETTTCCEE--EEEECTTCC
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEE--EEECCCCcEE--EEEEcCCCC
Confidence 9987531 001112234556899999999999999999997 64 5998654322 2232 1 32
Q ss_pred ecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCcee--eeccC---------------------CCCcceEEE
Q 019384 235 KSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKR--LYQYS---------------------KYPTSIAAL 291 (342)
Q Consensus 235 ~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~--~~~~~---------------------~~~~~V~~v 291 (342)
.+|.+++|+|++++|++|+.|++|+|||++.... ...+. ........+
T Consensus 241 ---------~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (355)
T 3vu4_A 241 ---------ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKI 311 (355)
T ss_dssp ---------SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEE
T ss_pred ---------CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEE
Confidence 3699999999999999999999999999875421 11111 112234679
Q ss_pred EECCCCCEEEEEEecc
Q 019384 292 SFSRDGRLLAVASSYT 307 (342)
Q Consensus 292 ~~spdg~~las~s~~~ 307 (342)
+|+|||++|++++.++
T Consensus 312 a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 312 AWISESSLVVVWPHTR 327 (355)
T ss_dssp EESSSSEEEEEETTTT
T ss_pred EEeCCCCEEEEEeCCC
Confidence 9999999999998644
No 99
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.4e-28 Score=220.25 Aligned_cols=249 Identities=18% Similarity=0.204 Sum_probs=179.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCC-CCeEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDD-SSGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~-~~~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+|...|.+++|+|++++|++++.|+.|++|+........ ...+...+..+.+.+. ..+++++.|+.+++|+......
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 162 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce
Confidence 5789999999999999999999999999999998765443 3456777888888754 4567999999999999876653
Q ss_pred --eecccCCcceeEEEEeCCC--CEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEE--EeccCCeEEEEEcCCe
Q 019384 94 --DILGKHDAPVRCIEYSYAA--GQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYS--LSLVGNRLVVATAGRH 167 (342)
Q Consensus 94 --~~~~~h~~~V~~~~~~~~~--~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~~~~~s~d~~ 167 (342)
..+.+|...|.+++|++++ ..+++++.|++|++||+++... ...+.. +...+.+ ++++++.+++++.|++
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--~~~~~~--h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--KTNHIG--HTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--EEEECC--CSSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--eeEecC--CCCcEEEEEECCCCCEEEEEeCCCe
Confidence 3457899999999999865 4678999999999999875432 122222 3344544 4556678999999999
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
|++||+++...... . .....+.++.++|++. +++++.++.+ ++||....... ..+..+........+...|+
T Consensus 239 i~iwd~~~~~~~~~-~--~~~~~v~~~~~~~~~~-~~~~~~d~~i--~iwd~~~~~~~--~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 239 AMLWDLNEGKHLYT-L--DGGDIINALCFSPNRY-WLCAATGPSI--KIWDLEGKIIV--DELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp EEEEETTTTEEEEE-E--ECSSCEEEEEECSSSS-EEEEEETTEE--EEEETTTTEEE--EEECCC-------CCCCCEE
T ss_pred EEEEEeccCceeee-e--cCCceEEeeecCCCCc-eeeccCCCEE--EEEECCCCeEE--EeccccceeeeccCCCCCEE
Confidence 99999987643221 1 1223567888888876 4556667765 56887543221 11111111111122334799
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCce
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~ 276 (342)
+++|+|++++|++|+.||+|+|||+++|+
T Consensus 311 ~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999999999998875
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.6e-29 Score=226.26 Aligned_cols=245 Identities=15% Similarity=0.129 Sum_probs=179.5
Q ss_pred CCCCCeEEEEEcCC---CCeEEEEeCCCcEEEEECCCce--eeeeeecCCceEEEEE------eCCC-CeEEEecCCcEE
Q 019384 17 PPSDGISNLRFSNH---SDHLLVSSWDKSVRLYDASANV--LRGEFMHGGPVLDCCF------HDDS-SGFSASADHTVR 84 (342)
Q Consensus 17 ~~~~~V~~l~fs~~---~~~l~s~s~Dgti~vwd~~~~~--~~~~~~h~~~V~~~~~------~~~~-~~~s~s~D~~i~ 84 (342)
.|...|++++|+|+ +++|++++.||+|++||+.++. ......|.+.|.++.| ++++ .+++++.|+.++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 67889999999998 6999999999999999998765 4445579999999966 4444 467999999999
Q ss_pred EEEeccCc--eeecccCC----cceeEEE----EeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec
Q 019384 85 RLVFSHGK--EDILGKHD----APVRCIE----YSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL 154 (342)
Q Consensus 85 ~w~~~~~~--~~~~~~h~----~~V~~~~----~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~ 154 (342)
+|++.++. ...+..|. ..|.+++ |+|++..|++++.|+.|++||+++... ..... +...+.++.+
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~--~~~~v~~~~~ 217 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETN--IKNGVCSLEF 217 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEE--CSSCEEEEEE
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecC--CCCceEEEEc
Confidence 99998865 23344333 4799998 678999999999999999999976432 11222 2334555544
Q ss_pred -----cCCeEEEEEcCCeEEEEeCCCCCCccccc---ccccceeeEEEEEeeCCc-eEEEEccCCeEEEEEeechhhhhc
Q 019384 155 -----VGNRLVVATAGRHVNVYDLRNMSQPEQRR---ESSLKYQTRCVRCYPNGT-GYALSSVEGRVAMEFFDLSEASQA 225 (342)
Q Consensus 155 -----~~~~~~~~s~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~-~~~~~s~~~~~~i~~~d~~~~~~~ 225 (342)
+++.+++++.|+.|++||+++........ .......+.+++++|++. .+++++.|+.+. +||+......
T Consensus 218 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~ 295 (357)
T 3i2n_A 218 DRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLH--LWKYEYPIQR 295 (357)
T ss_dssp SCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE--EEEEECCSCC
T ss_pred CCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEE--EeecCCCccc
Confidence 45789999999999999998753321111 013345688999999988 788999999765 5887543221
Q ss_pred c-----------------cceeeeEEecCCCCceeeeeeEEEEcCCCCeEE-EecCCCeEEEEeCCCcee
Q 019384 226 K-----------------KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFA-TGGCDGFVNVWDGNNKKR 277 (342)
Q Consensus 226 ~-----------------~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~-sgs~Dg~I~iWd~~~~~~ 277 (342)
. ...+..| ..+|.+++|+|++++|+ +|+.||.|+|||+.+.+.
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLS---------TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECC---------SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccCCCCccccccccceeeccccC---------CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 1 1112222 23699999999999998 899999999999987543
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.3e-28 Score=244.10 Aligned_cols=274 Identities=16% Similarity=0.180 Sum_probs=204.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK- 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~- 92 (342)
..|...|++++|+|++++|++++.||+|+|||+.+++... ...|.+.|.+++|++++. +++++.|+.+++|++.++.
T Consensus 52 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (814)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE
T ss_pred ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce
Confidence 3688999999999999999999999999999998876544 456999999999997775 5789999999999998864
Q ss_pred -eeecccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEEEEcCCeE
Q 019384 93 -EDILGKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATAGRHV 168 (342)
Q Consensus 93 -~~~~~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~d~~v 168 (342)
...+.+|...|.+++|+| ++..|++++.|++|++||+++.... ...............+++ ++..+++++.|+.|
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 210 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS-EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce-eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence 346778999999999999 7889999999999999998754432 111122223344556666 66789999999999
Q ss_pred EEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE
Q 019384 169 NVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA 248 (342)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~ 248 (342)
++||+++....... ......+.+++++|++..+++++.++.+. +||...... ...+..|. .++.+
T Consensus 211 ~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~v~--vwd~~~~~~--~~~~~~~~---------~~v~~ 275 (814)
T 3mkq_A 211 KIWDYQTKSCVATL--EGHMSNVSFAVFHPTLPIIISGSEDGTLK--IWNSSTYKV--EKTLNVGL---------ERSWC 275 (814)
T ss_dssp EEEETTTTEEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEE--EEETTTCSE--EEEECCSS---------SSEEE
T ss_pred EEEECCCCcEEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCeEE--EEECCCCcE--EEEeecCC---------CcEEE
Confidence 99999876432211 12334678999999999999999999865 588854322 12222221 26899
Q ss_pred EEEcCCCCe-EEEecCCCeEEEEeCCCc----------eeee---------------------------------ccCCC
Q 019384 249 IAFHPIYGT-FATGGCDGFVNVWDGNNK----------KRLY---------------------------------QYSKY 284 (342)
Q Consensus 249 v~~sp~~~~-l~sgs~Dg~I~iWd~~~~----------~~~~---------------------------------~~~~~ 284 (342)
++|+|++.. +++++.|+.+.+|+.... +.+. .+..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (814)
T 3mkq_A 276 IATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSV 355 (814)
T ss_dssp EEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCC
T ss_pred EEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCC
Confidence 999999873 244445677888886432 1111 11234
Q ss_pred CcceEEEEECCCCCEEEEEEe
Q 019384 285 PTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 285 ~~~V~~v~~spdg~~las~s~ 305 (342)
...+.+++|+|||++|++++.
T Consensus 356 ~~~~~~~~~spdg~~la~~~~ 376 (814)
T 3mkq_A 356 DVFPQSLAHSPNGRFVTVVGD 376 (814)
T ss_dssp SSCCSEEEECTTSSEEEEEET
T ss_pred ccCCceeEECCCCCEEEEecC
Confidence 456899999999999999874
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-28 Score=229.17 Aligned_cols=275 Identities=10% Similarity=0.013 Sum_probs=194.9
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce---eeeee---------------------------------------
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANV---LRGEF--------------------------------------- 57 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~---~~~~~--------------------------------------- 57 (342)
..|.+++|+++|++|+++ .++.|++||+.+++ .+...
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 357899999999966554 68899999987765 33222
Q ss_pred ----------------ecCCceEEEEEeCCCCe--EEEecCCcEEEEEec--cCce-eecc--cCCcceeEEEEeCCCCE
Q 019384 58 ----------------MHGGPVLDCCFHDDSSG--FSASADHTVRRLVFS--HGKE-DILG--KHDAPVRCIEYSYAAGQ 114 (342)
Q Consensus 58 ----------------~h~~~V~~~~~~~~~~~--~s~s~D~~i~~w~~~--~~~~-~~~~--~h~~~V~~~~~~~~~~~ 114 (342)
.|.+.|.+++|++++.. ++++.|+.|++|++. ++.. ..+. .|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 23346999999987765 578899999999998 6553 3343 57789999999999999
Q ss_pred EEEeeCCCcEEEEcCCCCCCcc--eeeeeecCCCCcEEEEecc---CCeEEEEEcCCeEEEEeCCCCCCcccccccccce
Q 019384 115 VITGSWDKSLKCWDPRGASGQE--RTLVGTYPQPERVYSLSLV---GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKY 189 (342)
Q Consensus 115 l~sgs~D~~I~iWd~~~~~~~~--~~~~~~~~~~~~v~~~s~~---~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 189 (342)
|++|+.|+.|++||+.+..... ...+..+......+.++.+ +..+++++.|++|++||+++...... .......
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~h~~ 242 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK-WLFGHKH 242 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE-ECCCCSS
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee-eecCCCC
Confidence 9999999999999987543321 1122333333333445555 55899999999999999987643322 1223345
Q ss_pred eeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEec----------------CCCCceeeeeeEEEEcC
Q 019384 190 QTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKS----------------EAGRDIVYPVNAIAFHP 253 (342)
Q Consensus 190 ~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~----------------~~~~~~~~~v~~v~~sp 253 (342)
.+.+++++ ++..+++++.|+.+ ++||+........ +..+... .........|.+++|+|
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v--~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKI--FAWDWKTGKNLST--FDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEE--EEEETTTCCEEEE--EECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred ceEEEEEC-CCCEEEEEeCCCeE--EEEECCCCcEeee--ecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 67899999 99999999999976 4599865432222 1111000 00001123588999999
Q ss_pred CCCeEEEec-CCCeEEEEeC--CCc---eeeeccCCCCcceEEEEECCCCCEEEE
Q 019384 254 IYGTFATGG-CDGFVNVWDG--NNK---KRLYQYSKYPTSIAALSFSRDGRLLAV 302 (342)
Q Consensus 254 ~~~~l~sgs-~Dg~I~iWd~--~~~---~~~~~~~~~~~~V~~v~~spdg~~las 302 (342)
++++|++++ .|+.|+||++ .++ +.+..+..| ..|.+++|+|++.++++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTL 371 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEE
Confidence 999999988 8999999999 554 566777777 88999999996544433
No 103
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=8e-29 Score=226.82 Aligned_cols=249 Identities=14% Similarity=0.120 Sum_probs=187.2
Q ss_pred eeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc-------eeecccCCcceeEEEEeCC----C---CEEEEeeCC
Q 019384 56 EFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK-------EDILGKHDAPVRCIEYSYA----A---GQVITGSWD 121 (342)
Q Consensus 56 ~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~-------~~~~~~h~~~V~~~~~~~~----~---~~l~sgs~D 121 (342)
..+|.+.|++++|++ ..+++++.|+.|++|++.+.. ...+.+|...|.+++|+|+ + .+|++++.|
T Consensus 12 ~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 12 GKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp SSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence 347999999999988 677899999999999998876 4567789999999999999 8 899999999
Q ss_pred CcEEEEcCCCCCCcc---eeeeeecCC---CCcEEE--Ee----ccCCe-EEEEEcCCeEEEEeCCC------CCCcc--
Q 019384 122 KSLKCWDPRGASGQE---RTLVGTYPQ---PERVYS--LS----LVGNR-LVVATAGRHVNVYDLRN------MSQPE-- 180 (342)
Q Consensus 122 ~~I~iWd~~~~~~~~---~~~~~~~~~---~~~v~~--~s----~~~~~-~~~~s~d~~v~iwd~~~------~~~~~-- 180 (342)
+.|++||+++..... ...+..+.. ...+.+ ++ .+++. +++++.|+.|++||+++ .....
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 170 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS 170 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeecc
Confidence 999999987543211 112222210 144544 44 44668 99999999999999987 33221
Q ss_pred ---cccc-----cccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeee---EEecCCCCceeeeeeEE
Q 019384 181 ---QRRE-----SSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKC---HRKSEAGRDIVYPVNAI 249 (342)
Q Consensus 181 ---~~~~-----~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~---h~~~~~~~~~~~~v~~v 249 (342)
.... ......+.+++++|++ .+++++.++.+ ++||.+.... ...+.. |... ..+|.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i--~i~d~~~~~~--~~~~~~~~~h~~~------~~~i~~i 239 (397)
T 1sq9_A 171 PTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV--QISELSTLRP--LYNFESQHSMINN------SNSIRSV 239 (397)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE--EEEETTTTEE--EEEEECCC---CC------CCCEEEE
T ss_pred CcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE--EEEECCCCce--eEEEecccccccc------CCccceE
Confidence 1100 1224457889999999 99999999976 4599865322 223333 3100 2369999
Q ss_pred EEcCCCCeEEEecCC---CeEEEEeCCCceeeeccCC-------------CCcceEEEEECCCCCEEEEEEeccccCCCC
Q 019384 250 AFHPIYGTFATGGCD---GFVNVWDGNNKKRLYQYSK-------------YPTSIAALSFSRDGRLLAVASSYTFEEGDK 313 (342)
Q Consensus 250 ~~sp~~~~l~sgs~D---g~I~iWd~~~~~~~~~~~~-------------~~~~V~~v~~spdg~~las~s~~~~~~~~~ 313 (342)
+|+|++.+|++++.| |.|++||+++++.+..+.+ |...|.+++|+||+++|++++.+.
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------ 313 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG------ 313 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS------
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC------
Confidence 999999999999999 9999999999988888888 999999999999999999998654
Q ss_pred CCCCCcEEEEEccC
Q 019384 314 PHEPDAIFVRSVNE 327 (342)
Q Consensus 314 ~~~~~~~~~~~~~~ 327 (342)
.|.+|++..
T Consensus 314 -----~i~iwd~~~ 322 (397)
T 1sq9_A 314 -----KLRFWDVKT 322 (397)
T ss_dssp -----EEEEEETTT
T ss_pred -----eEEEEEcCC
Confidence 466666643
No 104
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=5e-29 Score=226.92 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=148.6
Q ss_pred CCCCCCeEEEEEcCCCCeEEE--EeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLV--SSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s--~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~ 93 (342)
..+.+.+.+++|||||++||+ ++.|++|||||+.+++.+..+.|.+.|.+++|+|+++++..+.++.+++|+..++..
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSC 209 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCE
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcc
Confidence 345667999999999999865 457999999999998888888899999999999998887666677788888777663
Q ss_pred ---eecccCCcceeEEEEeCCCCEEEEeeCCC----cEEEEcCCCCCCcceeeeeecCCCCcEE--EEeccCCeEEEEEc
Q 019384 94 ---DILGKHDAPVRCIEYSYAAGQVITGSWDK----SLKCWDPRGASGQERTLVGTYPQPERVY--SLSLVGNRLVVATA 164 (342)
Q Consensus 94 ---~~~~~h~~~V~~~~~~~~~~~l~sgs~D~----~I~iWd~~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~~~~~s~ 164 (342)
.....|...|.+++|+|+++.+++++.|+ ++++||+...............+...+. +++++++.|++++.
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 24567999999999999999999999887 6888887543211111111112223333 34445567777777
Q ss_pred CCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceee
Q 019384 165 GRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVY 244 (342)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~ 244 (342)
|++|+|||+++++. .. ..+.+|. .
T Consensus 290 D~~V~iwd~~~~~~----------------------------------------------~~-~~~~gH~---------~ 313 (365)
T 4h5i_A 290 DNSIALVKLKDLSM----------------------------------------------SK-IFKQAHS---------F 313 (365)
T ss_dssp TSCEEEEETTTTEE----------------------------------------------EE-EETTSSS---------S
T ss_pred CCEEEEEECCCCcE----------------------------------------------EE-EecCccc---------C
Confidence 77777777765310 00 0012232 2
Q ss_pred eeeEEEEcCCCCeEEEecCCCeEEEEeCCC
Q 019384 245 PVNAIAFHPIYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
+|++|+|+|||++|||||.|++|||||+..
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 699999999999999999999999999853
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=9.4e-29 Score=227.57 Aligned_cols=248 Identities=13% Similarity=0.128 Sum_probs=185.0
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCce--------eeeeeecCCceEEEEEeCCC--CeEEEecCCcEE
Q 019384 16 NPPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASANV--------LRGEFMHGGPVLDCCFHDDS--SGFSASADHTVR 84 (342)
Q Consensus 16 ~~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~--------~~~~~~h~~~V~~~~~~~~~--~~~s~s~D~~i~ 84 (342)
..|.+.|++++|+| ++++|++|+.||+|+|||+.++. +....+|.+.|.+++|++++ .+++++.|+.|+
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 57899999999999 99999999999999999997752 34455799999999999775 467999999999
Q ss_pred EEEeccCce-eec--ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeee-eecCCC-CcEEEEeccCCeE
Q 019384 85 RLVFSHGKE-DIL--GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLV-GTYPQP-ERVYSLSLVGNRL 159 (342)
Q Consensus 85 ~w~~~~~~~-~~~--~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~-~~~~~~-~~v~~~s~~~~~~ 159 (342)
+||+.+++. ..+ ..|...|.+++|+|++++|++++.|++|++||+++... ...+ ..+... .....++.++..+
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV--VAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE--EEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce--eeeeccCCCCCcceEEEEcCCCcEE
Confidence 999998774 345 68999999999999999999999999999999986432 1122 222221 2334555566677
Q ss_pred EEE---EcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEE-EccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 160 VVA---TAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYAL-SSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 160 ~~~---s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
+++ +.|+.|++||+++...+...........+.+++++|++..+++ ++.|+.+. +||...... ....+..|..
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~--i~d~~~~~~-~~~~l~~~~~ 312 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR--YFEITSEAP-FLHYLSMFSS 312 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE--EEEECSSTT-CEEEEEEECC
T ss_pred EEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE--EEEecCCCc-ceEeeccccc
Confidence 777 6889999999988654332222233345788899999998864 55688764 588864431 1222333321
Q ss_pred cCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCcee
Q 019384 236 SEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKR 277 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~ 277 (342)
..+|.+++|+|++.++++ .|+.+++|++.++..
T Consensus 313 -------~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 313 -------KESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp -------SSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred -------CCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 136999999999988765 466999999887543
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.4e-27 Score=218.62 Aligned_cols=254 Identities=16% Similarity=0.190 Sum_probs=181.1
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCC----CeEEEecCCcEEEEEecc
Q 019384 16 NPPSDGISNLRFSN-HSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDS----SGFSASADHTVRRLVFSH 90 (342)
Q Consensus 16 ~~~~~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~----~~~s~s~D~~i~~w~~~~ 90 (342)
..|...|++++|+| ++++|++++.||+|++||+.++.......+...+.++.|.+.. .+++++.|+.+++|++.+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 45899999999999 7889999999999999999998888888899999999997533 357899999999999988
Q ss_pred Cc-eeecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcCCCCCCcceeee------------eecCCCCcEEEEec--
Q 019384 91 GK-EDILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDPRGASGQERTLV------------GTYPQPERVYSLSL-- 154 (342)
Q Consensus 91 ~~-~~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~~~~~~~~~~~~------------~~~~~~~~v~~~s~-- 154 (342)
+. ...+..|...|.+++|+|++. .|++|+.|+.|++||+++......... ....+...+.++.+
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 76 446778999999999999988 589999999999999976432111100 00123334555544
Q ss_pred cCCeEEEEEcCCeEEEEeCCCCCCccccccccc---ceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceee
Q 019384 155 VGNRLVVATAGRHVNVYDLRNMSQPEQRRESSL---KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFK 231 (342)
Q Consensus 155 ~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 231 (342)
+++.+++++.|+.|++||+++............ ............+..+++++.++.+ ++||...... ...+.
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~v~d~~~~~~--~~~~~ 331 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI--AVYTVYSGEQ--ITMLK 331 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE--EEEETTTCCE--EEEEC
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE--EEEECcCCcc--eeeec
Confidence 566899999999999999988654221111100 0011111222334556677777765 5699864322 22334
Q ss_pred eEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC
Q 019384 232 CHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS 282 (342)
Q Consensus 232 ~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~ 282 (342)
+|. .+|.+++|+|++++|++|+.||.|++||+++++.+....
T Consensus 332 ~~~---------~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 332 GHY---------KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CCS---------SCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred cCC---------CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 443 369999999999999999999999999999887665443
No 107
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=2.6e-28 Score=215.74 Aligned_cols=208 Identities=17% Similarity=0.264 Sum_probs=155.1
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc----CCeEEEEEcCCeEEE
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV----GNRLVVATAGRHVNV 170 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~----~~~~~~~s~d~~v~i 170 (342)
.+.+|...|++++|+|++++|+||+.|++|++||+..........+.. +...|.++.+. ++.+++++.|++|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g--H~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc--ccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 457899999999999999999999999999999986432222222333 44556666553 578999999999999
Q ss_pred EeCCCCCCcccccccccceeeEEEEEeeC--CceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE
Q 019384 171 YDLRNMSQPEQRRESSLKYQTRCVRCYPN--GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA 248 (342)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~ 248 (342)
||++++..............+.+++++|+ +..+++++.|+.+. +||.+.........+..|. ..|.+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~--~wd~~~~~~~~~~~~~~h~---------~~v~~ 150 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS--VVEFKENGTTSPIIIDAHA---------IGVNS 150 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE--EEEBCSSSCBCCEEEECCS---------SCEEE
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE--EEEecCCCceeeeeeeccc---------Cccce
Confidence 99987532111111223446889999997 78899999999875 5887643222223334443 26999
Q ss_pred EEEcCC-------------CCeEEEecCCCeEEEEeCCCce----eeeccCCCCcceEEEEECCCC---CEEEEEEeccc
Q 019384 249 IAFHPI-------------YGTFATGGCDGFVNVWDGNNKK----RLYQYSKYPTSIAALSFSRDG---RLLAVASSYTF 308 (342)
Q Consensus 249 v~~sp~-------------~~~l~sgs~Dg~I~iWd~~~~~----~~~~~~~~~~~V~~v~~spdg---~~las~s~~~~ 308 (342)
++|+|+ +++|++|+.|++|+|||.++++ ....+.+|...|.+++|+|++ ++||+++.+.
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~- 229 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR- 229 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-
Confidence 999997 4689999999999999987654 556788999999999999995 8999998765
Q ss_pred cCCCCCCCCCcEEEEEcc
Q 019384 309 EEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~ 326 (342)
.|.+|+++
T Consensus 230 ----------~v~iWd~~ 237 (297)
T 2pm7_B 230 ----------TCIIWTQD 237 (297)
T ss_dssp ----------CEEEEEES
T ss_pred ----------cEEEEEeC
Confidence 46677664
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=3.3e-28 Score=218.10 Aligned_cols=231 Identities=15% Similarity=0.141 Sum_probs=175.7
Q ss_pred ecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc----eeecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcC-C
Q 019384 58 MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK----EDILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDP-R 130 (342)
Q Consensus 58 ~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~----~~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~-~ 130 (342)
.|.+.|.+++|++++. +++++.|+.|++|++.... ...+.+|...|.+++|+|+++ .|++|+.|+.|++||+ +
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 6999999999997665 5789999999999998877 455678999999999999999 9999999999999998 6
Q ss_pred CCCCcceeeeeecCCCCcEEEEecc-CCeEEEEEcCCeEEEEeCCC---------CCCcccccccccceeeEEEEEeeCC
Q 019384 131 GASGQERTLVGTYPQPERVYSLSLV-GNRLVVATAGRHVNVYDLRN---------MSQPEQRRESSLKYQTRCVRCYPNG 200 (342)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~v~~~s~~-~~~~~~~s~d~~v~iwd~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~ 200 (342)
+... ..+....+...+.++.+. ++.+++++.|+.|++||+++ .+.. ... .....+.+++++|++
T Consensus 89 ~~~~---~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~--~~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 89 SPSF---QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS-NNT--KVKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSE---EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCS-SSS--SSCCCEEEEEECSSE
T ss_pred CCce---EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCee-eEE--eeCCceEEEEecCCc
Confidence 5422 222220033445444443 78999999999999999876 3221 111 244567889998876
Q ss_pred ceEEEEccCCeEEEEEeechh-hhhcccceeeeEEecCCCCceeeeeeEEEEcC-CCCeEEEecCCCeEEEEeCCCc---
Q 019384 201 TGYALSSVEGRVAMEFFDLSE-ASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP-IYGTFATGGCDGFVNVWDGNNK--- 275 (342)
Q Consensus 201 ~~~~~~s~~~~~~i~~~d~~~-~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp-~~~~l~sgs~Dg~I~iWd~~~~--- 275 (342)
+++++.++.+ ++||.+. ........... +..+|.+++|+| ++.+|++|+.||.|++|+.+..
T Consensus 163 --l~~~~~d~~i--~i~d~~~~~~~~~~~~~~~---------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 229 (342)
T 1yfq_A 163 --LIVGMNNSQV--QWFRLPLCEDDNGTIEESG---------LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD 229 (342)
T ss_dssp --EEEEESTTEE--EEEESSCCTTCCCEEEECS---------CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS
T ss_pred --EEEEeCCCeE--EEEECCccccccceeeecC---------CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcc
Confidence 8888888876 4599864 22211111111 123689999999 9999999999999999998876
Q ss_pred ---eeeeccCCCCc---------ceEEEEECCCCCEEEEEEecc
Q 019384 276 ---KRLYQYSKYPT---------SIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 276 ---~~~~~~~~~~~---------~V~~v~~spdg~~las~s~~~ 307 (342)
+....+..|.. .|.+++|+||+++|++++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 273 (342)
T 1yfq_A 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG 273 (342)
T ss_dssp TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS
T ss_pred cccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc
Confidence 56666777755 999999999999999998754
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-27 Score=210.08 Aligned_cols=233 Identities=15% Similarity=0.099 Sum_probs=179.5
Q ss_pred eeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc-eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCC
Q 019384 54 RGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK-EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGA 132 (342)
Q Consensus 54 ~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~ 132 (342)
....+|.+.|.+++|.++..+++++.|+.|++|++.+.. ...+..|...|.+++|+|+++.|++++.|+.|++|++...
T Consensus 12 ~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 12 ATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp EEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred HHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence 345579999999999656667899999999999998776 3456789999999999999999999999999999998754
Q ss_pred CCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEee-CCceEEEEccCCe
Q 019384 133 SGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYP-NGTGYALSSVEGR 211 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~s~~~~ 211 (342)
.... .......+...+.+++++++.+++++.|+.|++||... .... .......+.++.++| ++..+++++.++.
T Consensus 92 ~~~~-~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~---~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 166 (313)
T 3odt_A 92 SGED-PLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGS---LVYN-LQAHNASVWDAKVVSFSENKFLTASADKT 166 (313)
T ss_dssp TTSC-C-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTE---EEEE-EECCSSCEEEEEEEETTTTEEEEEETTSC
T ss_pred CCCC-cccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCc---EEEe-cccCCCceeEEEEccCCCCEEEEEECCCC
Confidence 3211 11112234566778888889999999999999999321 1111 112334577888888 8899999999998
Q ss_pred EEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEE
Q 019384 212 VAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAAL 291 (342)
Q Consensus 212 ~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v 291 (342)
+. +||.... ...+.. .+...|.+++|+|++. |++|+.||.|++||.++++.+..+.+|...|.++
T Consensus 167 i~--i~d~~~~----~~~~~~--------~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~ 231 (313)
T 3odt_A 167 IK--LWQNDKV----IKTFSG--------IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI 231 (313)
T ss_dssp EE--EEETTEE----EEEECS--------SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EE--EEecCce----EEEEec--------cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE
Confidence 75 5884221 111111 1223689999999988 9999999999999999999999999999999999
Q ss_pred EECCCCCEEEEEEecc
Q 019384 292 SFSRDGRLLAVASSYT 307 (342)
Q Consensus 292 ~~spdg~~las~s~~~ 307 (342)
+|+|++ .|++++.+.
T Consensus 232 ~~~~~~-~l~~~~~dg 246 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDR 246 (313)
T ss_dssp EECTTS-CEEEEETTS
T ss_pred EEecCC-CEEEEecCC
Confidence 999999 477777644
No 110
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.8e-28 Score=221.73 Aligned_cols=243 Identities=13% Similarity=0.187 Sum_probs=186.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee-ecCCc---------------eEEEEEeCCCCeEEEec
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF-MHGGP---------------VLDCCFHDDSSGFSASA 79 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~-~h~~~---------------V~~~~~~~~~~~~s~s~ 79 (342)
..|...|++++|+|++++|++++.|++|++||+.++.....+ .+... +.+++|++++.+++++.
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (425)
T 1r5m_A 146 NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP 225 (425)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG
T ss_pred cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC
Confidence 468899999999999999999999999999999887655443 34444 89999998888999999
Q ss_pred CCcEEEEEeccCce-eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCC-
Q 019384 80 DHTVRRLVFSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGN- 157 (342)
Q Consensus 80 D~~i~~w~~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~- 157 (342)
|+.+++|++.++.. ..+..|...|.+++|+|+++.|++++.|+.|++||+++.... ..+.. +...+.++.+.++
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~--~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ--NCFYG--HSQSIVSASWVGDD 301 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCS--EEECC--CSSCEEEEEEETTT
T ss_pred CCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccc--eEecC--CCccEEEEEECCCC
Confidence 99999999988763 456789999999999999999999999999999998754321 22222 3344555555433
Q ss_pred eEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc------------
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA------------ 225 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~------------ 225 (342)
.+++++.|+.|++||+++....... ......+.+++++|+++.+++++.++.+. +||+......
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~--i~~~~~~~~~~~~~~~~~~~~~ 377 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALS--IVDGVPIFAGRISQDGQKYAVAFMDGQVN--VYDLKKLNSKSRSLYGNRDGIL 377 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEE--ECTTCCEEEEEECTTSSEEEEEETTSCEE--EEECHHHHC-------------
T ss_pred EEEEEeCCCcEEEEECCCCcEeEec--ccCCccEEEEEEcCCCCEEEEEECCCeEE--EEECCCCccceeeeeccccccc
Confidence 8999999999999999876432211 12334678999999999999999999765 5888654311
Q ss_pred ------ccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC
Q 019384 226 ------KKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 226 ------~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~ 273 (342)
....+..|.. ..+|.+++|+|++++|++|+.||.|++||++
T Consensus 378 ~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 378 NPLPIPLYASYQSSQD-------NDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -CEECCEEEEECCTTC-------CCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CcccchhhhhhcCccc-------CCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 1111222210 0069999999999999999999999999975
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.3e-27 Score=222.26 Aligned_cols=252 Identities=15% Similarity=0.236 Sum_probs=179.9
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee-eeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce-
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG-EFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE- 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~-~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~- 93 (342)
..|...|.+++| ++++|++|+.||+|+|||+.+++... ...|.+.|.++.|++ +.+++++.|+.|++|++.++..
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCC
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCc
Confidence 478899999999 78899999999999999998876544 457999999999964 4778999999999999987763
Q ss_pred ---eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEE
Q 019384 94 ---DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNV 170 (342)
Q Consensus 94 ---~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~i 170 (342)
..+.+|...|.+++| +++.|++|+.|++|++||+++... ...+. .+...+.++.++++.+++++.|+.|++
T Consensus 247 ~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~l~~g~~dg~i~i 320 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--VRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRL 320 (435)
T ss_dssp EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE--EEEEE--CCSSCEEEEEEETTEEEEEETTSCEEE
T ss_pred eeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE--EEEEc--CCCCcEEEEEeCCCEEEEEeCCCeEEE
Confidence 456789999999999 578999999999999999976432 12222 244567788888899999999999999
Q ss_pred EeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc-------ccceeeeEEecCCCCcee
Q 019384 171 YDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA-------KKYAFKCHRKSEAGRDIV 243 (342)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~-------~~~~~~~h~~~~~~~~~~ 243 (342)
||++++...... ......+.++++ ++..+++++.|+.+. +||....... ....+..| .
T Consensus 321 wd~~~~~~~~~~--~~h~~~v~~~~~--~~~~l~sg~~dg~i~--vwd~~~~~~~~~~~~~~~~~~~~~h---------~ 385 (435)
T 1p22_A 321 WDIECGACLRVL--EGHEELVRCIRF--DNKRIVSGAYDGKIK--VWDLVAALDPRAPAGTLCLRTLVEH---------S 385 (435)
T ss_dssp EETTTCCEEEEE--CCCSSCEEEEEC--CSSEEEEEETTSCEE--EEEHHHHTSTTSCTTTTEEEEECCC---------S
T ss_pred EECCCCCEEEEE--eCCcCcEEEEEe--cCCEEEEEeCCCcEE--EEECCCCCCccccccchheeeccCC---------C
Confidence 999986433221 123345677766 778899999999875 5998654321 11222233 2
Q ss_pred eeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEEC
Q 019384 244 YPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFS 294 (342)
Q Consensus 244 ~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~s 294 (342)
.+|.+++| ++.+|++|+.||+|++||+.+........ ...+..++.|.
T Consensus 386 ~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 386 GRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp SCCCCEEE--CSSCEEECCSSSEEEEEC-----------------------
T ss_pred CCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeee
Confidence 36889999 78899999999999999998765443322 22344555554
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.6e-27 Score=218.51 Aligned_cols=275 Identities=14% Similarity=0.079 Sum_probs=202.1
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee------eecCCceEEEEEeCCCCe-EEEecCCcEEEEEeccC
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE------FMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHG 91 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~------~~h~~~V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~ 91 (342)
...+.+++|+|++.++++++.|++|++||+.+++.... ..|.+.|.+++|++++.+ ++++.|+.+++|++.++
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 45677999999878888888999999999988765442 268889999999877665 58888999999999887
Q ss_pred ce-eecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEE--eccCCeEEEEE----
Q 019384 92 KE-DILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSL--SLVGNRLVVAT---- 163 (342)
Q Consensus 92 ~~-~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~~~~~s---- 163 (342)
+. ..+..|...+.+++|+|+++.+ ++++.|+.|++||++++.. .........+..+ +.+++.+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-----IRKTDKIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-----EEECCCCSEEEEEEECTTSSEEEEEEEESC
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-----EEEecCCCCceEEEEcCCCCEEEEEECCCC
Confidence 63 4566888999999999999887 4566899999999875322 2222222334444 44566788777
Q ss_pred ----cCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceE-EEEccCCeEEEEEeechhhhhcccceeeeEEecCC
Q 019384 164 ----AGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGY-ALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEA 238 (342)
Q Consensus 164 ----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~ 238 (342)
.|+.|++||+++++.... ......+.+++++|+++.+ ++++.++.+ ++||........ .+. +
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~g~~l~~~~~~~~~v--~v~d~~~~~~~~--~~~-~----- 343 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDT---IGPPGNKRHIVSGNTENKIYVSDMCCSKI--EVYDLKEKKVQK--SIP-V----- 343 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEE---EEEEECEEEEEECSSTTEEEEEETTTTEE--EEEETTTTEEEE--EEE-C-----
T ss_pred ccccCCCeEEEEECCCCcEEee---ccCCCCcceEEECCCCCEEEEEecCCCEE--EEEECCCCcEEE--Eec-C-----
Confidence 478999999987632211 1223356788999999765 455777765 569986432211 111 1
Q ss_pred CCceeeeeeEEEEcCCCCeEEEecC---------------CCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEE
Q 019384 239 GRDIVYPVNAIAFHPIYGTFATGGC---------------DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~sgs~---------------Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~ 303 (342)
...+.+++|+|++++|++++. ||.|++||..+++.+..+.. ...+.+++|+|||++|+++
T Consensus 344 ----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 344 ----FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp ----SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEE
T ss_pred ----CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEE
Confidence 124789999999998887765 57999999999888877765 4578999999999999988
Q ss_pred EeccccCCCCCCCCCcEEEEEcc
Q 019384 304 SSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 304 s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
+..+ + .|.+|+++
T Consensus 419 ~~~d---~-------~i~v~~~~ 431 (433)
T 3bws_A 419 DFLD---H-------QIRVYRRD 431 (433)
T ss_dssp ETTT---T-------EEEEEEET
T ss_pred ECCC---C-------eEEEEEec
Confidence 7532 1 58888875
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=3.1e-28 Score=226.33 Aligned_cols=256 Identities=13% Similarity=0.144 Sum_probs=179.0
Q ss_pred eecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCc------------eeecccCC------------cceeEEEEeCC
Q 019384 57 FMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGK------------EDILGKHD------------APVRCIEYSYA 111 (342)
Q Consensus 57 ~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~------------~~~~~~h~------------~~V~~~~~~~~ 111 (342)
..|.+.|.+++|++++. +++|+.|+.|++|++.+.. ...+.+|. ..|.+++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 45789999999998765 4689999999999998765 33567898 88999999999
Q ss_pred C--CEEEEeeCCCcEEEEcCCCCCCcc--------------------------------------eeeeeecCCCCcEEE
Q 019384 112 A--GQVITGSWDKSLKCWDPRGASGQE--------------------------------------RTLVGTYPQPERVYS 151 (342)
Q Consensus 112 ~--~~l~sgs~D~~I~iWd~~~~~~~~--------------------------------------~~~~~~~~~~~~v~~ 151 (342)
+ ..|++++.|++|++||+....... ......+......+.
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 789999999999999975421100 000112222333445
Q ss_pred EeccCCeEEEEEcCCeEEEEeCCCCCCcccc------cccccceeeEEEEEeeCC-ceEEEEccCCeEEEEEeechhhhh
Q 019384 152 LSLVGNRLVVATAGRHVNVYDLRNMSQPEQR------RESSLKYQTRCVRCYPNG-TGYALSSVEGRVAMEFFDLSEASQ 224 (342)
Q Consensus 152 ~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~------~~~~~~~~~~~v~~~~~~-~~~~~~s~~~~~~i~~~d~~~~~~ 224 (342)
++.+++.++++ .|+.|++||++........ ....+...+.+++++|++ ..+++++.|+.+. +||.+....
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~--iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR--LCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE--EEETTTCSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE--EEECcCCcc
Confidence 55567788888 8999999999843222110 111334568899999998 8999999999765 599865432
Q ss_pred cc--cceeeeEEecCCC---CceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC-ceeeeccCCCCcc-----------
Q 019384 225 AK--KYAFKCHRKSEAG---RDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN-KKRLYQYSKYPTS----------- 287 (342)
Q Consensus 225 ~~--~~~~~~h~~~~~~---~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~-~~~~~~~~~~~~~----------- 287 (342)
.. ...+..|...... ..+..+|.+++|+|++++|++++. ++|++||+++ ++.+..+.+|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 11 2233333320000 001126999999999999999999 9999999987 7778888877532
Q ss_pred ----eEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 288 ----IAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 288 ----V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
+..++|+|||++|++++.+. .|.+|++..
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg-----------~v~iwd~~~ 373 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNN-----------FFRMFDRNT 373 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTT-----------EEEEEETTT
T ss_pred ccccceEEEECCCCCEEEEeccCC-----------EEEEEEcCC
Confidence 33499999999999988765 466666653
No 114
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=8.8e-27 Score=211.23 Aligned_cols=238 Identities=17% Similarity=0.153 Sum_probs=169.2
Q ss_pred eeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCC
Q 019384 56 EFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASG 134 (342)
Q Consensus 56 ~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~ 134 (342)
...|.+.|.+++|++++.+++++.+..+++|+.......... +...+..+++.++++.+ ++++.|++|++||.+++..
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQ-EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEE-ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeee-ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 356999999999999988877666777899998766543222 22357888898888777 6788899999999875432
Q ss_pred cceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEE--EccCCeE
Q 019384 135 QERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYAL--SSVEGRV 212 (342)
Q Consensus 135 ~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~s~~~~~ 212 (342)
+........+.++.++++.++++ .++.|++||+.+......... .....+++++ ..+++ ++.++.+
T Consensus 94 -----~~~~~~~~~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~----~~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 94 -----VSRIKVDAPVKDLFLSREFIVVS-YGDVISVFKFGNPWKRITDDI----RFGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp -----EEEEECSSCEEEEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCE----EEEEEEEEET--TEEEEEESSCTTCE
T ss_pred -----EEEEECCCceEEEEEcCCEEEEE-EcCEEEEEECCCCceeeEEec----cCCceEEEEc--cEEEEeCCCcCcEE
Confidence 12222445678888888876655 578999999987622211111 1223344455 55555 4677876
Q ss_pred EEEEeechhhhhc--------------ccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCe-EEEEeCCCcee
Q 019384 213 AMEFFDLSEASQA--------------KKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGF-VNVWDGNNKKR 277 (342)
Q Consensus 213 ~i~~~d~~~~~~~--------------~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~-I~iWd~~~~~~ 277 (342)
++||....... ....+.+|. .+|.+++|+|++.+|++|+.|++ |+|||++++++
T Consensus 162 --~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~---------~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 162 --HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT---------NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp --EEEECCC------------------CCEEECCCS---------SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred --EEEECCCCCccccccccccccccCcccEEEEccC---------CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 45888643200 023344443 36999999999999999999998 99999999999
Q ss_pred eeccC-C-CCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 278 LYQYS-K-YPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 278 ~~~~~-~-~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
+..+. + |...|++++|+|||++|++++.+. .|.+|++++.
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~-----------~v~iw~~~~~ 272 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKW-----------TLHVFEIFND 272 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTC-----------EEEEEESSCC
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCC-----------EEEEEEccCC
Confidence 98887 5 999999999999999999998765 5777777543
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=3.2e-26 Score=209.27 Aligned_cols=251 Identities=16% Similarity=0.122 Sum_probs=182.4
Q ss_pred CeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe--EEEecCCcEEEEEeccCceeecccCCcceeEEEEe
Q 019384 32 DHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG--FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYS 109 (342)
Q Consensus 32 ~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~--~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~ 109 (342)
..+++++.|++|++||+.++++...+.+...+.+++|++++.. ++++.|+.|++||+.+++......+...+.+++|+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 82 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEEC
Confidence 4678899999999999999887777766677999999988764 46668999999999887754333333489999999
Q ss_pred CCCCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEE--EeccCCeE-EEEEcCCeEEEEeCCCCCCccccccc
Q 019384 110 YAAGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYS--LSLVGNRL-VVATAGRHVNVYDLRNMSQPEQRRES 185 (342)
Q Consensus 110 ~~~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~~-~~~s~d~~v~iwd~~~~~~~~~~~~~ 185 (342)
|++++| ++++.|++|++||++++.. ...+. ....+.. ++.+++.+ ++++.++.|++||+++++... ..
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~--~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-~~-- 154 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTV--AGTVK---TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TV-- 154 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEE--EEEEE---CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EE--
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeE--EEEEe---CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EE--
Confidence 999977 4566779999999875432 11222 2233444 44455666 677778999999998763321 11
Q ss_pred ccceeeEEEEEeeCCceE-EEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEec--
Q 019384 186 SLKYQTRCVRCYPNGTGY-ALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGG-- 262 (342)
Q Consensus 186 ~~~~~~~~v~~~~~~~~~-~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs-- 262 (342)
.....+.+++++|+++.+ ++++.++.+ ++||.+....... +. + ...+.+++|+|++++|++++
T Consensus 155 ~~~~~~~~~~~~~dg~~l~~~~~~~~~v--~~~d~~~~~~~~~--~~-~---------~~~~~~~~~~~~g~~l~~~~~~ 220 (391)
T 1l0q_A 155 SVGRSPKGIAVTPDGTKVYVANFDSMSI--SVIDTVTNSVIDT--VK-V---------EAAPSGIAVNPEGTKAYVTNVD 220 (391)
T ss_dssp ECCSSEEEEEECTTSSEEEEEETTTTEE--EEEETTTTEEEEE--EE-C---------SSEEEEEEECTTSSEEEEEEEC
T ss_pred ecCCCcceEEECCCCCEEEEEeCCCCEE--EEEECCCCeEEEE--Ee-c---------CCCccceEECCCCCEEEEEecC
Confidence 112345788999999877 455667765 5699865422111 11 1 11478899999999998887
Q ss_pred -CCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 263 -CDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 263 -~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
.|+.|++||.++++.+..+..+. .+.+++|+|||++|+++++
T Consensus 221 ~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 221 KYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp SSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET
T ss_pred cCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcC
Confidence 68999999999988887777664 5789999999998865543
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.1e-26 Score=212.59 Aligned_cols=243 Identities=13% Similarity=0.040 Sum_probs=174.2
Q ss_pred CCCCCeEEEEEcCCCCeE-EEEeCCCcEEEEECC--Cceeeeee---ecCCceEEEEEeCCCC-eEEEecCCcEEEEEec
Q 019384 17 PPSDGISNLRFSNHSDHL-LVSSWDKSVRLYDAS--ANVLRGEF---MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFS 89 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l-~s~s~Dgti~vwd~~--~~~~~~~~---~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~ 89 (342)
+|.+.|++++|+|++++| ++++.||+|+|||+. ++.....+ .|...|.+++|++++. +++++.|+.+++|++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 566789999999999996 899999999999998 66544443 5778999999997765 5688999999999987
Q ss_pred cCcee-----ecccCCcceeEEEEeCC---CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEE
Q 019384 90 HGKED-----ILGKHDAPVRCIEYSYA---AGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVV 161 (342)
Q Consensus 90 ~~~~~-----~~~~h~~~V~~~~~~~~---~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~ 161 (342)
..... .+.+|...|.+++|+|+ +.+|++|+.|++|++||+++.... ......+......+.++ +++.+++
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV-DKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE-EEECCCCSSCEEEEEEC-STTEEEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee-eeeecCCCCceEEEEEC-CCCEEEE
Confidence 76533 56789999999999999 889999999999999998764331 11122222223334455 6889999
Q ss_pred EEcCCeEEEEeCCCCCCccccccc-----------------------ccceeeEEEEEeeCCceEEEEc-cCCeEEEEEe
Q 019384 162 ATAGRHVNVYDLRNMSQPEQRRES-----------------------SLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFF 217 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~~~~-----------------------~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~ 217 (342)
++.|++|++||+++++........ .....+..++++|+++.+++++ .++.+ ++|
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i--~iw 335 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCI--IIL 335 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEE--EEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeE--EEE
Confidence 999999999999987532211100 1123467889999999998888 77765 568
Q ss_pred ec--hhhhh-cccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecC------CCeEEEEeCC
Q 019384 218 DL--SEASQ-AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC------DGFVNVWDGN 273 (342)
Q Consensus 218 d~--~~~~~-~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~------Dg~I~iWd~~ 273 (342)
++ ..... .....+..| ..|.+++|+|++.++++++. +..|++|.+.
T Consensus 336 ~~~~~~~~~l~~~~~~~~~----------~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 336 EMSEKQKGDLALKQIITFP----------YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EECSSSTTCEEEEEEEECS----------SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EeccCCCCceeeccEeccC----------CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 87 22211 111112222 25899999996444444443 5568888654
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=9.3e-27 Score=213.99 Aligned_cols=239 Identities=13% Similarity=-0.015 Sum_probs=151.7
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeee------eeecCCceEEEEEeC--------CC-CeEEEecCCcE
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRG------EFMHGGPVLDCCFHD--------DS-SGFSASADHTV 83 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~------~~~h~~~V~~~~~~~--------~~-~~~s~s~D~~i 83 (342)
...+....+++++..||+++.|++|||||+..+.... ..+|.+.|++++|+| ++ .+++||.|+++
T Consensus 89 ~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv 168 (393)
T 4gq1_A 89 DGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL 168 (393)
T ss_dssp --------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE
T ss_pred CCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE
Confidence 3344445556677889999999999999998764322 347999999999975 33 45799999999
Q ss_pred EEEEeccCc-eeecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcCCCCCCcceeee---------------------
Q 019384 84 RRLVFSHGK-EDILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDPRGASGQERTLV--------------------- 140 (342)
Q Consensus 84 ~~w~~~~~~-~~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~~~~~~~~~~~~--------------------- 140 (342)
++||+.++. ...+.+|...|.+++|+|++. +|++|+.|++|++||++++........
T Consensus 169 ~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 169 IIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp EEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred EEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 999998765 445678889999999999874 799999999999999876432110000
Q ss_pred --eecCCCCcEEEEe-ccCCeEEEEEcCCeEEEEeCCCCCCccccccc-----------------ccceeeEEEEEee--
Q 019384 141 --GTYPQPERVYSLS-LVGNRLVVATAGRHVNVYDLRNMSQPEQRRES-----------------SLKYQTRCVRCYP-- 198 (342)
Q Consensus 141 --~~~~~~~~v~~~s-~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~-----------------~~~~~~~~v~~~~-- 198 (342)
..+......+.+. .++..+++++.|+++++||+............ .... .....++|
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 327 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRY 327 (393)
T ss_dssp ---CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC-SSCCEECSSC
T ss_pred ecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc-ceeEEEccCC
Confidence 0011111222333 46778999999999999999765322111000 0000 01122333
Q ss_pred CCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeC
Q 019384 199 NGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDG 272 (342)
Q Consensus 199 ~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~ 272 (342)
++..+++++.|+.+ ++||...... ...+..|. .+|.+|+|||||++||+++.|| +.+|.+
T Consensus 328 ~~~~~~sgs~Dg~V--~lwd~~~~~~--~~~~~~~~---------~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 328 MDYFATAHSQHGLI--QLINTYEKDS--NSIPIQLG---------MPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTEEEEEETTTTEE--EEEETTCTTC--CEEEEECS---------SCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CCEEEEEECCCCEE--EEEECCCCcE--EEEecCCC---------CcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 33345667788876 5699864422 22222332 2699999999999999998776 555543
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=2.9e-26 Score=206.81 Aligned_cols=241 Identities=13% Similarity=0.169 Sum_probs=177.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEE--eCCCC-eEEEecCCcEEEEEeccCc
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCF--HDDSS-GFSASADHTVRRLVFSHGK 92 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~--~~~~~-~~s~s~D~~i~~w~~~~~~ 92 (342)
..|...|++++|+|++++|++++.||+|+|||+.++.......|.+.|.+++| ++++. +++++.|+.|++||+.+++
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 46889999999999999999999999999999999888888899999999999 66655 6799999999999998876
Q ss_pred ee-ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCC----eEEEEEcCCe
Q 019384 93 ED-ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGN----RLVVATAGRH 167 (342)
Q Consensus 93 ~~-~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~----~~~~~s~d~~ 167 (342)
.. .+..| ..+.++.+.+ ..+++++.|+.+++||++..................+..+..... .+++++.|+.
T Consensus 163 ~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 239 (368)
T 3mmy_A 163 PMMVLQLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR 239 (368)
T ss_dssp CSEEEECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE
T ss_pred EEEEEecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc
Confidence 43 34444 4667777664 578889999999999987543211111111223334445554443 3999999999
Q ss_pred EEEEeCCCCCCcccc-cccccce------------eeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEE
Q 019384 168 VNVYDLRNMSQPEQR-RESSLKY------------QTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHR 234 (342)
Q Consensus 168 v~iwd~~~~~~~~~~-~~~~~~~------------~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~ 234 (342)
|++||++........ ....... .+.+++++|++..+++++.|+.+. +||...... ...+..|.
T Consensus 240 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~--iwd~~~~~~--~~~~~~~~ 315 (368)
T 3mmy_A 240 VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFS--FWDKDARTK--LKTSEQLD 315 (368)
T ss_dssp EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEE--EEETTTTEE--EEECCCCS
T ss_pred EEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEE--EEECCCCcE--EEEecCCC
Confidence 999999875321110 0011111 478899999999999999999864 599864322 22233332
Q ss_pred ecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeC
Q 019384 235 KSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDG 272 (342)
Q Consensus 235 ~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~ 272 (342)
.+|.+++|+|++.+|++|+.|+..+.|+.
T Consensus 316 ---------~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 316 ---------QPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp ---------SCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ---------CCceEEEECCCCCeEEEEecccccccccc
Confidence 36999999999999999999886666654
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1e-25 Score=199.06 Aligned_cols=276 Identities=12% Similarity=0.039 Sum_probs=168.5
Q ss_pred CeEEEEEcCCCC---eEEEEeCCCcEEEEECCCc---e-eeeeeecCCceEEEEEeCCCCeEEEe--cCC---cEEEEEe
Q 019384 21 GISNLRFSNHSD---HLLVSSWDKSVRLYDASAN---V-LRGEFMHGGPVLDCCFHDDSSGFSAS--ADH---TVRRLVF 88 (342)
Q Consensus 21 ~V~~l~fs~~~~---~l~s~s~Dgti~vwd~~~~---~-~~~~~~h~~~V~~~~~~~~~~~~s~s--~D~---~i~~w~~ 88 (342)
.+.++.|-..+- -+++++. .+|++|+..++ + +.....|+.+|..+.|.|+..-+.|- ..- .++..-+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 455666665543 3555554 58999999776 3 34445788899999998764322111 111 1111111
Q ss_pred ccC-----ceeecccCCcceeEEEEeCCCCEEEEee--CCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec---cCCe
Q 019384 89 SHG-----KEDILGKHDAPVRCIEYSYAAGQVITGS--WDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL---VGNR 158 (342)
Q Consensus 89 ~~~-----~~~~~~~h~~~V~~~~~~~~~~~l~sgs--~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~---~~~~ 158 (342)
... ....-.+|...|.++ ++++++.+++ .|++|++|++... +.....+..+.....+.+|++ +++.
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~~~~~~v~~l~fs~~~g~~~~ 195 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAED-GGGKENQFLMPPEETILTFAEVQGMQEA 195 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTT-SCEEEEEEECCCSSCEEEEEEEETSTTE
T ss_pred CCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCC-CceeeeeccCCCceeeEEeeccCCCCce
Confidence 111 111224466566655 4554444433 5999999998532 222223344555677888888 5579
Q ss_pred EEEEEcCCeEEEEeCCCCCCcccccccc-cceeeEEEEEeeCCceEEE------------EccCCeEEEEEeechhhhhc
Q 019384 159 LVVATAGRHVNVYDLRNMSQPEQRRESS-LKYQTRCVRCYPNGTGYAL------------SSVEGRVAMEFFDLSEASQA 225 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~------------~s~~~~~~i~~~d~~~~~~~ 225 (342)
+++++.|++|++||+.+++........+ ....+.+++|+|++..+++ ++.|+++ ++||.......
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tI--klWd~~tgk~l 273 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQL--IVINPKTTLSV 273 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEE--EEEETTTTEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEE--EEEECCCCEEE
Confidence 9999999999999999875433221111 1123567789999987644 4455544 56887543221
Q ss_pred cccee---eeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceE-EEEECCCCCEEE
Q 019384 226 KKYAF---KCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIA-ALSFSRDGRLLA 301 (342)
Q Consensus 226 ~~~~~---~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~-~v~~spdg~~la 301 (342)
..+.+ .+|. ..+.+..+ ++..+|+|+.|++|+|||+.+++++.++++|...+. +++|||||++|+
T Consensus 274 ~v~~~~~p~Gh~---------~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 274 GVMLYCLPPGQA---------GRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp EEEEECCCTTCC---------CCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred EEEEeeccCCCc---------ceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 11110 0111 11222233 377899999999999999999999999999987665 689999999999
Q ss_pred EEEeccccCCCCCCCCCcEEEEEc
Q 019384 302 VASSYTFEEGDKPHEPDAIFVRSV 325 (342)
Q Consensus 302 s~s~~~~~~~~~~~~~~~~~~~~~ 325 (342)
+|+.+. .|.+|+.
T Consensus 343 SGS~D~-----------TIklWd~ 355 (356)
T 2w18_A 343 AGQKDG-----------NIFVYHY 355 (356)
T ss_dssp EECTTS-----------CEEEEEE
T ss_pred EEECCC-----------cEEEecC
Confidence 998766 5888864
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=5.6e-25 Score=201.03 Aligned_cols=262 Identities=11% Similarity=0.061 Sum_probs=187.7
Q ss_pred CCCeEEEEEcCCCCeE-EEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe-E-EEecCCcEEEEEeccCceee
Q 019384 19 SDGISNLRFSNHSDHL-LVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-F-SASADHTVRRLVFSHGKEDI 95 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l-~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~-s~s~D~~i~~w~~~~~~~~~ 95 (342)
...+.+++|+|++++| ++++.|++|++||+.++++...+.+...+.+++|++++.. + +++.|+.|++||+.+++...
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 4569999999999987 6777999999999998888777777779999999987764 3 44567999999999887544
Q ss_pred cccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeE-EEEEcCCeEEEEeC
Q 019384 96 LGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRL-VVATAGRHVNVYDL 173 (342)
Q Consensus 96 ~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~-~~~s~d~~v~iwd~ 173 (342)
...+...+.+++|+|+++.| ++++.|+.|++||++++.. ...+... .....+.++.+++.+ ++++.++.|++||+
T Consensus 111 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 111 TVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 43445678999999999877 7888999999999875432 1222211 122233455556666 56677899999999
Q ss_pred CCCCCcccccccccceeeEEEEEeeCCceEEEEc---cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEE
Q 019384 174 RNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS---VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIA 250 (342)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s---~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~ 250 (342)
++...... . .....+.+++++|+++.+++++ .++. +++||....... ..+..|. .+.+++
T Consensus 188 ~~~~~~~~-~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~--v~~~d~~~~~~~--~~~~~~~----------~~~~~~ 250 (391)
T 1l0q_A 188 VTNSVIDT-V--KVEAAPSGIAVNPEGTKAYVTNVDKYFNT--VSMIDTGTNKIT--ARIPVGP----------DPAGIA 250 (391)
T ss_dssp TTTEEEEE-E--ECSSEEEEEEECTTSSEEEEEEECSSCCE--EEEEETTTTEEE--EEEECCS----------SEEEEE
T ss_pred CCCeEEEE-E--ecCCCccceEECCCCCEEEEEecCcCCCc--EEEEECCCCeEE--EEEecCC----------CccEEE
Confidence 87632211 1 1233567889999999888887 4554 467998643221 1222221 367899
Q ss_pred EcCCCCeE-EEecCCCeEEEEeCCCceeeeccCCCCcce---EEEEECCCCCEE
Q 019384 251 FHPIYGTF-ATGGCDGFVNVWDGNNKKRLYQYSKYPTSI---AALSFSRDGRLL 300 (342)
Q Consensus 251 ~sp~~~~l-~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V---~~v~~spdg~~l 300 (342)
|+|++++| ++++.|++|++||.++++.+..+..+..+. ..+.+.|++..+
T Consensus 251 ~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
T 1l0q_A 251 VTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVY 304 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCC
T ss_pred EccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccc
Confidence 99999877 778999999999999998887776665442 235666665543
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=5.1e-26 Score=200.96 Aligned_cols=202 Identities=15% Similarity=0.064 Sum_probs=137.4
Q ss_pred cCCCCCCCCeEEEEEcCC----CCeEEEEeC--------------------CCcEEEEECCC-ce-eeeeeecCCceEEE
Q 019384 13 ELGNPPSDGISNLRFSNH----SDHLLVSSW--------------------DKSVRLYDASA-NV-LRGEFMHGGPVLDC 66 (342)
Q Consensus 13 ~~~~~~~~~V~~l~fs~~----~~~l~s~s~--------------------Dgti~vwd~~~-~~-~~~~~~h~~~V~~~ 66 (342)
-|+|.+...|++|+|+|| ++.+++++. |++|++|++.. ++ +.....|...+..+
T Consensus 105 ~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 105 ALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL 184 (356)
T ss_dssp EECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEE
T ss_pred eeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeE
Confidence 467888899999999999 888887663 88888888843 44 33455788888887
Q ss_pred EEeC---CCC-eEEEecCCcEEEEEeccCce-eecccCC---cceeEEEEeCCCCEE------------EEeeCCCcEEE
Q 019384 67 CFHD---DSS-GFSASADHTVRRLVFSHGKE-DILGKHD---APVRCIEYSYAAGQV------------ITGSWDKSLKC 126 (342)
Q Consensus 67 ~~~~---~~~-~~s~s~D~~i~~w~~~~~~~-~~~~~h~---~~V~~~~~~~~~~~l------------~sgs~D~~I~i 126 (342)
+|++ ++. +++++.|++|++||+.+++. ..+.+|. ..|.+++|+|++..+ +||+.|++|++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 8764 334 56899999999999999874 4565543 467888999999875 67889999999
Q ss_pred EcCCCCCCcceeeee-e--cCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceE
Q 019384 127 WDPRGASGQERTLVG-T--YPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGY 203 (342)
Q Consensus 127 Wd~~~~~~~~~~~~~-~--~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 203 (342)
||..++... ..+. . ..+.....+.+.++..+++++.|++|+|||+.+++..
T Consensus 265 Wd~~tgk~l--~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l------------------------ 318 (356)
T 2w18_A 265 INPKTTLSV--GVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCT------------------------ 318 (356)
T ss_dssp EETTTTEEE--EEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEE------------------------
T ss_pred EECCCCEEE--EEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEE------------------------
Confidence 998754221 1110 0 1122234444455667888888999999998765210
Q ss_pred EEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeC
Q 019384 204 ALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDG 272 (342)
Q Consensus 204 ~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~ 272 (342)
..+.+|... .+.+++|||||++|++|+.|++|+|||.
T Consensus 319 ------------------------~tL~gH~~~--------vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 319 ------------------------ALLPPVSDQ--------HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ------------------------EEECCC--C--------CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ------------------------EEecCCCCC--------eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 001122110 2446899999999999999999999985
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.4e-25 Score=198.84 Aligned_cols=232 Identities=12% Similarity=0.063 Sum_probs=163.1
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC---------ceeee--eeecCCceEEEEEeC--CCCe-EEEecCCcEE
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASA---------NVLRG--EFMHGGPVLDCCFHD--DSSG-FSASADHTVR 84 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~---------~~~~~--~~~h~~~V~~~~~~~--~~~~-~s~s~D~~i~ 84 (342)
...|.+++|+|+ ++|++.|++|++|+... +.... ...|.+.|.+++|++ ++.. ++++.|++++
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 356777888887 99999999999998753 33222 235778999999988 6654 6899999999
Q ss_pred EEEeccCceee-c-ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEE
Q 019384 85 RLVFSHGKEDI-L-GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLV 160 (342)
Q Consensus 85 ~w~~~~~~~~~-~-~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~ 160 (342)
+||+.+++... . ..|...|.+++|+|++.+|++|+.|++|++||+++..... ..+.. .+...+.++.+ ++..++
T Consensus 153 ~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~-~~~~~-~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS-SRFPV-DEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC-EECCC-CTTSCEEEEEECTTSSEEE
T ss_pred EEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc-cEEec-cCCCCEEEEEEeCCCCEEE
Confidence 99999887532 2 3466689999999999999999999999999998654321 12222 13344555544 566888
Q ss_pred EEEcCCeEEEEeCCCCCCcccccc---cccceeeEEEEEeeCCceEEEEcc-CCeEEEEEeechhhhhcccceeeeEEec
Q 019384 161 VATAGRHVNVYDLRNMSQPEQRRE---SSLKYQTRCVRCYPNGTGYALSSV-EGRVAMEFFDLSEASQAKKYAFKCHRKS 236 (342)
Q Consensus 161 ~~s~d~~v~iwd~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~s~-~~~~~i~~~d~~~~~~~~~~~~~~h~~~ 236 (342)
+++ +++|++||+++......... ........+++++|+++.+++++. ++.+. +|+..... +.+..
T Consensus 231 s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~--v~~~~~~~--~~~~~------ 299 (343)
T 3lrv_A 231 VEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLT--IYKFDKKT--KNWTK------ 299 (343)
T ss_dssp EEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEE--EEEECTTT--CSEEE------
T ss_pred EEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEE--EEEEcccc--cceEe------
Confidence 888 55999999998654321111 001111146899999999999887 88765 57764322 22221
Q ss_pred CCCCceeeeeeEEEEcC---CCCeEEEecCCCeEEEEeCC
Q 019384 237 EAGRDIVYPVNAIAFHP---IYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 237 ~~~~~~~~~v~~v~~sp---~~~~l~sgs~Dg~I~iWd~~ 273 (342)
.++..++|+| +...+++++.||.++++-..
T Consensus 300 -------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 300 -------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp -------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred -------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 2577888998 88899999999999998544
No 123
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=202.59 Aligned_cols=210 Identities=18% Similarity=0.258 Sum_probs=158.1
Q ss_pred eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc----CCeEEEEEcCCeEE
Q 019384 94 DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV----GNRLVVATAGRHVN 169 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~----~~~~~~~s~d~~v~ 169 (342)
..+.+|...|.+++|+|++++|++|+.|++|++||++.........+. .+...+.++.+. ++.+++++.|+.|+
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec--CCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 356789999999999999999999999999999998643322212222 234456555553 67899999999999
Q ss_pred EEeCCCCCCcccccccccceeeEEEEEeeC--CceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 170 VYDLRNMSQPEQRRESSLKYQTRCVRCYPN--GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
+||+.+...............+.+++++|+ +..+++++.++.+. +||...........+..|. .+|.
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~--v~d~~~~~~~~~~~~~~~~---------~~v~ 151 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS--VVEFKENGTTSPIIIDAHA---------IGVN 151 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE--EEECCTTSCCCEEEEECCT---------TCEE
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEE--EEecCCCCceeeEEecCCC---------CceE
Confidence 999987642122222234456889999999 89999999999765 5888654333333333332 2699
Q ss_pred EEEEcC-------------CCCeEEEecCCCeEEEEeCCCce----eeeccCCCCcceEEEEECCC---CCEEEEEEecc
Q 019384 248 AIAFHP-------------IYGTFATGGCDGFVNVWDGNNKK----RLYQYSKYPTSIAALSFSRD---GRLLAVASSYT 307 (342)
Q Consensus 248 ~v~~sp-------------~~~~l~sgs~Dg~I~iWd~~~~~----~~~~~~~~~~~V~~v~~spd---g~~las~s~~~ 307 (342)
+++|+| ++.+|++|+.||+|++||++++. .+..+.+|...|.+++|+|| +++|++++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 999999 68999999999999999987543 45678899999999999999 89999998765
Q ss_pred ccCCCCCCCCCcEEEEEccC
Q 019384 308 FEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~ 327 (342)
.|.+|++..
T Consensus 232 -----------~i~iwd~~~ 240 (379)
T 3jrp_A 232 -----------TCIIWTQDN 240 (379)
T ss_dssp -----------CEEEEEESS
T ss_pred -----------EEEEEeCCC
Confidence 366666653
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=9.1e-25 Score=202.17 Aligned_cols=268 Identities=10% Similarity=0.056 Sum_probs=190.7
Q ss_pred CCeEEEEEcCCCC-eEEEEe----CCC----cEEEEEC--CCceee---eeeecCCceEEEEEeC---------------
Q 019384 20 DGISNLRFSNHSD-HLLVSS----WDK----SVRLYDA--SANVLR---GEFMHGGPVLDCCFHD--------------- 70 (342)
Q Consensus 20 ~~V~~l~fs~~~~-~l~s~s----~Dg----ti~vwd~--~~~~~~---~~~~h~~~V~~~~~~~--------------- 70 (342)
..|....|++.+. .+++|+ .|| +++|||+ .+++.+ ...+|...+..+++.+
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4678888888875 555776 467 9999999 776543 2456777776666542
Q ss_pred CCCeEEEecC------CcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCC---cEEEEcCCCCCCcceeeee
Q 019384 71 DSSGFSASAD------HTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDK---SLKCWDPRGASGQERTLVG 141 (342)
Q Consensus 71 ~~~~~s~s~D------~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~---~I~iWd~~~~~~~~~~~~~ 141 (342)
+.+++.++.+ +.|++||++......+.+|...|.+++|+|+++.|++++.|+ .|++||++++.. ..+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~---~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV---RQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE---EEee
Confidence 4556655544 689999998766777888999999999999999999999885 999999976432 1232
Q ss_pred ecCCCCcEEEEeccCCeEE-EEEcCC--eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEcc-CCeEEEEEe
Q 019384 142 TYPQPERVYSLSLVGNRLV-VATAGR--HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSV-EGRVAMEFF 217 (342)
Q Consensus 142 ~~~~~~~v~~~s~~~~~~~-~~s~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~-~~~~~i~~~ 217 (342)
.+........++++++.++ +++.++ .|.+||+.++... . .........+++|+|+++.+++++. ++...+++|
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--~-l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--Q-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--E-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE--e-CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 2222233445666677777 555555 4999999876421 1 1122345678899999998887775 566677888
Q ss_pred echhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCC---CeEEEEeCCCceeeeccCCCCcceEEEEEC
Q 019384 218 DLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCD---GFVNVWDGNNKKRLYQYSKYPTSIAALSFS 294 (342)
Q Consensus 218 d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~D---g~I~iWd~~~~~~~~~~~~~~~~V~~v~~s 294 (342)
|...... . .+..| ...+.+++|+|+|++|++++.+ ..|++||.++++. ..+..+. .+.+++|+
T Consensus 297 d~~~~~~-~--~l~~~---------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~s 362 (415)
T 2hqs_A 297 NINGGAP-Q--RITWE---------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLA 362 (415)
T ss_dssp ETTSSCC-E--ECCCS---------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEEC
T ss_pred ECCCCCE-E--EEecC---------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEc
Confidence 8754321 1 11111 1247789999999999888764 5899999998765 3455554 89999999
Q ss_pred CCCCEEEEEEecc
Q 019384 295 RDGRLLAVASSYT 307 (342)
Q Consensus 295 pdg~~las~s~~~ 307 (342)
|||++|+.++.+.
T Consensus 363 pdg~~l~~~s~~~ 375 (415)
T 2hqs_A 363 PNGTMVIYSSSQG 375 (415)
T ss_dssp TTSSEEEEEEEET
T ss_pred CCCCEEEEEEcCC
Confidence 9999999888654
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=6.1e-23 Score=190.04 Aligned_cols=271 Identities=11% Similarity=0.072 Sum_probs=187.8
Q ss_pred CCCCeEEEE---EcCCCCeEEEE--------------eCCCcEEEEECC--Cc--eeeeeeecCCceEEEEEeCCCCeE-
Q 019384 18 PSDGISNLR---FSNHSDHLLVS--------------SWDKSVRLYDAS--AN--VLRGEFMHGGPVLDCCFHDDSSGF- 75 (342)
Q Consensus 18 ~~~~V~~l~---fs~~~~~l~s~--------------s~Dgti~vwd~~--~~--~~~~~~~h~~~V~~~~~~~~~~~~- 75 (342)
...+++.++ |+|+++.++.. +.|+.++||.+. ++ .....+.....+.+++|++++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAI 138 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEE
Confidence 456788888 89887776543 334434555543 34 344444455667799998866665
Q ss_pred EEecCCcEEEEEeccCcee------ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcE
Q 019384 76 SASADHTVRRLVFSHGKED------ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERV 149 (342)
Q Consensus 76 s~s~D~~i~~w~~~~~~~~------~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v 149 (342)
+++.|+.|++||+.+++.. .+.+|...|.+++|++++..+++++.|++|++||+++... ...+..+......
T Consensus 139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~--~~~~~~~~~~~~~ 216 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY--KATVDLTGKWSKI 216 (433)
T ss_dssp EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE--EEEEECSSSSEEE
T ss_pred EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE--EEEEcCCCCCeeE
Confidence 5566788999999887643 2457889999999999999999999999999999875432 1222222222233
Q ss_pred EEEeccCCeEEEE-EcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCC------eEEEEEeechhh
Q 019384 150 YSLSLVGNRLVVA-TAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEG------RVAMEFFDLSEA 222 (342)
Q Consensus 150 ~~~s~~~~~~~~~-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~------~~~i~~~d~~~~ 222 (342)
+.++.+++.++++ +.++.|++||+++++.... ......+.+++++|+++.+++++.+. +-.+++||....
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK---TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEE---CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE---ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 4455556666544 4789999999987633211 12233578899999999888877411 224567998644
Q ss_pred hhcccceeeeEEecCCCCceeeeeeEEEEcCCCCe-EEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEE
Q 019384 223 SQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGT-FATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLA 301 (342)
Q Consensus 223 ~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~-l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 301 (342)
.... ...|. ..+.+++|+|+++. +++++.|++|++||.++++.+..+. +...+.+++|+|||++|+
T Consensus 294 ~~~~---~~~~~---------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 294 KLID---TIGPP---------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEE---EEEEE---------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred cEEe---eccCC---------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEE
Confidence 2211 11222 24778999999975 5777999999999999888777665 667899999999999998
Q ss_pred EEEec
Q 019384 302 VASSY 306 (342)
Q Consensus 302 s~s~~ 306 (342)
+++..
T Consensus 361 ~~~~~ 365 (433)
T 3bws_A 361 VSCRG 365 (433)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 88764
No 126
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=2.5e-23 Score=193.26 Aligned_cols=209 Identities=17% Similarity=0.235 Sum_probs=151.5
Q ss_pred eeeeecCCceEEEEEeCC-C-CeEEEecCCcEEEEEeccC----------c-eeecccCCcceeEEEEeCCCC-EEEEee
Q 019384 54 RGEFMHGGPVLDCCFHDD-S-SGFSASADHTVRRLVFSHG----------K-EDILGKHDAPVRCIEYSYAAG-QVITGS 119 (342)
Q Consensus 54 ~~~~~h~~~V~~~~~~~~-~-~~~s~s~D~~i~~w~~~~~----------~-~~~~~~h~~~V~~~~~~~~~~-~l~sgs 119 (342)
.....|.+.|++++|+++ + .+++++.|+.|++|++... . ...+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445689999999999975 3 4568899999999999862 2 345678999999999999987 999999
Q ss_pred CCCcEEEEcCCCCCCccee---eeeecCCCCcEEEEecc---CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEE
Q 019384 120 WDKSLKCWDPRGASGQERT---LVGTYPQPERVYSLSLV---GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRC 193 (342)
Q Consensus 120 ~D~~I~iWd~~~~~~~~~~---~~~~~~~~~~v~~~s~~---~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 193 (342)
.||+|++||++........ ......+...+.++.+. +..+++++.|+.|++||+++.....
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~------------- 268 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK------------- 268 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS-------------
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc-------------
Confidence 9999999999753221110 01111233445555543 4577788888888888887642100
Q ss_pred EEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeC
Q 019384 194 VRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDG 272 (342)
Q Consensus 194 v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~ 272 (342)
....+..|. .+|++++|+|++. +|++|+.||+|++||+
T Consensus 269 --------------------------------~~~~~~~~~---------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 269 --------------------------------PSHTVDAHT---------AEVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp --------------------------------CSEEEECCS---------SCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred --------------------------------ceeEeecCC---------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 000011121 1588999999987 6899999999999999
Q ss_pred CC-ceeeeccCCCCcceEEEEECCCCC-EEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 273 NN-KKRLYQYSKYPTSIAALSFSRDGR-LLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 273 ~~-~~~~~~~~~~~~~V~~v~~spdg~-~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
++ ...+..+..|...|.+++|+|+++ +|++++.++ .|.+|++..
T Consensus 308 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-----------~i~iwd~~~ 353 (430)
T 2xyi_A 308 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----------RLHVWDLSK 353 (430)
T ss_dssp TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----------CCEEEEGGG
T ss_pred CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-----------cEEEEeCCC
Confidence 87 456778888999999999999996 577777654 366666653
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=5.9e-23 Score=203.20 Aligned_cols=275 Identities=10% Similarity=0.017 Sum_probs=195.5
Q ss_pred CCCeEEEEEcCCCCeEEEEeC-CC-----cEEEEECCCceeeeeee-cC------------------------CceEEEE
Q 019384 19 SDGISNLRFSNHSDHLLVSSW-DK-----SVRLYDASANVLRGEFM-HG------------------------GPVLDCC 67 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~-Dg-----ti~vwd~~~~~~~~~~~-h~------------------------~~V~~~~ 67 (342)
...|.+++|||||++|++++. |+ +|++||+.+++...... +. ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999999998 88 99999998876554443 22 2378899
Q ss_pred EeCCCCeEEEecCCcEEEEEeccC---ceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC
Q 019384 68 FHDDSSGFSASADHTVRRLVFSHG---KEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYP 144 (342)
Q Consensus 68 ~~~~~~~~s~s~D~~i~~w~~~~~---~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~ 144 (342)
|+|+++.+..+.++.|.+|++.++ ....+..|...+.+++|+|||++|+.++ ++.|.+||+.++.. ........
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~--~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ--MQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE--EECCCCCC
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE--EEeccCCc
Confidence 999888654444599999999988 6666778888999999999999999887 56999999875322 11111100
Q ss_pred C----------------CCcEEEEeccCCeEEEEEcCC---------------------------------eEEEEeCCC
Q 019384 145 Q----------------PERVYSLSLVGNRLVVATAGR---------------------------------HVNVYDLRN 175 (342)
Q Consensus 145 ~----------------~~~v~~~s~~~~~~~~~s~d~---------------------------------~v~iwd~~~ 175 (342)
. ....+.++++++.|++++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 0 013356788888898887765 788899987
Q ss_pred -CCCcccccccccceeeEEEEEeeCCceEEEEcc---CCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEE
Q 019384 176 -MSQPEQRRESSLKYQTRCVRCYPNGTGYALSSV---EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAF 251 (342)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~---~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~ 251 (342)
++.............+..++| |+|+.+++.+. .....+++||..+.... ..+..+... ....+..++|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~-----~~~~~~~~~~ 344 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR--VLAHETSPT-----WVPLHNSLRF 344 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE--EEEEEECSS-----CCCCCSCCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE--EEEEcCCCC-----cCCcCCceEE
Confidence 643211111123345678899 99998887653 34567888998653221 112222110 0012467899
Q ss_pred cCCCCeEEEecCCCeEEEEeCC-CceeeeccCCCCcceEEE-EECCCCCEEEEEEe
Q 019384 252 HPIYGTFATGGCDGFVNVWDGN-NKKRLYQYSKYPTSIAAL-SFSRDGRLLAVASS 305 (342)
Q Consensus 252 sp~~~~l~sgs~Dg~I~iWd~~-~~~~~~~~~~~~~~V~~v-~~spdg~~las~s~ 305 (342)
+|||+++++++.||+++||... +++ ...+..+...|.++ +|||||++|+..+.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~ 399 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAG 399 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEEC
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEe
Confidence 9999999999999988888765 344 77788888888887 59999998876665
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=1.2e-22 Score=188.02 Aligned_cols=249 Identities=10% Similarity=0.004 Sum_probs=182.5
Q ss_pred CCeEEEEeCC------CcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCC---cEEEEEeccCceeecccCC
Q 019384 31 SDHLLVSSWD------KSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADH---TVRRLVFSHGKEDILGKHD 100 (342)
Q Consensus 31 ~~~l~s~s~D------gti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~---~i~~w~~~~~~~~~~~~h~ 100 (342)
+.+++.++.+ ++|++||+.++.......|.+.|.+++|+|+++ +++++.|+ .|++||+.+++...+..|.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC
Confidence 6677776654 799999998777777778999999999998876 45777775 8999999988877778888
Q ss_pred cceeEEEEeCCCCEEE-EeeCCCc--EEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcC-C--eEEEEeCC
Q 019384 101 APVRCIEYSYAAGQVI-TGSWDKS--LKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAG-R--HVNVYDLR 174 (342)
Q Consensus 101 ~~V~~~~~~~~~~~l~-sgs~D~~--I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d-~--~v~iwd~~ 174 (342)
..+.+++|+||++.|+ +++.|+. |.+||++++.. ..+..+........++++++.+++++.+ + .|.+||+.
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 8999999999999887 7777665 99999875432 2222222222334556667778877764 4 57778987
Q ss_pred CCCCcccccccccceeeEEEEEeeCCceEEEEccC-CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC
Q 019384 175 NMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE-GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP 253 (342)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~-~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp 253 (342)
++.... . ........+++++|+++.+++++.+ +...+++||...... ..+..| ..+.+++|+|
T Consensus 300 ~~~~~~--l-~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~----------~~~~~~~~sp 363 (415)
T 2hqs_A 300 GGAPQR--I-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV---QVLSST----------FLDETPSLAP 363 (415)
T ss_dssp SSCCEE--C-CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE---EECCCS----------SSCEEEEECT
T ss_pred CCCEEE--E-ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE---EEecCC----------CCcCCeEEcC
Confidence 754221 1 1122356678999999998887654 456778899864322 112211 1478899999
Q ss_pred CCCeEEEecCCC---eEEEEeCCCceeeeccCCCCcceEEEEECCCCCE
Q 019384 254 IYGTFATGGCDG---FVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRL 299 (342)
Q Consensus 254 ~~~~l~sgs~Dg---~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~ 299 (342)
+|++|++++.|+ .|++||+. ++....+..|.+.|.+++|||.-.+
T Consensus 364 dg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 364 NGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp TSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCCC
T ss_pred CCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccccc
Confidence 999999988877 89999987 4557788899999999999997543
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.8e-23 Score=182.41 Aligned_cols=257 Identities=12% Similarity=0.041 Sum_probs=178.8
Q ss_pred EEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEecc-Ccee-ecccC-CcceeEEEEeCCC
Q 019384 36 VSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSH-GKED-ILGKH-DAPVRCIEYSYAA 112 (342)
Q Consensus 36 s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~-~~~~-~~~~h-~~~V~~~~~~~~~ 112 (342)
+++.|++|++||+.+++......|.+.|.+++|++++..+..+.++.|.+|++.+ ++.. ....| ...|.+++|+|++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 5678999999999998888788899999999999988876666689999999988 6643 33444 4778999999999
Q ss_pred CEEEEee--CCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEE-EEEcCCeEEEEeCCCCCCcccccccccce
Q 019384 113 GQVITGS--WDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKY 189 (342)
Q Consensus 113 ~~l~sgs--~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 189 (342)
+.|++++ .++.++||.++...... ..+... .......++.+++.++ ++..++.+++|++........ .......
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET-RLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce-EcccCCC
Confidence 9999988 44566666553222221 112111 1122334555666666 678889999998643211111 1122234
Q ss_pred eeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCC----
Q 019384 190 QTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCD---- 264 (342)
Q Consensus 190 ~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~D---- 264 (342)
.+.++.++|+++.+++++ .++.+.++.++.... ....+..| ...+..++|+|++++|++++.+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~---------~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDS---------AYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCC---------SEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecC---------CcccCCeEECCCCCEEEEEEcCCCCC
Confidence 567889999999887665 477776655553221 11112222 1357889999999999888766
Q ss_pred -------CeEEEEeCCCcee--eeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 265 -------GFVNVWDGNNKKR--LYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 265 -------g~I~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
+.|++||.++++. +..+.+|...+.+++|+|||++|++++.++
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5799999987654 444557888899999999999999888754
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=8.4e-22 Score=177.02 Aligned_cols=287 Identities=14% Similarity=0.116 Sum_probs=199.5
Q ss_pred CCCeEEEEEcCCCCeEEEEeC-------CCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eE-EEecCCcEEEEEec
Q 019384 19 SDGISNLRFSNHSDHLLVSSW-------DKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GF-SASADHTVRRLVFS 89 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~-------Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~-s~s~D~~i~~w~~~ 89 (342)
..++..++|+|++++|++++. +++|.+||..+++....+.....+.+++|++++. ++ +...++.+.+||..
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 467899999999999888774 5789999999888777666667788999998776 44 44557899999998
Q ss_pred cCce-eecccCCc---------ceeEEEEeCCCCEEEEee--CCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCC
Q 019384 90 HGKE-DILGKHDA---------PVRCIEYSYAAGQVITGS--WDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGN 157 (342)
Q Consensus 90 ~~~~-~~~~~h~~---------~V~~~~~~~~~~~l~sgs--~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~ 157 (342)
+++. ..+..+.. .+.+++|+|+++.++.++ .++.|.+||+++... ...+...........++.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL--KTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--EEEECCCCTTCCCCEEETTTT
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce--EEEecCCCCccceEEECCCCC
Confidence 8774 23333221 278899999999877665 478999999875432 112221112123346777888
Q ss_pred eEEEEEcCCeEEEEeCCCCCCccccccc--ccceeeEEEEEeeCCceEEEEccC-CeEEEEEeechhhhhcccceeeeEE
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRES--SLKYQTRCVRCYPNGTGYALSSVE-GRVAMEFFDLSEASQAKKYAFKCHR 234 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~s~~-~~~~i~~~d~~~~~~~~~~~~~~h~ 234 (342)
.++++..++.|.+||+.+++........ ........++++|+++.++++..+ +. +.+||.......... ..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~--v~~~d~~~~~~~~~~--~~-- 271 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE--VLVVDTRNGNILAKV--AA-- 271 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE--EEEEETTTCCEEEEE--EC--
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE--EEEEECCCCcEEEEE--Ec--
Confidence 8999999999999999876432211110 112345678899999977766544 54 467988543222111 11
Q ss_pred ecCCCCceeeeeeEEEEcCCCCeE-EEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCC
Q 019384 235 KSEAGRDIVYPVNAIAFHPIYGTF-ATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDK 313 (342)
Q Consensus 235 ~~~~~~~~~~~v~~v~~sp~~~~l-~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~ 313 (342)
+ ....++|+|+++++ ++...+++|.+||..+++.+..+... ..+.+++|+|||++|.++...+...+.+
T Consensus 272 ----~-----~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~~~~~ 341 (353)
T 3vgz_A 272 ----P-----ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQKSTKQQE 341 (353)
T ss_dssp ----S-----SCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECCCBTTBC
T ss_pred ----C-----CCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccccccccc
Confidence 0 12468999999955 55567999999999998887766543 4689999999999888888776555565
Q ss_pred CCCCCcEEEE
Q 019384 314 PHEPDAIFVR 323 (342)
Q Consensus 314 ~~~~~~~~~~ 323 (342)
...++.|+..
T Consensus 342 ~~~~~~v~~i 351 (353)
T 3vgz_A 342 ATQPDDVIRI 351 (353)
T ss_dssp CSSCEEEEEE
T ss_pred ccCCCcEEEE
Confidence 5566655543
No 131
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.3e-24 Score=211.32 Aligned_cols=209 Identities=18% Similarity=0.258 Sum_probs=157.0
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--c--CCeEEEEEcCCeEEE
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--V--GNRLVVATAGRHVNV 170 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~--~~~~~~~s~d~~v~i 170 (342)
.+.+|.+.|++++|+|++++|++|+.||+|++||+.+........+. .+...|.++.+ + ++.+++++.|+.|++
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc--CCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 46789999999999999999999999999999998643332222222 23445655555 3 678999999999999
Q ss_pred EeCCCCCCcccccccccceeeEEEEEeeC--CceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE
Q 019384 171 YDLRNMSQPEQRRESSLKYQTRCVRCYPN--GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA 248 (342)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~ 248 (342)
||+.++..............+.+++++|+ +..+++++.++.+. +||...........+..|. .+|.+
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~--vwdl~~~~~~~~~~~~~~~---------~~v~~ 150 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS--VVEFKENGTTSPIIIDAHA---------IGVNS 150 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE--EEECCSSSCCCCEEEECCS---------SCEEE
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE--EEEeecCCCcceeEeecCC---------CceEE
Confidence 99987632122222234456889999999 89999999999765 5998654333333333333 26999
Q ss_pred EEEcC-------------CCCeEEEecCCCeEEEEeCCCc----eeeeccCCCCcceEEEEECCC---CCEEEEEEeccc
Q 019384 249 IAFHP-------------IYGTFATGGCDGFVNVWDGNNK----KRLYQYSKYPTSIAALSFSRD---GRLLAVASSYTF 308 (342)
Q Consensus 249 v~~sp-------------~~~~l~sgs~Dg~I~iWd~~~~----~~~~~~~~~~~~V~~v~~spd---g~~las~s~~~~ 308 (342)
++|+| ++.+|++|+.||+|++||.+++ ..+..+.+|...|.+++|+|+ |++|++++.++
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg- 229 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR- 229 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-
T ss_pred EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-
Confidence 99999 5899999999999999998765 556778899999999999999 89999998765
Q ss_pred cCCCCCCCCCcEEEEEccC
Q 019384 309 EEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~ 327 (342)
.|.+|++..
T Consensus 230 ----------~I~iwd~~~ 238 (753)
T 3jro_A 230 ----------TCIIWTQDN 238 (753)
T ss_dssp ----------CEEEEEESS
T ss_pred ----------EEEEecCCC
Confidence 477777654
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=3.9e-22 Score=190.52 Aligned_cols=290 Identities=12% Similarity=0.044 Sum_probs=193.1
Q ss_pred CeEEEEEcCCCCeEEEEeCCCcEEEEEC--CCceeeeeeecCCceEEEEEeC----CCCe-EEEe-cCCcEEEEEeccCc
Q 019384 21 GISNLRFSNHSDHLLVSSWDKSVRLYDA--SANVLRGEFMHGGPVLDCCFHD----DSSG-FSAS-ADHTVRRLVFSHGK 92 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~Dgti~vwd~--~~~~~~~~~~h~~~V~~~~~~~----~~~~-~s~s-~D~~i~~w~~~~~~ 92 (342)
.+..++|+|||++|++++.|++|++||+ .+++....+.+...+..++|++ +++. ++++ .+++|.+||..+.+
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 3899999999999999999999999999 7777766666777889999998 7765 5666 48999999988876
Q ss_pred ee-eccc----------C-CcceeEEEEeCCCCE-EEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeE
Q 019384 93 ED-ILGK----------H-DAPVRCIEYSYAAGQ-VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRL 159 (342)
Q Consensus 93 ~~-~~~~----------h-~~~V~~~~~~~~~~~-l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~ 159 (342)
.. .+.. | ...+.++.+++++.. +++...+++|.+||..+........+. ......-..++.+++++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEE
Confidence 32 2221 2 237899999997755 577888999999998754322111222 11122234677777766
Q ss_pred EEE-EcCCeEEEEeCCCCCCccccccc--ccceeeEEEEEeeCC-ceEEEEc-cCCeEEEEEeechhhhh-----cccce
Q 019384 160 VVA-TAGRHVNVYDLRNMSQPEQRRES--SLKYQTRCVRCYPNG-TGYALSS-VEGRVAMEFFDLSEASQ-----AKKYA 229 (342)
Q Consensus 160 ~~~-s~d~~v~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~-~~~~~~s-~~~~~~i~~~d~~~~~~-----~~~~~ 229 (342)
+++ ..+++|.+||+.+++........ ++......+ ++|++ ..++++. .++++ .+||...... .....
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V--~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSI--SLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEE--EEEECCTTTCTTTBTSEEEE
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceE--EEEEeCCCCCchhcCeEEEE
Confidence 655 45789999999987432211111 111111222 46774 4445544 45665 5688754211 11112
Q ss_pred eeeEEecCCCCceeeeeeEEEEcCCCCeEEEec-------CCCeEEEEeCCCceee-ec--------cCCCCcceEEEEE
Q 019384 230 FKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGG-------CDGFVNVWDGNNKKRL-YQ--------YSKYPTSIAALSF 293 (342)
Q Consensus 230 ~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs-------~Dg~I~iWd~~~~~~~-~~--------~~~~~~~V~~v~~ 293 (342)
+..|. ..+..|+|||++++|++++ .+++|.|||+++++.. .. +..+...+..++|
T Consensus 416 l~~~g---------~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 486 (543)
T 1nir_A 416 LQGQG---------GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 486 (543)
T ss_dssp EECSC---------SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE
T ss_pred EEcCC---------CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccC
Confidence 22221 1367799999999999987 3789999999987665 33 2466789999999
Q ss_pred CCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCCc
Q 019384 294 SRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEIE 329 (342)
Q Consensus 294 spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (342)
+|||++|.++....-+ ..+.|.||....+.
T Consensus 487 ~~~g~~~~~s~~~~~~------~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 487 NKRGDEVWFSVWNGKN------DSSALVVVDDKTLK 516 (543)
T ss_dssp CSSSSEEEEEEECCTT------SCCEEEEEETTTTE
T ss_pred CCCCCEEEEEeecCCC------CCCeEEEEECCCce
Confidence 9999998876432200 12358888766443
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=2.6e-22 Score=197.62 Aligned_cols=269 Identities=12% Similarity=-0.009 Sum_probs=182.2
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEecc-----Ccee
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSH-----GKED 94 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~-----~~~~ 94 (342)
..|.+++|||| ++++.+ .|++|++||+.+++......+.+.+.+++|+|+++.+..+.|+.|.+|++.+ ++..
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE
Confidence 57999999999 666554 4699999999988877777788889999999998876667899999999988 6643
Q ss_pred e-cccCCcc--------------eeEEEEeCCCCEEEEee---------------------------------CCCcEEE
Q 019384 95 I-LGKHDAP--------------VRCIEYSYAAGQVITGS---------------------------------WDKSLKC 126 (342)
Q Consensus 95 ~-~~~h~~~--------------V~~~~~~~~~~~l~sgs---------------------------------~D~~I~i 126 (342)
. ...+... +.+++|+||+++|++++ .+..|.+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 3 2333332 58999999999999887 4467999
Q ss_pred EcCCCCCCcceeeeeecCCCCcE--EEEeccCCeEEEEEcCC-----eEEEEeCCCCCCcccccccccce---eeEEEEE
Q 019384 127 WDPRGASGQERTLVGTYPQPERV--YSLSLVGNRLVVATAGR-----HVNVYDLRNMSQPEQRRESSLKY---QTRCVRC 196 (342)
Q Consensus 127 Wd~~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~~~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~ 196 (342)
||++++.. ........+...+ +.++.+++.+++++.++ +|.+||+.+++............ ....+.+
T Consensus 240 ~d~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 240 YHLATGKT--VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EETTTTEE--EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EECCCCce--EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 99875432 1111111122233 45566677888888776 89999998762221111100010 1245789
Q ss_pred ee--CCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE-EEEcCCCCeEEE-ecCCC----eEE
Q 019384 197 YP--NGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA-IAFHPIYGTFAT-GGCDG----FVN 268 (342)
Q Consensus 197 ~~--~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~-v~~sp~~~~l~s-gs~Dg----~I~ 268 (342)
+| +++.+++++.++.+.++.++.... . ...+..| ...+.. ++|+|+++.|+. ++.++ .|+
T Consensus 318 sp~~dg~~l~~~~~~g~~~l~~~~~~~~-~--~~~l~~~---------~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 318 LPGSNNQFIWQSRRDGWNHLYLYDTTGR-L--IRQVTKG---------EWEVTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp CTTCSSEEEEEECTTSSCEEEEEETTSC-E--EEECCCS---------SSCEEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred ecCCCCEEEEEEccCCccEEEEEECCCC-E--EEecCCC---------CeEEEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 99 999888888888877766663211 1 1112211 113555 799999987755 44554 677
Q ss_pred EEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 269 VWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 269 iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
.||..+++ +..+. +...+.+++|||||++|+..++.
T Consensus 386 ~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 386 CIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEEC
T ss_pred EEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecC
Confidence 77777654 33343 56679999999999998877653
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=2.7e-22 Score=198.51 Aligned_cols=267 Identities=15% Similarity=0.093 Sum_probs=186.1
Q ss_pred CeEEEEEcCCCCeEEEEeCCCcEEEEECCCc---eeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeec-
Q 019384 21 GISNLRFSNHSDHLLVSSWDKSVRLYDASAN---VLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDIL- 96 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~---~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~- 96 (342)
.|.+++|||||++|++++. ++|++||+.++ .......|.+.+..++|+|+++.+..+.++.|.+|++.+++...+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 4889999999999999887 99999999887 666666788899999999999876555678999999988765433
Q ss_pred ccCCcc----------------eeEEEEeCCCCEEEEeeCCC---------------------------------cEEEE
Q 019384 97 GKHDAP----------------VRCIEYSYAAGQVITGSWDK---------------------------------SLKCW 127 (342)
Q Consensus 97 ~~h~~~----------------V~~~~~~~~~~~l~sgs~D~---------------------------------~I~iW 127 (342)
..+... +.+++|+||++.|++++.|+ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 233322 47899999999999988776 78899
Q ss_pred cCCC-CCCcceeeeeecCCCC--cEEEEeccCCeEEEEEc-----CCeEEEEeCCCCCCcccccccccce---eeEEEEE
Q 019384 128 DPRG-ASGQERTLVGTYPQPE--RVYSLSLVGNRLVVATA-----GRHVNVYDLRNMSQPEQRRESSLKY---QTRCVRC 196 (342)
Q Consensus 128 d~~~-~~~~~~~~~~~~~~~~--~v~~~s~~~~~~~~~s~-----d~~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~ 196 (342)
|+.+ +... .......+.. ....+ .+++.+++++. +.+|.+||+.+++....... .... .+..++|
T Consensus 269 d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 269 SPAEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE-TSPTWVPLHNSLRF 344 (741)
T ss_dssp CSSTTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE-ECSSCCCCCSCCEE
T ss_pred ECCCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc-CCCCcCCcCCceEE
Confidence 9875 4321 1111101122 23456 77778877654 45799999987643221111 1111 2246789
Q ss_pred eeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEE-EEcCCCCeE-EEecCCC--eEEEEeC
Q 019384 197 YPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAI-AFHPIYGTF-ATGGCDG--FVNVWDG 272 (342)
Q Consensus 197 ~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v-~~sp~~~~l-~sgs~Dg--~I~iWd~ 272 (342)
+|+++.+++++.++...++.+|.... ...+..|. ..|..+ +|+|+++.| ++++.|+ +++||++
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~----~~~l~~~~---------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK----AAALTHGN---------WSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC----EEESCCSS---------SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC----eeeeeecc---------eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 99999888888888888877775321 11222221 136666 699999876 4566666 8999987
Q ss_pred CC-ceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 273 NN-KKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 273 ~~-~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
.. +.....+.. ...+.+++|||||++|+...+.
T Consensus 412 ~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 412 PLQGGQPQRLSK-APGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp ETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEE
T ss_pred EcCCCCeeeccc-CCCceEEEECCCCCEEEEEecC
Confidence 63 444556655 5668999999999998877653
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=6e-22 Score=194.97 Aligned_cols=274 Identities=12% Similarity=0.091 Sum_probs=187.5
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee--eeeeecC-----------------CceEEEEEeCCCCeEEEec
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL--RGEFMHG-----------------GPVLDCCFHDDSSGFSASA 79 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~--~~~~~h~-----------------~~V~~~~~~~~~~~~s~s~ 79 (342)
...+..++|+ ++.+++++.|+ | +||+.+++. .....|. ..|.+++|+++ ..+..+.
T Consensus 25 ~~~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~ 99 (706)
T 2z3z_A 25 PEYVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT 99 (706)
T ss_dssp ---CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE
T ss_pred cccCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE
Confidence 4567788998 77888888888 8 999988776 5555543 56999999988 5555557
Q ss_pred CCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCC-----CCCcceeeeeecCCC--------
Q 019384 80 DHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRG-----ASGQERTLVGTYPQP-------- 146 (342)
Q Consensus 80 D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~-----~~~~~~~~~~~~~~~-------- 146 (342)
|+.+++||+.+++...+..+...+.+++|+||++.|+.+ .|+.|++||+.+ +.. ..........
T Consensus 100 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~--~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA--IAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC--EESCSCCBTTEEESSCCG
T ss_pred CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc--EEeccCCCCCeEcccchh
Confidence 799999999888766666777789999999999999885 689999999875 332 1111111110
Q ss_pred ------CcEEEEeccCCeEEEEE---------------------------------cCCeEEEEeCCCCCCccccccccc
Q 019384 147 ------ERVYSLSLVGNRLVVAT---------------------------------AGRHVNVYDLRNMSQPEQRRESSL 187 (342)
Q Consensus 147 ------~~v~~~s~~~~~~~~~s---------------------------------~d~~v~iwd~~~~~~~~~~~~~~~ 187 (342)
.....++++++.|++++ .+..|.+||+.++...........
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 13456788888888887 335799999987542211111122
Q ss_pred ceeeEEEEEeeCCceEEEEccCC---eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC--CCCeEEEec
Q 019384 188 KYQTRCVRCYPNGTGYALSSVEG---RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP--IYGTFATGG 262 (342)
Q Consensus 188 ~~~~~~v~~~~~~~~~~~~s~~~---~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp--~~~~l~sgs 262 (342)
...+..++|+|+++.+++++.+. ...+++||..+...... +..+... .....+..++|+| +|++|++++
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~--~~~~~~~----~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT--LFVETDK----HYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE--EEEEECS----SCCCCCSCCEECTTCSSEEEEEEC
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE--EEEccCC----CeECccCCceeecCCCCEEEEEEc
Confidence 34567899999999888876543 35678899864311111 1111110 0011246789999 999999999
Q ss_pred CCCeEEEEeCC-CceeeeccCCCCcceEE-EEECCCCCEEEEEEec
Q 019384 263 CDGFVNVWDGN-NKKRLYQYSKYPTSIAA-LSFSRDGRLLAVASSY 306 (342)
Q Consensus 263 ~Dg~I~iWd~~-~~~~~~~~~~~~~~V~~-v~~spdg~~las~s~~ 306 (342)
.|++++||+.+ +++.+..+..+...+.+ ++|+|||+.|+.++..
T Consensus 331 ~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 99999999876 56667777888777877 8999999988877754
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=4.9e-21 Score=171.07 Aligned_cols=267 Identities=10% Similarity=0.041 Sum_probs=169.4
Q ss_pred CeEEEEeCCCcEEEEECC-Cc--eeeeeeecCCceEEEEEeCCCC-eEEEecC-CcEEEEEec--cCcee---ecccCCc
Q 019384 32 DHLLVSSWDKSVRLYDAS-AN--VLRGEFMHGGPVLDCCFHDDSS-GFSASAD-HTVRRLVFS--HGKED---ILGKHDA 101 (342)
Q Consensus 32 ~~l~s~s~Dgti~vwd~~-~~--~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D-~~i~~w~~~--~~~~~---~~~~h~~ 101 (342)
..+++++.|++|++||+. ++ .......|...+.+++|++++. +++++.+ +.+++|++. ++... .+..+.
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 345555889999999985 33 3444567888899999998876 5666665 899999997 44432 223333
Q ss_pred ceeEEEEeCCCCEEEEee-CCCcEEEEcCCCCCCcceeeeeecCC--CCcEEEEeccCCeEEEEE-cCCeEEEEeCCC-C
Q 019384 102 PVRCIEYSYAAGQVITGS-WDKSLKCWDPRGASGQERTLVGTYPQ--PERVYSLSLVGNRLVVAT-AGRHVNVYDLRN-M 176 (342)
Q Consensus 102 ~V~~~~~~~~~~~l~sgs-~D~~I~iWd~~~~~~~~~~~~~~~~~--~~~v~~~s~~~~~~~~~s-~d~~v~iwd~~~-~ 176 (342)
.+.+++|+|+++.|++++ .++.|.+||++.+. .......... ....+.++.+++.+++++ .++.|.+||+.+ +
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL--PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE--EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc--cccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 789999999999876655 48899999984211 1111221111 122345666677777776 889999999986 3
Q ss_pred CCccc---ccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc
Q 019384 177 SQPEQ---RRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH 252 (342)
Q Consensus 177 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s 252 (342)
..... .........+..++++|+++.+++++ .++.+ .+|+.......... +........+......+..++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i--~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV--DVWELKDPHGNIEC-VQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE--EEEESSCTTSCCEE-EEEEECSCTTCCSCCCEEEEEEC
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE--EEEEecCCCCcEEE-EeeccccCccccccCCccceEEC
Confidence 22110 11112223466789999999775554 66655 55777432111110 11111011110111235679999
Q ss_pred CCCCeEE-EecCCCeEEEEeCC--C--ceeeeccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 253 PIYGTFA-TGGCDGFVNVWDGN--N--KKRLYQYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 253 p~~~~l~-sgs~Dg~I~iWd~~--~--~~~~~~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
|++++|+ ++..|+.|++||+. + .+.+..+..+.. +.+++|+|||++|++++.
T Consensus 240 ~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 240 PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECT
T ss_pred CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecC
Confidence 9998776 66689999999987 2 344444544444 889999999999988874
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.2e-21 Score=187.21 Aligned_cols=265 Identities=11% Similarity=0.042 Sum_probs=181.8
Q ss_pred EcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEe--ccCceeecccCCcce
Q 019384 27 FSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVF--SHGKEDILGKHDAPV 103 (342)
Q Consensus 27 fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~--~~~~~~~~~~h~~~V 103 (342)
|+|++..+++++.|++|++||..++++...+.....+..++|+++++ +++++.|++|++||+ .+.+......+...+
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p 224 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA 224 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCc
Confidence 78999999999999999999999888776665333488999998775 568999999999999 665533222245668
Q ss_pred eEEEEeC----CCCEEEEee-CCCcEEEEcCCCCCCcceeeeeec---------CCCCcEEEE--eccCC-eEEEEEcCC
Q 019384 104 RCIEYSY----AAGQVITGS-WDKSLKCWDPRGASGQERTLVGTY---------PQPERVYSL--SLVGN-RLVVATAGR 166 (342)
Q Consensus 104 ~~~~~~~----~~~~l~sgs-~D~~I~iWd~~~~~~~~~~~~~~~---------~~~~~v~~~--s~~~~-~~~~~s~d~ 166 (342)
..++|+| +++++++++ .+++|.+||..+.... ..+... .....+..+ +.++. .+++...++
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~--~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK--QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE--EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc--eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 9999999 999998887 5899999998754321 222110 011134444 44334 456667788
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeee
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYP 245 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~ 245 (342)
+|.+||+.+........ .........+.++|+++++++++ .++++ .+||..+.+.... +.. ....|.+.
T Consensus 303 ~i~vvd~~~~~~l~~~~-i~~~~~~~~~~~spdg~~l~va~~~~~~v--~v~D~~tg~l~~~--i~~-----g~~ph~g~ 372 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTS-IGAAPFLHDGGWDSSHRYFMTAANNSNKV--AVIDSKDRRLSAL--VDV-----GKTPHPGR 372 (543)
T ss_dssp EEEEEECTTSSSCEEEE-EECCSSCCCEEECTTSCEEEEEEGGGTEE--EEEETTTTEEEEE--EEC-----SSSBCCTT
T ss_pred eEEEEEecCCCcceeEE-eccCcCccCceECCCCCEEEEEecCCCeE--EEEECCCCeEEEe--ecc-----CCCCCCCC
Confidence 99999998754322111 11122345678999999876554 56665 4599865432211 111 00111111
Q ss_pred eeEEEEcCC-CCeEEEec-CCCeEEEEeCCC-------ceeeeccCCCCcceEEEEECCCCCEEEEEE
Q 019384 246 VNAIAFHPI-YGTFATGG-CDGFVNVWDGNN-------KKRLYQYSKYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 246 v~~v~~sp~-~~~l~sgs-~Dg~I~iWd~~~-------~~~~~~~~~~~~~V~~v~~spdg~~las~s 304 (342)
...+ ++|+ +..++++. .|++|.|||..+ .+.++++.+|...+..++|+|||++|.+++
T Consensus 373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred Cccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 1122 4787 66677775 689999999988 788899999988899999999999999876
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=2.4e-21 Score=186.64 Aligned_cols=261 Identities=14% Similarity=0.059 Sum_probs=179.8
Q ss_pred CCCeEEEEEcCCCCeEEEEeC-CCcEEEEECCCceeeeeeecC-CceEEEEEeCCCCeEEEec---CCcEEEEEecc--C
Q 019384 19 SDGISNLRFSNHSDHLLVSSW-DKSVRLYDASANVLRGEFMHG-GPVLDCCFHDDSSGFSASA---DHTVRRLVFSH--G 91 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~-Dgti~vwd~~~~~~~~~~~h~-~~V~~~~~~~~~~~~s~s~---D~~i~~w~~~~--~ 91 (342)
...|++++|+|||++||+++. ||+++||++.++..+....|. ..+..+.|+|+..+++++. +...++|.+.. .
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTST
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCC
Confidence 346999999999999999887 999999999877766665565 6899999998833345543 45567776654 2
Q ss_pred -ceeecccCCcceeEEEEeCCCCE-EEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcC----
Q 019384 92 -KEDILGKHDAPVRCIEYSYAAGQ-VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAG---- 165 (342)
Q Consensus 92 -~~~~~~~h~~~V~~~~~~~~~~~-l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d---- 165 (342)
....+..+ ..+...+|+|+++. +++++.++.+.+||++++.. .. +..... ....++++++.+++++.+
T Consensus 101 g~~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~--~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 101 GEEQRLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL--RE-LARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TCCEECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE--EE-EEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred CccccccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE--EE-eecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 22222222 23446688888753 34444444455999875422 22 222222 456788899999988777
Q ss_pred CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeee
Q 019384 166 RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYP 245 (342)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~ 245 (342)
..|.+||+.+++... . .........++|+|||+.++.+..++...|++||....... .+..|.. .
T Consensus 175 ~~i~~~d~~~g~~~~--l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~---------~ 239 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRV--F-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE---DLELPSK---------D 239 (582)
T ss_dssp EEEEEEETTTCCCEE--E-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE---ECCCSCS---------H
T ss_pred eEEEEEcCCCCCceE--e-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE---EccCCCc---------C
Confidence 679999998764321 1 22234567889999999999777777667888998643221 2222221 2
Q ss_pred eeEEE--------EcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 246 VNAIA--------FHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 246 v~~v~--------~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
+..++ |+|||..+++++.|++++||++ ++.+.. ....|.+++|| ||+++++++++
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~---~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA---PQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC---CSSEEEEEEEE-TTEEEEEEEET
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc---CCCceEEEEec-CCEEEEEEcCC
Confidence 34444 9999988899999999999999 665542 34678999999 99999888764
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=5.5e-21 Score=170.30 Aligned_cols=265 Identities=11% Similarity=0.080 Sum_probs=176.0
Q ss_pred CeEEEEeCCCcEEEEECCCceeeeeeecCC---ceEEEEEeCCCC-eE-EEecCCcEEEEEeccCcee-ecc-c----CC
Q 019384 32 DHLLVSSWDKSVRLYDASANVLRGEFMHGG---PVLDCCFHDDSS-GF-SASADHTVRRLVFSHGKED-ILG-K----HD 100 (342)
Q Consensus 32 ~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~---~V~~~~~~~~~~-~~-s~s~D~~i~~w~~~~~~~~-~~~-~----h~ 100 (342)
++|++++.|++|++||..+++....+...+ .+..++|++++. ++ +++.++.|.+||+.+++.. .+. + |.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 478999999999999999887776665555 688999998875 43 5556789999999887643 222 2 23
Q ss_pred cceeEEEEeCCCCEEEEee------------CCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeE
Q 019384 101 APVRCIEYSYAAGQVITGS------------WDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHV 168 (342)
Q Consensus 101 ~~V~~~~~~~~~~~l~sgs------------~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v 168 (342)
..+.+++|+|+++.|++++ .++.|.+||+.+... ...+.. ........++.+++.++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--EEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE--EEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 3678899999999888875 579999999875322 112221 1122234577777777766 6889
Q ss_pred EEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCe-E---------------------EEEEeechhhhhcc
Q 019384 169 NVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR-V---------------------AMEFFDLSEASQAK 226 (342)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~-~---------------------~i~~~d~~~~~~~~ 226 (342)
.+||+.+++.......... ...+.++|++..+++....+. + .+++||.......
T Consensus 157 ~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSW---EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EEEETTTTEEEEEECSTTT---TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EEEECCCCcEeeeeecccc---CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 9999987643211110000 012256788776655443322 2 4567887543221
Q ss_pred cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 227 KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 227 ~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
...+..+. ..+.+++|+|++++|+++ ++.|++||..+++.+..+... ..+.+++|+|||++|++++.+
T Consensus 233 ~~~~~~~~---------~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 233 MREVRIMD---------VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp EEEEEECS---------SCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBS
T ss_pred EeecCCCC---------CceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCC
Confidence 11111111 136689999999999888 799999999998877665533 457899999999998887432
Q ss_pred cccCCCCCCCCCcEEEEEccCC
Q 019384 307 TFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
. .|.+|+++..
T Consensus 301 ~-----------~i~v~d~~~~ 311 (337)
T 1pby_B 301 G-----------DLAAYDAETL 311 (337)
T ss_dssp S-----------EEEEEETTTC
T ss_pred C-----------cEEEEECcCC
Confidence 2 4777776543
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=3e-20 Score=165.72 Aligned_cols=277 Identities=9% Similarity=0.070 Sum_probs=175.7
Q ss_pred EEEcCCCCe-EEEEeCCCcEEEEECCCceeeeee-ecCCceEEEEEeCCCC-eEEEec-CCcEEEEEeccCce--eeccc
Q 019384 25 LRFSNHSDH-LLVSSWDKSVRLYDASANVLRGEF-MHGGPVLDCCFHDDSS-GFSASA-DHTVRRLVFSHGKE--DILGK 98 (342)
Q Consensus 25 l~fs~~~~~-l~s~s~Dgti~vwd~~~~~~~~~~-~h~~~V~~~~~~~~~~-~~s~s~-D~~i~~w~~~~~~~--~~~~~ 98 (342)
..|++++++ +++++.+++|++||..++++.... .+...+ .++|++++. ++.++. ++.|.+||..+++. ..+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 456776665 678889999999999887765443 345556 999998876 555554 88999999988774 34455
Q ss_pred CCcceeEEEEeCCCCEEEEeeCCC---cEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEE-EcCCe-EEEEeC
Q 019384 99 HDAPVRCIEYSYAAGQVITGSWDK---SLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVA-TAGRH-VNVYDL 173 (342)
Q Consensus 99 h~~~V~~~~~~~~~~~l~sgs~D~---~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~-s~d~~-v~iwd~ 173 (342)
+..+..+++|+|++++|+++..++ .|.+||+++... ...+.. ........++++++.++++ ..++. |.+|++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF--ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE--EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe--EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 656666699999999998665553 899999875432 111211 1112334556666655555 45577 999998
Q ss_pred CCCCCcccc--cccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcc-cceeeeEEecCCCCceeeeeeEE
Q 019384 174 RNMSQPEQR--RESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAK-KYAFKCHRKSEAGRDIVYPVNAI 249 (342)
Q Consensus 174 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~-~~~~~~h~~~~~~~~~~~~v~~v 249 (342)
......... ...........++++|+++.++++. .++.+ .+||........ ...+..+ ..+..+
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v--~v~d~~~~~~~~~~~~~~~~----------~~~~~~ 226 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSI--GILETQNPENITLLNAVGTN----------NLPGTI 226 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEE--EEEECSSTTSCEEEEEEECS----------SCCCCE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeE--EEEECCCCcccceeeeccCC----------CCCceE
Confidence 753221110 1111223467889999998665554 56654 568875433200 1111111 146789
Q ss_pred EEcCCCCeEEE-ecCCCeEEEEeCCCcee--eeccCC----CCcc---eEEEEECCCCCEEEEEEeccccCCCCCCCCCc
Q 019384 250 AFHPIYGTFAT-GGCDGFVNVWDGNNKKR--LYQYSK----YPTS---IAALSFSRDGRLLAVASSYTFEEGDKPHEPDA 319 (342)
Q Consensus 250 ~~sp~~~~l~s-gs~Dg~I~iWd~~~~~~--~~~~~~----~~~~---V~~v~~spdg~~las~s~~~~~~~~~~~~~~~ 319 (342)
+|+|+|++|+. ...++.|.+||.++++. +..+.. +... ...++|+|||++|++++..+ ..
T Consensus 227 ~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~ 296 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS----------RE 296 (331)
T ss_dssp EECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT----------TE
T ss_pred EECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC----------Cc
Confidence 99999997655 45688999999998776 332221 2222 25699999999988776543 14
Q ss_pred EEEEEccC
Q 019384 320 IFVRSVNE 327 (342)
Q Consensus 320 ~~~~~~~~ 327 (342)
|.+|+++.
T Consensus 297 v~v~d~~~ 304 (331)
T 3u4y_A 297 LKVFTISG 304 (331)
T ss_dssp EEEEETTS
T ss_pred EEEEEecC
Confidence 77787764
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=3e-21 Score=190.33 Aligned_cols=274 Identities=12% Similarity=0.048 Sum_probs=181.4
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee-cCC---ceEEEEEeCCCCe-EEEecC---------CcEE
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM-HGG---PVLDCCFHDDSSG-FSASAD---------HTVR 84 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-h~~---~V~~~~~~~~~~~-~s~s~D---------~~i~ 84 (342)
...+.+++|+|||+++++ +.||+|++||+.+++...... |.. .|.+++|+|+++. ++++.+ +.+.
T Consensus 16 ~~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 16 KIHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 345789999999998776 789999999998876655544 333 4899999988875 566554 6778
Q ss_pred EEEeccCceeec---ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCC---------------
Q 019384 85 RLVFSHGKEDIL---GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQP--------------- 146 (342)
Q Consensus 85 ~w~~~~~~~~~~---~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~--------------- 146 (342)
+|++.+++...+ .+|...+.+++|+|||+.|+.++. +.|++||+.++.. ..........
T Consensus 95 ~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~--~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA--IRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC--EEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce--EEEecCCCCCceECcccceeEEEEe
Confidence 999988775433 345566899999999999998876 7999999875432 1111111111
Q ss_pred ---CcEEEEeccCCeEEEEEcCC----------------------------------eEEEEeCCCCCCccccccc----
Q 019384 147 ---ERVYSLSLVGNRLVVATAGR----------------------------------HVNVYDLRNMSQPEQRRES---- 185 (342)
Q Consensus 147 ---~~v~~~s~~~~~~~~~s~d~----------------------------------~v~iwd~~~~~~~~~~~~~---- 185 (342)
...+.++++++.|++++.++ +|++||+.+..........
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 13456777888888887653 7999999876432111110
Q ss_pred ccceeeEEEEEeeCCceEEEEcc--CCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee----eEEEEcCCCCeEE
Q 019384 186 SLKYQTRCVRCYPNGTGYALSSV--EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV----NAIAFHPIYGTFA 259 (342)
Q Consensus 186 ~~~~~~~~v~~~~~~~~~~~~s~--~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v----~~v~~sp~~~~l~ 259 (342)
.....+..++|+|+|+.++..+. +....+++||..+..... .+..+... .+ ..++|+|||+.|+
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~--------~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK--KHEDESEA--------WLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE--EEEEECSS--------CCCCCCCCCEECTTSCSEE
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE--EEEeccCC--------EEeccCCCceEcCCCCeEE
Confidence 01345678999999997766543 345677889985432211 11111110 12 3679999999776
Q ss_pred E--ecCCC------eEEEEe-CCCce--eeeccCCCCcceEE-EEECCCCCEEEEEEec
Q 019384 260 T--GGCDG------FVNVWD-GNNKK--RLYQYSKYPTSIAA-LSFSRDGRLLAVASSY 306 (342)
Q Consensus 260 s--gs~Dg------~I~iWd-~~~~~--~~~~~~~~~~~V~~-v~~spdg~~las~s~~ 306 (342)
. +..|+ .|++|| ..++. +...+..+...+.. ++|||||++|+..+..
T Consensus 322 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 322 FIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp EEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESS
T ss_pred EEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcC
Confidence 4 45677 577777 34433 15555543344544 7999999999877654
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=1.7e-20 Score=185.04 Aligned_cols=273 Identities=7% Similarity=-0.048 Sum_probs=174.5
Q ss_pred CeEEEEEcCCCCeEEEEeCC---------CcEEEEECCCceeeeee---ecCCceEEEEEeCCCCeEEEecCCcEEEEEe
Q 019384 21 GISNLRFSNHSDHLLVSSWD---------KSVRLYDASANVLRGEF---MHGGPVLDCCFHDDSSGFSASADHTVRRLVF 88 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~D---------gti~vwd~~~~~~~~~~---~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~ 88 (342)
.|.+++|||||++||+++.| ++++|||+.+++..... .|...+..++|+|+++.+..+.++.|.+|+.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 141 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAH 141 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEEC
Confidence 59999999999999999875 78889999887653332 3444588999998887665555689999999
Q ss_pred ccCceee-cccCCcc------------------eeEEEEeCCCCEEEEeeCCC---------------------------
Q 019384 89 SHGKEDI-LGKHDAP------------------VRCIEYSYAAGQVITGSWDK--------------------------- 122 (342)
Q Consensus 89 ~~~~~~~-~~~h~~~------------------V~~~~~~~~~~~l~sgs~D~--------------------------- 122 (342)
.+++... ...+... +.+++|+||++.|++++.|+
T Consensus 142 ~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (723)
T 1xfd_A 142 VGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA 221 (723)
T ss_dssp SSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred CCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence 8876443 3333332 37899999999999887653
Q ss_pred -------cEEEEcCCCCCCcceeeeeecC----CCCcE--EEEeccCCeEEEEEcC----CeEEEEeCCCCCCccccccc
Q 019384 123 -------SLKCWDPRGASGQERTLVGTYP----QPERV--YSLSLVGNRLVVATAG----RHVNVYDLRNMSQPEQRRES 185 (342)
Q Consensus 123 -------~I~iWd~~~~~~~~~~~~~~~~----~~~~v--~~~s~~~~~~~~~s~d----~~v~iwd~~~~~~~~~~~~~ 185 (342)
+|++||+.++... ..+.... ....+ ..++++++.+++.+.. ..|.+||+.+++.......
T Consensus 222 G~~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~- 298 (723)
T 1xfd_A 222 GSENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED- 298 (723)
T ss_dssp TSCCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-
T ss_pred CCCCCeeEEEEEECCCCcee--EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-
Confidence 7899998754321 1121110 12223 3455566666555433 4699999987643221111
Q ss_pred ccceee----EEEEEeeCCceEEEE--ccCC----eEEEEEeechhhhhc-ccceeeeEEecCCCCceeeeee-EEEEcC
Q 019384 186 SLKYQT----RCVRCYPNGTGYALS--SVEG----RVAMEFFDLSEASQA-KKYAFKCHRKSEAGRDIVYPVN-AIAFHP 253 (342)
Q Consensus 186 ~~~~~~----~~v~~~~~~~~~~~~--s~~~----~~~i~~~d~~~~~~~-~~~~~~~h~~~~~~~~~~~~v~-~v~~sp 253 (342)
.....+ ..++|+|+|+.++.. ..++ ...+++||....... ....+..+. ..+. .++|+|
T Consensus 299 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~---------~~~~~~~~~sp 369 (723)
T 1xfd_A 299 ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD---------WDVTKILAYDE 369 (723)
T ss_dssp ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS---------SCEEEEEEEET
T ss_pred ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC---------eEEEeeeEEcC
Confidence 111111 267899999977754 3555 667888883222110 011111100 0233 368999
Q ss_pred CCCeEEEecCC---CeEEEEeCCCc--eeeeccCC---CCcceEEEEECCCCCEEEEEEe
Q 019384 254 IYGTFATGGCD---GFVNVWDGNNK--KRLYQYSK---YPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 254 ~~~~l~sgs~D---g~I~iWd~~~~--~~~~~~~~---~~~~V~~v~~spdg~~las~s~ 305 (342)
+|+.|+..+.+ ++++||++... .....+.. |...+..++|||||++|+...+
T Consensus 370 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 370 KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred CCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 99998765444 78999987642 23334443 5677899999999999887654
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=2.1e-19 Score=160.38 Aligned_cols=272 Identities=10% Similarity=0.005 Sum_probs=167.0
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCC-CcEEEEECC--Ccee--eeeeecCCceEEEEEeCCCC-eEEEe-cCCcEEEEEec
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWD-KSVRLYDAS--ANVL--RGEFMHGGPVLDCCFHDDSS-GFSAS-ADHTVRRLVFS 89 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~D-gti~vwd~~--~~~~--~~~~~h~~~V~~~~~~~~~~-~~s~s-~D~~i~~w~~~ 89 (342)
.+...+.+++|+|++++|++++.+ ++|++|++. ++.+ .......+.+..++|++++. +++++ .++.+.+|++.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 456678899999999999988887 999999997 4443 23333345888999998877 44555 47889999995
Q ss_pred cC---ceeecccCCcceeEEEEeCCCCEEEEee-CCCcEEEEcCCCCCCcceee--eeecCCCCcE--EEEeccCCeEEE
Q 019384 90 HG---KEDILGKHDAPVRCIEYSYAAGQVITGS-WDKSLKCWDPRGASGQERTL--VGTYPQPERV--YSLSLVGNRLVV 161 (342)
Q Consensus 90 ~~---~~~~~~~h~~~V~~~~~~~~~~~l~sgs-~D~~I~iWd~~~~~~~~~~~--~~~~~~~~~v--~~~s~~~~~~~~ 161 (342)
.+ ...........+.+++|+|+++.|++++ .|+.|++||+++........ .........+ +.++.+++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~ 194 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC 194 (343)
T ss_dssp TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred CCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEE
Confidence 22 2222223334688999999999887776 89999999987522111100 1111111223 345556666655
Q ss_pred EE-cCCeEEEEeCCC--CCCccccccc--cc----ceeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceee
Q 019384 162 AT-AGRHVNVYDLRN--MSQPEQRRES--SL----KYQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFK 231 (342)
Q Consensus 162 ~s-~d~~v~iwd~~~--~~~~~~~~~~--~~----~~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~ 231 (342)
++ .++.|.+||+.. +......... .. ......++++|+++.++++ ..++.+ .+||.......... +.
T Consensus 195 ~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i--~v~d~~~~~~~~~~-~~ 271 (343)
T 1ri6_A 195 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLI--TVFSVSEDGSVLSK-EG 271 (343)
T ss_dssp EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEE--EEEEECTTSCCEEE-EE
T ss_pred EeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEE--EEEEEcCCCCceEE-ee
Confidence 54 778999999954 2111010000 00 1234578899999877654 456655 56887521111111 00
Q ss_pred eEEecCCCCceeeeeeEEEEcCCCCeEEEec-CCCeEEEEe--CCCce--eeeccCCCCcceEEEEECCCCCE
Q 019384 232 CHRKSEAGRDIVYPVNAIAFHPIYGTFATGG-CDGFVNVWD--GNNKK--RLYQYSKYPTSIAALSFSRDGRL 299 (342)
Q Consensus 232 ~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs-~Dg~I~iWd--~~~~~--~~~~~~~~~~~V~~v~~spdg~~ 299 (342)
.... ...+..++|+|++++|++++ .|+.|.+|+ .++++ .+..+... ....+++|.|+.+.
T Consensus 272 -~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 272 -FQPT------ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEGG 336 (343)
T ss_dssp -EEEC------SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC--
T ss_pred -eecC------CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccCC
Confidence 0000 01267899999999887776 689999995 44553 33344332 34567788776553
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=2.1e-20 Score=191.81 Aligned_cols=265 Identities=13% Similarity=0.033 Sum_probs=188.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECC--CceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDAS--ANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~--~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~ 93 (342)
..|...+.+++|+++ .++++++.|++++||++. ++.......|. .+...+|+++++.+..+.++.+.+|+......
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKI 277 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEETTEEEEECTTTCCE
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEeCCEEEEecCCceEe
Confidence 467889999999988 667788889999999864 33333333343 46677899888765555799999999854443
Q ss_pred eeccc-----------CCcceeEEEEe-CCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCC-cEEEEec-cCCeE
Q 019384 94 DILGK-----------HDAPVRCIEYS-YAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPE-RVYSLSL-VGNRL 159 (342)
Q Consensus 94 ~~~~~-----------h~~~V~~~~~~-~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~s~-~~~~~ 159 (342)
..+.. |...+.+++|+ |+++.|++++ ++.|.+|++..+.. . .+.. +.. .+..+.+ +++.+
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~--~-~~~~--~~~~~~~~~~~sdg~~l 351 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV--L-KVPE--PLRIRYVRRGGDTKVAF 351 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE--E-ECSC--CSCEEEEEECSSSEEEE
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce--E-EccC--CCcceEEeeeEcCCCeE
Confidence 33333 45579999999 9999998887 88999999864321 1 1211 222 3444444 55578
Q ss_pred EEEEcCCeEE-EEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCC
Q 019384 160 VVATAGRHVN-VYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEA 238 (342)
Q Consensus 160 ~~~s~d~~v~-iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~ 238 (342)
++++.+..+. +||+...... ... .....+..++++|+++.+++++.++.+ ++||....... ..+..|.
T Consensus 352 ~~~s~~~~l~~~~d~~~~~~~--~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v--~~~d~~tg~~~--~~~~~~~---- 420 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGKAE--KFE-ENLGNVFAMGVDRNGKFAVVANDRFEI--MTVDLETGKPT--VIERSRE---- 420 (1045)
T ss_dssp EEEETTEEEEEEEETTTCCEE--ECC-CCCCSEEEEEECTTSSEEEEEETTSEE--EEEETTTCCEE--EEEECSS----
T ss_pred EEEECCCceEEEEECCCCCce--Eec-CCccceeeeEECCCCCEEEEECCCCeE--EEEECCCCceE--EeccCCC----
Confidence 8888877788 8898765321 111 233456789999999999999888765 56998543211 1111221
Q ss_pred CCceeeeeeEEEEcCCCCeEEEecCCC----------eEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 239 GRDIVYPVNAIAFHPIYGTFATGGCDG----------FVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 239 ~~~~~~~v~~v~~sp~~~~l~sgs~Dg----------~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
..+.+++|+|||++|++++.++ .|++||+.+++ +..+..|...+.+++|+|||++|+.++.
T Consensus 421 -----~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 421 -----AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp -----SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred -----CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 2578899999999998887654 99999999877 6677888888999999999999998876
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=8e-20 Score=187.53 Aligned_cols=276 Identities=9% Similarity=-0.035 Sum_probs=188.0
Q ss_pred CCCCeEEEEEc-CCCCeEEEEeCCCcEEEEECCCceeeeeeecCC-ceEEEEEeCCCC-eEEEecCCcEE-EEEeccCce
Q 019384 18 PSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGG-PVLDCCFHDDSS-GFSASADHTVR-RLVFSHGKE 93 (342)
Q Consensus 18 ~~~~V~~l~fs-~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~-~V~~~~~~~~~~-~~s~s~D~~i~-~w~~~~~~~ 93 (342)
|...|.+++|| |||++|++++ ++.+.+|++.++.......|.+ .+..+.|+ ++. ++.++.+..+. +|+..++..
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA 371 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc
Confidence 34579999999 9999999887 8899999998877666666777 89999999 765 55677766777 778877765
Q ss_pred eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCC-------
Q 019384 94 DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGR------- 166 (342)
Q Consensus 94 ~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~------- 166 (342)
..+.+|...+.+++|+||++.|++++.|+.|++||++++.. ......+......+.++++++.+++++.++
T Consensus 372 ~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~--~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP--TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce--EEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 55558888999999999999999999999999999975432 222223333334566788888888877654
Q ss_pred ---eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhh-------------------
Q 019384 167 ---HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQ------------------- 224 (342)
Q Consensus 167 ---~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~------------------- 224 (342)
+|++||+.++. .. .. .........++|+|+|+.+++.+.++...+ |+......
T Consensus 450 ~~~~i~l~d~~~g~-~~-~l-~~~~~~~~~~~~spdG~~l~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IF-AA-TTENSHDYAPAFDADSKNLYYLSYRSLDPS--PDRVVLNFSFEVVSKPFVIPLIPGSPN 524 (1045)
T ss_dssp CEEEEEEEETTTTE-EE-EC-SCSSSBEEEEEECTTSCEEEEEESCCCCCE--ECSSSSCEECCSCBEEEEEESSTTCCC
T ss_pred CCCeEEEEECCCCc-EE-Ee-eCCCcccCCceEcCCCCEEEEEecccCCcC--cchhccccccccCceeEEEEeCCCCCC
Confidence 89999998753 11 11 122234567889999999888876443221 22110000
Q ss_pred c------------ccceeeeEEec-CCCCceeeeeeEEEEcCCCCeEEE-------------ecCCCeEEEEeCCCceee
Q 019384 225 A------------KKYAFKCHRKS-EAGRDIVYPVNAIAFHPIYGTFAT-------------GGCDGFVNVWDGNNKKRL 278 (342)
Q Consensus 225 ~------------~~~~~~~h~~~-~~~~~~~~~v~~v~~sp~~~~l~s-------------gs~Dg~I~iWd~~~~~~~ 278 (342)
. ..+.+.+.... .....+...+..++++|++.++++ ...+..|++||..+++..
T Consensus 525 ~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~ 604 (1045)
T 1k32_A 525 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT 604 (1045)
T ss_dssp GGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE
T ss_pred ccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE
Confidence 0 00000000000 000011235788999999987775 123557888998877643
Q ss_pred eccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 279 YQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 279 ~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
.+. ..+.+++|||||++|++++..
T Consensus 605 -~l~---~~v~~~~~S~DG~~l~~~~~~ 628 (1045)
T 1k32_A 605 -EVK---NNLTDLRLSADRKTVMVRKDD 628 (1045)
T ss_dssp -EEE---EEEEEEEECTTSCEEEEEETT
T ss_pred -Eee---cCcceEEECCCCCEEEEEcCC
Confidence 222 668999999999999988754
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=9.2e-19 Score=157.34 Aligned_cols=262 Identities=12% Similarity=0.040 Sum_probs=164.9
Q ss_pred CCCcEEEEECC--Cceee--eeeecCCceEEEEEeCCCCeEEEec---CCcEEEEEeccCceee---cccCCcceeEEEE
Q 019384 39 WDKSVRLYDAS--ANVLR--GEFMHGGPVLDCCFHDDSSGFSASA---DHTVRRLVFSHGKEDI---LGKHDAPVRCIEY 108 (342)
Q Consensus 39 ~Dgti~vwd~~--~~~~~--~~~~h~~~V~~~~~~~~~~~~s~s~---D~~i~~w~~~~~~~~~---~~~h~~~V~~~~~ 108 (342)
.++.|.+|+++ ++++. ....+...+..++|++++++++++. ++.|.+|++..+.... +..+...+..++|
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 45678888764 45432 3445677788999998888766655 5789999997765332 2446778899999
Q ss_pred eCCCCEEEEee-CCCcEEEEcCCCCCCcceeeeeecCC------------CCcEEEEeccCCeEEEEEcCCeEEEEeCC-
Q 019384 109 SYAAGQVITGS-WDKSLKCWDPRGASGQERTLVGTYPQ------------PERVYSLSLVGNRLVVATAGRHVNVYDLR- 174 (342)
Q Consensus 109 ~~~~~~l~sgs-~D~~I~iWd~~~~~~~~~~~~~~~~~------------~~~v~~~s~~~~~~~~~s~d~~v~iwd~~- 174 (342)
+|++++|++++ .+++|++||+..... . ..+..... ....+.++.+++.+++...++.|.+||+.
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~-~-~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGA-L-TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSC-E-EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCC-e-eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 99999888777 778999999853211 1 11111111 01124566677745555567889999998
Q ss_pred CCCCccc-ccccccceeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceeeeEEec-CCCCceeeeeeEEEE
Q 019384 175 NMSQPEQ-RRESSLKYQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFKCHRKS-EAGRDIVYPVNAIAF 251 (342)
Q Consensus 175 ~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~-~~~~~~~~~v~~v~~ 251 (342)
++..... ............++++|+++.+++. ..++.+. +|+......... ....... ..+......+..++|
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~--v~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~i~~ 247 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIA--SLKYDTQTGAFT--QLGIVKTIPADYTAHNGAAAIRL 247 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE--EEEEETTTTEEE--EEEEEESSCTTCCSCCEEEEEEE
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEE--EEEecCCCCceE--EeeeeeecCCCCCCCCcceeEEE
Confidence 3321111 0011112245678999999966654 5566654 466542111110 0000000 000001124778999
Q ss_pred cCCCCeE-EEecCCCeEEEEeCCC---ceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 252 HPIYGTF-ATGGCDGFVNVWDGNN---KKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 252 sp~~~~l-~sgs~Dg~I~iWd~~~---~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
+|+|++| +++..+++|.+|++.. .+.+..+..+...+.+++|+|||++|++++..
T Consensus 248 spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 248 SHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp CTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 9999977 5666789999999872 24455666666678999999999999888764
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=1.7e-19 Score=157.14 Aligned_cols=236 Identities=13% Similarity=0.071 Sum_probs=155.5
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC-ceeeeee-ec-CCceEEEEEeCCCCeE-EEe--cCCcEEEEEec-
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA-NVLRGEF-MH-GGPVLDCCFHDDSSGF-SAS--ADHTVRRLVFS- 89 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~-~~~~~~~-~h-~~~V~~~~~~~~~~~~-s~s--~D~~i~~w~~~- 89 (342)
.|...|.+++|+|++++|++++ ++.|++||+.+ +...... .| ...|.+++|+++++.+ +++ .++..++|.++
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 4577899999999999999886 88999999988 7655443 33 3678899999887754 555 33566677664
Q ss_pred -cCceeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEE-cCC
Q 019384 90 -HGKEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVAT-AGR 166 (342)
Q Consensus 90 -~~~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s-~d~ 166 (342)
++....+..+. .+.+++|+|+++.|+ +++.|+.+++|+++...... ..+...........++.+++.+++++ .++
T Consensus 118 ~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 118 TGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp TCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECTTSSEEEEEECTTS
T ss_pred CCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCccccceECCCCCEEEEEecCCC
Confidence 34434444433 488999999999876 78899999999864322221 12222222222344555666677665 488
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccC---------CeEEEEEeechhhhhcccceeeeEEecC
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE---------GRVAMEFFDLSEASQAKKYAFKCHRKSE 237 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~---------~~~~i~~~d~~~~~~~~~~~~~~h~~~~ 237 (342)
.+++|++.......... ......+.++.++|+++.+++++.+ +...+++||...........+..|.
T Consensus 196 ~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~--- 271 (297)
T 2ojh_A 196 QMQIWRVRVDGSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ--- 271 (297)
T ss_dssp SCEEEEEETTSSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST---
T ss_pred CccEEEECCCCCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC---
Confidence 89999876322221111 1223456778899999998888765 3467888998643222222222221
Q ss_pred CCCceeeeeeEEEEcCCCCeEEEecCCC
Q 019384 238 AGRDIVYPVNAIAFHPIYGTFATGGCDG 265 (342)
Q Consensus 238 ~~~~~~~~v~~v~~sp~~~~l~sgs~Dg 265 (342)
..+.+++|+|+++.|++++.|.
T Consensus 272 ------~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 272 ------GTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ------TTSCSCCBCTTSSEEEEEEECC
T ss_pred ------cccccceECCCCCEEEEEEecc
Confidence 1477899999999998877653
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=1.3e-18 Score=155.80 Aligned_cols=276 Identities=9% Similarity=0.048 Sum_probs=166.9
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCC--ceEEEEEeCCCC-eE-EEecCCcEEEEEeccCcee-ecc-
Q 019384 24 NLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGG--PVLDCCFHDDSS-GF-SASADHTVRRLVFSHGKED-ILG- 97 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~--~V~~~~~~~~~~-~~-s~s~D~~i~~w~~~~~~~~-~~~- 97 (342)
.+++++++.++++++.|++|++||+.+++....+.... .+..++|++++. ++ +...++.|.+|+..+++.. .+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678889999999999999999999887666554444 678899998876 43 4456889999999887643 222
Q ss_pred cC-----CcceeEEEEeCCCCEEEEeeCC------------CcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEE
Q 019384 98 KH-----DAPVRCIEYSYAAGQVITGSWD------------KSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLV 160 (342)
Q Consensus 98 ~h-----~~~V~~~~~~~~~~~l~sgs~D------------~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~ 160 (342)
.+ ...+.+++|+|++++|++++.+ +.|.+||++++...................++.+++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 22 3347899999999999988865 899999987532111111111111222334666666 55
Q ss_pred EEEcCCeEEEEeCCCCCCcccccccc--c--------------------ceeeEEEEEeeCCceEEEEccCCeEEEEEee
Q 019384 161 VATAGRHVNVYDLRNMSQPEQRRESS--L--------------------KYQTRCVRCYPNGTGYALSSVEGRVAMEFFD 218 (342)
Q Consensus 161 ~~s~d~~v~iwd~~~~~~~~~~~~~~--~--------------------~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d 218 (342)
++ ++.|.+||+.+++......... . -.....+++.+++....... +....+..+|
T Consensus 163 ~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~ 239 (349)
T 1jmx_B 163 VA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA-DLLYGYLSVD 239 (349)
T ss_dssp EE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC-EEEEEEEEEE
T ss_pred Ec--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc-ccceeEEEEe
Confidence 54 4459999998764321111000 0 00123344444331110000 0111111133
Q ss_pred chhhhhcccceeeeEEecCCCCceeeeeeEEEEcC-CCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCC
Q 019384 219 LSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP-IYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDG 297 (342)
Q Consensus 219 ~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp-~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg 297 (342)
.... ....+.+..+ ...+..++|+| ++++|+++ ++.|++||.++++.+..+.. ...+.+++|+|||
T Consensus 240 ~~~~-~~~~~~~~~~---------~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg 306 (349)
T 1jmx_B 240 LKTG-KTHTQEFADL---------TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKG 306 (349)
T ss_dssp TTTC-CEEEEEEEEC---------SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSS
T ss_pred ccCC-cEEecccccC---------CCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCC
Confidence 3221 1111111110 11367899999 99999888 89999999999887766542 2457899999999
Q ss_pred CEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 298 RLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 298 ~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
++|++++.+. .|.+|+++.
T Consensus 307 ~~l~~~~~~~-----------~v~v~d~~~ 325 (349)
T 1jmx_B 307 DKLYLGGTFN-----------DLAVFNPDT 325 (349)
T ss_dssp SCEEEESBSS-----------EEEEEETTT
T ss_pred CEEEEecCCC-----------eEEEEeccc
Confidence 9888754322 377777654
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=6.2e-18 Score=150.63 Aligned_cols=275 Identities=9% Similarity=-0.017 Sum_probs=163.0
Q ss_pred CCCeEEEEEcCCCCeEEEEeC-CCcEEEEECCCcee-eeeee-cCCceEEEEEeCCCCeEEEecCC----cEEEEEeccC
Q 019384 19 SDGISNLRFSNHSDHLLVSSW-DKSVRLYDASANVL-RGEFM-HGGPVLDCCFHDDSSGFSASADH----TVRRLVFSHG 91 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~-Dgti~vwd~~~~~~-~~~~~-h~~~V~~~~~~~~~~~~s~s~D~----~i~~w~~~~~ 91 (342)
...+ .++|+|++++|++++. +++|.+||..++++ ..... +..+..+++|++++..+.++.+. .|.+|++.++
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 4455 9999999997776665 89999999988765 44443 44444449999888755455444 8999999887
Q ss_pred ceeecccCCcceeEEEEeCCCCEEE-EeeCCCc-EEEEcCCCCCCcceeeeeecC--CCCcEEEEeccCCeEEEE-EcCC
Q 019384 92 KEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKS-LKCWDPRGASGQERTLVGTYP--QPERVYSLSLVGNRLVVA-TAGR 166 (342)
Q Consensus 92 ~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~-I~iWd~~~~~~~~~~~~~~~~--~~~~v~~~s~~~~~~~~~-s~d~ 166 (342)
+......+.....+++|+|++++|+ ++..++. |.+|++............... .....+.++.+++.++++ ..++
T Consensus 119 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 119 KFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp EEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred CeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 7443333345568999999998554 5566688 999998743221100011111 112234555666655544 4678
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV 246 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v 246 (342)
.|.+||+.+++................++++|+++.++++... ...+.+||...........+..+.. ........+
T Consensus 199 ~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~ 275 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTES-TVDVFNFNQLSGTLSFVKSFGHGLL--IDPRPLFGA 275 (331)
T ss_dssp EEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSS-EEEEEEEETTTTEEEEEEEEECCCC--CCCGGGTTC
T ss_pred eEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcC-CCEEEEEECCCCceeeecccccccc--cCCCCcccc
Confidence 9999999876541101111122345678899999977766542 3346779986432211111111100 000111123
Q ss_pred eEEEEcCCCCeEEE-ecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCC
Q 019384 247 NAIAFHPIYGTFAT-GGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGR 298 (342)
Q Consensus 247 ~~v~~sp~~~~l~s-gs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~ 298 (342)
+.++|+|++++|++ +..+++|++||+..... .........-....+.||+.
T Consensus 276 ~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~g~~~~~~~~~~ 327 (331)
T 3u4y_A 276 NQMALNKTETKLFISANISRELKVFTISGKVV-GYVAGIEANGGIAICHPDKH 327 (331)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTSCEE-EECTTCCCBSCEEECCCC--
T ss_pred cceEECCCCCEEEEecCCCCcEEEEEecCCcc-cceecccccCCeEEECCccc
Confidence 56899999998754 55677999999986543 22333322222344455543
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=7.5e-19 Score=160.08 Aligned_cols=285 Identities=12% Similarity=0.055 Sum_probs=175.5
Q ss_pred EEEcCCCCeEEEEeC-CCc--EEEEECCCceeeeee-ecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCcee-eccc
Q 019384 25 LRFSNHSDHLLVSSW-DKS--VRLYDASANVLRGEF-MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKED-ILGK 98 (342)
Q Consensus 25 l~fs~~~~~l~s~s~-Dgt--i~vwd~~~~~~~~~~-~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~-~~~~ 98 (342)
.+|||||++|+.++. |++ |.+||+.+++.+... .+...+..+.|+|+++ ++.++.++.+.+|++.+++.. .+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 899999999998887 774 778888887765544 3444555778998776 457777889999999988754 3344
Q ss_pred CCcceeEEE--EeCCCCEEEE----------------------eeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec
Q 019384 99 HDAPVRCIE--YSYAAGQVIT----------------------GSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL 154 (342)
Q Consensus 99 h~~~V~~~~--~~~~~~~l~s----------------------gs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~ 154 (342)
+...+.... +++++..++. ...+..|.+||+.++.. . .+...........+++
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~--~-~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES--T-VILQENQWLGHPIYRP 197 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE--E-EEEEESSCEEEEEEET
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce--E-EeecCCccccccEECC
Confidence 555454443 4788888763 23456899999876432 2 2222222223345666
Q ss_pred -cCCeEEEEEcCC------eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEcc-CCe--EEEEEeechhhhh
Q 019384 155 -VGNRLVVATAGR------HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSV-EGR--VAMEFFDLSEASQ 224 (342)
Q Consensus 155 -~~~~~~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~-~~~--~~i~~~d~~~~~~ 224 (342)
+++.++.+..+. .|.++|+...... ..........+....|+|+|+.++..+. ++. ..+++||......
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 667777776542 6777887654321 1111111123556789999997765543 222 2478899865432
Q ss_pred cccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEe---------cCCCeEEEEeCCCceeeeccCCCCc---------
Q 019384 225 AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATG---------GCDGFVNVWDGNNKKRLYQYSKYPT--------- 286 (342)
Q Consensus 225 ~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sg---------s~Dg~I~iWd~~~~~~~~~~~~~~~--------- 286 (342)
.....+..+... ......++|+|||+.|+.. ..+..|++||..+++. ..+..+..
T Consensus 277 ~~l~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 349 (388)
T 3pe7_A 277 RQLTSMPACSHL------MSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDR 349 (388)
T ss_dssp EEEEEECCEEEE------EECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBS
T ss_pred EEEEcCCCceee------eecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCccccccccc
Confidence 221122111100 0012234799999988754 4567999999988654 33444444
Q ss_pred --ceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCC
Q 019384 287 --SIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEI 328 (342)
Q Consensus 287 --~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~ 328 (342)
.+.+++|||||++|+.++..+ ....|.+.++.+.
T Consensus 350 ~~~~~~~~~spDg~~l~~~s~~~--------g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 350 QVTHPHPSFTPDDKQILFTSDVH--------GKPALYLATLPES 385 (388)
T ss_dssp STTCCCCEECTTSSEEEEEECTT--------SSCEEEEEECCGG
T ss_pred ccCCCCccCCCCCCEEEEEecCC--------CceeEEEEECChh
Confidence 578899999999998877432 1234666666543
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=4.3e-19 Score=157.98 Aligned_cols=240 Identities=10% Similarity=-0.027 Sum_probs=157.8
Q ss_pred CeEEEEEcCCCCeE-EEEeCCCcEEEEECCCceeeeeeecCC------ceEEEEEeCCCCe-EEEe------------cC
Q 019384 21 GISNLRFSNHSDHL-LVSSWDKSVRLYDASANVLRGEFMHGG------PVLDCCFHDDSSG-FSAS------------AD 80 (342)
Q Consensus 21 ~V~~l~fs~~~~~l-~s~s~Dgti~vwd~~~~~~~~~~~h~~------~V~~~~~~~~~~~-~s~s------------~D 80 (342)
.+..++|+|+++++ ++++.++.|.+||+.+++....+.... .+.+++|++++.. ++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47899999999876 556678999999998877655443322 6778999987754 4554 57
Q ss_pred CcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEE
Q 019384 81 HTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLV 160 (342)
Q Consensus 81 ~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~ 160 (342)
+.|.+|+..+++..........+.+++|+|++++|+++ ++.|.+||+++... ...+....... ...++.++..++
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~--~~~~~~~~~~~-~~~~s~dg~~l~ 189 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL--VEDKPIQSWEA-ETYAQPDVLAVW 189 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE--EEEECSTTTTT-TTBCCCBCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcE--eeeeeccccCC-CceeCCCccEEe
Confidence 89999999877643222234567889999999988777 68999999875432 11111111011 113445544333
Q ss_pred EEEcC-C-----------------------eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEE
Q 019384 161 VATAG-R-----------------------HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEF 216 (342)
Q Consensus 161 ~~s~d-~-----------------------~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~ 216 (342)
..... + .|.+||+.+.+.. ............+++++|+++.++++ ++. +++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~--v~~ 264 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNV--LES 264 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESE--EEE
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCe--EEE
Confidence 22211 1 4789999876432 11111122345678999999988877 444 567
Q ss_pred eechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC
Q 019384 217 FDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS 282 (342)
Q Consensus 217 ~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~ 282 (342)
||......... +..+ ..+.+++|+|++++|++++.|+.|++||.++++.+..+.
T Consensus 265 ~d~~~~~~~~~--~~~~----------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 265 FDLEKNASIKR--VPLP----------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EETTTTEEEEE--EECS----------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred EECCCCcCcce--ecCC----------CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 99854322111 1110 136789999999999989999999999999887776654
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=3.7e-17 Score=147.73 Aligned_cols=266 Identities=9% Similarity=0.013 Sum_probs=161.8
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCC----CcEEEEECCC--ceeee--ee-ecCCceEEEEEeCCCCeEEEe-cCCcEEEEE
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWD----KSVRLYDASA--NVLRG--EF-MHGGPVLDCCFHDDSSGFSAS-ADHTVRRLV 87 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~D----gti~vwd~~~--~~~~~--~~-~h~~~V~~~~~~~~~~~~s~s-~D~~i~~w~ 87 (342)
+...+..++|+||+++|++++.+ +.|++|++.. +.+.. .. .+...+..+++ +++.+++++ .++.+.+|+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEE
Confidence 45677889999999999999886 8999999854 44322 22 24456677777 555566555 578899999
Q ss_pred eccCce-eec--------------ccCCcceeEEEEeCCCCEEEE-eeCCCcEEEEcCCCCCC----c-c-e----eeee
Q 019384 88 FSHGKE-DIL--------------GKHDAPVRCIEYSYAAGQVIT-GSWDKSLKCWDPRGASG----Q-E-R----TLVG 141 (342)
Q Consensus 88 ~~~~~~-~~~--------------~~h~~~V~~~~~~~~~~~l~s-gs~D~~I~iWd~~~~~~----~-~-~----~~~~ 141 (342)
+..... ..+ ..+...+.+++|+|++++|+. +..++.|++|++..... . . . ....
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 875431 111 112334688999999986654 45588999998764332 1 1 0 0111
Q ss_pred e-cCCCCcEEEEeccCCeEEEEE-cCCeEEEEeCCCCCCccccccccc---ceeeEEEEEeeCCceEEEEccC--CeEEE
Q 019384 142 T-YPQPERVYSLSLVGNRLVVAT-AGRHVNVYDLRNMSQPEQRRESSL---KYQTRCVRCYPNGTGYALSSVE--GRVAM 214 (342)
Q Consensus 142 ~-~~~~~~v~~~s~~~~~~~~~s-~d~~v~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~s~~--~~~~i 214 (342)
. .......+.++.+++.++++. .++.|.+||+.++........... ......++++|+++.++++..+ +.+
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i-- 284 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV-- 284 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE--
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE--
Confidence 1 111122345666677777666 578999999975422111100000 1124588899999988766554 554
Q ss_pred EEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEec-CCCeEEEE--eCCCceeeecc-CCCCcceEE
Q 019384 215 EFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGG-CDGFVNVW--DGNNKKRLYQY-SKYPTSIAA 290 (342)
Q Consensus 215 ~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs-~Dg~I~iW--d~~~~~~~~~~-~~~~~~V~~ 290 (342)
.+|++...... ......... + ..+..++|+|+|++|++++ .++.|.+| |.++++..... ..+...+.|
T Consensus 285 ~v~~~~~~~g~--~~~~~~~~~--g----~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~ 356 (361)
T 3scy_A 285 AIFKVDETNGT--LTKVGYQLT--G----IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVC 356 (361)
T ss_dssp EEEEECTTTCC--EEEEEEEEC--S----SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEE
T ss_pred EEEEEcCCCCc--EEEeeEecC--C----CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeE
Confidence 55776421111 111111110 0 1367899999999887776 67899996 44566554332 223456888
Q ss_pred EEEC
Q 019384 291 LSFS 294 (342)
Q Consensus 291 v~~s 294 (342)
++|.
T Consensus 357 v~~~ 360 (361)
T 3scy_A 357 LKFV 360 (361)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8885
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=6.1e-18 Score=167.51 Aligned_cols=269 Identities=10% Similarity=-0.001 Sum_probs=171.7
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee-ecCCc-----eEEEEEeCCCCeE-EEecC---------Cc
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF-MHGGP-----VLDCCFHDDSSGF-SASAD---------HT 82 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~-~h~~~-----V~~~~~~~~~~~~-s~s~D---------~~ 82 (342)
.....+++|+||+++|+++ |++|++||+.++.....+ .|... ..++.|+|+++.+ .++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3456799999999988886 999999999887654443 33322 2447889888754 55554 45
Q ss_pred EEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC-----------------C
Q 019384 83 VRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYP-----------------Q 145 (342)
Q Consensus 83 i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~-----------------~ 145 (342)
+.+||+.+++...+..|...+...+|+|||+.|+.+ .|+.|.+||+.++... +....... .
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSY-RITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCE-ECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceE-EEcCCCCccceecCcccccccchhcC
Confidence 669999998877777888889999999999999887 4789999998754321 11111100 0
Q ss_pred CCcEEEEeccCCeEEEEEcCCe-EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechh---
Q 019384 146 PERVYSLSLVGNRLVVATAGRH-VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSE--- 221 (342)
Q Consensus 146 ~~~v~~~s~~~~~~~~~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~--- 221 (342)
......++++++.|+.++.|.+ +++|++....... ........+.+.+.|. .+..+.+++||+..
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~-----~~~~~~~~~~yp~~G~------~~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-----LQYPKTVRVPYPKAGA------VNPTVKFFVVNTDSLSS 240 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-----CSSCEEEEEECCBTTS------CCCEEEEEEEETTSCCS
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC-----CCCCcceeecCCCCcC------cCCeeEEEEEECCCCCC
Confidence 1122568888889998877655 8888874322110 0111233444444442 35566788899865
Q ss_pred hhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEe----cCCCeEEEEeCCCce----eee--cc--CCCCcceE
Q 019384 222 ASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATG----GCDGFVNVWDGNNKK----RLY--QY--SKYPTSIA 289 (342)
Q Consensus 222 ~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sg----s~Dg~I~iWd~~~~~----~~~--~~--~~~~~~V~ 289 (342)
........+..... ...+..-+..++|+|||+.++.. +.+..|++||..+++ +.. ++ .+|...|.
T Consensus 241 ~~~~~~~~l~~~~~---~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~ 317 (740)
T 4a5s_A 241 VTNATSIQITAPAS---MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVG 317 (740)
T ss_dssp SSCCCEEEECCCHH---HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSS
T ss_pred CCcceEEEecCCcc---CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEc
Confidence 31101111111000 00012347889999999966654 334589999998876 332 22 45665554
Q ss_pred -----EEEECCCCCEEE-EEEe
Q 019384 290 -----ALSFSRDGRLLA-VASS 305 (342)
Q Consensus 290 -----~v~~spdg~~la-s~s~ 305 (342)
.++|||||+.|+ ..+.
T Consensus 318 ~~~~~~p~fspDG~~l~~~~s~ 339 (740)
T 4a5s_A 318 RFRPSEPHFTLDGNSFYKIISN 339 (740)
T ss_dssp SSSCCCCEECTTSSEEEEEEEC
T ss_pred cCcCCCceEcCCCCEEEEEEEc
Confidence 789999999887 5553
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=4.2e-18 Score=167.95 Aligned_cols=267 Identities=12% Similarity=0.005 Sum_probs=174.8
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCC----ceEEEEEeCCCCeE-EEec---------CCcEEEEEe
Q 019384 23 SNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGG----PVLDCCFHDDSSGF-SASA---------DHTVRRLVF 88 (342)
Q Consensus 23 ~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~----~V~~~~~~~~~~~~-s~s~---------D~~i~~w~~ 88 (342)
.+++|+|++++++ .+.|++|++||+.+++......+.. .+.+++|+|+++.+ +++. |+.+++|++
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 4789999995544 5579999999999887666554433 38999999888754 5554 689999999
Q ss_pred ccCce---eecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCC-----------------CCc
Q 019384 89 SHGKE---DILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQ-----------------PER 148 (342)
Q Consensus 89 ~~~~~---~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~-----------------~~~ 148 (342)
.+++. ..+ ...+.+++|+|||+.|+.++ |+.|++||+.++... +........ ...
T Consensus 98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~-~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 SNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPF-QITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCE-ECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcE-EEecCCCcCCeEcccccceeeeecccCcc
Confidence 88775 333 35688999999999999885 789999998754321 111011000 012
Q ss_pred EEEEeccCCeEEEEEcCC----------------------------------eEEEEeCCCCCCc-cccc-----ccccc
Q 019384 149 VYSLSLVGNRLVVATAGR----------------------------------HVNVYDLRNMSQP-EQRR-----ESSLK 188 (342)
Q Consensus 149 v~~~s~~~~~~~~~s~d~----------------------------------~v~iwd~~~~~~~-~~~~-----~~~~~ 188 (342)
...++++++.|++++.|. +|++||+.++... .... .....
T Consensus 173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 457888888999887652 7889999765321 0000 01123
Q ss_pred eeeEEEEEeeCCceEEEEc--cCCeEEEEEee----chhhhhcccce--eeeEEecCCCCceeeeee-----EEEEcCCC
Q 019384 189 YQTRCVRCYPNGTGYALSS--VEGRVAMEFFD----LSEASQAKKYA--FKCHRKSEAGRDIVYPVN-----AIAFHPIY 255 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~s--~~~~~~i~~~d----~~~~~~~~~~~--~~~h~~~~~~~~~~~~v~-----~v~~sp~~ 255 (342)
..+..++|+|+++.+++.. .++...|++|| ........... ...|.. .+. .++|+|||
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTG---------WAGGFFVSTPVFSYDA 323 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSS---------CSSSSSCCCCEECTTS
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCc---------eEccccCCccEECCCC
Confidence 4567889999977665533 34556788899 54332211110 011211 233 67899999
Q ss_pred CeEEE--ecCCC--eEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 256 GTFAT--GGCDG--FVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 256 ~~l~s--gs~Dg--~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
+.|+. +..+| .|++||..+++ ...+..+...|..+.++ |++.|+..+..
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred CeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 96543 54555 57777877655 45566666678888888 88887776644
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=9.2e-18 Score=150.79 Aligned_cols=247 Identities=9% Similarity=0.065 Sum_probs=153.0
Q ss_pred CCCCeEEEEEcCCCCeEEEEeC---CCcEEEEECCCcee--eee-eecCCceEEEEEeCCCC-eEEEe-cCCcEEEEEec
Q 019384 18 PSDGISNLRFSNHSDHLLVSSW---DKSVRLYDASANVL--RGE-FMHGGPVLDCCFHDDSS-GFSAS-ADHTVRRLVFS 89 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~---Dgti~vwd~~~~~~--~~~-~~h~~~V~~~~~~~~~~-~~s~s-~D~~i~~w~~~ 89 (342)
+...+..++|+|||+ |++++. ++.|++||+.++.. ... ..+...+..++|+++++ +++++ .++.+++|++.
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 345677899999999 555544 69999999976653 222 45777889999998877 55666 67899999996
Q ss_pred c-Cceee---cc--c-------CCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceee--eeecCC-CCcEEEEe
Q 019384 90 H-GKEDI---LG--K-------HDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTL--VGTYPQ-PERVYSLS 153 (342)
Q Consensus 90 ~-~~~~~---~~--~-------h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~--~~~~~~-~~~v~~~s 153 (342)
. +.... +. + +...+.+++|+|+++.+++...++.|++||+... +..... ...... ....+.++
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~-g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA-GQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT-SCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC-CcEEEeeeEEcCCCCCCceEEEC
Confidence 3 22211 11 1 2235889999999996677777899999998732 211111 111111 11234566
Q ss_pred ccCCeEEE-EEcCCeEEEEeCCC--CCCcccccccccc------eeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhh
Q 019384 154 LVGNRLVV-ATAGRHVNVYDLRN--MSQPEQRRESSLK------YQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEAS 223 (342)
Q Consensus 154 ~~~~~~~~-~s~d~~v~iwd~~~--~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~ 223 (342)
.+++.+++ ...++.|.+|++.. +............ .....++++|+|+.++++ ..++.+ .+|++....
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v--~v~~~~~~g 273 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTL--AVFAVTADG 273 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEE--EEEEECGGG
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEE--EEEEECCCC
Confidence 67775555 45678999999874 2111000000011 236678999999977554 446655 457774321
Q ss_pred hcc-cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecC-CCeEEEE--eCCCcee
Q 019384 224 QAK-KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC-DGFVNVW--DGNNKKR 277 (342)
Q Consensus 224 ~~~-~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~-Dg~I~iW--d~~~~~~ 277 (342)
... ...+..+ ...+..++|+|+|++|++++. ++.|.+| |.++++.
T Consensus 274 ~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 274 HLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp CEEEEEEEECS---------SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred cEEEeEEEecC---------CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 111 1111111 013678999999998877765 5899999 4455543
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=3.4e-18 Score=158.92 Aligned_cols=199 Identities=13% Similarity=0.063 Sum_probs=137.3
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCC-----------cee-----eeeeecCCceEEEEEeCCCCe-E----E
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA-----------NVL-----RGEFMHGGPVLDCCFHDDSSG-F----S 76 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~-----------~~~-----~~~~~h~~~V~~~~~~~~~~~-~----s 76 (342)
+...++.+++++++.+|++++.|+ ++||+... ... .....+.+.|.+++|++++.. + +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 455789999999999999999998 99988521 011 122346678999999987765 4 5
Q ss_pred EecCCcEEEEEeccC--------c----eeecccCCcceeEEEEeCC-CCEEEEeeCCCcEEEEcCCCCCCcceeeeeec
Q 019384 77 ASADHTVRRLVFSHG--------K----EDILGKHDAPVRCIEYSYA-AGQVITGSWDKSLKCWDPRGASGQERTLVGTY 143 (342)
Q Consensus 77 ~s~D~~i~~w~~~~~--------~----~~~~~~h~~~V~~~~~~~~-~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~ 143 (342)
++.|+.|++||+.+. + ...+.+|...|.+++|+|+ +.+|++++.|++|++||+++... .....
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~----~~~~~ 189 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK----VCATL 189 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE----EEEEE
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc----eeecc
Confidence 678999999998764 1 2345679999999999997 78999999999999999975421 11111
Q ss_pred CCCCcEE--EEeccCCeEEEEEcCCeEEEEeCCCCCCccccccc-----ccceeeEEEEEeeCCceEEEEc-cCCeE---
Q 019384 144 PQPERVY--SLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRES-----SLKYQTRCVRCYPNGTGYALSS-VEGRV--- 212 (342)
Q Consensus 144 ~~~~~v~--~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~s-~~~~~--- 212 (342)
.+...+. +++.+++.+++++.|++|++||++ +........+ .....+.++.|++++..+++.+ .++++
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 2223344 455567799999999999999998 2211111100 1123678889999877664433 33221
Q ss_pred -EEEEeechhh
Q 019384 213 -AMEFFDLSEA 222 (342)
Q Consensus 213 -~i~~~d~~~~ 222 (342)
.+++|++...
T Consensus 269 ~~v~i~~l~~~ 279 (434)
T 2oit_A 269 PDVVMALLPKK 279 (434)
T ss_dssp CEEEEEECCCT
T ss_pred CceEEEEeccC
Confidence 2567887543
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=6.4e-18 Score=166.65 Aligned_cols=272 Identities=11% Similarity=0.024 Sum_probs=169.0
Q ss_pred CeEEEEEcCCCCeEEEEeC---------CCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccC
Q 019384 21 GISNLRFSNHSDHLLVSSW---------DKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHG 91 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~---------Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~ 91 (342)
.|.+++|||||++||+++. |++|++||+.+++........+.+..++|+|+++.+..+.|+.|++|++.++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g 140 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGD 140 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTS
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCC
Confidence 4899999999999998876 7999999999887621111235688999999988766667899999999877
Q ss_pred ceeec--ccCCcce-----------------eEEEEeCCCCEEEEeeCCC------------------------------
Q 019384 92 KEDIL--GKHDAPV-----------------RCIEYSYAAGQVITGSWDK------------------------------ 122 (342)
Q Consensus 92 ~~~~~--~~h~~~V-----------------~~~~~~~~~~~l~sgs~D~------------------------------ 122 (342)
....+ .++...| .+++|+|||+.|++++.|.
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 64332 2333322 4899999999999988663
Q ss_pred ----cEEEEcCCCCCCcceeeeee----cCCCCcEEE--EeccCCeEEEEEcCC----eEEEEe----CCCCCCccccc-
Q 019384 123 ----SLKCWDPRGASGQERTLVGT----YPQPERVYS--LSLVGNRLVVATAGR----HVNVYD----LRNMSQPEQRR- 183 (342)
Q Consensus 123 ----~I~iWd~~~~~~~~~~~~~~----~~~~~~v~~--~s~~~~~~~~~s~d~----~v~iwd----~~~~~~~~~~~- 183 (342)
+|++||+.++.......+.. ..+...+.. +++++..+++....+ .|.+|| +.+++......
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~ 300 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEH 300 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEE
T ss_pred CCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEec
Confidence 78899986532100001100 012223334 455543444433322 488899 76543221110
Q ss_pred -ccccceeeE-----EEEEeeCCceEEE--EccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCC
Q 019384 184 -ESSLKYQTR-----CVRCYPNGTGYAL--SSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIY 255 (342)
Q Consensus 184 -~~~~~~~~~-----~v~~~~~~~~~~~--~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~ 255 (342)
.......+. .+.|+|+|+.++. ...++...|++||..... . ..+..+. ..+..+.++ ++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~--~~lt~~~---------~~v~~~~~~-d~ 367 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-A--IQITSGK---------WEAINIFRV-TQ 367 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-C--EECSCSS---------SCEEEEEEE-CS
T ss_pred ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-e--EecccCc---------eEEEEEEEE-eC
Confidence 011111222 5779999986654 456777788889875432 1 1111110 125566666 77
Q ss_pred CeEEEecC-----CCeEEEEeCCC--c----eeee-ccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 256 GTFATGGC-----DGFVNVWDGNN--K----KRLY-QYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 256 ~~l~sgs~-----Dg~I~iWd~~~--~----~~~~-~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
+.|+..+. +++++||.+.. + +++. .+.+|...+..++|||||++|+..++
T Consensus 368 ~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s 429 (719)
T 1z68_A 368 DSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCY 429 (719)
T ss_dssp SEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEEC
T ss_pred CEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcC
Confidence 76655544 48899997653 3 2221 13336677899999999998886543
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=1.5e-16 Score=143.72 Aligned_cols=285 Identities=10% Similarity=0.042 Sum_probs=170.0
Q ss_pred cCCCCeEEEEe----CCCcEEEEECC--Cceee--eeeecCCceEEEEEeCCCC-eEEEecC----CcEEEEEeccC--c
Q 019384 28 SNHSDHLLVSS----WDKSVRLYDAS--ANVLR--GEFMHGGPVLDCCFHDDSS-GFSASAD----HTVRRLVFSHG--K 92 (342)
Q Consensus 28 s~~~~~l~s~s----~Dgti~vwd~~--~~~~~--~~~~h~~~V~~~~~~~~~~-~~s~s~D----~~i~~w~~~~~--~ 92 (342)
.++..+++.|+ .++.|.+|++. ++++. ... +...+..++|+++++ +++++.+ +.+.+|++... .
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT 88 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc
Confidence 33445666664 45789999873 44432 233 677788899998877 5566665 78999998763 3
Q ss_pred eee---cccCCcceeEEEEeCCCCEEEEee-CCCcEEEEcCCCCCCccee-eeeecCC-----------CCcEEEEeccC
Q 019384 93 EDI---LGKHDAPVRCIEYSYAAGQVITGS-WDKSLKCWDPRGASGQERT-LVGTYPQ-----------PERVYSLSLVG 156 (342)
Q Consensus 93 ~~~---~~~h~~~V~~~~~~~~~~~l~sgs-~D~~I~iWd~~~~~~~~~~-~~~~~~~-----------~~~v~~~s~~~ 156 (342)
... ...+......+++ +++.|++++ .+++|.+|++......... ....+.. ....+.+++++
T Consensus 89 ~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 222 2234556777777 777776655 6789999998643211100 0001111 01224566777
Q ss_pred CeEEEEE-cCCeEEEEeCCCCCC------cc-----cccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhh
Q 019384 157 NRLVVAT-AGRHVNVYDLRNMSQ------PE-----QRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEAS 223 (342)
Q Consensus 157 ~~~~~~s-~d~~v~iwd~~~~~~------~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~ 223 (342)
+.++++. .++.|.+|++..... .. .............++++|+++.++++. .++.+ .+|+.....
T Consensus 167 ~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v--~v~~~~~g~ 244 (361)
T 3scy_A 167 KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV--IAFRYADGM 244 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE--EEEEEETTE
T ss_pred CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE--EEEEecCCc
Confidence 7665554 478999999875431 10 011112223456789999999776665 46655 568775321
Q ss_pred hcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecC--CCeEEEEeCC--Cce--eeeccCCCCcceEEEEECCCC
Q 019384 224 QAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC--DGFVNVWDGN--NKK--RLYQYSKYPTSIAALSFSRDG 297 (342)
Q Consensus 224 ~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~--Dg~I~iWd~~--~~~--~~~~~~~~~~~V~~v~~spdg 297 (342)
......+.... ........++|+|||++|+++.. +++|.+|++. +++ .+..+.. ...+.+++|+|||
T Consensus 245 ~~~~~~~~~~~------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg 317 (361)
T 3scy_A 245 LDEIQTVAADT------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG 317 (361)
T ss_dssp EEEEEEEESCS------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS
T ss_pred eEEeEEEecCC------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC
Confidence 11111111100 01113568999999998865554 5899999985 333 3444443 4567899999999
Q ss_pred CEEEEEEeccccCCCCCCCCCcEEEEEcc--CCccccCC
Q 019384 298 RLLAVASSYTFEEGDKPHEPDAIFVRSVN--EIEVKPKP 334 (342)
Q Consensus 298 ~~las~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 334 (342)
++|++++... +.|.+|.++ .+..+...
T Consensus 318 ~~l~~~~~~~----------~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 318 KYLLVACRDT----------NVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CEEEEEETTT----------TEEEEEEECTTTCCEEECS
T ss_pred CEEEEEECCC----------CCEEEEEEECCCCcEeecc
Confidence 9999887532 147776554 34444443
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=7.2e-18 Score=156.66 Aligned_cols=156 Identities=17% Similarity=0.155 Sum_probs=116.3
Q ss_pred CCCCeEEEEEcCCCCeEE----EEeCCCcEEEEECCCc--------e----eeeeeecCCceEEEEEeCC-CC-eEEEec
Q 019384 18 PSDGISNLRFSNHSDHLL----VSSWDKSVRLYDASAN--------V----LRGEFMHGGPVLDCCFHDD-SS-GFSASA 79 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~----s~s~Dgti~vwd~~~~--------~----~~~~~~h~~~V~~~~~~~~-~~-~~s~s~ 79 (342)
+...|++++|+|++++|| +|+.|++|+|||+.+. + +....+|.+.|.+++|+++ +. +++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 456799999999999999 8999999999998543 1 2223458999999999975 44 568999
Q ss_pred CCcEEEEEeccCcee-ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeec-----CCCCcEEEEe
Q 019384 80 DHTVRRLVFSHGKED-ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTY-----PQPERVYSLS 153 (342)
Q Consensus 80 D~~i~~w~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~-----~~~~~v~~~s 153 (342)
|++|++||+.++... ...+|...|.+++|+|++++|++|+.|++|++||++ ... ...+..+ .+...+.++.
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~--~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE--KKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE--EEEECCCTTCCTTSCEEEEEEE
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc--cccccCCcccCCCCceeEEEEE
Confidence 999999999887532 345789999999999999999999999999999987 221 1112111 1123677777
Q ss_pred ccCC-eEEE--EEcCC------eEEEEeCCCC
Q 019384 154 LVGN-RLVV--ATAGR------HVNVYDLRNM 176 (342)
Q Consensus 154 ~~~~-~~~~--~s~d~------~v~iwd~~~~ 176 (342)
++++ .++. .+.+| .+++||+++.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 7655 2332 33333 3899999864
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=2.5e-17 Score=158.57 Aligned_cols=226 Identities=13% Similarity=0.073 Sum_probs=155.3
Q ss_pred cCCceEEEEEeCCCC-eEEEec-CCcEEEEEeccCceeecccCC-cceeEEEEeCCCCEEEEeeC---CCcEEEEcCCC-
Q 019384 59 HGGPVLDCCFHDDSS-GFSASA-DHTVRRLVFSHGKEDILGKHD-APVRCIEYSYAAGQVITGSW---DKSLKCWDPRG- 131 (342)
Q Consensus 59 h~~~V~~~~~~~~~~-~~s~s~-D~~i~~w~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~sgs~---D~~I~iWd~~~- 131 (342)
+..+|++++|++|++ +++++. |+++++|+++++....+..|. ..|.+++|+|| +.+++++. +...++|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 356899999997766 456665 999999999777766666655 68999999998 67777765 55567765432
Q ss_pred -CCCcceeeeeecCCCCcEEEEeccCCeE-EEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccC
Q 019384 132 -ASGQERTLVGTYPQPERVYSLSLVGNRL-VVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE 209 (342)
Q Consensus 132 -~~~~~~~~~~~~~~~~~v~~~s~~~~~~-~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~ 209 (342)
.... . .+... ....+.+++++++.+ ++...++.+.+||+.+++.. .... ....+++++|+|+.++.++.+
T Consensus 99 ~~g~~-~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~-~l~~----~~~~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 99 RPGEE-Q-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR-ELAR----LPGFGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp STTCC-E-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE-EEEE----ESSCEEEEEEETTEEEEEEEE
T ss_pred CCCcc-c-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE-Eeec----CCCceEEECCCCCEEEEEEEc
Confidence 2221 1 12111 123466788888753 33344455669999775321 1111 112678899999999877654
Q ss_pred --CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCC--eEEEEeCCCceeeeccCCCC
Q 019384 210 --GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDG--FVNVWDGNNKKRLYQYSKYP 285 (342)
Q Consensus 210 --~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg--~I~iWd~~~~~~~~~~~~~~ 285 (342)
+...|++||..+.... .+..|. ..+..++|||||++|+++..|+ +|++||.++++.. .+.+|.
T Consensus 171 ~~~~~~i~~~d~~~g~~~---~l~~~~---------~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~ 237 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR---VFDSGE---------GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS 237 (582)
T ss_dssp ETTEEEEEEEETTTCCCE---EECCSS---------CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC
T ss_pred CCCCeEEEEEcCCCCCce---EeecCC---------CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC
Confidence 3356788997543221 222221 2578899999999999888898 8999999988776 777888
Q ss_pred cceEEEE--------ECCCCCEEEEEEec
Q 019384 286 TSIAALS--------FSRDGRLLAVASSY 306 (342)
Q Consensus 286 ~~V~~v~--------~spdg~~las~s~~ 306 (342)
..+..++ |||||+++++++.+
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 7788788 99999877777654
No 161
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=4.9e-16 Score=151.69 Aligned_cols=277 Identities=10% Similarity=-0.065 Sum_probs=174.2
Q ss_pred CCCCCCeEEEEEcCCCCeEEEE--eCCCcEEEEEC-CCceeeeeeecCCceE---------EEEEe--CCCCe-EEEecC
Q 019384 16 NPPSDGISNLRFSNHSDHLLVS--SWDKSVRLYDA-SANVLRGEFMHGGPVL---------DCCFH--DDSSG-FSASAD 80 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~--s~Dgti~vwd~-~~~~~~~~~~h~~~V~---------~~~~~--~~~~~-~s~s~D 80 (342)
..|...|.+++|+++.-.+++. +.|++.+||.. .++..+....|...+. ...|+ |+++. +..+.+
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 3577899999999887777777 66899999995 3444555555665555 56565 77766 655555
Q ss_pred CcEEEEEecc-----Cceeeccc-----CCcceeEEEEeCCCCEEEEeeCC----------CcEEEEcCCCCC----Ccc
Q 019384 81 HTVRRLVFSH-----GKEDILGK-----HDAPVRCIEYSYAAGQVITGSWD----------KSLKCWDPRGAS----GQE 136 (342)
Q Consensus 81 ~~i~~w~~~~-----~~~~~~~~-----h~~~V~~~~~~~~~~~l~sgs~D----------~~I~iWd~~~~~----~~~ 136 (342)
...++|.++. +....+.. |...+.+++|+|||+.|+.++.| ..|.+||+.+.. +..
T Consensus 100 ~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV 179 (662)
T ss_dssp TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS
T ss_pred CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce
Confidence 4555555543 34444544 67789999999999999988877 589999987510 111
Q ss_pred eeeee-ecCCCCcEEEEeccCCeEEEEEcCC--------eEEEEeCC-CCCC-cccccccccceeeEEEEEeeCCceEEE
Q 019384 137 RTLVG-TYPQPERVYSLSLVGNRLVVATAGR--------HVNVYDLR-NMSQ-PEQRRESSLKYQTRCVRCYPNGTGYAL 205 (342)
Q Consensus 137 ~~~~~-~~~~~~~v~~~s~~~~~~~~~s~d~--------~v~iwd~~-~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~ 205 (342)
. .+. ..........++++++.|+.++.++ +|.+||+. ++.. ...............+.|+|+|+.+++
T Consensus 180 ~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 180 R-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp E-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEE
T ss_pred e-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEE
Confidence 1 121 1111111235777888888877553 79999998 4411 111111112235677889999997777
Q ss_pred EccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEE--eCCCceeeeccCC
Q 019384 206 SSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVW--DGNNKKRLYQYSK 283 (342)
Q Consensus 206 ~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iW--d~~~~~~~~~~~~ 283 (342)
+..++...|+.||......... ...+.... ...-...+..++|+|++.++++++. ++++|| |..+++ +..+..
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l--~~~~~~~~-~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~ 333 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQL--CRREEEFA-GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG 333 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEES--SCCSSBSS-CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS
T ss_pred ECCCCCeEEEEEECCCCceeec--cccccccc-CccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC
Confidence 7777777788888643221111 11111100 0000001457899999999999998 999999 555554 667777
Q ss_pred CCcceEEEEECCCCCE
Q 019384 284 YPTSIAALSFSRDGRL 299 (342)
Q Consensus 284 ~~~~V~~v~~spdg~~ 299 (342)
+...+..+. ++|+..
T Consensus 334 ~~~~~~~~~-s~~~~~ 348 (662)
T 3azo_A 334 PWTEWAATL-TVSGTR 348 (662)
T ss_dssp SCCEEEEEE-EEETTE
T ss_pred CCCeEEEEE-ecCCCE
Confidence 777787771 445543
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=3e-16 Score=142.91 Aligned_cols=267 Identities=10% Similarity=0.017 Sum_probs=162.5
Q ss_pred CeEEEEEcCCCCeEEEEeCC---CcEEEEECCCceeeeeeecCCceE-EEEEeCCCCe-EEEecCCcEEEEEeccCceee
Q 019384 21 GISNLRFSNHSDHLLVSSWD---KSVRLYDASANVLRGEFMHGGPVL-DCCFHDDSSG-FSASADHTVRRLVFSHGKEDI 95 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~D---gti~vwd~~~~~~~~~~~h~~~V~-~~~~~~~~~~-~s~s~D~~i~~w~~~~~~~~~ 95 (342)
.+.+++|||||++|+..+.+ ..|.+||+.+++......+...+. .+.|+|+++. +.++.++.+.+|++.+++...
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 37889999999998876543 468888998877655444444433 3788988765 477788889999998876443
Q ss_pred c-ccCCcceeE-------------------EEEeCCCCEEEEe-----eCCCcEEEEcCCCCCCcceeeeeecCCCCcEE
Q 019384 96 L-GKHDAPVRC-------------------IEYSYAAGQVITG-----SWDKSLKCWDPRGASGQERTLVGTYPQPERVY 150 (342)
Q Consensus 96 ~-~~h~~~V~~-------------------~~~~~~~~~l~sg-----s~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~ 150 (342)
+ ..+...... ++|+|+++.++.. ..+..|.+||+.++.. .. +..........
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~-~~~~~~~~~~~ 193 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL--EV-IHQDTAWLGHP 193 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE--EE-EEEESSCEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE--Ee-eccCCcccccc
Confidence 3 323322212 3456666665543 4566899999875432 12 22222222233
Q ss_pred EEec-cCCeEEEEEcC------CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccC-Ce--EEEEEeech
Q 019384 151 SLSL-VGNRLVVATAG------RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE-GR--VAMEFFDLS 220 (342)
Q Consensus 151 ~~s~-~~~~~~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~-~~--~~i~~~d~~ 220 (342)
.++. ++..++.++.+ ..|.+||+...... ..........+..+.++|+++.++..+.+ +. ..+++||..
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 4555 45566666544 35888888654321 11111112345678899999987766432 22 347789985
Q ss_pred hhhhcccceeeeEEecCCCCceeeeeeEEEEcC-CCCeEEEec----------------CCCeEEEEeCCCceeeeccCC
Q 019384 221 EASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP-IYGTFATGG----------------CDGFVNVWDGNNKKRLYQYSK 283 (342)
Q Consensus 221 ~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp-~~~~l~sgs----------------~Dg~I~iWd~~~~~~~~~~~~ 283 (342)
...... +... . ... ++|+| +|++|++++ .+..|++||..+++. ..+..
T Consensus 273 ~g~~~~---l~~~-~---------~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~ 337 (396)
T 3c5m_A 273 TLENEE---VMVM-P---------PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCK 337 (396)
T ss_dssp TCCEEE---EEEC-C---------SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEE
T ss_pred CCCeEE---eeeC-C---------CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccC
Confidence 432111 1100 0 122 78999 999888754 347899999987653 33333
Q ss_pred CCc-----------ceEEEEECCCCCEEEEEEec
Q 019384 284 YPT-----------SIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 284 ~~~-----------~V~~v~~spdg~~las~s~~ 306 (342)
+.. .+..++|+|||++|+.++..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 338 HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CCCccccccccccCCCCCceEccCCCeEEEEecC
Confidence 433 25678999999999887753
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=2.2e-16 Score=143.24 Aligned_cols=248 Identities=11% Similarity=0.042 Sum_probs=152.8
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECC-CceeeeeeecC--CceEEEEEeCCCC--eE-EEe-------------cC
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDAS-ANVLRGEFMHG--GPVLDCCFHDDSS--GF-SAS-------------AD 80 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~-~~~~~~~~~h~--~~V~~~~~~~~~~--~~-s~s-------------~D 80 (342)
..+..++|+|++++|++++.+ +|++||+. ++++.....+. +.+..++|+++++ ++ ++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 468899999999999999988 99999986 66654333322 3455688888887 23 442 58
Q ss_pred CcEEEEEecc-Ccee-ecc----cCCcceeEEEEeCCCCEEEEee-CCCcEEEEcCC-CCCCcceeeeeec--CCCCcEE
Q 019384 81 HTVRRLVFSH-GKED-ILG----KHDAPVRCIEYSYAAGQVITGS-WDKSLKCWDPR-GASGQERTLVGTY--PQPERVY 150 (342)
Q Consensus 81 ~~i~~w~~~~-~~~~-~~~----~h~~~V~~~~~~~~~~~l~sgs-~D~~I~iWd~~-~~~~~~~~~~~~~--~~~~~v~ 150 (342)
+.+.+|++.. ++.. .+. .+...+.+++|+|++++|+++. .++.|++||++ ++.......+... ......+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 8999999974 4322 222 3557799999999999887665 46899999986 3321111111100 1112234
Q ss_pred EEeccCCeEEEEEc-CCeEEEEeCC--CCCCcc--c-ccccc--cc--e-------eeEEEE-EeeCCceEEEEccCCe-
Q 019384 151 SLSLVGNRLVVATA-GRHVNVYDLR--NMSQPE--Q-RRESS--LK--Y-------QTRCVR-CYPNGTGYALSSVEGR- 211 (342)
Q Consensus 151 ~~s~~~~~~~~~s~-d~~v~iwd~~--~~~~~~--~-~~~~~--~~--~-------~~~~v~-~~~~~~~~~~~s~~~~- 211 (342)
.++.+++.++++.. +++|.+|++. +++... . ....+ .. . ....++ ++|+|+.++++..+..
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 56666777777664 6789999865 332110 0 00011 11 1 367788 9999998877654331
Q ss_pred ---EEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC---CCCeEEEecCC-CeEEEEeCCCc
Q 019384 212 ---VAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP---IYGTFATGGCD-GFVNVWDGNNK 275 (342)
Q Consensus 212 ---~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp---~~~~l~sgs~D-g~I~iWd~~~~ 275 (342)
-.+.+|++....... . +....... ...+..++|+| +|++|++++.+ ++|++|+++..
T Consensus 279 ~~~~~i~v~~~~~~g~~~-~-~~~~~~~~-----~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 279 ELQGYIAGFKLRDCGSIE-K-QLFLSPTP-----TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSCCEEEEEEECTTSCEE-E-EEEEEECS-----SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCeEEEEEECCCCCEE-E-eeeeeecC-----CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 034568774211111 0 00000000 01256789999 89999988764 89999998754
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=2.6e-15 Score=136.06 Aligned_cols=269 Identities=9% Similarity=0.005 Sum_probs=155.8
Q ss_pred eEEEEeCC--CcEEEEEC--CCceeeee--e--ecCCceEEEEEeCCCC-eEEEecCCcEEEEEec-cCceeecccCC--
Q 019384 33 HLLVSSWD--KSVRLYDA--SANVLRGE--F--MHGGPVLDCCFHDDSS-GFSASADHTVRRLVFS-HGKEDILGKHD-- 100 (342)
Q Consensus 33 ~l~s~s~D--gti~vwd~--~~~~~~~~--~--~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~-~~~~~~~~~h~-- 100 (342)
+|+.|++. +.|.+|++ .++.+... . .....+..++|+++++ +++++.+ .+.+|++. +++...+..+.
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 45566653 56887765 44544322 1 1334678899998887 5677777 99999987 55533222111
Q ss_pred cceeEEEEeCCCCE--EEEee-------------CCCcEEEEcCCCCCCcceeeeeec--CCCCc--EEEEeccCCeEEE
Q 019384 101 APVRCIEYSYAAGQ--VITGS-------------WDKSLKCWDPRGASGQERTLVGTY--PQPER--VYSLSLVGNRLVV 161 (342)
Q Consensus 101 ~~V~~~~~~~~~~~--l~sgs-------------~D~~I~iWd~~~~~~~~~~~~~~~--~~~~~--v~~~s~~~~~~~~ 161 (342)
+.+.+++|+|++++ ++++. .++++++|++..... ....+... ..... ...++++++.+++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK-LEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC-EEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc-CcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 23566889999984 45553 689999999863211 11112211 11122 3446666777776
Q ss_pred EEc-CCeEEEEeCC-CCCCccc-ccccc-cceeeEEEEEeeCCceEEEEcc-CCeEEEEEeechhhhhcc-cceeeeEEe
Q 019384 162 ATA-GRHVNVYDLR-NMSQPEQ-RRESS-LKYQTRCVRCYPNGTGYALSSV-EGRVAMEFFDLSEASQAK-KYAFKCHRK 235 (342)
Q Consensus 162 ~s~-d~~v~iwd~~-~~~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~s~-~~~~~i~~~d~~~~~~~~-~~~~~~h~~ 235 (342)
+.. ++.|++||+. +++.... ..... ....+..++++|+++.+++++. ++.+.++.+|..+..... ...+..
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~--- 238 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL--- 238 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES---
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc---
Confidence 553 5789999997 5432111 11101 1234678899999998877654 566655434432211100 000000
Q ss_pred cCCC-Cceee------eeeEEE-EcCCCCeEEEecCC-C-----eEEEEeCC-Cceeee---ccCCCCcceEEEEECC--
Q 019384 236 SEAG-RDIVY------PVNAIA-FHPIYGTFATGGCD-G-----FVNVWDGN-NKKRLY---QYSKYPTSIAALSFSR-- 295 (342)
Q Consensus 236 ~~~~-~~~~~------~v~~v~-~sp~~~~l~sgs~D-g-----~I~iWd~~-~~~~~~---~~~~~~~~V~~v~~sp-- 295 (342)
...+ ..+.. .+..++ |+|||++|+++..+ . +|.+|++. +++... ....+...+..++|+|
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence 0000 00010 367899 99999988766532 2 89999986 554332 1333445567899999
Q ss_pred -CCCEEEEEEec
Q 019384 296 -DGRLLAVASSY 306 (342)
Q Consensus 296 -dg~~las~s~~ 306 (342)
||++|++++..
T Consensus 319 ~dg~~l~v~~~~ 330 (365)
T 1jof_A 319 WSDEWMAITDDQ 330 (365)
T ss_dssp TCTTEEEEECSS
T ss_pred cCCCEEEEEEcC
Confidence 89999988754
No 165
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=3.8e-15 Score=133.42 Aligned_cols=226 Identities=13% Similarity=0.067 Sum_probs=149.1
Q ss_pred CCCeEEEEEcCCCCeEE-EEeCCCcEEEEECCCceeeeeeec-CC---------ceEEEEEeCCCC-eEEEe--cCCcEE
Q 019384 19 SDGISNLRFSNHSDHLL-VSSWDKSVRLYDASANVLRGEFMH-GG---------PVLDCCFHDDSS-GFSAS--ADHTVR 84 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~-s~s~Dgti~vwd~~~~~~~~~~~h-~~---------~V~~~~~~~~~~-~~s~s--~D~~i~ 84 (342)
...+..++|+|++++++ +...+++|.+||..+++....+.. .+ .+.++.|++++. ++.++ .++.|.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 34578899999999655 556689999999988776554432 21 268899998766 44444 478899
Q ss_pred EEEeccCcee-ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeee--cCCCCcE--EEEeccCCeE
Q 019384 85 RLVFSHGKED-ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGT--YPQPERV--YSLSLVGNRL 159 (342)
Q Consensus 85 ~w~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~--~~~~~~v--~~~s~~~~~~ 159 (342)
+||..+++.. .+..+...+.+++|+|+++.|+.++.++.|.+||+.+.... ..+.. ....... +.++.+++.+
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKIL--SRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEE--EEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEE--EEEEcCCCCCCcccceEEECCCCCEE
Confidence 9999887743 34446666889999999999999999999999998754321 11111 0111222 4566677766
Q ss_pred EEEEcC-CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecC
Q 019384 160 VVATAG-RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSE 237 (342)
Q Consensus 160 ~~~s~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~ 237 (342)
+++..+ +.|.+||+.+++...... .. ....++++|+++.++++. .++.+ .+||......... +..
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~---~~-~~~~~~~s~dg~~l~v~~~~~~~v--~~~d~~~~~~~~~--~~~----- 312 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVA---AP-ESLAVLFNPARNEAYVTHRQAGKV--SVIDAKSYKVVKT--FDT----- 312 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEE---CS-SCCCEEEETTTTEEEEEETTTTEE--EEEETTTTEEEEE--EEC-----
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEE---cC-CCceEEECCCCCEEEEEECCCCeE--EEEECCCCeEEEE--Eec-----
Confidence 666554 899999998764322111 11 124578899998666554 56654 5688754322211 111
Q ss_pred CCCceeeeeeEEEEcCCCCeEEEecCC
Q 019384 238 AGRDIVYPVNAIAFHPIYGTFATGGCD 264 (342)
Q Consensus 238 ~~~~~~~~v~~v~~sp~~~~l~sgs~D 264 (342)
...+.+++|+|+|++|+.+..+
T Consensus 313 -----~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 313 -----PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----CSEEEEEEECTTSCEEEEEEEC
T ss_pred -----CCCCCeEEEcCCCCEEEEEEcc
Confidence 0146789999999977665544
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=9.7e-15 Score=144.56 Aligned_cols=271 Identities=10% Similarity=0.048 Sum_probs=163.1
Q ss_pred EEEEEcCCCCeEEEEeCC---------CcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce
Q 019384 23 SNLRFSNHSDHLLVSSWD---------KSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE 93 (342)
Q Consensus 23 ~~l~fs~~~~~l~s~s~D---------gti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~ 93 (342)
.+++|||||++|+.++.| +.+.|||+.++++.....|.+.+....|+|+++.+.-+.|+.|.+|+..++..
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 458999999999999887 45569999998877766778889999999998877666789999999887764
Q ss_pred eec--ccCCcce-----------------eEEEEeCCCCEEEEeeCCC--------------------------------
Q 019384 94 DIL--GKHDAPV-----------------RCIEYSYAAGQVITGSWDK-------------------------------- 122 (342)
Q Consensus 94 ~~~--~~h~~~V-----------------~~~~~~~~~~~l~sgs~D~-------------------------------- 122 (342)
..+ .++...+ ..+.|+|||+.|+.++.|.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 332 2333222 3589999999998876443
Q ss_pred ----cEEEEcCCC---CCCcceeeeeec----CCCCcE--EEEeccCCeEEEEEcC----CeEEEEeCCCCC----Cccc
Q 019384 123 ----SLKCWDPRG---ASGQERTLVGTY----PQPERV--YSLSLVGNRLVVATAG----RHVNVYDLRNMS----QPEQ 181 (342)
Q Consensus 123 ----~I~iWd~~~---~~~~~~~~~~~~----~~~~~v--~~~s~~~~~~~~~s~d----~~v~iwd~~~~~----~~~~ 181 (342)
+|++||+.+ +.......+... .+...+ ..++.+++.++..... ..|.+||+.+++ ....
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 467778765 321011111110 012223 3455666655544432 269999998865 1111
Q ss_pred c-c-cccccee-----eEEEEEeeCCceEE-EEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEc
Q 019384 182 R-R-ESSLKYQ-----TRCVRCYPNGTGYA-LSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFH 252 (342)
Q Consensus 182 ~-~-~~~~~~~-----~~~v~~~~~~~~~~-~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~s 252 (342)
. . ....... ....+|+|||+.++ ..+ .++...|++||........ +.. +. ..|..+. .
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~---lT~------g~---~~v~~~~-~ 371 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF---ITK------GT---WEVIGIE-A 371 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE---SCC------SS---SCEEEEE-E
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe---ccc------CC---EEEEEEE-E
Confidence 1 0 0001111 23567999999766 444 6777888899975432111 110 10 1233332 2
Q ss_pred CCCCe-EEEecC----CCeEEEE--eCCCceeeeccC----CCCcceEEEEECCCCCEEEEEEec
Q 019384 253 PIYGT-FATGGC----DGFVNVW--DGNNKKRLYQYS----KYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 253 p~~~~-l~sgs~----Dg~I~iW--d~~~~~~~~~~~----~~~~~V~~v~~spdg~~las~s~~ 306 (342)
++++. ++++.. .+..+|| ++..+.....++ +....+..++|||||++++...+.
T Consensus 372 ~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 372 LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECS
T ss_pred EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCC
Confidence 34554 455554 2344555 444433222233 234568999999999988766643
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=1.3e-14 Score=129.45 Aligned_cols=276 Identities=9% Similarity=-0.032 Sum_probs=170.2
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeE-EEecCCcEEEEEeccCceeec-
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGF-SASADHTVRRLVFSHGKEDIL- 96 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~-s~s~D~~i~~w~~~~~~~~~~- 96 (342)
+..|.+++|++++..+++.+.++++++|. .........+...+.+++|.+++.++ ++..++.|.+|+..+++...+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT--AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE--CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred ccccceeeecCCccceeEEeecccCcccc--cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 45688999999998888888999999992 22333334466677899998887776 567788999999887765433
Q ss_pred ccCCcceeEEEEeCCCCEEEEeeCC----CcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEEEEc------
Q 019384 97 GKHDAPVRCIEYSYAAGQVITGSWD----KSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATA------ 164 (342)
Q Consensus 97 ~~h~~~V~~~~~~~~~~~l~sgs~D----~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~------ 164 (342)
..+...+.+++++++++++++...+ +.|.+||.++... ...+........+..+.+ +++.+++...
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL--QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC--EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE--EEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 3566789999999999887777666 6899999865432 111111111223444444 4444443332
Q ss_pred CCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceeeeEEecCCCCcee
Q 019384 165 GRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIV 243 (342)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~ 243 (342)
.+.|..+|..+.... ..... ......++++|+++.++++ +.++. +++||........ ..+....... ....
T Consensus 161 ~~~l~~~~~~~~~~~--~~~~~-~~~~~~i~~~~dg~~l~v~~~~~~~--i~~~d~~~~g~~~-~~~~~~~~~~-~~~~- 232 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVT--PIIQN-ISVANGIALSTDEKVLWVTETTANR--LHRIALEDDGVTI-QPFGATIPYY-FTGH- 232 (333)
T ss_dssp CEEEEEECTTSCCEE--EEEEE-ESSEEEEEECTTSSEEEEEEGGGTE--EEEEEECTTSSSE-EEEEEEEEEE-CCSS-
T ss_pred CceEEEEeCCCCEEE--EeecC-CCcccceEECCCCCEEEEEeCCCCe--EEEEEecCCCcCc-ccccceEEEe-cCCC-
Confidence 234555665433211 11111 1135678899998866544 44554 4568774221110 0010000000 0000
Q ss_pred eeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCC------cceEEEEECCCCCEEEEEEecc
Q 019384 244 YPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYP------TSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 244 ~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~------~~V~~v~~spdg~~las~s~~~ 307 (342)
..+..++++++|..+++...++.|.+||.+ ++.+..+.... ..+.+++|+|||+.|.+++..+
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 136779999999988887788999999985 55554443332 2689999999998777666554
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=3.8e-14 Score=126.59 Aligned_cols=239 Identities=11% Similarity=0.045 Sum_probs=154.9
Q ss_pred CCCeEEEEEcCCCCeEEEEeCC------------------------CcEEEEECCCceeeeeee--cCCceEEEEEeCCC
Q 019384 19 SDGISNLRFSNHSDHLLVSSWD------------------------KSVRLYDASANVLRGEFM--HGGPVLDCCFHDDS 72 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~D------------------------gti~vwd~~~~~~~~~~~--h~~~V~~~~~~~~~ 72 (342)
-..|.+|+|+++|+++++.+.+ ++|.+||..++++..... +-..+.++++.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999988888 479999998877665543 33478899999877
Q ss_pred CeE-EEecCCcEEEEEeccCc--eeec---------ccCCcceeEEEEeC-CCCEEEEee-CCCcEEEEcCCCCCCccee
Q 019384 73 SGF-SASADHTVRRLVFSHGK--EDIL---------GKHDAPVRCIEYSY-AAGQVITGS-WDKSLKCWDPRGASGQERT 138 (342)
Q Consensus 73 ~~~-s~s~D~~i~~w~~~~~~--~~~~---------~~h~~~V~~~~~~~-~~~~l~sgs-~D~~I~iWd~~~~~~~~~~ 138 (342)
.++ +.+.++.|++|+..... ...+ .++......++++| ++..+++.+ .++.|++||... . ...
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~--~~~ 179 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-K--FVT 179 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-C--EEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-C--EEE
Confidence 775 55567889999976542 2222 23445688999999 777777776 689999999532 1 112
Q ss_pred eeeecCC----------CCcEEEEecc-CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc
Q 019384 139 LVGTYPQ----------PERVYSLSLV-GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS 207 (342)
Q Consensus 139 ~~~~~~~----------~~~v~~~s~~-~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s 207 (342)
.+..... ...-++++.+ +..+++...+++|++||..+++....
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~-------------------------- 233 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE-------------------------- 233 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE--------------------------
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE--------------------------
Confidence 2211110 0112334444 33455556677899999864421100
Q ss_pred cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC------CCCeEEEecCCCeEEEEeCCCceeeecc
Q 019384 208 VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP------IYGTFATGGCDGFVNVWDGNNKKRLYQY 281 (342)
Q Consensus 208 ~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp------~~~~l~sgs~Dg~I~iWd~~~~~~~~~~ 281 (342)
+..... . ..+.+++|+| ++..+++...+.+|++||..+++.+..+
T Consensus 234 ---------~~~~~~-~-------------------~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 234 ---------IKHASF-G-------------------RNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp ---------ECCTTT-T-------------------TCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred ---------Eecccc-C-------------------CCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 000000 0 0133445555 4444555556779999999988887776
Q ss_pred ---CCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 282 ---SKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 282 ---~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
.++.....+|+++|||.++++..... .|.++.++
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~-----------~I~~~~~~ 321 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTN-----------TVWKFTLT 321 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSC-----------CEEEEEEE
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCC-----------EEEEEeCC
Confidence 36677899999999997666554333 47777664
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=1e-14 Score=132.16 Aligned_cols=259 Identities=10% Similarity=0.006 Sum_probs=164.6
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEECCCceeeeeee-------cCCceEEEEEeCCCCe-EEEec--CCcE
Q 019384 24 NLRFSNHSDHLLVSS----------WDKSVRLYDASANVLRGEFM-------HGGPVLDCCFHDDSSG-FSASA--DHTV 83 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s----------~Dgti~vwd~~~~~~~~~~~-------h~~~V~~~~~~~~~~~-~s~s~--D~~i 83 (342)
.++|+||+++|.++. .|++|.+||..+.+....+. +......+.|+++++. +++.. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998876 37889999998766554432 2345667899987765 45543 5789
Q ss_pred EEEEeccCceeec-ccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCCCCCCcceeeee---ecC-CCCc-EEEEeccC
Q 019384 84 RRLVFSHGKEDIL-GKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPRGASGQERTLVG---TYP-QPER-VYSLSLVG 156 (342)
Q Consensus 84 ~~w~~~~~~~~~~-~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~~~~---~~~-~~~~-v~~~s~~~ 156 (342)
.+||..+.+.... ..+.. ...+.+.|++ ..+++.+.|+++.+|+.+.... ...... ... .... ......++
T Consensus 134 ~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK-VASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSS-EEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCc-EeeeccccceEcCCCCceEEEecccC
Confidence 9999988764322 22211 2235567765 6788899999999998753221 110000 000 0001 11123445
Q ss_pred CeEEEEEcCCeEEEEeCCCCCCccccc-c------cccceeeE---EEEEeeCCceEEEEcc-C--------CeEEEEEe
Q 019384 157 NRLVVATAGRHVNVYDLRNMSQPEQRR-E------SSLKYQTR---CVRCYPNGTGYALSSV-E--------GRVAMEFF 217 (342)
Q Consensus 157 ~~~~~~s~d~~v~iwd~~~~~~~~~~~-~------~~~~~~~~---~v~~~~~~~~~~~~s~-~--------~~~~i~~~ 217 (342)
..++..+.++.+.++|+.......... . ........ .++++|+++.+++... + ....+++|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 667777888899999986542211000 0 00000111 2578899877766532 1 23456789
Q ss_pred echhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCc--eeeeccCCCCcceEEEEECC
Q 019384 218 DLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNK--KRLYQYSKYPTSIAALSFSR 295 (342)
Q Consensus 218 d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~--~~~~~~~~~~~~V~~v~~sp 295 (342)
|..+.+.... +..+ . +..++|+|+|++|++++. ++|.+||.+++ +.+.++..+...-+.++|+|
T Consensus 292 D~~t~~~v~~--i~~~----------~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 292 DTKTKQRVAR--IPGR----------D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp ETTTTEEEEE--EECT----------T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred ECCCCcEEEE--EecC----------C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 9865432211 1111 1 678999999999988886 99999999999 88888766777789999999
Q ss_pred CCC
Q 019384 296 DGR 298 (342)
Q Consensus 296 dg~ 298 (342)
||+
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 986
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.68 E-value=8.3e-15 Score=130.85 Aligned_cols=230 Identities=9% Similarity=0.026 Sum_probs=142.7
Q ss_pred CeEEEEEcCCCCeEE-EEeCCCcEEEEECCCceeeeeeec-------CCceEEEEEeCCCCe-EEEecC-----------
Q 019384 21 GISNLRFSNHSDHLL-VSSWDKSVRLYDASANVLRGEFMH-------GGPVLDCCFHDDSSG-FSASAD----------- 80 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~-s~s~Dgti~vwd~~~~~~~~~~~h-------~~~V~~~~~~~~~~~-~s~s~D----------- 80 (342)
.+..++|+|++++++ ++..+++|.+||+.+++....... ...+.+++|+++++. ++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 578999999998664 556789999999988776544432 223788999987764 566544
Q ss_pred -CcEEEEEeccCcee---ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC--CC--------
Q 019384 81 -HTVRRLVFSHGKED---ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYP--QP-------- 146 (342)
Q Consensus 81 -~~i~~w~~~~~~~~---~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~--~~-------- 146 (342)
+.+.+||+.+++.. ....+...+.+++|+|+++ ++.++. .|.+||++++... ..+.... ..
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYT--VALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEE--EEECSTTCCCTTBCCCBCC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCcee--ccccccccCCccccCccce
Confidence 89999999875421 1122334688999999998 655544 4999998754321 1111100 00
Q ss_pred --------C----cEEEEeccCC-------------eEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEee-CC
Q 019384 147 --------E----RVYSLSLVGN-------------RLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYP-NG 200 (342)
Q Consensus 147 --------~----~v~~~s~~~~-------------~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 200 (342)
. ....+.+.++ .+.....++.+++|++.. .......++++| ++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~sp~dg 267 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD-----------LTELYFTGLRSPKDP 267 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE-----------CSSCEEEEEECSSCT
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc-----------CCCcceeeEecCCCC
Confidence 0 0111111100 011122223344444321 122456788899 99
Q ss_pred ceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec
Q 019384 201 TGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ 280 (342)
Q Consensus 201 ~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~ 280 (342)
+.++++ ++ .+++||..+....... .. ...+.+++|+|++++|++++.++.|++||.++++.+..
T Consensus 268 ~~l~~~--~~--~v~~~d~~~~~~~~~~--~~----------~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 268 NQIYGV--LN--RLAKYDLKQRKLIKAA--NL----------DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp TEEEEE--ES--EEEEEETTTTEEEEEE--EC----------SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEE
T ss_pred CEEEEE--cC--eEEEEECccCeEEEEE--cC----------CCCccceEECCCCCEEEEecCCCeEEEEeccccceeee
Confidence 988877 44 4567998643221111 11 01367899999999998888999999999998887766
Q ss_pred cC
Q 019384 281 YS 282 (342)
Q Consensus 281 ~~ 282 (342)
++
T Consensus 332 ~~ 333 (349)
T 1jmx_B 332 IK 333 (349)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=2.7e-13 Score=118.15 Aligned_cols=243 Identities=8% Similarity=-0.011 Sum_probs=153.9
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee------ecCCceEEEEEe-CCCCeEEEec--CCcEEEE
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF------MHGGPVLDCCFH-DDSSGFSASA--DHTVRRL 86 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~------~h~~~V~~~~~~-~~~~~~s~s~--D~~i~~w 86 (342)
..+-..+.+++++++++++++...++.|++||.....+.... .+...+.++++. +++.++.+.. ++.|.+|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999998888889999999998744332221 133567899994 6777766553 7889999
Q ss_pred EeccCceeec-ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc--CCeEEEEE
Q 019384 87 VFSHGKEDIL-GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--GNRLVVAT 163 (342)
Q Consensus 87 ~~~~~~~~~~-~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--~~~~~~~s 163 (342)
+........+ ..+...+.+++++++++.+++.+.++.|.+||... .....+...........+.++ ++.+++.+
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 8433223333 23446789999999998888888889999999642 111222211122234445544 44555556
Q ss_pred cCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCC-eEEEEEeechhhhhcccceeeeEEecCCCCce
Q 019384 164 AGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEG-RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDI 242 (342)
Q Consensus 164 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~-~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~ 242 (342)
.++.|++||.... .............+..+++.+++..+++...++ .+ .+||... ... ..+..+..
T Consensus 183 ~~~~i~~~~~~g~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i--~~~~~~g-~~~--~~~~~~~~------- 249 (286)
T 1q7f_A 183 RAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNL--TIFTQDG-QLI--SALESKVK------- 249 (286)
T ss_dssp GGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEE--EEECTTS-CEE--EEEEESSC-------
T ss_pred CCCEEEEEcCCCC-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEE--EEECCCC-CEE--EEEcccCC-------
Confidence 6889999997532 111111111113467888999998776666554 55 5588532 111 11221111
Q ss_pred eeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCc
Q 019384 243 VYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNK 275 (342)
Q Consensus 243 ~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~ 275 (342)
...+.+++++|+|+++++ +.|++|++|+....
T Consensus 250 ~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 250 HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 012568999999987777 56999999987653
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=1e-13 Score=124.16 Aligned_cols=250 Identities=9% Similarity=0.006 Sum_probs=153.9
Q ss_pred CCeEEEEEcCCCCeEEEE---------eCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe-EEEecC---Cc--EE
Q 019384 20 DGISNLRFSNHSDHLLVS---------SWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-FSASAD---HT--VR 84 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~---------s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~s~s~D---~~--i~ 84 (342)
..+..++| ||++++.. +.++.|.+||+.+++.+.. ..+..+.|+|+++. +.++.+ +. |.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 46778888 89888754 2378899999988765443 56788999988865 444433 33 56
Q ss_pred EEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCC---------------------------CcEEEEcCCCCCCcce
Q 019384 85 RLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWD---------------------------KSLKCWDPRGASGQER 137 (342)
Q Consensus 85 ~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D---------------------------~~I~iWd~~~~~~~~~ 137 (342)
+|++.+++...+..+.. +.+++|+||++.|+.++.+ ..|.+||+.++.. .
T Consensus 89 ~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~ 165 (347)
T 2gop_A 89 VADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--I 165 (347)
T ss_dssp EEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--E
T ss_pred EEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--E
Confidence 66666666544444444 9999999999988877643 5688999875432 0
Q ss_pred eeeeecCCCCcEEEEeccCCeEEEEEcCC-------eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCC
Q 019384 138 TLVGTYPQPERVYSLSLVGNRLVVATAGR-------HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEG 210 (342)
Q Consensus 138 ~~~~~~~~~~~v~~~s~~~~~~~~~s~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~ 210 (342)
..+.. . ......++.++ .++++..+. ...+|.+.++ .. ...... ..... ++|+|+.++..+.+.
T Consensus 166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~~-~~l~~~--~~~~~--~spdg~~l~~~~~~~ 236 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-KE-EKMFEK--VSFYA--VDSDGERILLYGKPE 236 (347)
T ss_dssp EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-EE-EEEEEE--ESEEE--EEECSSCEEEEECCS
T ss_pred eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-ce-EEeccC--cceee--ECCCCCEEEEEEccc
Confidence 12222 2 33344566666 555554432 3345544332 11 111111 22223 389999887776443
Q ss_pred ------eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE-EEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC
Q 019384 211 ------RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA-IAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK 283 (342)
Q Consensus 211 ------~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~-v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~ 283 (342)
...|++|| . .. ... ....| ...+.. ++|+ ++ .+++++.|+.++|| +.+++.. .+..
T Consensus 237 ~~~~~~~~~l~~~d-~-~~-~~~-l~~~~---------~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~ 299 (347)
T 2gop_A 237 KKYMSEHNKLYIYD-G-KE-VMG-ILDEV---------DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAK 299 (347)
T ss_dssp SSCCCSSCEEEEEC-S-SC-EEE-SSTTC---------CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEEC
T ss_pred cCCccccceEEEEC-C-Cc-eEe-ccccC---------CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEec
Confidence 34567777 2 11 111 01111 124665 8899 88 89999999999999 8755443 3334
Q ss_pred CCcceEEEEECCCCCEEEEEEec
Q 019384 284 YPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 284 ~~~~V~~v~~spdg~~las~s~~ 306 (342)
+...|.+++|+| .++++++++
T Consensus 300 ~~~~v~~~~~s~--~~~~~~~~~ 320 (347)
T 2gop_A 300 GRHWIMGFDVDE--IVVYLKETA 320 (347)
T ss_dssp SSSEEEEEEESS--SEEEEEECS
T ss_pred CCCeEEeeeeeC--cEEEEEcCC
Confidence 567899999999 666666554
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.62 E-value=2e-13 Score=134.53 Aligned_cols=249 Identities=9% Similarity=-0.012 Sum_probs=160.9
Q ss_pred CCCCCCCeEEEEEcCCCCeEEEEeCCC-----cEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCc------
Q 019384 15 GNPPSDGISNLRFSNHSDHLLVSSWDK-----SVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHT------ 82 (342)
Q Consensus 15 ~~~~~~~V~~l~fs~~~~~l~s~s~Dg-----ti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~------ 82 (342)
.+.+...+.+++|||||++||.++.++ +|++||+.+++..........+..++|++|++ ++.++.++.
T Consensus 120 ~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 120 SDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp CTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred ccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccc
Confidence 344445688999999999998776544 89999999887655332233367899997765 556676665
Q ss_pred ----------EEEEEeccCce---eeccc--CCcceeEEEEeCCCCEEEEeeC-----CCcEEEEcCCC------CCCcc
Q 019384 83 ----------VRRLVFSHGKE---DILGK--HDAPVRCIEYSYAAGQVITGSW-----DKSLKCWDPRG------ASGQE 136 (342)
Q Consensus 83 ----------i~~w~~~~~~~---~~~~~--h~~~V~~~~~~~~~~~l~sgs~-----D~~I~iWd~~~------~~~~~ 136 (342)
|.+|++.++.. ..+.. |...+..++|+||++.|+.++. +..|.+||+.+ +....
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 88999887652 22232 4556889999999998876654 56899999864 22111
Q ss_pred eeeeeecCCCCcEEEEeccCCeEEEEEcCC----eEEEEeCCCCCCc-ccccccccc-eeeEEEEEeeCCceEEEEccCC
Q 019384 137 RTLVGTYPQPERVYSLSLVGNRLVVATAGR----HVNVYDLRNMSQP-EQRRESSLK-YQTRCVRCYPNGTGYALSSVEG 210 (342)
Q Consensus 137 ~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~----~v~iwd~~~~~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~s~~~ 210 (342)
..+..... .....++.+++.++..+..+ .|.+||+.+.... ......... ..+..+.+++++..+++...++
T Consensus 280 -~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 280 -VKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp -EEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred -EEeeCCCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 22222211 12234677788777766543 5999999775321 111111212 2455677777777777888888
Q ss_pred eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEe----cCCCeEEEEeCCCce
Q 019384 211 RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATG----GCDGFVNVWDGNNKK 276 (342)
Q Consensus 211 ~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sg----s~Dg~I~iWd~~~~~ 276 (342)
...+++|+........ .+..+ ...+..++++|++..|+.. ...++|++||+.+++
T Consensus 358 ~~~l~~~~~~~g~~~~--~l~~~---------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLK--IFPLE---------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEE--EECCC---------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEE--ecCCC---------CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8888889874332111 12221 1247788999998766522 346799999998765
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.60 E-value=2.9e-13 Score=122.55 Aligned_cols=267 Identities=10% Similarity=0.025 Sum_probs=157.2
Q ss_pred CCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe-EEEe----------cCCcEEEEEeccCcee-ecc---c---CC
Q 019384 39 WDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-FSAS----------ADHTVRRLVFSHGKED-ILG---K---HD 100 (342)
Q Consensus 39 ~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~s~s----------~D~~i~~w~~~~~~~~-~~~---~---h~ 100 (342)
.|++|.+||..++++...+.-.... .++|+++++. +++. .++.|.+||..+.+.. .+. + +.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 4789999999887765544322223 8899988765 4554 2567999998876532 221 1 23
Q ss_pred cceeEEEEeCCCCEEEEeeC--CCcEEEEcCCCCCCcceeeeee-cCCCCc-EEEEeccC-CeEEEEEcCCeEEEEeCCC
Q 019384 101 APVRCIEYSYAAGQVITGSW--DKSLKCWDPRGASGQERTLVGT-YPQPER-VYSLSLVG-NRLVVATAGRHVNVYDLRN 175 (342)
Q Consensus 101 ~~V~~~~~~~~~~~l~sgs~--D~~I~iWd~~~~~~~~~~~~~~-~~~~~~-v~~~s~~~-~~~~~~s~d~~v~iwd~~~ 175 (342)
.....++++|++++|+.+.. +++|.+||+++... +.. ...... ...+.+.+ ..+++.+.|+.+.+|++..
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~-----~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY-----VEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE-----EEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE-----EEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 45678999999999988764 68999999875421 222 211111 01233333 4677888899998888754
Q ss_pred CCCccccc----ccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcc--cceeeeEEecCCCCceeeeeeEE
Q 019384 176 MSQPEQRR----ESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAK--KYAFKCHRKSEAGRDIVYPVNAI 249 (342)
Q Consensus 176 ~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~--~~~~~~h~~~~~~~~~~~~v~~v 249 (342)
........ ..........+...+++..++..+.++.+ +.+|........ .+.+........+. .......+
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v--~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~p~g~~~~ 259 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNV--YSADFSGDEVKVDGPWSLLNDEDKAKNW-VPGGYNLV 259 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEE--EEEECSSSSCEEEEEEESCCHHHHHTTC-EECCSSCE
T ss_pred CCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeE--EEEEecCCCceecccccccCcccccccc-ccCCeeEE
Confidence 21111000 00000011122235666666666666654 557764321100 00000000000000 00012237
Q ss_pred EEcCCCCeEEEecC-----------CCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCC
Q 019384 250 AFHPIYGTFATGGC-----------DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPD 318 (342)
Q Consensus 250 ~~sp~~~~l~sgs~-----------Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~ 318 (342)
+|+|+++.++.+.. .++|.+||..+++.+.++..+. +++++|+|||++|.+++. +
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-----~------- 325 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-----G------- 325 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-----S-------
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-----C-------
Confidence 89999887765432 3589999999999998888776 999999999999887653 2
Q ss_pred cEEEEEccCC
Q 019384 319 AIFVRSVNEI 328 (342)
Q Consensus 319 ~~~~~~~~~~ 328 (342)
.|.+|+.+.+
T Consensus 326 ~v~v~D~~t~ 335 (361)
T 2oiz_A 326 NVNVYDISQP 335 (361)
T ss_dssp CEEEEECSSS
T ss_pred eEEEEECCCC
Confidence 4777776555
No 175
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.59 E-value=2e-11 Score=106.43 Aligned_cols=264 Identities=7% Similarity=-0.037 Sum_probs=167.8
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee--ecCCceEEEEEeCCCCeEEEe-cCCcEEEEEeccCcee
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF--MHGGPVLDCCFHDDSSGFSAS-ADHTVRRLVFSHGKED 94 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~--~h~~~V~~~~~~~~~~~~s~s-~D~~i~~w~~~~~~~~ 94 (342)
+...+.+++++++|+..++...++.|.+||.. +...... .+...+.++++.+++.++.+. .++.+..|+.. +...
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 90 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIK 90 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE
Confidence 35689999999999988877778999999988 5443322 245678899998777776554 47788888865 3322
Q ss_pred ec--ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc--CCeEEEEEcCCeEEE
Q 019384 95 IL--GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--GNRLVVATAGRHVNV 170 (342)
Q Consensus 95 ~~--~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--~~~~~~~s~d~~v~i 170 (342)
.+ ......+.++++.+++.++++...++.|.+||. ++.. ...........+..+..+ ++.+++...++.|..
T Consensus 91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 91 EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI---REYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE---EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 22 234567899999998888887777889999997 3221 111111112234445544 444444445678999
Q ss_pred EeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEE
Q 019384 171 YDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIA 250 (342)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~ 250 (342)
||. +++... .........+..+++.+++..+++...++.+ ..||. ... ...+.+.. ....+.+++
T Consensus 167 ~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i--~~~~~-~g~-~~~~~~~~---------~~~~~~~i~ 231 (299)
T 2z2n_A 167 ITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKI--GRITT-SGE-ITEFKIPT---------PNARPHAIT 231 (299)
T ss_dssp ECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEE--EEECT-TCC-EEEEECSS---------TTCCEEEEE
T ss_pred EcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceE--EEECC-CCc-EEEEECCC---------CCCCceeEE
Confidence 998 443211 1111112345678888888865555455544 45776 221 11111110 012477899
Q ss_pred EcCCCCeEEEecCCCeEEEEeCCCceee-eccCCCCcceEEEEECCCCCEEEEEE
Q 019384 251 FHPIYGTFATGGCDGFVNVWDGNNKKRL-YQYSKYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 251 ~sp~~~~l~sgs~Dg~I~iWd~~~~~~~-~~~~~~~~~V~~v~~spdg~~las~s 304 (342)
++++|..+++...++.|.+||.. ++.. ..+..+...+.++++ ++|++.++.+
T Consensus 232 ~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 232 AGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp ECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred ECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec
Confidence 99999877777778999999984 4432 223445567899999 9999877653
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=2.6e-12 Score=126.50 Aligned_cols=266 Identities=10% Similarity=-0.007 Sum_probs=158.9
Q ss_pred CCCCeEEEEeCC-Cc--EEEEEC--CCceeeeee-------ecCCceEEEEEeCCCCeE-EEec-CC----cEEEEEecc
Q 019384 29 NHSDHLLVSSWD-KS--VRLYDA--SANVLRGEF-------MHGGPVLDCCFHDDSSGF-SASA-DH----TVRRLVFSH 90 (342)
Q Consensus 29 ~~~~~l~s~s~D-gt--i~vwd~--~~~~~~~~~-------~h~~~V~~~~~~~~~~~~-s~s~-D~----~i~~w~~~~ 90 (342)
|+|++++-...+ +. -.||.. .++.....+ .|...+..+.|+|+++.+ .++. +| .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 788877644433 21 144543 333322111 133357889999888754 3332 23 799999988
Q ss_pred CceeecccCCcceeEEEEeCCCCEEEEeeCCCc----------------EEEEcCCCCCCcceeeeeecCCCCc--EEEE
Q 019384 91 GKEDILGKHDAPVRCIEYSYAAGQVITGSWDKS----------------LKCWDPRGASGQERTLVGTYPQPER--VYSL 152 (342)
Q Consensus 91 ~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~----------------I~iWd~~~~~~~~~~~~~~~~~~~~--v~~~ 152 (342)
++..........+.+++|+||++.|+.++.|+. |++|++.++............+... ...+
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 874432222223678999999999998888876 9999987543221122222112222 3456
Q ss_pred eccCCeEEEEEc-----CCeEEEEeCCC------CCCcccccccccceeeEEEEEeeCCceEEEEccCC--eEEEEEeec
Q 019384 153 SLVGNRLVVATA-----GRHVNVYDLRN------MSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEG--RVAMEFFDL 219 (342)
Q Consensus 153 s~~~~~~~~~s~-----d~~v~iwd~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~--~~~i~~~d~ 219 (342)
+.+++.++..+. +..|.+||+.+ +............. ... .++++|..+++.+..+ ...|+.||.
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYD-YVTNEGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEE-EEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc-EEE-EEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 667777777665 56899999875 32111111111111 122 4678888777665432 345677887
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCe--EEEEeCCCceeeeccCCCCcceEEEEECCCC
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGF--VNVWDGNNKKRLYQYSKYPTSIAALSFSRDG 297 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~--I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg 297 (342)
..........+..|... ..+..++|++++.++++...|+. |++||..+++.+..+..+...|..++++||+
T Consensus 319 ~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEK-------DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKD 391 (710)
T ss_dssp TSCCGGGCEEEECCCSS-------CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTC
T ss_pred CCCCcccceeccCCCCC-------CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCC
Confidence 54321111122222110 14677889887888899988985 5666776777677777777889999999999
Q ss_pred CEEEEE
Q 019384 298 RLLAVA 303 (342)
Q Consensus 298 ~~las~ 303 (342)
..|+..
T Consensus 392 ~~l~~~ 397 (710)
T 2xdw_A 392 TEIFYQ 397 (710)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 866544
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.57 E-value=1.4e-13 Score=125.03 Aligned_cols=251 Identities=12% Similarity=0.024 Sum_probs=147.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee-ecCCceEEEEE--eCCCCeEEE---------------
Q 019384 16 NPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF-MHGGPVLDCCF--HDDSSGFSA--------------- 77 (342)
Q Consensus 16 ~~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~-~h~~~V~~~~~--~~~~~~~s~--------------- 77 (342)
..+...+..++|+|||++|+.++.++.|++||+.+++..... .+.+.+....| ++++..+.+
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 445556667899999999999999999999999887654433 34444444444 577766542
Q ss_pred --------ecCCcEEEEEeccCceeecccCCcceeEEEEeC-CCCEEEEeeCC------CcEEEEcCCCCCCcceeeeee
Q 019384 78 --------SADHTVRRLVFSHGKEDILGKHDAPVRCIEYSY-AAGQVITGSWD------KSLKCWDPRGASGQERTLVGT 142 (342)
Q Consensus 78 --------s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~sgs~D------~~I~iWd~~~~~~~~~~~~~~ 142 (342)
..+..|.+|++.+++...+..+...+..++|+| +++.|+.++.+ ..|.++|+..... . .+..
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~-~l~~ 233 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM--R-KVKT 233 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--E-ESCC
T ss_pred hhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--E-Eeee
Confidence 234578889988887766667777899999999 99888776653 3677778654221 1 1211
Q ss_pred cCCCCcE--EEEeccCCeEEEEEcC--C---eEEEEeCCCCCCccccccccccee---eEEEEEeeCCceEEEEcc----
Q 019384 143 YPQPERV--YSLSLVGNRLVVATAG--R---HVNVYDLRNMSQPEQRRESSLKYQ---TRCVRCYPNGTGYALSSV---- 208 (342)
Q Consensus 143 ~~~~~~v--~~~s~~~~~~~~~s~d--~---~v~iwd~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~s~---- 208 (342)
......+ ..++++++.|+..+.. + .|.+||+.+++............. .....++|+|+.++....
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 313 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSG 313 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC---------
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccc
Confidence 1111122 3466677777655442 2 399999987643211111110000 112368899988775532
Q ss_pred ---CCeEEEEEeechhhhhcccceeeeEEecCCC--CceeeeeeEEEEcCCCCeEEEec-CCCeEEEEeC
Q 019384 209 ---EGRVAMEFFDLSEASQAKKYAFKCHRKSEAG--RDIVYPVNAIAFHPIYGTFATGG-CDGFVNVWDG 272 (342)
Q Consensus 209 ---~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~--~~~~~~v~~v~~sp~~~~l~sgs-~Dg~I~iWd~ 272 (342)
++...|++||...... ..+..|...... ......+..++|+|||+.|+..+ .+|...||.+
T Consensus 314 ~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 314 YKIENDPFLYVFNMKNGTQ---HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp ---CCCCEEEEEETTTTEE---EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cccCCCCEEEEEeccCCce---EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 3444678899864321 122222210000 00000256789999999877655 5777777754
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=5.6e-13 Score=130.98 Aligned_cols=244 Identities=7% Similarity=-0.101 Sum_probs=153.2
Q ss_pred CCCCCCCCeEEEEEcCCCCeEE-----EEeCCCcEEEEECCCceee-eeeecCCce--EEEEEeCCCC-eEEEecCCc--
Q 019384 14 LGNPPSDGISNLRFSNHSDHLL-----VSSWDKSVRLYDASANVLR-GEFMHGGPV--LDCCFHDDSS-GFSASADHT-- 82 (342)
Q Consensus 14 ~~~~~~~~V~~l~fs~~~~~l~-----s~s~Dgti~vwd~~~~~~~-~~~~h~~~V--~~~~~~~~~~-~~s~s~D~~-- 82 (342)
+.+.|...+.+++|||||++|| +|+.+.+|++||+.+++.+ .. +...+ ..++|+++++ ++.++.|..
T Consensus 115 ~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~--~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 115 WSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD--VIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC--CBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred hccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc--ccCcccccceEEecCCCEEEEEEecCCCC
Confidence 3445556789999999999998 5556689999999988754 21 22222 6789998876 457777765
Q ss_pred -----------EEEEEeccCce---eecc--cCCcceeEEEEeCCCCEEEEeeCCC----cEEEEcCCCCCCcceeeeee
Q 019384 83 -----------VRRLVFSHGKE---DILG--KHDAPVRCIEYSYAAGQVITGSWDK----SLKCWDPRGASGQERTLVGT 142 (342)
Q Consensus 83 -----------i~~w~~~~~~~---~~~~--~h~~~V~~~~~~~~~~~l~sgs~D~----~I~iWd~~~~~~~~~~~~~~ 142 (342)
|++|++.++.. .++. .|...+.++.|+|||++|+.++.++ .|.+||..++ .... +..
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~~~~-l~~ 269 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--DFRL-LVK 269 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--SCEE-EEE
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--ceEE-eec
Confidence 99999987752 2222 3556788999999999888777666 6777765432 2222 222
Q ss_pred cCCCCcEEEEeccCCeEEEEEc----CCeEEEEeCCCCCCc-cccccccc-ceeeEEEEEeeCCceEEEEccCCeEEEEE
Q 019384 143 YPQPERVYSLSLVGNRLVVATA----GRHVNVYDLRNMSQP-EQRRESSL-KYQTRCVRCYPNGTGYALSSVEGRVAMEF 216 (342)
Q Consensus 143 ~~~~~~v~~~s~~~~~~~~~s~----d~~v~iwd~~~~~~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~~s~~~~~~i~~ 216 (342)
..... ...+..+++ ++..+. ++.|.+||+.++... ........ ...+..++++ ++..+++...++...+++
T Consensus 270 ~~~~~-~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 270 GVGAK-YEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp CSSCC-EEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCCce-EEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 21111 122234555 555554 468999999765321 01111111 2234556666 666777778888888888
Q ss_pred eechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEE----EecCCCeEEEEeCCCce
Q 019384 217 FDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFA----TGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 217 ~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~----sgs~Dg~I~iWd~~~~~ 276 (342)
++.... .... +..+ ....+..++++|++..|+ +....++|++||+.+++
T Consensus 347 ~~~~g~-~~~~--l~~~--------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 347 ATLKGK-PVRT--VQLP--------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EETTCC-EEEE--CCCS--------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EeCCCC-eeEE--ecCC--------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 875321 1111 1111 012467788999998776 34456799999998765
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.54 E-value=5.7e-12 Score=110.40 Aligned_cols=229 Identities=12% Similarity=0.060 Sum_probs=148.2
Q ss_pred CCCCCeEEEEEcCCCC-eEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEec-CCcEEEEEeccCcee
Q 019384 17 PPSDGISNLRFSNHSD-HLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASA-DHTVRRLVFSHGKED 94 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~-~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~-D~~i~~w~~~~~~~~ 94 (342)
.......+++|+|+++ +++++..++.|.+||..++ ......+.+.+.++++.+++.++.+.. ++.|.+|+..+++..
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 4456778999999998 7788889999999999887 555555777899999998888776554 578999998776643
Q ss_pred ecc-c----CCcceeEEEEeCCCCEEEE----eeC-------------CCcEEEEcCCCCCCcceeeeeecCCCCcEEEE
Q 019384 95 ILG-K----HDAPVRCIEYSYAAGQVIT----GSW-------------DKSLKCWDPRGASGQERTLVGTYPQPERVYSL 152 (342)
Q Consensus 95 ~~~-~----h~~~V~~~~~~~~~~~l~s----gs~-------------D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~ 152 (342)
.+. . ....++.++++|+|.+++| |+. .+.|..+|.. +......... ....-+.+
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~~~~~~~-~~~~gi~~ 179 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLSAPIRDR-VKPNGLAF 179 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEEEEECCC-SSEEEEEE
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---CCEEEeecCC-CCCccEEE
Confidence 321 1 1234678999999988887 331 2355555543 2111111111 11122345
Q ss_pred eccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeee
Q 019384 153 SLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKC 232 (342)
Q Consensus 153 s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 232 (342)
+.+++.+++.+.++.|.+||+..... +. .. ...+...
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~--------~~---~~--------------------~~~~~~~------------ 216 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGE--------TE---YQ--------------------GVHFTVE------------ 216 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSC--------EE---EE--------------------EEEECCS------------
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCc--------Cc---CC--------------------CeEeeCC------------
Confidence 55566665556667888888752100 00 00 0011100
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEE-CCCCCEEEEEEecc
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSF-SRDGRLLAVASSYT 307 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~-spdg~~las~s~~~ 307 (342)
...+..++++++|.++++. ++.|.+||.+ ++.+..+..+.. +.+++| +||++.|.+++...
T Consensus 217 ----------~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 217 ----------PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp ----------SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred ----------CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 0024568999999866666 8899999987 666666666666 899999 69999888887543
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.3e-11 Score=106.22 Aligned_cols=237 Identities=9% Similarity=-0.028 Sum_probs=147.4
Q ss_pred CeEEEEEcCCCCeEE-EEeCCCcEEEEECCCceeeee-eecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeecc-
Q 019384 21 GISNLRFSNHSDHLL-VSSWDKSVRLYDASANVLRGE-FMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILG- 97 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~-s~s~Dgti~vwd~~~~~~~~~-~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~- 97 (342)
...++++++++++++ +...++.|.+||..+...... ..+...+.++++.+++.++.+..++.|..|+........+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 788999999999777 557889999999865443222 22335678899987777776655888999987765543332
Q ss_pred cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCC
Q 019384 98 KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMS 177 (342)
Q Consensus 98 ~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~ 177 (342)
.....+..+++.+++..+++...++.|.+||..+... .............+.++.+++.+++...++.|.+||.....
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 2335788999999998778777788999998643211 11000000111223344445444444445667777654321
Q ss_pred CcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCe
Q 019384 178 QPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGT 257 (342)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~ 257 (342)
.. .... . . ...+..++++++|..
T Consensus 183 ~~------------------------------------~~~~--~-~------------------~~~p~~i~~d~~g~l 205 (270)
T 1rwi_B 183 QV------------------------------------VLPF--T-D------------------ITAPWGIAVDEAGTV 205 (270)
T ss_dssp EE------------------------------------ECCC--S-S------------------CCSEEEEEECTTCCE
T ss_pred eE------------------------------------eecc--c-C------------------CCCceEEEECCCCCE
Confidence 00 0000 0 0 012567899999987
Q ss_pred EEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 258 FATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 258 l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
+++...++.|.+||............+...+.+++++|||+++++.+... .|.++++.+
T Consensus 206 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~-----------~v~~~~~~~ 264 (270)
T 1rwi_B 206 YVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND-----------RVVKLTSLE 264 (270)
T ss_dssp EEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGT-----------EEEEECCCG
T ss_pred EEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCC-----------EEEEEcCCC
Confidence 88888889999999876543332223345789999999999776655443 477776654
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.52 E-value=4e-12 Score=113.62 Aligned_cols=233 Identities=9% Similarity=0.019 Sum_probs=143.8
Q ss_pred CCeEEEEEcCCCCeEEEEeCC---C--cEEEEECCCceeeeeeecCCceEEEEEeCCCCe-EEEecC-------------
Q 019384 20 DGISNLRFSNHSDHLLVSSWD---K--SVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-FSASAD------------- 80 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~D---g--ti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~s~s~D------------- 80 (342)
..+.+++|||||++||.++.+ + .|.+||+.+++......+.. +..+.|+|+++. +.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 457889999999999987754 3 37778888777665555555 899999987764 444432
Q ss_pred --------------CcEEEEEeccCce-eecccCCcceeEEEEeCCCCEEEEeeCCC-------cEEEEcCCCCCCccee
Q 019384 81 --------------HTVRRLVFSHGKE-DILGKHDAPVRCIEYSYAAGQVITGSWDK-------SLKCWDPRGASGQERT 138 (342)
Q Consensus 81 --------------~~i~~w~~~~~~~-~~~~~h~~~V~~~~~~~~~~~l~sgs~D~-------~I~iWd~~~~~~~~~~ 138 (342)
..+.+|++.+++. ..+.. . .+..++|+|++ .+++++.+. ...||.+.+ +....
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~--~~~~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED--GKEEK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET--TEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCC--CceEE
Confidence 4577888877765 44444 3 78899999999 777776552 445554432 22222
Q ss_pred eeeecCCCCcEEEEeccCCeEEEEEcCC--------eEEEEeCCCCCCcccccccccceeeEE-EEEeeCCceEEEEccC
Q 019384 139 LVGTYPQPERVYSLSLVGNRLVVATAGR--------HVNVYDLRNMSQPEQRRESSLKYQTRC-VRCYPNGTGYALSSVE 209 (342)
Q Consensus 139 ~~~~~~~~~~v~~~s~~~~~~~~~s~d~--------~v~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~s~~ 209 (342)
+... ..+..++++++.++.++.++ .|.+|| +++ . ..........+.. +.++ ++ .+++++.+
T Consensus 213 -l~~~---~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 213 -MFEK---VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-V-MGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp -EEEE---ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-E-EESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred -eccC---cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc-e-EeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 2221 23444577888888777543 577777 332 1 1111222334554 6777 77 77777888
Q ss_pred CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE-EEEeCCCceeeeccCCCCcc
Q 019384 210 GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV-NVWDGNNKKRLYQYSKYPTS 287 (342)
Q Consensus 210 ~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I-~iWd~~~~~~~~~~~~~~~~ 287 (342)
+...++ ++ .. .. ..+..+ ...|.+++|+| .++++++.+++. +||... ++ ...++.|...
T Consensus 283 ~~~~l~-~~--~g-~~--~~~~~~---------~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 283 GSVNLY-IW--DG-EI--KPIAKG---------RHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp TEEEEE-EE--SS-SE--EEEECS---------SSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred CcEEEE-Ec--CC-ce--EEEecC---------CCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 877665 54 21 11 111111 12588899999 677777766654 677665 43 4456655543
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=3.5e-12 Score=113.76 Aligned_cols=247 Identities=11% Similarity=0.072 Sum_probs=149.7
Q ss_pred CCCcEEEEECCCceeeeee-------ecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCce-eecccCCcceeEEEEeC
Q 019384 39 WDKSVRLYDASANVLRGEF-------MHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE-DILGKHDAPVRCIEYSY 110 (342)
Q Consensus 39 ~Dgti~vwd~~~~~~~~~~-------~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~-~~~~~h~~~V~~~~~~~ 110 (342)
.+++|.+||..+++....+ ........+.+..+...++...++.|.+||..+.+. ..+ ........+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI-TGFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE-ECCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc-CCCCCCcEEEEeC
Confidence 4899999999987754432 112345677775443344666678999999998875 334 2346688999988
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCC---CCcEEEEeccCCeEEEEE--cCCeEEEEeCCCCCCccccccc
Q 019384 111 AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQ---PERVYSLSLVGNRLVVAT--AGRHVNVYDLRNMSQPEQRRES 185 (342)
Q Consensus 111 ~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~---~~~v~~~s~~~~~~~~~s--~d~~v~iwd~~~~~~~~~~~~~ 185 (342)
++...++...++.|.+||+++.... ..+..... ......+...++.++++. .+++|.++|+.+.+.....
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~--~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i--- 168 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEIT--GYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDEL--- 168 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEE--EEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEE---
T ss_pred CCeEEEEECCCCeEEEEECCCCeEE--EEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEE---
Confidence 8844445448999999998754321 11111110 001122333566666665 3789999999876432111
Q ss_pred ccceeeEEEEEeeCCceEEEEccCC--------eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCe
Q 019384 186 SLKYQTRCVRCYPNGTGYALSSVEG--------RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGT 257 (342)
Q Consensus 186 ~~~~~~~~v~~~~~~~~~~~~s~~~--------~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~ 257 (342)
........+.+.|+++.++++..+. ...+..+|..+.+....+.+. .+ ...+.++|+|++++
T Consensus 169 ~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~------~g----~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 169 TIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK------LG----DWPSEVQLNGTRDT 238 (328)
T ss_dssp ECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC------TT----CCCEEEEECTTSCE
T ss_pred EcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC------CC----CCceeEEEecCCCE
Confidence 1122345677889888655554330 134567887543221111110 00 13678999999998
Q ss_pred EEEecCCCeEEEEeCCCceeee-c-cCCCCcceEEEEECC-CCCEEEEE
Q 019384 258 FATGGCDGFVNVWDGNNKKRLY-Q-YSKYPTSIAALSFSR-DGRLLAVA 303 (342)
Q Consensus 258 l~sgs~Dg~I~iWd~~~~~~~~-~-~~~~~~~V~~v~~sp-dg~~las~ 303 (342)
|..+.. +|.+||..+++... . +.........++++| +++++++.
T Consensus 239 lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 239 LYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 877654 89999998876532 1 222245689999999 45555544
No 183
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=1.9e-12 Score=128.22 Aligned_cols=247 Identities=10% Similarity=-0.007 Sum_probs=151.4
Q ss_pred CCCCCCCeEEEEEcCCCCeEEEEeCC-----CcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCc-------
Q 019384 15 GNPPSDGISNLRFSNHSDHLLVSSWD-----KSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHT------- 82 (342)
Q Consensus 15 ~~~~~~~V~~l~fs~~~~~l~s~s~D-----gti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~------- 82 (342)
.+.+...+.+++|||||++||.++.+ .+|++||+.+++.+....+...+..++|++++.++.++.|..
T Consensus 158 ~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 158 AKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp C----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC-------
T ss_pred ccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccc
Confidence 34444468899999999999877654 469999999887655422322345788997744556666554
Q ss_pred -------EEEEEeccCce---eeccc--CCcceeEEEEeCCCCEEEEeeCCC-----cEEEEcCCCCCCc-ceeeeeecC
Q 019384 83 -------VRRLVFSHGKE---DILGK--HDAPVRCIEYSYAAGQVITGSWDK-----SLKCWDPRGASGQ-ERTLVGTYP 144 (342)
Q Consensus 83 -------i~~w~~~~~~~---~~~~~--h~~~V~~~~~~~~~~~l~sgs~D~-----~I~iWd~~~~~~~-~~~~~~~~~ 144 (342)
|.+|++.++.. ..+.. |...+.++.|+|||+.|+..+.++ .|.+||+.++... .. .+....
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT-ALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE-EEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE-EecCCC
Confidence 77888866552 23332 334588999999999887766544 8999998654211 12 222211
Q ss_pred CCCcEEEEeccCCeEEEEEcC----CeEEEEeCCCCC-CcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeec
Q 019384 145 QPERVYSLSLVGNRLVVATAG----RHVNVYDLRNMS-QPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDL 219 (342)
Q Consensus 145 ~~~~v~~~s~~~~~~~~~s~d----~~v~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~ 219 (342)
. .....++.+++.++..+.+ ..|.+||+.+.. .. ..........+..+++. ++..+++...++...+++++.
T Consensus 317 ~-~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 317 K-AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF-DTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp S-SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEE-EEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET
T ss_pred C-ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCcccc-EEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 1 1222345678888877764 359999987642 11 11111222234455555 555667777888888888875
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEE----EecCCCeEEEEeCCCce
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFA----TGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~----sgs~Dg~I~iWd~~~~~ 276 (342)
... ..+. +..+ ....+..++++|++..|+ +....++|++||+.+++
T Consensus 394 ~g~-~~~~--l~~~--------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 394 DGK-PAGA--VSLP--------GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TSC-EEEE--CBCS--------SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCC-ceee--ccCC--------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 321 1111 1110 012477889999988665 33456799999998765
No 184
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=1.3e-12 Score=127.39 Aligned_cols=240 Identities=13% Similarity=0.049 Sum_probs=142.0
Q ss_pred EEEEc--CCCCe-EEEEeC-CCcEEEEECC--C-ceeeeeee-----cCCceEEEEEeCCCCe-EEEecC----------
Q 019384 24 NLRFS--NHSDH-LLVSSW-DKSVRLYDAS--A-NVLRGEFM-----HGGPVLDCCFHDDSSG-FSASAD---------- 80 (342)
Q Consensus 24 ~l~fs--~~~~~-l~s~s~-Dgti~vwd~~--~-~~~~~~~~-----h~~~V~~~~~~~~~~~-~s~s~D---------- 80 (342)
+.+|+ |||++ |+.++. +..|.+|++. + +....... |...+.+++|+|+++. +.++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 55565 99998 775543 4566666665 3 44444433 5677889999988764 566665
Q ss_pred CcEEEEEecc------Cceeecc-cCCcceeEEEEeCCCCEEEEeeCCC--------cEEEEcCC-CCCC-cceeeeeec
Q 019384 81 HTVRRLVFSH------GKEDILG-KHDAPVRCIEYSYAAGQVITGSWDK--------SLKCWDPR-GASG-QERTLVGTY 143 (342)
Q Consensus 81 ~~i~~w~~~~------~~~~~~~-~h~~~V~~~~~~~~~~~l~sgs~D~--------~I~iWd~~-~~~~-~~~~~~~~~ 143 (342)
..|.+|++.+ +....+. .+...+..++|+|||+.|+.++.++ .|.+||+. ++.. ........+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 4788999887 5655565 6667888999999999998877653 79999987 3310 112222221
Q ss_pred CCCCcEEEEeccCCeEEEEEcCC--eEEEEeCCCCCCcccccccccce-------eeEEEEEeeCCceEEEEccCCeEEE
Q 019384 144 PQPERVYSLSLVGNRLVVATAGR--HVNVYDLRNMSQPEQRRESSLKY-------QTRCVRCYPNGTGYALSSVEGRVAM 214 (342)
Q Consensus 144 ~~~~~v~~~s~~~~~~~~~s~d~--~v~iwd~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~s~~~~~~i 214 (342)
........++.+++.++++..++ .|.+||+.+++.. ......... ....++++|++..++++.. +...+
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l 318 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVL 318 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEE
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee-ecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEE
Confidence 22222344566677566666667 5666666544221 111110000 0345778889888888887 88877
Q ss_pred EEeechhhhhcccceeeeEEecCCCCceeeeeeEE-EEcCCCCeEEEecCCCe--EEEEeCCCcee
Q 019384 215 EFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAI-AFHPIYGTFATGGCDGF--VNVWDGNNKKR 277 (342)
Q Consensus 215 ~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v-~~sp~~~~l~sgs~Dg~--I~iWd~~~~~~ 277 (342)
+.+|..... . ..+..|. ..+..+ +++++.-.+++++.+.. |++||..+++.
T Consensus 319 ~~~d~~~~~-~--~~l~~~~---------~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 319 GILDPESGE-L--VDAAGPW---------TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEEETTTTE-E--EECCSSC---------CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEECCCCc-E--EEecCCC---------CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 777764321 1 1122221 135555 55443334455666654 55556666543
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.50 E-value=9.3e-12 Score=108.34 Aligned_cols=238 Identities=7% Similarity=0.027 Sum_probs=145.1
Q ss_pred cCCceEEEEEeCCCCeE-EEecCCcEEEEEeccCceeecc------cCCcceeEEEEe-CCCCEEEEeeC-CCcEEEEcC
Q 019384 59 HGGPVLDCCFHDDSSGF-SASADHTVRRLVFSHGKEDILG------KHDAPVRCIEYS-YAAGQVITGSW-DKSLKCWDP 129 (342)
Q Consensus 59 h~~~V~~~~~~~~~~~~-s~s~D~~i~~w~~~~~~~~~~~------~h~~~V~~~~~~-~~~~~l~sgs~-D~~I~iWd~ 129 (342)
+-..+.++++.+++.++ +.+.++.|.+|+........+. +|...+..+++. +++.++++... ++.|.+||.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~ 107 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 107 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC
Confidence 44567899998777765 4467889999987643333332 345678899995 56655555533 899999994
Q ss_pred CCCCCcceeeeeecCCCCcEEEE--eccCCeEEEEEcCCeEEEEeCCCCCCccccccc-ccceeeEEEEEeeCCceEEEE
Q 019384 130 RGASGQERTLVGTYPQPERVYSL--SLVGNRLVVATAGRHVNVYDLRNMSQPEQRRES-SLKYQTRCVRCYPNGTGYALS 206 (342)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ 206 (342)
. +. ....+.. ........+ +.+++.+++...++.|.+||.... .. ..... .....+..+++.+++..+++.
T Consensus 108 ~-g~--~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 108 Y-GQ--FVRKFGA-TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VL-HKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp T-SC--EEEEECT-TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EE-EEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred C-Cc--EEEEecC-ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EE-EEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 3 21 1111211 111223344 445555555566789999996432 11 11111 111246788999998866666
Q ss_pred ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCC-eEEEEeCCCceeeeccCCC-
Q 019384 207 SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDG-FVNVWDGNNKKRLYQYSKY- 284 (342)
Q Consensus 207 s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg-~I~iWd~~~~~~~~~~~~~- 284 (342)
..++.+ ++||.... ... .+..+ .....+..++++|+|.++++...++ .|++||.. ++.+..+..+
T Consensus 182 ~~~~~i--~~~~~~g~-~~~--~~~~~-------g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~ 248 (286)
T 1q7f_A 182 NRAHCV--KVFNYEGQ-YLR--QIGGE-------GITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKV 248 (286)
T ss_dssp GGGTEE--EEEETTCC-EEE--EESCT-------TTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESS
T ss_pred CCCCEE--EEEcCCCC-EEE--EEccC-------CccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccC
Confidence 666665 45776321 111 11110 0012367899999999888888886 99999965 4555544433
Q ss_pred -CcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccC
Q 019384 285 -PTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 285 -~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~ 327 (342)
...+.+++++|||+++++ +.+. .|.+|+..+
T Consensus 249 ~~~~~~~i~~~~~g~l~vs-~~~~-----------~v~v~~~~~ 280 (286)
T 1q7f_A 249 KHAQCFDVALMDDGSVVLA-SKDY-----------RLYIYRYVQ 280 (286)
T ss_dssp CCSCEEEEEEETTTEEEEE-ETTT-----------EEEEEECSC
T ss_pred CCCcceeEEECCCCcEEEE-CCCC-----------eEEEEEccc
Confidence 235789999999997776 4322 588887653
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.49 E-value=1.2e-11 Score=110.40 Aligned_cols=243 Identities=8% Similarity=-0.003 Sum_probs=151.5
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEe-cCCcEEEEEeccCcee-ec
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSAS-ADHTVRRLVFSHGKED-IL 96 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s-~D~~i~~w~~~~~~~~-~~ 96 (342)
......++++ ++++.++...+++|.+||..+++....+........++++++++++.+. .++.|.+||..+.+.. .+
T Consensus 43 g~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 43 GDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp BSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred CccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 3556788885 4556666777899999999988877666666778899997667776655 7899999999887643 22
Q ss_pred ccCC-----cceeEEEEeCCCCEEEEee--CCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcC----
Q 019384 97 GKHD-----APVRCIEYSYAAGQVITGS--WDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAG---- 165 (342)
Q Consensus 97 ~~h~-----~~V~~~~~~~~~~~l~sgs--~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d---- 165 (342)
.... .....+++ +++.|+.+. .+++|.++|+++.... ..+.....+ .-+.++.+++.++++..+
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~--~~i~~g~~p-~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVV--DELTIGIQP-TSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEE--EEEECSSCB-CCCEECTTSEEEEEBCCBCTTC
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEE--EEEEcCCCc-cceEEcCCCCEEEEECCCccCC
Confidence 2111 14556777 345554444 4899999998764321 112111111 123455555544444433
Q ss_pred ------CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCC
Q 019384 166 ------RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAG 239 (342)
Q Consensus 166 ------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~ 239 (342)
+.|.++|..+.+... ............++++|+++.++++.. .++.||...........+..+
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~-~~~~~~g~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~~------ 265 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEK-QFKFKLGDWPSEVQLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEFR------ 265 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEE-EEECCTTCCCEEEEECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCCC------
T ss_pred ccccCCceEEEEECCCCeEEE-EEecCCCCCceeEEEecCCCEEEEEcc----EEEEEECCCCceeeeeeecCC------
Confidence 689999998764221 111111225678999999888877654 356788754322111101100
Q ss_pred CceeeeeeEEEEcCC-CCeEEEe----cCCCeEEEEeCCCceeeeccC
Q 019384 240 RDIVYPVNAIAFHPI-YGTFATG----GCDGFVNVWDGNNKKRLYQYS 282 (342)
Q Consensus 240 ~~~~~~v~~v~~sp~-~~~l~sg----s~Dg~I~iWd~~~~~~~~~~~ 282 (342)
......++++|+ +..+++. ..+++|.+||.+ ++.+.++.
T Consensus 266 ---~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 266 ---DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp ---SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred ---CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 113678999995 5556666 678999999998 77666553
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=2.4e-11 Score=106.89 Aligned_cols=241 Identities=12% Similarity=0.118 Sum_probs=150.8
Q ss_pred CCeEEEEEcCCCCeEEE-------EeCCCcEEEEECCCceeeeeee-----cCCceEEEEEeCC-CCeEEEecCCcEEEE
Q 019384 20 DGISNLRFSNHSDHLLV-------SSWDKSVRLYDASANVLRGEFM-----HGGPVLDCCFHDD-SSGFSASADHTVRRL 86 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s-------~s~Dgti~vwd~~~~~~~~~~~-----h~~~V~~~~~~~~-~~~~s~s~D~~i~~w 86 (342)
....+++|+++++++++ +..++.|.+||..+++...... +.+.+.++++.++ +.++.++....+.+|
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence 45689999999988888 6788999999987776544332 4467889999877 777777666678889
Q ss_pred EeccCceeec-cc-----CCcceeEEEEeCCCCEEEEeeCC---------------CcEEEEcCCCCCCcceeeeeecCC
Q 019384 87 VFSHGKEDIL-GK-----HDAPVRCIEYSYAAGQVITGSWD---------------KSLKCWDPRGASGQERTLVGTYPQ 145 (342)
Q Consensus 87 ~~~~~~~~~~-~~-----h~~~V~~~~~~~~~~~l~sgs~D---------------~~I~iWd~~~~~~~~~~~~~~~~~ 145 (342)
+.. ++...+ .. ....+.++++.+++.+.++...+ +.|..||.. +. ..........
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~ 173 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVDTAFQF 173 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEEEEESS
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC--EEEeccCCCC
Confidence 887 554333 21 22458899999999877776655 567777754 21 1111111111
Q ss_pred CCcEEEEe----ccCCeEEEE-EcCCeEEEEeCCC-CCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeec
Q 019384 146 PERVYSLS----LVGNRLVVA-TAGRHVNVYDLRN-MSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDL 219 (342)
Q Consensus 146 ~~~v~~~s----~~~~~~~~~-s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~ 219 (342)
..-..++ .+++.++.+ +.++.|.+||+.. +. .... .+ +...
T Consensus 174 -~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~-------------~~~~------------------~~-~~~~ 220 (314)
T 1pjx_A 174 -PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK-------------IENK------------------KV-WGHI 220 (314)
T ss_dssp -EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE-------------EEEE------------------EE-EEEC
T ss_pred -cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCc-------------cccc------------------eE-EEEC
Confidence 1122334 333344433 3456777777531 10 0000 00 0000
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCE
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRL 299 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~ 299 (342)
..+. ...+..++++++|.++++...++.|.+||.++++.+..+..+...+.+++|+|||++
T Consensus 221 -----------~~~~--------~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 221 -----------PGTH--------EGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKT 281 (314)
T ss_dssp -----------CCCS--------SCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSE
T ss_pred -----------CCCC--------CCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCE
Confidence 0000 012457899999988888778899999999877666555555578999999999996
Q ss_pred EEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 300 LAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 300 las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
|.+++... ..|..++++
T Consensus 282 l~v~~~~~----------~~l~~~~~~ 298 (314)
T 1pjx_A 282 IFVTEHEN----------NAVWKFEWQ 298 (314)
T ss_dssp EEEEETTT----------TEEEEEECS
T ss_pred EEEEeCCC----------CeEEEEeCC
Confidence 66665432 247777664
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=2.3e-11 Score=119.49 Aligned_cols=263 Identities=8% Similarity=-0.091 Sum_probs=154.2
Q ss_pred cCCCCeEEEEeCCC---cEEEEEC--CCceeeeee-------ecCCceEEEEEeCCCCeEE--E----ecCCcEEEEEec
Q 019384 28 SNHSDHLLVSSWDK---SVRLYDA--SANVLRGEF-------MHGGPVLDCCFHDDSSGFS--A----SADHTVRRLVFS 89 (342)
Q Consensus 28 s~~~~~l~s~s~Dg---ti~vwd~--~~~~~~~~~-------~h~~~V~~~~~~~~~~~~s--~----s~D~~i~~w~~~ 89 (342)
+|+|++++-...++ .-.||.. .++...... +|...+.++.|+|+++.+. . +.+.+|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37888887666554 4556654 344332222 2444688999999887643 2 224579999999
Q ss_pred cCceeecccCCcce--eEEEEeCCCCEEEEeeCCCc-------------EEEEcCCCCCCcceeeeeecCCCCc--EEEE
Q 019384 90 HGKEDILGKHDAPV--RCIEYSYAAGQVITGSWDKS-------------LKCWDPRGASGQERTLVGTYPQPER--VYSL 152 (342)
Q Consensus 90 ~~~~~~~~~h~~~V--~~~~~~~~~~~l~sgs~D~~-------------I~iWd~~~~~~~~~~~~~~~~~~~~--v~~~ 152 (342)
+++... ..+...+ .+++|+||++.|+.++.|.. |++|++.++............+... ...+
T Consensus 156 tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 156 SGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp TCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 877431 1122222 68999999999999988876 9999987643221122222112222 3456
Q ss_pred eccCCeEEEEEcCC----eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEcc-C-CeEEEEEeechhhhhcc
Q 019384 153 SLVGNRLVVATAGR----HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSV-E-GRVAMEFFDLSEASQAK 226 (342)
Q Consensus 153 s~~~~~~~~~s~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~-~-~~~~i~~~d~~~~~~~~ 226 (342)
+.+++.+++.+.++ .|.+||..+... ........ ......+ +++. +++.+. + ....|+.||........
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~--~~l~~~~~-~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKDF--RLLVKGVG-AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSSC--EEEEECSS-CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCce--EEeecCCC-ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC
Confidence 66777787777665 566776543321 11111111 1223333 6777 555543 2 23456778875432110
Q ss_pred cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC-CceeeeccCCC-CcceEEEEECCCCCEEEEEE
Q 019384 227 KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN-NKKRLYQYSKY-PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 227 ~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~-~~~~~~~~~~~-~~~V~~v~~spdg~~las~s 304 (342)
...+..|.. ...+..++++ ++.++++...|+..+||... +++.+..+..+ ...|..++++||+..|+...
T Consensus 310 ~~~l~~~~~-------~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 310 WKEIVPEDS-------SASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVF 381 (695)
T ss_dssp CEEEECCCS-------SCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEE
T ss_pred CeEEecCCC-------CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEE
Confidence 111211110 1146778887 67788999999998888654 34455555544 56788999999998666443
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.46 E-value=1.9e-12 Score=117.52 Aligned_cols=243 Identities=10% Similarity=-0.043 Sum_probs=140.7
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee-cCCceEE-------------------EEEeCCCCeE-EE----
Q 019384 23 SNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM-HGGPVLD-------------------CCFHDDSSGF-SA---- 77 (342)
Q Consensus 23 ~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-h~~~V~~-------------------~~~~~~~~~~-s~---- 77 (342)
..+.|+|||++|+.++.++.|++||+.+++...... +.+.... +.|++++..+ .+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 347899999999999999999999998876544433 3332222 2344444432 11
Q ss_pred -ecCCcEEEEEeccCceeecccCCcceeEEEEeC-CCCEEEEeeCC------CcEEEEcCCCCCCcceeeeeecCCCCcE
Q 019384 78 -SADHTVRRLVFSHGKEDILGKHDAPVRCIEYSY-AAGQVITGSWD------KSLKCWDPRGASGQERTLVGTYPQPERV 149 (342)
Q Consensus 78 -s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~sgs~D------~~I~iWd~~~~~~~~~~~~~~~~~~~~v 149 (342)
..+..|.+|++.+++...+..+...+..++|+| +++.|+..+.+ ..|.+||+.+... .. +........+
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~-l~~~~~~~~~ 240 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--RK-IKEHAEGESC 240 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC--EE-SSCCCTTEEE
T ss_pred CCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce--eE-eeccCCCccc
Confidence 345578888988877655556777899999999 77777665543 3688888754321 11 1111101123
Q ss_pred --EEEeccCCeEEEEEcC-----CeEEEEeCCCCCCcccccccccceeeEEEEEee-CCceEEEEcc-------------
Q 019384 150 --YSLSLVGNRLVVATAG-----RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYP-NGTGYALSSV------------- 208 (342)
Q Consensus 150 --~~~s~~~~~~~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~s~------------- 208 (342)
..++.+++.++.++.+ +.|.+||+.+++..... .... .. +.++| +++.++....
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~---~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM---VMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE---ECCS-EE-EEEECSSSSEEEEEECCC----------C
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee---eCCC-CC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 3566667777776554 34999999876422111 1111 12 67888 9987776432
Q ss_pred -CCeEEEEEeechhhhhcccceeeeEEecCCC--CceeeeeeEEEEcCCCCeEEEecC-CCeEEEE--eCCCce
Q 019384 209 -EGRVAMEFFDLSEASQAKKYAFKCHRKSEAG--RDIVYPVNAIAFHPIYGTFATGGC-DGFVNVW--DGNNKK 276 (342)
Q Consensus 209 -~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~--~~~~~~v~~v~~sp~~~~l~sgs~-Dg~I~iW--d~~~~~ 276 (342)
++...+++||...... ..+..+...... .+....+..++|+|+|+.|+.++. ++...|| ++.++.
T Consensus 316 ~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSA---QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCCEEEEEETTTTBC---CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred cCCCCcEEEEecccCce---EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 2334677898754321 122222110000 000001345789999998876654 5555555 544443
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=2.1e-10 Score=109.51 Aligned_cols=277 Identities=14% Similarity=0.027 Sum_probs=164.3
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECC--CceeeeeeecCCceEEEEEe----CCCCe-EEE-ecCCcEEEEEecc
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDAS--ANVLRGEFMHGGPVLDCCFH----DDSSG-FSA-SADHTVRRLVFSH 90 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~--~~~~~~~~~h~~~V~~~~~~----~~~~~-~s~-s~D~~i~~w~~~~ 90 (342)
...+..++|||||++|.+++.|+.|.+||+. +.+....+........+.|+ ++++. +++ -.++.+.++|..+
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 3467899999999999999999999999995 55555555445567889998 47754 444 4568899999877
Q ss_pred Ccee-ec--cc--------C-CcceeEEEEeCCCCE-EEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCC
Q 019384 91 GKED-IL--GK--------H-DAPVRCIEYSYAAGQ-VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGN 157 (342)
Q Consensus 91 ~~~~-~~--~~--------h-~~~V~~~~~~~~~~~-l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~ 157 (342)
.+.. .+ .+ | ...+..+..++++.. +++...++.|.++|...........+.. .....-..++.++.
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~-~~~~~d~~~~pdgr 354 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA-ERFLHDGGLDGSHR 354 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-CSSEEEEEECTTSC
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec-cccccCceECCCCC
Confidence 6632 11 11 2 225778888887654 4566677999999976432111111111 11111235667777
Q ss_pred eEEEEE-cCCeEEEEeCCCCCCcccccc-cccceeeEEE-EEeeCCceEEEEc--cCCeEEEEEeechhhhhc-ccceee
Q 019384 158 RLVVAT-AGRHVNVYDLRNMSQPEQRRE-SSLKYQTRCV-RCYPNGTGYALSS--VEGRVAMEFFDLSEASQA-KKYAFK 231 (342)
Q Consensus 158 ~~~~~s-~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~v-~~~~~~~~~~~~s--~~~~~~i~~~d~~~~~~~-~~~~~~ 231 (342)
+++++. .+++|.++|+.+++....... ...+...... .++|++..+++.+ .++.+ .++|....... ..+...
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~V--svid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSV--ALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEE--EEEECCTTTCTTTBTSEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeE--EEecCCCCCCccccCEEE
Confidence 766554 668999999988643211111 0111100111 2577755554433 33554 56887542110 111111
Q ss_pred eEEecCCCCceeeeeeEEEEcCCCCeEEEecC-------CCeEEEEeCCCc---------eeee-----ccCCCCcceEE
Q 019384 232 CHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC-------DGFVNVWDGNNK---------KRLY-----QYSKYPTSIAA 290 (342)
Q Consensus 232 ~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~-------Dg~I~iWd~~~~---------~~~~-----~~~~~~~~V~~ 290 (342)
...+.. +. .-.-+++||++++|+.... .++|.|+|+.+. +.+. .+..-..++..
T Consensus 433 ~~i~~~-g~----g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (567)
T 1qks_A 433 DSFPAL-GG----GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQ 507 (567)
T ss_dssp EEEECS-CS----CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEE
T ss_pred EEEecC-CC----CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEe
Confidence 111110 10 1123678999999887652 459999998866 2221 12222457999
Q ss_pred EEECCCCCEEEEE
Q 019384 291 LSFSRDGRLLAVA 303 (342)
Q Consensus 291 v~~spdg~~las~ 303 (342)
++|+|||+++-.+
T Consensus 508 ~~~~~~G~~~~~s 520 (567)
T 1qks_A 508 GEFNKDGTEVWFS 520 (567)
T ss_dssp EEECTTSSEEEEE
T ss_pred eeECCCCCEEEEE
Confidence 9999999987765
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.44 E-value=7.6e-10 Score=96.26 Aligned_cols=263 Identities=8% Similarity=-0.011 Sum_probs=165.1
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee--ecCCceEEEEEeCCCCeEEEec-CCcEEEEEeccCceee
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF--MHGGPVLDCCFHDDSSGFSASA-DHTVRRLVFSHGKEDI 95 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~--~h~~~V~~~~~~~~~~~~s~s~-D~~i~~w~~~~~~~~~ 95 (342)
...+.+++++++|+..++...++.|.+||.. ++..... .+...+.++++.+++.++.+.. ++.|..++.. +....
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4688999999999988887788999999988 5443321 2335688899987777765554 6778888876 44332
Q ss_pred c--ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec--cCCeEEEEEcCCeEEEE
Q 019384 96 L--GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATAGRHVNVY 171 (342)
Q Consensus 96 ~--~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~~~~~s~d~~v~iw 171 (342)
+ ......+.++++.+++..+++...++.|..+|.. +.. . .+...........+.. +++..++...++.|..+
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI--Y-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE--E-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 2 2234678999999988888877778899999975 221 1 1111111223444444 44444444446789999
Q ss_pred eCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEE
Q 019384 172 DLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAF 251 (342)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~ 251 (342)
|. ++.... .........+..+.+.+++..+++....+.+ ..+|.. . ....+.+.. . ...+.++++
T Consensus 173 ~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i--~~~~~~-g-~~~~~~~~~------~---~~~~~~i~~ 237 (300)
T 2qc5_A 173 TN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKI--GRITTT-G-EISEYDIPT------P---NARPHAITA 237 (300)
T ss_dssp CT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEE--EEECTT-C-CEEEEECSS------T---TCCEEEEEE
T ss_pred CC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEE--EEEcCC-C-cEEEEECCC------C---CCCceEEEE
Confidence 98 432211 1111111246678888888765555555544 457752 1 111111110 0 123678999
Q ss_pred cCCCCeEEEecCCCeEEEEeCCCceee-eccCCCCcceEEEEECCCCCEEEEE
Q 019384 252 HPIYGTFATGGCDGFVNVWDGNNKKRL-YQYSKYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 252 sp~~~~l~sgs~Dg~I~iWd~~~~~~~-~~~~~~~~~V~~v~~spdg~~las~ 303 (342)
+++|..+++...++.|..||.. ++.. ..+......+.+++++++|+++++.
T Consensus 238 d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 238 GKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred CCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence 9999877777778999999984 4322 2233344568999999999977654
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.42 E-value=1.9e-10 Score=102.23 Aligned_cols=236 Identities=11% Similarity=0.075 Sum_probs=141.8
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee-ecCCceEEEEEeCCCCeEEEec-C----CcEEEEEeccC
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF-MHGGPVLDCCFHDDSSGFSASA-D----HTVRRLVFSHG 91 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~-~h~~~V~~~~~~~~~~~~s~s~-D----~~i~~w~~~~~ 91 (342)
+...+.+++|++++++++++..++.|.+||..+++..... .+...+.++++.+++.++.++. + +.|.+|+..++
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 4457789999999998888889999999999887665543 4667899999998887765554 4 47888888776
Q ss_pred cee-ecc--cCCcceeEEEEeCCCCEEEEeeC------CCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEE
Q 019384 92 KED-ILG--KHDAPVRCIEYSYAAGQVITGSW------DKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVA 162 (342)
Q Consensus 92 ~~~-~~~--~h~~~V~~~~~~~~~~~l~sgs~------D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~ 162 (342)
... .+. .+...+.+++++|++..+++... .+.|..+|.++.. ......... ....+.++.+++.++.+
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNIS-VANGIALSTDEKVLWVT 199 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEES-SEEEEEECTTSSEEEEE
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EEEeecCCC-cccceEECCCCCEEEEE
Confidence 643 222 34567899999999987776654 2456666654321 111111111 11223445555555444
Q ss_pred -EcCCeEEEEeCCCC-CCccc---ccccccc--eeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 163 -TAGRHVNVYDLRNM-SQPEQ---RRESSLK--YQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 163 -s~d~~v~iwd~~~~-~~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
+.++.|.+||+... ..... ....... ..+..+++.+++..++....++.+ .+||.. ......+ ..+..
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v--~~~d~~-g~~~~~~--~~~~~ 274 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV--LVFNKR-GYPIGQI--LIPGR 274 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE--EEECTT-SCEEEEE--ECTTG
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEE--EEECCC-CCEEEEE--EcCCC
Confidence 45689999998642 11110 0000011 245678888998866665555654 457763 2111111 11000
Q ss_pred cCCCCceeeeeeEEEEcCCCCeEEEecCC
Q 019384 236 SEAGRDIVYPVNAIAFHPIYGTFATGGCD 264 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~~l~sgs~D 264 (342)
...+...+.+++|+|+++.|+.++.+
T Consensus 275 ---~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 275 ---DEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ---GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ---ccccccCcceEEECCCCCEEEEEeCc
Confidence 00011136789999998777655544
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.40 E-value=1.2e-10 Score=101.21 Aligned_cols=212 Identities=10% Similarity=-0.046 Sum_probs=134.0
Q ss_pred CCCCeEEEEeCCCcEEEEECCCceeeeeee-cC-CceEEEEEeCCCCeEEEecCCcEEEEEeccCce-eecccC-Cccee
Q 019384 29 NHSDHLLVSSWDKSVRLYDASANVLRGEFM-HG-GPVLDCCFHDDSSGFSASADHTVRRLVFSHGKE-DILGKH-DAPVR 104 (342)
Q Consensus 29 ~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-h~-~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~-~~~~~h-~~~V~ 104 (342)
..+++|++++.|+.|.+||..+++.+..+. +. ..+.++.+.+++.++. +.++.+..|+. +++. -.+..+ ...+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 456889999999999999998887666554 33 3688899998888776 56788888887 5542 223322 34688
Q ss_pred EEEEeCCCCEEEEeeC-CCcEEEEcCCCCCCcceeeeeecC------CCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCC
Q 019384 105 CIEYSYAAGQVITGSW-DKSLKCWDPRGASGQERTLVGTYP------QPERVYSLSLVGNRLVVATAGRHVNVYDLRNMS 177 (342)
Q Consensus 105 ~~~~~~~~~~l~sgs~-D~~I~iWd~~~~~~~~~~~~~~~~------~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~ 177 (342)
++.+.++++.+++.+. ++.|..+|.. +.. ...+.... ..........+++.+++.+.++.|..||.. +
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~--l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G- 155 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK-GEV--LSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G- 155 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT-SCE--EEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S-
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC-CCE--EEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C-
Confidence 9999999999988777 6677777752 111 11110000 000011222333344433334444444432 1
Q ss_pred CcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCe
Q 019384 178 QPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGT 257 (342)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~ 257 (342)
+ ..+.+..+ ..+.++.+.++|+.
T Consensus 156 ---------------------------------------------~--~~w~~~~~----------~~~~~~~~~~~g~~ 178 (276)
T 3no2_A 156 ---------------------------------------------Q--LLNSVKLS----------GTPFSSAFLDNGDC 178 (276)
T ss_dssp ---------------------------------------------C--EEEEEECS----------SCCCEEEECTTSCE
T ss_pred ---------------------------------------------C--EEEEEECC----------CCccceeEcCCCCE
Confidence 1 11111110 02345677889999
Q ss_pred EEEecCCCeEEEEeCCCceeeeccCCC------CcceEEEEECCCCCEEEEEE
Q 019384 258 FATGGCDGFVNVWDGNNKKRLYQYSKY------PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 258 l~sgs~Dg~I~iWd~~~~~~~~~~~~~------~~~V~~v~~spdg~~las~s 304 (342)
|++++.++.|..+|.++++.+.++... ...+..++..++|.++++..
T Consensus 179 ~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 179 LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999998899999999988887766422 23478999999999888764
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=5.1e-11 Score=117.89 Aligned_cols=263 Identities=14% Similarity=0.015 Sum_probs=151.0
Q ss_pred cCCCCeEEEEeCCCc---EEEEECC-----Cceeeeee-------ecCCceEEEEEeCCCCeE-EEec-C----CcEEEE
Q 019384 28 SNHSDHLLVSSWDKS---VRLYDAS-----ANVLRGEF-------MHGGPVLDCCFHDDSSGF-SASA-D----HTVRRL 86 (342)
Q Consensus 28 s~~~~~l~s~s~Dgt---i~vwd~~-----~~~~~~~~-------~h~~~V~~~~~~~~~~~~-s~s~-D----~~i~~w 86 (342)
+|+|++++-...++. -.||... ++.....+ .|...+.++.|+|+++.+ .++. + ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 388998886665543 5666643 33322221 233367889999888754 3332 2 359999
Q ss_pred EeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCc--------------EEEEcCCCCCCcceeeeeecCCCCcE--E
Q 019384 87 VFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKS--------------LKCWDPRGASGQERTLVGTYPQPERV--Y 150 (342)
Q Consensus 87 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~--------------I~iWd~~~~~~~~~~~~~~~~~~~~v--~ 150 (342)
|+.+++......+...+..++|+|| +.|+.++.|+. |.+|++.++................+ .
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9988875332222223467899999 88888777654 88999865432112222221121123 3
Q ss_pred EEeccCCeEEEEEcCC-----eEEEEeCCCCCCc-ccccccccceeeEEEEEeeCCceEEEEccCC--eEEEEEeechhh
Q 019384 151 SLSLVGNRLVVATAGR-----HVNVYDLRNMSQP-EQRRESSLKYQTRCVRCYPNGTGYALSSVEG--RVAMEFFDLSEA 222 (342)
Q Consensus 151 ~~s~~~~~~~~~s~d~-----~v~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~--~~~i~~~d~~~~ 222 (342)
.++.+++.++..+.++ .|.+||+.++... .......... .... ++|+++.+++.+..+ ...|+.||....
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA-QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 4566777777777544 7999998765111 1111111111 1222 358888877776432 345677887532
Q ss_pred hhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCC-CceeeeccCC-CCcceEEEEECCCCCEE
Q 019384 223 SQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGN-NKKRLYQYSK-YPTSIAALSFSRDGRLL 300 (342)
Q Consensus 223 ~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~-~~~~~~~~~~-~~~~V~~v~~spdg~~l 300 (342)
. .....+..+.. ..+..++++ ++.++++...|+..+||... +++.+..+.. ....|..++++||+..|
T Consensus 352 ~-~~~~~l~~~~~--------~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 352 T-PRFDTVVPESK--------DNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHA 421 (741)
T ss_dssp S-CEEEEEECCCS--------SEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCE
T ss_pred c-cccEEEecCCC--------CeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEE
Confidence 1 00011111111 135667777 56678888999988877544 3445555553 35678999999999865
Q ss_pred EEE
Q 019384 301 AVA 303 (342)
Q Consensus 301 as~ 303 (342)
+..
T Consensus 422 ~~~ 424 (741)
T 1yr2_A 422 YLS 424 (741)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.39 E-value=2.4e-10 Score=109.13 Aligned_cols=265 Identities=13% Similarity=0.084 Sum_probs=159.7
Q ss_pred cCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEec--cCcee-ecccCCcce
Q 019384 28 SNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFS--HGKED-ILGKHDAPV 103 (342)
Q Consensus 28 s~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~--~~~~~-~~~~h~~~V 103 (342)
++.+..+++...|++|.++|..++++...+.....+..+.|+++++ +++++.|+.|.+||+. +.+.. .+.. ....
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P 242 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEA 242 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCC
Confidence 3445567788899999999999988877776666788999998776 4678889999999985 44422 2222 2345
Q ss_pred eEEEEe----CCCCEEEEe-eCCCcEEEEcCCCCCCcceeeeeec--C----C-CCcEEEEe--ccCC-eEEEEEcCCeE
Q 019384 104 RCIEYS----YAAGQVITG-SWDKSLKCWDPRGASGQERTLVGTY--P----Q-PERVYSLS--LVGN-RLVVATAGRHV 168 (342)
Q Consensus 104 ~~~~~~----~~~~~l~sg-s~D~~I~iWd~~~~~~~~~~~~~~~--~----~-~~~v~~~s--~~~~-~~~~~s~d~~v 168 (342)
..++|+ |||++++.+ ..+++|.++|..+.+.......... . + ..++..+. ..+. .++....++.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 789999 699887655 5558999999765432111111110 0 0 11233333 2222 44555566899
Q ss_pred EEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 169 NVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
.++|........... .........+.++|++++++++. .+++ +.++|..+.+....... .....+ +-.
T Consensus 323 ~~vd~~~~~~~~v~~-i~~~~~~~d~~~~pdgr~~~va~~~sn~--V~ViD~~t~kl~~~i~v------gg~~Ph--pg~ 391 (567)
T 1qks_A 323 LLVDYTDLNNLKTTE-ISAERFLHDGGLDGSHRYFITAANARNK--LVVIDTKEGKLVAIEDT------GGQTPH--PGR 391 (567)
T ss_dssp EEEETTCSSEEEEEE-EECCSSEEEEEECTTSCEEEEEEGGGTE--EEEEETTTTEEEEEEEC------SSSSBC--CTT
T ss_pred EEEecCCCccceeee-eeccccccCceECCCCCEEEEEeCCCCe--EEEEECCCCcEEEEEec------cCcCCC--Ccc
Confidence 999987643211111 01112234677899999887765 3444 45689865422111110 001111 111
Q ss_pred EEE-EcCCCCe-EEEec-CCCeEEEEeCCC-------ceeeeccCCCCcceEEEEECCCCCEEEEEE
Q 019384 248 AIA-FHPIYGT-FATGG-CDGFVNVWDGNN-------KKRLYQYSKYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 248 ~v~-~sp~~~~-l~sgs-~Dg~I~iWd~~~-------~~~~~~~~~~~~~V~~v~~spdg~~las~s 304 (342)
.+. ++|++.. ++++. .+++|.++|..+ .+.++++......-.-+.++||+++|-+..
T Consensus 392 g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 392 GANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred ceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 222 5887554 45553 468999999887 455666554333334577899999887654
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.37 E-value=4.3e-09 Score=95.42 Aligned_cols=283 Identities=11% Similarity=-0.041 Sum_probs=160.2
Q ss_pred EEcCCCCeEEEEeC--CC---cEEEEECCCceeeeeeecCCceEEEEEeCCCCeE-EEe----------cCCcEEEEEec
Q 019384 26 RFSNHSDHLLVSSW--DK---SVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGF-SAS----------ADHTVRRLVFS 89 (342)
Q Consensus 26 ~fs~~~~~l~s~s~--Dg---ti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~-s~s----------~D~~i~~w~~~ 89 (342)
...|+++++..+.. .. +|.++|..++++...+.-...- .+.++++++.+ .+. .++.|.++|..
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 44577777666543 22 8999999988776554333333 89999887654 443 26778999987
Q ss_pred cCcee-e--cc--c---CCcceeEEEEeCCCCEEEEeeC--CCcEEEEcCCCCCCcceeeeee-cCCCCcEEEEecc-CC
Q 019384 90 HGKED-I--LG--K---HDAPVRCIEYSYAAGQVITGSW--DKSLKCWDPRGASGQERTLVGT-YPQPERVYSLSLV-GN 157 (342)
Q Consensus 90 ~~~~~-~--~~--~---h~~~V~~~~~~~~~~~l~sgs~--D~~I~iWd~~~~~~~~~~~~~~-~~~~~~v~~~s~~-~~ 157 (342)
+.+.. . +. . +...-..++|+||+++|+.+.. ++.|.++| .+... ... ......+ .+... +.
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~-----~~~~i~~~~~~-~~~~~~~~ 178 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS-----DDQLLSSPTCY-HIHPGAPS 178 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE-----EeEEcCCCceE-EEEeCCCc
Confidence 76532 1 11 1 1123457899999999987764 57899999 76432 222 2222222 23333 34
Q ss_pred eEEEEEcCCeEEEEeCCCCCCcccccc-cc-cc-ee-eEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc--ccceee
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRE-SS-LK-YQ-TRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA--KKYAFK 231 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~-~~-~~-~~-~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~--~~~~~~ 231 (342)
.+++.+.|+++..+|. +++....... .. .. .. .....+.+++..++..+..+. +..+|....... ..+.+.
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--v~vid~~~~~~~v~~~~~~~ 255 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK--ILQADISAAGATNKAPIDAL 255 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce--EEEEeccCCcceEeeeeeec
Confidence 5677788899999999 6533211000 00 00 00 111234555555544445554 455776432111 111110
Q ss_pred eEEecCCCCceeeeeeEEEEcCCCCeEEEecC----------CCeEEEEeCCCceeeeccCCCCcceEEEEECCCCC-EE
Q 019384 232 CHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC----------DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGR-LL 300 (342)
Q Consensus 232 ~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~----------Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~-~l 300 (342)
.......+ -.......++++|+++.|..+.. ++.|.++|..+++.+.++. -....++++|+|||+ +|
T Consensus 256 ~~~~~~~~-~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 256 SGGRKADT-WRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDL 333 (373)
T ss_pred CCcccccc-eecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEE
Confidence 00000000 00112344789999888766543 3589999999998887774 233579999999999 56
Q ss_pred EEEEeccccCCCCCCCCCcEEEEEccCCccc
Q 019384 301 AVASSYTFEEGDKPHEPDAIFVRSVNEIEVK 331 (342)
Q Consensus 301 as~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (342)
.++.... +.+.++......+.
T Consensus 334 ~v~~~~~----------~~V~ViD~~t~~vv 354 (373)
T 2mad_H 334 YALSAGT----------EVLHIYDAGAGDQD 354 (373)
T ss_pred EEEcCCC----------CeEEEEECCCCCEE
Confidence 6544211 24666666544443
No 197
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=2.4e-10 Score=102.50 Aligned_cols=258 Identities=11% Similarity=0.075 Sum_probs=159.1
Q ss_pred CCeEEEEEcCCCCeEEEEe--CCCcEEEEECCCceeeee-------eecCCceEEEEEeCCCCeEEEec------CCcEE
Q 019384 20 DGISNLRFSNHSDHLLVSS--WDKSVRLYDASANVLRGE-------FMHGGPVLDCCFHDDSSGFSASA------DHTVR 84 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s--~Dgti~vwd~~~~~~~~~-------~~h~~~V~~~~~~~~~~~~s~s~------D~~i~ 84 (342)
..+..|+++++|+.+++.. .++.++||.+.++++... ..|-..+.++++.+++.++.+.. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 6889999999999998864 234467776655554321 12446789999988777765442 57888
Q ss_pred EEEeccCc-eeecc------cCCcceeEEEEeCCCCEE-EEee---CCCcEEEEcCCCCCCcceeeeeecCC--CCcEEE
Q 019384 85 RLVFSHGK-EDILG------KHDAPVRCIEYSYAAGQV-ITGS---WDKSLKCWDPRGASGQERTLVGTYPQ--PERVYS 151 (342)
Q Consensus 85 ~w~~~~~~-~~~~~------~h~~~V~~~~~~~~~~~l-~sgs---~D~~I~iWd~~~~~~~~~~~~~~~~~--~~~v~~ 151 (342)
+||+.+++ ...+. .+...+..+++.+++..+ ++-+ .++.|.+||+.++.. ...+..+.. ... ..
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~--~r~~~~~~~~~~~~-~~ 173 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA--ARVLQGYPGIAPED-ID 173 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE--EEECTTCTTTSCCS-CC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE--EEEecCCCcccccc-cc
Confidence 99988776 33222 233457899999865554 5555 678999999865321 111111100 001 12
Q ss_pred EeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhh-------
Q 019384 152 LSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQ------- 224 (342)
Q Consensus 152 ~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~------- 224 (342)
+..++..+.+...+++++.|.. ....++++|+++.++++...+. .++.++......
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~----------------~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHL----------------GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp CEETTEECBEECTTSCEECCCC----------------CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHH
T ss_pred eeECCEEEEeccCCCceeceec----------------ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhh
Confidence 3334444555556666554421 2467889999988887766554 444555421110
Q ss_pred -cccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC-CCcceEEEEECCCCCEEEE
Q 019384 225 -AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK-YPTSIAALSFSRDGRLLAV 302 (342)
Q Consensus 225 -~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las 302 (342)
...+...++.. ....++++++|.++++...++.|.+||.++++....... +.....+++|.+||+++++
T Consensus 237 ~~~~~~~~g~~g---------~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 237 LGSKIERYSEKP---------ICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp HHTTCEEEEECC---------SCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred hhcceEecccCC---------CCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEE
Confidence 00011111111 245789999999999999999999999855543222211 2346899999999998887
Q ss_pred EEec
Q 019384 303 ASSY 306 (342)
Q Consensus 303 ~s~~ 306 (342)
.+..
T Consensus 308 ~~~~ 311 (343)
T 2qe8_A 308 CNQL 311 (343)
T ss_dssp ECCG
T ss_pred eCcc
Confidence 7653
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.34 E-value=1e-09 Score=99.09 Aligned_cols=269 Identities=13% Similarity=0.023 Sum_probs=158.1
Q ss_pred EEEEcCCCCeEEEEeC-----CCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEe----------cCCcEEEEE
Q 019384 24 NLRFSNHSDHLLVSSW-----DKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSAS----------ADHTVRRLV 87 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s~-----Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s----------~D~~i~~w~ 87 (342)
.....|+++.+..... +++|.+.|..+.+....+.-..... +.++++++ ++.+. .++.|.+||
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 4556789988877654 7899999999988776654433334 89998776 44544 356799999
Q ss_pred eccCcee-ec--cc-----CCcceeEEEEeCCCCEEEEeeC--CCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCC
Q 019384 88 FSHGKED-IL--GK-----HDAPVRCIEYSYAAGQVITGSW--DKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGN 157 (342)
Q Consensus 88 ~~~~~~~-~~--~~-----h~~~V~~~~~~~~~~~l~sgs~--D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~ 157 (342)
..+.+.. .+ .. ....-..++|+|||++++.+.. +++|.++|+.+... ......+...........
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v-----v~tI~v~g~~~~~P~g~~ 190 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF-----KRMLDVPDCYHIFPTAPD 190 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE-----EEEEECCSEEEEEEEETT
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE-----EEEEECCCcceeecCCCc
Confidence 9887732 22 11 1224557899999998877653 68999999876432 222222222111222345
Q ss_pred eEEEEEcCCeEEEEeCCC-CCCcccccccccc---eee-EEEEEe-eCCceEEEEccCCeEEEEEeechhhhh--cccce
Q 019384 158 RLVVATAGRHVNVYDLRN-MSQPEQRRESSLK---YQT-RCVRCY-PNGTGYALSSVEGRVAMEFFDLSEASQ--AKKYA 229 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~---~~~-~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~--~~~~~ 229 (342)
.+++.+.||++.+.++.. ++.. ......+. ..+ ....+. ++|+.+ ..+.++++ +.+|...... ...+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~-~~~~~~~~~~~~~~~~~~~~~~~dG~~~-~vs~~g~V--~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPE-ITHTEVFHPEDEFLINHPAYSQKAGRLV-WPTYTGKI--HQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCE-EEECCCCSCTTSCBCSCCEEETTTTEEE-EEBTTSEE--EEEECTTSSCEECCCEE
T ss_pred eeEEECCCCCEEEEECCCCCeEE-EeecceeccccccccccceeEcCCCcEE-EEeCCCEE--EEEECCCCcceeeccee
Confidence 677888888888888875 3321 11100110 000 112333 455433 45556654 5578754321 11111
Q ss_pred eeeEEecCCCCceeeeeeEEEEcCCCCeEEEecC----------CCeEEEEeCCCceeeeccCCCCcceEEEEECCCCC-
Q 019384 230 FKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC----------DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGR- 298 (342)
Q Consensus 230 ~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~----------Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~- 298 (342)
+..-.....+ -.......++++|+++.+..... ..+|.+.|..+++.+.++.- ..++++|+|+||++
T Consensus 267 ~~~~~~~~~g-~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~ 344 (386)
T 3sjl_D 267 ALTEAERADG-WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKP 344 (386)
T ss_dssp SSCHHHHHTT-EEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSC
T ss_pred cccccccccc-ccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCe
Confidence 0000000000 00112445788999888766532 25799999999988876642 24789999999997
Q ss_pred EEEEEE
Q 019384 299 LLAVAS 304 (342)
Q Consensus 299 ~las~s 304 (342)
+|.++.
T Consensus 345 ~ly~tn 350 (386)
T 3sjl_D 345 LLYALS 350 (386)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 666554
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.32 E-value=9.4e-10 Score=99.32 Aligned_cols=255 Identities=13% Similarity=0.031 Sum_probs=152.9
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEECCCceeeeeeec--------CCceEEEEEeCCCCe-EEEec--CCc
Q 019384 24 NLRFSNHSDHLLVSS----------WDKSVRLYDASANVLRGEFMH--------GGPVLDCCFHDDSSG-FSASA--DHT 82 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s----------~Dgti~vwd~~~~~~~~~~~h--------~~~V~~~~~~~~~~~-~s~s~--D~~ 82 (342)
.+++||||++|..+. .+++|.+||..+.+....+.- ......+.|+++++. +.+.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 499999999887665 368999999998876655421 124567899987765 44542 688
Q ss_pred EEEEEeccCcee-ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC-CCCcE---EEEeccCC
Q 019384 83 VRRLVFSHGKED-ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYP-QPERV---YSLSLVGN 157 (342)
Q Consensus 83 i~~w~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~-~~~~v---~~~s~~~~ 157 (342)
|.++|..+.+.. .+..-. . ...+......+++.+.||++-+.++............... ....+ ..+.....
T Consensus 162 VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999888742 221111 0 1223223456778888999888887642221110000000 00111 12332233
Q ss_pred eEEEEEcCCeEEEEeCCCCCCcccccc---------ccc-ceeeEEEEEeeCCceEEEEcc--------CCeEEEEEeec
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRE---------SSL-KYQTRCVRCYPNGTGYALSSV--------EGRVAMEFFDL 219 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~---------~~~-~~~~~~v~~~~~~~~~~~~s~--------~~~~~i~~~d~ 219 (342)
.++..+.+++|.+.|+........... ... +.....++++++++.+++... +....++++|.
T Consensus 239 ~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~ 318 (386)
T 3sjl_D 239 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA 318 (386)
T ss_dssp EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC
Confidence 566688899999999976532111100 000 011123566788887776643 12346778998
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCC-eEEE-ecCCCeEEEEeCCCceeeeccC--CCCcceEEEEECC
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFAT-GGCDGFVNVWDGNNKKRLYQYS--KYPTSIAALSFSR 295 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~s-gs~Dg~I~iWd~~~~~~~~~~~--~~~~~V~~v~~sp 295 (342)
.+.+..+.+.+. ..+..|+|+||++ +|++ ...+++|.++|..+++.+.++. +|. +.|.+++
T Consensus 319 ~t~kv~~~i~vg------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p---~~l~~s~ 383 (386)
T 3sjl_D 319 KTGERLAKFEMG------------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG---PQVITTA 383 (386)
T ss_dssp TTCCEEEEEEEE------------EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS---CCEEEEC
T ss_pred CCCeEEEEEECC------------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC---ceeEECC
Confidence 654433333221 2477899999996 5555 5669999999999999887665 343 4566777
Q ss_pred C
Q 019384 296 D 296 (342)
Q Consensus 296 d 296 (342)
|
T Consensus 384 d 384 (386)
T 3sjl_D 384 D 384 (386)
T ss_dssp C
T ss_pred c
Confidence 6
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.32 E-value=2.6e-09 Score=93.61 Aligned_cols=229 Identities=11% Similarity=0.042 Sum_probs=136.0
Q ss_pred CeEEEEEcCCC-CeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeeccc-
Q 019384 21 GISNLRFSNHS-DHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGK- 98 (342)
Q Consensus 21 ~V~~l~fs~~~-~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~- 98 (342)
---...|++++ .++++...+++|..||..++... .....+.+.++++.+++.++.+. +..|.+|+..++....+..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEEC
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEec
Confidence 34578899965 45667778899999999876543 34456789999999888876665 6678899988776443321
Q ss_pred ----CCcceeEEEEeCCCCEEEEeeCC---------CcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEE-EEEc
Q 019384 99 ----HDAPVRCIEYSYAAGQVITGSWD---------KSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLV-VATA 164 (342)
Q Consensus 99 ----h~~~V~~~~~~~~~~~l~sgs~D---------~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~-~~s~ 164 (342)
....++.+++.|+|.+.++...+ ..-++|.+... +........... ..-+.++.+++.++ +.+.
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~-pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDI-SNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESB-EEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecccc-ccceEEcCCCCEEEEecCC
Confidence 22457889999999866654322 22233333211 111111111100 11122333333332 2233
Q ss_pred CCeEEEEeCC--CCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCce
Q 019384 165 GRHVNVYDLR--NMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDI 242 (342)
Q Consensus 165 d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~ 242 (342)
++.|..||+. ++.. . . . . .+.+... .
T Consensus 170 ~~~i~~~~~d~~~G~~---------~-~-~--------------------~-~~~~~~~--------------------~ 197 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQI---------S-N-R--------------------R-SVYKLEK--------------------E 197 (297)
T ss_dssp GTEEEEEEECTTTCCE---------E-E-E--------------------E-EEEECCG--------------------G
T ss_pred CCcEEEEeccCCCCcc---------c-C-c--------------------E-EEEECCC--------------------C
Confidence 4455555542 1100 0 0 0 0 0011100 0
Q ss_pred eeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEEC-CCCCEEEEEEe
Q 019384 243 VYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFS-RDGRLLAVASS 305 (342)
Q Consensus 243 ~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~s-pdg~~las~s~ 305 (342)
......+++.++|.++++...++.|.+||.++++.+..+..+...+.+++|+ ||++.|.+++.
T Consensus 198 ~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 198 EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 0135678899999877777778899999999888887777666789999998 99987766665
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.29 E-value=4.9e-10 Score=110.03 Aligned_cols=245 Identities=13% Similarity=0.045 Sum_probs=146.2
Q ss_pred CCCCCCCeEEEEEcCCCCeEE-----EEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCc------
Q 019384 15 GNPPSDGISNLRFSNHSDHLL-----VSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHT------ 82 (342)
Q Consensus 15 ~~~~~~~V~~l~fs~~~~~l~-----s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~------ 82 (342)
.+.+...+..++|||||++|| +|+.+.+|+|||+.+++.+....+......++|+ |++ ++.++.+..
T Consensus 124 a~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 124 SPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp STTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred cCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 344556788999999999988 3444478999999988755432221113567888 654 566666643
Q ss_pred -------EEEEEeccCce---eecc--c-CCcceeEEEEeCCCCEEE-Eee---CCCcEEEEcCCCCCCcceeeeeecCC
Q 019384 83 -------VRRLVFSHGKE---DILG--K-HDAPVRCIEYSYAAGQVI-TGS---WDKSLKCWDPRGASGQERTLVGTYPQ 145 (342)
Q Consensus 83 -------i~~w~~~~~~~---~~~~--~-h~~~V~~~~~~~~~~~l~-sgs---~D~~I~iWd~~~~~~~~~~~~~~~~~ 145 (342)
|.+|++.+... .++. . |...+.++.|+||++.|+ +.+ .+..|.+||+.++..... .+.....
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~-~l~~~~~ 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL-TVQGDLD 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-EEECSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-EEeCCCC
Confidence 88888876542 2222 2 344578899999999774 332 235899999876433222 2222111
Q ss_pred CCcEEEEeccCCeEEEEEcC----CeEEEEeCCCCCCcc-cccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeec
Q 019384 146 PERVYSLSLVGNRLVVATAG----RHVNVYDLRNMSQPE-QRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDL 219 (342)
Q Consensus 146 ~~~v~~~s~~~~~~~~~s~d----~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~ 219 (342)
.....++.+++.++..+.. ..|..+|+.+..... +..... ..... .++++++.++... .++...|++||.
T Consensus 282 -~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 282 -ADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-RQQVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp -SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred -ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-CCCEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 1122256667776655543 468899998753211 111111 11222 6788888776554 566667788887
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCC----CeEEEEeCCCce
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCD----GFVNVWDGNNKK 276 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~D----g~I~iWd~~~~~ 276 (342)
... ......+. ....+..+.++|++..|+....+ ++|+.||+.+++
T Consensus 358 ~g~-~~~~l~~p----------~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 358 EGK-RVREVALP----------GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TSC-EEEEECCS----------SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCC-eeEEeecC----------CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 522 11111110 01135566778888877655444 789999987654
No 202
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.29 E-value=2.6e-10 Score=101.51 Aligned_cols=115 Identities=8% Similarity=-0.019 Sum_probs=83.1
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce-eeeee----------ecCCceEEEEEeC-CCCeEEEe--cCCc
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV-LRGEF----------MHGGPVLDCCFHD-DSSGFSAS--ADHT 82 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~-~~~~~----------~h~~~V~~~~~~~-~~~~~s~s--~D~~ 82 (342)
.+-.....|+|+++|+++++...+++|++||..... ....+ .+-..+.++++.+ ++.++.+. .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 344578899999999999999999999999987652 22222 2334688999987 77776554 4888
Q ss_pred EEEEEeccCceeeccc----------CCcceeEEEEeCC-CCEEEEeeCCCcEEEEcCCC
Q 019384 83 VRRLVFSHGKEDILGK----------HDAPVRCIEYSYA-AGQVITGSWDKSLKCWDPRG 131 (342)
Q Consensus 83 i~~w~~~~~~~~~~~~----------h~~~V~~~~~~~~-~~~l~sgs~D~~I~iWd~~~ 131 (342)
|++|+........+.. +......++++|+ +.++++...++.|++||.++
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 9999844332333321 2234889999998 66667778889999999864
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.24 E-value=3.3e-10 Score=102.64 Aligned_cols=173 Identities=17% Similarity=0.119 Sum_probs=118.0
Q ss_pred ceEEEEEeCCCCeE-EEecCCcEEEEEeccCc-----------eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcC
Q 019384 62 PVLDCCFHDDSSGF-SASADHTVRRLVFSHGK-----------EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDP 129 (342)
Q Consensus 62 ~V~~~~~~~~~~~~-s~s~D~~i~~w~~~~~~-----------~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~ 129 (342)
.+..+++++...++ +|+.+ .+.+|++...+ ......+.. |+.++| ++..|+.+ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 57888998766655 55555 55669865332 112234556 999999 78888888 8899999998
Q ss_pred CCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccC
Q 019384 130 RGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE 209 (342)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~ 209 (342)
++... ......+ ...+..+.+.+..+++++.||.+.+||+.+... .
T Consensus 114 ~sl~~--~~~~~~~--~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~-------------~----------------- 159 (388)
T 1xip_A 114 EELSE--FRTVTSF--EKPVFQLKNVNNTLVILNSVNDLSALDLRTKST-------------K----------------- 159 (388)
T ss_dssp SSTTC--EEEEEEC--SSCEEEEEECSSEEEEEETTSEEEEEETTTCCE-------------E-----------------
T ss_pred hhhhc--cCcccee--ecceeeEEecCCCEEEEECCCCEEEEEccCCcc-------------c-----------------
Confidence 75432 1122222 233555555444577888888888888865310 0
Q ss_pred CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCcee--eecc------
Q 019384 210 GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKR--LYQY------ 281 (342)
Q Consensus 210 ~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~--~~~~------ 281 (342)
. +. ..|+|++|||+| ++.|..||++++|+...+.. ..++
T Consensus 160 ---~-------------------~~---------~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 160 ---Q-------------------LA---------QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp ---E-------------------EE---------ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHH
T ss_pred ---c-------------------cc---------CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCccc
Confidence 0 00 138899999999 78899999999998876653 3333
Q ss_pred C---CCCcceEEEEECCCCCEEEEEEec
Q 019384 282 S---KYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 282 ~---~~~~~V~~v~~spdg~~las~s~~ 306 (342)
. +|...|.+|.|.+++++|++-...
T Consensus 207 ~~~~~~~~~V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 207 EELPVEEYSPLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp HTSCTTTSEEEEEEESSSSEEEEEEECC
T ss_pred ccccCCCeeEEEEEEecCCeEEEEEcCC
Confidence 2 477889999999999999876653
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=1.8e-08 Score=91.31 Aligned_cols=255 Identities=12% Similarity=0.062 Sum_probs=147.5
Q ss_pred CCCccCCCCCCCCeEEEEEcCCCCeEEEEe----------CCCcEEEEECCCceeeeeeec--------CCceEEEEEeC
Q 019384 9 TSGRELGNPPSDGISNLRFSNHSDHLLVSS----------WDKSVRLYDASANVLRGEFMH--------GGPVLDCCFHD 70 (342)
Q Consensus 9 ~~~~~~~~~~~~~V~~l~fs~~~~~l~s~s----------~Dgti~vwd~~~~~~~~~~~h--------~~~V~~~~~~~ 70 (342)
.+++.+...+.+....++||||+++|..+. .+++|.+||..+.+....+.- ......+.|+|
T Consensus 55 ~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 55 GSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred CCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence 344444443333334899999999998775 378999999987655443321 12345788988
Q ss_pred CCCe-EEEec--CCcEEEEEeccCceeec-ccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCCCCCCcceeee-eecC
Q 019384 71 DSSG-FSASA--DHTVRRLVFSHGKEDIL-GKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPRGASGQERTLV-GTYP 144 (342)
Q Consensus 71 ~~~~-~s~s~--D~~i~~w~~~~~~~~~~-~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~~~-~~~~ 144 (342)
+++. +.+.. ++.|.++| .+++.... .... .|+.+.|++ ..+++.+.|+++.++|. ++........ ....
T Consensus 135 DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~ 209 (373)
T 2mad_H 135 NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLT 209 (373)
T ss_pred CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccccc
Confidence 7765 45553 46799999 87764321 2111 134455555 45677788999999998 4332100000 0000
Q ss_pred CCCcE---EEEeccCCeEEEEEcCCeEEEEeCCCCCCcccc-ccc------cc---ceeeEEEEEeeCCceEEEEccC--
Q 019384 145 QPERV---YSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQR-RES------SL---KYQTRCVRCYPNGTGYALSSVE-- 209 (342)
Q Consensus 145 ~~~~v---~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~-~~~------~~---~~~~~~v~~~~~~~~~~~~s~~-- 209 (342)
....+ ..+..++..++..+.++.+.+.|+......... ... .. +.....+.++|+++.+++...+
T Consensus 210 ~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 210 AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 11111 123334455555567788999998654211100 000 00 1112236678888877665432
Q ss_pred ------CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEec-CCCeEEEEeCCCceeeec
Q 019384 210 ------GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGG-CDGFVNVWDGNNKKRLYQ 280 (342)
Q Consensus 210 ------~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs-~Dg~I~iWd~~~~~~~~~ 280 (342)
....++++|..+.+....+.+. .....++|+|||+ .++++. .+++|.+||..+++.+.+
T Consensus 290 ~~~~~~~~~~V~VID~~t~~vv~~i~~g------------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQTSSQISLG------------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred cccccCCCCeEEEEECCCCEEEEEEECC------------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 1234667887543322222111 1367899999999 777777 489999999999888766
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=1.5e-08 Score=93.10 Aligned_cols=235 Identities=9% Similarity=-0.033 Sum_probs=140.1
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCC--cEEEEEeccCce-e
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADH--TVRRLVFSHGKE-D 94 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~--~i~~w~~~~~~~-~ 94 (342)
-.....|+|+++++++++...++.|++||..++.+........... ++|.+++. ++.+..++ .|..++...... .
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4578899999999988888888999999998877665544333344 88887765 45666655 577777655432 2
Q ss_pred ec----ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeee---c--CCCC-c-EEEEeccCCeEE-EE
Q 019384 95 IL----GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGT---Y--PQPE-R-VYSLSLVGNRLV-VA 162 (342)
Q Consensus 95 ~~----~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~---~--~~~~-~-v~~~s~~~~~~~-~~ 162 (342)
.+ ......+.+++++|++..|+.+..++.|..||..+... ..+.. . .... . -+.++.++..++ +-
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~---~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV---TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE---EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE---EEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 22 22456678999999666666677788999999864321 11110 0 0111 1 334444323333 33
Q ss_pred EcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEcc--CCeEEEEEeechhhhhcccceeeeEEecCCCC
Q 019384 163 TAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSV--EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGR 240 (342)
Q Consensus 163 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~--~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~ 240 (342)
...+.|+.||.... ... +.+.. .+. -|. .... ..
T Consensus 286 ~~~~~I~~~~~~g~--------------~~~----------~~g~~~~~g~-----~dg-~~~~-~~------------- 321 (409)
T 3hrp_A 286 QNLSSVYKITPDGE--------------CEW----------FCGSATQKTV-----QDG-LREE-AL------------- 321 (409)
T ss_dssp TTTTEEEEECTTCC--------------EEE----------EEECTTCCSC-----BCE-EGGG-CB-------------
T ss_pred CCCCEEEEEecCCC--------------EEE----------EEeCCCCCCc-----CCC-cccc-cE-------------
Confidence 44456666654321 000 00100 000 000 0000 00
Q ss_pred ceeeeeeEEEEcCCCCeEEEec-CCCeEEEEeCCCceeeeccCCC---------------CcceEEEEECCCCCEEEEEE
Q 019384 241 DIVYPVNAIAFHPIYGTFATGG-CDGFVNVWDGNNKKRLYQYSKY---------------PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 241 ~~~~~v~~v~~sp~~~~l~sgs-~Dg~I~iWd~~~~~~~~~~~~~---------------~~~V~~v~~spdg~~las~s 304 (342)
......++++|+|.++++-+ .++.|+.||..++... .+.++ ......++++|||.++++-.
T Consensus 322 --~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~ 398 (409)
T 3hrp_A 322 --FAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA 398 (409)
T ss_dssp --CSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES
T ss_pred --eCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC
Confidence 01256799999999888888 8999999997766532 22222 24579999999988776543
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.20 E-value=4.4e-08 Score=84.92 Aligned_cols=224 Identities=8% Similarity=-0.027 Sum_probs=139.6
Q ss_pred cCCceEEEEEeCCCCeEEEec-CCcEEEEEeccCceeec--ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCc
Q 019384 59 HGGPVLDCCFHDDSSGFSASA-DHTVRRLVFSHGKEDIL--GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQ 135 (342)
Q Consensus 59 h~~~V~~~~~~~~~~~~s~s~-D~~i~~w~~~~~~~~~~--~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~ 135 (342)
+...+.++++.+++.++.+.. ++.+.+|+.. +....+ ..+...+.++++.+++...++...++.|..||... .
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-- 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG-I-- 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C--
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-c--
Confidence 345788999988888766654 6789999877 543322 23456789999999998888777788999999752 1
Q ss_pred ceeeeeecCCCCcEEEEecc--CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEE
Q 019384 136 ERTLVGTYPQPERVYSLSLV--GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVA 213 (342)
Q Consensus 136 ~~~~~~~~~~~~~v~~~s~~--~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~ 213 (342)
. ..+........+..+..+ +..+++...++.|..||. ++.... .........+..+++.+++..+++...++.+
T Consensus 89 ~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i- 164 (299)
T 2z2n_A 89 I-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFITLGSDNALWFTENQNNAI- 164 (299)
T ss_dssp E-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEE-
T ss_pred E-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceEEEcCCCCEEEEeCCCCEE-
Confidence 1 111111112234455554 444444445678999998 432211 1111112346778888888766655555554
Q ss_pred EEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeee-ccCCCCcceEEEE
Q 019384 214 MEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLY-QYSKYPTSIAALS 292 (342)
Q Consensus 214 i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~-~~~~~~~~V~~v~ 292 (342)
..+|. +. ....+.+.. ....+..++++++|..+++...++.|.+||. +++... .+..+...+.+++
T Consensus 165 -~~~~~-~g-~~~~~~~~~---------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~ 231 (299)
T 2z2n_A 165 -GRITE-SG-DITEFKIPT---------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAIT 231 (299)
T ss_dssp -EEECT-TC-CEEEEECSS---------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred -EEEcC-CC-cEEEeeCCC---------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEE
Confidence 45776 22 111111110 0113678999999988787777889999998 554322 2344556789999
Q ss_pred ECCCCCEEEEE
Q 019384 293 FSRDGRLLAVA 303 (342)
Q Consensus 293 ~spdg~~las~ 303 (342)
++++|+++++.
T Consensus 232 ~~~~g~l~v~~ 242 (299)
T 2z2n_A 232 AGAGIDLWFTE 242 (299)
T ss_dssp ECSTTCEEEEE
T ss_pred ECCCCCEEEec
Confidence 99999977654
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.19 E-value=3.7e-08 Score=87.47 Aligned_cols=228 Identities=12% Similarity=0.002 Sum_probs=132.5
Q ss_pred CeEEEEEcCCCC-eEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeeccc-
Q 019384 21 GISNLRFSNHSD-HLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGK- 98 (342)
Q Consensus 21 ~V~~l~fs~~~~-~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~- 98 (342)
.....+|+|+++ ++++...++.|.+||..+++... ......+.++.+.+++.++.++.+ .+.+|+..+++...+..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HALPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EECSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECS
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EECCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeC
Confidence 346789999754 55666678999999998776543 334567999999888877766644 48888887776443321
Q ss_pred ----CCcceeEEEEeCCCCEEEEeeCC----CcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEE-EcCCeEE
Q 019384 99 ----HDAPVRCIEYSYAAGQVITGSWD----KSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVA-TAGRHVN 169 (342)
Q Consensus 99 ----h~~~V~~~~~~~~~~~l~sgs~D----~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~-s~d~~v~ 169 (342)
....++.++++++++++++...+ ....||.+.+ +.......... ......++.+++.++.+ +.++.|.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~--g~~~~~~~~~~-~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAK--GKVTKLFADIS-IPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEET--TEEEEEEEEES-SEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeC--CcEEEeeCCCc-ccCCeEEcCCCCEEEEEECCCCEEE
Confidence 12468899999999876654322 2233333221 11111111110 11122333344444333 3345566
Q ss_pred EEeCC--CC-CCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee
Q 019384 170 VYDLR--NM-SQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV 246 (342)
Q Consensus 170 iwd~~--~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v 246 (342)
+||+. ++ ... ...+ +.+... .....
T Consensus 205 ~~d~~~~~Gl~~~-----------------------------~~~~---~~~~~~--------------------~~~~p 232 (326)
T 2ghs_A 205 RVPLDARTGLPTG-----------------------------KAEV---FIDSTG--------------------IKGGM 232 (326)
T ss_dssp EEEBCTTTCCBSS-----------------------------CCEE---EEECTT--------------------SSSEE
T ss_pred EEEcccccCCccc-----------------------------CceE---EEECCC--------------------CCCCC
Confidence 66653 11 000 0000 000000 00124
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEEC-CCCCEEEEEEec
Q 019384 247 NAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFS-RDGRLLAVASSY 306 (342)
Q Consensus 247 ~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~s-pdg~~las~s~~ 306 (342)
..+++.++|.++++...++.|.+||. +++.+..+......+.+++|+ ||+..|.+++..
T Consensus 233 ~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 233 DGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 56888999987777666789999998 456666665555679999998 999877666653
No 208
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.17 E-value=8.4e-09 Score=101.01 Aligned_cols=296 Identities=11% Similarity=0.055 Sum_probs=171.6
Q ss_pred CCCeEEEEeCCCcEEEEECCCceeeeeeecC------CceEEEEEeCCCCeEEEe------cCCcEEEEEeccCceee-c
Q 019384 30 HSDHLLVSSWDKSVRLYDASANVLRGEFMHG------GPVLDCCFHDDSSGFSAS------ADHTVRRLVFSHGKEDI-L 96 (342)
Q Consensus 30 ~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~------~~V~~~~~~~~~~~~s~s------~D~~i~~w~~~~~~~~~-~ 96 (342)
++.+|+.++.|+.+..+|..+++++...... ..+.+.-...++.++.++ .++.+..||..+++..- +
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 3567888999999999999988765543321 112111111245555543 26788889888877421 1
Q ss_pred c-------------------------------cCCcceeEEEEeCCCCEEEEeeCCCc-------------------EEE
Q 019384 97 G-------------------------------KHDAPVRCIEYSYAAGQVITGSWDKS-------------------LKC 126 (342)
Q Consensus 97 ~-------------------------------~h~~~V~~~~~~~~~~~l~sgs~D~~-------------------I~i 126 (342)
. ++......+++.+++++|+.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 0 01111125788888889998887764 999
Q ss_pred EcCCCCCCcceeeeeecC-------CCCc--EEEEeccCC---eEEEEEcCCeEEEEeCCCCCCccccccccc-------
Q 019384 127 WDPRGASGQERTLVGTYP-------QPER--VYSLSLVGN---RLVVATAGRHVNVYDLRNMSQPEQRRESSL------- 187 (342)
Q Consensus 127 Wd~~~~~~~~~~~~~~~~-------~~~~--v~~~s~~~~---~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~------- 187 (342)
||.+++.. ........ .... ...+..++. .++.++.+|.+.++|.++++..........
T Consensus 280 lD~~TG~~--~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 280 VNADTGEY--VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp EETTTCCE--EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EEccCCce--eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccC
Confidence 99886543 22222111 1111 122333443 577788889999999998864311100000
Q ss_pred -------------------ce-----------eeEEEEEeeCCceEEEEccCC---------------------------
Q 019384 188 -------------------KY-----------QTRCVRCYPNGTGYALSSVEG--------------------------- 210 (342)
Q Consensus 188 -------------------~~-----------~~~~v~~~~~~~~~~~~s~~~--------------------------- 210 (342)
.. .-..++++|+...+++.+.+.
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 00 001256677766666553220
Q ss_pred ----------------eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC
Q 019384 211 ----------------RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 211 ----------------~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
.-.+..||..+.+ ..|....+. ++..-.+...+..++.|+.||.++.||.++
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~--~~W~~~~~~----------~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQ--AAWEVPYVT----------IFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTTE--EEEEEEESS----------SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCCC--eEeEccCCC----------CccCccceECCCEEEEECCCCcEEEEECCC
Confidence 1345557765432 223322211 122234556788999999999999999999
Q ss_pred ceeeeccCCC-CcceEEEEECCCCC-EEEEEEeccccC---------CCCCCCCCcEEEEEccCCccccCCCCCCC
Q 019384 275 KKRLYQYSKY-PTSIAALSFSRDGR-LLAVASSYTFEE---------GDKPHEPDAIFVRSVNEIEVKPKPKAYPN 339 (342)
Q Consensus 275 ~~~~~~~~~~-~~~V~~v~~spdg~-~las~s~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (342)
++.+.+++.. .....-+.|+.||+ |+++.+.++-.. .......+.++++.+......|...+|.+
T Consensus 506 G~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f~l~~~~~~p~~~~~~~ 581 (689)
T 1yiq_A 506 GEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTYKLGGTAKLQEPAPRPD 581 (689)
T ss_dssp CCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEEEETCCCCCCCCCCCCC
T ss_pred CccceeeeCCCCcccCceEEEECCEEEEEEEecCCccccccccccccccccCCCceEEEeecCCcccccccccccc
Confidence 9998777533 22335688889998 666665532111 12234556889999976555565555653
No 209
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.12 E-value=1.9e-08 Score=98.36 Aligned_cols=284 Identities=12% Similarity=0.094 Sum_probs=166.4
Q ss_pred CCCeEEEEeCCCcEEEEECCCceeeeeeecC------CceEEEEEeCCCCeEEEec------CCcEEEEEeccCceee--
Q 019384 30 HSDHLLVSSWDKSVRLYDASANVLRGEFMHG------GPVLDCCFHDDSSGFSASA------DHTVRRLVFSHGKEDI-- 95 (342)
Q Consensus 30 ~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~------~~V~~~~~~~~~~~~s~s~------D~~i~~w~~~~~~~~~-- 95 (342)
++.+|+.++.|+.+..+|..+++.+..+... ..+.+.-...++.++.++. ++.|..+|..+++..-
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3567888899999999999988766544322 1222211223556665553 6889999988877431
Q ss_pred -cc------------------------------cCCcceeEEEEeCCCCEEEEeeCCC-------------------cEE
Q 019384 96 -LG------------------------------KHDAPVRCIEYSYAAGQVITGSWDK-------------------SLK 125 (342)
Q Consensus 96 -~~------------------------------~h~~~V~~~~~~~~~~~l~sgs~D~-------------------~I~ 125 (342)
.. +.......+++.++++.|+.++.++ +|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 10 0111123578888888888777664 589
Q ss_pred EEcCCCCCCcceeeeeecCC---------CCcEEEEeccC---CeEEEEEcCCeEEEEeCCCCCCcccccccccc-----
Q 019384 126 CWDPRGASGQERTLVGTYPQ---------PERVYSLSLVG---NRLVVATAGRHVNVYDLRNMSQPEQRRESSLK----- 188 (342)
Q Consensus 126 iWd~~~~~~~~~~~~~~~~~---------~~~v~~~s~~~---~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~----- 188 (342)
.+|.+++.. ...+....+ ...+.....++ +.++.++.+|.+.++|.++++..........+
T Consensus 287 AlD~~TG~~--~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 287 ALDPDTGKY--KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EECTTTCCE--EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEECCCCCE--EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 999876543 222221111 11222333355 46788888999999999987643211110000
Q ss_pred ---ee-e------------------------EEEEEeeCCceEEEEccC-------------------------------
Q 019384 189 ---YQ-T------------------------RCVRCYPNGTGYALSSVE------------------------------- 209 (342)
Q Consensus 189 ---~~-~------------------------~~v~~~~~~~~~~~~s~~------------------------------- 209 (342)
.. + ..++++|++..+++...+
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 00 0 135677877777665431
Q ss_pred ----------CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeee
Q 019384 210 ----------GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLY 279 (342)
Q Consensus 210 ----------~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~ 279 (342)
..-.|..||..+.+ ..|..... .++....+..++..++.++.||.+++||.++++.+.
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~--~~W~~~~~----------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQK--AAWSVEHV----------SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTE--EEEEEEES----------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccCCCCCccEEEEEeCCCCc--EEeecCCC----------CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 01345567765432 22322211 123344566678889999999999999999999987
Q ss_pred ccC-CCCcceEEEEECCCCC-EEEEEEecccc-----CCCCCCCCCcEEEEEccC
Q 019384 280 QYS-KYPTSIAALSFSRDGR-LLAVASSYTFE-----EGDKPHEPDAIFVRSVNE 327 (342)
Q Consensus 280 ~~~-~~~~~V~~v~~spdg~-~las~s~~~~~-----~~~~~~~~~~~~~~~~~~ 327 (342)
++. ++.....-+.|++||+ ++++.+.+... ..........++.+.+..
T Consensus 513 ~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 513 EAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred eeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 765 3333446677889998 55554543211 111233356788888864
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.11 E-value=4.2e-08 Score=90.01 Aligned_cols=282 Identities=11% Similarity=-0.007 Sum_probs=160.8
Q ss_pred CCCCeEEEEeC-C----CcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEe----------cCCcEEEEEeccCc
Q 019384 29 NHSDHLLVSSW-D----KSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSAS----------ADHTVRRLVFSHGK 92 (342)
Q Consensus 29 ~~~~~l~s~s~-D----gti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s----------~D~~i~~w~~~~~~ 92 (342)
++++++..+.. + ++|.++|..+.+....+.-...- .+.++++++ ++.+. .++.|.++|..+.+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 46665554433 3 79999999998877665444344 899997775 44444 35688999988876
Q ss_pred ee-ec--c--c---CCcceeEEEEeCCCCEEEEeeC--CCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc-CCeEEE
Q 019384 93 ED-IL--G--K---HDAPVRCIEYSYAAGQVITGSW--DKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV-GNRLVV 161 (342)
Q Consensus 93 ~~-~~--~--~---h~~~V~~~~~~~~~~~l~sgs~--D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~-~~~~~~ 161 (342)
.. .+ . . ....-..++|+||+++++.+.. +++|.+.|+.+... +........ ..+.+. ...+++
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv-----v~~I~v~g~-~~~~p~g~~~~v~ 234 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF-----DRMLDVPDC-YHIFPASPTVFYM 234 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE-----EEEEECCSE-EEEEEEETTEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE-----EEEEEcCCc-eeeccCCCcEEEE
Confidence 32 22 1 1 1233457889999999988764 57899999875432 222111121 122232 245666
Q ss_pred EEcCCeEEEEeCCCCCCcccc---cccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc--ccceeeeEEec
Q 019384 162 ATAGRHVNVYDLRNMSQPEQR---RESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA--KKYAFKCHRKS 236 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~--~~~~~~~h~~~ 236 (342)
.+.|+++.+.++.+++..... ...........+.+.+++..++..+..+.+ .++|....... ..+.+..-...
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V--~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKI--FQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEE--EEEEECSSCEEECCCEESSCTTTG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcE--EEEeccCCceEEeeeeeecccccc
Confidence 777888887887443221100 000000001123457777777777766654 55776422110 11110000000
Q ss_pred CCCCceeeeeeEEEEcCCCCeEEEecC----------CCeEEEEeCCCceeeeccCCCCcceEEEEECCCCC-EEEEEEe
Q 019384 237 EAGRDIVYPVNAIAFHPIYGTFATGGC----------DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGR-LLAVASS 305 (342)
Q Consensus 237 ~~~~~~~~~v~~v~~sp~~~~l~sgs~----------Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~-~las~s~ 305 (342)
..+ ........++++|+++.++.... +++|.+.|..+.+.+.++.. ....++++|+|||+ +|.++..
T Consensus 313 ~~g-~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 313 ADD-WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp GGT-EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEET
T ss_pred ccc-cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcC
Confidence 000 00011234789999887665532 45899999999988877652 23579999999999 7776653
Q ss_pred ccccCCCCCCCCCcEEEEEccCCccc
Q 019384 306 YTFEEGDKPHEPDAIFVRSVNEIEVK 331 (342)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (342)
.. +.+-++....+.+.
T Consensus 391 ~s----------~~VsVID~~t~kvv 406 (426)
T 3c75_H 391 GT----------QTLHIYDAATGEEL 406 (426)
T ss_dssp TT----------TEEEEEETTTCCEE
T ss_pred CC----------CeEEEEECCCCCEE
Confidence 11 14666666554443
No 211
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.10 E-value=1.7e-08 Score=88.10 Aligned_cols=187 Identities=10% Similarity=0.054 Sum_probs=116.4
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee-c----CCceEEEEEeCCCCeEEE-----ecC------
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM-H----GGPVLDCCFHDDSSGFSA-----SAD------ 80 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-h----~~~V~~~~~~~~~~~~s~-----s~D------ 80 (342)
.+...+.+++|+++|+++++...++.|.+||..+++...... . ...+.++++.+++.++.+ +.+
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccc
Confidence 355678999999999988887778999999997766443321 1 234567889888877643 210
Q ss_pred -----CcEEEEEecc-CceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc---eeeeeecCCCCcEEE
Q 019384 81 -----HTVRRLVFSH-GKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE---RTLVGTYPQPERVYS 151 (342)
Q Consensus 81 -----~~i~~w~~~~-~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~---~~~~~~~~~~~~v~~ 151 (342)
+.-.+|.+.. +....+..+......++|+|+++.+++.+.++.|.+||+.. .+.. ...+........-+.
T Consensus 146 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~-~g~~~~~~~~~~~~~~~p~~i~ 224 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA-RGETEYQGVHFTVEPGKTDGLR 224 (296)
T ss_dssp CCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS-SSCEEEEEEEECCSSSCCCSEE
T ss_pred ccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC-CCcCcCCCeEeeCCCCCCCeEE
Confidence 1224555543 34444455666788999999999888888889999999862 1211 111211111112234
Q ss_pred EeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEE-eeCCceEEEEccCC
Q 019384 152 LSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRC-YPNGTGYALSSVEG 210 (342)
Q Consensus 152 ~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~s~~~ 210 (342)
++.+++ +.+++ ++.|.+||... +.. .....+. . +.++++ .|+++.+++++.++
T Consensus 225 ~d~~G~-l~v~~-~~~v~~~~~~g-~~~-~~~~~~~-~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 225 VDAGGL-IWASA-GDGVHVLTPDG-DEL-GRVLTPQ-T-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp EBTTSC-EEEEE-TTEEEEECTTS-CEE-EEEECSS-C-CCEEEEESTTSCEEEEEETTE
T ss_pred ECCCCC-EEEEc-CCeEEEECCCC-CEE-EEEECCC-C-ceeEEEECCCCCEEEEEcCCe
Confidence 555565 44444 88999999863 221 1111111 1 566777 57888888877653
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.09 E-value=5e-08 Score=85.65 Aligned_cols=98 Identities=5% Similarity=-0.081 Sum_probs=69.1
Q ss_pred CCCCeEEEEEcCCCC-eEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEec-CCcEEEEEeccCceee
Q 019384 18 PSDGISNLRFSNHSD-HLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASA-DHTVRRLVFSHGKEDI 95 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~-~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~-D~~i~~w~~~~~~~~~ 95 (342)
.........|+++++ ++++...++.|..|+.. +.......+.+.+.++++.+++.++.+.. ++.|.+|+.+ +....
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE
Confidence 344567899999998 56777788999999984 44444445667789999998888877664 4678888765 44332
Q ss_pred ccc-----CCcceeEEEEeCCCCEEEE
Q 019384 96 LGK-----HDAPVRCIEYSYAAGQVIT 117 (342)
Q Consensus 96 ~~~-----h~~~V~~~~~~~~~~~l~s 117 (342)
+.. ....++.+++.++|...+|
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEE
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEe
Confidence 221 1134677889998887776
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=1.6e-08 Score=99.16 Aligned_cols=232 Identities=16% Similarity=0.132 Sum_probs=130.2
Q ss_pred cCCceEEEEEeCCCCeEE--EecC----CcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCc---------
Q 019384 59 HGGPVLDCCFHDDSSGFS--ASAD----HTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKS--------- 123 (342)
Q Consensus 59 h~~~V~~~~~~~~~~~~s--~s~D----~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~--------- 123 (342)
|...+.++.|+|+++.+. .+.. .+|++||+.+++......+.....+++|+ |++.|+-++.|..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 344677889999887543 2222 46899999988743221111113578999 9999988887743
Q ss_pred ----EEEEcCCCCCCcceeeeeecC-CCCcE--EEEeccCCeEEEEEcC----CeEEEEeCCCCCCcccccccccceeeE
Q 019384 124 ----LKCWDPRGASGQERTLVGTYP-QPERV--YSLSLVGNRLVVATAG----RHVNVYDLRNMSQPEQRRESSLKYQTR 192 (342)
Q Consensus 124 ----I~iWd~~~~~~~~~~~~~~~~-~~~~v--~~~s~~~~~~~~~s~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~ 192 (342)
|++|++.+............. +.... ..++.+++.++..... ..|.++|+.+.............. ..
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-~~ 284 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-DV 284 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS-CE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc-eE
Confidence 999998754332222222111 12222 3456667766544432 479999997653222222211111 12
Q ss_pred EEEEeeCCceEEEEcc-CC-eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecC-CC--eE
Q 019384 193 CVRCYPNGTGYALSSV-EG-RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC-DG--FV 267 (342)
Q Consensus 193 ~v~~~~~~~~~~~~s~-~~-~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~-Dg--~I 267 (342)
.. +++++..++..+. ++ ...|..+|+..........+..|.. .+. .|+|+++.|+.... |+ .|
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---------~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ---------QVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---------SCE--EEEEETTEEEEEEEETTEEEE
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC---------CEE--EEEEECCEEEEEEEECCeeEE
Confidence 22 5566666554443 22 3456678875432111112222221 122 78899988766554 44 78
Q ss_pred EEEeCCCceeeeccC-CCCcceEEEEECCCCCEEEEEEe
Q 019384 268 NVWDGNNKKRLYQYS-KYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 268 ~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las~s~ 305 (342)
++||...+. ...+. .....+..++++||+..|+...+
T Consensus 353 ~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 353 EQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp EEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred EEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEec
Confidence 999987543 33332 23456888899999986665543
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.07 E-value=3.6e-09 Score=95.82 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=121.6
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce-----------eeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEE
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANV-----------LRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLV 87 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~-----------~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~ 87 (342)
...++.|++++...++++|+.|+ ++||+++.-. ......+.+ |+.++| ++..++.+ .++.|++|+
T Consensus 37 ~~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 37 FASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-ETTEEEEE-ESSEEEEEE
T ss_pred cccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-CCCEEEEE-cCCcEEEEE
Confidence 34799999999999999999985 6669964321 112345667 999999 44444455 889999999
Q ss_pred eccCc-eeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCC
Q 019384 88 FSHGK-EDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGR 166 (342)
Q Consensus 88 ~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~ 166 (342)
+.+.. ......|...|.++.+.+. .++.++.||+|.+||+...... .. ...+.+++++++.++.+..|+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~---~~-----~~~Vs~v~WSpkG~~vg~~dg 182 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK---QL-----AQNVTSFDVTNSQLAVLLKDR 182 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE---EE-----EESEEEEEECSSEEEEEETTS
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc---cc-----cCCceEEEEcCCceEEEEcCC
Confidence 87655 2345567777888877653 4889999999999999743321 11 134667888777789999999
Q ss_pred eEEEEeCCCCCCc-cccc------c--cccceeeEEEEEeeCCceEEE
Q 019384 167 HVNVYDLRNMSQP-EQRR------E--SSLKYQTRCVRCYPNGTGYAL 205 (342)
Q Consensus 167 ~v~iwd~~~~~~~-~~~~------~--~~~~~~~~~v~~~~~~~~~~~ 205 (342)
++++|+....... .... . .....++.++.|.+++..+++
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999987664310 0001 0 013467889999998887664
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.04 E-value=3.2e-10 Score=102.73 Aligned_cols=204 Identities=16% Similarity=0.093 Sum_probs=107.8
Q ss_pred CCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEecCCcEEEEEeccCcee-ecccCCc-ceeEE
Q 019384 30 HSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASADHTVRRLVFSHGKED-ILGKHDA-PVRCI 106 (342)
Q Consensus 30 ~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~-~~~~h~~-~V~~~ 106 (342)
++.+|++++.||.|+.||..+++++..+.. +.+.+..+..++. +++++.|+.+..||..+++.. .+..+.. .+.+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 578899999999999999999887665544 5665555555554 456689999999999777632 2222211 11110
Q ss_pred EEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccc
Q 019384 107 EYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESS 186 (342)
Q Consensus 107 ~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~ 186 (342)
-...+++.|++++.|+.|..||.+++... ..+.. .. ...++..++.+++++.++.|..||.++++..-.
T Consensus 87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~--w~~~~---~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~----- 155 (369)
T 2hz6_A 87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQ--QTLSS---AF-ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN----- 155 (369)
T ss_dssp SCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCE-----
T ss_pred ceEecCCEEEEEeCCCEEEEEECCCCcEE--EEecC---CC-cccccccCCEEEEEecCCEEEEEECCCCCEEEe-----
Confidence 00113457888899999999998765431 11111 11 112333556777788888888888876532110
Q ss_pred cceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCC---CCeEEEecC
Q 019384 187 LKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPI---YGTFATGGC 263 (342)
Q Consensus 187 ~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~---~~~l~sgs~ 263 (342)
. ..+. ....++.++ ...++.++.
T Consensus 156 --------------------------------~-----------~~~~-----------~~~~~~~~~~~~~~~v~~~~~ 181 (369)
T 2hz6_A 156 --------------------------------A-----------TYFD-----------YAASLPEDDVDYKMSHFVSNG 181 (369)
T ss_dssp --------------------------------E-----------EEEE-----------ECCBCCCCCTTCCCCEEEEET
T ss_pred --------------------------------E-----------eccc-----------ccCccccCCccccceEEEECC
Confidence 0 0000 000111221 145667888
Q ss_pred CCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCE
Q 019384 264 DGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRL 299 (342)
Q Consensus 264 Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~ 299 (342)
||.|+.||.++++.+.++......+....+++||..
T Consensus 182 dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 182 DGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp SCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred CCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 999999999999887766533333355677888874
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=5.3e-08 Score=89.30 Aligned_cols=242 Identities=12% Similarity=0.048 Sum_probs=142.2
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEECCCceeeeeeec--------CCceEEEEEeCCCCe-EEEec--CCc
Q 019384 24 NLRFSNHSDHLLVSS----------WDKSVRLYDASANVLRGEFMH--------GGPVLDCCFHDDSSG-FSASA--DHT 82 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s----------~Dgti~vwd~~~~~~~~~~~h--------~~~V~~~~~~~~~~~-~s~s~--D~~ 82 (342)
.++||||+++|..+. .+++|.++|..+.+....+.- ......+.|+++++. +.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999888775 478999999998776554422 133457889887765 45543 578
Q ss_pred EEEEEeccCcee-ecccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCCCCCCccee--eeeecCCCC-cEEEEeccCC
Q 019384 83 VRRLVFSHGKED-ILGKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPRGASGQERT--LVGTYPQPE-RVYSLSLVGN 157 (342)
Q Consensus 83 i~~w~~~~~~~~-~~~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~~~~~~~~~--~~~~~~~~~-~v~~~s~~~~ 157 (342)
|.+.|..+.+.. .+..- . +....|++ ..+++.+.|+++.+.+..+....... .+.....+. ....+..+++
T Consensus 202 VsVID~~t~kvv~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 999999887632 22110 0 12223332 44556666777666666322110000 000000000 0123455667
Q ss_pred eEEEEEcCCeEEEEeCCCCCCccccc-------ccccceee---EEEEEeeCCceEEEEccC--------CeEEEEEeec
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRR-------ESSLKYQT---RCVRCYPNGTGYALSSVE--------GRVAMEFFDL 219 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~-------~~~~~~~~---~~v~~~~~~~~~~~~s~~--------~~~~i~~~d~ 219 (342)
.++..+..+++.+.|+.......... ........ ..++++|+++.+++...+ ....+.++|.
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 77777778889999986532110000 00000111 125788988876665421 2345677998
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEec-CCCeEEEEeCCCceeeecc
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGG-CDGFVNVWDGNNKKRLYQY 281 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs-~Dg~I~iWd~~~~~~~~~~ 281 (342)
.+.+....+.+. .....++|+||++ .+++.. .+++|.++|..+++.+.++
T Consensus 358 ~T~kvv~~I~vg------------~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELG------------HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEE------------EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECC------------CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 654433333221 1367899999998 777776 5999999999999988775
No 217
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.00 E-value=1.1e-07 Score=81.36 Aligned_cols=194 Identities=9% Similarity=-0.011 Sum_probs=122.4
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee-ecCCceEEEEEeCCCCeEEE-ecCCcEEEEEeccCceee-
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF-MHGGPVLDCCFHDDSSGFSA-SADHTVRRLVFSHGKEDI- 95 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~-~h~~~V~~~~~~~~~~~~s~-s~D~~i~~w~~~~~~~~~- 95 (342)
...+.+++|+++++++++.. ++.|.+||..+....... .....+.++++.+++.++.+ ..++.|.+|+..+.....
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 35788999999998766655 899999998765543322 22356889999877777654 557788888654433222
Q ss_pred cccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc--CCeEEEEEcCCeEEEEeC
Q 019384 96 LGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--GNRLVVATAGRHVNVYDL 173 (342)
Q Consensus 96 ~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--~~~~~~~s~d~~v~iwd~ 173 (342)
.......+.+++++++++.+++...++.|.+||...... ... ..........+..+ +..+++...++.|.+||.
T Consensus 145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~---~~~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ---VVL-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE---EEC-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce---Eee-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 222334678899999998777777788999999764321 111 11111234445554 434444445778999998
Q ss_pred CCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechh
Q 019384 174 RNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSE 221 (342)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~ 221 (342)
....... ........+..+++.+++..+++...++.+. +++..+
T Consensus 221 ~~~~~~~--~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~--~~~~~~ 264 (270)
T 1rwi_B 221 GSTTSTV--LPFTGLNTPLAVAVDSDRTVYVADRGNDRVV--KLTSLE 264 (270)
T ss_dssp TCSCCEE--CCCCSCSCEEEEEECTTCCEEEEEGGGTEEE--EECCCG
T ss_pred CCCccee--eccCCCCCceeEEECCCCCEEEEECCCCEEE--EEcCCC
Confidence 6542211 1111112467888999998667767777654 476643
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.00 E-value=5.1e-07 Score=78.13 Aligned_cols=223 Identities=8% Similarity=-0.002 Sum_probs=136.1
Q ss_pred CCceEEEEEeCCCCeEEEe-cCCcEEEEEeccCceee--cccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc
Q 019384 60 GGPVLDCCFHDDSSGFSAS-ADHTVRRLVFSHGKEDI--LGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE 136 (342)
Q Consensus 60 ~~~V~~~~~~~~~~~~s~s-~D~~i~~w~~~~~~~~~--~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~ 136 (342)
...+.++.+.+++.++.+. .++.|.+++.. ++... +..+...+.++++.+++...++...++.|..||.. +..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-- 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-- 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE--
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe--
Confidence 4567888888777776555 57889899877 44322 23344678999999988877777778899999975 221
Q ss_pred eeeeeecCCCCcEEEEecc--CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEE
Q 019384 137 RTLVGTYPQPERVYSLSLV--GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAM 214 (342)
Q Consensus 137 ~~~~~~~~~~~~v~~~s~~--~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i 214 (342)
..+........+..+..+ ++.+++...++.|..+|.. +... .............+.+.++++.+++...++.+
T Consensus 95 -~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i-- 169 (300)
T 2qc5_A 95 -TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSI-- 169 (300)
T ss_dssp -EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEE--
T ss_pred -EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeE--
Confidence 111111111334445443 4444444446789999876 3221 11111112346778888888855555445544
Q ss_pred EEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceee-eccCCCCcceEEEEE
Q 019384 215 EFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRL-YQYSKYPTSIAALSF 293 (342)
Q Consensus 215 ~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~-~~~~~~~~~V~~v~~ 293 (342)
..+|.. . ....+.+.. ....+..+++.++|..+++....+.|.+||. +++.. ..+......+.++++
T Consensus 170 ~~~~~~-g-~~~~~~~~~---------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 170 GRITNT-G-KLEEYPLPT---------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp EEECTT-C-CEEEEECSS---------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred EEECCC-C-cEEEeeCCC---------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence 457652 1 111111100 0113678999999987777777889999998 34332 223344567899999
Q ss_pred CCCCCEEEEE
Q 019384 294 SRDGRLLAVA 303 (342)
Q Consensus 294 spdg~~las~ 303 (342)
+++|++.++.
T Consensus 238 d~~g~l~v~~ 247 (300)
T 2qc5_A 238 GKNSEIWFTE 247 (300)
T ss_dssp CSTTCEEEEE
T ss_pred CCCCCEEEec
Confidence 9999976654
No 219
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.95 E-value=3.7e-08 Score=85.39 Aligned_cols=178 Identities=9% Similarity=-0.037 Sum_probs=112.4
Q ss_pred CCEEEEeeCCCcEEEEcCCCCCCcceeeeeecC-CCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCccccccccccee
Q 019384 112 AGQVITGSWDKSLKCWDPRGASGQERTLVGTYP-QPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQ 190 (342)
Q Consensus 112 ~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~ 190 (342)
++.|++++.|+.|.+||.++++. ...+.... .......+..+++.++ +.++.|..||. +++...+. .......
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~-~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEI--VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI-AAPAGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEE--EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE-ECCTTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeE--EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE-cCCCCcc
Confidence 56899999999999999865432 22222211 1223445666776655 56788999998 55432221 1111234
Q ss_pred eEEEEEeeCCceEEEEcc-CCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEE
Q 019384 191 TRCVRCYPNGTGYALSSV-EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNV 269 (342)
Q Consensus 191 ~~~v~~~~~~~~~~~~s~-~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~i 269 (342)
+.++...++|+.+++.+. ++ .+..+|. +.+....+.+.. . ..........+++.++|++|++...++.|..
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~--~v~~vd~-~Gk~l~~~~~~~--~---~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPS--TILEVNM-KGEVLSKTEFET--G---IERPHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTE--EEEEECT-TSCEEEEEEECC--S---CSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred ccccEECCCCCEEEEecCCCC--EEEEEeC-CCCEEEEEeccC--C---CCcccccccCceECCCCCEEEEecCCCEEEE
Confidence 567778899998877665 43 3445664 222222222110 0 0001113455678999999999999999999
Q ss_pred EeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 270 WDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 270 Wd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
||.+ ++.+.++... ....++.+.++|.+|++++.
T Consensus 151 ~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 151 IAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp ECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBT
T ss_pred ECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCC
Confidence 9998 8888777643 45678889999999887654
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.90 E-value=4.4e-07 Score=81.75 Aligned_cols=245 Identities=11% Similarity=-0.053 Sum_probs=139.0
Q ss_pred eEEEEeCCC----cEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEe----------cCCcEEEEEeccCcee-ec
Q 019384 33 HLLVSSWDK----SVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSAS----------ADHTVRRLVFSHGKED-IL 96 (342)
Q Consensus 33 ~l~s~s~Dg----ti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s----------~D~~i~~w~~~~~~~~-~~ 96 (342)
..++...++ +|.++|..+.+.+..+.-...- .+.++++++ ++.+. .++.|.+||..+.+.. .+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 344555555 8889999998877665333233 799997765 45554 3678999999988742 22
Q ss_pred ccC-------CcceeEEEEeCCCCEEEEeeC--CCcEEE--EcCCCCCCcceeeee--------------ecCCCCcEEE
Q 019384 97 GKH-------DAPVRCIEYSYAAGQVITGSW--DKSLKC--WDPRGASGQERTLVG--------------TYPQPERVYS 151 (342)
Q Consensus 97 ~~h-------~~~V~~~~~~~~~~~l~sgs~--D~~I~i--Wd~~~~~~~~~~~~~--------------~~~~~~~v~~ 151 (342)
..+ ......++++||+++++.+.. +..+.+ +|+.+ . ...... .......+..
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v-~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--D-QLTKSASCFHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--E-EEEECSSCCCCEEEETTEEECCCCTTSCEE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--c-eEEECCCceEEccCCCeEEEEEcCCCCEEE
Confidence 211 123567999999999887764 467888 99854 0 000000 0000000001
Q ss_pred E----------------------------eccCCeEEEEEcCCeEEEEeCCCCCCcccc-ccc------ccceee---EE
Q 019384 152 L----------------------------SLVGNRLVVATAGRHVNVYDLRNMSQPEQR-RES------SLKYQT---RC 193 (342)
Q Consensus 152 ~----------------------------s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~-~~~------~~~~~~---~~ 193 (342)
+ ...+..++..+. +.+.+.|+......... ... ...... ..
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred EECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCccee
Confidence 1 112223344444 56677776532111000 000 000011 12
Q ss_pred EEEeeCCceEEEEcc-C-C-----eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCe-EEEec-CC
Q 019384 194 VRCYPNGTGYALSSV-E-G-----RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGT-FATGG-CD 264 (342)
Q Consensus 194 v~~~~~~~~~~~~s~-~-~-----~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~-l~sgs-~D 264 (342)
+.++|+++.++++.. . + .-.+.++|..+.+....+.+. .....++|+|||+. +++.. .+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg------------~~p~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG------------HDSDAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE------------EEECEEEECCSSSCEEEEEETTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC------------CCcceEEECCCCCEEEEEccCCC
Confidence 678899888776644 2 2 112347898654333332221 13678999999984 56666 59
Q ss_pred CeEEEEeCCCceeeeccCCCCcceEEEEECC
Q 019384 265 GFVNVWDGNNKKRLYQYSKYPTSIAALSFSR 295 (342)
Q Consensus 265 g~I~iWd~~~~~~~~~~~~~~~~V~~v~~sp 295 (342)
++|.++|..+++.+.++.... .-+.+++.+
T Consensus 337 ~~VsVID~~t~kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 337 EVLDIYDAASDQDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp TEEEEEESSSCEEEEECCCCS-CCCEEECCC
T ss_pred CeEEEEECCCCcEEEEEECCC-CCCEEEeec
Confidence 999999999999988876443 345666654
No 221
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.81 E-value=1.1e-06 Score=76.67 Aligned_cols=186 Identities=10% Similarity=-0.018 Sum_probs=112.1
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeec-----CCceEEEEEeCCCCeEEEecC----------CcE
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMH-----GGPVLDCCFHDDSSGFSASAD----------HTV 83 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h-----~~~V~~~~~~~~~~~~s~s~D----------~~i 83 (342)
...+.+++|+++|+++++. ++.|.+||..++++...... ...+.++++.+++.++.++.. ...
T Consensus 53 ~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 4679999999999966543 66899999987765443322 234788999888887655421 334
Q ss_pred EEEEeccC-ceeecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCCcc--eeeeeecC-CCCcEE--EEeccC
Q 019384 84 RRLVFSHG-KEDILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASGQE--RTLVGTYP-QPERVY--SLSLVG 156 (342)
Q Consensus 84 ~~w~~~~~-~~~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~~~--~~~~~~~~-~~~~v~--~~s~~~ 156 (342)
.+|.+... ....+..+....+.++|+|+++.| ++.+.++.|.+||+....+.. ...+.... ...... .++.++
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 56666533 222233333456789999999866 566778899999864222211 11121111 112233 344456
Q ss_pred CeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEe-eCCceEEEEcc
Q 019384 157 NRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCY-PNGTGYALSSV 208 (342)
Q Consensus 157 ~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~ 208 (342)
+..++...++.|..||..+++..... ..+ ...+++++|. |+++.+++++.
T Consensus 211 ~lwva~~~~~~v~~~d~~tG~~~~~i-~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTGKRLQTV-KLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEETTTEEEEECTTTCCEEEEE-ECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred CEEEEEcCCCEEEEEcCCCceEEEEE-ECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 55555566778999999866432211 111 1356788887 78776665554
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.74 E-value=5e-07 Score=81.50 Aligned_cols=232 Identities=13% Similarity=0.101 Sum_probs=129.6
Q ss_pred CCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeecccCCcce------
Q 019384 30 HSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPV------ 103 (342)
Q Consensus 30 ~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V------ 103 (342)
++..+..++.|+.|..+|..+++.+......+.+.+.....++.++.++.++.+..+|..+++..-.......+
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 45677788999999999999887665444333332222223567788888999999998887643211111111
Q ss_pred eEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCC---Cc---E-EEEeccCCeEEEEEcCCeEEEEeCCCC
Q 019384 104 RCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQP---ER---V-YSLSLVGNRLVVATAGRHVNVYDLRNM 176 (342)
Q Consensus 104 ~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~---~~---v-~~~s~~~~~~~~~s~d~~v~iwd~~~~ 176 (342)
...... +..++.++.++.|..+|.+++.............. .. + ......++.+++++.++.+..+|.+++
T Consensus 182 ~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 111222 45788888999999999876432111111000000 00 0 011123567888888999999999887
Q ss_pred CCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCC
Q 019384 177 SQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG 256 (342)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~ 256 (342)
+...... .. ....+. .++..+++++.++.+ ..+|..+.+. .|.... ... . .+.+... .+.
T Consensus 260 ~~~w~~~---~~-~~~~~~--~~~~~l~~~~~~g~l--~~~d~~tG~~--~w~~~~----~~~-~---~~~~~~~--~~~ 319 (376)
T 3q7m_A 260 QIMWKRE---LG-SVNDFI--VDGNRIYLVDQNDRV--MALTIDGGVT--LWTQSD----LLH-R---LLTSPVL--YNG 319 (376)
T ss_dssp CEEEEEC---CC-CEEEEE--EETTEEEEEETTCCE--EEEETTTCCE--EEEECT----TTT-S---CCCCCEE--ETT
T ss_pred cEEeecc---CC-CCCCce--EECCEEEEEcCCCeE--EEEECCCCcE--EEeecc----cCC-C---cccCCEE--ECC
Confidence 5432211 11 112222 234556666666654 4577654321 221110 000 0 1111222 256
Q ss_pred eEEEecCCCeEEEEeCCCceeeeccCC
Q 019384 257 TFATGGCDGFVNVWDGNNKKRLYQYSK 283 (342)
Q Consensus 257 ~l~sgs~Dg~I~iWd~~~~~~~~~~~~ 283 (342)
.|+.++.+|.|+++|.++++.+.....
T Consensus 320 ~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 320 NLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 788899999999999999987765543
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.73 E-value=2.9e-06 Score=76.47 Aligned_cols=231 Identities=13% Similarity=-0.012 Sum_probs=129.3
Q ss_pred CCCeEEEEeCCCcEEEEECCCceeeeeeec----------CCceEEEEEeCCCCeEEEecCCcEEEEEeccCceee-ccc
Q 019384 30 HSDHLLVSSWDKSVRLYDASANVLRGEFMH----------GGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDI-LGK 98 (342)
Q Consensus 30 ~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h----------~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~-~~~ 98 (342)
++..|..++.++.|..+|..+++.+..... ...+.+.....++.++.++.++.+..+|..+++..- ...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 356788888999999999988876544433 223333333456778888999999999988877431 111
Q ss_pred CCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCc----EEEEeccCCeEEEEEcCCeEEEEeCC
Q 019384 99 HDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPER----VYSLSLVGNRLVVATAGRHVNVYDLR 174 (342)
Q Consensus 99 h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~----v~~~s~~~~~~~~~s~d~~v~iwd~~ 174 (342)
........... ++.++.++.++.|..+|.+++... ...... .... .......++.+++++.++.+..+|..
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~--W~~~~~-~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVK--WTVNLD-MPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEE--EEEECC-C-----CCCCCCEEETTEEEECCTTTEEEEEETT
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEE--EEEeCC-CCceeecCCCCcEEECCEEEEEcCCCEEEEEECC
Confidence 11111111222 457888889999999998765321 111110 0000 01112235677888888999999998
Q ss_pred CCCCccccccccccee--eEE---EEEe--eCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 175 NMSQPEQRRESSLKYQ--TRC---VRCY--PNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 175 ~~~~~~~~~~~~~~~~--~~~---v~~~--~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
+++............. ... +... ..+..+++++.++.+ ..+|..+... .|.... . ...
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l--~~~d~~tG~~--~w~~~~------~-----~~~ 271 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL--TALDLRSGQI--MWKREL------G-----SVN 271 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE--EEEETTTCCE--EEEECC------C-----CEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE--EEEECCCCcE--EeeccC------C-----CCC
Confidence 8754322111100000 000 0001 123456666666654 4577643322 122110 0 122
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS 282 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~ 282 (342)
.+.. ++..|+.++.++.|..+|.++++.+....
T Consensus 272 ~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 272 DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 2333 36678888889999999999988776544
No 224
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.71 E-value=2.6e-06 Score=74.36 Aligned_cols=196 Identities=10% Similarity=0.060 Sum_probs=112.9
Q ss_pred CCCCeEEEEEcCC-CCeEEEEeCCCcEEEEECCCceeeee-ee-----cCCceEEEEEeCCCCeEEEec-C---------
Q 019384 18 PSDGISNLRFSNH-SDHLLVSSWDKSVRLYDASANVLRGE-FM-----HGGPVLDCCFHDDSSGFSASA-D--------- 80 (342)
Q Consensus 18 ~~~~V~~l~fs~~-~~~l~s~s~Dgti~vwd~~~~~~~~~-~~-----h~~~V~~~~~~~~~~~~s~s~-D--------- 80 (342)
+...+..++++++ ++++++. .++.|.+||.. ++.... .. ....+.++++.+++.++.++. +
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 3467999999999 6655544 44578999988 655433 21 123478899988777765443 3
Q ss_pred ------CcEEEEEeccCceeecccCCcceeEEEEe----CCCCEE-EEeeCCCcEEEEcCC-CCCCcceeeeeecCCC--
Q 019384 81 ------HTVRRLVFSHGKEDILGKHDAPVRCIEYS----YAAGQV-ITGSWDKSLKCWDPR-GASGQERTLVGTYPQP-- 146 (342)
Q Consensus 81 ------~~i~~w~~~~~~~~~~~~h~~~V~~~~~~----~~~~~l-~sgs~D~~I~iWd~~-~~~~~~~~~~~~~~~~-- 146 (342)
+.+..++.. +....+..+......++++ ++++.| ++...++.|.+||++ .+.......+......
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred cccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence 344444443 3333333333456889999 988655 455678899999975 2211001111111111
Q ss_pred CcEEEEe--ccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeech
Q 019384 147 ERVYSLS--LVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLS 220 (342)
Q Consensus 147 ~~v~~~s--~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~ 220 (342)
.....+. .+++.+++...++.|.+||..+++.... ...+ ...+.++++.+++..+++++ .++.+ ..|+..
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~-~~~~-~~~~~~i~~~~dg~~l~v~~~~~~~l--~~~~~~ 298 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR-IRCP-FEKPSNLHFKPQTKTIFVTEHENNAV--WKFEWQ 298 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE-EECS-SSCEEEEEECTTSSEEEEEETTTTEE--EEEECS
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE-EeCC-CCCceeEEECCCCCEEEEEeCCCCeE--EEEeCC
Confidence 2233344 4455555555778999999875432211 1111 13467888889988555554 44444 446653
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.70 E-value=4.3e-06 Score=74.05 Aligned_cols=185 Identities=16% Similarity=0.039 Sum_probs=107.6
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeec-----CCceEEEEEeCCCCeEEEecC-----CcEEEEEe
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMH-----GGPVLDCCFHDDSSGFSASAD-----HTVRRLVF 88 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h-----~~~V~~~~~~~~~~~~s~s~D-----~~i~~w~~ 88 (342)
...|.+++|+++++++++. .+ .|.+||..++++...... ...+.++.+.+++.++.++.+ ....+|.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 3579999999999877754 44 499999987765433221 235788999888877655432 23445555
Q ss_pred ccCceeecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCC--CC-CCcceeeeeecC-CCCcEEEEec--cCCeEEE
Q 019384 89 SHGKEDILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPR--GA-SGQERTLVGTYP-QPERVYSLSL--VGNRLVV 161 (342)
Q Consensus 89 ~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~--~~-~~~~~~~~~~~~-~~~~v~~~s~--~~~~~~~ 161 (342)
..++...+..+......++|+|+++.| ++.+.++.|.+||++ ++ .......+.... .......+.. +++..++
T Consensus 167 ~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 167 AKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp ETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE
T ss_pred eCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 434333333333456789999999866 455667899999975 33 211111121111 1122334444 4544444
Q ss_pred EEcCCeEEEEeCCCCCCcccccccccceeeEEEEEe-eCCceEEEEcc
Q 019384 162 ATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCY-PNGTGYALSSV 208 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~ 208 (342)
...++.|..||.. ++.. .....+ ...+.++++. ++++.+++++.
T Consensus 247 ~~~~~~v~~~d~~-g~~~-~~i~~~-~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 247 RWGEGAVDRYDTD-GNHI-ARYEVP-GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EETTTEEEEECTT-CCEE-EEEECS-CSBEEEEEEESTTSCEEEEEEB
T ss_pred EeCCCEEEEECCC-CCEE-EEEECC-CCCcEEEEEecCCCCEEEEEec
Confidence 4456789999983 3221 111111 1246788887 77766655543
No 226
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.67 E-value=8.6e-06 Score=79.41 Aligned_cols=289 Identities=12% Similarity=0.072 Sum_probs=158.8
Q ss_pred CCeEEEEeCCCcEEEEECCCceeeeeeecC-----CceEEEEEeCCCCeEEEec------CCcEEEEEeccCceee-c--
Q 019384 31 SDHLLVSSWDKSVRLYDASANVLRGEFMHG-----GPVLDCCFHDDSSGFSASA------DHTVRRLVFSHGKEDI-L-- 96 (342)
Q Consensus 31 ~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~-----~~V~~~~~~~~~~~~s~s~------D~~i~~w~~~~~~~~~-~-- 96 (342)
+.+|+.++.|+.|..+|..+++++...... ..+.+.-...++.++.++. ++.+..+|..+++..- +
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 467888889999999999988765543221 1111111112455555443 4778888887776321 1
Q ss_pred -cc----------------------------CCcceeEEEEeCCCCEEEEeeCCC-------------------cEEEEc
Q 019384 97 -GK----------------------------HDAPVRCIEYSYAAGQVITGSWDK-------------------SLKCWD 128 (342)
Q Consensus 97 -~~----------------------------h~~~V~~~~~~~~~~~l~sgs~D~-------------------~I~iWd 128 (342)
.+ +......+++.++.++++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 00 111122468888888888887766 389999
Q ss_pred CCCCCCcceeeeeecCC-------CC--cEEEEeccCC---eEEEEEcCCeEEEEeCCCCCCcccccccc------c---
Q 019384 129 PRGASGQERTLVGTYPQ-------PE--RVYSLSLVGN---RLVVATAGRHVNVYDLRNMSQPEQRRESS------L--- 187 (342)
Q Consensus 129 ~~~~~~~~~~~~~~~~~-------~~--~v~~~s~~~~---~~~~~s~d~~v~iwd~~~~~~~~~~~~~~------~--- 187 (342)
.+++.. ........+ .. ....+..+++ .++.++.++.+.++|..+++......... +
T Consensus 277 ~~tG~~--~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 277 PDTGKL--AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp TTTCCE--EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred CCCCce--eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 876543 222221111 11 1223344554 47778889999999998875431100000 0
Q ss_pred cee-------------------------eEEEEEeeCCceEEEEcc----------------------------------
Q 019384 188 KYQ-------------------------TRCVRCYPNGTGYALSSV---------------------------------- 208 (342)
Q Consensus 188 ~~~-------------------------~~~v~~~~~~~~~~~~s~---------------------------------- 208 (342)
... -..++++|+...+.+...
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 000 001345565554443211
Q ss_pred CCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCc-c
Q 019384 209 EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPT-S 287 (342)
Q Consensus 209 ~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~-~ 287 (342)
...-.+..||..+.+ ..|....+. +.....+...+..++.|+.|+.+++||.++++.+..+..... .
T Consensus 435 ~~~g~l~A~D~~tG~--~~W~~~~~~----------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~ 502 (668)
T 1kv9_A 435 VVSGALLAWDPVKQK--AAWKVPYPT----------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIV 502 (668)
T ss_dssp GCEEEEEEEETTTTE--EEEEEEESS----------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CccceEEEEeCCCCc--EEEEccCCC----------CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcc
Confidence 011334556664332 222222110 122223444678888999999999999999998876653322 1
Q ss_pred eEEEEECCCCC-EEEEEEecccc---------CCCCCCCCCcEEEEEccCCccccC
Q 019384 288 IAALSFSRDGR-LLAVASSYTFE---------EGDKPHEPDAIFVRSVNEIEVKPK 333 (342)
Q Consensus 288 V~~v~~spdg~-~las~s~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 333 (342)
-.-+.+..||+ |++.++..+.. .-.....++.|+++.+.....-|.
T Consensus 503 ~~p~~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~p~ 558 (668)
T 1kv9_A 503 AAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQLPP 558 (668)
T ss_dssp SCCEEEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCCCC
T ss_pred cCceEEEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCccCCCCC
Confidence 13455667888 77766653221 112334577899998865444444
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.63 E-value=7.5e-06 Score=74.72 Aligned_cols=228 Identities=13% Similarity=0.029 Sum_probs=122.1
Q ss_pred EEEecCCcEEEEEeccCc-----eeecc------cCC-cceeEEEEeCCCCEEEEeeCC------CcEEEEcCCCCCCcc
Q 019384 75 FSASADHTVRRLVFSHGK-----EDILG------KHD-APVRCIEYSYAAGQVITGSWD------KSLKCWDPRGASGQE 136 (342)
Q Consensus 75 ~s~s~D~~i~~w~~~~~~-----~~~~~------~h~-~~V~~~~~~~~~~~l~sgs~D------~~I~iWd~~~~~~~~ 136 (342)
+++-.++.|.++|+.+.. ...++ ... ..-..+...|++ .++++..+ +.|.+.|.++.....
T Consensus 100 v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 100 VPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLG 178 (462)
T ss_dssp EEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEE
T ss_pred EccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEE
Confidence 356678889999986542 11221 111 133456778988 77776655 789999987543211
Q ss_pred eeeeeecC-CCCcEEEEeccCCeEEEEE-------------------cCCeEEEEeCCCCCCcccccccc-cceeeEEEE
Q 019384 137 RTLVGTYP-QPERVYSLSLVGNRLVVAT-------------------AGRHVNVYDLRNMSQPEQRRESS-LKYQTRCVR 195 (342)
Q Consensus 137 ~~~~~~~~-~~~~v~~~s~~~~~~~~~s-------------------~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~v~ 195 (342)
........ ....-+.++++.+.+++.. .+.+|.+||+.+.+. ....... .......+.
T Consensus 179 ~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~tI~vg~~g~~P~~i~ 257 (462)
T 2ece_A 179 KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHSLTLGEENRMALELR 257 (462)
T ss_dssp ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEEEESCTTEEEEEEEE
T ss_pred EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeEEecCCCCCccceeE
Confidence 11111100 0011134566677666553 368999999987522 2221111 111233344
Q ss_pred --EeeCCceEEEEc------cCCeEEEEEeechhhhhcccceeeeEEecCCCC--------ceeeeeeEEEEcCCCCeEE
Q 019384 196 --CYPNGTGYALSS------VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGR--------DIVYPVNAIAFHPIYGTFA 259 (342)
Q Consensus 196 --~~~~~~~~~~~s------~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~--------~~~~~v~~v~~sp~~~~l~ 259 (342)
++|+++...+++ .++++.++.||.......+...+....- .... ........|.+||||++|.
T Consensus 258 f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v-~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 258 PLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL-EGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp ECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC-CSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred eeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc-cccccccccccccCCCceeEEEECCCCCEEE
Confidence 489998776665 4555555444421100001111111100 0000 0012367799999999875
Q ss_pred E-ecCCCeEEEEeCCC---ceeeeccCCC--------------CcceEEEEECCCCCEEEEEEe
Q 019384 260 T-GGCDGFVNVWDGNN---KKRLYQYSKY--------------PTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 260 s-gs~Dg~I~iWd~~~---~~~~~~~~~~--------------~~~V~~v~~spdg~~las~s~ 305 (342)
. .-..+.|.+||+.+ .+.+..+.-. ...-..+++||||++|.++.+
T Consensus 337 VSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp EEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 4 45578999999853 3444333211 012478999999999998874
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.61 E-value=1.8e-07 Score=88.21 Aligned_cols=260 Identities=10% Similarity=0.028 Sum_probs=138.2
Q ss_pred CCCeEEEE-eCCCcEEEEECCCceeee--eeecCCceEEEEE-e-CCCCeE-EEe------------------cCCcEEE
Q 019384 30 HSDHLLVS-SWDKSVRLYDASANVLRG--EFMHGGPVLDCCF-H-DDSSGF-SAS------------------ADHTVRR 85 (342)
Q Consensus 30 ~~~~l~s~-s~Dgti~vwd~~~~~~~~--~~~h~~~V~~~~~-~-~~~~~~-s~s------------------~D~~i~~ 85 (342)
||++|... ..+++|.+.|+.+.++.. .+-....+..+++ . |++..+ .++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 77777655 456789999999887555 3333456778887 3 666554 442 2335666
Q ss_pred EEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCc-EEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEc
Q 019384 86 LVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKS-LKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATA 164 (342)
Q Consensus 86 w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~-I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~ 164 (342)
.|.++.+......-...-..++++|+++++++.+.+.. ....+..+. .. ...+..... .+...+..+++....
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~-~~-~d~v~V~~~-~~~~~~v~~Gk~~~i--- 253 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTA-AE-MDHIVVFNI-AEIEKAIAAGDYQEL--- 253 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTC-CS-EEEEEEEEH-HHHHHHHHHTCSEEE---
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccc-cc-cceEEEeec-cceeEeccCCCeeEE---
Confidence 77766542211000012345778999998887776531 100010000 00 000000000 000001122333222
Q ss_pred CCeEEEEeCCC--CCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc----c--cceeeeEEec
Q 019384 165 GRHVNVYDLRN--MSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA----K--KYAFKCHRKS 236 (342)
Q Consensus 165 d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~----~--~~~~~~h~~~ 236 (342)
+.|.+.|.++ .+.. . ...+......++.++|||++++++..... .+.++|+...... . ...... ..
T Consensus 254 -~~V~VID~~~~~~~~~-~-~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~-~VsVid~~~~~~~~~~~l~~~~~v~~--~v 327 (595)
T 1fwx_A 254 -NGVKVVDGRKEASSLF-T-RYIPIANNPHGCNMAPDKKHLCVAGKLSP-TVTVLDVTRFDAVFYENADPRSAVVA--EP 327 (595)
T ss_dssp -TTEEEEECSGGGCCSS-E-EEEEEESSCCCEEECTTSSEEEEECTTSS-BEEEEEGGGHHHHHHSCCCGGGGEEE--CC
T ss_pred -CcEEEEeCcccCCcee-E-EEEecCCCceEEEEcCCCCEEEEeCCCCC-eEEEEECcccccccccccCcccceEE--Ec
Confidence 4599999987 3210 0 11122234567889999998877664332 3456888643210 0 000111 11
Q ss_pred CCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC----------ceeeeccCCCCc-----ceEEEEECCCCCEEE
Q 019384 237 EAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN----------KKRLYQYSKYPT-----SIAALSFSRDGRLLA 301 (342)
Q Consensus 237 ~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~----------~~~~~~~~~~~~-----~V~~v~~spdg~~la 301 (342)
..+. ...-++|+|+|..+++.-.|++|.+||+++ ...+.++.-|-. .-.+++++|||++|.
T Consensus 328 ~vG~----gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 328 ELGL----GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp BCCS----CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred CCCC----CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 1111 245689999995567778899999999876 334444443322 223446799999999
Q ss_pred EEEe
Q 019384 302 VASS 305 (342)
Q Consensus 302 s~s~ 305 (342)
+...
T Consensus 404 ~~Nk 407 (595)
T 1fwx_A 404 CLSK 407 (595)
T ss_dssp EEES
T ss_pred EcCC
Confidence 8875
No 229
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.61 E-value=2.4e-05 Score=74.97 Aligned_cols=54 Identities=13% Similarity=0.240 Sum_probs=39.7
Q ss_pred CCCeEEEecCCCeEEEEeCCCceeeeccCCCC-cceEEEEECCCCC-EEEEEEecc
Q 019384 254 IYGTFATGGCDGFVNVWDGNNKKRLYQYSKYP-TSIAALSFSRDGR-LLAVASSYT 307 (342)
Q Consensus 254 ~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~-~las~s~~~ 307 (342)
.+..++.++.||.++.||.++++.+.+++... ....-+.|..||+ |+++.+.++
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G~g 538 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYGVG 538 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCC
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEccCC
Confidence 46778889999999999999999887664322 2234567778988 677766653
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.57 E-value=5.7e-06 Score=80.75 Aligned_cols=268 Identities=13% Similarity=0.056 Sum_probs=146.3
Q ss_pred CCeEEEEeCCCcEEEEECCCceeeeeeecCCc-----------e-EEEEEeCCCCeEEEecCCcEEEEEeccCceee-cc
Q 019384 31 SDHLLVSSWDKSVRLYDASANVLRGEFMHGGP-----------V-LDCCFHDDSSGFSASADHTVRRLVFSHGKEDI-LG 97 (342)
Q Consensus 31 ~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~-----------V-~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~-~~ 97 (342)
+..|..++.++.|.-+|..+++.+..+..... + ..+.+ .++.++.++.|+.+..+|..+++..- +.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 45677788899999999999886655432211 1 12223 45677888999999999998887431 11
Q ss_pred cC-C----cceeEEEEeCCCCEEEEeeC------CCcEEEEcCCCCCCcceeeeeecCC---------------------
Q 019384 98 KH-D----APVRCIEYSYAAGQVITGSW------DKSLKCWDPRGASGQERTLVGTYPQ--------------------- 145 (342)
Q Consensus 98 ~h-~----~~V~~~~~~~~~~~l~sgs~------D~~I~iWd~~~~~~~~~~~~~~~~~--------------------- 145 (342)
.+ . ..+.+--.. .++.++.++. ++.|..+|.+++... ........
T Consensus 156 ~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~--W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERK--WRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp TTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEE--EEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred CCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEE--EEeccCCCCcccccccccccccccccccc
Confidence 11 0 112211111 2345555543 789999998765431 11111000
Q ss_pred -----------CCcEEEEeccCCeEEEEEcCC-------------------eEEEEeCCCCCCccccccccc-------c
Q 019384 146 -----------PERVYSLSLVGNRLVVATAGR-------------------HVNVYDLRNMSQPEQRRESSL-------K 188 (342)
Q Consensus 146 -----------~~~v~~~s~~~~~~~~~s~d~-------------------~v~iwd~~~~~~~~~~~~~~~-------~ 188 (342)
......++...+.+++++.++ .|..+|.++++..-....... .
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 001234555566777776553 488899988764322211111 1
Q ss_pred eeeEEEEEeeCC---ceEEEEccCCeEEEEEeechhhhhcccceeee---EEec-CCCCce-------------------
Q 019384 189 YQTRCVRCYPNG---TGYALSSVEGRVAMEFFDLSEASQAKKYAFKC---HRKS-EAGRDI------------------- 242 (342)
Q Consensus 189 ~~~~~v~~~~~~---~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~---h~~~-~~~~~~------------------- 242 (342)
.....+....+| ..++.++.++.+ +++|..+.+......+.. .... ..+...
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l--~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFF--FVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEE--EEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEE--EEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 112222233455 456677777754 557765443221111000 0000 000000
Q ss_pred -eeeeeEEEEcCCCCeEEEecC-------------------------------------------CCeEEEEeCCCceee
Q 019384 243 -VYPVNAIAFHPIYGTFATGGC-------------------------------------------DGFVNVWDGNNKKRL 278 (342)
Q Consensus 243 -~~~v~~v~~sp~~~~l~sgs~-------------------------------------------Dg~I~iWd~~~~~~~ 278 (342)
...-..++|+|++.++++... .|+|..||..+++.+
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 000125789998887766432 278999999999988
Q ss_pred eccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 279 YQYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 279 ~~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
.++. +..++++..++.++.++..++.
T Consensus 471 W~~~-~~~~~~~g~~~~~g~~v~~g~~ 496 (677)
T 1kb0_A 471 WSVE-HVSPWNGGTLTTAGNVVFQGTA 496 (677)
T ss_dssp EEEE-ESSSCCCCEEEETTTEEEEECT
T ss_pred eecC-CCCCCcCcceEeCCCEEEEECC
Confidence 7664 3344566667788887777754
No 231
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.55 E-value=1.7e-05 Score=75.87 Aligned_cols=260 Identities=12% Similarity=0.074 Sum_probs=137.8
Q ss_pred CCeEEEEeCCCcEEEEECCCceeeeeeecCC-----ceEEEEEeCCCCeEEEec------CCcEEEEEeccCceee---c
Q 019384 31 SDHLLVSSWDKSVRLYDASANVLRGEFMHGG-----PVLDCCFHDDSSGFSASA------DHTVRRLVFSHGKEDI---L 96 (342)
Q Consensus 31 ~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~-----~V~~~~~~~~~~~~s~s~------D~~i~~w~~~~~~~~~---~ 96 (342)
+.+|+.++.|+.+..+|..+++.+......+ .+.+.-...++.++.++. ++.+..+|..+++..- .
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 4577788899999999999887655432221 222111112556666654 7889888888876421 1
Q ss_pred ccCC-----------------------------------cce-eEEEEeCCCCEEEEeeC------------C----CcE
Q 019384 97 GKHD-----------------------------------APV-RCIEYSYAAGQVITGSW------------D----KSL 124 (342)
Q Consensus 97 ~~h~-----------------------------------~~V-~~~~~~~~~~~l~sgs~------------D----~~I 124 (342)
.... ..+ ..+++.++...++.++. | +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 1000 001 23566676667765553 2 358
Q ss_pred EEEcCCCCCCcceeeeeecC-------C-CCcE-EEEeccCC---eEEEEEcCCeEEEEeCCCCCCcccccccc-cc---
Q 019384 125 KCWDPRGASGQERTLVGTYP-------Q-PERV-YSLSLVGN---RLVVATAGRHVNVYDLRNMSQPEQRRESS-LK--- 188 (342)
Q Consensus 125 ~iWd~~~~~~~~~~~~~~~~-------~-~~~v-~~~s~~~~---~~~~~s~d~~v~iwd~~~~~~~~~~~~~~-~~--- 188 (342)
..+|.+++.. ....+... . ...+ .....+++ .++.++.++.+..+|..+++......... ..
T Consensus 275 ~Ald~~tG~~--~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 275 WGRDLDTGMA--KWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEETTTCCE--EEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEecCCCcE--EEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 8899876542 22221111 0 1112 22223443 35667778899999998875432111000 00
Q ss_pred -------ee---------------e-----------EEEEEeeCCceEEEEccC--------------------------
Q 019384 189 -------YQ---------------T-----------RCVRCYPNGTGYALSSVE-------------------------- 209 (342)
Q Consensus 189 -------~~---------------~-----------~~v~~~~~~~~~~~~s~~-------------------------- 209 (342)
.. . ..++++|++..+++.+.+
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 00 0 123566666665554321
Q ss_pred ---------CeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec
Q 019384 210 ---------GRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ 280 (342)
Q Consensus 210 ---------~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~ 280 (342)
..-.+..+|..+.+ ..|..... .++....+...+..++.++.||.|+.||.++++.+.+
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~--~~W~~~~~----------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGK--AKWTKWEK----------FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCC--EEEEEEES----------SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cCccccCCCCCCeEEEEECCCCC--EEEEecCC----------CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 12344556664332 22222110 0122222233467777899999999999999998876
Q ss_pred cCCCC-cceEEEEECCCCCEEEEEE
Q 019384 281 YSKYP-TSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 281 ~~~~~-~~V~~v~~spdg~~las~s 304 (342)
+.... ..-..+.|..||+.++...
T Consensus 501 ~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 501 FKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EeCCCCcEeeeEEEEECCEEEEEEE
Confidence 65321 1223455778998554433
No 232
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.51 E-value=1.5e-05 Score=72.89 Aligned_cols=184 Identities=9% Similarity=0.090 Sum_probs=110.5
Q ss_pred EEEcCCCCeEEEEeCCC--cEEEEECCCceeeeee----e-cCCceEEEEEeC-CCCeEEEecCCcEEEEEeccCceeec
Q 019384 25 LRFSNHSDHLLVSSWDK--SVRLYDASANVLRGEF----M-HGGPVLDCCFHD-DSSGFSASADHTVRRLVFSHGKEDIL 96 (342)
Q Consensus 25 l~fs~~~~~l~s~s~Dg--ti~vwd~~~~~~~~~~----~-h~~~V~~~~~~~-~~~~~s~s~D~~i~~w~~~~~~~~~~ 96 (342)
++|+++++.|+.+..++ .|.+|+...+...... . ....+.++++.+ ++.++.+..++.|..|+..++....+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999999888876 7888887654332222 2 345678899987 67777777778899999887664433
Q ss_pred -----ccCCcce--eEEEEeCC-CCEEEEeeCCCcEEEEcCCCCCCcceeeeeec------------CCCCcE--EEEec
Q 019384 97 -----GKHDAPV--RCIEYSYA-AGQVITGSWDKSLKCWDPRGASGQERTLVGTY------------PQPERV--YSLSL 154 (342)
Q Consensus 97 -----~~h~~~V--~~~~~~~~-~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~------------~~~~~v--~~~s~ 154 (342)
.++...- ..++|+|+ +.++++-...+.|+.||.... ........ ..-... ++++.
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 1222222 38999995 455566677889999997532 11111111 000112 34444
Q ss_pred cCCeEEEEE-cCCeEEEEeCCCCCCccccccc-------------ccceeeEEEEEeeCCceEEEEccCCeE
Q 019384 155 VGNRLVVAT-AGRHVNVYDLRNMSQPEQRRES-------------SLKYQTRCVRCYPNGTGYALSSVEGRV 212 (342)
Q Consensus 155 ~~~~~~~~s-~d~~v~iwd~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~s~~~~~ 212 (342)
+++.+++-+ .++.|+.||+.++... ..... ..-.....+++.+++..+++...++.+
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~I 403 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAI 403 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeE
Confidence 566555555 6789999997654211 00000 000235678888886555554444443
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.46 E-value=6.7e-05 Score=66.01 Aligned_cols=240 Identities=12% Similarity=0.008 Sum_probs=133.9
Q ss_pred CeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee--------------------cCCceEEEEEeC-CCCeEEEec
Q 019384 21 GISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM--------------------HGGPVLDCCFHD-DSSGFSASA 79 (342)
Q Consensus 21 ~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~--------------------h~~~V~~~~~~~-~~~~~s~s~ 79 (342)
....++|+++++++.++..++.|..||..++.+..... ..+.+.++++.+ ++.++.+..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 45678899999888888899999999987654432211 113478889985 777877766
Q ss_pred CCcEEEEEeccCceeeccc-----CCcceeEEEEeC-CCCEEEEeeC-----------------CCcEEEEcCCCCCCcc
Q 019384 80 DHTVRRLVFSHGKEDILGK-----HDAPVRCIEYSY-AAGQVITGSW-----------------DKSLKCWDPRGASGQE 136 (342)
Q Consensus 80 D~~i~~w~~~~~~~~~~~~-----h~~~V~~~~~~~-~~~~l~sgs~-----------------D~~I~iWd~~~~~~~~ 136 (342)
.+.+..++..++....+.. .......+++.+ ++...++-.. ++.|..||..+...
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-- 177 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET-- 177 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE--
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE--
Confidence 6667777765443322211 113467899999 8876665432 36788888653321
Q ss_pred eeeeeecCCCCcEEEEeccCCeEEEE-EcCCeEEEEeCCCCCCcc-cccccccceeeEEEEEeeCCceEEEEcc------
Q 019384 137 RTLVGTYPQPERVYSLSLVGNRLVVA-TAGRHVNVYDLRNMSQPE-QRRESSLKYQTRCVRCYPNGTGYALSSV------ 208 (342)
Q Consensus 137 ~~~~~~~~~~~~v~~~s~~~~~~~~~-s~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~s~------ 208 (342)
.........+. -+.++.+++.++.+ +..+.|..||+....... .... .... ...+++.++|..+++...
T Consensus 178 ~~~~~~~~~p~-gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 178 TLLLKELHVPG-GAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEEESCCC-EEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EEEEEECTTSCEEEEEEEETTSST
T ss_pred EEeccCCccCc-ceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CCCeEECCCCCEEEEecCcccccc
Confidence 11122222222 23566666656555 556889999987532111 1111 1122 566778888875444333
Q ss_pred --CCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCC
Q 019384 209 --EGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 209 --~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~ 274 (342)
.....+..+|.. ......+.. ..+.. ...+.++++ .++..+++....+.|.+++...
T Consensus 255 ~~~~~~~v~~~d~~-G~~~~~~~~------~~g~~-~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 255 HGRVDPKGIKFDEF-GNILEVIPL------PPPFA-GEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TSCEEEEEEEECTT-SCEEEEEEC------CTTTT-TSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cCCCccEEEEECCC-CCEEEEEEC------CCCCc-cccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 112344556642 111111110 01100 113555666 3566666666788899988764
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.45 E-value=0.0005 Score=58.51 Aligned_cols=245 Identities=11% Similarity=0.072 Sum_probs=135.8
Q ss_pred CeEEEEeCCCcEEEEECCCceee-----eee-ecCCceEEEEEeC-CCCeEE-EecCCcEEEEEeccCceeec-ccCCcc
Q 019384 32 DHLLVSSWDKSVRLYDASANVLR-----GEF-MHGGPVLDCCFHD-DSSGFS-ASADHTVRRLVFSHGKEDIL-GKHDAP 102 (342)
Q Consensus 32 ~~l~s~s~Dgti~vwd~~~~~~~-----~~~-~h~~~V~~~~~~~-~~~~~s-~s~D~~i~~w~~~~~~~~~~-~~h~~~ 102 (342)
++|+-+.. +.|+.+++.+.... ... .....+.+++|.+ ++.++. -...+.|..++........+ ......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34444443 47888888754321 111 1234567889986 455654 44567888888876543322 222246
Q ss_pred eeEEEEeCCCCEEE-EeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEE--EEeccCCeEEEEEc---CCeEEEEeCCCC
Q 019384 103 VRCIEYSYAAGQVI-TGSWDKSLKCWDPRGASGQERTLVGTYPQPERVY--SLSLVGNRLVVATA---GRHVNVYDLRNM 176 (342)
Q Consensus 103 V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~~~~~s~---d~~v~iwd~~~~ 176 (342)
...+++.++++.|+ +-...+.|.++|+..... ..+.... ..... .++..+..+..+.. .+.|..+++...
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~---~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR---RVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE---EEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 78999999766554 555667899999863221 1121111 12223 34443455555543 357888887543
Q ss_pred CCcccccccccceeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCC
Q 019384 177 SQPEQRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIY 255 (342)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~ 255 (342)
... ......+ .....+++.+++..+.++. ..+. |..+|...... .. .+. +.. . ...++.. .+
T Consensus 157 ~~~-~~~~~~~-~~P~gia~d~~~~~lyv~d~~~~~--I~~~~~~g~~~-~~-~~~-------~~~--~-P~gi~~d-~~ 219 (267)
T 1npe_A 157 NRR-ILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHR--AECLNPAQPGR-RK-VLE-------GLQ--Y-PFAVTSY-GK 219 (267)
T ss_dssp CCE-EEECTTC-SCEEEEEEETTTTEEEEEETTTTE--EEEEETTEEEE-EE-EEE-------CCC--S-EEEEEEE-TT
T ss_pred CcE-EEEECCC-CCCcEEEEcCCCCEEEEEECCCCE--EEEEecCCCce-EE-Eec-------CCC--C-ceEEEEe-CC
Confidence 211 1111111 2467788999876665554 4444 45577643211 11 111 001 1 2345554 34
Q ss_pred CeEEEecCCCeEEEEeCCCceeeeccCCC-CcceEEEEECCCCC
Q 019384 256 GTFATGGCDGFVNVWDGNNKKRLYQYSKY-PTSIAALSFSRDGR 298 (342)
Q Consensus 256 ~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~ 298 (342)
..+++....+.|.++|..+++.+..+... ....+.+++.||+.
T Consensus 220 ~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 220 NLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 45566666789999999988877766532 22468899999876
No 235
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.45 E-value=0.0002 Score=62.46 Aligned_cols=230 Identities=13% Similarity=0.034 Sum_probs=123.1
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecC--C-cEEEEEeccCceeec
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASAD--H-TVRRLVFSHGKEDIL 96 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D--~-~i~~w~~~~~~~~~~ 96 (342)
.....++|+++++++++-..++.|..||..+.. .......+.+.++++.+++.++.+... + .+..++..+++...+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 567899999999987777788999999987643 333334567888999888877766533 2 255556556554322
Q ss_pred cc--CCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeee-----e-cCCCCcEEEEeccCCeEEEE-EcCCe
Q 019384 97 GK--HDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVG-----T-YPQPERVYSLSLVGNRLVVA-TAGRH 167 (342)
Q Consensus 97 ~~--h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~-----~-~~~~~~v~~~s~~~~~~~~~-s~d~~ 167 (342)
.. .......++..+++..+++-+.++.|..+|..+.......... . .........++.+++.++.+ +..+.
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKML 190 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTE
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCE
Confidence 21 1122234444444433444445777877886432110000000 0 00001112233333333222 22334
Q ss_pred EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeee
Q 019384 168 VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
|..||+... . ......... .. ....
T Consensus 191 I~~~~~~~~---------------------------------------------g-~~~~~~~~~--~~-------~~P~ 215 (306)
T 2p4o_A 191 LLRIPVDST---------------------------------------------D-KPGEPEIFV--EQ-------TNID 215 (306)
T ss_dssp EEEEEBCTT---------------------------------------------S-CBCCCEEEE--ES-------CCCS
T ss_pred EEEEEeCCC---------------------------------------------C-CCCccEEEe--cc-------CCCC
Confidence 444444320 0 000000000 00 0134
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCcee--eeccCCCCcceEEEEEC---CCCCEEEEEEec
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKKR--LYQYSKYPTSIAALSFS---RDGRLLAVASSY 306 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~--~~~~~~~~~~V~~v~~s---pdg~~las~s~~ 306 (342)
.+++.++|..+++....+.|.++|.. ++. +..+........+++|. ||+..|.+++..
T Consensus 216 gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 216 DFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp SEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 57889999877777777899999976 443 32333223568999999 898877666653
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.41 E-value=0.00068 Score=67.31 Aligned_cols=270 Identities=10% Similarity=0.033 Sum_probs=158.4
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee-------cCCceEEEEEeCCCCeEEEecCCcEEEEEecc
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM-------HGGPVLDCCFHDDSSGFSASADHTVRRLVFSH 90 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-------h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~ 90 (342)
..+.|+++..+++|.+- .|..++-|..|+...+....... ....|.++....++.+..|+.++-+..|+..+
T Consensus 308 ~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~ 386 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPIT 386 (795)
T ss_dssp SSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTT
T ss_pred CCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCC
Confidence 35689999999988654 57777778888876544322111 23468888887778888888887888888776
Q ss_pred Cceeecc---------cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeee-c--CCCCcEEEEeccC-C
Q 019384 91 GKEDILG---------KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGT-Y--PQPERVYSLSLVG-N 157 (342)
Q Consensus 91 ~~~~~~~---------~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~-~--~~~~~v~~~s~~~-~ 157 (342)
+....+. -....|.++...+++..|..|+.++.|.+||.+++.. ..+.. . .....+.++..+. .
T Consensus 387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~---~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 387 QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV---ENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE---EEECTTTSCCSCSCEEEEEECSSS
T ss_pred CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE---EEeecCCCCcCCCeeEEEEECCCC
Confidence 5533221 1235789998887776466778888899999765321 11110 0 1123466666653 3
Q ss_pred eEEEEEcCCeEEEEeCCCCCCcccccc---ccc-ceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeE
Q 019384 158 RLVVATAGRHVNVYDLRNMSQPEQRRE---SSL-KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 233 (342)
Q Consensus 158 ~~~~~s~d~~v~iwd~~~~~~~~~~~~---~~~-~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h 233 (342)
.+.+++. +.+.+||..+......... ..+ ...+.++...+++... +++.++ +..||...... .+ . +
T Consensus 464 ~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~G---l~~~~~~~~~~--~~--~-~ 533 (795)
T 4a2l_A 464 NLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLW-IGGEEG---LSVFKQEGLDI--QK--A-S 533 (795)
T ss_dssp CEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEE-EEESSC---EEEEEEETTEE--EE--C-C
T ss_pred CEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEE-EEeCCc---eEEEeCCCCeE--EE--e-c
Confidence 5666776 4588899766422111000 011 1345666666666644 444444 34566533211 11 0 0
Q ss_pred EecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeee--ccCCC-CcceEEEEECCCCCEEEEEE
Q 019384 234 RKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLY--QYSKY-PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 234 ~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~--~~~~~-~~~V~~v~~spdg~~las~s 304 (342)
.....+ .....|.++...++|...++. .. -|..||.++++... ...+. ...|.++...++|++.+++.
T Consensus 534 ~~~~~~-l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 534 ILPVSN-VTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN 604 (795)
T ss_dssp CSCSCG-GGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET
T ss_pred CCCCCC-CCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC
Confidence 000000 011247888888888754443 33 68889987664332 11222 34689999999999776553
No 237
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.41 E-value=1.1e-05 Score=70.51 Aligned_cols=185 Identities=9% Similarity=-0.027 Sum_probs=107.0
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeec-----CCceEEEEEeCCCCeEE-----Eec-------
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMH-----GGPVLDCCFHDDSSGFS-----ASA------- 79 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h-----~~~V~~~~~~~~~~~~s-----~s~------- 79 (342)
.+...+..++|+++|+++++...++.|.+||.. +.......+ ...+.++.+.+++.++. +..
T Consensus 83 ~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 83 DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCC
T ss_pred CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccc
Confidence 345678999999999977766667899999986 443322211 13466788988887765 332
Q ss_pred ------CCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCC------CcEEEEcCCCCCCcceeeeeec-CCC
Q 019384 80 ------DHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWD------KSLKCWDPRGASGQERTLVGTY-PQP 146 (342)
Q Consensus 80 ------D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D------~~I~iWd~~~~~~~~~~~~~~~-~~~ 146 (342)
.+.|..++..+++...+. .....+.++|+|+++.|+.+... +.|.+||+..........+... ...
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL 240 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC
T ss_pred cccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC
Confidence 134555555455533333 44556789999999877766554 6899999753220001111111 111
Q ss_pred CcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccC
Q 019384 147 ERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE 209 (342)
Q Consensus 147 ~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~ 209 (342)
..-+.++.+++ +.+++. +.|.+||... +.. .... .+..+..+++.++++.+++++.+
T Consensus 241 pdgi~~d~~G~-lwv~~~-~gv~~~~~~g-~~~-~~~~--~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 241 PDGFCVDRGGW-LWSSSG-TGVCVFDSDG-QLL-GHIP--TPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CCSEEECTTSC-EEECCS-SEEEEECTTS-CEE-EEEE--CSSCCCEEEECTTSCEEEEEETT
T ss_pred CCeEEECCCCC-EEEecC-CcEEEECCCC-CEE-EEEE--CCCceeEEEEeCCCCEEEEEcCC
Confidence 11234555565 444554 4599999743 221 1111 11235566777887777766654
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.39 E-value=4.7e-05 Score=64.50 Aligned_cols=193 Identities=11% Similarity=0.095 Sum_probs=107.5
Q ss_pred eeeeeecCCce--EEEEEeCCCCeE-EEecCC--cEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEee-CCCcEEE
Q 019384 53 LRGEFMHGGPV--LDCCFHDDSSGF-SASADH--TVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGS-WDKSLKC 126 (342)
Q Consensus 53 ~~~~~~h~~~V--~~~~~~~~~~~~-s~s~D~--~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs-~D~~I~i 126 (342)
+..++-|...- ..+.|+ ++.++ +++.++ .|+.+|+.+++...-..-..........++++.|.... .++.+.+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 44555676543 678888 45665 666665 89999999887432111112232222233455665544 4788999
Q ss_pred EcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEE
Q 019384 127 WDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALS 206 (342)
Q Consensus 127 Wd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 206 (342)
+|.++... +........-..++.+++.++....+++|.++|..+.+.. ..+. ++
T Consensus 112 ~D~~t~~~-----~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~------------~~I~---------V~ 165 (262)
T 3nol_A 112 WNIRNLRQ-----VRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPV------------RTIT---------VT 165 (262)
T ss_dssp EETTTCCE-----EEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEE------------EEEE---------CE
T ss_pred EECccCcE-----EEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEE------------EEEE---------ec
Confidence 99875432 1111111222346666776666655677888887764211 0000 00
Q ss_pred ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC---
Q 019384 207 SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK--- 283 (342)
Q Consensus 207 s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~--- 283 (342)
. ++. . ...++.+.|. +|..++....+..|.+.|.++++.+..+.-
T Consensus 166 ~-~g~-------------~-----------------~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L 213 (262)
T 3nol_A 166 A-HGE-------------E-----------------LPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGI 213 (262)
T ss_dssp E-TTE-------------E-----------------CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTG
T ss_pred c-CCc-------------c-----------------ccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcC
Confidence 0 000 0 0013345554 566556666678999999998877654321
Q ss_pred -------C--CcceEEEEECCCCCEEEEEE
Q 019384 284 -------Y--PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 284 -------~--~~~V~~v~~spdg~~las~s 304 (342)
+ ....+.|||+|+++.|.+.+
T Consensus 214 ~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 214 LAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp GGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1 12459999999988655554
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.38 E-value=5.6e-05 Score=64.57 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=113.6
Q ss_pred eeeeeecCCc--eEEEEEeCCCCeEEEec---CCcEEEEEeccCcee-e--cccCCcceeEEEEeCCCCEEE-EeeCCCc
Q 019384 53 LRGEFMHGGP--VLDCCFHDDSSGFSASA---DHTVRRLVFSHGKED-I--LGKHDAPVRCIEYSYAAGQVI-TGSWDKS 123 (342)
Q Consensus 53 ~~~~~~h~~~--V~~~~~~~~~~~~s~s~---D~~i~~w~~~~~~~~-~--~~~h~~~V~~~~~~~~~~~l~-sgs~D~~ 123 (342)
...++.|... ...+.|++++.++.++. ++.|+..|..+++.. . +..+ .....+++. ++.|+ +.-.++.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCSE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecCCE
Confidence 4455566654 57899987677765543 578999999988743 2 2222 122345554 45554 4455689
Q ss_pred EEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceE
Q 019384 124 LKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGY 203 (342)
Q Consensus 124 I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 203 (342)
+.++|..+.... ..+.. . ...-..++.+++.++++..+++|.++|..+.+.. ..+
T Consensus 88 v~viD~~t~~v~--~~i~~-g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~------------~~I--------- 142 (266)
T 2iwa_A 88 GFIYDRRTLSNI--KNFTH-Q-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLI------------KKH--------- 142 (266)
T ss_dssp EEEEETTTTEEE--EEEEC-C-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEE------------EEE---------
T ss_pred EEEEECCCCcEE--EEEEC-C-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEE------------EEE---------
Confidence 999998753321 11211 1 1222457777777776666778888888664211 000
Q ss_pred EEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC
Q 019384 204 ALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK 283 (342)
Q Consensus 204 ~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~ 283 (342)
.++.. +. . ...++.+.|. ++..++....++.|.+.|..+++.+..+.-
T Consensus 143 ~Vg~~-~~-------------p-----------------~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 143 NVKYN-GH-------------R-----------------VIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp ECEET-TE-------------E-----------------CCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred EECCC-Cc-------------c-----------------cccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 00000 00 0 0014456666 666666666788999999999887665431
Q ss_pred C-----------C--cceEEEEECCCCCEEEEEEe
Q 019384 284 Y-----------P--TSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 284 ~-----------~--~~V~~v~~spdg~~las~s~ 305 (342)
. . ...+.++|+||++.|.++..
T Consensus 191 ~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 191 PNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp HHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 1 1 24589999999986665553
No 240
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.37 E-value=4.3e-05 Score=67.97 Aligned_cols=189 Identities=12% Similarity=-0.009 Sum_probs=112.0
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeC-----CCcEEEEECCCceeeeeee-------cCCceEEEEEeC-CCCeE-EEe---c
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSW-----DKSVRLYDASANVLRGEFM-------HGGPVLDCCFHD-DSSGF-SAS---A 79 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~-----Dgti~vwd~~~~~~~~~~~-------h~~~V~~~~~~~-~~~~~-s~s---~ 79 (342)
.+...+..|+|+++++++++-.. ++.|.+||+.++++...+. +...+..+++.+ ++.++ +-+ .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45678999999999877665544 5889999998877544332 123467889985 45554 444 5
Q ss_pred CCcEEEEEeccCce-eecccCC-----------------------------cceeEEEEeCCCCEEEEeeCCC-cEEEEc
Q 019384 80 DHTVRRLVFSHGKE-DILGKHD-----------------------------APVRCIEYSYAAGQVITGSWDK-SLKCWD 128 (342)
Q Consensus 80 D~~i~~w~~~~~~~-~~~~~h~-----------------------------~~V~~~~~~~~~~~l~sgs~D~-~I~iWd 128 (342)
++.|.+|++.+++. +.+.+|. ..+..++|+|+++.|+.+..++ .|..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 77899999876653 2232221 2357899999999888877766 444443
Q ss_pred CC---CCCCcce------eeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeC
Q 019384 129 PR---GASGQER------TLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPN 199 (342)
Q Consensus 129 ~~---~~~~~~~------~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 199 (342)
.. ....... ....... ...-++++.++..+++...++.|.+||..+++.. .......-.....+++.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g-~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKP-ICDGISIDKDHNIYVGDLAHSAIGVITSADRAYK-LLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECC-SCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEE-EEEECGGGSCEEEEEECTT
T ss_pred HHHhcCCCCChhhhhcceEecccCC-CCceEEECCCCCEEEEccCCCeEEEEECCCCCEE-EEEECCceecCCeeEECCC
Confidence 21 1000000 0111111 1123456666777777777889999998443211 1111111123567777777
Q ss_pred CceEEEEc
Q 019384 200 GTGYALSS 207 (342)
Q Consensus 200 ~~~~~~~s 207 (342)
+..+++.+
T Consensus 302 g~l~v~~~ 309 (343)
T 2qe8_A 302 GYLYFDCN 309 (343)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEeC
Confidence 76555544
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.37 E-value=0.0014 Score=64.98 Aligned_cols=268 Identities=9% Similarity=0.074 Sum_probs=158.4
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee--------cCCceEEEEEeCCCCeEEEecCCcEEEEEecc
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM--------HGGPVLDCCFHDDSSGFSASADHTVRRLVFSH 90 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~--------h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~ 90 (342)
.+.|+++..+++|.+.+ |..+ -|.+||..++.+..... ....|.++....++.+..|+.++-+..++..+
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~ 339 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIR 339 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCc
Confidence 56799999999887665 4445 48889987765443221 23568888888888888888888888887665
Q ss_pred Cceeecc-------cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeec------CCCCcEEEEeccC-
Q 019384 91 GKEDILG-------KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTY------PQPERVYSLSLVG- 156 (342)
Q Consensus 91 ~~~~~~~-------~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~------~~~~~v~~~s~~~- 156 (342)
.....+. -....|.++...+++. |-.|+.++.|..||..+..- ....... -....+.++..+.
T Consensus 340 ~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 340 NRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRF--TSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCE--EEECCC------CCSCSCEEEEEEETT
T ss_pred ccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcE--EEEecCCCCcccCCCCccEEEEEEcCC
Confidence 4422221 1235699998887665 55678888899999764321 1111000 0123466666643
Q ss_pred Ce-EEEEEcCCeEEEEeCCCCCCccccc-cccc-ceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeE
Q 019384 157 NR-LVVATAGRHVNVYDLRNMSQPEQRR-ESSL-KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 233 (342)
Q Consensus 157 ~~-~~~~s~d~~v~iwd~~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h 233 (342)
.. +.+++.++.+.+||..++....... ...+ ...+.++...+++. +.+++.++ +..||...... ..+. +
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt~~G---l~~~~~~~~~~-~~~~---~ 488 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWLGTLSA---LVRFNPEQRSF-TTIE---K 488 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEESSC---EEEEETTTTEE-EECC---B
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEecCc---eeEEeCCCCeE-EEcc---c
Confidence 34 8889988889999987653211110 0001 12456666666665 44454444 34577543211 1110 0
Q ss_pred EecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC-------CCCcceEEEEECCCCCEEEEEE
Q 019384 234 RKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS-------KYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 234 ~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~-------~~~~~V~~v~~spdg~~las~s 304 (342)
.... ..-....|.++...++|.+.+... +-|.+||..+++. .+. .....|.++...++|++.+++.
T Consensus 489 ~~~~-~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 489 EKDG-TPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp CTTC-CBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred cccc-cccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 0000 000112578888888877554443 5688898776554 221 1234789999999999665443
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.36 E-value=4.3e-05 Score=74.70 Aligned_cols=101 Identities=10% Similarity=0.070 Sum_probs=61.1
Q ss_pred CCeEEEEeCCCcEEEEECCCceeeeeeecCCc-----------e-EEEEEeCCCCeEEEecCCcEEEEEeccCceee-c-
Q 019384 31 SDHLLVSSWDKSVRLYDASANVLRGEFMHGGP-----------V-LDCCFHDDSSGFSASADHTVRRLVFSHGKEDI-L- 96 (342)
Q Consensus 31 ~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~-----------V-~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~-~- 96 (342)
+..|..++.++.|.-+|..+++.+..+..... + ..+.+ .++.++.++.|+.+..+|..+++..- +
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV-WKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE-ECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 45777888899999999998876655432211 1 11222 35677888999999999998887431 1
Q ss_pred cc-CC---cceeEEEEeCCCCEEEEee------CCCcEEEEcCCCCC
Q 019384 97 GK-HD---APVRCIEYSYAAGQVITGS------WDKSLKCWDPRGAS 133 (342)
Q Consensus 97 ~~-h~---~~V~~~~~~~~~~~l~sgs------~D~~I~iWd~~~~~ 133 (342)
.. +. ..+.+.-...++ .++.++ .|+.|..||.+++.
T Consensus 149 ~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGK 194 (689)
T ss_dssp CCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCc
Confidence 11 11 111111001134 454443 37899999988654
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.35 E-value=3.4e-05 Score=65.35 Aligned_cols=185 Identities=8% Similarity=-0.038 Sum_probs=107.4
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCC--cEEEEECCCceeeeeeecCCceEE--EEEeCCCCeEE-EecCCcEEEEEeccCce
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDK--SVRLYDASANVLRGEFMHGGPVLD--CCFHDDSSGFS-ASADHTVRRLVFSHGKE 93 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dg--ti~vwd~~~~~~~~~~~h~~~V~~--~~~~~~~~~~s-~s~D~~i~~w~~~~~~~ 93 (342)
......|.|+ ++.+..+++.+| .|+++|+.+++......-...... +.+. +++++. .-.++.+.++|..+.+.
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTCCE
T ss_pred CcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-CCEEEEEEeeCCEEEEEECccCcE
Confidence 3455789998 677777888776 999999999887665544444433 4443 345554 44577899999888763
Q ss_pred e-ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCC-CcEEEEeccCCeEEEEE-cCCeEEE
Q 019384 94 D-ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQP-ERVYSLSLVGNRLVVAT-AGRHVNV 170 (342)
Q Consensus 94 ~-~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~-~~v~~~s~~~~~~~~~s-~d~~v~i 170 (342)
. .+.- .. ....++++++.|+.+..+++|.++|.++........+.....+ .....+.+.+..+.++. .+++|.+
T Consensus 120 ~~ti~~-~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 120 VRSFNY-DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEEEEC-SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEE
T ss_pred EEEEEC-CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEE
Confidence 2 2221 11 1122335677776666678899999876433221122111111 11223444333444444 5678999
Q ss_pred EeCCCCCCccccccc----------ccceeeEEEEEeeCCceEEEEcc
Q 019384 171 YDLRNMSQPEQRRES----------SLKYQTRCVRCYPNGTGYALSSV 208 (342)
Q Consensus 171 wd~~~~~~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~s~ 208 (342)
.|.++++........ ......+.+++.|+++.+++.+.
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999887542211111 11124588999998776665543
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.35 E-value=0.00014 Score=62.16 Aligned_cols=194 Identities=6% Similarity=-0.094 Sum_probs=111.9
Q ss_pred CCeEEEEEcCCCCeEEEEeC--CCcEEEEECCCceeeeeeecCCc--eEEEEEeCCCCeE-EEecCCcEEEEEeccCcee
Q 019384 20 DGISNLRFSNHSDHLLVSSW--DKSVRLYDASANVLRGEFMHGGP--VLDCCFHDDSSGF-SASADHTVRRLVFSHGKED 94 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~--Dgti~vwd~~~~~~~~~~~h~~~--V~~~~~~~~~~~~-s~s~D~~i~~w~~~~~~~~ 94 (342)
.....+.|++++.+.++.+. +++|+++|+.+++......-... ...+++. +++++ +.-.++.+.++|..+.+..
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEE
Confidence 34678999998765565553 68999999999887665432222 2345554 34555 4456788999998876632
Q ss_pred -ecc-cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCC-cEEEEeccCCeEEEEE-cCCeEEE
Q 019384 95 -ILG-KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPE-RVYSLSLVGNRLVVAT-AGRHVNV 170 (342)
Q Consensus 95 -~~~-~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~s~~~~~~~~~s-~d~~v~i 170 (342)
.+. + ... ...+++|++.++.+..+++|.++|.++........+.....+. ....+.+.+..+.+.. .+++|.+
T Consensus 100 ~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 100 KNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEE
T ss_pred EEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEE
Confidence 221 2 111 1234567877766667889999998764322111222111111 1233444334454444 5689999
Q ss_pred EeCCCCCCccccccccc-----------ceeeEEEEEeeCCceEEEEc-cCCeEEEEEeec
Q 019384 171 YDLRNMSQPEQRRESSL-----------KYQTRCVRCYPNGTGYALSS-VEGRVAMEFFDL 219 (342)
Q Consensus 171 wd~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~ 219 (342)
.|..+++.........+ ....+.+++.|+++.++++. ...++ ...++
T Consensus 177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v--~~i~l 235 (266)
T 2iwa_A 177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL--FEIKL 235 (266)
T ss_dssp EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE--EEEEE
T ss_pred EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeE--EEEEE
Confidence 99998754322111110 12457899999987665554 44543 33444
No 245
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.35 E-value=1.9e-05 Score=70.98 Aligned_cols=92 Identities=5% Similarity=-0.147 Sum_probs=57.6
Q ss_pred cEEEEEeccCcee-ecccCCcceeEEEEeCCCCEEEEee----------CCCcEEEEcCCCCCCcceeeee-ec----CC
Q 019384 82 TVRRLVFSHGKED-ILGKHDAPVRCIEYSYAAGQVITGS----------WDKSLKCWDPRGASGQERTLVG-TY----PQ 145 (342)
Q Consensus 82 ~i~~w~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~sgs----------~D~~I~iWd~~~~~~~~~~~~~-~~----~~ 145 (342)
++.+.|..+.+.. .+..-..+ .++++||+++++.+. .+++|.+||+.+........+. .. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 6678888777632 33222234 699999999887765 3689999999865432111111 00 01
Q ss_pred CCcEEEEeccCCeEEEEEc--CCeEEE--EeCCC
Q 019384 146 PERVYSLSLVGNRLVVATA--GRHVNV--YDLRN 175 (342)
Q Consensus 146 ~~~v~~~s~~~~~~~~~s~--d~~v~i--wd~~~ 175 (342)
...-+.++.+++.++++.. +..+.+ +|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 1224568888888887764 356888 88865
No 246
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.33 E-value=0.00011 Score=71.42 Aligned_cols=271 Identities=10% Similarity=0.011 Sum_probs=137.9
Q ss_pred EEEEcC-CCCeEEEEeCCC-----------cEEEEECCCceeeeee----ecCCceEEEEEeCCCCeE-EEe-cCCcEEE
Q 019384 24 NLRFSN-HSDHLLVSSWDK-----------SVRLYDASANVLRGEF----MHGGPVLDCCFHDDSSGF-SAS-ADHTVRR 85 (342)
Q Consensus 24 ~l~fs~-~~~~l~s~s~Dg-----------ti~vwd~~~~~~~~~~----~h~~~V~~~~~~~~~~~~-s~s-~D~~i~~ 85 (342)
++++.+ +++.++.|+.+. .+.+||..++...... .+.....++++..+++++ .|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 567777 888888888653 5889999876543221 122223346666666765 555 3457999
Q ss_pred EEeccCceeecc-cCCcce-eEEEEeCCCCEEEEee-CC-----CcEEEEcCCCCCCcceeeee-----ecCCCCcEEEE
Q 019384 86 LVFSHGKEDILG-KHDAPV-RCIEYSYAAGQVITGS-WD-----KSLKCWDPRGASGQERTLVG-----TYPQPERVYSL 152 (342)
Q Consensus 86 w~~~~~~~~~~~-~h~~~V-~~~~~~~~~~~l~sgs-~D-----~~I~iWd~~~~~~~~~~~~~-----~~~~~~~v~~~ 152 (342)
||..+.....+. -+...- .+++..++++.++.|+ .+ ..+.+||+.+..= ..+. ..........+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W---~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW---TSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE---EEETTSCSGGGCCCCTTGGG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc---eeCCCcccccccccccccee
Confidence 998877643321 111111 2445566888888888 45 5789999864320 1110 00000000001
Q ss_pred eccCCeEEEEEcC---------CeEEEEeCCCCCCccccccccc-------ceeeEEEEEe-eCCceEEEEccCC-----
Q 019384 153 SLVGNRLVVATAG---------RHVNVYDLRNMSQPEQRRESSL-------KYQTRCVRCY-PNGTGYALSSVEG----- 210 (342)
Q Consensus 153 s~~~~~~~~~s~d---------~~v~iwd~~~~~~~~~~~~~~~-------~~~~~~v~~~-~~~~~~~~~s~~~----- 210 (342)
..++..++.++.+ ..+..||..+..-......... .....++.+. .+++.+++|+.+.
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 1223334444333 4577888876421100000000 0011223222 2566666766422
Q ss_pred ----eEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCC-----------CeEEEEeCCCc
Q 019384 211 ----RVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCD-----------GFVNVWDGNNK 275 (342)
Q Consensus 211 ----~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~D-----------g~I~iWd~~~~ 275 (342)
...+.+||..... |......... ....-.+++..|++++++.|+.+ ..+.+||.++.
T Consensus 427 ~~~~~~~v~~yd~~~~~----W~~~~~~~mp----~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSP----NTVFASNGLY----FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CCCCEEEEECCSTTSCC----EEEECTTCCS----SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cCCcceEEEcCCCCCCC----eeEEccCCCC----CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 1135567764321 1110000000 00011244567899999999865 46899998765
Q ss_pred ee--eeccCCCCcceEEEEECCCCCEEEEEEe
Q 019384 276 KR--LYQYSKYPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 276 ~~--~~~~~~~~~~V~~v~~spdg~~las~s~ 305 (342)
+- +..+........+..+.|||++|+.|+.
T Consensus 499 ~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 499 TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 42 2222222222334556799999999885
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.27 E-value=0.00031 Score=67.18 Aligned_cols=74 Identities=18% Similarity=0.294 Sum_probs=49.5
Q ss_pred CCCeEEEecCCCeEEEEeCCCceeeeccCCCCc-ceEEEEECCCCC-EEEEEEeccc----cC------CCCCCCCCcEE
Q 019384 254 IYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPT-SIAALSFSRDGR-LLAVASSYTF----EE------GDKPHEPDAIF 321 (342)
Q Consensus 254 ~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~-~V~~v~~spdg~-~las~s~~~~----~~------~~~~~~~~~~~ 321 (342)
.+..++.|+.||.++.||.++++.+.+++.... ...-+.|..||+ |+++.+.++- .- .......+.++
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G~gg~~~~~~~~~~~~~~~~~~g~~~~ 575 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFW 575 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHHCTHHHHHHTTCCCCCEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEccCCCcccccccccccccccCCCCCEEE
Confidence 467788899999999999999999877654322 123477888998 7776666432 00 01233455788
Q ss_pred EEEccC
Q 019384 322 VRSVNE 327 (342)
Q Consensus 322 ~~~~~~ 327 (342)
+|.|.+
T Consensus 576 ~f~l~~ 581 (582)
T 1flg_A 576 VFKLPS 581 (582)
T ss_dssp EEECCC
T ss_pred EEeCCC
Confidence 888743
No 248
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.24 E-value=2.1e-07 Score=84.07 Aligned_cols=149 Identities=11% Similarity=0.016 Sum_probs=74.8
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecC--CceEE-EEEeCCCCeEEEecCCcEEEEEeccCcee-e
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHG--GPVLD-CCFHDDSSGFSASADHTVRRLVFSHGKED-I 95 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~--~~V~~-~~~~~~~~~~s~s~D~~i~~w~~~~~~~~-~ 95 (342)
+.+.+..+..++..+++++.||+|+.||..+++.+...... ..+.+ ..+..++.+++++.|+.+..||..+++.. .
T Consensus 38 ~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~ 117 (369)
T 2hz6_A 38 DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT 117 (369)
T ss_dssp CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-------
T ss_pred CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 44555556667778888899999999999877643322111 11111 11124566778888999999999888743 2
Q ss_pred cccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC-----CeEEEEEcCCeEEE
Q 019384 96 LGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG-----NRLVVATAGRHVNV 170 (342)
Q Consensus 96 ~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~-----~~~~~~s~d~~v~i 170 (342)
+..+. ...++|+++.+++++.|+.|..||.+++........... ......+ +.+++++.++.+..
T Consensus 118 ~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~------~~~~~~~~~~~~~~v~~~~~dg~v~a 187 (369)
T 2hz6_A 118 LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY------AASLPEDDVDYKMSHFVSNGDGLVVT 187 (369)
T ss_dssp -------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE------CCBCCCCCTTCCCCEEEEETSCEEEE
T ss_pred ecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc------cCccccCCccccceEEEECCCCEEEE
Confidence 22222 234456788899999999999999876543211111111 1122222 56788899999999
Q ss_pred EeCCCCCC
Q 019384 171 YDLRNMSQ 178 (342)
Q Consensus 171 wd~~~~~~ 178 (342)
||.++++.
T Consensus 188 ~d~~tG~~ 195 (369)
T 2hz6_A 188 VDSESGDV 195 (369)
T ss_dssp ECTTTCCE
T ss_pred EECCCCcE
Confidence 99988754
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.24 E-value=6.4e-05 Score=63.73 Aligned_cols=183 Identities=9% Similarity=0.009 Sum_probs=108.2
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEE--EEEeCCCCeE-EEecCCcEEEEEeccCcee-
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLD--CCFHDDSSGF-SASADHTVRRLVFSHGKED- 94 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~--~~~~~~~~~~-s~s~D~~i~~w~~~~~~~~- 94 (342)
......|.|+ ++.+..+.+.+|.|+++|+.+++..... -...... +.+. +++++ ..-.++.+.++|..+.+..
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEE
Confidence 4556788888 4677788899999999999998766555 3344433 5554 34555 4456788999998887633
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCC-CcEEEEeccCCeEEEEE-cCCeEEEEe
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQP-ERVYSLSLVGNRLVVAT-AGRHVNVYD 172 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~-~~v~~~s~~~~~~~~~s-~d~~v~iwd 172 (342)
.+.- ...=+.++ ++++.|+.+..+++|.++|.++........+...... .....+.+....+..+. .+++|.+.|
T Consensus 131 ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 131 TTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEEC
T ss_pred EEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEe
Confidence 2221 11113343 4677777766788999999876433221122211111 12334444334454444 567899999
Q ss_pred CCCCCCcccccc-----------cccceeeEEEEEeeCCceEEEEc
Q 019384 173 LRNMSQPEQRRE-----------SSLKYQTRCVRCYPNGTGYALSS 207 (342)
Q Consensus 173 ~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~~s 207 (342)
.++++....... .......+.+++.|+++.+++..
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 988754211110 01113468899998766555444
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.20 E-value=0.00015 Score=63.50 Aligned_cols=57 Identities=12% Similarity=0.164 Sum_probs=38.0
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEecc
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYT 307 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~~ 307 (342)
++.+.++ ..|+.++.+|.|..+|. +++.+..+......+.++...++|++.+ ++..+
T Consensus 259 ~~~~~~~-g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G 315 (330)
T 3hxj_A 259 SPVIGNT-DTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYF-GTRNG 315 (330)
T ss_dssp CCEECTT-SCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTS
T ss_pred cceEcCC-CeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEE-EcCCC
Confidence 3444444 45778888889999996 5665555444445677888889998766 44433
No 251
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0024 Score=63.30 Aligned_cols=268 Identities=12% Similarity=0.117 Sum_probs=155.8
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee----------ecCCceEEEEEeCCCCeEEEecCCcEEEEE
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF----------MHGGPVLDCCFHDDSSGFSASADHTVRRLV 87 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~----------~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~ 87 (342)
..+.|+++..+++|. |..|..++-|..++.......... .....|.++....++.+..|+.++-+..++
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFE 389 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEE
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEE
Confidence 457899999999886 555777777888888765433221 123568888887778888888777788888
Q ss_pred eccCceeec----ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeee-cCCCCcEEEEeccC-CeEEE
Q 019384 88 FSHGKEDIL----GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGT-YPQPERVYSLSLVG-NRLVV 161 (342)
Q Consensus 88 ~~~~~~~~~----~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~-~~~~~~v~~~s~~~-~~~~~ 161 (342)
..++....+ ......|.++...+++. |..|+.++.|..+|.++..- ..+.. ......+.++..+. ..+.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 390 NGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKF---QIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp TTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEE---EECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred CCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcE---EEeccCCCCCCeEEEEEECCCCCEEE
Confidence 765443222 12346789998877665 55577777899998754211 11110 01224566676654 46777
Q ss_pred EEcCCeEEEEeCCCCCCccccccc---ccceeeEEEEEeeCCceEEEEcc-CCeEEEEEeechhhhhcccceeeeEEecC
Q 019384 162 ATAGRHVNVYDLRNMSQPEQRRES---SLKYQTRCVRCYPNGTGYALSSV-EGRVAMEFFDLSEASQAKKYAFKCHRKSE 237 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~s~-~~~~~i~~~d~~~~~~~~~~~~~~h~~~~ 237 (342)
++. +.+..||..+.......... .....+.++...++|. +.+++. ++ +..+|..... ...+. ..
T Consensus 466 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~G---l~~~~~~~~~-~~~~~------~~ 533 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGG---VGIYTPDMQL-VRKFN------QY 533 (781)
T ss_dssp EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSC---EEEECTTCCE-EEEEC------TT
T ss_pred EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-EEEEEcCCC---EEEEeCCCCe-EEEcc------CC
Confidence 777 56888998764321111000 0123456776666666 444554 44 2346653211 11110 00
Q ss_pred CCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeee--ccCCC-CcceEEEEECCCCCEEEEEE
Q 019384 238 AGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLY--QYSKY-PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 238 ~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~--~~~~~-~~~V~~v~~spdg~~las~s 304 (342)
.+. ....|.++...++|...++ +.+|-|..||.++++... ...+- ...|.++...++|++.+++.
T Consensus 534 ~~l-~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 534 EGF-CSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN 601 (781)
T ss_dssp TTC-SCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS
T ss_pred CCC-CCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC
Confidence 010 1124788888888775444 446665889987654321 11222 23688999999998766543
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.18 E-value=0.00042 Score=68.47 Aligned_cols=195 Identities=11% Similarity=0.036 Sum_probs=105.1
Q ss_pred CeEEEEEc-CCCCeEEEE-eCC----CcEEEEECCCc-eeeeeeecCCceEEEEEeCCCC-eEEEecCC-----cEEEEE
Q 019384 21 GISNLRFS-NHSDHLLVS-SWD----KSVRLYDASAN-VLRGEFMHGGPVLDCCFHDDSS-GFSASADH-----TVRRLV 87 (342)
Q Consensus 21 ~V~~l~fs-~~~~~l~s~-s~D----gti~vwd~~~~-~~~~~~~h~~~V~~~~~~~~~~-~~s~s~D~-----~i~~w~ 87 (342)
.+.+.+|| |||++||-+ +.+ .+|+++|+.++ +...... ......+.|+++++ ++....|. .|.+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 67889999 999988733 323 35999999887 5322100 11234678987765 44445442 466666
Q ss_pred eccCc---eeecc-cCCcceeEEEEeCCCCEEEEeeC---CCcEEEEcCCCCCCcc--eeeeeecCCCCcEEEEe-ccCC
Q 019384 88 FSHGK---EDILG-KHDAPVRCIEYSYAAGQVITGSW---DKSLKCWDPRGASGQE--RTLVGTYPQPERVYSLS-LVGN 157 (342)
Q Consensus 88 ~~~~~---~~~~~-~h~~~V~~~~~~~~~~~l~sgs~---D~~I~iWd~~~~~~~~--~~~~~~~~~~~~v~~~s-~~~~ 157 (342)
+.++. ..++. .+......+.|+||++.|+..+. ...|.++|+.++.... ....... .....+.. ..++
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~--~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE--KGVRYDVQMHGTS 331 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC--TTCCEEEEEETTT
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC--CCceEEEeeeeCC
Confidence 66653 12222 23345668899999998765443 2367888886542222 1221111 12223344 2366
Q ss_pred eEEEEEcCC-----eEEEEeCCCCCCccc-ccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeec
Q 019384 158 RLVVATAGR-----HVNVYDLRNMSQPEQ-RRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDL 219 (342)
Q Consensus 158 ~~~~~s~d~-----~v~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~ 219 (342)
.|+..+..+ .|..+|+.+...... .........+..+.+. .+..+++...++...+++++.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 666555432 566677654211111 1111111223334333 233445556778878888885
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.17 E-value=0.00038 Score=58.35 Aligned_cols=184 Identities=9% Similarity=-0.031 Sum_probs=107.8
Q ss_pred CCCeEEEEEcCCCCeEEEEeCC--CcEEEEECCCceeeeeeecCCceE--EEEEeCCCCeE-EEecCCcEEEEEeccCce
Q 019384 19 SDGISNLRFSNHSDHLLVSSWD--KSVRLYDASANVLRGEFMHGGPVL--DCCFHDDSSGF-SASADHTVRRLVFSHGKE 93 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~D--gti~vwd~~~~~~~~~~~h~~~V~--~~~~~~~~~~~-s~s~D~~i~~w~~~~~~~ 93 (342)
......|.|+. +.+..|.+.+ ..|+++|+.+++......-..... ++.+. +++++ ..-.++.+.++|..+.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcE
Confidence 45677899996 5666777775 499999999998766654444443 34443 34554 445678899999887763
Q ss_pred e-ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCC-CcEEEEeccCCeEEEEE-cCCeEEE
Q 019384 94 D-ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQP-ERVYSLSLVGNRLVVAT-AGRHVNV 170 (342)
Q Consensus 94 ~-~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~-~~v~~~s~~~~~~~~~s-~d~~v~i 170 (342)
. .+.- ...=+.++ ++++.|+.+..+++|.++|.++........+.....+ ..+..+.+.+..+.... .+..|.+
T Consensus 98 ~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 98 RARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIAR 174 (243)
T ss_dssp EEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEE
T ss_pred EEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEE
Confidence 2 2221 11113443 4676666666688999999876432222222211111 12334555444455444 5678999
Q ss_pred EeCCCCCCccccccc-----------ccceeeEEEEEeeCCceEEEEc
Q 019384 171 YDLRNMSQPEQRRES-----------SLKYQTRCVRCYPNGTGYALSS 207 (342)
Q Consensus 171 wd~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~~s 207 (342)
.|.++++........ ......+.+++.|+++.+.+.+
T Consensus 175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 999887542111100 1123468899999877665554
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.15 E-value=0.00023 Score=60.30 Aligned_cols=192 Identities=11% Similarity=0.077 Sum_probs=109.5
Q ss_pred eeeeeecCCc--eEEEEEeCCCCe-EEEecCCcEEEEEeccCcee-ecccCCccee--EEEEeCCCCEE-EEeeCCCcEE
Q 019384 53 LRGEFMHGGP--VLDCCFHDDSSG-FSASADHTVRRLVFSHGKED-ILGKHDAPVR--CIEYSYAAGQV-ITGSWDKSLK 125 (342)
Q Consensus 53 ~~~~~~h~~~--V~~~~~~~~~~~-~s~s~D~~i~~w~~~~~~~~-~~~~h~~~V~--~~~~~~~~~~l-~sgs~D~~I~ 125 (342)
+..++-|... ...+.|.. +.+ ++.+.++.|+.+|+++++.. .+ -..... .+++ +++.| ...-.++.+.
T Consensus 45 Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~--~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLAS--DGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEE--CSSCEEEEESSSCEEE
T ss_pred EEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEE--eCCEEEEEEccCCEEE
Confidence 4455556544 36788875 455 47788888999999988732 22 112222 2444 44444 4445678899
Q ss_pred EEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEE
Q 019384 126 CWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYAL 205 (342)
Q Consensus 126 iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 205 (342)
++|.++... +........-..++.+++.++.+..+++|.++|..+.+.. ..+. +
T Consensus 120 V~D~~Tl~~-----~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~------------~~I~---------V 173 (268)
T 3nok_A 120 TWSGMPPQR-----ERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALV------------GAVQ---------V 173 (268)
T ss_dssp EEETTTTEE-----EEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEE------------EEEE---------C
T ss_pred EEECCcCcE-----EEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEE------------EEEE---------e
Confidence 999875432 1221112222456677777777766788999988765211 0000 0
Q ss_pred EccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccCC--
Q 019384 206 SSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSK-- 283 (342)
Q Consensus 206 ~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~~-- 283 (342)
.. ++. . ...++.+.|. +|..++....+..|.+.|.++++.+..+.-
T Consensus 174 ~~-~g~-------------~-----------------v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 174 KL-RGQ-------------P-----------------VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp EE-TTE-------------E-----------------CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred CC-CCc-------------c-----------------cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 00 000 0 0013445554 566556666677999999998876654321
Q ss_pred ---------C--CcceEEEEECCCCC-EEEEEEecc
Q 019384 284 ---------Y--PTSIAALSFSRDGR-LLAVASSYT 307 (342)
Q Consensus 284 ---------~--~~~V~~v~~spdg~-~las~s~~~ 307 (342)
+ ....+.|||+|+++ ++++|-.|.
T Consensus 222 L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 222 LTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp HHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred CcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 1 13569999999866 555543343
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.10 E-value=2.8e-05 Score=68.18 Aligned_cols=245 Identities=10% Similarity=0.058 Sum_probs=127.5
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee-cCCceEEEEEeCCCCeEEEecCCcEEEEEeccCcee-ecccCCc
Q 019384 24 NLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM-HGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKED-ILGKHDA 101 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~-~~~~h~~ 101 (342)
+...+.++ .|..++.++.|..|| .+++...... ....+.++...+++.++.++.+ +..++. +++.. .+.....
T Consensus 24 ~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~ 98 (330)
T 3hxj_A 24 SPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKA 98 (330)
T ss_dssp CCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC---
T ss_pred CceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCC
Confidence 45555555 455677899999999 7766544332 2233455555566666666555 767764 33321 1222222
Q ss_pred ceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc-CCeEEEEEcCCeEEEEeCCCCCCcc
Q 019384 102 PVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV-GNRLVVATAGRHVNVYDLRNMSQPE 180 (342)
Q Consensus 102 ~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~-~~~~~~~s~d~~v~iwd~~~~~~~~ 180 (342)
......+. +..|..++.++.|..+|.+ +.. ........ ..+.++..+ .+.+.+++.++.+..+|.. +....
T Consensus 99 ~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~--~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 99 IVSDFTIF--EDILYVTSMDGHLYAINTD-GTE--KWRFKTKK--AIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp --CCEEEE--TTEEEEECTTSEEEEECTT-SCE--EEEEECSS--CCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEE
T ss_pred cccCceEE--CCEEEEEecCCEEEEEcCC-CCE--EEEEcCCC--ceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeE
Confidence 22333333 5578888889999999976 322 11111111 111122223 3457778888999999987 43221
Q ss_pred cccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEE
Q 019384 181 QRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFAT 260 (342)
Q Consensus 181 ~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~s 260 (342)
... .. ...+.++...+++. +.+++ +. +..+| .... ..+..... ...+.+++..++|. |..
T Consensus 171 ~~~-~~-~~~~~~~~~d~~g~-l~v~t--~~--l~~~d-~~g~--~~~~~~~~---------~~~~~~~~~~~~g~-l~v 230 (330)
T 3hxj_A 171 RFK-TN-DAITSAASIGKDGT-IYFGS--DK--VYAIN-PDGT--EKWNFYAG---------YWTVTRPAISEDGT-IYV 230 (330)
T ss_dssp EEE-CS-SCCCSCCEECTTCC-EEEES--SS--EEEEC-TTSC--EEEEECCS---------SCCCSCCEECTTSC-EEE
T ss_pred EEe-cC-CCceeeeEEcCCCE-EEEEe--CE--EEEEC-CCCc--EEEEEccC---------CcceeceEECCCCe-EEE
Confidence 111 11 11122333445555 45555 33 34566 2221 11211110 01366778887764 556
Q ss_pred ecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEE
Q 019384 261 GGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAV 302 (342)
Q Consensus 261 gs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las 302 (342)
++.++.|..+|. +++.+..+......+.++.+.++|++.+.
T Consensus 231 ~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~ 271 (330)
T 3hxj_A 231 TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFG 271 (330)
T ss_dssp EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEE
T ss_pred EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEe
Confidence 667888888885 34444444433333455666777775543
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.06 E-value=0.002 Score=53.99 Aligned_cols=118 Identities=10% Similarity=0.091 Sum_probs=68.3
Q ss_pred eeeeeecCCc--eEEEEEeCCCCeE-EEecC--CcEEEEEeccCceeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEE
Q 019384 53 LRGEFMHGGP--VLDCCFHDDSSGF-SASAD--HTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKC 126 (342)
Q Consensus 53 ~~~~~~h~~~--V~~~~~~~~~~~~-s~s~D--~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~i 126 (342)
+..++-|... ...+.|.+ +.++ +.+.+ ..|+.+|+.+++...-..-............++.|+ ..-.++.+.+
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 4555567644 56888876 4554 65654 379999999987432111111222222222345554 4456788999
Q ss_pred EcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCC
Q 019384 127 WDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNM 176 (342)
Q Consensus 127 Wd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~ 176 (342)
+|.++... +........-..++.+++.++.+..+++|.++|..+.
T Consensus 90 ~D~~tl~~-----~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~ 134 (243)
T 3mbr_X 90 YDLATLTP-----RARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTL 134 (243)
T ss_dssp EETTTTEE-----EEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTC
T ss_pred EECCcCcE-----EEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCC
Confidence 99875432 2222112223456677777776666778998988765
No 257
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.04 E-value=0.00047 Score=62.98 Aligned_cols=184 Identities=11% Similarity=0.057 Sum_probs=107.7
Q ss_pred EEEEEcCCCCeEEEEeCC------CcEEEEECCCceeeeeeecC-C---ceEEEEEeCCCCeEEEec-------------
Q 019384 23 SNLRFSNHSDHLLVSSWD------KSVRLYDASANVLRGEFMHG-G---PVLDCCFHDDSSGFSASA------------- 79 (342)
Q Consensus 23 ~~l~fs~~~~~l~s~s~D------gti~vwd~~~~~~~~~~~h~-~---~V~~~~~~~~~~~~s~s~------------- 79 (342)
..+..+|+| .++++..+ |.|.+.|..+.+++...... + --+.+.|+++...+..+.
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 346778999 77777666 78999999988777665322 1 234577788776654442
Q ss_pred -------CCcEEEEEeccCcee-ecc-c-CCcceeEEEE--eCCCCEEEEee------CCCcEEEEcCCCCCCcceeee-
Q 019384 80 -------DHTVRRLVFSHGKED-ILG-K-HDAPVRCIEY--SYAAGQVITGS------WDKSLKCWDPRGASGQERTLV- 140 (342)
Q Consensus 80 -------D~~i~~w~~~~~~~~-~~~-~-h~~~V~~~~~--~~~~~~l~sgs------~D~~I~iWd~~~~~~~~~~~~- 140 (342)
+.+|.+||+.+++.. .+. + .......+.| +|++++++.+. .+++|.+|..+.+.-.....+
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 688999999876532 221 1 2233445655 99998876554 567887765432110000100
Q ss_pred -ee--c--------------CCCCcEEEEeccCCeEEEEEc-CCeEEEEeCCCCCCcccccccccc--------------
Q 019384 141 -GT--Y--------------PQPERVYSLSLVGNRLVVATA-GRHVNVYDLRNMSQPEQRRESSLK-------------- 188 (342)
Q Consensus 141 -~~--~--------------~~~~~v~~~s~~~~~~~~~s~-d~~v~iwd~~~~~~~~~~~~~~~~-------------- 188 (342)
.. . .....-+.++.+++.+.++.. .+.|.+||+.....+.......+.
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~ 379 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKL 379 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccC
Confidence 00 0 011223457778877665544 478999998643222111111111
Q ss_pred -eeeEEEEEeeCCceEEEEc
Q 019384 189 -YQTRCVRCYPNGTGYALSS 207 (342)
Q Consensus 189 -~~~~~v~~~~~~~~~~~~s 207 (342)
.....+.++|+|+.++++.
T Consensus 380 ~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 380 TGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEcCCCCEEEEEc
Confidence 1246677888888877765
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=0.015 Score=57.56 Aligned_cols=271 Identities=10% Similarity=-0.017 Sum_probs=152.4
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee---------------ecCCceEEEEEeCCCCeEEEecCCc
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF---------------MHGGPVLDCCFHDDSSGFSASADHT 82 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~---------------~h~~~V~~~~~~~~~~~~s~s~D~~ 82 (342)
....|+++..+++|.+.+ |...+-|.++|..++...... .....|.++....++.+-.|+.++-
T Consensus 256 ~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~G 334 (781)
T 3v9f_A 256 LSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGG 334 (781)
T ss_dssp CCCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSC
T ss_pred cCceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCe
Confidence 356799999998886554 555455788888765432211 1245688888877777878887888
Q ss_pred EEEEEeccCceeecc----------cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeee-ecCCCCcEEE
Q 019384 83 VRRLVFSHGKEDILG----------KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVG-TYPQPERVYS 151 (342)
Q Consensus 83 i~~w~~~~~~~~~~~----------~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~-~~~~~~~v~~ 151 (342)
+..++........+. .....|.++...+++. |..|+.++.|.+||..+... ..... .......+.+
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVA--IYNKENRELLSNSVLC 411 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEE--ECC-----CCCSBEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeE--EEccCCCCCCCcceEE
Confidence 888876654422221 1235689998877664 55677777899999753211 00000 0012245667
Q ss_pred Eecc-CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee
Q 019384 152 LSLV-GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF 230 (342)
Q Consensus 152 ~s~~-~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 230 (342)
+..+ .+.+.+++.++.+..+|..+...............+.++...+++. +.+++..+ +..+|...... ..+
T Consensus 412 i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~~G---l~~~~~~~~~~-~~~-- 484 (781)
T 3v9f_A 412 SLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTHAG---VFVIDLASKKV-IHH-- 484 (781)
T ss_dssp EEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEETTE---EEEEESSSSSC-CEE--
T ss_pred EEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEECCc---eEEEeCCCCeE-Eec--
Confidence 7665 3467778887778889876542211100000112455665555554 55555433 34576543211 111
Q ss_pred eeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeecc--CC-CCcceEEEEECCCCCEEEEE
Q 019384 231 KCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQY--SK-YPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 231 ~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~--~~-~~~~V~~v~~spdg~~las~ 303 (342)
............|.++...++|. |..|+.++-+..||.++++...-. .+ ....|.++...++|.+.+++
T Consensus 485 ---~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 485 ---YDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp ---ECTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred ---ccCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 00000000112578888888776 444555445888988765432211 11 23578999999999966644
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.0032 Score=61.24 Aligned_cols=101 Identities=14% Similarity=0.036 Sum_probs=60.0
Q ss_pred CCeEEEEeCCCcEEEEECCCceeeeeeecCCc-----------e-EEEEEeCCCCeEEEecCCcEEEEEeccCcee---e
Q 019384 31 SDHLLVSSWDKSVRLYDASANVLRGEFMHGGP-----------V-LDCCFHDDSSGFSASADHTVRRLVFSHGKED---I 95 (342)
Q Consensus 31 ~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~-----------V-~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~---~ 95 (342)
+..|..++.++.|.-+|..+++.+..+..... + ..+.+ .++.++.++.|+.+..+|..+++.. .
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 45677788899999999998876654432211 1 11222 3556788888999999998888743 1
Q ss_pred cccC--CcceeEEEEeCCCCEEEEeeC------CCcEEEEcCCCCC
Q 019384 96 LGKH--DAPVRCIEYSYAAGQVITGSW------DKSLKCWDPRGAS 133 (342)
Q Consensus 96 ~~~h--~~~V~~~~~~~~~~~l~sgs~------D~~I~iWd~~~~~ 133 (342)
.... ...+.+--.. .+..++.+.. ++.|..+|.+++.
T Consensus 145 ~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~ 189 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGK 189 (668)
T ss_dssp CSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred cCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCc
Confidence 1111 0111110001 1345555443 5899999987654
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.61 E-value=0.036 Score=49.90 Aligned_cols=239 Identities=11% Similarity=0.007 Sum_probs=126.6
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeE-EEecCCcEEEEEeccCceeec-cc
Q 019384 22 ISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGF-SASADHTVRRLVFSHGKEDIL-GK 98 (342)
Q Consensus 22 V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~-s~s~D~~i~~w~~~~~~~~~~-~~ 98 (342)
-.+.+..+++ .|+ -+....|+..++.+............+.+++|.+ ++.++ +-...+.|..++........+ ..
T Consensus 79 ~~C~~~~~~~-~l~-~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 79 RSCKALGPEP-VLL-FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp SCEEECSSCC-EEE-EECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred CeECCccccc-eeE-eecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 3444444433 333 3345678888887665444433445678999984 55555 444567788888776653332 22
Q ss_pred CCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecC-CCCcEEEEeccCCeEEEE-EcC-CeEEEEeCC
Q 019384 99 HDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYP-QPERVYSLSLVGNRLVVA-TAG-RHVNVYDLR 174 (342)
Q Consensus 99 h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~~~~~-s~d-~~v~iwd~~ 174 (342)
.......+++.+.++.| ++-...+.|.+.+++.... ..+.... ....-+.+++.+..+..+ ... +.|..+++.
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 22345678888866555 5556667899888763221 1121111 111223344434444433 333 568888876
Q ss_pred CCCCcccccccccceeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcC
Q 019384 175 NMSQPEQRRESSLKYQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHP 253 (342)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp 253 (342)
..... ......+ ...+.+++.|++..+..+ +..+. |+.+|.... . +...+.. +.. ....+++ .
T Consensus 234 G~~~~-~~~~~~~-~~PnGlavd~~~~~lY~aD~~~~~--I~~~d~dG~-~-~~~~~~~------~~~---~P~giav-~ 297 (386)
T 3v65_B 234 GSGRR-IIADTHL-FWPNGLTIDYAGRRMYWVDAKHHV--IERANLDGS-H-RKAVISQ------GLP---HPFAITV-F 297 (386)
T ss_dssp SCSCE-EEECSSC-SCEEEEEEEGGGTEEEEEETTTTE--EEEECTTSC-S-CEEEECS------SCS---SEEEEEE-E
T ss_pred CCCcE-EEEECCC-CCeeeEEEeCCCCEEEEEECCCCE--EEEEeCCCC-e-eEEEEEC------CCC---CceEEEE-E
Confidence 43211 1111111 236788899766655555 44443 455776321 1 1111110 001 1345666 3
Q ss_pred CCCeEEEecCCCeEEEEeCCCceeeecc
Q 019384 254 IYGTFATGGCDGFVNVWDGNNKKRLYQY 281 (342)
Q Consensus 254 ~~~~l~sgs~Dg~I~iWd~~~~~~~~~~ 281 (342)
.+..+++-...+.|..++..+++.+..+
T Consensus 298 ~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 4566777778889999986555544433
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.61 E-value=0.013 Score=51.10 Aligned_cols=111 Identities=7% Similarity=-0.033 Sum_probs=68.5
Q ss_pred CCeEEEEEcC-CCCeEEEEeCCCcEEEEECCCceeeeeee-----cCCceEEEEEeC-CCCeEEEecC------------
Q 019384 20 DGISNLRFSN-HSDHLLVSSWDKSVRLYDASANVLRGEFM-----HGGPVLDCCFHD-DSSGFSASAD------------ 80 (342)
Q Consensus 20 ~~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~~~~~~~-----h~~~V~~~~~~~-~~~~~s~s~D------------ 80 (342)
..+..+++++ +++ |..+...+.+.++|..++.+..... .......+++.+ ++.++.+...
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 3578899998 554 4445455558888887654322211 112467788887 7777654432
Q ss_pred ------CcEEEEEeccCceeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEEEcCCC
Q 019384 81 ------HTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKCWDPRG 131 (342)
Q Consensus 81 ------~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~ 131 (342)
+.+..++..++....+.........++++++++.|+ +-+..+.|.++|+..
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 456666665554332222223456789999988654 446668999999864
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.61 E-value=0.013 Score=55.76 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=59.7
Q ss_pred CCeEEEEeC-CCcEEEEEC-CCceeeeeeecCCc-----------e-EEEEEeCCCCeEEEecCCcEEEEEeccCcee--
Q 019384 31 SDHLLVSSW-DKSVRLYDA-SANVLRGEFMHGGP-----------V-LDCCFHDDSSGFSASADHTVRRLVFSHGKED-- 94 (342)
Q Consensus 31 ~~~l~s~s~-Dgti~vwd~-~~~~~~~~~~h~~~-----------V-~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~-- 94 (342)
+..+..++. ++.|.-+|. .+++.+-.+..... + ....+ .++.++.++.|+.+..+|..+++..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY-GAGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE-ECCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 345666666 899999999 88876654432211 1 11222 3567788888999999998888743
Q ss_pred -ecccCC--cceeE-EEEeCCCCEEEEeeC------CCcEEEEcCCCCC
Q 019384 95 -ILGKHD--APVRC-IEYSYAAGQVITGSW------DKSLKCWDPRGAS 133 (342)
Q Consensus 95 -~~~~h~--~~V~~-~~~~~~~~~l~sgs~------D~~I~iWd~~~~~ 133 (342)
.+..+. ..+.+ -... + ..++.++. ++.|..+|.++++
T Consensus 141 ~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 141 VEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp EECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred ecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCc
Confidence 122211 11221 1111 3 45555544 7899999987654
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.58 E-value=0.012 Score=57.90 Aligned_cols=112 Identities=12% Similarity=0.050 Sum_probs=65.3
Q ss_pred ceEEEEEe-CCCCeEE--EecCC----cEEEEEeccC-ceeecccC-CcceeEEEEeCCCCEEEEeeCC-----CcEEEE
Q 019384 62 PVLDCCFH-DDSSGFS--ASADH----TVRRLVFSHG-KEDILGKH-DAPVRCIEYSYAAGQVITGSWD-----KSLKCW 127 (342)
Q Consensus 62 ~V~~~~~~-~~~~~~s--~s~D~----~i~~w~~~~~-~~~~~~~h-~~~V~~~~~~~~~~~l~sgs~D-----~~I~iW 127 (342)
.+....|+ |+++.+. ...+| .|+++++.++ +. +..+ .....+++|+||++.|+-.+.| ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 56778999 9987543 33332 4888898887 52 1111 1123468899999888766665 257778
Q ss_pred cCCCCCCcceeeeeecCCCCcE--EEEeccCCeEEEEEcC---CeEEEEeCCCC
Q 019384 128 DPRGASGQERTLVGTYPQPERV--YSLSLVGNRLVVATAG---RHVNVYDLRNM 176 (342)
Q Consensus 128 d~~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~~~~~s~d---~~v~iwd~~~~ 176 (342)
++.++.......... ...... ..++.+++.|+..+.+ ..|.++|+.+.
T Consensus 253 ~lgt~~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp ETTSCGGGCEEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ECCCCchhcEEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 876532211122211 111112 3466677777665533 35888898764
No 264
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.52 E-value=0.032 Score=47.04 Aligned_cols=153 Identities=9% Similarity=0.034 Sum_probs=90.8
Q ss_pred CCeEEEEEcCCCCeE-EEEeCCCcEEEEECCCceeeeeeec-CCceEEEEEeCC-CCeEEE-ecCCcEEEEEeccCceee
Q 019384 20 DGISNLRFSNHSDHL-LVSSWDKSVRLYDASANVLRGEFMH-GGPVLDCCFHDD-SSGFSA-SADHTVRRLVFSHGKEDI 95 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l-~s~s~Dgti~vwd~~~~~~~~~~~h-~~~V~~~~~~~~-~~~~s~-s~D~~i~~w~~~~~~~~~ 95 (342)
..+..++|+++++.| ++-...+.|.+++..+......... .....++++.++ +.++.+ ...+.|.+++.+......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 456789999976555 4555678999999976544333222 246788999864 556544 456678888876544332
Q ss_pred cc-cCCcceeEEEEeCCCCEEEEeeC---CCcEEEEcCCCCCCcceeeeeecCC-CCcEEEEeccCCeEEEE-EcCCeEE
Q 019384 96 LG-KHDAPVRCIEYSYAAGQVITGSW---DKSLKCWDPRGASGQERTLVGTYPQ-PERVYSLSLVGNRLVVA-TAGRHVN 169 (342)
Q Consensus 96 ~~-~h~~~V~~~~~~~~~~~l~sgs~---D~~I~iWd~~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~~~~~-s~d~~v~ 169 (342)
+. ........++++|+++.|+.+.. .+.|..+++..... ..+..... ...-++++.+++.+..+ ...+.|.
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~---~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR---RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC---EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc---EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 22 22245688999997666654443 36888888753211 12211111 11223444445555544 4457899
Q ss_pred EEeCCC
Q 019384 170 VYDLRN 175 (342)
Q Consensus 170 iwd~~~ 175 (342)
.+|+..
T Consensus 193 ~~~~~g 198 (267)
T 1npe_A 193 CLNPAQ 198 (267)
T ss_dssp EEETTE
T ss_pred EEecCC
Confidence 999864
No 265
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.49 E-value=0.0039 Score=58.93 Aligned_cols=232 Identities=15% Similarity=0.149 Sum_probs=126.3
Q ss_pred CCCeEEEEE-c-CCCCeEEEEe------------------CCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCe-EEE
Q 019384 19 SDGISNLRF-S-NHSDHLLVSS------------------WDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSG-FSA 77 (342)
Q Consensus 19 ~~~V~~l~f-s-~~~~~l~s~s------------------~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~-~s~ 77 (342)
..++..++| + |++.++..++ +++++.+.|..+.+...++.-.+....+.+++++.. +++
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt 212 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFST 212 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEE
Confidence 356888998 4 8999988774 457899999998776666544445566777766665 455
Q ss_pred ecCCc---------------EEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcc-eeeee
Q 019384 78 SADHT---------------VRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQE-RTLVG 141 (342)
Q Consensus 78 s~D~~---------------i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~-~~~~~ 141 (342)
+.+.. +.+.++.... ++.++|+...- +.|.+.|.++..... ...+.
T Consensus 213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~--------------~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ip 274 (595)
T 1fwx_A 213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIE--------------KAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIP 274 (595)
T ss_dssp ESCTTCCSSHHHHTCCSEEEEEEEEHHHHH--------------HHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEE
T ss_pred ecCcccCcchhhccccccceEEEeecccee--------------EeccCCCeeEE----CcEEEEeCcccCCceeEEEEe
Confidence 54431 2222211110 11234443332 569999987521111 11121
Q ss_pred ecCCCCcEEEEeccCCeEEEE-EcCCeEEEEeCCCCCCc-------c--cccccccceeeEEEEEeeCCceEEEEccCCe
Q 019384 142 TYPQPERVYSLSLVGNRLVVA-TAGRHVNVYDLRNMSQP-------E--QRRESSLKYQTRCVRCYPNGTGYALSSVEGR 211 (342)
Q Consensus 142 ~~~~~~~v~~~s~~~~~~~~~-s~d~~v~iwd~~~~~~~-------~--~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~ 211 (342)
.-..+. -+.+++++++++++ ..+.+|.++|+.+.+.. . ............-++|+++|..+++...+++
T Consensus 275 vg~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 275 IANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp EESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTE
T ss_pred cCCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCc
Confidence 112222 34688888866554 45578999999853100 0 0111222334567889999954455667777
Q ss_pred EEEEEeechhhhh--------cccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEe---cCCCeE----------EEE
Q 019384 212 VAMEFFDLSEASQ--------AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATG---GCDGFV----------NVW 270 (342)
Q Consensus 212 ~~i~~~d~~~~~~--------~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sg---s~Dg~I----------~iW 270 (342)
+.+ ||+..... .....+..|.+ -.|.+.-..+.++|||++|++. +.|+-+ .++
T Consensus 354 V~k--wdi~~a~~~~~g~~~~~vi~kidV~yq----pGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~ 427 (595)
T 1fwx_A 354 VVK--WNIEDAIRAYAGEKVDPIKDKLDVHYQ----PGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLI 427 (595)
T ss_dssp EEE--EEHHHHHHHHHTCSCCCEEEEEECSSC----EEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEE
T ss_pred EEE--EEhhHhhhhhcccccceeEEEeecccc----cccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEE
Confidence 654 88754211 00111111100 0111112334678999998775 345532 778
Q ss_pred eCCCc
Q 019384 271 DGNNK 275 (342)
Q Consensus 271 d~~~~ 275 (342)
|+..+
T Consensus 428 dis~~ 432 (595)
T 1fwx_A 428 DISGD 432 (595)
T ss_dssp ECSSS
T ss_pred EcCCC
Confidence 87643
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.45 E-value=0.066 Score=48.96 Aligned_cols=152 Identities=11% Similarity=-0.009 Sum_probs=82.4
Q ss_pred eEEEEEeC--CCCeEEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeC-CC----cEEEEcCCCCCCc
Q 019384 63 VLDCCFHD--DSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSW-DK----SLKCWDPRGASGQ 135 (342)
Q Consensus 63 V~~~~~~~--~~~~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~-D~----~I~iWd~~~~~~~ 135 (342)
...+++.+ ++.++.+...+.|+.++...+....+.........++|+++++.|+.+.. ++ .+...+... ...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFK 217 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-cee
Confidence 45777874 45666655557788888877665444444556789999999985554443 22 233344321 111
Q ss_pred ceeeeeecCCCCcEEEEec-cCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEE-ccCCeEE
Q 019384 136 ERTLVGTYPQPERVYSLSL-VGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALS-SVEGRVA 213 (342)
Q Consensus 136 ~~~~~~~~~~~~~v~~~s~-~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-s~~~~~~ 213 (342)
....+....++.. +.++. .+..+++-...+.|..+|....... .............++++|+++.+++. .....+.
T Consensus 218 ~~~~l~~~~~p~g-iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 218 VITELTKGQNCNG-AETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp SEEEEEECSSCCC-EEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeccCCCceE-EEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1112222333332 34555 3444444456678999998754221 11111111235678999999955544 4555544
Q ss_pred EEEeec
Q 019384 214 MEFFDL 219 (342)
Q Consensus 214 i~~~d~ 219 (342)
.++.
T Consensus 296 --~~~~ 299 (430)
T 3tc9_A 296 --RSDY 299 (430)
T ss_dssp --EEEE
T ss_pred --EEeC
Confidence 4554
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.42 E-value=0.051 Score=52.56 Aligned_cols=262 Identities=12% Similarity=0.033 Sum_probs=122.5
Q ss_pred EEEEeC-CCCeE-EEecCC-----------cEEEEEeccCceeec----ccCCcceeEEEEeCCCCEEEEeeC-CCcEEE
Q 019384 65 DCCFHD-DSSGF-SASADH-----------TVRRLVFSHGKEDIL----GKHDAPVRCIEYSYAAGQVITGSW-DKSLKC 126 (342)
Q Consensus 65 ~~~~~~-~~~~~-s~s~D~-----------~i~~w~~~~~~~~~~----~~h~~~V~~~~~~~~~~~l~sgs~-D~~I~i 126 (342)
.+++.+ +++++ .|+.+. .+.+||..+.....+ ..+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455554 66654 555432 467788777663322 122223335677788888888885 458999
Q ss_pred EcCCCCCCcceeeeeecCCC-CcEEEEec-cCCeEEEEE-cC-----CeEEEEeCCCCCCccccc--ccccceeeEEEEE
Q 019384 127 WDPRGASGQERTLVGTYPQP-ERVYSLSL-VGNRLVVAT-AG-----RHVNVYDLRNMSQPEQRR--ESSLKYQTRCVRC 196 (342)
Q Consensus 127 Wd~~~~~~~~~~~~~~~~~~-~~v~~~s~-~~~~~~~~s-~d-----~~v~iwd~~~~~~~~~~~--~~~~~~~~~~v~~ 196 (342)
||+.+..= ..+...... ........ ++..++.++ .+ .++.+||..+..-..... ..++...-....+
T Consensus 270 yd~~t~~W---~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 270 YDSSSDSW---IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEGGGTEE---EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred ecCcCCce---eECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 99864310 111111111 11122333 566666666 33 468999987642110000 0000000000011
Q ss_pred eeCCceEEEEccCCeE-------EEEEeechhhhhcccceeeeEEecCCC-CceeeeeeEEEEcC-CCCeEEEecCCC--
Q 019384 197 YPNGTGYALSSVEGRV-------AMEFFDLSEASQAKKYAFKCHRKSEAG-RDIVYPVNAIAFHP-IYGTFATGGCDG-- 265 (342)
Q Consensus 197 ~~~~~~~~~~s~~~~~-------~i~~~d~~~~~~~~~~~~~~h~~~~~~-~~~~~~v~~v~~sp-~~~~l~sgs~Dg-- 265 (342)
..++..++.+..++.+ .+..||........ ....+... .+ ......-.++.|.. ++++++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~--~~~~~~~~-~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK--SAGKRQSN-RGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE--EEEECEET-TEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceee--cCCccccc-cccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 1233444455444322 34567764332110 11111100 00 00000123444543 677888888543
Q ss_pred ---------eEEEEeCCCceeeecc--CCCCcce-EEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCCcccc
Q 019384 266 ---------FVNVWDGNNKKRLYQY--SKYPTSI-AALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEIEVKP 332 (342)
Q Consensus 266 ---------~I~iWd~~~~~~~~~~--~~~~~~V-~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (342)
.|.+||..+..-.... .....+. .+++..|||++++.|+......-........+.+|+.+...|..
T Consensus 424 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~ 502 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK 502 (656)
T ss_dssp SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE
T ss_pred CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee
Confidence 6888988765422211 1222333 45677799999999875431100011123457777766555543
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.41 E-value=0.038 Score=46.63 Aligned_cols=200 Identities=7% Similarity=0.035 Sum_probs=109.3
Q ss_pred cccCCcceeEEEEeCCCCEEEE-eeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC-CeEEEEE-cCCeEEEEe
Q 019384 96 LGKHDAPVRCIEYSYAAGQVIT-GSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG-NRLVVAT-AGRHVNVYD 172 (342)
Q Consensus 96 ~~~h~~~V~~~~~~~~~~~l~s-gs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~-~~~~~~s-~d~~v~iwd 172 (342)
+.+-...+..++++|+++.|++ ...++.|...|+. +.......+.. ....-.+.+.+ +.++.+. .++.+.+++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g---~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF---VKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS---CSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC---CCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 3444457899999998776654 5667788888875 32211111111 12233344433 3444443 345677777
Q ss_pred CCCCCCcc--cccc-----cccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeee
Q 019384 173 LRNMSQPE--QRRE-----SSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYP 245 (342)
Q Consensus 173 ~~~~~~~~--~~~~-----~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~ 245 (342)
+....... .... ...+.....+++.|.++.++++.......++-|+..... ....+..+...... .....
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~--~~l~i~~~~~~~~~-~~~~d 174 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSS--NELHISKDKALQRQ-FTLDD 174 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCS--SCCEEEECHHHHHT-CCSSC
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccC--Cceeeecchhhccc-cccCC
Confidence 65433210 1110 111233578999999888877776655566566521000 01111111000000 01124
Q ss_pred eeEEEEcCCCC-eEEEecCCCeEEEEeCCCceeee--ccC-CC------CcceEEEEECCCCCEEEEE
Q 019384 246 VNAIAFHPIYG-TFATGGCDGFVNVWDGNNKKRLY--QYS-KY------PTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 246 v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~~~~--~~~-~~------~~~V~~v~~spdg~~las~ 303 (342)
+.+++|+|... +++.....+.+.++|.+.. .+. .+. +. ...-..|+|.|+|++.+++
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 68899999755 5677778889999997743 332 232 11 1356899999999977764
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.34 E-value=0.089 Score=48.08 Aligned_cols=150 Identities=13% Similarity=0.064 Sum_probs=88.1
Q ss_pred CeEEEEEcC-CCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCC-eEEEec-CCc---EEEEEeccCce-
Q 019384 21 GISNLRFSN-HSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSS-GFSASA-DHT---VRRLVFSHGKE- 93 (342)
Q Consensus 21 ~V~~l~fs~-~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~-~~s~s~-D~~---i~~w~~~~~~~- 93 (342)
....|+|+| ++..|..+...+.|+.+|..++.+............++|.+++. ++.+.. ++. ..+|....+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 557899998 45556555555899999998876655544455688999987776 655543 221 22333333221
Q ss_pred --eecccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCC--CCcEEEEeccCCeEEEE-EcCCe
Q 019384 94 --DILGKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQ--PERVYSLSLVGNRLVVA-TAGRH 167 (342)
Q Consensus 94 --~~~~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~--~~~v~~~s~~~~~~~~~-s~d~~ 167 (342)
..+. .......++++| ++.++++-..++.|..+|...... ..+..... ...-+.++.+++.++.+ ...+.
T Consensus 218 ~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~---~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 218 VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET---TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE---EEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE---EEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 1221 123456788999 566566666678899999764221 11111111 12234566677755444 45578
Q ss_pred EEEEeCC
Q 019384 168 VNVYDLR 174 (342)
Q Consensus 168 v~iwd~~ 174 (342)
|..++..
T Consensus 294 I~~~~~d 300 (430)
T 3tc9_A 294 ILRSDYD 300 (430)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 8887764
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.33 E-value=0.091 Score=48.05 Aligned_cols=153 Identities=12% Similarity=0.029 Sum_probs=87.0
Q ss_pred CCeEEEEEcCC--CCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCC----cEEEEEeccCc-
Q 019384 20 DGISNLRFSNH--SDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADH----TVRRLVFSHGK- 92 (342)
Q Consensus 20 ~~V~~l~fs~~--~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~----~i~~w~~~~~~- 92 (342)
.....|+|+|+ ...|..+...+.|+.+|..++.+...........+++|.+++.++.+...+ .-.++......
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 35678999985 444544544489999999877766655545568899998777776655422 11122211111
Q ss_pred e--eecccCCcceeEEEEeC-CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCC-CcEEEEeccCCeEEEE-EcCCe
Q 019384 93 E--DILGKHDAPVRCIEYSY-AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQP-ERVYSLSLVGNRLVVA-TAGRH 167 (342)
Q Consensus 93 ~--~~~~~h~~~V~~~~~~~-~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~-~~v~~~s~~~~~~~~~-s~d~~ 167 (342)
. ..+. .......+++.| ++.+.++-..++.|..+|..++... .......... ..-+.++.+++.+..+ ...+.
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 1 1111 123345688888 5555556666788999997643210 1111111111 1124566667755544 45578
Q ss_pred EEEEeCC
Q 019384 168 VNVYDLR 174 (342)
Q Consensus 168 v~iwd~~ 174 (342)
|+.+|+.
T Consensus 297 I~~~~~d 303 (433)
T 4hw6_A 297 IYRVDYN 303 (433)
T ss_dssp EEEEEBC
T ss_pred EEEEeCC
Confidence 8888764
No 271
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.33 E-value=0.07 Score=46.71 Aligned_cols=262 Identities=10% Similarity=0.108 Sum_probs=124.0
Q ss_pred CCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCcee-eee-e---ecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc
Q 019384 18 PSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVL-RGE-F---MHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK 92 (342)
Q Consensus 18 ~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~-~~~-~---~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~ 92 (342)
....+.+|.|.+++..++ ++.+|.|. .-.+.++. ... . .....+.++.|.+ +.++.++.++.+.. ..+.++
T Consensus 34 ~~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp CSSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTS
T ss_pred CCCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCC
Confidence 345799999988777777 56677653 23333331 111 1 1234678888875 55666666664422 222222
Q ss_pred -eeecc---cCCcceeEEEEeCCCCEEEEeeCCCcE-EEEcCCCCCCcceeeeeecCCCCcEEEEeccC-CeEEEEEcCC
Q 019384 93 -EDILG---KHDAPVRCIEYSYAAGQVITGSWDKSL-KCWDPRGASGQERTLVGTYPQPERVYSLSLVG-NRLVVATAGR 166 (342)
Q Consensus 93 -~~~~~---~h~~~V~~~~~~~~~~~l~sgs~D~~I-~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~-~~~~~~s~d~ 166 (342)
...+. .+...+..+.+.+++..++.+ .++.| +-+|- +.. -.... ......+..+.+.+ +.++.++.++
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~Dg--G~t--W~~~~-~~~~~~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDS--GKN--WQALV-QEAIGVMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESST--TSS--EEEEE-CSCCCCEEEEEECTTSCEEEEETTS
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCC--CCC--CEEee-cCCCcceEEEEEcCCCcEEEEECCC
Confidence 11111 233457778777666555544 46655 44442 111 11111 11223344554432 2344444444
Q ss_pred e-EEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeee
Q 019384 167 H-VNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYP 245 (342)
Q Consensus 167 ~-v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~ 245 (342)
. .+..|-. +. .-+............+.+.+++..++. +.++.+. ..+.... ..|.... .........
T Consensus 184 ~~~~S~d~g-G~-tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~--~s~~D~G---~tW~~~~----~~~~~~~~~ 251 (327)
T 2xbg_A 184 SFYSTWEPG-QT-AWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIA--FSDPDNS---ENWGELL----SPLRRNSVG 251 (327)
T ss_dssp SEEEEECTT-CS-SCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEE--EEETTEE---EEECCCB----CTTSSCCSC
T ss_pred cEEEEeCCC-CC-ceeECCCCCCCccceeEECCCCCEEEE-eCCceEE--EecCCCC---CeeEecc----CCcccCCcc
Confidence 3 3334421 10 011111112233556667777765544 4455432 2211000 0010000 000000113
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC---CCCcceEEEEECCCCCEEEEE
Q 019384 246 VNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS---KYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 246 v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~---~~~~~V~~v~~spdg~~las~ 303 (342)
+.++++.+++..++.+. +|.| ++..+.++....+. .....++++.|.++++++++|
T Consensus 252 ~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 252 FLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp EEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC
T ss_pred eEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc
Confidence 67888998877777665 6777 44444444433322 234678899998777766654
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.33 E-value=0.075 Score=47.04 Aligned_cols=239 Identities=11% Similarity=0.019 Sum_probs=126.9
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeE-EEecCCcEEEEEeccCceee-c
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGF-SASADHTVRRLVFSHGKEDI-L 96 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~-s~s~D~~i~~w~~~~~~~~~-~ 96 (342)
++.++.+..++..++++ ....|+..++.+............+.+++|.+ ++.++ +-...+.|..++........ +
T Consensus 34 d~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp TSSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCcccccccCceeEee--cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 44556655554433333 44568888887655444333445578999984 55555 44456778888877655332 2
Q ss_pred ccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecC-CCCcEEEEeccCCeEE-EEEcC-CeEEEEe
Q 019384 97 GKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYP-QPERVYSLSLVGNRLV-VATAG-RHVNVYD 172 (342)
Q Consensus 97 ~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~~~-~~s~d-~~v~iwd 172 (342)
.........+++.+.++.| .+-...+.|.+.+++.... ..+.... ....-+.+++.+..+. +-... +.|..++
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~---~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce---EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 2223446789999866555 5556678899999864221 2221111 1112233444334444 33333 6788888
Q ss_pred CCCCCCcccccccccceeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEE
Q 019384 173 LRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAF 251 (342)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~ 251 (342)
+...... ......+ ...+.+++.|++..+..+ +..+. |+.+|.... . +...+.. ... ....+++
T Consensus 189 ~dG~~~~-~~~~~~~-~~PnGla~d~~~~~lY~aD~~~~~--I~~~~~dG~-~-~~~~~~~------~~~---~P~giav 253 (349)
T 3v64_C 189 MDGSGRR-IIADTHL-FWPNGLTIDYAGRRMYWVDAKHHV--IERANLDGS-H-RKAVISQ------GLP---HPFAITV 253 (349)
T ss_dssp TTSCSCE-ESCCSSC-SCEEEEEEETTTTEEEEEETTTTE--EEEEETTSC-S-CEEEECS------SCS---SEEEEEE
T ss_pred CCCCCcE-EEEECCC-CCcceEEEeCCCCEEEEEECCCCE--EEEEeCCCC-c-eEEEEeC------CCC---CceEEEE
Confidence 7643211 1111111 246788999876666555 44443 455665321 1 1111110 001 1345666
Q ss_pred cCCCCeEEEecCCCeEEEEeCCCceeee
Q 019384 252 HPIYGTFATGGCDGFVNVWDGNNKKRLY 279 (342)
Q Consensus 252 sp~~~~l~sgs~Dg~I~iWd~~~~~~~~ 279 (342)
. .+..+++-...+.|..++..+++.+.
T Consensus 254 ~-~~~ly~td~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 254 F-EDSLYWTDWHTKSINSANKFTGKNQE 280 (349)
T ss_dssp E-TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred E-CCEEEEecCCCCeEEEEEccCCCccE
Confidence 3 45666777778888888855554433
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.27 E-value=0.11 Score=47.56 Aligned_cols=235 Identities=9% Similarity=0.041 Sum_probs=118.4
Q ss_pred eEEEEEeCC---CCeEEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEeeCC---C-cEEEEcCCCCCCc
Q 019384 63 VLDCCFHDD---SSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWD---K-SLKCWDPRGASGQ 135 (342)
Q Consensus 63 V~~~~~~~~---~~~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sgs~D---~-~I~iWd~~~~~~~ 135 (342)
...++|.++ +.++.+-..+.|+.++..++....+.........++++++++++++.... . .+...+.......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 457888763 66666654478888888777655554445568899999999855554321 1 2333332211110
Q ss_pred ceeeeeecCCCCcEEEEec-cCCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc-cCCeEE
Q 019384 136 ERTLVGTYPQPERVYSLSL-VGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS-VEGRVA 213 (342)
Q Consensus 136 ~~~~~~~~~~~~~v~~~s~-~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s-~~~~~~ 213 (342)
...+.....+.. +.++. .++..++-..++.|..+|..++.................++++|+++.++++. ....+
T Consensus 221 -~~~~~~~~~P~g-iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I- 297 (433)
T 4hw6_A 221 -RLSLCNARGAKT-CAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI- 297 (433)
T ss_dssp -EEEEEECSSBCC-CEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE-
T ss_pred -cccccccCCCCE-EEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE-
Confidence 011222222221 23555 33333343455678889887543211111111111234688999998555554 44544
Q ss_pred EEEeechhhhhcc--cceeeeE---EecCCC---CceeeeeeEEEE---------cCCCCeEEEecCCCeEEEEeCCCce
Q 019384 214 MEFFDLSEASQAK--KYAFKCH---RKSEAG---RDIVYPVNAIAF---------HPIYGTFATGGCDGFVNVWDGNNKK 276 (342)
Q Consensus 214 i~~~d~~~~~~~~--~~~~~~h---~~~~~~---~~~~~~v~~v~~---------sp~~~~l~sgs~Dg~I~iWd~~~~~ 276 (342)
+.++........ ...+.+. .....+ .........+++ .++|.++++-...+.|+.++.. +.
T Consensus 298 -~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~ 375 (433)
T 4hw6_A 298 -YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-GR 375 (433)
T ss_dssp -EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-SE
T ss_pred -EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-CC
Confidence 445543211100 1111111 000000 000112456888 6777778887888899999853 43
Q ss_pred eeecc-------CC----------CCcceEEEEEC-CCCCEEEE
Q 019384 277 RLYQY-------SK----------YPTSIAALSFS-RDGRLLAV 302 (342)
Q Consensus 277 ~~~~~-------~~----------~~~~V~~v~~s-pdg~~las 302 (342)
..... .+ .-..-..|+++ ++|.++++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa 419 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIG 419 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEE
Confidence 22111 01 11246799999 66665553
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.19 E-value=0.12 Score=46.65 Aligned_cols=238 Identities=8% Similarity=-0.022 Sum_probs=124.8
Q ss_pred CCCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeEEE-ecCCcEEEEEeccC----c-eeecccCCcceeEEEEeCC
Q 019384 39 WDKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGFSA-SADHTVRRLVFSHG----K-EDILGKHDAPVRCIEYSYA 111 (342)
Q Consensus 39 ~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~s~-s~D~~i~~w~~~~~----~-~~~~~~h~~~V~~~~~~~~ 111 (342)
....|+..++..............+.+++|.+ ++.++-+ ...+.|..+++... . ...+.........+++.+.
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 35789999987765444444566788999985 4555544 45677888887652 1 2223333456778999985
Q ss_pred CCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEE-c-CCeEEEEeCCCCCCcccccccccc
Q 019384 112 AGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVAT-A-GRHVNVYDLRNMSQPEQRRESSLK 188 (342)
Q Consensus 112 ~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s-~-d~~v~iwd~~~~~~~~~~~~~~~~ 188 (342)
++.| .+-...+.|.+.|++... ....+........-+.+++....++.+. . ...|...++....... .....+
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~--~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~-~~~~~l- 245 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTENI- 245 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCS--EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE-EECSSC-
T ss_pred CCceEEEECCCCeEEEEeCCCCc--eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE-EEECCC-
Confidence 5555 555667889999986422 1122211111112233444334444333 2 2568888876432211 111111
Q ss_pred eeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE
Q 019384 189 YQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV 267 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I 267 (342)
...+.+++.+++..+..+. .... |+.+|.... . +...+... .... + ...+++. .+..+++-...+.|
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~--I~~~d~dG~-~-~~~~~~~~----~~l~--~-P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHS--ISSIDVNGG-N-RKTILEDE----KRLA--H-PFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTE--EEEEETTSC-C-CEEEEECS----STTS--S-EEEEEEE-TTEEEEEESSSCSE
T ss_pred CceEEEEEEeCCCEEEEEECCCCE--EEEEeCCCC-c-cEEEEeCC----CCCC--C-CEEEEEe-CCEEEEecCCCCeE
Confidence 2467888998776665553 4443 455666321 1 11111100 0001 1 2245553 34567777777889
Q ss_pred EEEeCCCceeeeccCCCCcceEEEE
Q 019384 268 NVWDGNNKKRLYQYSKYPTSIAALS 292 (342)
Q Consensus 268 ~iWd~~~~~~~~~~~~~~~~V~~v~ 292 (342)
..+|..+++.+..+........+++
T Consensus 314 ~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 314 FSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp EEEESSSCCCCEEEECSCSCEEEEE
T ss_pred EEEEcCCCCceEEEecCCCCCceEE
Confidence 9998766655544433223334443
No 275
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.14 E-value=0.17 Score=48.40 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=60.9
Q ss_pred CCeEEEEeC-CCcEEEEEC-CCceeeeeeecCCc------------eEEEEEe-CCCC----eEEEecCCcEEEEEeccC
Q 019384 31 SDHLLVSSW-DKSVRLYDA-SANVLRGEFMHGGP------------VLDCCFH-DDSS----GFSASADHTVRRLVFSHG 91 (342)
Q Consensus 31 ~~~l~s~s~-Dgti~vwd~-~~~~~~~~~~h~~~------------V~~~~~~-~~~~----~~s~s~D~~i~~w~~~~~ 91 (342)
+..|..++. ++.|.-+|. .+++.+-.+..... ...+.+. .++. ++.++.|+.+.-+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345666777 899999999 88876655433221 1123443 3455 788889999999998888
Q ss_pred cee---ecccCC--cceeE-EEEeCCCCEEEEee------CCCcEEEEcCCCCC
Q 019384 92 KED---ILGKHD--APVRC-IEYSYAAGQVITGS------WDKSLKCWDPRGAS 133 (342)
Q Consensus 92 ~~~---~~~~h~--~~V~~-~~~~~~~~~l~sgs------~D~~I~iWd~~~~~ 133 (342)
+.. .+..+. ..+.+ -.+. ++ .++.++ .++.|..+|.+++.
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCc
Confidence 743 121111 12221 1111 33 555554 38999999988654
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.03 E-value=0.17 Score=45.40 Aligned_cols=211 Identities=9% Similarity=0.042 Sum_probs=110.6
Q ss_pred eEEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEEEcCCCCCCcceeeee-ecCCCCcEEE
Q 019384 74 GFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKCWDPRGASGQERTLVG-TYPQPERVYS 151 (342)
Q Consensus 74 ~~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~~~~~~~~~~~-~~~~~~~v~~ 151 (342)
.+..+....|+.+++.......+.........++|.+.++.|+ +-...+.|..+++..... ...+. ....+ .-+.
T Consensus 89 ~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~~~p-~gla 165 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV--EEVVSTGLESP-GGLA 165 (386)
T ss_dssp EEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE--EEEECSSCSCC-CCEE
T ss_pred eeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc--EEEEeCCCCCc-cEEE
Confidence 3444455677777776655433333334578999998666554 555667899999864321 11111 11112 2245
Q ss_pred EeccCCeEE-EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee
Q 019384 152 LSLVGNRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF 230 (342)
Q Consensus 152 ~s~~~~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 230 (342)
+++.+..++ +-...+.|.+.++...... ...... -.....+++.|.+..++.......-.|+.++.... ......
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~~-~l~~~~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~~ 241 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHRK-VLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--GRRIIA 241 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSCE-EEECSS-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEEE
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCceE-EeecCC-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC--CcEEEE
Confidence 665444444 4455567888887643211 111111 12467788888766665554333234455655321 111100
Q ss_pred eeEEecCCCCceeeeeeEEEEcCCCCe-EEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEE
Q 019384 231 KCHRKSEAGRDIVYPVNAIAFHPIYGT-FATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLA 301 (342)
Q Consensus 231 ~~h~~~~~~~~~~~~v~~v~~sp~~~~-l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 301 (342)
.. . ....+.|+++|++.. +++-+..+.|..+|.........+......-..|++ .++.++.
T Consensus 242 ~~--------~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~ 303 (386)
T 3v65_B 242 DT--------H-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYW 303 (386)
T ss_dssp CS--------S-CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEE
T ss_pred EC--------C-CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEE
Confidence 00 0 113578999986654 566667789999997643222222222334577888 3344333
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.01 E-value=0.16 Score=44.81 Aligned_cols=208 Identities=9% Similarity=0.033 Sum_probs=108.0
Q ss_pred ecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC
Q 019384 78 SADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG 156 (342)
Q Consensus 78 s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~ 156 (342)
+....|+..++.......+.........++|++.++.|+ +-...+.|..+++..... ............-+.+++.+
T Consensus 50 ~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~~~p~glavd~~~ 127 (349)
T 3v64_C 50 ANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV--EEVVSTGLESPGGLAVDWVH 127 (349)
T ss_dssp ECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSCCCEEEEETTT
T ss_pred ecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc--eEEEeCCCCCccEEEEecCC
Confidence 344556666665544333322334578999998666664 545668899999864322 11111111112234566544
Q ss_pred CeE-EEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 157 NRL-VVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 157 ~~~-~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
..+ ++-...+.|.+.++...... ...... -.....+++.|.+..++.......-.|+.++..... ....+.
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~-~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~---- 199 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRK-VLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIAD---- 199 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCE-EEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEESCC----
T ss_pred CeEEEEcCCCCeEEEEcCCCCceE-EEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--cEEEEE----
Confidence 444 44455578999988653211 111111 124678888986665555543322244556553211 110000
Q ss_pred cCCCCceeeeeeEEEEcCCCCe-EEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEE
Q 019384 236 SEAGRDIVYPVNAIAFHPIYGT-FATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLA 301 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~~-l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 301 (342)
......+.++++|++.. +++-+..+.|..+|.........+......-..|++ .++.++.
T Consensus 200 -----~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~ 260 (349)
T 3v64_C 200 -----THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYW 260 (349)
T ss_dssp -----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEE
T ss_pred -----CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEE
Confidence 00113578999986654 566666789999997643222212222334577888 3444333
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.99 E-value=0.15 Score=44.24 Aligned_cols=225 Identities=9% Similarity=0.001 Sum_probs=119.4
Q ss_pred CCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeE-EEecCCcEEEEEecc----Cc-eeecccCCcceeEEEEeCCC
Q 019384 40 DKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGF-SASADHTVRRLVFSH----GK-EDILGKHDAPVRCIEYSYAA 112 (342)
Q Consensus 40 Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~-s~s~D~~i~~w~~~~----~~-~~~~~~h~~~V~~~~~~~~~ 112 (342)
...|+..|+.+............+.++.|.+ ++.++ +-...+.|..++... .. ...+.........+++.+.+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 4568999998765544444456678999985 45565 444567888888775 22 22232222456789998766
Q ss_pred CEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcC--CeEEEEeCCCCCCcccccccccce
Q 019384 113 GQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAG--RHVNVYDLRNMSQPEQRRESSLKY 189 (342)
Q Consensus 113 ~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d--~~v~iwd~~~~~~~~~~~~~~~~~ 189 (342)
+.| ++-...+.|.+.|+.... .............-..+++.+..++.+..+ +.|..+++.... ........+ .
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~--~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~-~ 164 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENI-Q 164 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSC-S
T ss_pred CeEEEEECCCCEEEEEeCCCCc--eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCC-C
Confidence 555 555667899999976321 112221111111223344434444444332 578878775321 111111111 2
Q ss_pred eeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEE
Q 019384 190 QTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVN 268 (342)
Q Consensus 190 ~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~ 268 (342)
..+.+++.++++.+..+. ..+. |..+|.... ..+.+ ... ..... ....+++. .+..+++-...+.|.
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~--I~~~d~dg~-~~~~~-~~~----~~~~~---~P~giav~-~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHS--ISSIDVNGG-NRKTI-LED----EKRLA---HPFSLAVF-EDKVFWTDIINEAIF 232 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTE--EEEEETTSC-SCEEE-EEC----TTTTS---SEEEEEEE-TTEEEEEETTTTEEE
T ss_pred CceEEEEeccCCEEEEEECCCCe--EEEEecCCC-ceEEE-eec----CCccC---CcEEEEEE-CCEEEEEECCCCeEE
Confidence 467888998766665554 4444 455666421 11111 110 00001 12356664 356677777788999
Q ss_pred EEeCCCceeeec
Q 019384 269 VWDGNNKKRLYQ 280 (342)
Q Consensus 269 iWd~~~~~~~~~ 280 (342)
.++..+++.+..
T Consensus 233 ~~~~~~g~~~~~ 244 (316)
T 1ijq_A 233 SANRLTGSDVNL 244 (316)
T ss_dssp EEETTTCCCCEE
T ss_pred EEeCCCCcceEE
Confidence 998766654433
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.81 E-value=0.019 Score=56.00 Aligned_cols=240 Identities=8% Similarity=0.001 Sum_probs=119.4
Q ss_pred CCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeEEE-ecCCcEEEEEecc----Cce-eecccCCcceeEEEEeCCC
Q 019384 40 DKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGFSA-SADHTVRRLVFSH----GKE-DILGKHDAPVRCIEYSYAA 112 (342)
Q Consensus 40 Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~s~-s~D~~i~~w~~~~----~~~-~~~~~h~~~V~~~~~~~~~ 112 (342)
.+.|++.++.+............+.+++|.+ .+.++.+ ...+.|+.+++.. ... ..+.........+++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 4678888887655444333345567888875 4445443 3456788888765 221 2222122335568887655
Q ss_pred CE-EEEeeCCCcEEEEcCCCCCCcceeeeee-cCCCCcEEEEeccCCeEEEEE-cC-CeEEEEeCCCCCCcccccccccc
Q 019384 113 GQ-VITGSWDKSLKCWDPRGASGQERTLVGT-YPQPERVYSLSLVGNRLVVAT-AG-RHVNVYDLRNMSQPEQRRESSLK 188 (342)
Q Consensus 113 ~~-l~sgs~D~~I~iWd~~~~~~~~~~~~~~-~~~~~~v~~~s~~~~~~~~~s-~d-~~v~iwd~~~~~~~~~~~~~~~~ 188 (342)
+. +++-...+.|.+.++.... ....+.. ...+ .-+.+++.+..|+.+. .. +.|..+++....... .....+
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~--~~~l~~~~~~~P-~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~-l~~~~l- 539 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVK--RKTLFREQGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LVTENI- 539 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCC--EEEECCCSSCCC-CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE-ESCSSC-
T ss_pred CcEEEEeccCCeEEEEecCCCc--eEEEEeCCCCCc-ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE-EEeCCC-
Confidence 44 4555667889999976321 1111111 1112 2233444334444332 22 567666664321111 100111
Q ss_pred eeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE
Q 019384 189 YQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV 267 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I 267 (342)
...+.+++.|++..++++ +..+. |+.++.... ..+.+ +.... ... ....|++..+ ..+++....+.|
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~--I~~~d~dG~-~~~~~-~~~~~------~~~-~P~glavd~~-~lywtd~~~~~V 607 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHS--ISSIDVNGG-NRKTI-LEDEK------RLA-HPFSLAVFED-KVFWTDIINEAI 607 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTE--EEEECSSSS-CCEEE-CCCSS------SCS-SCCCCEEETT-EEEEECSTTTCE
T ss_pred CCccEEEEeccCCEEEEEecCCCe--EEEEccCCC-ceEEE-EecCC------cCC-CceEeEEECC-EEEEEeCCCCeE
Confidence 235678888876555544 44444 455666321 11111 11000 000 1224455443 566777778899
Q ss_pred EEEeCCCceeeeccCCCCcceEEEEECCC
Q 019384 268 NVWDGNNKKRLYQYSKYPTSIAALSFSRD 296 (342)
Q Consensus 268 ~iWd~~~~~~~~~~~~~~~~V~~v~~spd 296 (342)
..++..+++.+..+.......++|++..+
T Consensus 608 ~~~d~~~G~~~~~i~~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 608 FSANRLTGSDVNLLAENLLSPEDMVLFHQ 636 (699)
T ss_dssp EEEETTTEEEEECCCTTCSSCCCCCBCSS
T ss_pred EEEEccCCCceEEeecCCCCCcEEEEeCc
Confidence 99998888777666433333455555433
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.79 E-value=0.23 Score=43.25 Aligned_cols=202 Identities=10% Similarity=0.063 Sum_probs=103.1
Q ss_pred CCcEEEEEeccCc--eeecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccC
Q 019384 80 DHTVRRLVFSHGK--EDILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVG 156 (342)
Q Consensus 80 D~~i~~w~~~~~~--~~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~ 156 (342)
...|+..+++... ...+.........++|.+.++.| .+-...+.|..+++...... ...+........-+++++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCCccEEEEEcCC
Confidence 4567777776553 11222222346688999865555 45556678999998643211 11121111112234566544
Q ss_pred CeEE-EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEe
Q 019384 157 NRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRK 235 (342)
Q Consensus 157 ~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~ 235 (342)
..++ +-...+.|.++++...... .... ..-.....+++.|.+..++.......-.|+.++.... . .. .+..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~-~l~~-~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~-~~-~~~~--- 162 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRK-VLFW-QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-S-RF-IIIN--- 162 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCE-EEEC-SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-S-CE-EEEC---
T ss_pred CeEEEEECCCCEEEEEECCCCcEE-EEEe-CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-C-eE-EEEE---
Confidence 4444 4455678999998653211 1111 1112457788888766555554322223445554321 1 11 1100
Q ss_pred cCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECC
Q 019384 236 SEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSR 295 (342)
Q Consensus 236 ~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~sp 295 (342)
. . ....+.++++|+++ ++++=+..+.|..+|...........+....-..+++..
T Consensus 163 --~--~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 163 --S--E-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE 218 (318)
T ss_dssp --S--S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET
T ss_pred --C--C-CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC
Confidence 0 0 11357899998655 456666778999999864322111122233456777743
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.76 E-value=0.3 Score=44.06 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=105.7
Q ss_pred EEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEEEcCCCCC--CcceeeeeecCCCCcEEE
Q 019384 75 FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKCWDPRGAS--GQERTLVGTYPQPERVYS 151 (342)
Q Consensus 75 ~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~~~--~~~~~~~~~~~~~~~v~~ 151 (342)
+..+....|+..++.......+......+..++|++.++.|+ +-...+.|..+++.... ......+........-++
T Consensus 86 ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp EEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred eEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 444455778888777665444444456788999998766664 44556789999876421 111111211111112234
Q ss_pred EeccCCeEE-EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee
Q 019384 152 LSLVGNRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF 230 (342)
Q Consensus 152 ~s~~~~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 230 (342)
+++.++.|+ +-...+.|.+.|+..... ....... -.....+++.|.+..++.......-.|+.++.... .....+
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~--~~~~~~ 241 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLV 241 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC--SCEEEE
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC--ccEEEE
Confidence 554344444 445567888888865321 1111111 12357788888666555544322123444554321 111100
Q ss_pred eeEEecCCCCceeeeeeEEEEcCCCCeE-EEecCCCeEEEEeCCCcee--eeccCCCCcceEEEEE
Q 019384 231 KCHRKSEAGRDIVYPVNAIAFHPIYGTF-ATGGCDGFVNVWDGNNKKR--LYQYSKYPTSIAALSF 293 (342)
Q Consensus 231 ~~h~~~~~~~~~~~~v~~v~~sp~~~~l-~sgs~Dg~I~iWd~~~~~~--~~~~~~~~~~V~~v~~ 293 (342)
.. . ....+.|+++|+++.| ++-+..+.|...|.+.... +.........-.+|++
T Consensus 242 ~~--------~-l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 242 TE--------N-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp CS--------S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE
T ss_pred EC--------C-CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE
Confidence 00 0 1135789999876655 5556678999999864322 2221122233457777
No 282
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.75 E-value=0.23 Score=42.71 Aligned_cols=184 Identities=9% Similarity=-0.036 Sum_probs=95.6
Q ss_pred CCeEEEEEcCCCCeEEEEeCCC--cEEEEECCCceeeeeeec--CCceEEEEEeCCCCeEEEe-cCCcEEEEEeccCcee
Q 019384 20 DGISNLRFSNHSDHLLVSSWDK--SVRLYDASANVLRGEFMH--GGPVLDCCFHDDSSGFSAS-ADHTVRRLVFSHGKED 94 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dg--ti~vwd~~~~~~~~~~~h--~~~V~~~~~~~~~~~~s~s-~D~~i~~w~~~~~~~~ 94 (342)
.....++|+++++++++..... .|..+|..++++...... ......++..+++.++.+. .++.|..++...+...
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 4578899999998766654433 355667666655433221 1223344444444444433 4677766665543211
Q ss_pred ec-----------ccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCC-CCCcceeeeeecCCCCcEEEEeccCCeEEE
Q 019384 95 IL-----------GKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRG-ASGQERTLVGTYPQPERVYSLSLVGNRLVV 161 (342)
Q Consensus 95 ~~-----------~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~-~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~ 161 (342)
.. ...-...+.+ +++++.| ++-+..+.|..+|+.. +.......+.....+ .-++++.+++.+++
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P-~gi~vd~dG~l~va 228 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNI-DDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCC-SSEEEBTTCCEEEE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCC-CCeEECCCCCEEEE
Confidence 10 0111233455 7777665 5556678999999864 111111112211122 22456666665555
Q ss_pred EEcCCeEEEEeCCCCCCcccccccccc-eeeEEEEEe---eCCceEEEEcc
Q 019384 162 ATAGRHVNVYDLRNMSQPEQRRESSLK-YQTRCVRCY---PNGTGYALSSV 208 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~---~~~~~~~~~s~ 208 (342)
....+.|..+|.. ++.... ...... ....++++. |+++.+++.+.
T Consensus 229 ~~~~~~V~~~~~~-G~~~~~-~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 229 THIYNSVVRIAPD-RSTTII-AQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CBTTCCEEEECTT-CCEEEE-ECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred eCCCCeEEEECCC-CCEEEE-eecccccCCceEEEEecccCCCCEEEEECC
Confidence 5556789999875 322111 011111 246777777 77666655543
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.71 E-value=0.35 Score=47.75 Aligned_cols=215 Identities=11% Similarity=0.021 Sum_probs=108.9
Q ss_pred EEEecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCCC--cceeeeeecCCCCcEEE
Q 019384 75 FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGASG--QERTLVGTYPQPERVYS 151 (342)
Q Consensus 75 ~s~s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~~--~~~~~~~~~~~~~~v~~ 151 (342)
+..+....|+..++.......+......+..++|.+..+.| .+-...+.|+.+++..... .....+........-++
T Consensus 398 Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 398 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp EEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred cccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 33444556777766655543343344567899999866555 4555667899898864211 11122221111223355
Q ss_pred EeccCCeEE-EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee
Q 019384 152 LSLVGNRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF 230 (342)
Q Consensus 152 ~s~~~~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 230 (342)
+++.++.|+ +-...+.|.+.++..... .......+ .....|++.|.+..++.......-.|+..++.... +...+
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l-~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~--~~~lv 553 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLV 553 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTT-CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEEEE
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCC-CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc--eEEEE
Confidence 666565444 445567899999865321 11111111 24678888887665555543321234455553211 11111
Q ss_pred eeEEecCCCCceeeeeeEEEEcCCCCeE-EEecCCCeEEEEeCCCceeeeccC--CCCcceEEEEECCCCCEEEEEE
Q 019384 231 KCHRKSEAGRDIVYPVNAIAFHPIYGTF-ATGGCDGFVNVWDGNNKKRLYQYS--KYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 231 ~~h~~~~~~~~~~~~v~~v~~sp~~~~l-~sgs~Dg~I~iWd~~~~~~~~~~~--~~~~~V~~v~~spdg~~las~s 304 (342)
.. .....+.|++.+.++.| ++=...+.|...+.........+. +....-.+|++. +.+|-.+.
T Consensus 554 ~~---------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD 619 (791)
T 3m0c_C 554 TE---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTD 619 (791)
T ss_dssp CS---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEE
T ss_pred eC---------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEE
Confidence 00 01136789999766554 555666789999886433222221 122234566663 33444444
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.68 E-value=0.57 Score=46.26 Aligned_cols=223 Identities=9% Similarity=0.019 Sum_probs=116.1
Q ss_pred CCCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeE-EEecCCcEEEEEeccC----c-eeecccCCcceeEEEEeCC
Q 019384 39 WDKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGF-SASADHTVRRLVFSHG----K-EDILGKHDAPVRCIEYSYA 111 (342)
Q Consensus 39 ~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~-s~s~D~~i~~w~~~~~----~-~~~~~~h~~~V~~~~~~~~ 111 (342)
....|+..++..............+.+++|.. .+.++ +-...+.|+.+++... . ..++.........|++.+.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 45668888887655444444556778899975 45555 4445567887877653 1 2233333455678999987
Q ss_pred CCEE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEE-cC-CeEEEEeCCCCCCcccccccccc
Q 019384 112 AGQV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVAT-AG-RHVNVYDLRNMSQPEQRRESSLK 188 (342)
Q Consensus 112 ~~~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s-~d-~~v~iwd~~~~~~~~~~~~~~~~ 188 (342)
++.| .+-...+.|.+.++.... ....+........-+.+++....|+.+- .. ..|...++...... ......+
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~--~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-~lv~~~l- 557 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTENI- 557 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEECSSC-
T ss_pred CCcEEEEecCCCeEEEEeCCCCe--EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-EEEeCCC-
Confidence 7655 455667899999986321 1122211111112233444434454443 22 57888887643211 1111111
Q ss_pred eeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE
Q 019384 189 YQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV 267 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I 267 (342)
...+.|++.+.+..++++. ... .|+.+++... .+...+... ....++ .+|++.. +..+++-...+.|
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~--~I~~~d~dG~--~~~~v~~~~------~~l~~P-~glav~~-~~lYwtD~~~~~I 625 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLH--SISSIDVNGG--NRKTILEDE------KRLAHP-FSLAVFE-DKVFWTDIINEAI 625 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTT--EEEEEETTSC--SCEEEEECT------TTTSSE-EEEEEET-TEEEEEETTTTEE
T ss_pred CCceEEEEecCCCeEEEEeCCCC--cEEEEecCCC--ceEEEecCC------CccCCC-CEEEEeC-CEEEEEECCCCEE
Confidence 2467788887666655553 333 3455665322 111111100 001112 2455543 3566777777888
Q ss_pred EEEeCCCcee
Q 019384 268 NVWDGNNKKR 277 (342)
Q Consensus 268 ~iWd~~~~~~ 277 (342)
...+..+++.
T Consensus 626 ~~~dk~tG~~ 635 (791)
T 3m0c_C 626 FSANRLTGSD 635 (791)
T ss_dssp EEEETTTCCC
T ss_pred EEEeCCCCcc
Confidence 8887655543
No 285
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.60 E-value=0.84 Score=47.13 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=94.2
Q ss_pred CCCeEEEEEcCC------CCeEEEEeC-CCcEEEEECCCceeeeeeec--CCceEEEEEe--CCC-CeEEEecCCcEEEE
Q 019384 19 SDGISNLRFSNH------SDHLLVSSW-DKSVRLYDASANVLRGEFMH--GGPVLDCCFH--DDS-SGFSASADHTVRRL 86 (342)
Q Consensus 19 ~~~V~~l~fs~~------~~~l~s~s~-Dgti~vwd~~~~~~~~~~~h--~~~V~~~~~~--~~~-~~~s~s~D~~i~~w 86 (342)
.+.|.|+++.+. ++.+|.|.+ |++++|+.+..-.......- .....++++. .+. .++.+-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999864 368999997 99999999976444333222 2234455543 222 24577788887666
Q ss_pred Eecc--Cce----eecccCCcceeEEEEeCCCC-EEEEeeCCCcEEEEcCCCCCCcceeeeeecC--CCCcEEEEec--c
Q 019384 87 VFSH--GKE----DILGKHDAPVRCIEYSYAAG-QVITGSWDKSLKCWDPRGASGQERTLVGTYP--QPERVYSLSL--V 155 (342)
Q Consensus 87 ~~~~--~~~----~~~~~h~~~V~~~~~~~~~~-~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~--~~~~v~~~s~--~ 155 (342)
.++. +.. ...-| ..++.-..+...+. .++.+| |+..-++--+ .. ..+.... .-..+..|+. .
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~--~~---l~~s~l~~~~v~~~~~F~se~~ 705 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN--HK---LVFSNVNLKEVNYMCPLNSDGY 705 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS--SS---EEEEEBSSSCCCEEEEECCSSS
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC--Cc---eEEeccChHHhceEeccCcccC
Confidence 5543 221 11222 33454444443333 333333 3433333222 11 1111111 1112333433 2
Q ss_pred CCeEEEEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc
Q 019384 156 GNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS 207 (342)
Q Consensus 156 ~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s 207 (342)
++.++.++ ++.++|.-+.+... ......++...+..++++|+.+.++++.
T Consensus 706 ~~g~v~~~-~~~LrI~~i~~~~~-~~~~~ipL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 706 PDSLALAN-NSTLTIGTIDEIQK-LHIRTVPLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp TTEEEEEC-SSCEEEEEECCSSS-EEEEEEECSSEEEEEEEEGGGTEEEEEE
T ss_pred CCcEEEEc-CCceEEEEecccCC-eeEEEEeCCCCceEEEEcCCCCEEEEEE
Confidence 45666444 55699888755422 1222334556678888888877665554
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.53 E-value=0.36 Score=42.14 Aligned_cols=192 Identities=10% Similarity=0.105 Sum_probs=103.1
Q ss_pred eeEEEEeCCCCEEEEee-CCCcEEEEcCCCCCCcceeeeeecC--C--CCcEEEEec---cC-CeEEEEEc---------
Q 019384 103 VRCIEYSYAAGQVITGS-WDKSLKCWDPRGASGQERTLVGTYP--Q--PERVYSLSL---VG-NRLVVATA--------- 164 (342)
Q Consensus 103 V~~~~~~~~~~~l~sgs-~D~~I~iWd~~~~~~~~~~~~~~~~--~--~~~v~~~s~---~~-~~~~~~s~--------- 164 (342)
-.+++|.+....|+.++ ..++|..||...+.... ..+.... . ......+.+ ++ +.++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~-~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN-VVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEE-ECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE-EecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 45788988667776665 78999999985322111 1111100 1 112345555 33 34444333
Q ss_pred -----CCeEEEEeCC---CCCCcccccccc-----------cceeeEEEEEeeCCceEEEEccC-CeEEEEEeechhhhh
Q 019384 165 -----GRHVNVYDLR---NMSQPEQRRESS-----------LKYQTRCVRCYPNGTGYALSSVE-GRVAMEFFDLSEASQ 224 (342)
Q Consensus 165 -----d~~v~iwd~~---~~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~~s~~-~~~~i~~~d~~~~~~ 224 (342)
+..|..||+. +++......... .......++..++|+..++++.. +.| +.++.... .
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I--~rV~pdG~-~ 170 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI--ARVSADGK-T 170 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE--EEECTTSC-C
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE--EEEeCCCC-E
Confidence 4668899998 554321111000 11235678889999988888776 653 34554221 1
Q ss_pred cccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCcee--eeccC--C---CCcceEE-EEECCC
Q 019384 225 AKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKR--LYQYS--K---YPTSIAA-LSFSRD 296 (342)
Q Consensus 225 ~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~--~~~~~--~---~~~~V~~-v~~spd 296 (342)
...+.+.. . ........+.|+++|+|..|+.....|.+..+|+..... +. .. + ....... ++.-.+
T Consensus 171 ~~~~~~~~----~-~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~ 244 (334)
T 2p9w_A 171 VSTFAWES----G-NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVG 244 (334)
T ss_dssp EEEEEECC----C-CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEET
T ss_pred EeeeeecC----C-CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccC
Confidence 11111110 0 000111367899999999887776699999999875433 21 11 2 1112334 344457
Q ss_pred CCEEEEEE
Q 019384 297 GRLLAVAS 304 (342)
Q Consensus 297 g~~las~s 304 (342)
|+.|+++.
T Consensus 245 G~vllV~~ 252 (334)
T 2p9w_A 245 NESVLVGA 252 (334)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEc
Confidence 88755554
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.45 E-value=0.43 Score=42.06 Aligned_cols=188 Identities=12% Similarity=0.165 Sum_probs=100.8
Q ss_pred CCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCC----C-C--eEEEe--c--CCcEEEEEec--cCceeec
Q 019384 30 HSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDD----S-S--GFSAS--A--DHTVRRLVFS--HGKEDIL 96 (342)
Q Consensus 30 ~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~----~-~--~~s~s--~--D~~i~~w~~~--~~~~~~~ 96 (342)
...+++.....+-+.+||+ .++.+..+. .+.++.+..-++ + . ++.++ . ++++++++++ ++....+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEEC-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEcc-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 3455777777889999999 555544432 256666655432 1 1 23333 3 5789999774 3333322
Q ss_pred cc------CC-cceeEEEE--eCCCC--EEEEeeCCCcEEEEcCCCC-CC-cceeeeeecCCCCcEEEEecc--CCeEEE
Q 019384 97 GK------HD-APVRCIEY--SYAAG--QVITGSWDKSLKCWDPRGA-SG-QERTLVGTYPQPERVYSLSLV--GNRLVV 161 (342)
Q Consensus 97 ~~------h~-~~V~~~~~--~~~~~--~l~sgs~D~~I~iWd~~~~-~~-~~~~~~~~~~~~~~v~~~s~~--~~~~~~ 161 (342)
.. .. ..++.+++ ++.+. +++....++.+..|++... .+ .....+..+.....+-.+..+ ...++.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEE
Confidence 11 12 45666777 66443 4677778899999987421 11 112233333333344444444 457888
Q ss_pred EEcCCeEEEEeCCCCC--C--ccccc-ccccceeeEEEEEe--eCCc-eEEEEccCCeEEEEEeech
Q 019384 162 ATAGRHVNVYDLRNMS--Q--PEQRR-ESSLKYQTRCVRCY--PNGT-GYALSSVEGRVAMEFFDLS 220 (342)
Q Consensus 162 ~s~d~~v~iwd~~~~~--~--~~~~~-~~~~~~~~~~v~~~--~~~~-~~~~~s~~~~~~i~~~d~~ 220 (342)
+-.+..|..+|.+-.. . ..... ...+...+..++.. ++++ ++++++.+. ..+.+||..
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~-~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN-SSYAIYDRQ 262 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG-TEEEEEESS
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC-CEEEEEECC
Confidence 8888667667754221 1 11111 12233356677764 4555 344444333 234567764
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.16 E-value=0.62 Score=41.08 Aligned_cols=68 Identities=9% Similarity=0.003 Sum_probs=44.4
Q ss_pred CceEEEEEeCCCCeEEEecCCcEEEEEeccCceee------cccCCcceeEEEEeCC---CCEEEEe-eCC-----CcEE
Q 019384 61 GPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDI------LGKHDAPVRCIEYSYA---AGQVITG-SWD-----KSLK 125 (342)
Q Consensus 61 ~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~------~~~h~~~V~~~~~~~~---~~~l~sg-s~D-----~~I~ 125 (342)
.....++|.+++.++.+..++.|.+++ .+.... ..........++++|+ +..|+.+ +.. ..|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 356789999888888888888888887 333211 1112346789999998 5555443 322 5677
Q ss_pred EEcCC
Q 019384 126 CWDPR 130 (342)
Q Consensus 126 iWd~~ 130 (342)
.++..
T Consensus 109 r~~~~ 113 (352)
T 2ism_A 109 RLRHL 113 (352)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77765
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.12 E-value=0.35 Score=45.99 Aligned_cols=56 Identities=18% Similarity=0.125 Sum_probs=34.9
Q ss_pred CCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEEcCCeEEEEeCCCCCCc
Q 019384 121 DKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQP 179 (342)
Q Consensus 121 D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s~d~~v~iwd~~~~~~~ 179 (342)
++.|..||+.+++.. ..... ........+...++.+++++.|+.++.||.++++..
T Consensus 465 ~G~l~A~D~~tG~~~--W~~~~-~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVV--WEHKE-HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEECTTTCCEE--EEEEE-SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEECCCCCEE--EEecC-CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 578999998765431 11111 111111123345677888999999999999998654
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.02 E-value=0.46 Score=41.87 Aligned_cols=180 Identities=14% Similarity=0.199 Sum_probs=91.1
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEE------EeccCCe--EEEEEc----CCeEEEEeCCCCCC
Q 019384 111 AAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYS------LSLVGNR--LVVATA----GRHVNVYDLRNMSQ 178 (342)
Q Consensus 111 ~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~------~s~~~~~--~~~~s~----d~~v~iwd~~~~~~ 178 (342)
...+++.....+.+.++|+. +.. ++.... ..... +...+.. ++.++. +++|++|++.....
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G~~-----l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-GKM-----LHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-SCE-----EEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred CccEEEEEcCCCCEEEEcCC-CcE-----EEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 33556666677889999984 221 111111 22222 3333332 444444 46899997732111
Q ss_pred ccccc-cc--cc--c-eeeEEEEE--eeC-Cc-eEEEEccCCeEEEEEeechhhhhc-ccceeeeEEecCCCCceeeeee
Q 019384 179 PEQRR-ES--SL--K-YQTRCVRC--YPN-GT-GYALSSVEGRVAMEFFDLSEASQA-KKYAFKCHRKSEAGRDIVYPVN 247 (342)
Q Consensus 179 ~~~~~-~~--~~--~-~~~~~v~~--~~~-~~-~~~~~s~~~~~~i~~~d~~~~~~~-~~~~~~~h~~~~~~~~~~~~v~ 247 (342)
..... .. ++ . .....++. .|. +. ++++...++.+. .|.+...... ....+...-.. ...+-
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~--q~~l~~~~~g~~~~~lVR~f~l------gsq~E 183 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFE--QYELKADKNGYISGKKVRAFKM------NSQTE 183 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEE--EEEEEECTTSCEEEEEEEEEEC------SSCEE
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEE--EEEEEeCCCCcccceEEEEecC------CCCcc
Confidence 11111 00 11 1 12233444 554 33 456666667554 3554321110 00111111111 11366
Q ss_pred EEEEcCCCCeEEEecCCCeEEEEeCC-----CceeeeccC-CC-CcceEEEEE--CCCCC-EEEEEEe
Q 019384 248 AIAFHPIYGTFATGGCDGFVNVWDGN-----NKKRLYQYS-KY-PTSIAALSF--SRDGR-LLAVASS 305 (342)
Q Consensus 248 ~v~~sp~~~~l~sgs~Dg~I~iWd~~-----~~~~~~~~~-~~-~~~V~~v~~--spdg~-~las~s~ 305 (342)
.|+..+....|..+-+|.-|..++.+ +++.+..+. ++ ...+..|++ .++|+ ||+++|.
T Consensus 184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 78888989999999999877777755 234454432 22 347888988 67777 7776663
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.94 E-value=0.74 Score=40.00 Aligned_cols=219 Identities=9% Similarity=-0.006 Sum_probs=115.8
Q ss_pred CCcEEEEECCCce--eeeeeecCCceEEEEEeC-CCCeE-EEecCCcEEEEEeccCce--eecccCCcceeEEEEeCCCC
Q 019384 40 DKSVRLYDASANV--LRGEFMHGGPVLDCCFHD-DSSGF-SASADHTVRRLVFSHGKE--DILGKHDAPVRCIEYSYAAG 113 (342)
Q Consensus 40 Dgti~vwd~~~~~--~~~~~~h~~~V~~~~~~~-~~~~~-s~s~D~~i~~w~~~~~~~--~~~~~h~~~V~~~~~~~~~~ 113 (342)
...|+..|+.... ..........+.++.|.+ ++.++ +-...+.|..++...... ..+...-.....+++.+.++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 5679999987653 111222234566888874 45554 444567788888766531 22222224567889987555
Q ss_pred EE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEE--EEeccCCeEEEEEc--CCeEEEEeCCCCCCcccccccccc
Q 019384 114 QV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVY--SLSLVGNRLVVATA--GRHVNVYDLRNMSQPEQRRESSLK 188 (342)
Q Consensus 114 ~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~~~~~s~--d~~v~iwd~~~~~~~~~~~~~~~~ 188 (342)
.| .+-...+.|.+++++.... ..+.. ....... .+++.+..+..+.. .+.|..+++...... ......+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~---~~l~~-~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~l- 165 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLR---KVLFW-QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-IIINSEI- 165 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSC---EEEEC-SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE-EEECSSC-
T ss_pred eEEEEECCCCEEEEEECCCCcE---EEEEe-CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE-EEEECCC-
Confidence 55 5556667899999864221 12211 1112223 34443344444432 357877877542111 1111111
Q ss_pred eeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE
Q 019384 189 YQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV 267 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I 267 (342)
...+.+++++++..+..+ +..+. |+.+|.... ..+.+ ... ... ....+++.. +..+++-...+.|
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~--I~~~d~dG~-~~~~~-~~~------~~~---~P~glav~~-~~lywtd~~~~~V 231 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNF--IHKSNLDGT-NRQAV-VKG------SLP---HPFALTLFE-DILYWTDWSTHSI 231 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTE--EEEEETTSC-SCEEE-ECS------CCS---CEEEEEEET-TEEEEEETTTTEE
T ss_pred CCccEEEEeccCCEEEEEECCCCE--EEEEcCCCC-ceEEE-ecC------CCC---CceEEEEeC-CEEEEEecCCCeE
Confidence 245788899866655554 44444 455665321 11111 110 001 134556643 4567777778899
Q ss_pred EEEeCCCceee
Q 019384 268 NVWDGNNKKRL 278 (342)
Q Consensus 268 ~iWd~~~~~~~ 278 (342)
..++..+++.+
T Consensus 232 ~~~~~~~G~~~ 242 (318)
T 3sov_A 232 LACNKYTGEGL 242 (318)
T ss_dssp EEEETTTCCSC
T ss_pred EEEECCCCCce
Confidence 99998666543
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.90 E-value=0.78 Score=39.90 Aligned_cols=153 Identities=10% Similarity=0.028 Sum_probs=83.1
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceee-eeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc-ee
Q 019384 17 PPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLR-GEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK-ED 94 (342)
Q Consensus 17 ~~~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~-~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~-~~ 94 (342)
+....+++++|.+++..++.+...+..+-+|-...... ........+..+.+.+++.++.++.++.+.+...+.+. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEC
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeE
Confidence 34457899999999887776644444444443121111 11234567788888888888888888876655322122 11
Q ss_pred ecc----cCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeec-CCCCcEEEEec-cCCeEEEEEcCCeE
Q 019384 95 ILG----KHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTY-PQPERVYSLSL-VGNRLVVATAGRHV 168 (342)
Q Consensus 95 ~~~----~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~-~~~~~v~~~s~-~~~~~~~~s~d~~v 168 (342)
.+. .+...+.++++.+++..++.+ .++.|. +..+.+.. -..+... ..+..+..+.+ +++.+++++.+|.|
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i~-~S~DgG~t--W~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i 315 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGALL-CSQDGGQT--WQQDVDVKKVPSNFYKILFFSPDQGFILGQKGIL 315 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCEE-EESSTTSS--CEECGGGTTSSSCCCEEEEEETTEEEEECSTTEE
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEe-CCCeEE-EeCCCCcc--cEEcCccCCCCCCeEEEEEECCCceEEEcCCceE
Confidence 111 123458889998876655554 577663 32222221 1111111 11122333433 45567778888877
Q ss_pred EEEeC
Q 019384 169 NVYDL 173 (342)
Q Consensus 169 ~iwd~ 173 (342)
.-++-
T Consensus 316 ~~~~~ 320 (327)
T 2xbg_A 316 LRYVT 320 (327)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 76653
No 293
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.84 E-value=0.8 Score=39.60 Aligned_cols=203 Identities=11% Similarity=0.071 Sum_probs=104.8
Q ss_pred ecCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEE-EEeeCCCcEEEEcCCCCC--Ccceeeee-ecCCCCcEEEEe
Q 019384 78 SADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQV-ITGSWDKSLKCWDPRGAS--GQERTLVG-TYPQPERVYSLS 153 (342)
Q Consensus 78 s~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sgs~D~~I~iWd~~~~~--~~~~~~~~-~~~~~~~v~~~s 153 (342)
+....|+..++.......+.........++|+++++.| .+-...+.|..+|+.... ......+. ....+ .-+.++
T Consensus 7 ~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-~glavd 85 (316)
T 1ijq_A 7 TNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP-DGLAVD 85 (316)
T ss_dssp ECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC-CEEEEE
T ss_pred ECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc-CEEEEe
Confidence 34456777887766533333334567899999876655 455566899999986410 11111121 11122 234555
Q ss_pred ccCCeEE-EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeee
Q 019384 154 LVGNRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKC 232 (342)
Q Consensus 154 ~~~~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 232 (342)
+.++.++ +-...+.|.++|+.... ........ -.....+++.|.+..++.......-.|+.++.... ... .+..
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~--~~~~ 160 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIY--SLVT 160 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSS-EEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEE--EEEC
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeE--EEEE
Confidence 5444444 44566789999986432 11111111 12467888888666555544332123444554221 111 0100
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCe-EEEecCCCeEEEEeCCCce--eeeccCCCCcceEEEEEC
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGT-FATGGCDGFVNVWDGNNKK--RLYQYSKYPTSIAALSFS 294 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~-l~sgs~Dg~I~iWd~~~~~--~~~~~~~~~~~V~~v~~s 294 (342)
......+.++++|+++. +++-+..+.|..+|..... .+............|++.
T Consensus 161 --------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 161 --------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp --------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred --------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE
Confidence 00113578999987665 4666677899999986422 222211122335677774
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.67 E-value=1.3 Score=40.94 Aligned_cols=208 Identities=12% Similarity=0.041 Sum_probs=103.4
Q ss_pred eEEEEEeC--CCCeEEEecC-CcEEEEEeccCceeeccc----CCcceeEEEE-------eCCCCEEEEeeCCC------
Q 019384 63 VLDCCFHD--DSSGFSASAD-HTVRRLVFSHGKEDILGK----HDAPVRCIEY-------SYAAGQVITGSWDK------ 122 (342)
Q Consensus 63 V~~~~~~~--~~~~~s~s~D-~~i~~w~~~~~~~~~~~~----h~~~V~~~~~-------~~~~~~l~sgs~D~------ 122 (342)
...++|.| ++.++.+-.. +.|++.|...+....+.. .......++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45677875 3455555433 467777877766544322 1235789999 99998665554443
Q ss_pred -cEEEEcCCCCCCcc----eeeeeecCCCCcEEEEeccCCeE-EEEEcCCeEEEEeCC-------CCCC--c---c----
Q 019384 123 -SLKCWDPRGASGQE----RTLVGTYPQPERVYSLSLVGNRL-VVATAGRHVNVYDLR-------NMSQ--P---E---- 180 (342)
Q Consensus 123 -~I~iWd~~~~~~~~----~~~~~~~~~~~~v~~~s~~~~~~-~~~s~d~~v~iwd~~-------~~~~--~---~---- 180 (342)
.|.+.+........ ...+....++..+ .+......| ++-..++.|..+|+. ++.. + .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~gi-avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGA-TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCE-EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEE-EEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 25666643211110 0123333333322 455533444 445566779999986 4432 0 0
Q ss_pred --cccccccceeeEEEEEeeCCceEEEE-ccCCeEEEEEeechhhhhcc--cceeeeE---EecCCC----CceeeeeeE
Q 019384 181 --QRRESSLKYQTRCVRCYPNGTGYALS-SVEGRVAMEFFDLSEASQAK--KYAFKCH---RKSEAG----RDIVYPVNA 248 (342)
Q Consensus 181 --~~~~~~~~~~~~~v~~~~~~~~~~~~-s~~~~~~i~~~d~~~~~~~~--~~~~~~h---~~~~~~----~~~~~~v~~ 248 (342)
.............++++|+++.+.++ +....+ +.++........ ...+.+. .....+ .....|-..
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I--~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYF--MRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE--EEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEE--EEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 00111111234678999999865555 444444 344432111100 0111111 000000 001112213
Q ss_pred EEEc-------CCCCeEEEecCCCeEEEEeCC
Q 019384 249 IAFH-------PIYGTFATGGCDGFVNVWDGN 273 (342)
Q Consensus 249 v~~s-------p~~~~l~sgs~Dg~I~iWd~~ 273 (342)
++.. +++.++++=...+.|+.++..
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~ 409 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE 409 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEECTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEeCC
Confidence 4444 456777777778899999843
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.45 E-value=1.6 Score=40.41 Aligned_cols=152 Identities=11% Similarity=0.024 Sum_probs=84.1
Q ss_pred CeEEEEEcCC-CC-eEEEEeCCCcEEEEECCCceeeeeeecC----CceEEEEE-------eCCCC-eEEEecCC-----
Q 019384 21 GISNLRFSNH-SD-HLLVSSWDKSVRLYDASANVLRGEFMHG----GPVLDCCF-------HDDSS-GFSASADH----- 81 (342)
Q Consensus 21 ~V~~l~fs~~-~~-~l~s~s~Dgti~vwd~~~~~~~~~~~h~----~~V~~~~~-------~~~~~-~~s~s~D~----- 81 (342)
.-..|+|+|. .. ++++-...+.|++.|+.++.+.....-. .....++| .+++. ++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 44 4444444578999999887765544321 24788999 87766 66665543
Q ss_pred c--EEEEEecc-Cce------eecccCCcceeEEEEeCCC-CEEEEeeCCCcEEEEcCC-------CCCC-----cc---
Q 019384 82 T--VRRLVFSH-GKE------DILGKHDAPVRCIEYSYAA-GQVITGSWDKSLKCWDPR-------GASG-----QE--- 136 (342)
Q Consensus 82 ~--i~~w~~~~-~~~------~~~~~h~~~V~~~~~~~~~-~~l~sgs~D~~I~iWd~~-------~~~~-----~~--- 136 (342)
. +.+.+... +.. ..+.. ......++++|++ .++++-..++.|..+|+. ++.. ..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 1 33333222 111 11111 1234567889855 445566677889999986 3322 00
Q ss_pred -eeeeeecC--CCCcEEEEeccCCeEEEE-EcCCeEEEEeC
Q 019384 137 -RTLVGTYP--QPERVYSLSLVGNRLVVA-TAGRHVNVYDL 173 (342)
Q Consensus 137 -~~~~~~~~--~~~~v~~~s~~~~~~~~~-s~d~~v~iwd~ 173 (342)
...+.... ....-++++.+++.+..+ +....|+.+|.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 00111111 112345566667755544 45567888654
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.32 E-value=0.077 Score=51.78 Aligned_cols=182 Identities=11% Similarity=0.071 Sum_probs=90.4
Q ss_pred cCCcEEEEEeccCceeecccCCcceeEEEEeCCCCEEEEe-eCCCcEEEEcCCCCC--Ccceeeee-ecCCCCcEEEEec
Q 019384 79 ADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITG-SWDKSLKCWDPRGAS--GQERTLVG-TYPQPERVYSLSL 154 (342)
Q Consensus 79 ~D~~i~~w~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg-s~D~~I~iWd~~~~~--~~~~~~~~-~~~~~~~v~~~s~ 154 (342)
....|+..++.......+......+..++|.+.++.|+-+ ...+.|+.+++.... ......+. ....+. -+.+++
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCC
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEe
Confidence 3456666766665543333333456788999877666544 455789999886410 01111111 111111 234554
Q ss_pred cCCeEE-EEEcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeE
Q 019384 155 VGNRLV-VATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 233 (342)
Q Consensus 155 ~~~~~~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h 233 (342)
.+..|+ +-...+.|.++++...... ...... ......+++.|.+..++.+.....-.|+.++.... . .. .+..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~-~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~-~~-~l~~- 536 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRK-TLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-D-IY-SLVT- 536 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEE-EECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-C-CC-EESC-
T ss_pred eCCcEEEEeccCCeEEEEecCCCceE-EEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-C-ee-EEEe-
Confidence 344444 3345567888887643211 111111 12345677777655555444322122333444211 1 11 0100
Q ss_pred EecCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCC
Q 019384 234 RKSEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNN 274 (342)
Q Consensus 234 ~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~ 274 (342)
......+.|+++|+++ ++++-+..+.|.+++...
T Consensus 537 -------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 537 -------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp -------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred -------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 0011256799998755 556667778999999864
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.99 E-value=0.85 Score=40.33 Aligned_cols=59 Identities=20% Similarity=0.190 Sum_probs=39.6
Q ss_pred eeeEEEEcCCCCeEEEec-----------------CCCeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEEEec
Q 019384 245 PVNAIAFHPIYGTFATGG-----------------CDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~sgs-----------------~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~~ 306 (342)
..+.+++.++|.++++.. ..|.|+.+|... +..+...-..-+.++|||||+.|..+.+.
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~---~~~~~~~l~~pNGia~spDg~~lYvadt~ 241 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND---VRVVAEGFDFANGINISPDGKYVYIAELL 241 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC---CEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe---EEEeecCCcccCcceECCCCCEEEEEeCC
Confidence 478899999999888865 135666666532 11111112345999999999988877753
No 298
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.96 E-value=1.4 Score=36.94 Aligned_cols=189 Identities=14% Similarity=0.084 Sum_probs=101.2
Q ss_pred CCeEEEEEcCCCCeEEE-EeCCCcEEEEECCCceeeeeeec--CCceEEEEEeCCCCeEEEe-cCCcEEEEEeccCce--
Q 019384 20 DGISNLRFSNHSDHLLV-SSWDKSVRLYDASANVLRGEFMH--GGPVLDCCFHDDSSGFSAS-ADHTVRRLVFSHGKE-- 93 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s-~s~Dgti~vwd~~~~~~~~~~~h--~~~V~~~~~~~~~~~~s~s-~D~~i~~w~~~~~~~-- 93 (342)
+.+..|+|+|+++.|.+ ...++.|...|.. +++.....- ....-++++..++.++.+. .++.+.++.+.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 46999999998776654 6677888888888 554443322 2456778887666664443 445666666544331
Q ss_pred --ee--c----ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCC-CCcceeeeee-------cCCCCcEEEEeccCC
Q 019384 94 --DI--L----GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGA-SGQERTLVGT-------YPQPERVYSLSLVGN 157 (342)
Q Consensus 94 --~~--~----~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~-~~~~~~~~~~-------~~~~~~v~~~s~~~~ 157 (342)
.. + .........++|+|+++.|+++.......+|..+.. .......... .......+++.+..+
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 11 1 123445789999999888877665554455543210 0000111110 000112233433333
Q ss_pred eE-EEEEcCCeEEEEeCCCCCCccccccccc------ceeeEEEEEeeCCceEEEEccCC
Q 019384 158 RL-VVATAGRHVNVYDLRNMSQPEQRRESSL------KYQTRCVRCYPNGTGYALSSVEG 210 (342)
Q Consensus 158 ~~-~~~s~d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~s~~~ 210 (342)
.+ +....++.+..+|............... -.+...+++.++|+.+++ +.-+
T Consensus 186 ~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp EEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred eEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 44 4444446677788654211111111110 125688999999975444 4443
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.96 E-value=1.7 Score=37.90 Aligned_cols=150 Identities=7% Similarity=0.070 Sum_probs=91.5
Q ss_pred EEEEEcCCCCeEEEEe-CCCcEEEEECCCceeee-eeec-----C--CceEEEEE---eCCCCeEEEec-----------
Q 019384 23 SNLRFSNHSDHLLVSS-WDKSVRLYDASANVLRG-EFMH-----G--GPVLDCCF---HDDSSGFSASA----------- 79 (342)
Q Consensus 23 ~~l~fs~~~~~l~s~s-~Dgti~vwd~~~~~~~~-~~~h-----~--~~V~~~~~---~~~~~~~s~s~----------- 79 (342)
-+++|++...+|..++ +.++|..||...+.... .+.. . ..+.++.| .++++++.+..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4678987555555555 89999999998553222 2211 1 13578888 35666655433
Q ss_pred ---CCcEEEEEec---cCcee---ecccC----------C-cceeEEEEeCCCCEEEEeeCC-CcEEEEcCCCCCCccee
Q 019384 80 ---DHTVRRLVFS---HGKED---ILGKH----------D-APVRCIEYSYAAGQVITGSWD-KSLKCWDPRGASGQERT 138 (342)
Q Consensus 80 ---D~~i~~w~~~---~~~~~---~~~~h----------~-~~V~~~~~~~~~~~l~sgs~D-~~I~iWd~~~~~~~~~~ 138 (342)
+..+..+|+. +++.. -+... . .....++..++|+.-++++.- +.|...+.... . ..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~--~~ 172 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T--VS 172 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C--EE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E--Ee
Confidence 4568888988 55532 11111 1 247789999999888888888 87777776421 1 11
Q ss_pred eee-ecC-CC----CcEEEEeccCCeEEEEEcCCeEEEEeCCC
Q 019384 139 LVG-TYP-QP----ERVYSLSLVGNRLVVATAGRHVNVYDLRN 175 (342)
Q Consensus 139 ~~~-~~~-~~----~~v~~~s~~~~~~~~~s~d~~v~iwd~~~ 175 (342)
.+. ... .. -.-+.+.++++.+++...++.+..+|+..
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 111 110 00 11234566677788776688899999874
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.81 E-value=2.9 Score=39.92 Aligned_cols=220 Identities=10% Similarity=0.010 Sum_probs=111.0
Q ss_pred CCCcEEEEECCCce--eeeeeecCCceEEEEEeC-CCCeEEE-ecCCcEEEEEeccCc--eeecccCCcceeEEEEeCCC
Q 019384 39 WDKSVRLYDASANV--LRGEFMHGGPVLDCCFHD-DSSGFSA-SADHTVRRLVFSHGK--EDILGKHDAPVRCIEYSYAA 112 (342)
Q Consensus 39 ~Dgti~vwd~~~~~--~~~~~~h~~~V~~~~~~~-~~~~~s~-s~D~~i~~w~~~~~~--~~~~~~h~~~V~~~~~~~~~ 112 (342)
..+.|++.|+.... .......-+.+.+++|.+ ++.++-+ ...+.|..+++.... ...+..--.....+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 46678888887542 222223345677899985 5555533 345678778776543 22233323567899999866
Q ss_pred CEE-EEeeCCCcEEEEcCCCCCCcceeee-eecCCCCcEEEEeccCCeEEEEEc--CCeEEEEeCCCCCCcccccccccc
Q 019384 113 GQV-ITGSWDKSLKCWDPRGASGQERTLV-GTYPQPERVYSLSLVGNRLVVATA--GRHVNVYDLRNMSQPEQRRESSLK 188 (342)
Q Consensus 113 ~~l-~sgs~D~~I~iWd~~~~~~~~~~~~-~~~~~~~~v~~~s~~~~~~~~~s~--d~~v~iwd~~~~~~~~~~~~~~~~ 188 (342)
+.| .+-...+.|.+.+++.... .... .....+. -+.++.....+..... ...|...++...... ......+
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~--~~l~~~~l~~P~-~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~-~l~~~~~- 170 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLR--KVLFWQELDQPR-AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-IIINSEI- 170 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC--EEEECSSCSCCC-CEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSSC-
T ss_pred CEEEEEeCCCCEEEEEECCCCCE--EEEEeCCCCCCc-eEEEecCCCeEEEeccCCCCEEEEEECCCCceE-EEEeCCC-
Confidence 655 4556678999999864221 1222 1122222 2345544444444432 245666666532111 1111111
Q ss_pred eeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE
Q 019384 189 YQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV 267 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I 267 (342)
...+.+++.++++.+..+. ..+. |+.+|..... .+.. +... ..+ ...|++..+ ..+++-...+.|
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~~~--I~~~~~dG~~-~~~~-~~~~--------~~~-P~gi~~~~~-~ly~td~~~~~V 236 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKLNF--IHKSNLDGTN-RQAV-VKGS--------LPH-PFALTLFED-ILYWTDWSTHSI 236 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTCC--EEEESSSCCE-EC-------------------CCCEEESSS-EEEEECTTTCSE
T ss_pred CCCcEEEEEccCCEEEEEeCCCCe--EEEecCCCCc-cEEE-EeCC--------CCC-ceEEEEeCC-EEEEecCCCCEE
Confidence 2467788888766555553 3333 4456653221 1111 1100 011 235677655 566676777889
Q ss_pred EEEeCCCcee
Q 019384 268 NVWDGNNKKR 277 (342)
Q Consensus 268 ~iWd~~~~~~ 277 (342)
...|..+++.
T Consensus 237 ~~~d~~tg~~ 246 (619)
T 3s94_A 237 LACNKYTGEG 246 (619)
T ss_dssp EEEESSSCCC
T ss_pred EEEECCCCcc
Confidence 9888766543
No 301
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.58 E-value=1.9 Score=36.63 Aligned_cols=78 Identities=14% Similarity=0.113 Sum_probs=44.7
Q ss_pred CCCeEEEecCC-----CeEEEEeCCCce--eeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 254 IYGTFATGGCD-----GFVNVWDGNNKK--RLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 254 ~~~~l~sgs~D-----g~I~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
++.+++.|+.+ ..+.+||.++.+ .+..+...... .++ ..-++++++.|+.... ...+.+.+|+.+
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~-~~~~~~i~v~GG~~~~------~~~~~v~~yd~~ 275 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AGV-CAVNGLLYVVGGDDGS------CNLASVEYYNPT 275 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEE-EEETTEEEEECCBCSS------SBCCCEEEEETT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-CeE-EEECCEEEEECCcCCC------cccccEEEEcCC
Confidence 56777888764 368999988653 22222211111 122 2237787777765431 123568899888
Q ss_pred CCccccCCCCCCC
Q 019384 327 EIEVKPKPKAYPN 339 (342)
Q Consensus 327 ~~~~~~~~~~~~~ 339 (342)
...|..-+...|.
T Consensus 276 ~~~W~~~~~~~~~ 288 (302)
T 2xn4_A 276 TDKWTVVSSCMST 288 (302)
T ss_dssp TTEEEECSSCCSS
T ss_pred CCeEEECCcccCc
Confidence 7777765533343
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.54 E-value=2.3 Score=37.47 Aligned_cols=236 Identities=8% Similarity=-0.031 Sum_probs=112.9
Q ss_pred CceEEEEEeCCCCeEEEecCCcEEEEEeccCceeec------ccCCcceeEEEEeCC---CCEEEEeeC----C----Cc
Q 019384 61 GPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDIL------GKHDAPVRCIEYSYA---AGQVITGSW----D----KS 123 (342)
Q Consensus 61 ~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~------~~h~~~V~~~~~~~~---~~~l~sgs~----D----~~ 123 (342)
....+++|.+++.++.+..++.|++++. .+. ..+ .........++++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3567889988888888887888887753 333 211 112345788999997 555544332 3 56
Q ss_pred EEEEcCCCCCCc---ceeeeeec----CCCCcEEEEeccCCeEEEEEcC--------------CeEEEEeCCCCCCcc--
Q 019384 124 LKCWDPRGASGQ---ERTLVGTY----PQPERVYSLSLVGNRLVVATAG--------------RHVNVYDLRNMSQPE-- 180 (342)
Q Consensus 124 I~iWd~~~~~~~---~~~~~~~~----~~~~~v~~~s~~~~~~~~~s~d--------------~~v~iwd~~~~~~~~-- 180 (342)
|..|+....... ....+... .+...-+.+..++...+ +..+ +.|..+|... +.+.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyv-t~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~n 184 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYI-TTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADN 184 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEE-ECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEE-EECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCC
Confidence 777776532100 11111111 12223345666665333 3222 3455555432 1100
Q ss_pred -----cccccccceeeEEEEEee-CCceEEEEccCCe-EEEEEeechhhhhcccceee-e-E--EecCCC---C-ceeee
Q 019384 181 -----QRRESSLKYQTRCVRCYP-NGTGYALSSVEGR-VAMEFFDLSEASQAKKYAFK-C-H--RKSEAG---R-DIVYP 245 (342)
Q Consensus 181 -----~~~~~~~~~~~~~v~~~~-~~~~~~~~s~~~~-~~i~~~d~~~~~~~~~~~~~-~-h--~~~~~~---~-~~~~~ 245 (342)
......+ .....+++.| ++..+++-..... -.+.+... .. ..-|... . . ...... . .....
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~--G~-nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILK--GG-NYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECT--TC-BCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecC--CC-cCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 0000011 1244677888 4554433322211 11111211 00 0000000 0 0 000000 0 00113
Q ss_pred eeEEEEc-------CCCCeEEEecCCCeEEEEeCCCc-eee--ec-cCCCCcceEEEEECCCCCEEEEEE
Q 019384 246 VNAIAFH-------PIYGTFATGGCDGFVNVWDGNNK-KRL--YQ-YSKYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 246 v~~v~~s-------p~~~~l~sgs~Dg~I~iWd~~~~-~~~--~~-~~~~~~~V~~v~~spdg~~las~s 304 (342)
...++|. .+|.++++.-..+.|...+.+.. +.. .. +.+...++.++++.|||.++++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 5667773 45667777777778888887743 221 22 223345789999999998777654
No 303
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.22 E-value=2.2 Score=36.07 Aligned_cols=71 Identities=15% Similarity=0.059 Sum_probs=39.2
Q ss_pred CCCeEEEecCC-----CeEEEEeCCCce--eeeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 254 IYGTFATGGCD-----GFVNVWDGNNKK--RLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 254 ~~~~l~sgs~D-----g~I~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
++.+++.|+.+ ..+.+||.++.+ .+..+........++ .-++++++.|+..... ..+.+.+++.+
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~------~~~~v~~yd~~ 277 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDGNS------LLSSIECYDPI 277 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSS------BEEEEEEEETT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcCcCCCc------ccccEEEEcCC
Confidence 56777888764 468999988754 222222211111222 2377877777643311 12357778776
Q ss_pred CCcccc
Q 019384 327 EIEVKP 332 (342)
Q Consensus 327 ~~~~~~ 332 (342)
...|+.
T Consensus 278 ~~~W~~ 283 (301)
T 2vpj_A 278 IDSWEV 283 (301)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 666654
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.05 E-value=4.3 Score=38.75 Aligned_cols=205 Identities=11% Similarity=0.077 Sum_probs=97.5
Q ss_pred ecCCcEEEEEeccCc--eeecccCCcceeEEEEeCCCCEEE-EeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec
Q 019384 78 SADHTVRRLVFSHGK--EDILGKHDAPVRCIEYSYAAGQVI-TGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL 154 (342)
Q Consensus 78 s~D~~i~~w~~~~~~--~~~~~~h~~~V~~~~~~~~~~~l~-sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~ 154 (342)
.....|+..++.... ...+.........++|++.++.|+ +=...+.|..+++..... ....+........-+++++
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEET
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-eEEEEeCCCCCcCeEEEEe
Confidence 345667777776542 222333345578899998776665 444457898888764311 1111211101122344555
Q ss_pred cCCeEEEE-EcCCeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeE
Q 019384 155 VGNRLVVA-TAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 233 (342)
Q Consensus 155 ~~~~~~~~-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h 233 (342)
.++.++.+ ...+.|.+.++........ ....+ .....+++.|.+..+........-.|+..+.... . .. .+..
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l-~~~~l-~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-~-~~-~l~~- 167 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVL-FWQEL-DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-S-RF-IIIN- 167 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEE-ECSSC-SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-S-CE-EEEC-
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEE-EeCCC-CCCceEEEecCCCeEEEeccCCCCEEEEEECCCC-c-eE-EEEe-
Confidence 44555444 5557899999865322111 11111 2356777888755555544322223333443211 1 11 1100
Q ss_pred EecCCCCceeeeeeEEEEcCCCCe-EEEecCCCeEEEEeCCCceeeeccCCCCcceEEEEECCC
Q 019384 234 RKSEAGRDIVYPVNAIAFHPIYGT-FATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRD 296 (342)
Q Consensus 234 ~~~~~~~~~~~~v~~v~~sp~~~~-l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~~spd 296 (342)
......+.++++++++. +++=...+.|...|.+.........+....-.+|++..|
T Consensus 168 -------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~ 224 (619)
T 3s94_A 168 -------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED 224 (619)
T ss_dssp -------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS
T ss_pred -------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC
Confidence 00113578999987555 455566778999988754332222211222356777666
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.38 E-value=3.9 Score=36.05 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=40.4
Q ss_pred eeEEEEcCCCCeEE-EecCCCeEEEEeCCC-cee--eeccCCCCcceEEEEECC-CCCEEEEEE
Q 019384 246 VNAIAFHPIYGTFA-TGGCDGFVNVWDGNN-KKR--LYQYSKYPTSIAALSFSR-DGRLLAVAS 304 (342)
Q Consensus 246 v~~v~~sp~~~~l~-sgs~Dg~I~iWd~~~-~~~--~~~~~~~~~~V~~v~~sp-dg~~las~s 304 (342)
.+.++|+||++.|. +-+..+.|+.|++.. ++. .+.+ ......-.+++.+ +|.+.+++.
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 57899999998664 455678999999763 322 1223 2245678899999 599877554
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.32 E-value=4.5 Score=36.58 Aligned_cols=102 Identities=9% Similarity=0.110 Sum_probs=67.9
Q ss_pred CCCCeEEEEeCCCcEEEEECCCceeeeeeec-----CCceEEEEEeCCCCeEEEecCCcEEEEEeccCc---e-------
Q 019384 29 NHSDHLLVSSWDKSVRLYDASANVLRGEFMH-----GGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK---E------- 93 (342)
Q Consensus 29 ~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h-----~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~---~------- 93 (342)
.++..|+.+ .++.||.=++..+.-...... -+.|..+..++++.+++-..+..|.+..+..+. .
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 345555433 457777777763221111111 125677888999999988889999999887332 1
Q ss_pred ---eec--cc----CCcceeEEEEeCC---CCEEEEeeCCCcEEEEcCCC
Q 019384 94 ---DIL--GK----HDAPVRCIEYSYA---AGQVITGSWDKSLKCWDPRG 131 (342)
Q Consensus 94 ---~~~--~~----h~~~V~~~~~~~~---~~~l~sgs~D~~I~iWd~~~ 131 (342)
+.+ .. ...+|..+.|+|- +..|++-..|++||+||+..
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 011 11 2467999999994 45788889999999999975
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.16 E-value=3.5 Score=34.84 Aligned_cols=228 Identities=14% Similarity=0.108 Sum_probs=100.4
Q ss_pred CCCeEEEEe-CC-----CcEEEEECCCceeeeeeecCCc--eEEEEEeCCCCeEEEecC-----CcEEEEEeccCc---e
Q 019384 30 HSDHLLVSS-WD-----KSVRLYDASANVLRGEFMHGGP--VLDCCFHDDSSGFSASAD-----HTVRRLVFSHGK---E 93 (342)
Q Consensus 30 ~~~~l~s~s-~D-----gti~vwd~~~~~~~~~~~h~~~--V~~~~~~~~~~~~s~s~D-----~~i~~w~~~~~~---~ 93 (342)
++..++.|+ .+ ..+.+||..+.+......-..+ -.+++...+...+.|+.+ ..+..+|..+.. .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445566666 33 4788899877654332111111 112222233333455544 357788877665 3
Q ss_pred eeccc---CCcceeEEEEeCCCCEEEEeeCCC-----cEEEEcCCCCCCcceeeeeecCCCC-cEEEEeccCCeEEEEEc
Q 019384 94 DILGK---HDAPVRCIEYSYAAGQVITGSWDK-----SLKCWDPRGASGQERTLVGTYPQPE-RVYSLSLVGNRLVVATA 164 (342)
Q Consensus 94 ~~~~~---h~~~V~~~~~~~~~~~l~sgs~D~-----~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~s~~~~~~~~~s~ 164 (342)
..+.. ....- +++.. ++..++.|+.++ .+.++|+.+..= ..+....... .......++..++.++.
T Consensus 94 ~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 94 YSVAPMNVRRGLA-GATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQW---SMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp EEECCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEE---EEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred EECCCCCCCccce-eEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeE---EECCCCCCCcccceEEEECCEEEEECCC
Confidence 32211 11111 12222 566667776543 577888764321 1111111111 11122234445555554
Q ss_pred C-----CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCe---EEEEEeechhhhhcccceeeeEEec
Q 019384 165 G-----RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR---VAMEFFDLSEASQAKKYAFKCHRKS 236 (342)
Q Consensus 165 d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~---~~i~~~d~~~~~~~~~~~~~~h~~~ 236 (342)
+ ..+..||..+..=..............++ .-++..++++..++. ..++.||.........-.+..
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---- 242 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA--LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTT---- 242 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSS----
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEE--EECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCC----
Confidence 3 35888898764211100000001111222 235566666655431 235668875432111100000
Q ss_pred CCCCceeeeeeEEEEcCCCCeEEEecCC-----CeEEEEeCCCc
Q 019384 237 EAGRDIVYPVNAIAFHPIYGTFATGGCD-----GFVNVWDGNNK 275 (342)
Q Consensus 237 ~~~~~~~~~v~~v~~sp~~~~l~sgs~D-----g~I~iWd~~~~ 275 (342)
.. ....++.+ ++..++.|+.+ ..|.+||.++.
T Consensus 243 --~r---~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 243 --PR---CYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp --CC---BSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred --cc---cceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 00 01112222 56777777765 36788887764
No 308
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.09 E-value=3.7 Score=34.95 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=41.2
Q ss_pred CCCeEEEecCC-----CeEEEEeCCCcee--eeccCCCCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEcc
Q 019384 254 IYGTFATGGCD-----GFVNVWDGNNKKR--LYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVN 326 (342)
Q Consensus 254 ~~~~l~sgs~D-----g~I~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~ 326 (342)
++.+++.|+.+ ..+.+||.++.+= +..+...... .+++. -++++++.|+... ....+.+.+++.+
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~------~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA-LGITV-HQGRIYVLGGYDG------HTFLDSVECYDPD 286 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCS------SCBCCEEEEEETT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc-eEEEE-ECCEEEEEcCcCC------CcccceEEEEcCC
Confidence 56777888765 4699999887532 2222211111 22222 3678777776433 1223478888887
Q ss_pred CCccccC
Q 019384 327 EIEVKPK 333 (342)
Q Consensus 327 ~~~~~~~ 333 (342)
...|+.-
T Consensus 287 ~~~W~~~ 293 (308)
T 1zgk_A 287 TDTWSEV 293 (308)
T ss_dssp TTEEEEE
T ss_pred CCEEeec
Confidence 6666544
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.04 E-value=3.7 Score=34.81 Aligned_cols=98 Identities=9% Similarity=0.050 Sum_probs=48.4
Q ss_pred CeEEEEeCC--CcEEEEECCCceeeeeeecCCc--eEEEEEeCCCCeEEEecC----CcEEEEEeccCceeeccc---CC
Q 019384 32 DHLLVSSWD--KSVRLYDASANVLRGEFMHGGP--VLDCCFHDDSSGFSASAD----HTVRRLVFSHGKEDILGK---HD 100 (342)
Q Consensus 32 ~~l~s~s~D--gti~vwd~~~~~~~~~~~h~~~--V~~~~~~~~~~~~s~s~D----~~i~~w~~~~~~~~~~~~---h~ 100 (342)
..++.|+.+ ..+.+||..+.+......-..+ -.+++...+...+.|+.+ ..+..+|..+.....+.. ..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 345566653 6788999887654332110000 012222233333455544 456677777665332211 11
Q ss_pred cceeEEEEeCCCCEEEEeeCC------CcEEEEcCCC
Q 019384 101 APVRCIEYSYAAGQVITGSWD------KSLKCWDPRG 131 (342)
Q Consensus 101 ~~V~~~~~~~~~~~l~sgs~D------~~I~iWd~~~ 131 (342)
..-.++.+ ++..++.|+.+ ..+.+||+.+
T Consensus 93 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 93 DSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp BSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred cceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 11112222 56666777765 4578888764
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.97 E-value=3.8 Score=34.74 Aligned_cols=226 Identities=13% Similarity=0.084 Sum_probs=101.7
Q ss_pred CcEEEEEeccCceeeccc---CCcceeEEEEeCCCCEEEEeeCC----CcEEEEcCCCCCCcceeeeeecCCCC-cEEEE
Q 019384 81 HTVRRLVFSHGKEDILGK---HDAPVRCIEYSYAAGQVITGSWD----KSLKCWDPRGASGQERTLVGTYPQPE-RVYSL 152 (342)
Q Consensus 81 ~~i~~w~~~~~~~~~~~~---h~~~V~~~~~~~~~~~l~sgs~D----~~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~ 152 (342)
..+..+|..+.+...+.. ....-.++. .++..++.|+.+ ..+.++|+.+..= ..+....... .....
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~~~~ 98 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSW---YSKLGPPTPRDSLAAC 98 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEE---EEEECCSSCCBSCEEE
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeE---EECCCCCccccceeEE
Confidence 467777777665332211 111111222 255666777765 5677888764321 1111111111 11122
Q ss_pred eccCCeEEEEEcC------CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCC-------eEEEEEeec
Q 019384 153 SLVGNRLVVATAG------RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEG-------RVAMEFFDL 219 (342)
Q Consensus 153 s~~~~~~~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~-------~~~i~~~d~ 219 (342)
..++..++.++.+ ..+.+||..+..=...............+ .-++..++.+..++ ...++.||.
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV--EANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE--EECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 3344455555544 35888888764211000000001111222 23555566664321 223566777
Q ss_pred hhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCC-----CeEEEEeCCCce--eeeccCCCCcceEEEE
Q 019384 220 SEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCD-----GFVNVWDGNNKK--RLYQYSKYPTSIAALS 292 (342)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~D-----g~I~iWd~~~~~--~~~~~~~~~~~V~~v~ 292 (342)
........-.+.. .. ..-.++.+ ++.+++.|+.+ ..+.+||..+.+ .+..+........++.
T Consensus 177 ~~~~W~~~~~~p~------~r---~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 177 ATETWTELCPMIE------AR---KNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp TTTEEEEECCCSS------CC---BSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred CCCeEEECCCccc------hh---hcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 5432111100000 00 00112222 56777777754 368899988653 2222222212223333
Q ss_pred ECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCCcccc
Q 019384 293 FSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEIEVKP 332 (342)
Q Consensus 293 ~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (342)
+ ++++++.|+.+.. ...+.+.+|+.+...|+.
T Consensus 246 ~--~~~i~v~GG~~~~------~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 246 V--GSIVYVLAGFQGV------GRLGHILEYNTETDKWVA 277 (306)
T ss_dssp E--TTEEEEEECBCSS------SBCCEEEEEETTTTEEEE
T ss_pred E--CCEEEEEeCcCCC------eeeeeEEEEcCCCCeEEe
Confidence 3 7787777765431 123468888887666654
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.50 E-value=11 Score=38.92 Aligned_cols=110 Identities=13% Similarity=0.159 Sum_probs=58.3
Q ss_pred ceEEEEEeCCCCeEEEecCCcEEEEEeccCceeec--ccCCcceeEEEEeCC------CCEEEEeeC-CCcEEEEcCCCC
Q 019384 62 PVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDIL--GKHDAPVRCIEYSYA------AGQVITGSW-DKSLKCWDPRGA 132 (342)
Q Consensus 62 ~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~--~~h~~~V~~~~~~~~------~~~l~sgs~-D~~I~iWd~~~~ 132 (342)
.|..++..+ .+++.++ ++.+.++.++.+..... ..-...|.|+++.+. .+.++.|.+ |++++|+.+...
T Consensus 515 ~I~~As~n~-~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 515 NISVASCNS-SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCCEEEECS-SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEEeCC-CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 455555433 3444444 56677776665432111 112457999998763 357888987 999999998642
Q ss_pred CCcceeeeeecCCCCcEEEEeccC-CeEEEEEcCCeEEEEeC
Q 019384 133 SGQERTLVGTYPQPERVYSLSLVG-NRLVVATAGRHVNVYDL 173 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~v~~~s~~~-~~~~~~s~d~~v~iwd~ 173 (342)
.......+.....+..+.-..+.+ -++..+..||.+..+.+
T Consensus 593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 221111111100111111112222 25777888888665544
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.97 E-value=1.2 Score=36.56 Aligned_cols=101 Identities=6% Similarity=-0.007 Sum_probs=59.4
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce------eeeeee---cCCceEEEEEeCCCCeEEEecCCcEEEEEecc
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANV------LRGEFM---HGGPVLDCCFHDDSSGFSASADHTVRRLVFSH 90 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~------~~~~~~---h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~ 90 (342)
+.+..++|+|+|.+.+. .+|.+.-.+..+.. .-..++ -++ -.++.|.+++.++.. .|+.|..++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 47779999999987666 66654444443311 111111 111 346666678877766 779887776543
Q ss_pred Ccee-------ecccCC-cceeEEEEeCCCCEEEEeeCCCcEEE
Q 019384 91 GKED-------ILGKHD-APVRCIEYSYAAGQVITGSWDKSLKC 126 (342)
Q Consensus 91 ~~~~-------~~~~h~-~~V~~~~~~~~~~~l~sgs~D~~I~i 126 (342)
.... ++..+. ..+..|.|.|+|.+-+. . |+.+.-
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav-~-dg~lyr 158 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV-H-GQQFYK 158 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE-E-TTEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEE-e-CCcEEe
Confidence 3211 121111 46799999999865544 4 777543
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.66 E-value=0.56 Score=38.43 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=58.0
Q ss_pred eEEEEEeeCCceEEEEccCCeEEEEEeechhhhhccccee-eeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEE
Q 019384 191 TRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAF-KCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNV 269 (342)
Q Consensus 191 ~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~-~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~i 269 (342)
+..++++|++...++ .++. ++-.+..+.. ...|.- ..+... .+.. ...++.|.|+|.++++ .||.|+-
T Consensus 43 ~~~laf~P~G~LYaV--~~G~--Ly~~~~~t~~-~~~W~~s~t~IG~-~Gw~---~F~a~~fD~~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDK--IYKGTPPTHD-NDNWMGRAKKIGN-GGWN---QFQFLFFDPNGYLYAV--SKDKLYK 111 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTE--EEEESCCCST-TCCHHHHCEEEEC-SCGG---GCSEEEECTTSCEEEE--ETTEEEE
T ss_pred ceeEEECCCccEEEE--eCCe--EEEECCCCCC-cccccccccEecc-cccc---cceEEEECCCCCEEEe--CCCEEEE
Confidence 457899998887666 4453 3344442211 111111 111100 0000 1468899999998888 6699988
Q ss_pred EeCCCc--eee-e---cc-CCCCcceEEEEECCCCCEEEEE
Q 019384 270 WDGNNK--KRL-Y---QY-SKYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 270 Wd~~~~--~~~-~---~~-~~~~~~V~~v~~spdg~~las~ 303 (342)
++.-+. ... . .+ .+-=..+..|.|.|||.+.|+.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 875321 111 0 00 0011467999999999999888
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.31 E-value=16 Score=38.42 Aligned_cols=105 Identities=7% Similarity=0.049 Sum_probs=64.1
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc--eeecccC---
Q 019384 25 LRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK--EDILGKH--- 99 (342)
Q Consensus 25 l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~--~~~~~~h--- 99 (342)
.-.+|..+.||--. ..++.|||+.+...........+|.-..|..+..+.. -.+..|..|++.... ..++..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~l-VT~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL-VTDNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEE-EcCCeEEEeccCCCCccHHHHhcchhc
Confidence 33456666666543 7899999997654444444456788888976655432 235678899885432 2344444
Q ss_pred -CcceeEEEEeCCCCEEEE-e------eCCCcEEEEcCCC
Q 019384 100 -DAPVRCIEYSYAAGQVIT-G------SWDKSLKCWDPRG 131 (342)
Q Consensus 100 -~~~V~~~~~~~~~~~l~s-g------s~D~~I~iWd~~~ 131 (342)
..+|..-..+++.+.++- | .-.|.+.++..+.
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc
Confidence 345666666777776542 2 2346788887653
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.29 E-value=8.2 Score=34.92 Aligned_cols=143 Identities=18% Similarity=0.175 Sum_probs=76.8
Q ss_pred EeccCCeEEEEEcCCeEEEEeCCCCCCcccccccc--cce-eeEEEEEeeCCceEEEEccCCeEEEEEeechhhhh-cc-
Q 019384 152 LSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESS--LKY-QTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQ-AK- 226 (342)
Q Consensus 152 ~s~~~~~~~~~s~d~~v~iwd~~~~~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~-~~- 226 (342)
++.++..+++ ..++.||.-++.... ..+....+ +.+ .+..+..+|+|..+++.+.. .+. +..+..... ..
T Consensus 28 ~~~n~t~i~~-a~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~--Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 28 SSQNGTRIVF-IQDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIF--VMEVPWGYSNVED 102 (452)
T ss_dssp EETTTTEEEE-EETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEE--EEECCTTCSCCCC
T ss_pred EEcCCCEEEE-EECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecCC-eEE--EEEecCccccCcc
Confidence 4444555443 445778877776432 22222111 223 45567889999988877544 333 344431110 00
Q ss_pred -----cceeeeEEecCCCCceeeeeeEEEEcCCC---CeEEEecCCCeEEEEeCCCce--eeecc---------CCCCcc
Q 019384 227 -----KYAFKCHRKSEAGRDIVYPVNAIAFHPIY---GTFATGGCDGFVNVWDGNNKK--RLYQY---------SKYPTS 287 (342)
Q Consensus 227 -----~~~~~~h~~~~~~~~~~~~v~~v~~sp~~---~~l~sgs~Dg~I~iWd~~~~~--~~~~~---------~~~~~~ 287 (342)
....+...-.........+|..+.|||-+ ..|++=..|++||+||+.... .. .+ ......
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVND 181 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCC
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccce
Confidence 00000000000000012368999999974 578888899999999987521 11 12 122357
Q ss_pred eEEEEECCCCCEE
Q 019384 288 IAALSFSRDGRLL 300 (342)
Q Consensus 288 V~~v~~spdg~~l 300 (342)
|.+++|+++|-.|
T Consensus 182 v~S~~Fg~~~lTL 194 (452)
T 3pbp_A 182 ITDLEFSKDGLTL 194 (452)
T ss_dssp EEEEEECTTSSCE
T ss_pred EEEEEEcCCCcEE
Confidence 8999999987633
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.87 E-value=6.8 Score=33.24 Aligned_cols=227 Identities=12% Similarity=0.044 Sum_probs=98.1
Q ss_pred CCCeEEEEeCC----CcEEEEECCCceeeeeeecCCc--eEEEEEeCCCCe-EEEec----C-----CcEEEEEeccCce
Q 019384 30 HSDHLLVSSWD----KSVRLYDASANVLRGEFMHGGP--VLDCCFHDDSSG-FSASA----D-----HTVRRLVFSHGKE 93 (342)
Q Consensus 30 ~~~~l~s~s~D----gti~vwd~~~~~~~~~~~h~~~--V~~~~~~~~~~~-~s~s~----D-----~~i~~w~~~~~~~ 93 (342)
++..++.|+.+ ..+.+||..+.+......-..+ -.+++.. ++.+ +.|+. + ..+..+|..+...
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45566666642 4688999877654332110000 0122222 3344 34444 2 3567777776653
Q ss_pred eecc---cCCcceeEEEEeCCCCEEEEeeCC-----CcEEEEcCCCCCCcceeeeeecCCCC-cEEEEeccCCeEEEEEc
Q 019384 94 DILG---KHDAPVRCIEYSYAAGQVITGSWD-----KSLKCWDPRGASGQERTLVGTYPQPE-RVYSLSLVGNRLVVATA 164 (342)
Q Consensus 94 ~~~~---~h~~~V~~~~~~~~~~~l~sgs~D-----~~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~s~~~~~~~~~s~ 164 (342)
..+. .....-.++.+ +++.++.|+.+ ..+.+||+.+..= ..+....... .......++..++.++.
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W---~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW---HLVAPMLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE---EECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE---eECCCCCccccceEEEEECCEEEEEeCC
Confidence 3221 11111112222 56666666644 3577888764310 1111111111 11122234444555554
Q ss_pred C-----CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCe---EEEEEeechhhhhcccceeeeEEec
Q 019384 165 G-----RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR---VAMEFFDLSEASQAKKYAFKCHRKS 236 (342)
Q Consensus 165 d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~---~~i~~~d~~~~~~~~~~~~~~h~~~ 236 (342)
+ ..+.+||..+..=...............+. -++..+++++.++. ..++.||.....-.....+..
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---- 251 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH---- 251 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS----
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCC----
Confidence 3 358888886542110000000111112222 25666666654321 235678875432211111110
Q ss_pred CCCCceeeeeeEEEEcCCCCeEEEecCC-----CeEEEEeCCCc
Q 019384 237 EAGRDIVYPVNAIAFHPIYGTFATGGCD-----GFVNVWDGNNK 275 (342)
Q Consensus 237 ~~~~~~~~~v~~v~~sp~~~~l~sgs~D-----g~I~iWd~~~~ 275 (342)
.. ....++.+ ++++++.|+.+ ..+.+||.++.
T Consensus 252 --~r---~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 252 --RR---SALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp --CC---BSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred --Cc---cceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 00 00112222 56777777754 35777887754
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.49 E-value=12 Score=35.63 Aligned_cols=216 Identities=6% Similarity=-0.042 Sum_probs=116.9
Q ss_pred CCCcEEEEECCCceeeeee--ecCCceEEEEEeC-CCCeE-EEecCCcEEEEEeccCceee-cccCCcceeEEEEeCCCC
Q 019384 39 WDKSVRLYDASANVLRGEF--MHGGPVLDCCFHD-DSSGF-SASADHTVRRLVFSHGKEDI-LGKHDAPVRCIEYSYAAG 113 (342)
Q Consensus 39 ~Dgti~vwd~~~~~~~~~~--~h~~~V~~~~~~~-~~~~~-s~s~D~~i~~w~~~~~~~~~-~~~h~~~V~~~~~~~~~~ 113 (342)
..+.|+..|+.+....... ..-..+.+++|.+ ++.++ +-..++.|..++++...... +..-......+++.+.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 5677899998764322221 2234678999985 45555 44566788888876654332 222224567899988766
Q ss_pred EE-EEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEecc--CCeEEEEEc--CCeEEEEeCCCCCCcccccccccc
Q 019384 114 QV-ITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLV--GNRLVVATA--GRHVNVYDLRNMSQPEQRRESSLK 188 (342)
Q Consensus 114 ~l-~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~--~~~~~~~s~--d~~v~iwd~~~~~~~~~~~~~~~~ 188 (342)
.| .+-...+.|.+.+++... ...+.. ........+..+ ...+..... ...|...++........ ... -
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~---~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l--~~~-~ 165 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQH---RQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL--VPN-V 165 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTT---CEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE--ECS-C
T ss_pred EEEEEECCCCEEEEEecCCCc---EEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE--ECC-C
Confidence 66 455556789999886422 122211 111223344444 334443332 35677777754322111 111 1
Q ss_pred eeeEEEEEeeCCceEEEEc-cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeE
Q 019384 189 YQTRCVRCYPNGTGYALSS-VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFV 267 (342)
Q Consensus 189 ~~~~~v~~~~~~~~~~~~s-~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I 267 (342)
...+.+++.++++.+..+. ..+. |+.+|..... ++ .+.. . ..+| ..+++.. +..+++-...+.|
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~--I~~~d~dG~~--~~-v~~~--~------l~~P-~glav~~-~~ly~tD~~~~~I 230 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNL--IESSNMLGLN--RE-VIAD--D------LPHP-FGLTQYQ-DYIYWTDWSRRSI 230 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTE--EEEEETTSCS--CE-EEEE--C------CSCE-EEEEEET-TEEEEEETTTTEE
T ss_pred CCcceEEEccccCEEEEEECCCCE--EEEEcCCCCc--eE-Eeec--c------CCCc-eEEEEEC-CEEEEecCCCCEE
Confidence 2467888888766665554 4444 4556664321 11 1111 0 0112 3566655 5666777778899
Q ss_pred EEEeCCCce
Q 019384 268 NVWDGNNKK 276 (342)
Q Consensus 268 ~iWd~~~~~ 276 (342)
...|..+++
T Consensus 231 ~~~dk~tg~ 239 (628)
T 4a0p_A 231 ERANKTSGQ 239 (628)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCC
Confidence 988865543
No 318
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.38 E-value=10 Score=33.06 Aligned_cols=106 Identities=7% Similarity=0.048 Sum_probs=68.2
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc--eeecccCC-
Q 019384 24 NLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK--EDILGKHD- 100 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~--~~~~~~h~- 100 (342)
+.-.+|..+.||--. ..++.|||+.+...+........|.-..|..+..+.. -.+..+..|++.... .+.+..|.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~l-VT~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL-VTDNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEE-EESSEEEEEESSTTCCCEEEEECCGG
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEE-EcCCcEEEEcccCCCCCceeeecchh
Confidence 344577777777655 7899999998876555555567888999976655432 235678889886532 34444443
Q ss_pred ---cceeEEEEeCCCCEEEE-ee------CCCcEEEEcCCC
Q 019384 101 ---APVRCIEYSYAAGQVIT-GS------WDKSLKCWDPRG 131 (342)
Q Consensus 101 ---~~V~~~~~~~~~~~l~s-gs------~D~~I~iWd~~~ 131 (342)
.+|..-..+++.+.++- |- -.|.+.+|..+.
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc
Confidence 45666666777776532 21 225677887653
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=88.55 E-value=14 Score=33.60 Aligned_cols=21 Identities=24% Similarity=0.407 Sum_probs=15.7
Q ss_pred CCCcceEEEEECCCCCEEEEEE
Q 019384 283 KYPTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 283 ~~~~~V~~v~~spdg~~las~s 304 (342)
+|. ..+.++|.|+|++.++--
T Consensus 226 G~R-Np~gla~dp~G~L~~~d~ 246 (454)
T 1cru_A 226 GHR-NPQGLAFTPNGKLLQSEQ 246 (454)
T ss_dssp CCS-EEEEEEECTTSCEEEEEE
T ss_pred CCC-CcceEEECCCCCEEEEec
Confidence 554 468999999999776543
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.49 E-value=12 Score=32.71 Aligned_cols=57 Identities=11% Similarity=0.025 Sum_probs=34.5
Q ss_pred eeEEEEcCCCCeEEEecC-------------CCeEEEEeCCCce------------eeecc-CCCCcceEEEEECC-CCC
Q 019384 246 VNAIAFHPIYGTFATGGC-------------DGFVNVWDGNNKK------------RLYQY-SKYPTSIAALSFSR-DGR 298 (342)
Q Consensus 246 v~~v~~sp~~~~l~sgs~-------------Dg~I~iWd~~~~~------------~~~~~-~~~~~~V~~v~~sp-dg~ 298 (342)
-..++|.|||.++++-+. .|.|.-++.+..- ....+ .++. ..+.++|.| +|+
T Consensus 132 ~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~ 210 (353)
T 2g8s_A 132 GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNA 210 (353)
T ss_dssp CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTE
T ss_pred CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCC
Confidence 457999999976666433 2467666654310 11111 2443 468999999 777
Q ss_pred EEEEE
Q 019384 299 LLAVA 303 (342)
Q Consensus 299 ~las~ 303 (342)
++++=
T Consensus 211 l~~~d 215 (353)
T 2g8s_A 211 LWLNE 215 (353)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66653
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.25 E-value=13 Score=32.64 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=60.3
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee--e-----ecCCceEEEEEeCC----CCeEEE---ecCCcEEE
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE--F-----MHGGPVLDCCFHDD----SSGFSA---SADHTVRR 85 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~--~-----~h~~~V~~~~~~~~----~~~~s~---s~D~~i~~ 85 (342)
..-+.++|.|||+++++--..|+|++++..++..... . .-.+....++|+|+ +.++.. ..++.|..
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4668999999999888766689999998765442211 1 12456789999874 555432 23445555
Q ss_pred EEeccC-----c----eeecc------cCCcceeEEEEeCCCCEEEEee
Q 019384 86 LVFSHG-----K----EDILG------KHDAPVRCIEYSYAAGQVITGS 119 (342)
Q Consensus 86 w~~~~~-----~----~~~~~------~h~~~V~~~~~~~~~~~l~sgs 119 (342)
+.+... . +.++. .| .-..|+|.||+.+.++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECB
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEEC
Confidence 555431 1 11111 23 235688899887666654
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.25 E-value=11 Score=31.78 Aligned_cols=226 Identities=14% Similarity=0.075 Sum_probs=98.0
Q ss_pred CeEEEEeCC----CcEEEEECCCceeeeeeecCCc-e-EEEEEeCCCCe-EEEecC-----CcEEEEEeccCceeeccc-
Q 019384 32 DHLLVSSWD----KSVRLYDASANVLRGEFMHGGP-V-LDCCFHDDSSG-FSASAD-----HTVRRLVFSHGKEDILGK- 98 (342)
Q Consensus 32 ~~l~s~s~D----gti~vwd~~~~~~~~~~~h~~~-V-~~~~~~~~~~~-~s~s~D-----~~i~~w~~~~~~~~~~~~- 98 (342)
..++.|+.+ ..+.+||..+...........+ . .+++.. ++.+ +.|+.+ ..+..+|..+.....+..
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 455566654 4678889877654332111111 1 122222 3444 455544 246777777665332211
Q ss_pred --CCcceeEEEEeCCCCEEEEeeCCC-----cEEEEcCCCCCCcceeeeeecCCCCc-EEEEeccCCeEEEEEcC-----
Q 019384 99 --HDAPVRCIEYSYAAGQVITGSWDK-----SLKCWDPRGASGQERTLVGTYPQPER-VYSLSLVGNRLVVATAG----- 165 (342)
Q Consensus 99 --h~~~V~~~~~~~~~~~l~sgs~D~-----~I~iWd~~~~~~~~~~~~~~~~~~~~-v~~~s~~~~~~~~~s~d----- 165 (342)
....- +++.. ++..++.|+.++ .+.+||+.+..= ..+........ ......++..++.++.+
T Consensus 96 p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 96 RDRRSTL-GAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEW---FHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp SSCCBSC-EEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEE---EEECCCSSCCBSCEEEEETTEEEEECCEETTTTE
T ss_pred Cccccce-EEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeE---eecCCCCCcccCceEEEECCEEEEEeCCCCCCCc
Confidence 11111 12222 556667777653 466788764320 11111111111 11222344444444432
Q ss_pred --CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCe---EEEEEeechhhhhcccceeeeEEecCCCC
Q 019384 166 --RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR---VAMEFFDLSEASQAKKYAFKCHRKSEAGR 240 (342)
Q Consensus 166 --~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~---~~i~~~d~~~~~~~~~~~~~~h~~~~~~~ 240 (342)
..+.+||..+..=...............+ .-++..+++++.++. ..++.||.....-...-.+.. ..
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~------~r 242 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM------CR 242 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS------CC
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC------cc
Confidence 35788888764211000000001111222 235666667654431 235678875432111100000 00
Q ss_pred ceeeeeeEEEEcCCCCeEEEecCCC-----eEEEEeCCCce
Q 019384 241 DIVYPVNAIAFHPIYGTFATGGCDG-----FVNVWDGNNKK 276 (342)
Q Consensus 241 ~~~~~v~~v~~sp~~~~l~sgs~Dg-----~I~iWd~~~~~ 276 (342)
....++.+ ++..++.|+.++ .+.+||.++.+
T Consensus 243 ---~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 243 ---RNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp ---BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ---ccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 00112222 567777877654 48889887653
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.33 E-value=17 Score=33.09 Aligned_cols=106 Identities=7% Similarity=0.060 Sum_probs=67.8
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeeecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCc--eeecccCC-
Q 019384 24 NLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGK--EDILGKHD- 100 (342)
Q Consensus 24 ~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~--~~~~~~h~- 100 (342)
+.-.+|..+.||--. ..++.|||+.+............|.-..|..+..+. --.+..|..|++.... ..++..|.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~-lVT~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA-LVTDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEE-EECSSEEEEEESSSSCCCEEEEECCGG
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEE-EEcCCeeEEecccCCCCchhheecchh
Confidence 445577777777654 789999999886655555556678888887555443 2345678899986432 34444443
Q ss_pred ---cceeEEEEeCCCCEEEE-e--e----CCCcEEEEcCCC
Q 019384 101 ---APVRCIEYSYAAGQVIT-G--S----WDKSLKCWDPRG 131 (342)
Q Consensus 101 ---~~V~~~~~~~~~~~l~s-g--s----~D~~I~iWd~~~ 131 (342)
..|..-..+++.+.++- | . -.|.+.+|..+.
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc
Confidence 45666666777776542 2 1 236778887653
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=86.89 E-value=7.8 Score=35.36 Aligned_cols=101 Identities=11% Similarity=0.121 Sum_probs=59.2
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee--ee-------cCCceEEEEEeC----CCCeEEEec------
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE--FM-------HGGPVLDCCFHD----DSSGFSASA------ 79 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~--~~-------h~~~V~~~~~~~----~~~~~s~s~------ 79 (342)
-..-+.++|.|+|+++++-...+.|++++..++..... +. ..+....++|+| ++.++.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34668999999998887654445788887654432211 11 245678999987 555553332
Q ss_pred -------CCcEEEEEeccCc------eeecc----cCCcceeEEEEeCCCCEEEEee
Q 019384 80 -------DHTVRRLVFSHGK------EDILG----KHDAPVRCIEYSYAAGQVITGS 119 (342)
Q Consensus 80 -------D~~i~~w~~~~~~------~~~~~----~h~~~V~~~~~~~~~~~l~sgs 119 (342)
...|..+.+.... +.++. ........++|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 1245555543221 11221 1112367899999998766644
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.20 E-value=16 Score=31.58 Aligned_cols=91 Identities=11% Similarity=0.004 Sum_probs=42.4
Q ss_pred CCCeEEEEeCC-CcEEEEECCC--ceeeeeee-c-CCce-EEEEEeCCCCe-EEEec-C---------CcEEEEEeccCc
Q 019384 30 HSDHLLVSSWD-KSVRLYDASA--NVLRGEFM-H-GGPV-LDCCFHDDSSG-FSASA-D---------HTVRRLVFSHGK 92 (342)
Q Consensus 30 ~~~~l~s~s~D-gti~vwd~~~--~~~~~~~~-h-~~~V-~~~~~~~~~~~-~s~s~-D---------~~i~~w~~~~~~ 92 (342)
++..++.|+.+ ..+.+||... ........ . .... .+++... +.+ +.|+. + ..+..+|..+..
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 66666777654 5688888863 33222111 1 1111 1222233 344 34544 2 357778877766
Q ss_pred eeecccC--CcceeEEEEeCCCCEEEEeeCC
Q 019384 93 EDILGKH--DAPVRCIEYSYAAGQVITGSWD 121 (342)
Q Consensus 93 ~~~~~~h--~~~V~~~~~~~~~~~l~sgs~D 121 (342)
...+..- .......+...+++.++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred EEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 4332211 1111111112356666777765
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.28 E-value=18 Score=31.57 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=34.6
Q ss_pred eeEEEEcCCCCeEEEecC-------------CCeEEEEeCCCc---------eeeeccCCCCcceEEEEECCCCCEEEEE
Q 019384 246 VNAIAFHPIYGTFATGGC-------------DGFVNVWDGNNK---------KRLYQYSKYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 246 v~~v~~sp~~~~l~sgs~-------------Dg~I~iWd~~~~---------~~~~~~~~~~~~V~~v~~spdg~~las~ 303 (342)
-..|+|.|||.++++-+. -|.|.-.+.... ..+. ..+|.+ ...++|.|+|++.++=
T Consensus 142 g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 142 GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence 567999999987777432 345544454321 1111 135644 5699999999877653
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=84.53 E-value=18 Score=30.70 Aligned_cols=77 Identities=19% Similarity=0.220 Sum_probs=41.1
Q ss_pred CCCeEEEecCC-----CeEEEEeCCCce--eeeccCCCCcceEEEEECCCCCEEEEEEeccccC--CCC-CCCCCcEEEE
Q 019384 254 IYGTFATGGCD-----GFVNVWDGNNKK--RLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEE--GDK-PHEPDAIFVR 323 (342)
Q Consensus 254 ~~~~l~sgs~D-----g~I~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~--~~~-~~~~~~~~~~ 323 (342)
++..++.|+.+ ..+.+||.++.+ .+..+...... .++ ..-++++++.|+...... +.. ....+.+.++
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~-~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS-ISL-VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS-CEE-EEETTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc-eEE-EEECCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 56777777643 357789987653 22222221111 122 234678777777544221 111 2335678888
Q ss_pred EccCCcccc
Q 019384 324 SVNEIEVKP 332 (342)
Q Consensus 324 ~~~~~~~~~ 332 (342)
+.+...|..
T Consensus 284 d~~~~~W~~ 292 (318)
T 2woz_A 284 EDDKKEWAG 292 (318)
T ss_dssp ETTTTEEEE
T ss_pred eCCCCEehh
Confidence 887666654
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.04 E-value=20 Score=30.26 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=39.9
Q ss_pred CCCeEEEecCCC-----eEEEEeCCCce--eeeccCCCCcceEEEEECCCCCEEEEEEeccccC--CCC-CCCCCcEEEE
Q 019384 254 IYGTFATGGCDG-----FVNVWDGNNKK--RLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEE--GDK-PHEPDAIFVR 323 (342)
Q Consensus 254 ~~~~l~sgs~Dg-----~I~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~~~~~~--~~~-~~~~~~~~~~ 323 (342)
++.+++.|+.++ .+.+||.++.+ .+..+.........+. -++++++.|+...... +.. ....+.+.+|
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEe
Confidence 567777777554 58889988753 2222221111112222 3778888777643211 110 1122457777
Q ss_pred EccCCcccc
Q 019384 324 SVNEIEVKP 332 (342)
Q Consensus 324 ~~~~~~~~~ 332 (342)
+.+...|+.
T Consensus 274 d~~~~~W~~ 282 (315)
T 4asc_A 274 NEEEKKWEG 282 (315)
T ss_dssp ETTTTEEEE
T ss_pred cCCCChhhh
Confidence 776555543
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=83.03 E-value=23 Score=30.85 Aligned_cols=58 Identities=22% Similarity=0.146 Sum_probs=38.3
Q ss_pred eeEEEEcC-------CCCeEEEecCCCeEEEEeCCCceeee--c-cCCCCcceEEEEECCCCCEEEEE
Q 019384 246 VNAIAFHP-------IYGTFATGGCDGFVNVWDGNNKKRLY--Q-YSKYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 246 v~~v~~sp-------~~~~l~sgs~Dg~I~iWd~~~~~~~~--~-~~~~~~~V~~v~~spdg~~las~ 303 (342)
...++|.. +|.++++.-..+.|...+.+.++.+. . +.....++..+++.|||.++++.
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 45667753 46667776677788888776554332 1 22233578999999999977654
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.37 E-value=24 Score=30.71 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=57.6
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCce-eeeee----ecCCceEEEEEeCC----CCeEEEec----C----Cc
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANV-LRGEF----MHGGPVLDCCFHDD----SSGFSASA----D----HT 82 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~-~~~~~----~h~~~V~~~~~~~~----~~~~s~s~----D----~~ 82 (342)
..-+.++|.|+|++++ +..+|.|+++|.. +. ....+ .-.+....++|.++ +.++.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4678999999997555 4566999999743 33 11111 11346789999875 55654432 2 45
Q ss_pred EEEEEeccC------ceeecc------cCCcceeEEEEeCCCCEEEEe
Q 019384 83 VRRLVFSHG------KEDILG------KHDAPVRCIEYSYAAGQVITG 118 (342)
Q Consensus 83 i~~w~~~~~------~~~~~~------~h~~~V~~~~~~~~~~~l~sg 118 (342)
|..++.... ...++. .| .-..++|.||+.+.++-
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEEEEC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEEEEE
Confidence 666666543 111111 23 24579999999876664
No 331
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=82.33 E-value=24 Score=30.65 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=57.6
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee--e----ecCCceEEEEEeCC----CCeEEEec-C-----CcE
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE--F----MHGGPVLDCCFHDD----SSGFSASA-D-----HTV 83 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~--~----~h~~~V~~~~~~~~----~~~~s~s~-D-----~~i 83 (342)
..-+.++|.|+|+++++ ..+|.|++++ .+..... . .-.+....++|+++ +.++.+.. . ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45689999999986654 5669999998 3332111 1 11346789999876 55554432 2 556
Q ss_pred EEEEeccCc----eee---cc---cCCcceeEEEEeCCCCEEEEe
Q 019384 84 RRLVFSHGK----EDI---LG---KHDAPVRCIEYSYAAGQVITG 118 (342)
Q Consensus 84 ~~w~~~~~~----~~~---~~---~h~~~V~~~~~~~~~~~l~sg 118 (342)
..++..... ... +. +.......++|.||+.+.++-
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 677765431 111 11 111123589999999766664
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.28 E-value=48 Score=32.11 Aligned_cols=257 Identities=10% Similarity=0.006 Sum_probs=132.7
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee--eecCCceEEEEEeCCCCeEEEecCCcEEEEEeccCceeec
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE--FMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDIL 96 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~--~~h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~ 96 (342)
.+.|++|.-+++|..- -|..+| +..||-..-+.... ......|.++....++.+..++.+| +..+|..+......
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~ 97 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQP 97 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCC
T ss_pred cceEEEEEECCCCCEE-EEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECc
Confidence 6789999999888554 455777 44566432111100 0123457777766677776777655 66787765432111
Q ss_pred -ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeee--c-CCCCcEEEEecc-CCeEEEEEcCCeEEEE
Q 019384 97 -GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGT--Y-PQPERVYSLSLV-GNRLVVATAGRHVNVY 171 (342)
Q Consensus 97 -~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~--~-~~~~~v~~~s~~-~~~~~~~s~d~~v~iw 171 (342)
......|.++... ++ .|..++.+ .|..+|..+..- ..+.. . .....+.++..+ ...+.+++.+ .+..+
T Consensus 98 ~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~---~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~ 170 (758)
T 3ott_A 98 ETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKL---TSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRY 170 (758)
T ss_dssp SCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCE---EEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEE
T ss_pred ccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeE---EEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhC
Confidence 1122357776543 44 55555555 678888754221 11100 0 112345666655 3456667654 57778
Q ss_pred eCCCCCCccccccc--cc-ceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE
Q 019384 172 DLRNMSQPEQRRES--SL-KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA 248 (342)
Q Consensus 172 d~~~~~~~~~~~~~--~~-~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~ 248 (342)
|..+.......... .. ...+.++...+++..+.+++.++ +..+|...... .. +.. . ....|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G---l~~~~~~~~~~-~~--~~~-l-------~~~~i~~ 236 (758)
T 3ott_A 171 IPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY---LFQYFPSTGQI-KQ--TEA-F-------HNNSIKS 236 (758)
T ss_dssp ETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE---EEEEETTTTEE-EE--EEE-E-------EEEEEEE
T ss_pred ccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCC---CeEEcCCCCeE-Ee--ccC-C-------CCCeEEE
Confidence 87653211000000 00 11245555555556566666432 44566532211 11 110 0 0124788
Q ss_pred EEEcCCCCeEEEecCCCeEEEEeCCCceeeecc-------CCCCcceEEEEECCCCCEEE
Q 019384 249 IAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQY-------SKYPTSIAALSFSRDGRLLA 301 (342)
Q Consensus 249 v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~-------~~~~~~V~~v~~spdg~~la 301 (342)
+...++|. |..|.. +-+.+++..+++..... .-....|.++....+|.+-+
T Consensus 237 i~~d~~g~-lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 237 LALDGNGD-LLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp EEECTTCC-EEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred EEEcCCCC-EEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 88777665 444554 45888887664322110 01234689999888888544
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=76.98 E-value=50 Score=31.81 Aligned_cols=125 Identities=14% Similarity=0.167 Sum_probs=61.7
Q ss_pred eCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCC-CCeEEEecC--C-----CeEEE
Q 019384 198 PNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPI-YGTFATGGC--D-----GFVNV 269 (342)
Q Consensus 198 ~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~-~~~l~sgs~--D-----g~I~i 269 (342)
.++..++.|+.++...++.||.........-. .+ ..... .....++++..+ +..++.|+. + ..+.+
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~g--~~p~~---r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~ 572 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP-KD--EFFQN---SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAII 572 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCC-SS--GGGGS---CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEE
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccC-CC--CCCCc---ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEE
Confidence 36677777765443256778875432111100 00 00000 001233555555 667777775 2 36889
Q ss_pred EeCCCcee-----eeccCC---CCcceEEEEECCCCCEEEEEEeccccCCCCCCCCCcEEEEEccCCccc
Q 019384 270 WDGNNKKR-----LYQYSK---YPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIFVRSVNEIEVK 331 (342)
Q Consensus 270 Wd~~~~~~-----~~~~~~---~~~~V~~v~~spdg~~las~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (342)
||..+..- ...+.. ....-.+++...|+++++.|+..... .....+.+.+++.+...|.
T Consensus 573 yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 573 FKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSG---LFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSC---CCCTTTSEEEEETTTTEEE
T ss_pred EEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCC---CCCCCCeEEEEECCCCeEE
Confidence 99876551 111111 11111233333447877777643211 1133457888988877776
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=76.54 E-value=36 Score=29.59 Aligned_cols=25 Identities=4% Similarity=-0.015 Sum_probs=20.2
Q ss_pred cCCeEEEEEcCCeEEEEeCCCCCCc
Q 019384 155 VGNRLVVATAGRHVNVYDLRNMSQP 179 (342)
Q Consensus 155 ~~~~~~~~s~d~~v~iwd~~~~~~~ 179 (342)
.++.+++++.++.+...|+++++..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEE
Confidence 3457788999999999999988654
No 335
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=76.22 E-value=54 Score=31.15 Aligned_cols=275 Identities=7% Similarity=-0.018 Sum_probs=133.3
Q ss_pred CCCeEEEEEcCCCCeEEEEeC--CCcEEEEECCCceeeeeeecCCceEEEEEeC-CCCeEEE-ecCCcEEEEEeccCcee
Q 019384 19 SDGISNLRFSNHSDHLLVSSW--DKSVRLYDASANVLRGEFMHGGPVLDCCFHD-DSSGFSA-SADHTVRRLVFSHGKED 94 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~--Dgti~vwd~~~~~~~~~~~h~~~V~~~~~~~-~~~~~s~-s~D~~i~~w~~~~~~~~ 94 (342)
-..-..|+++|....|.-+.. .+.|...+.+..........-....++++.+ .+.++.+ +..+.|...+++.....
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 355689999985555544432 4566666666544333333345678899985 4555544 45567888887665444
Q ss_pred ecccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceee--------ee-ecC------C--------------
Q 019384 95 ILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTL--------VG-TYP------Q-------------- 145 (342)
Q Consensus 95 ~~~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~--------~~-~~~------~-------------- 145 (342)
.+.........+++.. +..+.|-...+.|...|..++....... +. .+. .
T Consensus 202 v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~ 280 (628)
T 4a0p_A 202 VIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCL 280 (628)
T ss_dssp EEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEE
T ss_pred EeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhh
Confidence 4433334455777764 3344454446778887764432111000 00 000 0
Q ss_pred --C-CcEEEEeccC-------------CeEEEEEcCCeEEEEeCCCCCCccccc-ccccceeeEEEEEeeCCceEEEE-c
Q 019384 146 --P-ERVYSLSLVG-------------NRLVVATAGRHVNVYDLRNMSQPEQRR-ESSLKYQTRCVRCYPNGTGYALS-S 207 (342)
Q Consensus 146 --~-~~v~~~s~~~-------------~~~~~~s~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~-s 207 (342)
+ ....+.+..+ +.++..+....|+-..+.......... ...+ .....+.+.+..+.+..+ .
T Consensus 281 ~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~-~~~~~ld~d~~~~~iy~sD~ 359 (628)
T 4a0p_A 281 AVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSL-RNVRAIDYDPLDKQLYWIDS 359 (628)
T ss_dssp EETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTC-SCEEEEEEETTTTEEEEEET
T ss_pred cCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhc-CCceEEEEecCCCeEEEEec
Confidence 0 0011111111 112333444556655554321110000 0111 234567777755554444 3
Q ss_pred cCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCC-eEEEecCCCeEEEEeCCCceeeeccCCCCc
Q 019384 208 VEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYG-TFATGGCDGFVNVWDGNNKKRLYQYSKYPT 286 (342)
Q Consensus 208 ~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~~~~~~~~~~~ 286 (342)
..+.+ +.++..... ... .+..... +......+..+|+...++ .+++-+..+.|.+.+.+.......+.....
T Consensus 360 ~~~~I--~r~~~~g~~-~~~-v~~~~~~---~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~ 432 (628)
T 4a0p_A 360 RQNMI--RKAQEDGSQ-GFT-VVVSSVP---SQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQD 432 (628)
T ss_dssp TTTEE--EEEETTSCS-CEE-EEC-----------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTC
T ss_pred CcceE--EEEEcCCCC-ceE-EEEcccc---cccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCC
Confidence 33433 233332111 000 0100000 000112367899988755 557878888999998864322112223345
Q ss_pred ceEEEEECC-CCCEEEE
Q 019384 287 SIAALSFSR-DGRLLAV 302 (342)
Q Consensus 287 ~V~~v~~sp-dg~~las 302 (342)
...+|++.| .|.++.+
T Consensus 433 ~Pr~iavdp~~g~ly~t 449 (628)
T 4a0p_A 433 RPRAVVVNPEKGYMYFT 449 (628)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred ceeeEEEecCCCeEEEe
Confidence 678999999 6665554
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.42 E-value=60 Score=31.25 Aligned_cols=186 Identities=11% Similarity=0.054 Sum_probs=80.5
Q ss_pred CCCEEEEeeCCC------cEEEEcCCCCCCcceeeeeecCCCC-cEEEEec-cCCeEEEEEcCC--eEEEEeCCCCCCcc
Q 019384 111 AAGQVITGSWDK------SLKCWDPRGASGQERTLVGTYPQPE-RVYSLSL-VGNRLVVATAGR--HVNVYDLRNMSQPE 180 (342)
Q Consensus 111 ~~~~l~sgs~D~------~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~s~-~~~~~~~~s~d~--~v~iwd~~~~~~~~ 180 (342)
++..++.|+.++ .+.+||+.+.. -..+.....+. ....... ++..++.|+.++ .+.+||..+..=..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~---W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTRE---WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTE---EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCc---EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence 566667776553 46778876421 01111111110 1112332 555666665544 68889987642110
Q ss_pred ccc---ccccceeeEEEEEeeC-CceEEEEccC--C---eEEEEEeechhhhh--cccceeeeEEecCCCCceeeeeeEE
Q 019384 181 QRR---ESSLKYQTRCVRCYPN-GTGYALSSVE--G---RVAMEFFDLSEASQ--AKKYAFKCHRKSEAGRDIVYPVNAI 249 (342)
Q Consensus 181 ~~~---~~~~~~~~~~v~~~~~-~~~~~~~s~~--~---~~~i~~~d~~~~~~--~~~~~~~~h~~~~~~~~~~~~v~~v 249 (342)
... ..........+.+..+ +..++.|+.+ + ...++.||...... ...|..........-. .. ++
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~----~~-~~ 602 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY----GS-QI 602 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB----SC-EE
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc----cc-eE
Confidence 000 0001111222333333 5566666542 1 23467788755431 0011111100000000 11 22
Q ss_pred EEcCCCCeEEEecC--------CCeEEEEeCCCceeeeccCCCCcc----------eEEEEECCCCCEEEEEEec
Q 019384 250 AFHPIYGTFATGGC--------DGFVNVWDGNNKKRLYQYSKYPTS----------IAALSFSRDGRLLAVASSY 306 (342)
Q Consensus 250 ~~sp~~~~l~sgs~--------Dg~I~iWd~~~~~~~~~~~~~~~~----------V~~v~~spdg~~las~s~~ 306 (342)
+...++.+++.|+. -..|.+||..+.+-. ... .... -.++..-++|++++.|+..
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~-~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT-SIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE-ECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE-Eee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 23333677777774 346999998875422 111 1111 1345555777888888763
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.04 E-value=6.4 Score=39.73 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=32.3
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE 56 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~ 56 (342)
.+.|.+++..++..+++|-+.|+++|||++.++.+...
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 45778888888888999999999999999998876554
No 338
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=71.96 E-value=45 Score=31.34 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=41.2
Q ss_pred eeeEEEEcCCCCeEE-EecC-----------CCeEEEEeCCCceeeeccCC-CCcceEEEEECCCCCEEEEEEe
Q 019384 245 PVNAIAFHPIYGTFA-TGGC-----------DGFVNVWDGNNKKRLYQYSK-YPTSIAALSFSRDGRLLAVASS 305 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~-sgs~-----------Dg~I~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s~ 305 (342)
....|+|.++|.+.+ +=.. ...|..++..+++...-+.+ ....++.++||||++.|-++-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 456799999988665 3211 22577777766664433333 2357899999999998877764
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=70.04 E-value=66 Score=30.29 Aligned_cols=107 Identities=12% Similarity=0.030 Sum_probs=59.1
Q ss_pred EEEEeeCCceEEEEcc-CCeEEEEEeechhhhhc---c--cceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecCCCe
Q 019384 193 CVRCYPNGTGYALSSV-EGRVAMEFFDLSEASQA---K--KYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGF 266 (342)
Q Consensus 193 ~v~~~~~~~~~~~~s~-~~~~~i~~~d~~~~~~~---~--~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~ 266 (342)
.+..+|+|++++++.. +.++ .++|....... + ...-..+.+.+.+. ...-.+|.++|.-+.|--.|.+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptv--tV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl----GPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTC--SMIAIDKLPDLFAGKLADPRDVIVGEPELGL----GPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBE--EEEEGGGHHHHHTTCCSCGGGGEEECCBCCS----CEEEEEECSSSEEEEEETTTTE
T ss_pred ceeeCCCCCEEEEcCCCCCeE--EEEEeehhhhhhhccccCcccceEeeccCCC----cccEEEECCCCceEeeeeecce
Confidence 4678999998877664 4444 45776532110 0 00000111111111 1234689999966777779999
Q ss_pred EEEEeCCCc----------eeeeccCCCCcceEEE-----EECCCCCEEEEEEe
Q 019384 267 VNVWDGNNK----------KRLYQYSKYPTSIAAL-----SFSRDGRLLAVASS 305 (342)
Q Consensus 267 I~iWd~~~~----------~~~~~~~~~~~~V~~v-----~~spdg~~las~s~ 305 (342)
|--|++... ..+..+.-|-.+-+-. .-.|||+||++...
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 999997642 2233332222211111 23689999999885
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=69.29 E-value=50 Score=27.71 Aligned_cols=180 Identities=12% Similarity=0.093 Sum_probs=77.0
Q ss_pred EEEEeCCCcEEEEECCCceeeeeee--cCCceEEEEEeCCCCe-EEEec----CC-------cEEEEEeccCceeecccC
Q 019384 34 LLVSSWDKSVRLYDASANVLRGEFM--HGGPVLDCCFHDDSSG-FSASA----DH-------TVRRLVFSHGKEDILGKH 99 (342)
Q Consensus 34 l~s~s~Dgti~vwd~~~~~~~~~~~--h~~~V~~~~~~~~~~~-~s~s~----D~-------~i~~w~~~~~~~~~~~~h 99 (342)
++.|+ ..+.+||..+++...... ........+...++.+ +.|+. ++ .+..+|..+.....+..-
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34454 568999998876432111 1111122222334454 45553 11 255667666553322110
Q ss_pred -Ccce-eEEEEeCCCCEEEEeeCC--------CcEEEEcCCCCCCcceeeeeecCCCC-cEEEEeccCCeEEEEEc-C--
Q 019384 100 -DAPV-RCIEYSYAAGQVITGSWD--------KSLKCWDPRGASGQERTLVGTYPQPE-RVYSLSLVGNRLVVATA-G-- 165 (342)
Q Consensus 100 -~~~V-~~~~~~~~~~~l~sgs~D--------~~I~iWd~~~~~~~~~~~~~~~~~~~-~v~~~s~~~~~~~~~s~-d-- 165 (342)
...- .+++.. ++..++.|+.+ ..+.++|+.+.. -..+....... .......++..++.++. +
T Consensus 86 p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 86 PSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFK---WGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp SSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTE---EEECCCCSSCCBSCEEEEETTEEEEECCBCTTS
T ss_pred CcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCc---EeECCCCCCcccceeEEEECCEEEEEeCCCCCC
Confidence 0000 112222 45566666642 357888876431 01111111111 11122334445555554 2
Q ss_pred ---CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCe---EEEEEeechh
Q 019384 166 ---RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGR---VAMEFFDLSE 221 (342)
Q Consensus 166 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~---~~i~~~d~~~ 221 (342)
..+.+||..+..=..............++ .-++..++.++.++. ..++.||...
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCC
Confidence 35888998764211000000001111222 225566666654432 3456788754
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=68.82 E-value=52 Score=27.67 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=42.7
Q ss_pred EEEEeCCCcEEEEECCCceeeeeeec--CCceEEEEEeCCCCeE-EEec----CC-------cEEEEEeccCceeeccc-
Q 019384 34 LLVSSWDKSVRLYDASANVLRGEFMH--GGPVLDCCFHDDSSGF-SASA----DH-------TVRRLVFSHGKEDILGK- 98 (342)
Q Consensus 34 l~s~s~Dgti~vwd~~~~~~~~~~~h--~~~V~~~~~~~~~~~~-s~s~----D~-------~i~~w~~~~~~~~~~~~- 98 (342)
++-|+. .+.+||..+.+....... .......+...++.++ .|+. ++ .+..+|..+.....+..
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 96 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL 96 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB
T ss_pred hhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC
Confidence 344443 388999987764332111 1111222223445554 5552 11 15566766655332211
Q ss_pred --CCcceeEEEEeCCCCEEEEeeCC-------CcEEEEcCCC
Q 019384 99 --HDAPVRCIEYSYAAGQVITGSWD-------KSLKCWDPRG 131 (342)
Q Consensus 99 --h~~~V~~~~~~~~~~~l~sgs~D-------~~I~iWd~~~ 131 (342)
....- +++.. ++..++.|+.+ ..+.++|+.+
T Consensus 97 p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 136 (318)
T 2woz_A 97 PSARCLF-GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVA 136 (318)
T ss_dssp SSCBCSC-EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTT
T ss_pred Ccccccc-ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCC
Confidence 11111 22222 55666777654 2467778764
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=68.73 E-value=8.9 Score=33.48 Aligned_cols=102 Identities=11% Similarity=0.105 Sum_probs=59.2
Q ss_pred CeEEEEeCCCcEEEEECCCceeeeeeecC--CceEEEEEe---CCCCeEEE--ecCCcEEEEEeccCceee---cc--cC
Q 019384 32 DHLLVSSWDKSVRLYDASANVLRGEFMHG--GPVLDCCFH---DDSSGFSA--SADHTVRRLVFSHGKEDI---LG--KH 99 (342)
Q Consensus 32 ~~l~s~s~Dgti~vwd~~~~~~~~~~~h~--~~V~~~~~~---~~~~~~s~--s~D~~i~~w~~~~~~~~~---~~--~h 99 (342)
.+++.++.||.|.-.|..+|+.+..+... .++....-. .++.++.. +.||.+..++..++.... +. -.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47788999999999999988876655433 233322111 12233433 468888777766554221 00 01
Q ss_pred CcceeE-E--EE-----eCCCCEEEEeeCCCcEEEEcCCCCC
Q 019384 100 DAPVRC-I--EY-----SYAAGQVITGSWDKSLKCWDPRGAS 133 (342)
Q Consensus 100 ~~~V~~-~--~~-----~~~~~~l~sgs~D~~I~iWd~~~~~ 133 (342)
..++.. - .. ...+..+++|+.++++...|++++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 122211 0 00 0145688999999999999988654
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.98 E-value=6.1 Score=40.72 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=31.4
Q ss_pred CCCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeee
Q 019384 19 SDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGE 56 (342)
Q Consensus 19 ~~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~ 56 (342)
.+.|.+++..++...|+|-+.|+++|||++.++.+..+
T Consensus 237 ~~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 237 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp TTCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred cceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 45666777778888999999999999999998876554
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=66.04 E-value=61 Score=27.47 Aligned_cols=162 Identities=12% Similarity=0.078 Sum_probs=77.6
Q ss_pred EEeCCCCEEEEeeC--------------CCcEEEEcCCCCCCcceeeeeecCCCCcEEEEeccCCeEEEEE--cCC--eE
Q 019384 107 EYSYAAGQVITGSW--------------DKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVAT--AGR--HV 168 (342)
Q Consensus 107 ~~~~~~~~l~sgs~--------------D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~s--~d~--~v 168 (342)
-++++++.|+=+.. ...|+..++.... ...+.. .....+++.++.|+... .++ .|
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~---~~~l~~----~~~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG---STVLDP----DPCIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC---CEEEEC----SCEEEEEEETTEEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc---ceEeec----CCccEEEEeCCEEEEEeecCCCCceE
Confidence 34667777654433 2457777775432 122321 12235777888877665 233 45
Q ss_pred EEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeeeeE
Q 019384 169 NVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNA 248 (342)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~ 248 (342)
...++..... ++.... .. ..+.++++.+...+. +.-.|+..++...... ..+.+ +. .
T Consensus 132 y~~~~dGs~~--~~lt~~---~~--~~~~~~g~~iy~t~~-g~~~Iy~~~l~g~~~~--~l~~~------------~~-~ 188 (302)
T 3s25_A 132 YRIRIDGEEK--KKIKNH---YL--FTCNTSDRYFYYNNP-KNGQLYRYDTASQSEA--LFYDC------------NC-Y 188 (302)
T ss_dssp EEEETTSCCC--EEEESS---CC--CCSEEETTEEEEECT-TTCCEEEEETTTTEEE--EEECS------------CE-E
T ss_pred EEEECCCCCe--EEEeCC---Cc--eEeeEECCEEEEEeC-CCceEEEEECCCCCEE--EEeCC------------Cc-c
Confidence 5556553221 111111 01 345677777776655 3334455555332211 11110 11 1
Q ss_pred EEEcCCCCeEEEecCC--CeEEEEeCCCceeeeccCCCCcceEEEEECCCCCEEEEE
Q 019384 249 IAFHPIYGTFATGGCD--GFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 249 v~~sp~~~~l~sgs~D--g~I~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~ 303 (342)
..++|++++|+-...+ ..|..=+++... ...+.. ..+ ..|+|+|.+|.-+
T Consensus 189 ~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 189 KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEE
T ss_pred ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEE
Confidence 2356888877544333 245444554332 333332 222 3478888888654
No 345
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.74 E-value=20 Score=33.91 Aligned_cols=59 Identities=14% Similarity=0.064 Sum_probs=38.1
Q ss_pred eeEEEEcCCCCeEEEecC------------CCeEEEEeCCCceeeeccCCC-CcceEEEEECCCCCEEEEEE
Q 019384 246 VNAIAFHPIYGTFATGGC------------DGFVNVWDGNNKKRLYQYSKY-PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 246 v~~v~~sp~~~~l~sgs~------------Dg~I~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~~las~s 304 (342)
.-.|+|+|.|.+++.-.. ...+.+.+..+++..+-+.+. ..+++.++|+||++.|.+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 456899999885544221 123555566665544333333 46899999999999887665
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=65.56 E-value=62 Score=27.41 Aligned_cols=129 Identities=9% Similarity=0.034 Sum_probs=69.0
Q ss_pred EEEeccCCeEEEEEcC--------------CeEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEc--cCCeEE
Q 019384 150 YSLSLVGNRLVVATAG--------------RHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSS--VEGRVA 213 (342)
Q Consensus 150 ~~~s~~~~~~~~~s~d--------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s--~~~~~~ 213 (342)
.-+..+++.|..+... ..|+..++...+. ..... ..+..++++++.++... .++.-.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~--~~l~~-----~~~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS--TVLDP-----DPCIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC--EEEEC-----SCEEEEEEETTEEEEEEESSSSCEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc--eEeec-----CCccEEEEeCCEEEEEeecCCCCce
Confidence 3466677777766543 3567777765432 11111 11225677777777665 344555
Q ss_pred EEEeechhhhhcccceeeeEEecCCCCceeeeeeEEEEcCCCCeEEEecC-CCeEEEEeCCCceeeeccCCCCcceEEEE
Q 019384 214 MEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGC-DGFVNVWDGNNKKRLYQYSKYPTSIAALS 292 (342)
Q Consensus 214 i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~-Dg~I~iWd~~~~~~~~~~~~~~~~V~~v~ 292 (342)
|+..++..... . .+..+ .+ .+|+|+++.|.-.+. ..+|++-++..+.....+.+ ... ..
T Consensus 131 Iy~~~~dGs~~-~--~lt~~-----------~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~ 190 (302)
T 3s25_A 131 LYRIRIDGEEK-K--KIKNH-----------YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KP 190 (302)
T ss_dssp EEEEETTSCCC-E--EEESS-----------CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EE
T ss_pred EEEEECCCCCe-E--EEeCC-----------Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ce
Confidence 66666542211 1 11111 11 346778887764443 56888888776543322322 222 34
Q ss_pred ECCCCCEEEEEEe
Q 019384 293 FSRDGRLLAVASS 305 (342)
Q Consensus 293 ~spdg~~las~s~ 305 (342)
+.|++.+|.-...
T Consensus 191 ~~P~g~~iy~t~~ 203 (302)
T 3s25_A 191 VVLDDTNVYYMDV 203 (302)
T ss_dssp EEEETTEEEEEEG
T ss_pred eeecCCEEEEEEc
Confidence 6699999887653
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=63.88 E-value=71 Score=29.04 Aligned_cols=51 Identities=12% Similarity=0.166 Sum_probs=33.8
Q ss_pred CeEEEEEcCCCC-eEEEEeCCCcEEEEECCCce----eee---eee------cCCceEEEEEeCC
Q 019384 21 GISNLRFSNHSD-HLLVSSWDKSVRLYDASANV----LRG---EFM------HGGPVLDCCFHDD 71 (342)
Q Consensus 21 ~V~~l~fs~~~~-~l~s~s~Dgti~vwd~~~~~----~~~---~~~------h~~~V~~~~~~~~ 71 (342)
.-++|+|.||++ +|+.+...|.|++++..... +.. .+. -.+....++|.|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 457899999996 56566788999999764321 111 111 1356788999875
No 348
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=63.42 E-value=1.1e+02 Score=29.56 Aligned_cols=234 Identities=5% Similarity=-0.025 Sum_probs=110.1
Q ss_pred EE-EcCCCCeEEE----EeCC-CcEEEEECCCceeeeeeec---CC------ceEEEEEeCCCCeEEEec----------
Q 019384 25 LR-FSNHSDHLLV----SSWD-KSVRLYDASANVLRGEFMH---GG------PVLDCCFHDDSSGFSASA---------- 79 (342)
Q Consensus 25 l~-fs~~~~~l~s----~s~D-gti~vwd~~~~~~~~~~~h---~~------~V~~~~~~~~~~~~s~s~---------- 79 (342)
+. ++|+++++|- ||.| .++|++|+.+++....-.. ++ ....++|.+++.++.++.
T Consensus 134 ~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~ 213 (711)
T 4hvt_A 134 VSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSL 213 (711)
T ss_dssp EEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTS
T ss_pred eeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCC
Confidence 44 8999998763 2333 7899999988765431111 01 012336665555544321
Q ss_pred -CCcEEEEEeccCc---eeecccCCcce-eEEEEeCCCC-----EEEEeeCC---CcEEEEcCCCCCCcceeeeeecCCC
Q 019384 80 -DHTVRRLVFSHGK---EDILGKHDAPV-RCIEYSYAAG-----QVITGSWD---KSLKCWDPRGASGQERTLVGTYPQP 146 (342)
Q Consensus 80 -D~~i~~w~~~~~~---~~~~~~h~~~V-~~~~~~~~~~-----~l~sgs~D---~~I~iWd~~~~~~~~~~~~~~~~~~ 146 (342)
...++.|-+.+.. ..++.+....+ .+...+++++ .+++.+.| ..+.+.|........ ..+.. ...
T Consensus 214 ~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~-~~~ 291 (711)
T 4hvt_A 214 YPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINM-PSD 291 (711)
T ss_dssp SBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCS-CTT
T ss_pred CCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeec-CCc
Confidence 2346677665543 23444433333 2444556655 25554433 234555654322211 11111 111
Q ss_pred CcEEEEeccCCeEEEE-----------EcCCeEEEEeCCCCCC------ccc-ccccccceeeEEEEEeeCCceEEEEcc
Q 019384 147 ERVYSLSLVGNRLVVA-----------TAGRHVNVYDLRNMSQ------PEQ-RRESSLKYQTRCVRCYPNGTGYALSSV 208 (342)
Q Consensus 147 ~~v~~~s~~~~~~~~~-----------s~d~~v~iwd~~~~~~------~~~-~~~~~~~~~~~~v~~~~~~~~~~~~s~ 208 (342)
..+ +...++.++.- ...+.|...|+.+... ..+ ...+.....+..+.+..+ ..+++...
T Consensus 292 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~ 368 (711)
T 4hvt_A 292 ATL--QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYD 368 (711)
T ss_dssp CEE--EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEE
T ss_pred ceE--eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEE
Confidence 111 12223333331 2345688888865311 011 112222334556666654 45666667
Q ss_pred CCeEEEEEeechhhh-hccc-ceeeeEEecCCCCceeeeeeEEEEcCCCCe-EEEec---CCCeEEEEeCC
Q 019384 209 EGRVAMEFFDLSEAS-QAKK-YAFKCHRKSEAGRDIVYPVNAIAFHPIYGT-FATGG---CDGFVNVWDGN 273 (342)
Q Consensus 209 ~~~~~i~~~d~~~~~-~~~~-~~~~~h~~~~~~~~~~~~v~~v~~sp~~~~-l~sgs---~Dg~I~iWd~~ 273 (342)
++...+.++|..... .... ..+.. .+.+..+..++++.. +++.+ .=+++..+|..
T Consensus 369 ~~~~~l~~~~~~~g~~~~~~~i~lp~----------~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 369 NVVAKVVTFTLENEQWTKPVVLKLPY----------QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTEEEEEEECEETTEECCCEEECCCS----------TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCEEEEEEEECCCCceEEEeccCCCC----------CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 777778888864321 1111 11110 012444556676654 34433 23478888875
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.60 E-value=11 Score=38.07 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=30.9
Q ss_pred eeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec
Q 019384 245 PVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ 280 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~ 280 (342)
.+.+++..++..++++=+.|+++|+|++.+++++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 467788888888999999999999999999887654
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=53.67 E-value=23 Score=34.24 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=28.1
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeee
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEF 57 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~ 57 (342)
..|.++.+. ..+|+|-+.|+++|+|++.++.+....
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 346666554 679999999999999999998766543
No 351
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.40 E-value=12 Score=38.52 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=30.1
Q ss_pred eeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec
Q 019384 245 PVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ 280 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~ 280 (342)
.+.+++..++..++++=+.|+++|||++.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 355667778888999999999999999999887654
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.37 E-value=1.6e+02 Score=25.57 Aligned_cols=23 Identities=9% Similarity=0.212 Sum_probs=14.1
Q ss_pred CCCeEEEEEcC-CCCeEEEEeCCC
Q 019384 19 SDGISNLRFSN-HSDHLLVSSWDK 41 (342)
Q Consensus 19 ~~~V~~l~fs~-~~~~l~s~s~Dg 41 (342)
...|.+|+++| +...|..+...|
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCceEEEEECCCCCCeEEEEecCC
Confidence 45799999998 334444444444
No 353
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=42.25 E-value=1.7e+02 Score=25.46 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=65.7
Q ss_pred EEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec-cCCeEEEEEcCCeEEEEeCCCCCCccccc
Q 019384 105 CIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL-VGNRLVVATAGRHVNVYDLRNMSQPEQRR 183 (342)
Q Consensus 105 ~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~~~~~s~d~~v~iwd~~~~~~~~~~~ 183 (342)
+...+|..+.||-=+ ..++.++|+++.. .+..+.....++-+.| +.+.++..+. ..|.-|++...+.|....
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~-----klks~~~~e~VvfWkWis~~~L~lVT~-taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKS-----KMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTE-----EEEEEECSSCEEEEEECSSSEEEEEES-SEEEEEESSTTCCCEEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhh-----hhcceecCCccEEEEecCCCeEEEEcC-CcEEEEcccCCCCCceee
Confidence 345688777665443 6789999998532 3455555567777887 4567777765 478999997655553332
Q ss_pred cc--cc-ceeeEEEEEeeCCceEEEEc---cCCeE--EEEEeech
Q 019384 184 ES--SL-KYQTRCVRCYPNGTGYALSS---VEGRV--AMEFFDLS 220 (342)
Q Consensus 184 ~~--~~-~~~~~~v~~~~~~~~~~~~s---~~~~~--~i~~~d~~ 220 (342)
+. .+ ..++..-...++.+.+++.+ .++.+ .+.+|..+
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 188 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 188 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec
Confidence 22 11 24455555677777655433 23332 34567663
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=38.67 E-value=41 Score=32.60 Aligned_cols=34 Identities=9% Similarity=0.102 Sum_probs=26.8
Q ss_pred eeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeec
Q 019384 245 PVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQ 280 (342)
Q Consensus 245 ~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~ 280 (342)
.|.++.+ +..+|++=+.|+++|+|++++++++.+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 4555555 367899999999999999999887653
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=37.50 E-value=71 Score=29.06 Aligned_cols=59 Identities=10% Similarity=0.106 Sum_probs=36.7
Q ss_pred eeEEEEcCCCC-eEEEecCCCeEEEEeCCCce---eeeccC-----C----CCcceEEEEECCC----CCEEEEEE
Q 019384 246 VNAIAFHPIYG-TFATGGCDGFVNVWDGNNKK---RLYQYS-----K----YPTSIAALSFSRD----GRLLAVAS 304 (342)
Q Consensus 246 v~~v~~sp~~~-~l~sgs~Dg~I~iWd~~~~~---~~~~~~-----~----~~~~V~~v~~spd----g~~las~s 304 (342)
-..|+|.|+|. .|+.+...|.|++++..... .+..+. + ...-...|+|+|| +.+.++-+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 45789999985 34445567999999754221 122111 1 1345789999997 66555544
No 356
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=35.15 E-value=2e+02 Score=24.22 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=16.9
Q ss_pred CCCeEEEEeC-C---------CcEEEEECCCceee
Q 019384 30 HSDHLLVSSW-D---------KSVRLYDASANVLR 54 (342)
Q Consensus 30 ~~~~l~s~s~-D---------gti~vwd~~~~~~~ 54 (342)
++..++.|+. + ..+.+||..+....
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEE
Confidence 5666677766 2 46888998876543
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=29.58 E-value=3.8e+02 Score=25.61 Aligned_cols=273 Identities=11% Similarity=0.057 Sum_probs=132.4
Q ss_pred CCeEEEEEcCCCCeEEEEeCCCcEEEEECCCceeeeeee--------cCCceEEEEEeCCCCeEEEecCCcEEEEEeccC
Q 019384 20 DGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFM--------HGGPVLDCCFHDDSSGFSASADHTVRRLVFSHG 91 (342)
Q Consensus 20 ~~V~~l~fs~~~~~l~s~s~Dgti~vwd~~~~~~~~~~~--------h~~~V~~~~~~~~~~~~s~s~D~~i~~w~~~~~ 91 (342)
..|.++...++|.+.+ |..+| +.+++..++.+..... ....|.++.....+.+-.|+..| +.+... ..
T Consensus 232 ~~i~~i~~d~~g~lWi-gT~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~-~~ 307 (758)
T 3ott_A 232 NSIKSLALDGNGDLLA-GTDNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRY-NS 307 (758)
T ss_dssp EEEEEEEECTTCCEEE-EETTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECC-CC
T ss_pred CeEEEEEEcCCCCEEE-EeCCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-cccccc-CC
Confidence 3577777777776655 44444 6777876654332211 12357777766666666666655 433322 11
Q ss_pred ceeec-------ccCCcceeEEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeee----c-CCCCcEEEEeccC-Ce
Q 019384 92 KEDIL-------GKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGT----Y-PQPERVYSLSLVG-NR 158 (342)
Q Consensus 92 ~~~~~-------~~h~~~V~~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~----~-~~~~~v~~~s~~~-~~ 158 (342)
....+ ......|.++.-..++.+- .|+.+ .+..++..++.......... . -....+.++..+. ..
T Consensus 308 ~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lW-iGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 385 (758)
T 3ott_A 308 ALQFIPISQITGTGDGNQFYSLFRDSKGFYW-FGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQ 385 (758)
T ss_dssp -CEEEEHHHHSCSCCCCBEEEEEECTTCCEE-EEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSC
T ss_pred ceeEEecccCCCCCCCceEEEEEEcCCCCEE-EeeCC-cceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCC
Confidence 11111 0123468888777666544 44544 56667654321111111110 0 0123466666654 35
Q ss_pred EEEEEcCCeEEEEeCCCCCCcccccccc----cceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhc--ccceeee
Q 019384 159 LVVATAGRHVNVYDLRNMSQPEQRRESS----LKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQA--KKYAFKC 232 (342)
Q Consensus 159 ~~~~s~d~~v~iwd~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~--~~~~~~~ 232 (342)
+-+|+ ++-+..||..+........... ....+.++...+++ .+.+++..+-+ ..+|....... ..+....
T Consensus 386 lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigT~~~Gl--~~~~~~~~~~~~~~~~~~~~ 461 (758)
T 3ott_A 386 LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG-QLWISTCLGGI--FVVDKHKLMQSTSGQYIAEQ 461 (758)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTS-EEEEEESSSCE--EEEEHHHHHHCCSSEEECSE
T ss_pred EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCC-CEEEEECCCce--EEEccccccccCCcceeccc
Confidence 66677 4578889987642211100000 01123444444444 35566543322 34664321000 0110000
Q ss_pred EEecCCCCceeeeeeEEEEcCCCCeEEEecCCCeEEEEeCCCceeeeccC-CC--CcceEEEEECCCCCEEEEE
Q 019384 233 HRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYS-KY--PTSIAALSFSRDGRLLAVA 303 (342)
Q Consensus 233 h~~~~~~~~~~~~v~~v~~sp~~~~l~sgs~Dg~I~iWd~~~~~~~~~~~-~~--~~~V~~v~~spdg~~las~ 303 (342)
+.....+.. ...|.++...++|...+.++..+-|..+|.++++...... .. ...+.++....+|.+.+.+
T Consensus 462 ~~~~~~~l~-~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt 534 (758)
T 3ott_A 462 NYSVHNGLS-GMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF 534 (758)
T ss_dssp EECGGGTCS-CSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE
T ss_pred ccccccccc-cceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe
Confidence 000000100 1137888888887755433444558888987765432111 11 2467889889999866543
No 358
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=26.90 E-value=4.7e+02 Score=27.96 Aligned_cols=115 Identities=16% Similarity=0.203 Sum_probs=65.2
Q ss_pred eEEEEeCCCCCCcccccccccceeeEEEEEeeCCceEEEEccCCeEEEEEeechhhhhcccceeeeEEecCCCCceeeee
Q 019384 167 HVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPV 246 (342)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~h~~~~~~~~~~~~v 246 (342)
.|.|.|+.++..+.++.. ...+...+|..+.++.-+ +. .+.+||+......+.+.+.- +|
T Consensus 49 ~vvIidl~~~~~~~rrpi-----~AdsAIMnP~~~iiALra-g~--~lQiFnl~~k~klks~~~~e------------~V 108 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPI-----SADSAIMNPASKVIALKA-GK--TLQIFNIEMKSKMKAHTMTD------------DV 108 (1630)
T ss_pred eEEEEECCCCCCcccccc-----cchhhccCCCcceEEEec-CC--eEEEeehHHhhhhcccccCC------------Cc
Confidence 688889887654432211 122334577777777665 33 45679986554443332211 23
Q ss_pred eEEEEc-CCCCeEEEecCCCeEEEEeCCCc-eeeeccCCC----CcceEEEEECCCCCEEEEEE
Q 019384 247 NAIAFH-PIYGTFATGGCDGFVNVWDGNNK-KRLYQYSKY----PTSIAALSFSRDGRLLAVAS 304 (342)
Q Consensus 247 ~~v~~s-p~~~~l~sgs~Dg~I~iWd~~~~-~~~~~~~~~----~~~V~~v~~spdg~~las~s 304 (342)
.-=.|- ++.--|+| +..|+-|++... .+...+..| ...|..-.-++|.++++..+
T Consensus 109 vfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 109 TFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred eEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 222343 32222344 347999998642 333334444 35788888999999887665
No 359
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=25.30 E-value=3.9e+02 Score=24.35 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=64.3
Q ss_pred EEEEeCCCCEEEEeeCCCcEEEEcCCCCCCcceeeeeecCCCCcEEEEec-cCCeEEEEEcCCeEEEEeCCCCCCccccc
Q 019384 105 CIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL-VGNRLVVATAGRHVNVYDLRNMSQPEQRR 183 (342)
Q Consensus 105 ~~~~~~~~~~l~sgs~D~~I~iWd~~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~~~~~s~d~~v~iwd~~~~~~~~~~~ 183 (342)
+...+|..+.|+-=. ..++.++|+++.. .+..+.....++-+.| +++.++..+. ..|.-|++...+.|...+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~-----klks~~~~e~VvfWkWis~~~l~lVT~-taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKS-----KMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTE-----EEEEEECSSCCCEEEEEETTEEEEECS-SEEEEEESSSSCCCEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhh-----hhcceecCCCceEEEecCCCeEEEEcC-CeeEEecccCCCCchhhe
Confidence 455678776665443 6799999997532 3444444555666776 4667776665 478999997655553333
Q ss_pred cc--cc-ceeeEEEEEeeCCceEEEEc---cCCeE--EEEEeech
Q 019384 184 ES--SL-KYQTRCVRCYPNGTGYALSS---VEGRV--AMEFFDLS 220 (342)
Q Consensus 184 ~~--~~-~~~~~~v~~~~~~~~~~~~s---~~~~~--~i~~~d~~ 220 (342)
+. .+ ..++..-..+++.+.+++.+ .++.+ .+.+|+.+
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 187 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc
Confidence 22 11 24455556677777765433 23322 34567663
Done!