Query 019387
Match_columns 342
No_of_seqs 177 out of 1960
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 15:18:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 6.1E-65 2.1E-69 487.2 31.4 304 10-338 23-336 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 1.5E-64 5.1E-69 483.5 25.7 292 16-338 1-319 (334)
3 4e5n_A Thermostable phosphite 100.0 1.9E-62 6.4E-67 468.4 30.1 299 15-338 2-317 (330)
4 3k5p_A D-3-phosphoglycerate de 100.0 3E-62 1E-66 477.1 29.7 299 9-338 9-322 (416)
5 4dgs_A Dehydrogenase; structur 100.0 1E-62 3.5E-67 470.9 23.5 305 1-338 18-331 (340)
6 1sc6_A PGDH, D-3-phosphoglycer 100.0 3.7E-61 1.3E-65 470.4 29.0 296 12-338 1-311 (404)
7 3hg7_A D-isomer specific 2-hyd 100.0 8.7E-61 3E-65 454.8 23.2 289 13-338 3-302 (324)
8 2yq5_A D-isomer specific 2-hyd 100.0 8.6E-61 3E-65 458.1 21.4 296 15-338 1-323 (343)
9 3gg9_A D-3-phosphoglycerate de 100.0 5E-60 1.7E-64 454.8 26.3 297 16-338 3-325 (352)
10 3evt_A Phosphoglycerate dehydr 100.0 1.4E-60 4.7E-65 453.9 21.5 289 15-338 1-301 (324)
11 3jtm_A Formate dehydrogenase, 100.0 4.2E-60 1.5E-64 454.9 23.7 298 17-338 21-330 (351)
12 2pi1_A D-lactate dehydrogenase 100.0 1.4E-59 4.8E-64 449.1 22.5 293 16-338 1-319 (334)
13 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 1.9E-58 6.4E-63 441.3 29.7 297 12-338 23-328 (335)
14 1xdw_A NAD+-dependent (R)-2-hy 100.0 4.4E-58 1.5E-62 438.8 27.6 295 16-338 1-322 (331)
15 1j4a_A D-LDH, D-lactate dehydr 100.0 4.5E-58 1.5E-62 439.1 26.8 295 16-338 2-322 (333)
16 1wwk_A Phosphoglycerate dehydr 100.0 6.4E-58 2.2E-62 433.4 27.4 295 14-338 2-306 (307)
17 2cuk_A Glycerate dehydrogenase 100.0 1.4E-57 4.8E-62 431.7 28.5 292 16-338 1-302 (311)
18 4hy3_A Phosphoglycerate oxidor 100.0 1.1E-58 3.6E-63 446.5 21.0 297 12-338 24-339 (365)
19 1gdh_A D-glycerate dehydrogena 100.0 5.2E-57 1.8E-61 429.5 31.4 298 16-338 2-310 (320)
20 1dxy_A D-2-hydroxyisocaproate 100.0 5E-58 1.7E-62 438.6 23.8 294 16-338 1-320 (333)
21 2ekl_A D-3-phosphoglycerate de 100.0 8.9E-57 3E-61 426.6 30.0 292 15-338 5-308 (313)
22 2nac_A NAD-dependent formate d 100.0 4.3E-57 1.5E-61 439.1 25.3 286 30-338 60-357 (393)
23 2j6i_A Formate dehydrogenase; 100.0 1.1E-57 3.7E-62 440.9 18.9 301 14-338 16-336 (364)
24 3pp8_A Glyoxylate/hydroxypyruv 100.0 7.4E-57 2.5E-61 426.9 23.3 283 14-338 2-301 (315)
25 3ba1_A HPPR, hydroxyphenylpyru 100.0 2.6E-55 9E-60 419.4 27.3 294 13-338 21-324 (333)
26 2gcg_A Glyoxylate reductase/hy 100.0 1.7E-54 5.7E-59 414.0 30.4 305 11-338 4-320 (330)
27 1mx3_A CTBP1, C-terminal bindi 100.0 2.7E-55 9.4E-60 421.3 23.7 304 10-338 16-334 (347)
28 3oet_A Erythronate-4-phosphate 100.0 5.3E-55 1.8E-59 421.6 24.3 270 14-339 2-283 (381)
29 2dbq_A Glyoxylate reductase; D 100.0 1.4E-53 4.9E-58 408.1 29.4 298 16-338 3-313 (334)
30 2w2k_A D-mandelate dehydrogena 100.0 3.6E-54 1.2E-58 414.3 23.7 302 13-338 1-329 (348)
31 2d0i_A Dehydrogenase; structur 100.0 2.1E-53 7.4E-58 406.7 25.6 294 15-338 2-309 (333)
32 1qp8_A Formate dehydrogenase; 100.0 1.7E-53 5.8E-58 402.2 21.2 274 16-338 1-287 (303)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 4.7E-52 1.6E-56 419.9 28.0 294 13-337 2-304 (529)
34 3gvx_A Glycerate dehydrogenase 100.0 7.2E-53 2.5E-57 394.8 19.9 240 62-338 34-281 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 1.4E-51 4.7E-56 398.6 23.1 267 16-338 1-279 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.7E-32 5.7E-37 271.6 3.4 194 87-318 194-401 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 3.5E-32 1.2E-36 270.1 1.8 192 87-317 214-417 (494)
38 3d4o_A Dipicolinate synthase s 100.0 5.4E-29 1.9E-33 233.6 15.2 216 13-276 3-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 1.3E-25 4.3E-30 211.3 15.9 222 13-276 5-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 5.9E-23 2E-27 204.5 6.2 192 90-318 215-422 (494)
41 2vhw_A Alanine dehydrogenase; 99.8 3.1E-20 1E-24 180.0 18.8 249 23-318 17-307 (377)
42 3h9u_A Adenosylhomocysteinase; 99.8 1.6E-18 5.3E-23 169.1 14.9 145 104-285 167-312 (436)
43 1x13_A NAD(P) transhydrogenase 99.7 6.5E-18 2.2E-22 164.9 13.8 240 24-279 25-301 (401)
44 3n58_A Adenosylhomocysteinase; 99.7 5.9E-18 2E-22 164.9 13.3 141 107-284 206-347 (464)
45 1l7d_A Nicotinamide nucleotide 99.7 8.4E-17 2.9E-21 156.2 15.8 245 23-278 17-302 (384)
46 1gtm_A Glutamate dehydrogenase 99.7 1.2E-18 4E-23 170.5 0.9 121 160-312 206-341 (419)
47 3gvp_A Adenosylhomocysteinase 99.7 9.8E-17 3.3E-21 156.0 13.6 140 107-283 179-319 (435)
48 2eez_A Alanine dehydrogenase; 99.7 7E-16 2.4E-20 148.9 18.5 227 23-272 17-266 (369)
49 3p2y_A Alanine dehydrogenase/p 99.4 7.6E-11 2.6E-15 113.4 22.3 250 11-279 18-311 (381)
50 3doj_A AT3G25530, dehydrogenas 99.3 3.1E-12 1.1E-16 120.3 8.7 119 159-292 15-135 (310)
51 1gpj_A Glutamyl-tRNA reductase 99.3 4.9E-13 1.7E-17 130.5 3.2 169 88-273 83-267 (404)
52 1c1d_A L-phenylalanine dehydro 99.3 8.8E-12 3E-16 119.1 11.6 108 162-292 172-280 (355)
53 4dio_A NAD(P) transhydrogenase 99.3 1.9E-10 6.6E-15 111.5 19.2 233 29-279 47-321 (405)
54 3qsg_A NAD-binding phosphogluc 99.3 2.4E-11 8.3E-16 114.4 12.1 131 142-289 2-134 (312)
55 3l6d_A Putative oxidoreductase 99.3 7.2E-12 2.5E-16 117.6 8.3 117 161-292 5-121 (306)
56 3obb_A Probable 3-hydroxyisobu 99.3 7.6E-12 2.6E-16 117.3 7.9 115 166-297 4-120 (300)
57 4dll_A 2-hydroxy-3-oxopropiona 99.2 8.5E-12 2.9E-16 117.9 7.8 116 163-293 29-145 (320)
58 4gbj_A 6-phosphogluconate dehy 99.2 1.2E-11 4.2E-16 115.7 7.8 120 166-300 6-125 (297)
59 4e21_A 6-phosphogluconate dehy 99.2 7.6E-11 2.6E-15 113.2 11.3 124 163-303 20-146 (358)
60 3ond_A Adenosylhomocysteinase; 99.2 1.3E-10 4.5E-15 114.9 13.2 153 93-282 209-363 (488)
61 3pef_A 6-phosphogluconate dehy 99.2 4.1E-11 1.4E-15 111.2 7.9 112 166-292 2-115 (287)
62 3qha_A Putative oxidoreductase 99.2 3.3E-11 1.1E-15 112.6 6.9 112 165-293 15-126 (296)
63 3pdu_A 3-hydroxyisobutyrate de 99.1 4.2E-11 1.4E-15 111.1 6.0 112 166-292 2-115 (287)
64 2d5c_A AROE, shikimate 5-dehyd 99.1 3E-10 1E-14 104.2 11.2 198 30-291 21-223 (263)
65 3g0o_A 3-hydroxyisobutyrate de 99.1 5.9E-11 2E-15 111.1 6.0 113 165-292 7-122 (303)
66 2h78_A Hibadh, 3-hydroxyisobut 99.1 1.5E-10 5.3E-15 107.9 8.2 111 166-291 4-116 (302)
67 4gwg_A 6-phosphogluconate dehy 99.1 2.1E-10 7.1E-15 114.1 9.5 128 165-303 4-134 (484)
68 4ezb_A Uncharacterized conserv 99.1 2.3E-10 7.7E-15 108.0 9.3 123 165-301 24-150 (317)
69 3dtt_A NADP oxidoreductase; st 99.1 1.5E-10 5E-15 105.2 6.8 108 149-272 3-124 (245)
70 2hk9_A Shikimate dehydrogenase 99.0 6.8E-10 2.3E-14 102.6 8.7 216 10-288 8-233 (275)
71 4e12_A Diketoreductase; oxidor 99.0 1.9E-09 6.4E-14 99.9 11.4 142 166-312 5-160 (283)
72 1vpd_A Tartronate semialdehyde 99.0 6.9E-10 2.4E-14 103.1 6.6 111 166-291 6-118 (299)
73 3cky_A 2-hydroxymethyl glutara 99.0 1.4E-09 4.8E-14 101.0 8.7 109 166-289 5-115 (301)
74 2g5c_A Prephenate dehydrogenas 98.9 2.4E-09 8.3E-14 98.6 9.8 109 166-289 2-113 (281)
75 2zyd_A 6-phosphogluconate dehy 98.9 3E-09 1E-13 105.8 10.4 119 163-293 13-134 (480)
76 1leh_A Leucine dehydrogenase; 98.9 6.6E-09 2.3E-13 99.7 12.3 108 162-291 170-278 (364)
77 2gf2_A Hibadh, 3-hydroxyisobut 98.9 1.7E-09 5.9E-14 100.2 7.1 107 167-288 2-110 (296)
78 3ggo_A Prephenate dehydrogenas 98.9 4.4E-09 1.5E-13 99.1 9.9 111 163-288 31-144 (314)
79 1yb4_A Tartronic semialdehyde 98.9 1.5E-09 5.1E-14 100.5 6.5 108 166-289 4-113 (295)
80 2pv7_A T-protein [includes: ch 98.9 3.7E-09 1.3E-13 98.7 9.2 91 165-285 21-112 (298)
81 2uyy_A N-PAC protein; long-cha 98.9 3.6E-09 1.2E-13 99.2 8.2 111 166-291 31-143 (316)
82 2cvz_A Dehydrogenase, 3-hydrox 98.9 3E-09 1E-13 98.0 7.1 106 166-289 2-107 (289)
83 2p4q_A 6-phosphogluconate dehy 98.8 7.5E-09 2.6E-13 103.4 9.9 117 165-292 10-129 (497)
84 1pjc_A Protein (L-alanine dehy 98.8 1E-07 3.5E-12 91.4 16.8 228 23-272 17-267 (361)
85 2iz1_A 6-phosphogluconate dehy 98.8 6.9E-09 2.4E-13 103.1 8.6 123 166-300 6-131 (474)
86 1np3_A Ketol-acid reductoisome 98.8 4E-09 1.4E-13 100.3 6.5 96 161-272 12-107 (338)
87 3oj0_A Glutr, glutamyl-tRNA re 98.8 2.4E-08 8.3E-13 82.8 10.3 104 165-286 21-131 (144)
88 2yjz_A Metalloreductase steap4 98.3 7.5E-10 2.6E-14 97.8 0.0 94 163-277 17-110 (201)
89 2pgd_A 6-phosphogluconate dehy 98.8 1.3E-08 4.6E-13 101.2 8.9 124 166-300 3-129 (482)
90 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 2.3E-08 7.7E-13 99.5 9.9 125 167-299 3-130 (478)
91 3fr7_A Putative ketol-acid red 98.7 9E-09 3.1E-13 101.3 6.4 102 161-275 49-157 (525)
92 3k6j_A Protein F01G10.3, confi 98.7 6.9E-08 2.3E-12 95.3 11.6 167 115-300 11-191 (460)
93 1i36_A Conserved hypothetical 98.7 2.7E-08 9.2E-13 90.6 8.2 102 167-288 2-104 (264)
94 2dpo_A L-gulonate 3-dehydrogen 98.7 5.2E-08 1.8E-12 92.0 10.2 130 165-300 6-148 (319)
95 4a5o_A Bifunctional protein fo 98.7 8.8E-07 3E-11 81.7 17.8 171 31-276 58-237 (286)
96 3ktd_A Prephenate dehydrogenas 98.7 9.2E-09 3.2E-13 97.9 4.6 93 165-275 8-104 (341)
97 1zej_A HBD-9, 3-hydroxyacyl-CO 98.7 2.6E-08 8.8E-13 92.9 7.4 133 163-311 10-145 (293)
98 3b1f_A Putative prephenate deh 98.7 3.2E-08 1.1E-12 91.5 7.5 109 166-288 7-117 (290)
99 3d1l_A Putative NADP oxidoredu 98.6 3.3E-08 1.1E-12 90.2 6.5 102 161-278 6-108 (266)
100 2i99_A MU-crystallin homolog; 98.6 1.3E-07 4.5E-12 88.8 10.7 116 164-299 134-250 (312)
101 2q3e_A UDP-glucose 6-dehydroge 98.6 1.5E-07 5.3E-12 93.1 10.9 122 166-290 6-149 (467)
102 2vns_A Metalloreductase steap3 98.6 7.7E-08 2.6E-12 85.4 7.6 95 164-278 27-121 (215)
103 2ahr_A Putative pyrroline carb 98.6 5.2E-07 1.8E-11 81.9 12.7 102 166-289 4-105 (259)
104 2raf_A Putative dinucleotide-b 98.6 5.8E-08 2E-12 85.9 6.0 80 161-276 15-94 (209)
105 3pid_A UDP-glucose 6-dehydroge 98.6 2.8E-07 9.7E-12 90.2 11.2 124 159-289 30-170 (432)
106 2f1k_A Prephenate dehydrogenas 98.6 1E-07 3.6E-12 87.4 7.4 104 167-286 2-105 (279)
107 3gt0_A Pyrroline-5-carboxylate 98.5 1.9E-07 6.3E-12 84.5 8.8 105 166-288 3-111 (247)
108 3c24_A Putative oxidoreductase 98.5 1.4E-07 4.7E-12 87.2 6.8 92 166-275 12-104 (286)
109 2izz_A Pyrroline-5-carboxylate 98.5 7.5E-07 2.6E-11 83.8 11.0 107 164-288 21-132 (322)
110 3tri_A Pyrroline-5-carboxylate 98.4 1.1E-06 3.6E-11 81.3 11.0 106 165-288 3-112 (280)
111 1f0y_A HCDH, L-3-hydroxyacyl-C 98.4 1.1E-06 3.7E-11 81.8 10.5 130 166-300 16-161 (302)
112 1b0a_A Protein (fold bifunctio 98.4 9.3E-07 3.2E-11 81.6 9.2 169 33-276 58-235 (288)
113 3p2o_A Bifunctional protein fo 98.4 1.2E-06 4.1E-11 80.8 9.4 172 31-276 56-236 (285)
114 3ngx_A Bifunctional protein fo 98.4 1.2E-06 4.1E-11 80.4 9.2 166 32-275 51-225 (276)
115 2qrj_A Saccharopine dehydrogen 98.4 1.7E-05 6E-10 76.3 17.7 83 164-272 213-300 (394)
116 3l07_A Bifunctional protein fo 98.4 1.4E-06 4.7E-11 80.4 9.5 170 31-275 57-236 (285)
117 2c2x_A Methylenetetrahydrofola 98.3 1.5E-06 5.3E-11 79.8 9.7 172 31-277 55-237 (281)
118 3gg2_A Sugar dehydrogenase, UD 98.3 2.1E-06 7.3E-11 84.6 11.4 119 166-288 3-138 (450)
119 1mv8_A GMD, GDP-mannose 6-dehy 98.3 1.4E-06 4.8E-11 85.5 9.9 119 167-288 2-140 (436)
120 1yqg_A Pyrroline-5-carboxylate 98.3 5.4E-07 1.8E-11 81.8 6.5 101 167-289 2-103 (263)
121 1a4i_A Methylenetetrahydrofola 98.3 1.9E-06 6.5E-11 80.0 9.9 171 32-277 59-242 (301)
122 4a26_A Putative C-1-tetrahydro 98.3 1.5E-06 5.1E-11 80.8 9.0 171 31-276 60-243 (300)
123 4a7p_A UDP-glucose dehydrogena 98.3 3.1E-06 1.1E-10 83.3 11.7 119 166-288 9-145 (446)
124 3mog_A Probable 3-hydroxybutyr 98.3 1.6E-06 5.3E-11 86.3 9.6 131 166-303 6-148 (483)
125 1jay_A Coenzyme F420H2:NADP+ o 98.3 2.3E-06 7.9E-11 75.0 8.9 122 167-303 2-136 (212)
126 3k96_A Glycerol-3-phosphate de 98.3 3.8E-06 1.3E-10 80.3 11.0 111 165-279 29-140 (356)
127 1bg6_A N-(1-D-carboxylethyl)-L 98.3 2.6E-06 8.8E-11 80.6 9.6 118 166-288 5-124 (359)
128 1edz_A 5,10-methylenetetrahydr 98.3 1.8E-06 6.1E-11 81.2 8.1 97 160-275 172-278 (320)
129 3u62_A Shikimate dehydrogenase 98.3 6E-06 2E-10 75.2 11.4 105 163-289 107-214 (253)
130 2o3j_A UDP-glucose 6-dehydroge 98.2 5.1E-06 1.7E-10 82.6 11.3 121 166-288 10-151 (481)
131 3don_A Shikimate dehydrogenase 98.2 3.4E-06 1.2E-10 77.9 9.3 108 162-288 114-224 (277)
132 2rcy_A Pyrroline carboxylate r 98.2 2.8E-06 9.6E-11 76.9 8.2 99 165-289 4-106 (262)
133 1dlj_A UDP-glucose dehydrogena 98.2 5.7E-06 1.9E-10 80.3 10.6 115 167-289 2-134 (402)
134 1x0v_A GPD-C, GPDH-C, glycerol 98.2 3.6E-06 1.2E-10 79.7 8.9 107 166-276 9-128 (354)
135 2egg_A AROE, shikimate 5-dehyd 98.2 1.8E-05 6.3E-10 73.6 13.3 116 162-291 138-257 (297)
136 1zcj_A Peroxisomal bifunctiona 98.2 6.2E-06 2.1E-10 81.5 10.4 141 165-311 37-188 (463)
137 3ojo_A CAP5O; rossmann fold, c 98.2 6.8E-06 2.3E-10 80.4 10.5 110 163-286 9-143 (431)
138 3g79_A NDP-N-acetyl-D-galactos 98.2 5.2E-06 1.8E-10 82.3 9.7 116 166-284 19-159 (478)
139 1evy_A Glycerol-3-phosphate de 98.2 1.6E-06 5.4E-11 82.8 5.6 108 167-277 17-129 (366)
140 1y81_A Conserved hypothetical 98.1 2.2E-06 7.5E-11 70.9 5.4 104 162-292 11-118 (138)
141 2y0c_A BCEC, UDP-glucose dehyd 98.1 1.2E-05 4E-10 79.9 11.2 118 166-287 9-143 (478)
142 1x7d_A Ornithine cyclodeaminas 98.1 1.7E-05 5.8E-10 75.6 11.5 99 164-273 128-227 (350)
143 1txg_A Glycerol-3-phosphate de 98.1 7.8E-06 2.7E-10 76.6 9.0 115 167-288 2-124 (335)
144 3hdj_A Probable ornithine cycl 98.1 2.2E-05 7.6E-10 73.6 11.9 94 165-274 121-215 (313)
145 1yj8_A Glycerol-3-phosphate de 98.1 4.8E-06 1.7E-10 79.8 7.4 107 166-275 22-144 (375)
146 4huj_A Uncharacterized protein 98.1 9E-06 3.1E-10 72.1 8.3 93 165-275 23-116 (220)
147 1vl6_A Malate oxidoreductase; 98.1 3.1E-05 1.1E-09 74.2 12.3 137 161-313 188-334 (388)
148 1wdk_A Fatty oxidation complex 98.1 8E-06 2.7E-10 84.9 8.8 130 166-301 315-455 (715)
149 2duw_A Putative COA-binding pr 98.0 2.4E-06 8.3E-11 71.2 3.3 105 165-294 13-121 (145)
150 1ks9_A KPA reductase;, 2-dehyd 98.0 8.8E-06 3E-10 74.4 7.2 96 167-275 2-100 (291)
151 1z82_A Glycerol-3-phosphate de 98.0 7.5E-06 2.5E-10 77.2 6.6 100 165-275 14-114 (335)
152 2wtb_A MFP2, fatty acid multif 98.0 1.4E-05 4.7E-10 83.3 9.2 130 166-301 313-453 (725)
153 3c85_A Putative glutathione-re 98.0 3.5E-06 1.2E-10 72.3 3.8 101 161-273 35-140 (183)
154 2dc1_A L-aspartate dehydrogena 98.0 1.4E-05 4.8E-10 71.6 7.8 97 167-291 2-103 (236)
155 2ew2_A 2-dehydropantoate 2-red 97.9 1E-05 3.4E-10 74.8 6.2 120 166-292 4-127 (316)
156 1omo_A Alanine dehydrogenase; 97.9 5.3E-05 1.8E-09 71.3 11.1 93 164-272 124-217 (322)
157 3phh_A Shikimate dehydrogenase 97.9 4.4E-05 1.5E-09 70.1 9.8 106 165-289 118-224 (269)
158 2i76_A Hypothetical protein; N 97.9 5.6E-06 1.9E-10 76.0 3.8 87 166-274 3-91 (276)
159 2z2v_A Hypothetical protein PH 97.9 1.1E-05 3.8E-10 77.3 5.4 115 162-292 13-127 (365)
160 2g1u_A Hypothetical protein TM 97.8 0.00013 4.4E-09 60.7 10.2 104 159-275 13-121 (155)
161 3dfu_A Uncharacterized protein 97.8 1.5E-05 5.1E-10 71.6 4.5 70 165-272 6-75 (232)
162 2qyt_A 2-dehydropantoate 2-red 97.8 2.8E-05 9.5E-10 72.1 6.5 116 166-288 9-132 (317)
163 3ado_A Lambda-crystallin; L-gu 97.8 9.3E-05 3.2E-09 69.5 9.7 143 165-311 6-161 (319)
164 3fwz_A Inner membrane protein 97.7 2.9E-05 9.8E-10 63.7 5.3 94 165-271 7-104 (140)
165 3ulk_A Ketol-acid reductoisome 97.7 9E-05 3.1E-09 72.0 9.1 100 161-275 33-134 (491)
166 2a9f_A Putative malic enzyme ( 97.7 0.0001 3.6E-09 70.8 9.2 165 109-313 156-329 (398)
167 1lss_A TRK system potassium up 97.7 0.00015 5E-09 58.4 8.8 95 165-271 4-102 (140)
168 3ghy_A Ketopantoate reductase 97.7 4.7E-05 1.6E-09 71.8 6.0 103 165-274 3-106 (335)
169 3o8q_A Shikimate 5-dehydrogena 97.6 0.00013 4.4E-09 67.4 8.6 114 161-289 122-237 (281)
170 3ic5_A Putative saccharopine d 97.6 5.4E-05 1.9E-09 59.2 5.3 93 164-272 4-100 (118)
171 3hwr_A 2-dehydropantoate 2-red 97.6 0.0001 3.5E-09 69.0 7.7 116 163-286 17-133 (318)
172 3jyo_A Quinate/shikimate dehyd 97.6 0.00076 2.6E-08 62.2 13.4 120 162-290 124-246 (283)
173 3tnl_A Shikimate dehydrogenase 97.6 0.0003 1E-08 66.0 10.7 121 161-289 150-279 (315)
174 3i83_A 2-dehydropantoate 2-red 97.6 0.00014 4.8E-09 68.0 8.3 120 166-293 3-125 (320)
175 1p77_A Shikimate 5-dehydrogena 97.6 0.00014 4.8E-09 66.6 8.0 114 162-289 116-231 (272)
176 1nyt_A Shikimate 5-dehydrogena 97.6 0.00041 1.4E-08 63.4 11.1 113 162-289 116-230 (271)
177 4b4u_A Bifunctional protein fo 97.6 0.00032 1.1E-08 65.0 10.1 168 31-273 76-252 (303)
178 2hmt_A YUAA protein; RCK, KTN, 97.5 9.9E-05 3.4E-09 59.7 5.5 100 163-275 4-107 (144)
179 2dvm_A Malic enzyme, 439AA lon 97.5 0.00021 7.2E-09 69.9 8.4 139 161-312 182-335 (439)
180 3hn2_A 2-dehydropantoate 2-red 97.5 0.00038 1.3E-08 64.8 9.8 120 166-294 3-124 (312)
181 3pwz_A Shikimate dehydrogenase 97.5 0.00081 2.8E-08 61.7 11.6 113 161-289 116-231 (272)
182 3llv_A Exopolyphosphatase-rela 97.5 9.3E-05 3.2E-09 60.3 4.7 95 164-271 5-103 (141)
183 3c7a_A Octopine dehydrogenase; 97.5 0.00031 1E-08 67.7 8.8 103 166-271 3-115 (404)
184 1id1_A Putative potassium chan 97.5 0.0002 7E-09 59.3 6.5 102 165-274 3-107 (153)
185 1iuk_A Hypothetical protein TT 97.4 0.00027 9.1E-09 58.3 6.5 105 164-293 12-120 (140)
186 1guz_A Malate dehydrogenase; o 97.4 0.00046 1.6E-08 64.4 8.5 103 167-273 2-119 (310)
187 3uuw_A Putative oxidoreductase 97.4 0.00082 2.8E-08 62.2 10.2 107 166-290 7-117 (308)
188 1vlv_A Otcase, ornithine carba 97.4 0.042 1.4E-06 51.5 21.7 115 162-280 164-296 (325)
189 1pvv_A Otcase, ornithine carba 97.4 0.04 1.4E-06 51.4 21.5 115 162-280 152-282 (315)
190 3vtf_A UDP-glucose 6-dehydroge 97.3 0.00077 2.6E-08 66.0 10.1 122 164-288 20-161 (444)
191 3r7f_A Aspartate carbamoyltran 97.3 0.016 5.4E-07 53.8 18.5 99 162-278 144-259 (304)
192 1duv_G Octase-1, ornithine tra 97.3 0.018 6.1E-07 54.2 18.8 193 29-272 62-274 (333)
193 1nvt_A Shikimate 5'-dehydrogen 97.3 0.00061 2.1E-08 62.7 8.7 117 162-288 125-244 (287)
194 3t4e_A Quinate/shikimate dehyd 97.3 0.0016 5.5E-08 60.9 11.4 120 161-289 144-273 (312)
195 2i6u_A Otcase, ornithine carba 97.3 0.0092 3.1E-07 55.5 16.3 148 105-280 112-276 (307)
196 1tlt_A Putative oxidoreductase 97.3 0.0012 4.2E-08 61.3 10.5 109 166-292 6-118 (319)
197 3fbt_A Chorismate mutase and s 97.3 0.0013 4.4E-08 60.7 10.3 109 161-289 118-230 (282)
198 2d59_A Hypothetical protein PH 97.3 0.00042 1.4E-08 57.4 6.3 103 165-294 22-128 (144)
199 4hkt_A Inositol 2-dehydrogenas 97.3 0.0014 4.8E-08 61.2 10.7 69 166-248 4-75 (331)
200 2ef0_A Ornithine carbamoyltran 97.3 0.035 1.2E-06 51.4 19.9 190 29-280 63-272 (301)
201 2ewd_A Lactate dehydrogenase,; 97.2 0.00041 1.4E-08 64.9 6.4 117 165-286 4-135 (317)
202 1dxh_A Ornithine carbamoyltran 97.2 0.0044 1.5E-07 58.3 13.4 107 162-272 152-274 (335)
203 2ho3_A Oxidoreductase, GFO/IDH 97.2 0.0017 5.8E-08 60.5 10.5 68 167-246 3-72 (325)
204 4fgw_A Glycerol-3-phosphate de 97.2 0.00076 2.6E-08 65.0 8.1 107 167-275 36-154 (391)
205 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.0009 3.1E-08 59.6 7.6 97 160-273 26-122 (223)
206 1pzg_A LDH, lactate dehydrogen 97.1 0.0019 6.4E-08 60.9 10.1 76 166-244 10-86 (331)
207 4ep1_A Otcase, ornithine carba 97.1 0.01 3.5E-07 55.9 14.9 114 163-280 177-305 (340)
208 3c1a_A Putative oxidoreductase 97.1 0.00084 2.9E-08 62.4 7.5 104 166-289 11-119 (315)
209 1ml4_A Aspartate transcarbamoy 97.1 0.021 7.1E-07 53.1 16.7 106 162-275 152-272 (308)
210 3db2_A Putative NADPH-dependen 97.1 0.0016 5.4E-08 61.6 9.2 70 166-249 6-79 (354)
211 3cea_A MYO-inositol 2-dehydrog 97.1 0.002 6.9E-08 60.4 9.9 69 166-246 9-81 (346)
212 3euw_A MYO-inositol dehydrogen 97.1 0.0014 4.9E-08 61.5 8.7 70 166-248 5-77 (344)
213 3e9m_A Oxidoreductase, GFO/IDH 97.1 0.0022 7.4E-08 60.0 9.9 71 166-248 6-79 (330)
214 2glx_A 1,5-anhydro-D-fructose 97.1 0.0023 7.8E-08 59.6 9.9 67 167-246 2-72 (332)
215 3tpf_A Otcase, ornithine carba 97.1 0.048 1.7E-06 50.6 18.6 115 162-280 142-273 (307)
216 3gd5_A Otcase, ornithine carba 97.0 0.068 2.3E-06 50.0 19.5 115 162-280 154-284 (323)
217 4a8p_A Putrescine carbamoyltra 97.0 0.078 2.7E-06 50.2 20.1 114 162-280 150-281 (355)
218 1pg5_A Aspartate carbamoyltran 97.0 0.03 1E-06 51.9 16.9 103 162-275 146-264 (299)
219 1oth_A Protein (ornithine tran 97.0 0.012 4E-07 55.1 14.2 140 105-272 119-271 (321)
220 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0028 9.6E-08 59.0 9.9 110 166-292 3-116 (323)
221 4amu_A Ornithine carbamoyltran 97.0 0.015 5.3E-07 55.2 15.0 106 163-272 178-300 (365)
222 3q2i_A Dehydrogenase; rossmann 97.0 0.0016 5.4E-08 61.5 8.1 69 166-247 14-86 (354)
223 3e18_A Oxidoreductase; dehydro 97.0 0.0017 5.9E-08 61.5 8.4 67 166-247 6-76 (359)
224 1hyh_A L-hicdh, L-2-hydroxyiso 97.0 0.0034 1.2E-07 58.3 10.2 76 166-246 2-79 (309)
225 4a8t_A Putrescine carbamoyltra 97.0 0.073 2.5E-06 50.1 19.1 114 162-280 172-303 (339)
226 2w37_A Ornithine carbamoyltran 97.0 0.042 1.4E-06 52.0 17.5 107 162-272 173-295 (359)
227 4f2g_A Otcase 1, ornithine car 97.0 0.041 1.4E-06 51.2 17.1 109 162-280 151-275 (309)
228 3ezy_A Dehydrogenase; structur 96.9 0.0022 7.5E-08 60.3 8.6 70 166-247 3-75 (344)
229 3mz0_A Inositol 2-dehydrogenas 96.9 0.0026 8.7E-08 59.8 8.9 72 166-248 3-78 (344)
230 3q2o_A Phosphoribosylaminoimid 96.9 0.00092 3.2E-08 64.0 5.9 39 161-200 10-48 (389)
231 1a5z_A L-lactate dehydrogenase 96.9 0.0037 1.3E-07 58.4 9.8 122 166-294 1-140 (319)
232 3rc1_A Sugar 3-ketoreductase; 96.9 0.0033 1.1E-07 59.4 9.5 70 165-247 27-100 (350)
233 4h31_A Otcase, ornithine carba 96.9 0.11 3.6E-06 49.4 19.8 108 161-272 177-300 (358)
234 3g17_A Similar to 2-dehydropan 96.9 0.00024 8.1E-09 65.7 1.1 99 166-278 3-102 (294)
235 3abi_A Putative uncharacterize 96.9 0.0019 6.6E-08 61.3 7.5 72 165-246 16-87 (365)
236 3l4b_C TRKA K+ channel protien 96.9 0.0017 5.7E-08 57.0 6.5 96 167-273 2-100 (218)
237 3fef_A Putative glucosidase LP 96.9 0.0033 1.1E-07 61.7 9.2 115 165-285 5-159 (450)
238 3zwc_A Peroxisomal bifunctiona 96.8 0.0073 2.5E-07 62.8 12.0 141 166-311 317-467 (742)
239 2hjr_A Malate dehydrogenase; m 96.8 0.0032 1.1E-07 59.2 8.5 76 166-245 15-91 (328)
240 2v6b_A L-LDH, L-lactate dehydr 96.8 0.0024 8.2E-08 59.3 7.6 123 166-294 1-138 (304)
241 3evn_A Oxidoreductase, GFO/IDH 96.8 0.0022 7.5E-08 60.0 7.3 70 166-247 6-78 (329)
242 1jw9_B Molybdopterin biosynthe 96.8 0.00091 3.1E-08 60.4 4.5 96 161-261 27-145 (249)
243 1ydw_A AX110P-like protein; st 96.8 0.0089 3E-07 56.5 11.6 113 166-292 7-124 (362)
244 3csu_A Protein (aspartate carb 96.8 0.03 1E-06 52.1 14.8 111 162-280 151-276 (310)
245 3rui_A Ubiquitin-like modifier 96.8 0.0029 1E-07 59.7 7.9 104 161-272 30-171 (340)
246 3e82_A Putative oxidoreductase 96.8 0.0072 2.5E-07 57.3 10.7 66 166-247 8-78 (364)
247 1t2d_A LDH-P, L-lactate dehydr 96.7 0.0046 1.6E-07 58.0 8.9 76 166-245 5-81 (322)
248 1f06_A MESO-diaminopimelate D- 96.7 0.0039 1.3E-07 58.3 8.4 103 166-290 4-110 (320)
249 3ec7_A Putative dehydrogenase; 96.7 0.0044 1.5E-07 58.6 8.9 72 166-248 24-99 (357)
250 2axq_A Saccharopine dehydrogen 96.7 0.0026 8.9E-08 62.8 7.4 101 159-272 17-119 (467)
251 3bio_A Oxidoreductase, GFO/IDH 96.7 0.0022 7.6E-08 59.5 6.6 104 166-290 10-117 (304)
252 1npy_A Hypothetical shikimate 96.7 0.0088 3E-07 54.6 10.5 104 164-288 118-227 (271)
253 3grf_A Ornithine carbamoyltran 96.7 0.18 6.1E-06 47.2 19.5 118 161-280 157-294 (328)
254 3m2t_A Probable dehydrogenase; 96.7 0.0036 1.2E-07 59.4 8.0 68 166-246 6-78 (359)
255 1obb_A Maltase, alpha-glucosid 96.7 0.0038 1.3E-07 61.7 8.2 128 165-295 3-174 (480)
256 2we8_A Xanthine dehydrogenase; 96.7 0.0032 1.1E-07 60.5 7.5 93 165-295 204-302 (386)
257 3l9w_A Glutathione-regulated p 96.7 0.0017 5.7E-08 63.1 5.5 97 165-273 4-103 (413)
258 1yqd_A Sinapyl alcohol dehydro 96.6 0.003 1E-07 60.0 6.9 97 164-274 187-284 (366)
259 1ldn_A L-lactate dehydrogenase 96.6 0.0045 1.5E-07 57.8 8.0 108 165-279 6-128 (316)
260 3qy9_A DHPR, dihydrodipicolina 96.6 0.0043 1.5E-07 55.9 7.5 82 166-275 4-86 (243)
261 3ego_A Probable 2-dehydropanto 96.6 0.0029 1E-07 58.7 6.5 118 166-294 3-120 (307)
262 1j5p_A Aspartate dehydrogenase 96.6 0.0038 1.3E-07 56.5 6.9 99 164-291 11-113 (253)
263 2nu8_A Succinyl-COA ligase [AD 96.6 0.0042 1.4E-07 57.3 7.3 106 165-292 7-117 (288)
264 3aog_A Glutamate dehydrogenase 96.6 0.056 1.9E-06 52.6 15.5 117 161-292 231-358 (440)
265 2aef_A Calcium-gated potassium 96.6 0.0018 6E-08 57.4 4.6 92 165-270 9-103 (234)
266 3ohs_X Trans-1,2-dihydrobenzen 96.5 0.0073 2.5E-07 56.4 8.9 69 166-247 3-77 (334)
267 2vt3_A REX, redox-sensing tran 96.5 0.0022 7.5E-08 56.7 4.8 68 166-246 86-155 (215)
268 1hdg_O Holo-D-glyceraldehyde-3 96.5 0.0054 1.8E-07 57.8 7.6 32 166-197 1-34 (332)
269 1u8f_O GAPDH, glyceraldehyde-3 96.4 0.0075 2.6E-07 56.9 8.2 31 166-196 4-34 (335)
270 1lld_A L-lactate dehydrogenase 96.4 0.018 6.1E-07 53.2 10.6 105 165-275 7-127 (319)
271 1oju_A MDH, malate dehydrogena 96.4 0.018 6.1E-07 53.3 10.3 124 167-297 2-147 (294)
272 3kux_A Putative oxidoreductase 96.3 0.0081 2.8E-07 56.6 8.0 68 166-249 8-80 (352)
273 3vku_A L-LDH, L-lactate dehydr 96.3 0.0098 3.4E-07 55.8 8.4 108 164-279 8-130 (326)
274 3ldh_A Lactate dehydrogenase; 96.3 0.007 2.4E-07 56.9 7.4 109 164-279 20-143 (330)
275 3gdo_A Uncharacterized oxidore 96.3 0.0081 2.8E-07 56.8 7.8 67 166-248 6-77 (358)
276 3on5_A BH1974 protein; structu 96.3 0.0051 1.8E-07 58.5 6.3 92 166-296 200-293 (362)
277 4ekn_B Aspartate carbamoyltran 96.3 0.075 2.6E-06 49.3 14.0 104 162-275 148-267 (306)
278 4had_A Probable oxidoreductase 96.3 0.012 4.1E-07 55.1 8.8 69 167-247 25-97 (350)
279 3orq_A N5-carboxyaminoimidazol 96.3 0.004 1.4E-07 59.4 5.5 71 162-242 9-79 (377)
280 1zq6_A Otcase, ornithine carba 96.3 0.24 8.3E-06 46.9 17.6 113 163-280 188-326 (359)
281 3sds_A Ornithine carbamoyltran 96.3 0.43 1.5E-05 45.1 19.3 110 161-272 184-308 (353)
282 1piw_A Hypothetical zinc-type 96.3 0.0066 2.2E-07 57.4 6.9 97 164-273 179-277 (360)
283 1zud_1 Adenylyltransferase THI 96.3 0.0043 1.5E-07 56.0 5.3 96 161-261 24-142 (251)
284 2tmg_A Protein (glutamate dehy 96.3 0.16 5.6E-06 49.0 16.6 118 160-292 204-333 (415)
285 3tl2_A Malate dehydrogenase; c 96.2 0.018 6.1E-07 53.8 9.6 112 164-281 7-134 (315)
286 2czc_A Glyceraldehyde-3-phosph 96.2 0.01 3.6E-07 55.7 8.0 78 167-247 4-90 (334)
287 4a7p_A UDP-glucose dehydrogena 96.2 0.018 6.1E-07 56.4 9.9 104 160-283 317-431 (446)
288 3two_A Mannitol dehydrogenase; 96.2 0.0069 2.4E-07 56.9 6.7 93 164-275 176-268 (348)
289 2cdc_A Glucose dehydrogenase g 96.2 0.004 1.4E-07 59.0 5.0 99 162-273 178-279 (366)
290 3nep_X Malate dehydrogenase; h 96.2 0.018 6E-07 53.8 9.3 108 167-281 2-125 (314)
291 3tum_A Shikimate dehydrogenase 96.2 0.037 1.3E-06 50.5 11.2 118 161-289 121-241 (269)
292 3ip1_A Alcohol dehydrogenase, 96.2 0.013 4.6E-07 56.2 8.7 96 164-273 213-319 (404)
293 4fcc_A Glutamate dehydrogenase 96.2 0.031 1.1E-06 54.5 11.2 119 161-292 231-368 (450)
294 2d8a_A PH0655, probable L-thre 96.2 0.0057 2E-07 57.4 5.9 95 164-273 167-268 (348)
295 4gsl_A Ubiquitin-like modifier 96.2 0.01 3.5E-07 60.1 7.9 139 111-272 286-463 (615)
296 1ur5_A Malate dehydrogenase; o 96.2 0.014 4.9E-07 54.1 8.5 107 166-279 3-124 (309)
297 3cmc_O GAPDH, glyceraldehyde-3 96.1 0.0082 2.8E-07 56.6 6.8 31 167-197 3-33 (334)
298 1cdo_A Alcohol dehydrogenase; 96.1 0.024 8.1E-07 53.7 10.1 95 164-273 192-295 (374)
299 1h6d_A Precursor form of gluco 96.1 0.0095 3.3E-07 58.0 7.5 72 166-246 84-160 (433)
300 3f4l_A Putative oxidoreductase 96.1 0.0048 1.6E-07 58.0 5.2 70 166-248 3-77 (345)
301 3vh1_A Ubiquitin-like modifier 96.1 0.0092 3.1E-07 60.3 7.4 104 161-272 323-464 (598)
302 1lu9_A Methylene tetrahydromet 96.1 0.034 1.1E-06 50.8 10.6 80 162-246 116-198 (287)
303 4f3y_A DHPR, dihydrodipicolina 96.1 0.0096 3.3E-07 54.5 6.7 97 166-274 8-106 (272)
304 1xyg_A Putative N-acetyl-gamma 96.1 0.022 7.4E-07 54.2 9.3 97 165-273 16-113 (359)
305 2jhf_A Alcohol dehydrogenase E 96.1 0.026 8.7E-07 53.5 9.8 95 164-273 191-294 (374)
306 1pqw_A Polyketide synthase; ro 96.0 0.0084 2.9E-07 51.3 5.8 95 164-275 38-140 (198)
307 4ew6_A D-galactose-1-dehydroge 96.0 0.011 3.6E-07 55.5 6.9 61 166-246 26-91 (330)
308 2dt5_A AT-rich DNA-binding pro 96.0 0.0054 1.9E-07 54.0 4.6 67 166-246 81-150 (211)
309 3cps_A Glyceraldehyde 3-phosph 96.0 0.023 7.8E-07 53.9 9.2 31 166-196 18-48 (354)
310 1rjw_A ADH-HT, alcohol dehydro 96.0 0.011 3.8E-07 55.3 7.0 95 164-274 164-263 (339)
311 1pjq_A CYSG, siroheme synthase 96.0 0.009 3.1E-07 58.7 6.6 43 161-204 8-50 (457)
312 3moi_A Probable dehydrogenase; 96.0 0.015 5.1E-07 55.6 8.0 69 166-247 3-75 (387)
313 1p0f_A NADP-dependent alcohol 96.0 0.025 8.5E-07 53.5 9.5 95 164-273 191-294 (373)
314 4fb5_A Probable oxidoreductase 96.0 0.015 5.1E-07 55.0 7.9 70 166-248 26-106 (393)
315 3p7m_A Malate dehydrogenase; p 96.0 0.029 1E-06 52.5 9.7 109 165-280 5-128 (321)
316 3k92_A NAD-GDH, NAD-specific g 96.0 0.065 2.2E-06 51.9 12.4 114 161-291 217-342 (424)
317 1gad_O D-glyceraldehyde-3-phos 96.0 0.015 5.1E-07 54.7 7.7 32 167-198 3-34 (330)
318 1uuf_A YAHK, zinc-type alcohol 96.0 0.0085 2.9E-07 56.9 6.2 96 164-274 194-290 (369)
319 1u8x_X Maltose-6'-phosphate gl 96.0 0.0092 3.1E-07 58.9 6.4 129 165-295 28-194 (472)
320 1e3j_A NADP(H)-dependent ketos 96.0 0.033 1.1E-06 52.2 10.1 96 164-274 168-273 (352)
321 3uog_A Alcohol dehydrogenase; 96.0 0.012 4.2E-07 55.6 7.1 94 164-273 189-288 (363)
322 1pl8_A Human sorbitol dehydrog 96.0 0.017 6E-07 54.3 8.2 95 164-274 171-275 (356)
323 3s2e_A Zinc-containing alcohol 95.9 0.01 3.5E-07 55.5 6.4 94 164-272 166-263 (340)
324 1oi7_A Succinyl-COA synthetase 95.9 0.012 4.2E-07 54.2 6.8 105 165-292 7-117 (288)
325 1b7g_O Protein (glyceraldehyde 95.9 0.028 9.4E-07 53.1 9.4 80 167-247 3-88 (340)
326 3ijr_A Oxidoreductase, short c 95.9 0.034 1.1E-06 50.8 9.8 109 161-274 43-184 (291)
327 2dq4_A L-threonine 3-dehydroge 95.9 0.011 3.8E-07 55.3 6.6 93 164-273 164-263 (343)
328 3d6n_B Aspartate carbamoyltran 95.9 0.21 7.2E-06 45.9 15.0 69 162-246 143-214 (291)
329 3d0o_A L-LDH 1, L-lactate dehy 95.9 0.036 1.2E-06 51.6 10.1 108 165-279 6-128 (317)
330 3fhl_A Putative oxidoreductase 95.9 0.0097 3.3E-07 56.3 6.2 67 166-247 6-76 (362)
331 3pqe_A L-LDH, L-lactate dehydr 95.9 0.024 8.3E-07 53.1 8.9 99 165-273 5-123 (326)
332 2fzw_A Alcohol dehydrogenase c 95.9 0.025 8.5E-07 53.5 9.1 95 164-273 190-293 (373)
333 1ff9_A Saccharopine reductase; 95.9 0.0079 2.7E-07 59.0 5.7 76 164-247 2-79 (450)
334 3nv9_A Malic enzyme; rossmann 95.9 0.12 4E-06 50.5 13.5 170 108-313 186-367 (487)
335 1e3i_A Alcohol dehydrogenase, 95.9 0.034 1.2E-06 52.7 9.9 95 164-273 195-298 (376)
336 4ej6_A Putative zinc-binding d 95.9 0.012 4.3E-07 55.7 6.7 95 164-273 182-285 (370)
337 1iz0_A Quinone oxidoreductase; 95.9 0.0099 3.4E-07 54.6 5.8 92 164-273 125-219 (302)
338 3do5_A HOM, homoserine dehydro 95.9 0.018 6.2E-07 54.0 7.6 116 167-291 4-135 (327)
339 3e5r_O PP38, glyceraldehyde-3- 95.8 0.017 5.8E-07 54.4 7.4 30 167-196 5-34 (337)
340 4gqa_A NAD binding oxidoreduct 95.8 0.017 5.8E-07 55.5 7.5 70 166-247 27-107 (412)
341 2cf5_A Atccad5, CAD, cinnamyl 95.8 0.013 4.3E-07 55.4 6.5 96 164-273 180-276 (357)
342 3gg2_A Sugar dehydrogenase, UD 95.8 0.053 1.8E-06 53.1 10.9 97 161-275 314-421 (450)
343 3keo_A Redox-sensing transcrip 95.8 0.0088 3E-07 52.7 4.8 70 165-246 84-158 (212)
344 2yyy_A Glyceraldehyde-3-phosph 95.8 0.017 5.7E-07 54.7 7.0 30 166-195 3-32 (343)
345 3e8x_A Putative NAD-dependent 95.7 0.02 6.8E-07 50.2 7.1 77 161-247 17-95 (236)
346 3ojo_A CAP5O; rossmann fold, c 95.7 0.04 1.4E-06 53.7 9.8 88 162-276 312-410 (431)
347 2i6t_A Ubiquitin-conjugating e 95.7 0.0087 3E-07 55.6 4.9 99 165-273 14-126 (303)
348 3ijp_A DHPR, dihydrodipicolina 95.7 0.019 6.6E-07 52.9 7.1 98 166-274 22-121 (288)
349 3h8v_A Ubiquitin-like modifier 95.7 0.015 5.2E-07 53.7 6.3 38 161-199 32-70 (292)
350 4eye_A Probable oxidoreductase 95.7 0.017 5.8E-07 54.1 6.8 93 164-273 159-258 (342)
351 1y6j_A L-lactate dehydrogenase 95.7 0.028 9.6E-07 52.4 8.2 121 166-297 8-152 (318)
352 3i23_A Oxidoreductase, GFO/IDH 95.7 0.019 6.5E-07 54.0 7.0 69 166-247 3-76 (349)
353 1f8f_A Benzyl alcohol dehydrog 95.6 0.015 5.1E-07 55.0 6.2 95 164-273 190-290 (371)
354 1s6y_A 6-phospho-beta-glucosid 95.6 0.022 7.5E-07 55.8 7.6 127 166-294 8-174 (450)
355 3dty_A Oxidoreductase, GFO/IDH 95.6 0.027 9.1E-07 54.0 8.0 72 166-247 13-96 (398)
356 1js1_X Transcarbamylase; alpha 95.6 1 3.5E-05 42.0 18.4 137 105-280 131-286 (324)
357 1rm4_O Glyceraldehyde 3-phosph 95.6 0.023 7.9E-07 53.5 7.3 30 167-196 3-34 (337)
358 1zh8_A Oxidoreductase; TM0312, 95.6 0.034 1.1E-06 52.1 8.4 68 166-246 19-92 (340)
359 2fp4_A Succinyl-COA ligase [GD 95.6 0.021 7.3E-07 53.0 7.0 109 161-292 9-125 (305)
360 3r6d_A NAD-dependent epimerase 95.6 0.015 5.3E-07 50.4 5.7 101 165-275 5-110 (221)
361 2p2s_A Putative oxidoreductase 95.6 0.024 8.2E-07 52.8 7.3 69 166-247 5-77 (336)
362 3g79_A NDP-N-acetyl-D-galactos 95.6 0.024 8.2E-07 56.0 7.5 98 161-282 349-458 (478)
363 3fpc_A NADP-dependent alcohol 95.5 0.021 7.3E-07 53.5 6.9 94 164-272 166-266 (352)
364 2hcy_A Alcohol dehydrogenase 1 95.5 0.025 8.5E-07 53.0 7.2 95 164-273 169-270 (347)
365 3uko_A Alcohol dehydrogenase c 95.5 0.035 1.2E-06 52.7 8.3 95 164-273 193-296 (378)
366 2yfq_A Padgh, NAD-GDH, NAD-spe 95.5 0.12 4E-06 50.2 11.8 117 161-292 208-340 (421)
367 4dup_A Quinone oxidoreductase; 95.4 0.019 6.3E-07 54.1 6.0 94 164-273 167-266 (353)
368 1cf2_P Protein (glyceraldehyde 95.4 0.026 9E-07 53.1 7.0 81 167-247 3-89 (337)
369 3lk7_A UDP-N-acetylmuramoylala 95.4 0.024 8.2E-07 55.4 7.0 118 162-290 6-138 (451)
370 3o9z_A Lipopolysaccaride biosy 95.4 0.024 8.3E-07 52.5 6.7 67 166-246 4-82 (312)
371 4b7c_A Probable oxidoreductase 95.4 0.022 7.5E-07 53.0 6.4 97 164-275 149-251 (336)
372 2zqz_A L-LDH, L-lactate dehydr 95.4 0.037 1.3E-06 51.8 8.0 107 165-279 9-130 (326)
373 1kyq_A Met8P, siroheme biosynt 95.4 0.01 3.4E-07 54.4 3.9 40 160-200 8-47 (274)
374 3fi9_A Malate dehydrogenase; s 95.4 0.033 1.1E-06 52.6 7.6 113 163-284 6-136 (343)
375 1kol_A Formaldehyde dehydrogen 95.4 0.031 1.1E-06 53.3 7.5 100 164-273 185-301 (398)
376 3qwb_A Probable quinone oxidor 95.4 0.021 7.2E-07 53.1 6.2 94 164-273 148-248 (334)
377 3aoe_E Glutamate dehydrogenase 95.4 0.33 1.1E-05 46.9 14.6 114 161-292 214-337 (419)
378 3h9e_O Glyceraldehyde-3-phosph 95.3 0.021 7.3E-07 53.8 5.9 45 166-211 8-53 (346)
379 3vtf_A UDP-glucose 6-dehydroge 95.3 0.091 3.1E-06 51.3 10.6 89 162-274 330-428 (444)
380 3jyn_A Quinone oxidoreductase; 95.3 0.021 7.2E-07 53.0 5.9 94 164-273 140-240 (325)
381 4e4t_A Phosphoribosylaminoimid 95.3 0.018 6.3E-07 55.7 5.6 39 162-201 32-70 (419)
382 2d4a_B Malate dehydrogenase; a 95.3 0.068 2.3E-06 49.6 9.3 106 167-279 1-121 (308)
383 1v3u_A Leukotriene B4 12- hydr 95.3 0.027 9.2E-07 52.3 6.6 94 164-273 145-245 (333)
384 1ez4_A Lactate dehydrogenase; 95.3 0.049 1.7E-06 50.8 8.3 106 166-279 6-126 (318)
385 3gvi_A Malate dehydrogenase; N 95.3 0.063 2.2E-06 50.2 9.0 105 164-273 6-125 (324)
386 3b1j_A Glyceraldehyde 3-phosph 95.3 0.026 8.9E-07 53.2 6.3 30 167-196 4-35 (339)
387 3gms_A Putative NADPH:quinone 95.2 0.016 5.5E-07 54.1 4.9 94 164-273 144-244 (340)
388 2d2i_A Glyceraldehyde 3-phosph 95.2 0.026 8.7E-07 54.0 6.3 31 167-197 4-36 (380)
389 2nqt_A N-acetyl-gamma-glutamyl 95.2 0.092 3.1E-06 49.7 10.1 102 166-282 10-120 (352)
390 3oa2_A WBPB; oxidoreductase, s 95.2 0.029 1E-06 52.1 6.7 67 166-246 4-83 (318)
391 4h3v_A Oxidoreductase domain p 95.2 0.026 8.8E-07 53.2 6.4 71 166-248 7-87 (390)
392 3eag_A UDP-N-acetylmuramate:L- 95.2 0.047 1.6E-06 50.9 7.9 115 165-290 4-134 (326)
393 4aj2_A L-lactate dehydrogenase 95.2 0.067 2.3E-06 50.2 9.0 107 162-273 16-137 (331)
394 3m6i_A L-arabinitol 4-dehydrog 95.2 0.091 3.1E-06 49.3 9.9 97 164-273 179-284 (363)
395 2h6e_A ADH-4, D-arabinose 1-de 95.2 0.015 5.3E-07 54.4 4.5 95 164-273 170-270 (344)
396 3v2g_A 3-oxoacyl-[acyl-carrier 95.1 0.06 2.1E-06 48.6 8.3 108 161-273 27-166 (271)
397 2x5j_O E4PDH, D-erythrose-4-ph 95.1 0.042 1.4E-06 51.8 7.4 31 167-197 4-37 (339)
398 3u3x_A Oxidoreductase; structu 95.1 0.042 1.4E-06 51.9 7.5 69 166-247 27-99 (361)
399 1ys4_A Aspartate-semialdehyde 95.1 0.015 5.1E-07 55.1 4.3 102 166-273 9-115 (354)
400 4fs3_A Enoyl-[acyl-carrier-pro 95.1 0.086 3E-06 47.2 9.2 39 162-201 3-44 (256)
401 2dph_A Formaldehyde dismutase; 95.1 0.035 1.2E-06 53.0 6.8 100 164-274 185-301 (398)
402 4ina_A Saccharopine dehydrogen 95.1 0.036 1.2E-06 53.4 6.9 78 166-246 2-86 (405)
403 2c0c_A Zinc binding alcohol de 95.0 0.022 7.6E-07 53.8 5.3 94 164-273 163-262 (362)
404 2ixa_A Alpha-N-acetylgalactosa 95.0 0.052 1.8E-06 52.8 8.0 75 166-247 21-102 (444)
405 1vkn_A N-acetyl-gamma-glutamyl 95.0 0.1 3.5E-06 49.3 9.7 101 164-278 12-113 (351)
406 3v5n_A Oxidoreductase; structu 95.0 0.088 3E-06 50.7 9.5 73 166-248 38-122 (417)
407 1nvm_B Acetaldehyde dehydrogen 95.0 0.051 1.8E-06 50.5 7.5 69 166-245 5-80 (312)
408 1vj0_A Alcohol dehydrogenase, 95.0 0.033 1.1E-06 52.9 6.4 94 164-273 195-299 (380)
409 2ozp_A N-acetyl-gamma-glutamyl 95.0 0.05 1.7E-06 51.4 7.5 95 166-273 5-100 (345)
410 3r3s_A Oxidoreductase; structu 95.0 0.1 3.5E-06 47.6 9.5 38 161-199 45-83 (294)
411 1y8q_A Ubiquitin-like 1 activa 95.0 0.035 1.2E-06 52.4 6.3 95 161-260 32-148 (346)
412 2y0c_A BCEC, UDP-glucose dehyd 95.0 0.16 5.5E-06 50.0 11.4 110 161-282 324-447 (478)
413 3q98_A Transcarbamylase; rossm 94.9 1.2 4E-05 42.7 16.9 106 162-271 188-333 (399)
414 3upl_A Oxidoreductase; rossman 94.8 0.082 2.8E-06 51.6 8.7 122 166-292 24-160 (446)
415 3hhp_A Malate dehydrogenase; M 94.8 0.14 4.9E-06 47.5 10.0 108 167-283 2-127 (312)
416 2ph5_A Homospermidine synthase 94.8 0.019 6.4E-07 56.5 4.0 94 165-273 13-115 (480)
417 3btv_A Galactose/lactose metab 94.8 0.04 1.4E-06 53.6 6.4 70 166-246 21-99 (438)
418 3ff4_A Uncharacterized protein 94.7 0.028 9.6E-07 45.0 4.3 100 166-293 5-108 (122)
419 2nvw_A Galactose/lactose metab 94.7 0.083 2.8E-06 52.0 8.5 70 166-246 40-118 (479)
420 3tqh_A Quinone oxidoreductase; 94.7 0.025 8.5E-07 52.4 4.4 93 164-273 152-246 (321)
421 1mld_A Malate dehydrogenase; o 94.7 0.12 4E-06 48.1 9.0 104 167-281 2-124 (314)
422 3ip3_A Oxidoreductase, putativ 94.6 0.03 1E-06 52.3 5.0 72 166-246 3-77 (337)
423 3oig_A Enoyl-[acyl-carrier-pro 94.6 0.2 6.9E-06 44.5 10.2 38 162-200 4-44 (266)
424 2rir_A Dipicolinate synthase, 94.6 0.17 5.8E-06 46.4 9.9 109 163-294 5-123 (300)
425 2q3e_A UDP-glucose 6-dehydroge 94.6 0.14 4.9E-06 50.1 9.9 110 162-279 326-448 (467)
426 3is3_A 17BETA-hydroxysteroid d 94.5 0.085 2.9E-06 47.4 7.5 109 161-274 14-154 (270)
427 2vn8_A Reticulon-4-interacting 94.5 0.14 4.9E-06 48.3 9.5 96 164-274 183-282 (375)
428 2yv1_A Succinyl-COA ligase [AD 94.5 0.04 1.4E-06 50.9 5.4 104 167-292 15-123 (294)
429 2g82_O GAPDH, glyceraldehyde-3 94.5 0.04 1.4E-06 51.7 5.5 30 167-197 2-31 (331)
430 2eih_A Alcohol dehydrogenase; 94.5 0.052 1.8E-06 50.7 6.3 93 164-273 166-266 (343)
431 1qor_A Quinone oxidoreductase; 94.5 0.046 1.6E-06 50.6 5.8 93 164-273 140-240 (327)
432 3h5n_A MCCB protein; ubiquitin 94.5 0.04 1.4E-06 52.2 5.4 37 161-198 114-151 (353)
433 1lc0_A Biliverdin reductase A; 94.5 0.046 1.6E-06 50.2 5.7 62 166-246 8-75 (294)
434 2j8z_A Quinone oxidoreductase; 94.4 0.056 1.9E-06 50.8 6.3 93 164-273 162-262 (354)
435 3pi7_A NADH oxidoreductase; gr 94.4 0.076 2.6E-06 49.6 7.1 93 165-273 165-264 (349)
436 2yfk_A Aspartate/ornithine car 94.4 0.15 5.1E-06 49.3 9.2 106 163-272 186-331 (418)
437 3i6i_A Putative leucoanthocyan 94.4 0.067 2.3E-06 49.7 6.7 78 164-246 9-93 (346)
438 2xxj_A L-LDH, L-lactate dehydr 94.4 0.074 2.5E-06 49.4 6.9 106 166-279 1-121 (310)
439 3qvo_A NMRA family protein; st 94.3 0.025 8.7E-07 49.7 3.5 102 163-276 21-128 (236)
440 2b5w_A Glucose dehydrogenase; 94.3 0.04 1.4E-06 51.8 5.1 94 164-273 172-274 (357)
441 4gmf_A Yersiniabactin biosynth 94.3 0.039 1.3E-06 52.7 5.0 68 165-247 7-77 (372)
442 3fbg_A Putative arginate lyase 94.3 0.066 2.3E-06 50.0 6.5 93 164-272 150-248 (346)
443 2pd4_A Enoyl-[acyl-carrier-pro 94.3 0.048 1.7E-06 49.1 5.3 37 163-200 4-43 (275)
444 2j3h_A NADP-dependent oxidored 94.3 0.057 1.9E-06 50.3 6.0 95 164-273 155-256 (345)
445 2ejw_A HDH, homoserine dehydro 94.2 0.043 1.5E-06 51.6 5.0 101 167-289 5-116 (332)
446 1lnq_A MTHK channels, potassiu 94.2 0.039 1.3E-06 51.4 4.8 91 165-269 115-208 (336)
447 3k31_A Enoyl-(acyl-carrier-pro 94.2 0.076 2.6E-06 48.5 6.7 39 161-200 26-67 (296)
448 1mv8_A GMD, GDP-mannose 6-dehy 94.2 0.14 4.7E-06 49.7 8.8 98 164-274 312-421 (436)
449 1dih_A Dihydrodipicolinate red 94.2 0.02 6.9E-07 52.3 2.6 74 166-245 6-81 (273)
450 3ew7_A LMO0794 protein; Q8Y8U8 94.2 0.14 4.7E-06 43.7 7.9 95 167-274 2-104 (221)
451 1yb5_A Quinone oxidoreductase; 94.2 0.057 2E-06 50.7 5.8 94 164-274 170-271 (351)
452 3pxx_A Carveol dehydrogenase; 94.2 0.22 7.6E-06 44.7 9.5 36 162-198 7-43 (287)
453 3jv7_A ADH-A; dehydrogenase, n 94.1 0.064 2.2E-06 50.0 6.0 93 164-272 171-270 (345)
454 1wly_A CAAR, 2-haloacrylate re 94.1 0.076 2.6E-06 49.2 6.4 93 164-273 145-245 (333)
455 3h2s_A Putative NADH-flavin re 94.0 0.2 6.8E-06 43.0 8.6 95 167-273 2-105 (224)
456 1v9l_A Glutamate dehydrogenase 94.0 0.13 4.3E-06 49.9 7.9 119 161-292 206-339 (421)
457 3dqp_A Oxidoreductase YLBE; al 94.0 0.12 4E-06 44.5 7.0 70 167-248 2-75 (219)
458 2p91_A Enoyl-[acyl-carrier-pro 93.9 0.13 4.6E-06 46.4 7.6 38 162-200 18-58 (285)
459 3mtj_A Homoserine dehydrogenas 93.9 0.089 3E-06 51.4 6.7 107 166-291 11-130 (444)
460 3r3j_A Glutamate dehydrogenase 93.9 0.32 1.1E-05 47.4 10.5 122 160-292 234-373 (456)
461 2yv2_A Succinyl-COA synthetase 93.9 0.084 2.9E-06 48.7 6.2 108 163-292 10-124 (297)
462 1tt5_B Ubiquitin-activating en 93.9 0.069 2.4E-06 52.0 5.8 98 162-261 37-153 (434)
463 1hdo_A Biliverdin IX beta redu 93.8 0.13 4.4E-06 43.3 6.8 73 165-247 3-78 (206)
464 3c8m_A Homoserine dehydrogenas 93.8 0.072 2.5E-06 49.9 5.6 116 166-290 7-140 (331)
465 2ep5_A 350AA long hypothetical 93.7 0.044 1.5E-06 51.8 4.1 30 166-195 5-35 (350)
466 2zb4_A Prostaglandin reductase 93.7 0.084 2.9E-06 49.5 6.0 92 166-273 162-261 (357)
467 2o3j_A UDP-glucose 6-dehydroge 93.7 0.59 2E-05 45.9 12.4 113 162-284 332-457 (481)
468 4g65_A TRK system potassium up 93.7 0.075 2.6E-06 52.1 5.8 74 165-246 3-78 (461)
469 3oqb_A Oxidoreductase; structu 93.7 0.09 3.1E-06 49.8 6.2 70 166-247 7-94 (383)
470 3edm_A Short chain dehydrogena 93.7 0.14 4.7E-06 45.7 7.0 37 162-199 5-43 (259)
471 3dhn_A NAD-dependent epimerase 93.6 0.082 2.8E-06 45.6 5.4 71 166-247 5-78 (227)
472 3gqv_A Enoyl reductase; medium 93.6 0.28 9.4E-06 46.3 9.4 94 163-272 163-263 (371)
473 3grk_A Enoyl-(acyl-carrier-pro 93.6 0.14 4.9E-06 46.6 7.2 38 162-200 28-68 (293)
474 3kzn_A Aotcase, N-acetylornith 93.6 2.5 8.6E-05 39.9 16.0 115 161-280 186-326 (359)
475 1qyc_A Phenylcoumaran benzylic 93.6 0.15 5E-06 46.1 7.2 77 165-246 4-87 (308)
476 3dr3_A N-acetyl-gamma-glutamyl 93.5 0.08 2.7E-06 49.8 5.5 101 166-275 5-109 (337)
477 1xq6_A Unknown protein; struct 93.4 0.16 5.5E-06 44.2 7.0 72 164-246 3-79 (253)
478 4a0s_A Octenoyl-COA reductase/ 93.3 0.15 5.1E-06 49.3 7.3 94 164-273 220-337 (447)
479 2x5o_A UDP-N-acetylmuramoylala 93.3 0.091 3.1E-06 51.0 5.6 115 163-289 3-129 (439)
480 1g0o_A Trihydroxynaphthalene r 93.3 0.22 7.5E-06 44.9 7.9 40 161-201 25-65 (283)
481 3slk_A Polyketide synthase ext 93.3 0.42 1.4E-05 50.1 10.9 118 163-300 344-468 (795)
482 1jvb_A NAD(H)-dependent alcoho 93.2 0.12 4.2E-06 48.1 6.3 102 164-281 170-283 (347)
483 2bma_A Glutamate dehydrogenase 93.2 0.73 2.5E-05 45.1 11.8 123 160-292 247-386 (470)
484 1smk_A Malate dehydrogenase, g 93.2 0.17 5.9E-06 47.1 7.2 103 165-279 8-130 (326)
485 1qsg_A Enoyl-[acyl-carrier-pro 93.2 0.097 3.3E-06 46.7 5.2 36 163-199 7-45 (265)
486 3goh_A Alcohol dehydrogenase, 93.1 0.04 1.4E-06 50.8 2.6 88 164-272 142-229 (315)
487 3mw9_A GDH 1, glutamate dehydr 93.1 0.67 2.3E-05 45.6 11.3 116 162-292 241-366 (501)
488 2bka_A CC3, TAT-interacting pr 93.1 0.068 2.3E-06 46.6 4.0 77 163-247 16-95 (242)
489 1h2b_A Alcohol dehydrogenase; 93.1 0.13 4.5E-06 48.3 6.2 37 164-201 186-223 (359)
490 1ebf_A Homoserine dehydrogenas 93.1 0.14 4.8E-06 48.5 6.4 32 167-198 6-41 (358)
491 2wyu_A Enoyl-[acyl carrier pro 93.0 0.073 2.5E-06 47.5 4.1 38 162-200 5-45 (261)
492 4a2c_A Galactitol-1-phosphate 93.0 0.27 9.2E-06 45.6 8.2 94 164-272 160-260 (346)
493 3gaz_A Alcohol dehydrogenase s 93.0 0.16 5.3E-06 47.4 6.5 93 164-275 150-249 (343)
494 3gpi_A NAD-dependent epimerase 93.0 0.09 3.1E-06 47.2 4.7 67 165-245 3-72 (286)
495 4dvj_A Putative zinc-dependent 93.0 0.24 8.4E-06 46.5 7.9 94 164-273 171-271 (363)
496 2x0j_A Malate dehydrogenase; o 92.9 0.39 1.3E-05 44.2 9.0 112 167-283 2-127 (294)
497 1qyd_A Pinoresinol-lariciresin 92.9 0.34 1.2E-05 43.7 8.6 77 165-247 4-87 (313)
498 3o38_A Short chain dehydrogena 92.8 0.097 3.3E-06 46.7 4.7 40 161-201 18-59 (266)
499 2gas_A Isoflavone reductase; N 92.7 0.26 8.8E-06 44.5 7.5 76 165-246 2-86 (307)
500 2wm3_A NMRA-like family domain 92.7 0.21 7E-06 45.1 6.8 73 165-245 5-81 (299)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=6.1e-65 Score=487.18 Aligned_cols=304 Identities=25% Similarity=0.382 Sum_probs=267.4
Q ss_pred eCCCCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHh-hccCCc
Q 019387 10 WNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGK 88 (342)
Q Consensus 10 ~~~~~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l-~~l~~k 88 (342)
..+++++|||++.+++++. ++.|++. +++++.. .+...+++++.+.+.+ +|+++++...++++++++++ |+| |
T Consensus 23 ~~~~~~~kvlv~~~~~~~~-~~~l~~~-~~v~~~~-~~~~~~~~~l~~~~~~-~d~li~~~~~~i~~~~l~~~~~~L--k 96 (345)
T 4g2n_A 23 MSTHPIQKAFLCRRFTPAI-EAELRQR-FDLEVNL-EDTVLTPSGIASRAHG-AEVLFVTATEAITAEVIRKLQPGL--K 96 (345)
T ss_dssp ----CCCEEEESSCCCHHH-HHHHHHH-SEEEECT-TCCCCCHHHHHHHTTT-CSEEEECTTSCBCHHHHHHTTTTC--C
T ss_pred cccCCCCEEEEeCCCCHHH-HHHHHcc-CCEEEec-CCCCCCHHHHHHHhcC-CeEEEEeCCCCCCHHHHHhhcCCc--e
Confidence 3456789999999998754 6778765 5877543 3445789999998885 99999987778999999998 676 9
Q ss_pred eEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeE
Q 019387 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (342)
Q Consensus 89 ~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktv 168 (342)
+|++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|..|.+....|.+|+||||
T Consensus 97 ~I~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktv 176 (345)
T 4g2n_A 97 TIATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRL 176 (345)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEE
T ss_pred EEEEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999988755556899999999
Q ss_pred EEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCc
Q 019387 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (342)
Q Consensus 169 gIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~ 248 (342)
||||+|+||+++|+++ ++|||+|++||+++...... . +.....++++++++||+|++|+|+++
T Consensus 177 GIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~-----------~-----g~~~~~~l~ell~~sDvV~l~~Plt~ 239 (345)
T 4g2n_A 177 GIFGMGRIGRAIATRA-RGFGLAIHYHNRTRLSHALE-----------E-----GAIYHDTLDSLLGASDIFLIAAPGRP 239 (345)
T ss_dssp EEESCSHHHHHHHHHH-HTTTCEEEEECSSCCCHHHH-----------T-----TCEECSSHHHHHHTCSEEEECSCCCG
T ss_pred EEEEeChhHHHHHHHH-HHCCCEEEEECCCCcchhhh-----------c-----CCeEeCCHHHHHhhCCEEEEecCCCH
Confidence 9999999999999997 89999999999986432111 0 12234699999999999999999999
Q ss_pred ccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCcccccccccccccc
Q 019387 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHISTQDRAT 319 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia~~~~~~ 319 (342)
+|+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++|| ||+++|||+|++|.+.
T Consensus 240 ~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~ 319 (345)
T 4g2n_A 240 ELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHET 319 (345)
T ss_dssp GGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHH
T ss_pred HHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999 7999999999999986
Q ss_pred ccccccCchhhcccccccc
Q 019387 320 SCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~ 338 (342)
. ..+.+..++|...+++
T Consensus 320 ~--~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 320 R--DAMGWLLIQGIEALNQ 336 (345)
T ss_dssp H--HHHHHHHHHHHHHHHT
T ss_pred H--HHHHHHHHHHHHHHHc
Confidence 5 7788888888887764
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.5e-64 Score=483.46 Aligned_cols=292 Identities=27% Similarity=0.383 Sum_probs=248.3
Q ss_pred eEEEEeCCCCch-H-HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEc
Q 019387 16 YRVVSTKPMPGT-R-WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 16 ~~vl~~~~~~~~-~-~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~ 93 (342)
|+||++.....+ . +.+.+++. .+++........+.+++. ++|+++++..+++++++++++|+| |+|++.
T Consensus 1 Mkil~~~~~~~~~p~~~e~l~~~--~~~~~~~~~~~~~~~~l~-----~ad~i~v~~~~~i~~~~l~~~p~L--k~I~~~ 71 (334)
T 3kb6_A 1 MNVLFTSVPQEDVPFYQEALKDL--SLKIYTTDVSKVPENELK-----KAELISVFVYDKLTEELLSKMPRL--KLIHTR 71 (334)
T ss_dssp -CEEECSCCTTHHHHHHHHTTTS--CEEECSSCGGGSCHHHHH-----HCSEEEECTTSCBCHHHHHTCTTC--CEEEES
T ss_pred CEEEEeCCCcccCHHHHHHHHhC--CcEEEeCCcccCCHHHhc-----CCCEEEEeCCCCCCHHHHhcCCCC--cEEEEC
Confidence 678887532222 1 22344444 344443333334555543 489999988889999999999987 999999
Q ss_pred cccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEec
Q 019387 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 ~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~ 173 (342)
|+|+||||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|..|.. ..+.+|+|+|+||||+
T Consensus 72 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~--~~~~~l~g~tvGIiG~ 149 (334)
T 3kb6_A 72 SVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSE--ILARELNRLTLGVIGT 149 (334)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGG--GCBCCGGGSEEEEECC
T ss_pred CcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccc--cccceecCcEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999876643 4578999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019387 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 174 G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~l 253 (342)
|+||+.+|+++ ++|||+|++||++....... .+ ....++++++++||+|++|+|+|++|+|+
T Consensus 150 G~IG~~va~~~-~~fg~~v~~~d~~~~~~~~~-----------~~------~~~~~l~ell~~sDivslh~Plt~~T~~l 211 (334)
T 3kb6_A 150 GRIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG------CVYTSLDELLKESDVISLHVPYTKETHHM 211 (334)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT------CEECCHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred chHHHHHHHhh-cccCceeeecCCccchhhhh-----------cC------ceecCHHHHHhhCCEEEEcCCCChhhccC
Confidence 99999999996 89999999999987543221 01 13469999999999999999999999999
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-------------------------CCccc
Q 019387 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-------------------------LGFSS 308 (342)
Q Consensus 254 i~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-------------------------~~~~~ 308 (342)
||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++|| ||+++
T Consensus 212 i~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvil 291 (334)
T 3kb6_A 212 INEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVII 291 (334)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEE
T ss_pred cCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEE
Confidence 99999999999999999999999999999999999999999999999997 48999
Q ss_pred cccccccccccccccccCchhhcccccccc
Q 019387 309 FKHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 309 tPhia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
|||+|++|.++. ..+.++.++|...+++
T Consensus 292 TPHia~~T~ea~--~~~~~~~~~ni~~~l~ 319 (334)
T 3kb6_A 292 TPHIAYYTDKSL--ERIREETVKVVKAFVK 319 (334)
T ss_dssp CCSCTTCBHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCchhhChHHHH--HHHHHHHHHHHHHHHc
Confidence 999999999865 7788888888887764
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.9e-62 Score=468.40 Aligned_cols=299 Identities=27% Similarity=0.390 Sum_probs=264.1
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 019387 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~ 94 (342)
++|||++.+++++ .++.|++.+ ++.+. ..+...+++++.+.+.+ +|+++++...++++++++++|++ |+|++.|
T Consensus 2 ~~kvlv~~~~~~~-~~~~l~~~~-~v~~~-~~~~~~~~~~~~~~~~~-~d~~i~~~~~~i~~~~l~~~~~L--k~I~~~~ 75 (330)
T 4e5n_A 2 LPKLVITHRVHEE-ILQLLAPHC-ELITN-QTDSTLTREEILRRCRD-AQAMMAFMPDRVDADFLQACPEL--RVIGCAL 75 (330)
T ss_dssp CCEEEECSCCCHH-HHHHHTTTC-EEECC-CSSSCCCHHHHHHHHTT-CSEEEECTTCCBCHHHHHHCTTC--CEEEESS
T ss_pred CCEEEEecCCCHH-HHHHHHhCC-eEEEe-cCCCCCCHHHHHHHhCC-CeEEEEeCCCCCCHHHHhhCCCC--cEEEECC
Confidence 5789999999875 478887765 77643 23345689999998885 99999977778999999999987 9999999
Q ss_pred ccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC
Q 019387 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G 174 (342)
+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|..|.+ ...|.+|+|+||||||+|
T Consensus 76 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~tvGIIG~G 154 (330)
T 4e5n_A 76 KGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQP-RFYGTGLDNATVGFLGMG 154 (330)
T ss_dssp SCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCS-CCCCCCSTTCEEEEECCS
T ss_pred CcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCc-cccCCccCCCEEEEEeeC
Confidence 9999999999999999999999999999999999999999999999999999999998876 345789999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019387 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li 254 (342)
+||+.+|+++ ++|||+|++||+++...... .. .++ ...++++++++||+|++|+|++++|+++|
T Consensus 155 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~--~~------------~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 218 (330)
T 4e5n_A 155 AIGLAMADRL-QGWGATLQYHEAKALDTQTE--QR------------LGL-RQVACSELFASSDFILLALPLNADTLHLV 218 (330)
T ss_dssp HHHHHHHHHT-TTSCCEEEEECSSCCCHHHH--HH------------HTE-EECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCCcHhHH--Hh------------cCc-eeCCHHHHHhhCCEEEEcCCCCHHHHHHh
Confidence 9999999996 89999999999987322111 00 011 23589999999999999999999999999
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCC-------C----------CCcccccccccccc
Q 019387 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVT-------E----------LGFSSFKHISTQDR 317 (342)
Q Consensus 255 ~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~E-------P----------~~~~~tPhia~~~~ 317 (342)
+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++| | ||+++|||+|++|.
T Consensus 219 ~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~ 298 (330)
T 4e5n_A 219 NAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVR 298 (330)
T ss_dssp CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCH
T ss_pred CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChH
Confidence 999999999999999999999999999999999999999999999999 7 79999999999998
Q ss_pred ccccccccCchhhcccccccc
Q 019387 318 ATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~ 338 (342)
+.. ..+....++|...+++
T Consensus 299 e~~--~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 299 AVR--LEIERCAAQNILQALA 317 (330)
T ss_dssp HHH--HHHHHHHHHHHHHHHT
T ss_pred HHH--HHHHHHHHHHHHHHHc
Confidence 865 7788888888887764
No 4
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=3e-62 Score=477.06 Aligned_cols=299 Identities=27% Similarity=0.321 Sum_probs=259.9
Q ss_pred EeCCCCceEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCC
Q 019387 9 VWNPNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGG 87 (342)
Q Consensus 9 ~~~~~~~~~vl~~~~~~~~~~~~~l~~~~~-~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~ 87 (342)
++.|+.++|||++.++++.. .+.|++.++ +++... ...+++++.+.+.+ +|+++.+..+++++++++++|+|
T Consensus 9 ~~~~~~~~kIl~~~~i~~~~-~~~l~~~g~~~v~~~~---~~~~~~~l~~~~~~-~d~l~v~~~~~i~~~~l~~~p~L-- 81 (416)
T 3k5p_A 9 LSLSRDRINVLLLEGISQTA-VEYFKSSGYTNVTHLP---KALDKADLIKAISS-AHIIGIRSRTQLTEEIFAAANRL-- 81 (416)
T ss_dssp ---CGGGSCEEECSCCCHHH-HHHHHHTTCCCEEECS---SCCCHHHHHHHHTT-CSEEEECSSCCBCHHHHHHCTTC--
T ss_pred cCCCCCCcEEEEECCCCHHH-HHHHHHCCCcEEEECC---CCCCHHHHHHHccC-CEEEEEcCCCCCCHHHHHhCCCc--
Confidence 45788999999999998754 788888887 777532 34689999999985 99998887779999999999987
Q ss_pred ceEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCe
Q 019387 88 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (342)
Q Consensus 88 k~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gkt 167 (342)
|+|++.|+|+|+||+++|+++||.|+|+|++|+++|||++++++|++.|+++.+++.+++|.|..+ ...+.+|+|||
T Consensus 82 k~I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~---~~~~~el~gkt 158 (416)
T 3k5p_A 82 IAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKT---AIGSREVRGKT 158 (416)
T ss_dssp CEEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CTTCCCSTTCE
T ss_pred EEEEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhccccccc---CCCCccCCCCE
Confidence 999999999999999999999999999999999999999999999999999999999999988653 23468999999
Q ss_pred EEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCC
Q 019387 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD 247 (342)
Q Consensus 168 vgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~ 247 (342)
+||||+|+||+++|+++ ++|||+|++||+++... ........++++++++||+|++|+|++
T Consensus 159 vGIIGlG~IG~~vA~~l-~~~G~~V~~yd~~~~~~------------------~~~~~~~~sl~ell~~aDvV~lhvPlt 219 (416)
T 3k5p_A 159 LGIVGYGNIGSQVGNLA-ESLGMTVRYYDTSDKLQ------------------YGNVKPAASLDELLKTSDVVSLHVPSS 219 (416)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEECTTCCCC------------------BTTBEECSSHHHHHHHCSEEEECCCC-
T ss_pred EEEEeeCHHHHHHHHHH-HHCCCEEEEECCcchhc------------------ccCcEecCCHHHHHhhCCEEEEeCCCC
Confidence 99999999999999996 89999999999875321 001224579999999999999999999
Q ss_pred cccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--------------CCcccccccc
Q 019387 248 KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--------------LGFSSFKHIS 313 (342)
Q Consensus 248 ~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--------------~~~~~tPhia 313 (342)
++|+++|+++.|++||+|++|||+|||++||++||++||++|+++||+||||+.|| ||+++|||++
T Consensus 220 ~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig 299 (416)
T 3k5p_A 220 KSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIG 299 (416)
T ss_dssp ----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCT
T ss_pred HHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999998 5799999999
Q ss_pred ccccccccccccCchhhcccccccc
Q 019387 314 TQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
++|.++. ..+..+.++|...|++
T Consensus 300 ~~T~ea~--~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 300 GSTEEAQ--ERIGTEVTRKLVEYSD 322 (416)
T ss_dssp TCCHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCHHHH--HHHHHHHHHHHHHHHh
Confidence 9999866 7778888888877763
No 5
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-62 Score=470.92 Aligned_cols=305 Identities=26% Similarity=0.340 Sum_probs=230.4
Q ss_pred CCCceeEEEeCCCCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHH
Q 019387 1 MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFA 80 (342)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~ 80 (342)
||+...+. .+|++++||++.+++++ .++.|++ ++++..... ..+++++.+.+. ++|+++++..+++++++++
T Consensus 18 ~~~~~~~~--~~~~~~~vl~~~~~~~~-~~~~L~~-~~~v~~~~~---~~~~~~~~~~~~-~~d~li~~~~~~i~~~~l~ 89 (340)
T 4dgs_A 18 LYFQSMLE--FRNVKPDLLLVEPMMPF-VMDELQR-NYSVHRLYQ---AADRPALEAALP-SIRAVATGGGAGLSNEWME 89 (340)
T ss_dssp -----------------CEECSCCCHH-HHHTHHH-HSCCEETTC---GGGHHHHHHHGG-GCCEEEEETTTCBCHHHHH
T ss_pred hHHHhhhc--cCCCCCEEEEECCCCHH-HHHHHhc-CCcEEEeCC---CCCHHHHHHHhC-CcEEEEEcCCCCCCHHHHh
Confidence 44553333 45788899999999875 4677765 456664321 236788877775 5999999877789999999
Q ss_pred HhhccCCceEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccc
Q 019387 81 ALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG 160 (342)
Q Consensus 81 ~l~~l~~k~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~ 160 (342)
++|+| |+|++.|+|+|+||+++|+++||.|+|+|++++++||||+++++|++.|+++.+++.+++|.|..+.. ...|
T Consensus 90 ~~p~L--k~I~~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~-~~~~ 166 (340)
T 4dgs_A 90 KLPSL--GIIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQ-LPLG 166 (340)
T ss_dssp HCSSC--CEEEEESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC-------CCC
T ss_pred hCCCC--EEEEECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccC-cCcc
Confidence 99987 99999999999999999999999999999999999999999999999999999999999999875411 1246
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+|+||||||||+|+||+++|+++ ++|||+|++||+++... ..+....++++++++||+|
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~-------------------~~~~~~~sl~ell~~aDvV 226 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRA-EAFGMSVRYWNRSTLSG-------------------VDWIAHQSPVDLARDSDVL 226 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEECSSCCTT-------------------SCCEECSSHHHHHHTCSEE
T ss_pred ccccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCcccc-------------------cCceecCCHHHHHhcCCEE
Confidence 899999999999999999999997 79999999999987531 1122347999999999999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCcccccc
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKH 311 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPh 311 (342)
++|+|++++|+++|+++.|+.||+|++|||++||++||++||++||++|+|+||+||||++|| ||+++|||
T Consensus 227 il~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPH 306 (340)
T 4dgs_A 227 AVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPH 306 (340)
T ss_dssp EECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSS
T ss_pred EEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCc
Confidence 999999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred ccccccccccccccCchhhcccccccc
Q 019387 312 ISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 312 ia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
+|++|.+.. ..+....++|...+++
T Consensus 307 ia~~t~e~~--~~~~~~~~~nl~~~~~ 331 (340)
T 4dgs_A 307 QGSATVETR--MAMGKLVLANLAAHFA 331 (340)
T ss_dssp CSSCCHHHH--HHHHHHHHHHHHHHHT
T ss_pred CCcCCHHHH--HHHHHHHHHHHHHHHc
Confidence 999999865 7788888888887764
No 6
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=3.7e-61 Score=470.43 Aligned_cols=296 Identities=23% Similarity=0.272 Sum_probs=255.2
Q ss_pred CCCceEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceE
Q 019387 12 PNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (342)
Q Consensus 12 ~~~~~~vl~~~~~~~~~~~~~l~~~~~-~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i 90 (342)
|+.+||||++.++++. .++.|++.++ ++++.. ...+++++.+.+.+ +|+++++..+++++++++++|+| |+|
T Consensus 1 ~~~~~kil~~~~~~~~-~~~~l~~~~~~~v~~~~---~~~~~~~l~~~~~~-~d~l~~~~~~~~~~~~l~~~~~L--k~I 73 (404)
T 1sc6_A 1 EKDKIKFLLVEGVHQK-ALESLRAAGYTNIEFHK---GALDDEQLKESIRD-AHFIGLRSRTHLTEDVINAAEKL--VAI 73 (404)
T ss_dssp CCSSCCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHTTS-CSEEEECSSCCBCHHHHHHCSSC--CEE
T ss_pred CCCceEEEEeCCCCHH-HHHHHHhCCCcEEEEcC---CCCCHHHHHHHhcC-CeEEEEcCCCCCCHHHHhhCCCC--cEE
Confidence 4677899999888764 4788888777 777532 24688999888875 99998887778999999999987 999
Q ss_pred EEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEE
Q 019387 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 91 ~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgI 170 (342)
++.|+|+|+||+++|+++||.|+|+|++|+++||||+++++|++.|+++.+++.+++|.|..+ .+.+.+|+|||+||
T Consensus 74 ~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~---~~~~~el~gktlGi 150 (404)
T 1sc6_A 74 GAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKL---AAGSFEARGKKLGI 150 (404)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC--------CCCSTTCEEEE
T ss_pred EECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCcccc---CCCccccCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998643 23578999999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019387 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 vG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t 250 (342)
||+|+||+.+|+++ ++|||+|++||+++... .+ ......++++++++||+|++|+|++++|
T Consensus 151 IGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~--------------~~----~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 151 IGYGHIGTQLGILA-ESLGMYVYFYDIENKLP--------------LG----NATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCCC--------------CT----TCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred EeECHHHHHHHHHH-HHCCCEEEEEcCCchhc--------------cC----CceecCCHHHHHhcCCEEEEccCCChHH
Confidence 99999999999996 89999999999976421 00 1223468999999999999999999999
Q ss_pred ccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--------------CCccccccccccc
Q 019387 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--------------LGFSSFKHISTQD 316 (342)
Q Consensus 251 ~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--------------~~~~~tPhia~~~ 316 (342)
+++|+++.|++||+|++|||+|||+++|++||+++|++|+++||+||||+.|| ||+++|||++++|
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T 291 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGST 291 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCS
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999998 4899999999999
Q ss_pred cccccccccCchhhcccccccc
Q 019387 317 RATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
.+.. ..+..+.++|...+++
T Consensus 292 ~ea~--~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 292 QEAQ--ENIGLEVAGKLIKYSD 311 (404)
T ss_dssp HHHH--HHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHHHHHc
Confidence 9865 6677888888877764
No 7
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=8.7e-61 Score=454.78 Aligned_cols=289 Identities=20% Similarity=0.198 Sum_probs=249.7
Q ss_pred CCceEEEEeCCCCchHHHHHH-HhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEE
Q 019387 13 NGKYRVVSTKPMPGTRWINLL-IEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 13 ~~~~~vl~~~~~~~~~~~~~l-~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~ 91 (342)
+++||||++.+.++ .|.+.| ++..+++++... .+.+++.+.+.+ +|+++++. ++++++++++|+| |+|+
T Consensus 3 ~~~mkili~~~~~~-~~~~~L~~~~~p~~~~~~~----~~~~~~~~~~~~-ad~li~~~--~~~~~~l~~~~~L--k~I~ 72 (324)
T 3hg7_A 3 LSQRTLLLLSQDNA-HYERLLKAAHLPHLRILRA----DNQSDAEKLIGE-AHILMAEP--ARAKPLLAKANKL--SWFQ 72 (324)
T ss_dssp -CCEEEEEESTTHH-HHHHHHHHSCCTTEEEEEC----SSHHHHHHHGGG-CSEEEECH--HHHGGGGGGCTTC--CEEE
T ss_pred ccccEEEEecCCCH-HHHHHHhhccCCCeEEEeC----CChhHHHHHhCC-CEEEEECC--CCCHHHHhhCCCc--eEEE
Confidence 35699999988876 578889 777778876543 256788887875 99999863 4567788889987 9999
Q ss_pred EccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEE
Q 019387 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIv 171 (342)
+.|+|+|+||++++++ ||.|+|+||+++.+||||+++++|++.|+++.+++.+++|.|... .+.+|+|+|||||
T Consensus 73 ~~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~tvGII 146 (324)
T 3hg7_A 73 STYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH-----PYQGLKGRTLLIL 146 (324)
T ss_dssp ESSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTCEEEEE
T ss_pred ECCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC-----CCcccccceEEEE
Confidence 9999999999998764 999999999999999999999999999999999999999988642 4579999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019387 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~ 251 (342)
|+|+||+++|+++ ++|||+|++||+++.... . ........++++++++||+|++|+|+|++|+
T Consensus 147 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~-~---------------~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~ 209 (324)
T 3hg7_A 147 GTGSIGQHIAHTG-KHFGMKVLGVSRSGRERA-G---------------FDQVYQLPALNKMLAQADVIVSVLPATRETH 209 (324)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSSCCCCT-T---------------CSEEECGGGHHHHHHTCSEEEECCCCCSSST
T ss_pred EECHHHHHHHHHH-HhCCCEEEEEcCChHHhh-h---------------hhcccccCCHHHHHhhCCEEEEeCCCCHHHH
Confidence 9999999999997 899999999999864210 0 0011234689999999999999999999999
Q ss_pred cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCcccccccccccccccc
Q 019387 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRATSC 321 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~~~~ 321 (342)
++|+++.|+.||+|++|||+|||++||++||++||++|+|+||+||||++|| ||+++|||+|++|.+
T Consensus 210 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--- 286 (324)
T 3hg7_A 210 HLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--- 286 (324)
T ss_dssp TSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH---
T ss_pred HHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH---
Confidence 9999999999999999999999999999999999999999999999999999 799999999999975
Q ss_pred ccccCchhhcccccccc
Q 019387 322 PKLTREWPIYDNSCCIR 338 (342)
Q Consensus 322 ~~~~~~~~~~~~~~~~~ 338 (342)
..+.+..++|...+++
T Consensus 287 -~~~~~~~~~nl~~~~~ 302 (324)
T 3hg7_A 287 -DDVAQIFVRNYIRFID 302 (324)
T ss_dssp -HHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHc
Confidence 2466777788777654
No 8
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=8.6e-61 Score=458.08 Aligned_cols=296 Identities=25% Similarity=0.367 Sum_probs=250.5
Q ss_pred ceEEEEeCCCCc-hHHHHH-HHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHH-HHHHhhccCCceEE
Q 019387 15 KYRVVSTKPMPG-TRWINL-LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGET-LFAALSRAGGKAFS 91 (342)
Q Consensus 15 ~~~vl~~~~~~~-~~~~~~-l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e-~l~~l~~l~~k~i~ 91 (342)
||||++....+. ..+++. +++.++++..... ..+ +++.+.+.+ +|+++++...+++++ +++++|+.++|+|+
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~-~~~~~~~~~-~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~ 75 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQ---ALT-SATVDLAEG-CSSVSLKPLGPVDEEVVYQKLSEYGVKCIG 75 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESS---CCS-TTGGGGGTT-CSEEEECCSSCBCCHHHHHHHHHTTCCEEE
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCC---CCC-HHHHHHhcC-CcEEEEcCCCCcCHHHHHHhccccCceEEE
Confidence 367877653222 223444 3456778876532 223 566666764 999999877799999 99999875669999
Q ss_pred EccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHH-cCCCCCCCCCcccccccCCCeEEE
Q 019387 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMR-AGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~-~g~w~~w~~~~~~~~~L~gktvgI 170 (342)
+.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.++ +|.|. |.. ...+++|+|+||||
T Consensus 76 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~-w~~-~~~~~~l~gktvgI 153 (343)
T 2yq5_A 76 LRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFT-WPS-NLISNEIYNLTVGL 153 (343)
T ss_dssp ESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCC-CCG-GGCBCCGGGSEEEE
T ss_pred ECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcc-ccc-CCCccccCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999 99885 643 24678999999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019387 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 vG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t 250 (342)
||+|+||+++|+++ ++|||+|++||+++....+ . .. ...++++++++||+|++|+|+|++|
T Consensus 154 iGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~-------------~----~~-~~~~l~ell~~aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 154 IGVGHIGSAVAEIF-SAMGAKVIAYDVAYNPEFE-------------P----FL-TYTDFDTVLKEADIVSLHTPLFPST 214 (343)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCGGGT-------------T----TC-EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EecCHHHHHHHHHH-hhCCCEEEEECCChhhhhh-------------c----cc-cccCHHHHHhcCCEEEEcCCCCHHH
Confidence 99999999999997 8999999999998753110 0 01 2359999999999999999999999
Q ss_pred ccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-----------------------CCcc
Q 019387 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-----------------------LGFS 307 (342)
Q Consensus 251 ~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-----------------------~~~~ 307 (342)
+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++|| ||++
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvi 294 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVV 294 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEE
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999998 4789
Q ss_pred ccccccccccccccccccCchhhcccccccc
Q 019387 308 SFKHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 308 ~tPhia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
+|||+|++|.+.. ..+.+..++|...+++
T Consensus 295 lTPHia~~t~ea~--~~~~~~~~~ni~~~l~ 323 (343)
T 2yq5_A 295 ITPHSAFYTETSI--RNMVQICLTDQLTIAK 323 (343)
T ss_dssp ECSSCTTCBHHHH--HHHHHHHHHHHHHHHT
T ss_pred ECCccccchHHHH--HHHHHHHHHHHHHHHc
Confidence 9999999999866 7788888888887764
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=5e-60 Score=454.78 Aligned_cols=297 Identities=25% Similarity=0.352 Sum_probs=255.1
Q ss_pred eEEEEeCCCCchH----HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEe-cCCCCccHHHHHHhhccCCceE
Q 019387 16 YRVVSTKPMPGTR----WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIG-QLTEDWGETLFAALSRAGGKAF 90 (342)
Q Consensus 16 ~~vl~~~~~~~~~----~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~-~~~~~~~~e~l~~l~~l~~k~i 90 (342)
|||++.+.+.... ..+.| .+++++++. +...+++++.+.+.+ +|++++ +...++++++++++|+| |+|
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l--~~~~v~~~~--~~~~~~~~l~~~~~~-ad~li~~~~~~~~~~~~l~~~~~L--k~I 75 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLL--QDHEVKVFN--NTVKGVGQLAARVAD-VEALVLIRERTRVTRQLLDRLPKL--KII 75 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGG--TTSEEEECC--SCCCSHHHHHHHTTT-CSEEEECTTSSCBCHHHHTTCTTC--CEE
T ss_pred eEEEEEcCccccchhhhhhhhh--cCceEEEec--CCCCCHHHHHHHhcC-CeEEEEeCCCCCCCHHHHhhCCCC--eEE
Confidence 7899887776531 12334 347887653 233478899988885 999998 55678999999999987 999
Q ss_pred EEccccC----CccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCC-------CCCCccc
Q 019387 91 SNMAVGY----NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG-------WLPNLFV 159 (342)
Q Consensus 91 ~~~~~G~----d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~-------w~~~~~~ 159 (342)
++.|+|+ |+||+++|+++||.|+|+||+ +.+||||+++++|++.|+++.+++.+++|.|.. |.+....
T Consensus 76 ~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~ 154 (352)
T 3gg9_A 76 SQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGI 154 (352)
T ss_dssp EESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTS
T ss_pred EEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCccccccccccccccc
Confidence 9999999 999999999999999999999 999999999999999999999999999999964 4333345
Q ss_pred ccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
+.+|+|+||||||+|.||+++|+++ ++|||+|++||+++...... . .++....++++++++||+
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~----------~-----~g~~~~~~l~ell~~aDi 218 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYG-RAFGMNVLVWGRENSKERAR----------A-----DGFAVAESKDALFEQSDV 218 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSHHHHHHHH----------H-----TTCEECSSHHHHHHHCSE
T ss_pred CccCCCCEEEEEeECHHHHHHHHHH-HhCCCEEEEECCCCCHHHHH----------h-----cCceEeCCHHHHHhhCCE
Confidence 7899999999999999999999997 89999999999986321110 0 112234699999999999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCcccc
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSF 309 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~t 309 (342)
|++|+|++++|+++|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++|| ||+++|
T Consensus 219 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilT 298 (352)
T 3gg9_A 219 LSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICT 298 (352)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEEC
T ss_pred EEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 799999
Q ss_pred ccccccccccccccccCchhhcccccccc
Q 019387 310 KHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 310 Phia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
||+|+.|.+.. ..+.+..++|...+++
T Consensus 299 PHia~~t~e~~--~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 299 PHIGYVERESY--EMYFGIAFQNILDILQ 325 (352)
T ss_dssp CSCTTCBHHHH--HHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHH--HHHHHHHHHHHHHHHc
Confidence 99999999865 6777888888877654
No 10
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=1.4e-60 Score=453.92 Aligned_cols=289 Identities=19% Similarity=0.189 Sum_probs=248.0
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHH-HHhhccCCceEEEc
Q 019387 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLF-AALSRAGGKAFSNM 93 (342)
Q Consensus 15 ~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l-~~l~~l~~k~i~~~ 93 (342)
|||||++.+++++ +++.|++.++++++....+ .+.++ +. ++|+++++.. ++ ++++ +++|+| |+|++.
T Consensus 1 m~kil~~~~~~~~-~~~~L~~~~~~~~~~~~~~--~~~~~----~~-~ad~l~~~~~-~~-~~~l~~~~~~L--k~I~~~ 68 (324)
T 3evt_A 1 MSLVLMAQATKPE-QLQQLQTTYPDWTFKDAAA--VTAAD----YD-QIEVMYGNHP-LL-KTILARPTNQL--KFVQVI 68 (324)
T ss_dssp -CEEEECSCCCHH-HHHHHHHHCTTCEEEETTS--CCTTT----GG-GEEEEESCCT-HH-HHHHHSTTCCC--CEEECS
T ss_pred CcEEEEecCCCHH-HHHHHHhhCCCeEEecCCc--cChHH----hC-CcEEEEECCc-Ch-HHHHHhhCCCc--eEEEEC
Confidence 4789999999874 6889988877665543222 23333 23 4899988754 46 8888 678887 999999
Q ss_pred cccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHH-HHHHHcCCCCCCCCCcccccccCCCeEEEEe
Q 019387 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA-DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 94 ~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~-~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG 172 (342)
|+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++..+ .+.+++|.|.... .+.+|+||||||||
T Consensus 69 ~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~----~~~~l~gktvGIiG 144 (324)
T 3evt_A 69 SAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM----TTSTLTGQQLLIYG 144 (324)
T ss_dssp SSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS----CCCCSTTCEEEEEC
T ss_pred CccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC----CCccccCCeEEEEC
Confidence 999999999999999999999999999999999999999999999999 9999999876532 47899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019387 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~ 252 (342)
+|+||+++|+++ ++|||+|++||+++... +. .. ......++++++++||+|++|+|+|++|++
T Consensus 145 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~-~~--------------~~-~~~~~~~l~ell~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 145 TGQIGQSLAAKA-SALGMHVIGVNTTGHPA-DH--------------FH-ETVAFTATADALATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEEESSCCCC-TT--------------CS-EEEEGGGCHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HhCCCEEEEECCCcchh-Hh--------------Hh-hccccCCHHHHHhhCCEEEEcCCCchHHHH
Confidence 999999999997 89999999999986431 00 00 111346899999999999999999999999
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCccccccccccccccccc
Q 019387 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRATSCP 322 (342)
Q Consensus 253 li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~~~~~ 322 (342)
+|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++|| ||+++|||+|++|.+..
T Consensus 208 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~-- 285 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFR-- 285 (324)
T ss_dssp CBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHH--
T ss_pred hcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHH--
Confidence 999999999999999999999999999999999999999999999999999 79999999999998855
Q ss_pred cccCchhhcccccccc
Q 019387 323 KLTREWPIYDNSCCIR 338 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (342)
..+.+..++|...+++
T Consensus 286 ~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 286 ATVFPIFAANFAQFVK 301 (324)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7778888888887763
No 11
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=4.2e-60 Score=454.85 Aligned_cols=298 Identities=20% Similarity=0.199 Sum_probs=252.8
Q ss_pred EEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCC--CCccHHHHHHhhccCCceEEEcc
Q 019387 17 RVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLT--EDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 17 ~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~--~~~~~e~l~~l~~l~~k~i~~~~ 94 (342)
++|...+... ...+.|++.++++.+..... .+.+++.+.+.+ +|++++... .++++++++++|+| |+|++.|
T Consensus 21 ~~lg~~~~~l-~~~~~L~~~g~ev~~~~~~~--~~~~~~~~~~~~-ad~li~~~~~~~~~~~~~l~~~p~L--k~i~~~g 94 (351)
T 3jtm_A 21 NFLGCVENAL-GIRDWLESQGHQYIVTDDKE--GPDCELEKHIPD-LHVLISTPFHPAYVTAERIKKAKNL--KLLLTAG 94 (351)
T ss_dssp TCCSSTTTGG-GCHHHHHHTTCEEEEESCCS--STTSHHHHHTTT-CSEEEECTTSCCCBCHHHHHHCSSC--CEEEESS
T ss_pred CEEEeccchH-HHHHHHHHCCCEEEEeCCCC--CCHHHHHHHhCC-CEEEEEccCCCCCCCHHHHhhCCCC--eEEEEeC
Confidence 4444443333 23577888899998764432 356788888875 999998653 46899999999987 9999999
Q ss_pred ccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC
Q 019387 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G 174 (342)
+|+||||+++|+++||.|+|+|++|+.+||||+++++|++.|++..+++.+++|.|... .....+.+|+|+||||||+|
T Consensus 95 ~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~gktvGIIG~G 173 (351)
T 3jtm_A 95 IGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVA-GIAYRAYDLEGKTIGTVGAG 173 (351)
T ss_dssp SCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHH-HHHTTCCCSTTCEEEEECCS
T ss_pred eeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccc-cccCCcccccCCEEeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999988631 11123678999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019387 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li 254 (342)
+||+++|+++ ++|||+|++||+++...... .. .++....++++++++||+|++|+|++++|+++|
T Consensus 174 ~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~--~~------------~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li 238 (351)
T 3jtm_A 174 RIGKLLLQRL-KPFGCNLLYHDRLQMAPELE--KE------------TGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMF 238 (351)
T ss_dssp HHHHHHHHHH-GGGCCEEEEECSSCCCHHHH--HH------------HCCEECSCHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred HHHHHHHHHH-HHCCCEEEEeCCCccCHHHH--Hh------------CCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhh
Confidence 9999999997 89999999999886332111 00 112234689999999999999999999999999
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCccccccccccccccccccc
Q 019387 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRATSCPKL 324 (342)
Q Consensus 255 ~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~~~~~~~ 324 (342)
+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++|| ||+++|||+|++|.+.. ..
T Consensus 239 ~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~--~~ 316 (351)
T 3jtm_A 239 NKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQ--LR 316 (351)
T ss_dssp SHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHH--HH
T ss_pred cHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHH--HH
Confidence 9999999999999999999999999999999999999999999999999 79999999999998865 66
Q ss_pred cCchhhcccccccc
Q 019387 325 TREWPIYDNSCCIR 338 (342)
Q Consensus 325 ~~~~~~~~~~~~~~ 338 (342)
+.+..++|..+|++
T Consensus 317 ~~~~~~~nl~~~~~ 330 (351)
T 3jtm_A 317 YAAGTKDMLERYFK 330 (351)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc
Confidence 77777788777764
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=1.4e-59 Score=449.07 Aligned_cols=293 Identities=27% Similarity=0.364 Sum_probs=249.3
Q ss_pred eEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 019387 16 YRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 16 ~~vl~~~~~~~-~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~ 94 (342)
|||++....+. ..+++.+.+ .+++++.. + . ..+|+.+.+.+ +|+++++...++++++++++|++ |+|++.|
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~-~~~~~~~~--~-~-~~~e~~~~~~~-~d~li~~~~~~i~~~~l~~~~~L--k~I~~~~ 72 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALK-DLSLKIYT--T-D-VSKVPENELKK-AELISVFVYDKLTEELLSKMPRL--KLIHTRS 72 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTT-TSEEEECS--S-C-GGGSCHHHHHH-CSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CEEEEEccChhhHHHHHHHhh-cCCEEEEC--C-C-CcHHHHHHhcC-CeEEEEcCCCCCCHHHHhhCCCC--eEEEECC
Confidence 47777543333 235555543 34776632 1 1 24567777764 99999987778999999999987 9999999
Q ss_pred ccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC
Q 019387 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G 174 (342)
+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|. |.. ...+.+|+|+||||||+|
T Consensus 73 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~tvgIiG~G 150 (334)
T 2pi1_A 73 VGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFS-QDS-EILARELNRLTLGVIGTG 150 (334)
T ss_dssp SCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCG-GGCBCCGGGSEEEEECCS
T ss_pred ccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCc-ccc-CccceeccCceEEEECcC
Confidence 999999999999999999999999999999999999999999999999999999986 321 235789999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019387 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li 254 (342)
+||+++|+++ ++|||+|++||+++....+. .+ . ...++++++++||+|++|+|+|++|+++|
T Consensus 151 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~-----------~g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 212 (334)
T 2pi1_A 151 RIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG-----C-VYTSLDELLKESDVISLHVPYTKETHHMI 212 (334)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT-----C-EECCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred HHHHHHHHHH-HHCcCEEEEECCCcchhhHh-----------cC-----c-eecCHHHHHhhCCEEEEeCCCChHHHHhh
Confidence 9999999997 89999999999987643211 01 1 23469999999999999999999999999
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-------------------------CCcccc
Q 019387 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-------------------------LGFSSF 309 (342)
Q Consensus 255 ~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-------------------------~~~~~t 309 (342)
+++.|++||+|++|||+|||+++|++||++||++|+|.||+||||++|| ||+++|
T Consensus 213 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilT 292 (334)
T 2pi1_A 213 NEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEEC
Confidence 9999999999999999999999999999999999999999999999997 489999
Q ss_pred ccccccccccccccccCchhhcccccccc
Q 019387 310 KHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 310 Phia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
||+|++|.+.. ..+.+..++|...+++
T Consensus 293 PHia~~t~e~~--~~~~~~~~~ni~~~~~ 319 (334)
T 2pi1_A 293 PHIAYYTDKSL--ERIREETVKVVKAFVK 319 (334)
T ss_dssp CSCTTCBHHHH--HHHHHHHHHHHHHHHH
T ss_pred CccccChHHHH--HHHHHHHHHHHHHHHc
Confidence 99999999865 7778888888877654
No 13
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-58 Score=441.25 Aligned_cols=297 Identities=27% Similarity=0.394 Sum_probs=257.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEE
Q 019387 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 12 ~~~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~ 91 (342)
++.+++|+++.++++. ..+.|++.++++.... ..+++++.+.+.+ +|+++++...++++++++++|+| |+|+
T Consensus 23 ~~~~~~vli~~~~~~~-~~~~l~~~~~~v~~~~----~~~~~~~~~~~~~-~d~li~~~~~~~~~~~l~~~~~L--k~I~ 94 (335)
T 2g76_A 23 MANLRKVLISDSLDPC-CRKILQDGGLQVVEKQ----NLSKEELIAELQD-CEGLIVRSATKVTADVINAAEKL--QVVG 94 (335)
T ss_dssp ---CCEEEECSCCCHH-HHHHHHHHTCEEEECC----SCCHHHHHHHGGG-CSEEEECSSSCBCHHHHHHCSSC--CEEE
T ss_pred hccceEEEEcCCCCHH-HHHHHHhCCCEEEECC----CCCHHHHHHHhcC-ceEEEEcCCCCCCHHHHhhCCCC--cEEE
Confidence 3556789999888764 4677777667775432 2478898888875 99999987778999999999987 9999
Q ss_pred EccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEE
Q 019387 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIv 171 (342)
+.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|.. ....+.+++|+|||||
T Consensus 95 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~---~~~~~~~l~g~tvgII 171 (335)
T 2g76_A 95 RAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER---KKFMGTELNGKTLGIL 171 (335)
T ss_dssp ESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCT---GGGCBCCCTTCEEEEE
T ss_pred ECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCc---cCCCCcCCCcCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999998753 2235689999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019387 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~ 251 (342)
|+|+||+.+|+++ ++|||+|++||+++...... . .+ +. ..++++++++||+|++|+|++++|+
T Consensus 172 GlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~-------~g-----~~-~~~l~ell~~aDvV~l~~P~t~~t~ 234 (335)
T 2g76_A 172 GLGRIGREVATRM-QSFGMKTIGYDPIISPEVSA---S-------FG-----VQ-QLPLEEIWPLCDFITVHTPLLPSTT 234 (335)
T ss_dssp CCSHHHHHHHHHH-HTTTCEEEEECSSSCHHHHH---H-------TT-----CE-ECCHHHHGGGCSEEEECCCCCTTTT
T ss_pred eECHHHHHHHHHH-HHCCCEEEEECCCcchhhhh---h-------cC-----ce-eCCHHHHHhcCCEEEEecCCCHHHH
Confidence 9999999999997 79999999999987542110 1 01 11 2589999999999999999999999
Q ss_pred cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCccccccccccccccccc
Q 019387 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHISTQDRATSCP 322 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia~~~~~~~~~ 322 (342)
++|+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||+.|| ||+++|||++++|.+..
T Consensus 235 ~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~-- 312 (335)
T 2g76_A 235 GLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQ-- 312 (335)
T ss_dssp TSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHH--
T ss_pred HhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHH--
Confidence 9999999999999999999999999999999999999999999999999999 79999999999999865
Q ss_pred cccCchhhcccccccc
Q 019387 323 KLTREWPIYDNSCCIR 338 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (342)
..+.+..++|...+++
T Consensus 313 ~~~~~~~~~nl~~~~~ 328 (335)
T 2g76_A 313 SRCGEEIAVQFVDMVK 328 (335)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7778888888877654
No 14
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=4.4e-58 Score=438.80 Aligned_cols=295 Identities=20% Similarity=0.265 Sum_probs=251.3
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEE
Q 019387 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 16 ~~vl~~~--~~~~~~~~~~l~~-~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~ 92 (342)
|||++.. +++ ..+++.+.+ .+.++.... ...+++++.+.+.+ +|+++++...++++++++++|+.++|+|++
T Consensus 1 mki~~~~~~~~~-~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 75 (331)
T 1xdw_A 1 MKVLCYGVRDVE-LPIFEACNKEFGYDIKCVP---DYLNTKETAEMAAG-FDAVILRGNCFANKQNLDIYKKLGVKYILT 75 (331)
T ss_dssp CEEEECSCCTTT-HHHHHHHGGGTCCEEEECS---CCSCSHHHHHTTTT-CSEEEECTTCCBCHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEecCccC-HHHHHHHHHhcCeEEEECC---CCCCHHHHHHHhcC-CeEEEEeCCCCCCHHHHhhCcccCceEEEE
Confidence 4677753 333 345677754 455665432 12355777777764 999999877789999999999844599999
Q ss_pred ccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEe
Q 019387 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG 172 (342)
.|+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|. |.. ...+.++.|++|||||
T Consensus 76 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 153 (331)
T 1xdw_A 76 RTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFK-VDA-FMFSKEVRNCTVGVVG 153 (331)
T ss_dssp SSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCS-TTCCCCGGGSEEEEEC
T ss_pred ccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCc-ccc-CcCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999985 521 2356899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019387 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~ 252 (342)
+|+||+.+|+++ ++|||+|++||+++.... . . .. ...++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~------------~-~----~~-~~~~l~ell~~aDvV~~~~p~t~~t~~ 214 (331)
T 1xdw_A 154 LGRIGRVAAQIF-HGMGATVIGEDVFEIKGI------------E-D----YC-TQVSLDEVLEKSDIITIHAPYIKENGA 214 (331)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCSC------------T-T----TC-EECCHHHHHHHCSEEEECCCCCTTTCC
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCccHHH------------H-h----cc-ccCCHHHHHhhCCEEEEecCCchHHHH
Confidence 999999999997 799999999999875310 0 0 01 235899999999999999999999999
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC------------------------CCccc
Q 019387 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE------------------------LGFSS 308 (342)
Q Consensus 253 li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP------------------------~~~~~ 308 (342)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++|| ||+++
T Consensus 215 li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvil 294 (331)
T 1xdw_A 215 VVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLI 294 (331)
T ss_dssp SBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEE
T ss_pred HhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEE
Confidence 999999999999999999999999999999999999999999999999998 68999
Q ss_pred cccccccccccccccccCchhhcccccccc
Q 019387 309 FKHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 309 tPhia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
|||+|++|.+.. ..+.++.++|...+++
T Consensus 295 TPHia~~t~~~~--~~~~~~~~~nl~~~~~ 322 (331)
T 1xdw_A 295 TPHLGSYTDEAV--KNMVEVSYQNLKDLAE 322 (331)
T ss_dssp CCSCTTCSHHHH--HHHHHHHHHHHHHHHH
T ss_pred cCccccChHHHH--HHHHHHHHHHHHHHHc
Confidence 999999999865 7788888888877654
No 15
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=4.5e-58 Score=439.07 Aligned_cols=295 Identities=27% Similarity=0.393 Sum_probs=249.3
Q ss_pred eEEEEeCCCC-chHHHHHHHhC--CCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEE
Q 019387 16 YRVVSTKPMP-GTRWINLLIEQ--DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 16 ~~vl~~~~~~-~~~~~~~l~~~--~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~ 92 (342)
|||++....+ ...+++.+++. +.++..... . ..+++.+.+. ++|+++++...++++++++++|+.++|+|++
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~---~-~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 76 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDK---L-LTPETVALAK-GADGVVVYQQLDYIAETLQALADNGITKMSL 76 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSS---C-CCTTTGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCC---C-CcHHHHHHhc-CCcEEEEcCCCCCCHHHHHhccccCCeEEEE
Confidence 5777754322 23456777654 446654322 1 2245666666 4999999876789999999999834599999
Q ss_pred ccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEe
Q 019387 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG 172 (342)
.|+|+|+||+++|+++||.|+|+|++++++||||+++++|++.|++..+++.+++|.|. |.. ..+.+++|++|||||
T Consensus 77 ~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~--~~~~~l~g~~vgIiG 153 (333)
T 1j4a_A 77 RNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLR-WAP--TIGREVRDQVVGVVG 153 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCC-CTT--CCBCCGGGSEEEEEC
T ss_pred CCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCc-cCC--cccccCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999985 542 356899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019387 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~ 252 (342)
+|+||+.+|+++ ++|||+|++||+++....+. . .....++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~------------~-----~~~~~~l~ell~~aDvV~l~~p~~~~t~~ 215 (333)
T 1j4a_A 154 TGHIGQVFMQIM-EGFGAKVITYDIFRNPELEK------------K-----GYYVDSLDDLYKQADVISLHVPDVPANVH 215 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH------------T-----TCBCSCHHHHHHHCSEEEECSCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhHHh------------h-----CeecCCHHHHHhhCCEEEEcCCCcHHHHH
Confidence 999999999997 79999999999987643110 0 11224899999999999999999999999
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-----------------------CCcccc
Q 019387 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-----------------------LGFSSF 309 (342)
Q Consensus 253 li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-----------------------~~~~~t 309 (342)
+|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++|| ||+++|
T Consensus 216 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred HHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 999999999999999999999999999999999999999999999999998 589999
Q ss_pred ccccccccccccccccCchhhcccccccc
Q 019387 310 KHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 310 Phia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
||+|++|.+.. ..+.+..++|...+++
T Consensus 296 PHia~~t~~~~--~~~~~~~~~nl~~~~~ 322 (333)
T 1j4a_A 296 PKTAFYTTHAV--RNMVVKAFDNNLELVE 322 (333)
T ss_dssp SSCTTCBHHHH--HHHHHHHHHHHHHHHT
T ss_pred CccccCHHHHH--HHHHHHHHHHHHHHHc
Confidence 99999999865 6777888888777654
No 16
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.4e-58 Score=433.38 Aligned_cols=295 Identities=31% Similarity=0.464 Sum_probs=255.4
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEc
Q 019387 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 14 ~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~ 93 (342)
++|+|+++.+++++ ..+.|++.++++... ...+.+++.+.+.+ +|+++++...++++++++++|+| |+|++.
T Consensus 2 ~~~~il~~~~~~~~-~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 73 (307)
T 1wwk_A 2 KRMKVLVAAPLHEK-AIQVLKDAGLEVIYE----EYPDEDRLVELVKD-VEAIIVRSKPKVTRRVIESAPKL--KVIARA 73 (307)
T ss_dssp --CEEEECSCCCHH-HHHHHHHTTCEEEEC----SSCCHHHHHHHSTT-CSEEEESSCSCBCHHHHTTCTTC--CEEEES
T ss_pred CceEEEEeCCCCHH-HHHHHHhCCeEEEeC----CCCCHHHHHHHhcC-CEEEEEcCCCCCCHHHHhhCCCC--eEEEEC
Confidence 35789998887754 477887777676531 13577888888875 99999887667999999999987 999999
Q ss_pred cccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEec
Q 019387 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 ~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~ 173 (342)
|+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|.. ....+.+|.|++|||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIiG~ 150 (307)
T 1wwk_A 74 GVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAK---KEAMGIELEGKTIGIIGF 150 (307)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCT---TTCCBCCCTTCEEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc---cCcCCcccCCceEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999998753 123468999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019387 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 174 G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~l 253 (342)
|+||+++|+++ ++||++|++||++++.... .. .+ + ...++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~~-------~g-----~-~~~~l~ell~~aDvV~l~~p~~~~t~~l 213 (307)
T 1wwk_A 151 GRIGYQVAKIA-NALGMNILLYDPYPNEERA---KE-------VN-----G-KFVDLETLLKESDVVTIHVPLVESTYHL 213 (307)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HH-------TT-----C-EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCChhhH---hh-------cC-----c-cccCHHHHHhhCCEEEEecCCChHHhhh
Confidence 99999999997 7999999999998764211 11 11 1 1248999999999999999999999999
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCcccccccccccccccccc
Q 019387 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRATSCPK 323 (342)
Q Consensus 254 i~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~~~~~~ 323 (342)
|+++.|+.||+|++|||++||+++|+++|+++|++|+|.||+||||+.|| ||+++|||++++|.+.. .
T Consensus 214 i~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~--~ 291 (307)
T 1wwk_A 214 INEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQ--E 291 (307)
T ss_dssp BCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHH--H
T ss_pred cCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHH--H
Confidence 99999999999999999999999999999999999999999999999999 79999999999999865 7
Q ss_pred ccCchhhcccccccc
Q 019387 324 LTREWPIYDNSCCIR 338 (342)
Q Consensus 324 ~~~~~~~~~~~~~~~ 338 (342)
.+.+..++|...+++
T Consensus 292 ~~~~~~~~nl~~~~~ 306 (307)
T 1wwk_A 292 RAGVEVAEKVVKILK 306 (307)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 778888888777653
No 17
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-57 Score=431.71 Aligned_cols=292 Identities=35% Similarity=0.550 Sum_probs=258.3
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 019387 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~ 95 (342)
++||++.+++++. ++.|++.++++++.... ..+.+++.+.+.+ +|+++++...++++++++++|+| |+|++.|+
T Consensus 1 ~~vl~~~~~~~~~-~~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~L--k~i~~~~~ 74 (311)
T 2cuk_A 1 MRVLVTRTLPGKA-LDRLRERGLEVEVHRGL--FLPKAELLKRVEG-AVGLIPTVEDRIDAEVMDRAKGL--KVIACYSV 74 (311)
T ss_dssp CEEEESSCCSSST-THHHHHTTCEEEECCSS--CCCHHHHHHHHTT-CSEEECCTTSCBCHHHHHHSTTC--CEEECSSS
T ss_pred CEEEEeCCCCHHH-HHHHHhcCCeEEEecCC--CCCHHHHHHHhcC-CeEEEEcCCCCCCHHHHhhCCCC--eEEEECCc
Confidence 4688888877653 67888876788754322 4578899888875 99999887668999999999987 99999999
Q ss_pred cCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH
Q 019387 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (342)
Q Consensus 96 G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~ 175 (342)
|+|+||+++++++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|..|.+....+.++.|++|||||+|+
T Consensus 75 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~ 154 (311)
T 2cuk_A 75 GVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGR 154 (311)
T ss_dssp CCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSH
T ss_pred CccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECH
Confidence 99999999999999999999999999999999999999999999999999999997665433457899999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccC
Q 019387 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (342)
Q Consensus 176 IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~ 255 (342)
||+.+|+++ ++||++|++||++++.. . . ...++++++++||+|++|+|++++|+++|+
T Consensus 155 IG~~~A~~l-~~~G~~V~~~d~~~~~~-----------------~---~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 155 IGQAVAKRA-LAFGMRVVYHARTPKPL-----------------P---Y-PFLSLEELLKEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCSS-----------------S---S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCCccc-----------------c---c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcC
Confidence 999999997 79999999999987531 0 1 246899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCcccccccccccccccccccc
Q 019387 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRATSCPKLT 325 (342)
Q Consensus 256 ~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~~~~~~~~ 325 (342)
++.|+.||+|+++||+|||+++|+++|+++|+ |++.||+||||+.|| ||+++|||++++|.+.. ..+
T Consensus 213 ~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~--~~~ 289 (311)
T 2cuk_A 213 RERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTR--ERM 289 (311)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHH--HHH
T ss_pred HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHH--HHH
Confidence 99999999999999999999999999999999 999999999999999 79999999999998865 777
Q ss_pred Cchhhcccccccc
Q 019387 326 REWPIYDNSCCIR 338 (342)
Q Consensus 326 ~~~~~~~~~~~~~ 338 (342)
.++.++|...+++
T Consensus 290 ~~~~~~nl~~~~~ 302 (311)
T 2cuk_A 290 AEVAVENLLAVLE 302 (311)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8888888877654
No 18
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=1.1e-58 Score=446.49 Aligned_cols=297 Identities=22% Similarity=0.304 Sum_probs=241.5
Q ss_pred CCCceEEEEeCCCCc-------hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhc
Q 019387 12 PNGKYRVVSTKPMPG-------TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSR 84 (342)
Q Consensus 12 ~~~~~~vl~~~~~~~-------~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~ 84 (342)
+|+.+++++..+.+. +...+.|++. +++.... ..+++++.+.+..+++++++. .++++++++++|+
T Consensus 24 ~~~~r~ivll~~~~~~~~~~~~~~~~~~L~~~-~~v~~~~----~~~~~e~~~~~~~~~~~i~~~--~~i~~~~l~~~p~ 96 (365)
T 4hy3_A 24 TNTERPLAISAPEPRSLDLIFSDEARAALHSK-YEIVEAD----PENIAGLGDDILGRARYIIGQ--PPLSAETLARMPA 96 (365)
T ss_dssp ----CCEEEEECTTSCHHHHCCHHHHHHHHHH-SEEEECC----GGGGGGSCTTHHHHEEEEEEC--CCCCHHHHTTCTT
T ss_pred ccCCCCEEEEcCCcccccccCCHHHHHHHhCC-cEEEECC----CCChHHHHHHhhCCeEEEEeC--CCCCHHHHhhCCC
Confidence 344556666554432 2246777765 5775321 224455443332247888754 5899999999998
Q ss_pred cCCceEEEc-cccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCC-cccccc
Q 019387 85 AGGKAFSNM-AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN-LFVGNL 162 (342)
Q Consensus 85 l~~k~i~~~-~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~-~~~~~~ 162 (342)
| |+|++. |+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|. |... ...+.+
T Consensus 97 L--k~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~-w~~~~~~~~~~ 173 (365)
T 4hy3_A 97 L--RSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTEL-WGGEGNASARL 173 (365)
T ss_dssp C--CEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCC-CSSSSTTSCCC
T ss_pred C--eEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcc-ccccccccccc
Confidence 7 999975 8999999999999999999999999999999999999999999999999999999964 5432 245789
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
|+||||||||+|+||+.+|+++ ++|||+|++||++....... ..+ + ...++++++++||+|++
T Consensus 174 l~gktvGIIGlG~IG~~vA~~l-~~fG~~V~~~d~~~~~~~~~----------~~g-----~-~~~~l~ell~~aDvV~l 236 (365)
T 4hy3_A 174 IAGSEIGIVGFGDLGKALRRVL-SGFRARIRVFDPWLPRSMLE----------ENG-----V-EPASLEDVLTKSDFIFV 236 (365)
T ss_dssp SSSSEEEEECCSHHHHHHHHHH-TTSCCEEEEECSSSCHHHHH----------HTT-----C-EECCHHHHHHSCSEEEE
T ss_pred cCCCEEEEecCCcccHHHHHhh-hhCCCEEEEECCCCCHHHHh----------hcC-----e-eeCCHHHHHhcCCEEEE
Confidence 9999999999999999999996 89999999999986432111 011 1 23689999999999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCccccccc
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHI 312 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhi 312 (342)
|+|++++|+++|+++.|++||+|++|||+|||++||++||++||++|+|+ |+||||++|| ||+++|||+
T Consensus 237 ~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHi 315 (365)
T 4hy3_A 237 VAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHR 315 (365)
T ss_dssp CSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSC
T ss_pred cCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCcc
Confidence 99999999999999999999999999999999999999999999999999 9999999999 799999999
Q ss_pred cccccccccccccCchhhcccccccc
Q 019387 313 STQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 313 a~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
|++|.++. ..+..+.++|...+++
T Consensus 316 a~~t~e~~--~~~~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 316 AGALDSAF--KKMGDMVLEDMDLMDR 339 (365)
T ss_dssp SSCCHHHH--HHHHHHHHHHHHHHHT
T ss_pred ccCHHHHH--HHHHHHHHHHHHHHHc
Confidence 99999866 8888899999887764
No 19
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=5.2e-57 Score=429.49 Aligned_cols=298 Identities=26% Similarity=0.417 Sum_probs=256.6
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhc-cCCceEEEcc
Q 019387 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSR-AGGKAFSNMA 94 (342)
Q Consensus 16 ~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~-l~~k~i~~~~ 94 (342)
++|+++.+++++ .++.|++ .+++++... +...+++++.+.+.+ +|+++++..+++++++++++|+ + |+|++.|
T Consensus 2 ~~vl~~~~~~~~-~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~~L--k~I~~~~ 75 (320)
T 1gdh_A 2 KKILITWPLPEA-AMARARE-SYDVIAHGD-DPKITIDEMIETAKS-VDALLITLNEKCRKEVIDRIPENI--KCISTYS 75 (320)
T ss_dssp CEEEESSCCCHH-HHHHHHT-TSEEEECCS-TTCCCHHHHHHHHTT-CSEEEEETTSCBCHHHHHHSCTTC--CEEEEES
T ss_pred cEEEEcCCCCHH-HHHHHHh-cCCEEEecC-CCCCCHHHHHHHhcC-CEEEEECCCCCCCHHHHHhCCccc--eEEEECC
Confidence 578888877664 4677765 457765432 223578899888875 9999988766899999999998 6 9999999
Q ss_pred ccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC
Q 019387 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G 174 (342)
+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|..|.+....+.++.|++|||||+|
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 155 (320)
T 1gdh_A 76 IGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFG 155 (320)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred cccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999766544445789999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC-CchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019387 175 RIGSAYARMMVEGFKMNLIYYDL-YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 175 ~IG~~vA~~l~~afg~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~l 253 (342)
+||+++|+++ ++||++|++||+ +++..... .+ + .....++++++++||+|++|+|++++|+++
T Consensus 156 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~~---~~-------g-----~~~~~~l~ell~~aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 156 SIGQALAKRA-QGFDMDIDYFDTHRASSSDEA---SY-------Q-----ATFHDSLDSLLSVSQFFSLNAPSTPETRYF 219 (320)
T ss_dssp HHHHHHHHHH-HTTTCEEEEECSSCCCHHHHH---HH-------T-----CEECSSHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCcChhhhh---hc-------C-----cEEcCCHHHHHhhCCEEEEeccCchHHHhh
Confidence 9999999997 799999999999 77542111 01 1 112348999999999999999999999999
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCccccccccccccccccccc
Q 019387 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHISTQDRATSCPKL 324 (342)
Q Consensus 254 i~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia~~~~~~~~~~~ 324 (342)
|+++.|+.||+|++|||++||+++|+++|.++|++|++.||+||||+.|| ||+++|||++++|.+.. ..
T Consensus 220 i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~--~~ 297 (320)
T 1gdh_A 220 FNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAR--ED 297 (320)
T ss_dssp BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHH--HH
T ss_pred cCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHH--HH
Confidence 99999999999999999999999999999999999999999999999998 79999999999998864 66
Q ss_pred cCchhhcccccccc
Q 019387 325 TREWPIYDNSCCIR 338 (342)
Q Consensus 325 ~~~~~~~~~~~~~~ 338 (342)
+.+.. +|...+++
T Consensus 298 ~~~~~-~nl~~~~~ 310 (320)
T 1gdh_A 298 MAHQA-NDLIDALF 310 (320)
T ss_dssp HHHHH-HHHHHHHH
T ss_pred HHHHH-HHHHHHHc
Confidence 66677 77776653
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=5e-58 Score=438.64 Aligned_cols=294 Identities=24% Similarity=0.363 Sum_probs=248.1
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEE
Q 019387 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 16 ~~vl~~~--~~~~~~~~~~l~~-~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~ 92 (342)
|||++.. +++ ..+++.+.+ .+.++.+.... ..+++.+.+. ++|+++++...++++++++++|+.++|+|++
T Consensus 1 Mkil~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 74 (333)
T 1dxy_A 1 MKIIAYGARVDE-IQYFKQWAKDTGNTLEYHTEF----LDENTVEWAK-GFDGINSLQTTPYAAGVFEKMHAYGIKFLTI 74 (333)
T ss_dssp CEEEECSCCTTT-HHHHHHHHHHHCCEEEECSSC----CCTTGGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEeccccC-HHHHHHHHHhCCeEEEEcCCC----ChHHHHHHhc-CCeEEEEcCCCCCCHHHHHhCcccCceEEEE
Confidence 4677743 333 345666643 45666543221 2245666666 4999999876789999999999834599999
Q ss_pred ccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEe
Q 019387 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG 172 (342)
.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|. |.. ...+.+|.|+||||||
T Consensus 75 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 152 (333)
T 1dxy_A 75 RNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYE-KAG-TFIGKELGQQTVGVMG 152 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHH-HHT-CCCCCCGGGSEEEEEC
T ss_pred cCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcc-ccc-CCCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999984 411 1356899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019387 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~ 252 (342)
+|+||+.+|+++ ++|||+|++||+++.... . . .. ...++++++++||+|++|+|++++|++
T Consensus 153 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~------------~-~----~~-~~~~l~ell~~aDvV~~~~P~~~~t~~ 213 (333)
T 1dxy_A 153 TGHIGQVAIKLF-KGFGAKVIAYDPYPMKGD------------H-P----DF-DYVSLEDLFKQSDVIDLHVPGIEQNTH 213 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCSSC------------C-T----TC-EECCHHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhh------------H-h----cc-ccCCHHHHHhcCCEEEEcCCCchhHHH
Confidence 999999999997 799999999999875310 0 0 01 235899999999999999999999999
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-----------------------CCcccc
Q 019387 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-----------------------LGFSSF 309 (342)
Q Consensus 253 li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-----------------------~~~~~t 309 (342)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++|| ||+++|
T Consensus 214 li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~T 293 (333)
T 1dxy_A 214 IINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLS 293 (333)
T ss_dssp SBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEEC
T ss_pred HhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEEC
Confidence 999999999999999999999999999999999999999999999999997 589999
Q ss_pred ccccccccccccccccCchhhcccccccc
Q 019387 310 KHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 310 Phia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
||+|++|.+.. ..+.+..++|...+++
T Consensus 294 PHia~~t~e~~--~~~~~~~~~nl~~~~~ 320 (333)
T 1dxy_A 294 PHIAYYTETAV--HNMVYFSLQHLVDFLT 320 (333)
T ss_dssp SSCTTCSHHHH--HHHHHHHHHHHHHHHH
T ss_pred CccccChHHHH--HHHHHHHHHHHHHHHc
Confidence 99999999865 6777888888877654
No 21
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.9e-57 Score=426.64 Aligned_cols=292 Identities=25% Similarity=0.409 Sum_probs=255.6
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 019387 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~ 94 (342)
+|||+++.++++ ...+.|++.++++.. ....+++++.+.+.+ +|+++++...++++++++++|+| |+|++.|
T Consensus 5 ~mkil~~~~~~~-~~~~~l~~~~~~v~~----~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 76 (313)
T 2ekl_A 5 TVKALITDPIDE-ILIKTLREKGIQVDY----MPEISKEELLNIIGN-YDIIVVRSRTKVTKDVIEKGKKL--KIIARAG 76 (313)
T ss_dssp CCEEEECSCCCH-HHHHHHHHTTCEEEE----CTTCCHHHHHHHGGG-CSEEEECSSSCBCHHHHHHCTTC--CEEEECS
T ss_pred ceEEEEECCCCH-HHHHHHHhCCcEEEe----CCCCCHHHHHHHhcC-CeEEEEcCCCCCCHHHHhhCCCC--eEEEEcC
Confidence 468999888776 457888887777742 123578888888875 99999876667999999999987 9999999
Q ss_pred ccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC
Q 019387 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G 174 (342)
+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|.. ..+.++.|++|||||+|
T Consensus 77 ~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-----~~~~~l~g~~vgIIG~G 151 (313)
T 2ekl_A 77 IGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK-----IEGLELAGKTIGIVGFG 151 (313)
T ss_dssp SCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC-----CCCCCCTTCEEEEESCS
T ss_pred CCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC-----CCCCCCCCCEEEEEeeC
Confidence 9999999999999999999999999999999999999999999999999999998752 34679999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019387 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li 254 (342)
+||+++|+++ ++||++|++||++++.... .. .+ .. ..++++++++||+|++|+|++++|+++|
T Consensus 152 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~~-------~g-----~~-~~~l~ell~~aDvVvl~~P~~~~t~~li 214 (313)
T 2ekl_A 152 RIGTKVGIIA-NAMGMKVLAYDILDIREKA---EK-------IN-----AK-AVSLEELLKNSDVISLHVTVSKDAKPII 214 (313)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HH-------TT-----CE-ECCHHHHHHHCSEEEECCCCCTTSCCSB
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCcchhHH---Hh-------cC-----ce-ecCHHHHHhhCCEEEEeccCChHHHHhh
Confidence 9999999997 7999999999998764311 11 11 11 2489999999999999999999999999
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC------------CCccccccccccccccccc
Q 019387 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE------------LGFSSFKHISTQDRATSCP 322 (342)
Q Consensus 255 ~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP------------~~~~~tPhia~~~~~~~~~ 322 (342)
+++.|+.||+|++|||++||+++|+++|.++|++|+++||+||||+.|| ||+++|||++++|.+..
T Consensus 215 ~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~-- 292 (313)
T 2ekl_A 215 DYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQ-- 292 (313)
T ss_dssp CHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHH--
T ss_pred CHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHH--
Confidence 9999999999999999999999999999999999999999999999999 78999999999998865
Q ss_pred cccCchhhcccccccc
Q 019387 323 KLTREWPIYDNSCCIR 338 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (342)
..+.+..++|...+++
T Consensus 293 ~~~~~~~~~n~~~~~~ 308 (313)
T 2ekl_A 293 KRVAEMTTQNLLNAMK 308 (313)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7778888888777653
No 22
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=4.3e-57 Score=439.14 Aligned_cols=286 Identities=21% Similarity=0.199 Sum_probs=242.7
Q ss_pred HHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecC--CCCccHHHHHHhhccCCceEEEccccCCccChhHHHh
Q 019387 30 INLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANK 107 (342)
Q Consensus 30 ~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~--~~~~~~e~l~~l~~l~~k~i~~~~~G~d~id~~~~~~ 107 (342)
.+.|++.++++.+.... ..+.+++.+.+.+ +|++++.. ..++++++++++|+| |+|++.|+|+|+||+++|++
T Consensus 60 ~~~l~~~g~~v~~~~~~--~~~~~~l~~~l~~-ad~li~~~~~~~~i~~~~l~~~p~L--k~I~~~g~G~d~iD~~aa~~ 134 (393)
T 2nac_A 60 RKYLESNGHTLVVTSDK--DGPDSVFERELVD-ADVVISQPFWPAYLTPERIAKAKNL--KLALTAGIGSDHVDLQSAID 134 (393)
T ss_dssp HHHHHHTTCEEEEESCC--SSTTSHHHHHHTT-CSEEEEBTTBCCCBCHHHHHHCTTC--CEEEESSSCCTTBCHHHHHH
T ss_pred HHHHHhCCCEEEEecCC--CCCHHHHHHhccC-CCEEEEcCccCCCCCHHHHhhCCCC--cEEEEcCccccccCHHHHhc
Confidence 35777888888754322 2345678888875 99999863 347899999999987 99999999999999999999
Q ss_pred CCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhc
Q 019387 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (342)
Q Consensus 108 ~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~a 187 (342)
+||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|... .....+.+|+|+||||||+|+||+.+|+++ ++
T Consensus 135 ~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~gktvGIIGlG~IG~~vA~~l-~a 212 (393)
T 2nac_A 135 RNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIA-DCVSHAYDLEAMHVGTVAAGRIGLAVLRRL-AP 212 (393)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHH-HHHTTCCCCTTCEEEEECCSHHHHHHHHHH-GG
T ss_pred CCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCcc-ccccCCccCCCCEEEEEeECHHHHHHHHHH-Hh
Confidence 9999999999999999999999999999999999999999988531 111235789999999999999999999997 89
Q ss_pred CCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcE
Q 019387 188 FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAI 267 (342)
Q Consensus 188 fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~ 267 (342)
|||+|++||+++...... .. .+.....++++++++||+|++|+|++++|+++|+++.|++||+|++
T Consensus 213 ~G~~V~~~d~~~~~~~~~--~~------------~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gai 278 (393)
T 2nac_A 213 FDVHLHYTDRHRLPESVE--KE------------LNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAY 278 (393)
T ss_dssp GTCEEEEECSSCCCHHHH--HH------------HTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEE
T ss_pred CCCEEEEEcCCccchhhH--hh------------cCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCE
Confidence 999999999986432111 00 0112235899999999999999999999999999999999999999
Q ss_pred EEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCccccccccccccccccccccCchhhccccccc
Q 019387 268 LVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRATSCPKLTREWPIYDNSCCI 337 (342)
Q Consensus 268 lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~~~~~~~~~~~~~~~~~~~~ 337 (342)
|||++||+++|+++|+++|++|+|.||+||||++|| ||+++|||++++|.+.. ..+....++|..+++
T Consensus 279 lIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~--~~~~~~~~~nl~~~~ 356 (393)
T 2nac_A 279 IVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQ--ARYAAGTREILECFF 356 (393)
T ss_dssp EEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHH--HHHHHHHHHHHHHHH
T ss_pred EEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHH--HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 69999999999998855 566677777777665
Q ss_pred c
Q 019387 338 R 338 (342)
Q Consensus 338 ~ 338 (342)
+
T Consensus 357 ~ 357 (393)
T 2nac_A 357 E 357 (393)
T ss_dssp H
T ss_pred c
Confidence 3
No 23
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.1e-57 Score=440.88 Aligned_cols=301 Identities=22% Similarity=0.209 Sum_probs=251.0
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecC--CCCccHHHHHHhhccCCceEE
Q 019387 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 14 ~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~--~~~~~~e~l~~l~~l~~k~i~ 91 (342)
.+++||..+...+. +.+.|++.++++.+.... ..+.+++.+.+.+ +|++++.. ..++++++++++|++ |+|+
T Consensus 16 ~~~~vl~~d~~~~~-~~~~l~~~~~~v~~~~~~--~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~l~~~~~L--k~I~ 89 (364)
T 2j6i_A 16 DEEKLYGCTENKLG-IANWLKDQGHELITTSDK--EGGNSVLDQHIPD-ADIIITTPFHPAYITKERIDKAKKL--KLVV 89 (364)
T ss_dssp HCTTCTTBTTTGGG-CHHHHHHTTCEEEEESCC--SSTTSHHHHHGGG-CSEEEECTTSCCCBCHHHHHHCTTC--CEEE
T ss_pred cCceEEEecCccHH-HHHHHHhCCCEEEEcCCC--CCCHHHHHHHhhC-CeEEEecCcCCCCCCHHHHhhCCCC--eEEE
Confidence 45567766665543 456778888888765322 2346788888875 99999754 236899999999987 9999
Q ss_pred EccccCCccChhHHHhC--CeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEE
Q 019387 92 NMAVGYNNVDVNAANKY--GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (342)
Q Consensus 92 ~~~~G~d~id~~~~~~~--gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvg 169 (342)
+.|+|+|+||+++|+++ ||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|... .....+.+|+|+|||
T Consensus 90 ~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~g~tvg 168 (364)
T 2j6i_A 90 VAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVA-AIAKDAYDIEGKTIA 168 (364)
T ss_dssp ESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHH-HHHTTCCCSTTCEEE
T ss_pred ECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcC-cccCCcccCCCCEEE
Confidence 99999999999999999 999999999999999999999999999999999999999988521 111246799999999
Q ss_pred EEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCc
Q 019387 170 VIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (342)
Q Consensus 170 IvG~G~IG~~vA~~l~~afg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~ 248 (342)
|||+|+||+.+|+++ ++|||+ |++||+++...... .. .+.....++++++++||+|++|+|+++
T Consensus 169 IIG~G~IG~~vA~~l-~~~G~~~V~~~d~~~~~~~~~--~~------------~g~~~~~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 169 TIGAGRIGYRVLERL-VPFNPKELLYYDYQALPKDAE--EK------------VGARRVENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp EECCSHHHHHHHHHH-GGGCCSEEEEECSSCCCHHHH--HH------------TTEEECSSHHHHHHTCSEEEECCCCST
T ss_pred EECcCHHHHHHHHHH-HhCCCcEEEEECCCccchhHH--Hh------------cCcEecCCHHHHHhcCCEEEECCCCCh
Confidence 999999999999997 899997 99999876432111 00 012233589999999999999999999
Q ss_pred ccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC------------C---Ccccccccc
Q 019387 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE------------L---GFSSFKHIS 313 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP------------~---~~~~tPhia 313 (342)
+|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++|| | |+++|||+|
T Consensus 234 ~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia 313 (364)
T 2j6i_A 234 GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYS 313 (364)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCG
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccC
Confidence 9999999999999999999999999999999999999999999999999999999 5 899999999
Q ss_pred ccccccccccccCchhhcccccccc
Q 019387 314 TQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
++|.+.. ..+....++|...+++
T Consensus 314 ~~t~e~~--~~~~~~~~~nl~~~~~ 336 (364)
T 2j6i_A 314 GTTLDAQ--TRYAQGTVNILESFFT 336 (364)
T ss_dssp GGSHHHH--HHHHHHHHHHHHHHHT
T ss_pred cCCHHHH--HHHHHHHHHHHHHHHc
Confidence 9998864 5566667777766653
No 24
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=7.4e-57 Score=426.88 Aligned_cols=283 Identities=18% Similarity=0.189 Sum_probs=237.2
Q ss_pred CceEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEE
Q 019387 14 GKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 14 ~~~~vl~~~~~~-~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~ 92 (342)
+.|||++..+.+ .+.|.+.+++..+++++....+ ++ .. ++|+++++. .+++++++ |++ |+|++
T Consensus 2 ~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~-----~~----~~-~ad~~i~~~---~~~~~l~~-~~L--k~I~~ 65 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNALEKALPHARVREWKV-----GD----NN-PADYALVWQ---PPVEMLAG-RRL--KAVFV 65 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT-----TC----CS-CCSEEEESS---CCHHHHTT-CCC--SEEEE
T ss_pred CceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC-----CC----cc-CcEEEEECC---CCHHHhCC-CCc--eEEEE
Confidence 348898877654 3568888988877777644322 11 22 599999884 46899988 877 99999
Q ss_pred ccccCCcc-C-hhH---HHhCCeeEecCCCCC-chhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCC
Q 019387 93 MAVGYNNV-D-VNA---ANKYGIAVGNTPGVL-TETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (342)
Q Consensus 93 ~~~G~d~i-d-~~~---~~~~gI~V~n~~~~~-~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gk 166 (342)
.|+|+|+| | +++ +.++||+|+|+++.+ +.+||||+++++|++.|++..+++.+++|.|..+ .+++++|+
T Consensus 66 ~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~ 140 (315)
T 3pp8_A 66 LGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL-----PEYTREEF 140 (315)
T ss_dssp SSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTC
T ss_pred CCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC-----CCCCcCCC
Confidence 99999999 7 886 678999999999874 8999999999999999999999999999998653 35789999
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl 246 (342)
||||||+|+||+++|+++ ++|||+|++||+++... + +. .......++++++++||+|++|+|+
T Consensus 141 tvGIiG~G~IG~~vA~~l-~~~G~~V~~~dr~~~~~-~-------------~~--~~~~~~~~l~ell~~aDiV~l~~Pl 203 (315)
T 3pp8_A 141 SVGIMGAGVLGAKVAESL-QAWGFPLRCWSRSRKSW-P-------------GV--ESYVGREELRAFLNQTRVLINLLPN 203 (315)
T ss_dssp CEEEECCSHHHHHHHHHH-HTTTCCEEEEESSCCCC-T-------------TC--EEEESHHHHHHHHHTCSEEEECCCC
T ss_pred EEEEEeeCHHHHHHHHHH-HHCCCEEEEEcCCchhh-h-------------hh--hhhcccCCHHHHHhhCCEEEEecCC
Confidence 999999999999999997 89999999999886531 0 00 0011125899999999999999999
Q ss_pred CcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCccccccccccc
Q 019387 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQD 316 (342)
Q Consensus 247 ~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~ 316 (342)
|++|+++|+++.|+.||+|++|||+|||++||++||++||++|+|+||+||||++|| ||+++|||+|++|
T Consensus 204 t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t 283 (315)
T 3pp8_A 204 TAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVT 283 (315)
T ss_dssp CGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCC
T ss_pred chhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999 7999999999999
Q ss_pred cccccccccCchhhcccccccc
Q 019387 317 RATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
.+ ..+.+..++|...+++
T Consensus 284 ~~----~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 284 RP----AEAIDYISRTITQLEK 301 (315)
T ss_dssp CH----HHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHHc
Confidence 75 2456667777766653
No 25
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=2.6e-55 Score=419.37 Aligned_cols=294 Identities=27% Similarity=0.380 Sum_probs=252.9
Q ss_pred CCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHH-HHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEE
Q 019387 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVED-IIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 13 ~~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e-~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~ 91 (342)
|++++|+++.++++. +++.|++. +++..... ..+.++ +.+.+. ++|+++++...++++++++++|+| |+|+
T Consensus 21 m~~~~vl~~~~~~~~-~~~~l~~~-~~~~~~~~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~p~L--k~I~ 92 (333)
T 3ba1_A 21 MEAIGVLMMCPMSTY-LEQELDKR-FKLFRYWT---QPAQRDFLALQAE-SIRAVVGNSNAGADAELIDALPKL--EIVS 92 (333)
T ss_dssp -CCCEEEECSCCCHH-HHHHHHHH-SEEEEGGG---CSSHHHHHHHHTT-TEEEEEECSSSCBCHHHHHHCTTC--CEEE
T ss_pred CCCCEEEEeCCCCHH-HHHHHHhc-CCEEEecC---CCChHHHHHHHhC-CCEEEEEcCCCCCCHHHHhhCCCC--cEEE
Confidence 445789999887764 56777654 56654321 124455 455555 599999877678999999999987 9999
Q ss_pred EccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEE
Q 019387 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIv 171 (342)
+.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|.. . ....+.+++|++||||
T Consensus 93 ~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~-~-~~~~~~~l~g~~vgII 170 (333)
T 3ba1_A 93 SFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKF-G-DFKLTTKFSGKRVGII 170 (333)
T ss_dssp ESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGG-C-CCCCCCCCTTCCEEEE
T ss_pred EcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc-c-ccccccccCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999852 1 1234689999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019387 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~ 251 (342)
|+|+||+.+|+++ ++||++|++||+++... .++....++++++++||+|++|+|.+++|+
T Consensus 171 G~G~iG~~vA~~l-~~~G~~V~~~dr~~~~~-------------------~g~~~~~~l~ell~~aDvVil~vP~~~~t~ 230 (333)
T 3ba1_A 171 GLGRIGLAVAERA-EAFDCPISYFSRSKKPN-------------------TNYTYYGSVVELASNSDILVVACPLTPETT 230 (333)
T ss_dssp CCSHHHHHHHHHH-HTTTCCEEEECSSCCTT-------------------CCSEEESCHHHHHHTCSEEEECSCCCGGGT
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEECCCchhc-------------------cCceecCCHHHHHhcCCEEEEecCCChHHH
Confidence 9999999999997 79999999999987531 012234689999999999999999999999
Q ss_pred cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCccccccccccccccccc
Q 019387 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHISTQDRATSCP 322 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia~~~~~~~~~ 322 (342)
++++++.|+.||+|++|||++||.++|+++|+++|++|++++|+||||+.|| ||+++|||+++.|.+..
T Consensus 231 ~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~-- 308 (333)
T 3ba1_A 231 HIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETR-- 308 (333)
T ss_dssp TCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHH--
T ss_pred HHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHH--
Confidence 9999999999999999999999999999999999999999999999999999 79999999999998865
Q ss_pred cccCchhhcccccccc
Q 019387 323 KLTREWPIYDNSCCIR 338 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (342)
..+.++.++|...+++
T Consensus 309 ~~~~~~~~~nl~~~~~ 324 (333)
T 3ba1_A 309 KVMADLVVGNLEAHFS 324 (333)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7778888888877764
No 26
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=1.7e-54 Score=414.03 Aligned_cols=305 Identities=29% Similarity=0.401 Sum_probs=259.3
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHh-hccCCc
Q 019387 11 NPNGKYRVVSTKPMPGTRWINLLIEQ-DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGK 88 (342)
Q Consensus 11 ~~~~~~~vl~~~~~~~~~~~~~l~~~-~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l-~~l~~k 88 (342)
.|+++|+|+++.++++ .+++.|++. ++++.... .+...+++++.+.+.+ +|+++++...++++++++++ |++ |
T Consensus 4 ~~~~~~~il~~~~~~~-~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~l~~~~~~L--k 78 (330)
T 2gcg_A 4 RPVRLMKVFVTRRIPA-EGRVALARAADCEVEQWD-SDEPIPAKELERGVAG-AHGLLCLLSDHVDKRILDAAGANL--K 78 (330)
T ss_dssp ---CCEEEEESSCCCH-HHHHHHHHCTTEEEEECC-SSSCCCHHHHHHHHTT-CSEEEECTTSCBCHHHHHHHCTTC--C
T ss_pred CCCCCCEEEEECCCCH-HHHHHHHhcCCceEEEec-CCCCCCHHHHHHHhcC-CeEEEECCCCCCCHHHHHhcCCCc--e
Confidence 4667889999987765 457788765 35665432 2234578899888875 99999876668999999999 877 9
Q ss_pred eEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeE
Q 019387 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (342)
Q Consensus 89 ~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktv 168 (342)
+|++.|+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|..|.+....|.++.|++|
T Consensus 79 ~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 79 VISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999877544445789999999
Q ss_pred EEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCc
Q 019387 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (342)
Q Consensus 169 gIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~ 248 (342)
||||+|.||+.+|+++ ++||++|++||+++...... .. .+... .++++++++||+|++|+|.++
T Consensus 159 gIIG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~~--~~------------~g~~~-~~l~e~l~~aDvVi~~vp~~~ 222 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRL-KPFGVQRFLYTGRQPRPEEA--AE------------FQAEF-VSTPELAAQSDFIVVACSLTP 222 (330)
T ss_dssp EEECCSHHHHHHHHHH-GGGTCCEEEEESSSCCHHHH--HT------------TTCEE-CCHHHHHHHCSEEEECCCCCT
T ss_pred EEECcCHHHHHHHHHH-HHCCCEEEEECCCCcchhHH--Hh------------cCcee-CCHHHHHhhCCEEEEeCCCCh
Confidence 9999999999999997 79999999999876432111 00 01122 389999999999999999999
Q ss_pred ccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC----------CCccccccccccccc
Q 019387 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE----------LGFSSFKHISTQDRA 318 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP----------~~~~~tPhia~~~~~ 318 (342)
+|+++++++.++.||+|++|||++||.++|+++|.++|++|++.||++|||+.|| +|+++|||+++.|.+
T Consensus 223 ~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~ 302 (330)
T 2gcg_A 223 ATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHR 302 (330)
T ss_dssp TTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHH
T ss_pred HHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHH
Confidence 9999999999999999999999999999999999999999999999999999998 699999999999987
Q ss_pred cccccccCchhhcccccccc
Q 019387 319 TSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~ 338 (342)
.. ..+....++|...+++
T Consensus 303 ~~--~~~~~~~~~n~~~~~~ 320 (330)
T 2gcg_A 303 TR--NTMSLLAANNLLAGLR 320 (330)
T ss_dssp HH--HHHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHHHHc
Confidence 54 6677777777776653
No 27
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=2.7e-55 Score=421.25 Aligned_cols=304 Identities=25% Similarity=0.332 Sum_probs=248.2
Q ss_pred eCCCCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCce
Q 019387 10 WNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKA 89 (342)
Q Consensus 10 ~~~~~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~ 89 (342)
..++++++|++..........+.++. ..++..+. ..+.+|+.+.+.+++|+++++...++++++++++|+| |+
T Consensus 16 ~~~~~kp~i~~l~~~~~~~~~~~l~~-~~~~~~~~----~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L--k~ 88 (347)
T 1mx3_A 16 PRGSHMPLVALLDGRDCTVEMPILKD-VATVAFCD----AQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKAL--RI 88 (347)
T ss_dssp -----CCEEEESSCSCCTTTHHHHTT-TCEEEECC----CSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSC--CE
T ss_pred CCCCCCCEEEEEcCCcchhhHHHhhc-cceEEecC----CCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCC--CE
Confidence 34567888888754322112456654 45666442 2355666655422478888776678999999999987 99
Q ss_pred EEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCC----cccccccCC
Q 019387 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN----LFVGNLLKG 165 (342)
Q Consensus 90 i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~----~~~~~~L~g 165 (342)
|++.|+|+|+||+++|+++||.|+|+|++++++||||+++++|++.|++..+++.+++|.|...... ...+.+++|
T Consensus 89 I~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g 168 (347)
T 1mx3_A 89 IVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRG 168 (347)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTT
T ss_pred EEEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999988421100 011268999
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+||||||+|+||+.+|+++ ++|||+|++||+++....+. . .+.....++++++++||+|++|+|
T Consensus 169 ~tvGIIG~G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~------------~g~~~~~~l~ell~~aDvV~l~~P 232 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRA-KAFGFNVLFYDPYLSDGVER---A------------LGLQRVSTLQDLLFHSDCVTLHCG 232 (347)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECTTSCTTHHH---H------------HTCEECSSHHHHHHHCSEEEECCC
T ss_pred CEEEEEeECHHHHHHHHHH-HHCCCEEEEECCCcchhhHh---h------------cCCeecCCHHHHHhcCCEEEEcCC
Confidence 9999999999999999997 79999999999986532111 0 011233589999999999999999
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-----------CCccccccccc
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-----------LGFSSFKHIST 314 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-----------~~~~~tPhia~ 314 (342)
++++|+++|+++.|+.||+|++|||++||+++|+++|+++|++|+|.||+||||+.|| ||+++|||+++
T Consensus 233 ~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~ 312 (347)
T 1mx3_A 233 LNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAW 312 (347)
T ss_dssp CCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTT
T ss_pred CCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 68999999999
Q ss_pred cccccccccccCchhhcccccccc
Q 019387 315 QDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
+|.+.. ..+.++.++|...+++
T Consensus 313 ~t~~~~--~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 313 YSEQAS--IEMREEAAREIRRAIT 334 (347)
T ss_dssp CCHHHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHHHHHHHHHHHc
Confidence 998866 7788888888877764
No 28
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=5.3e-55 Score=421.60 Aligned_cols=270 Identities=25% Similarity=0.341 Sum_probs=229.6
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEc
Q 019387 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 14 ~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~ 93 (342)
+|||||++..++. ..+.+++.+ +++... +...+.++ +. ++|+++++..+++++++++ .+++ |+|++.
T Consensus 2 ~mmkIl~~~~~p~--~~~~~~~~~-~v~~~~--~~~~~~~~----l~-~ad~li~~~~~~v~~~ll~-~~~L--k~I~~~ 68 (381)
T 3oet_A 2 NAMKILVDENMPY--ARELFSRLG-EVKAVP--GRPIPVEE----LN-HADALMVRSVTKVNESLLS-GTPI--NFVGTA 68 (381)
T ss_dssp CCCEEEEETTSTT--HHHHHTTSS-EEEEEC--C---CHHH----HT-TCSEEEECTTSCBSHHHHT-TSCC--CEEEES
T ss_pred CceEEEECCCCcH--HHHHHhhCC-cEEEeC--CCCCCHHH----HC-CCEEEEECCCCCCCHHHHc-CCCC--EEEEEc
Confidence 4689999987764 245665554 776543 23345554 34 4999999877789999998 4545 999999
Q ss_pred cccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEec
Q 019387 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 ~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~ 173 (342)
|+|+||||+++++++||.|+|+||+|+.+||||+++++|++.|+. |.+|+||||||||+
T Consensus 69 ~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~---------------------g~~l~gktvGIIGl 127 (381)
T 3oet_A 69 TAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD---------------------GFSLRDRTIGIVGV 127 (381)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT---------------------TCCGGGCEEEEECC
T ss_pred cccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc---------------------CCccCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999852 35799999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcc----
Q 019387 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT---- 249 (342)
Q Consensus 174 G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~---- 249 (342)
|+||+++|+++ ++|||+|++||++.... . ......++++++++||+|++|+|++++
T Consensus 128 G~IG~~vA~~l-~a~G~~V~~~d~~~~~~---------------~----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~ 187 (381)
T 3oet_A 128 GNVGSRLQTRL-EALGIRTLLCDPPRAAR---------------G----DEGDFRTLDELVQEADVLTFHTPLYKDGPYK 187 (381)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECHHHHHT---------------T----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCChHHh---------------c----cCcccCCHHHHHhhCCEEEEcCcCCcccccc
Confidence 99999999997 89999999999854321 0 011347999999999999999999999
Q ss_pred cccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--------CCcccccccccccccccc
Q 019387 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--------LGFSSFKHISTQDRATSC 321 (342)
Q Consensus 250 t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--------~~~~~tPhia~~~~~~~~ 321 (342)
|+++|+++.|++||+|++|||+|||++||++||++||++|++.||+||||++|| .++++|||+|++|.+..
T Consensus 188 T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~- 266 (381)
T 3oet_A 188 TLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGK- 266 (381)
T ss_dssp CTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHH-
T ss_pred chhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHH-
Confidence 999999999999999999999999999999999999999999999999999999 24789999999998876
Q ss_pred ccccCchhhccccccccc
Q 019387 322 PKLTREWPIYDNSCCIRM 339 (342)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~ 339 (342)
..+..+.++|...++.-
T Consensus 267 -~~~~~~~~~~l~~~l~~ 283 (381)
T 3oet_A 267 -ARGTTQVFEAYSAFIGR 283 (381)
T ss_dssp -HHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHHcC
Confidence 77778888888777653
No 29
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.4e-53 Score=408.14 Aligned_cols=298 Identities=35% Similarity=0.552 Sum_probs=256.6
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 019387 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~ 95 (342)
++|+++.++++ .+++.|++. +++++.. .....+.+++.+.+.+ +|+++++...++++++++++|+| |+|++.|+
T Consensus 3 ~~il~~~~~~~-~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~l~~~~~L--k~I~~~~~ 76 (334)
T 2dbq_A 3 PKVFITREIPE-VGIKMLEDE-FEVEVWG-DEKEIPREILLKKVKE-VDALVTMLSERIDKEVFENAPKL--RIVANYAV 76 (334)
T ss_dssp CEEEESSCCCH-HHHHHHHTT-SEEEECC-CSSCCCHHHHHHHTTS-CSEEEECTTSCBCHHHHHTCTTC--CEEEESSS
T ss_pred cEEEEecCCCH-HHHHHHHhc-CCEEEec-CCCCCCHHHHHHHhcC-cEEEEEcCCCCCCHHHHhhCCCc--eEEEECCc
Confidence 57888877765 457777654 5776533 2223578888888875 99999887678999999999987 99999999
Q ss_pred cCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCC----CCCCCcccccccCCCeEEEE
Q 019387 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 96 G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~----~w~~~~~~~~~L~gktvgIv 171 (342)
|+|+||+++++++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|. .|.+....+.++.|++||||
T Consensus 77 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgII 156 (334)
T 2dbq_A 77 GYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGII 156 (334)
T ss_dssp CCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEE
T ss_pred ccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999996 56543345789999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019387 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~ 251 (342)
|+|.||+.+|+++ ++||++|++||++++.. .. ..+ + . ...++++++++||+|++|+|.+++|+
T Consensus 157 G~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~--~~-~~~-------g-----~-~~~~l~~~l~~aDvVil~vp~~~~t~ 219 (334)
T 2dbq_A 157 GLGRIGQAIAKRA-KGFNMRILYYSRTRKEE--VE-REL-------N-----A-EFKPLEDLLRESDFVVLAVPLTRETY 219 (334)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSSCCHH--HH-HHH-------C-----C-EECCHHHHHHHCSEEEECCCCCTTTT
T ss_pred ccCHHHHHHHHHH-HhCCCEEEEECCCcchh--hH-hhc-------C-----c-ccCCHHHHHhhCCEEEECCCCChHHH
Confidence 9999999999997 79999999999987541 11 111 1 1 12589999999999999999999999
Q ss_pred cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCccccccccccccccccc
Q 019387 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHISTQDRATSCP 322 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia~~~~~~~~~ 322 (342)
++++++.++.||+|++|||++||.++|+++|.++|++|++.||++|||+.|| ||+++|||+++.|.+..
T Consensus 220 ~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~-- 297 (334)
T 2dbq_A 220 HLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAR-- 297 (334)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHH--
T ss_pred HhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHH--
Confidence 9999999999999999999999999999999999999999999999999997 79999999999998865
Q ss_pred cccCchhhcccccccc
Q 019387 323 KLTREWPIYDNSCCIR 338 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (342)
..+.+..++|...+++
T Consensus 298 ~~~~~~~~~n~~~~~~ 313 (334)
T 2dbq_A 298 EGMAELVAKNLIAFKR 313 (334)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 6777788888777654
No 30
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=3.6e-54 Score=414.34 Aligned_cols=302 Identities=24% Similarity=0.318 Sum_probs=251.1
Q ss_pred CCceEEEEeCC-CC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhC----CCceEEEec------CCCCccHHHHH
Q 019387 13 NGKYRVVSTKP-MP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIG----DKCDGVIGQ------LTEDWGETLFA 80 (342)
Q Consensus 13 ~~~~~vl~~~~-~~-~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~----~~~d~vi~~------~~~~~~~e~l~ 80 (342)
|++++||++.+ ++ ....++.|++. +++.... ..+++++.+.+. +++|+++.. ...++++++++
T Consensus 1 m~~~~vl~~~~~~~~~~~~~~~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 75 (348)
T 2w2k_A 1 MPRPRVLLLGDPARHLDDLWSDFQQK-FEVIPAN----LTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLIS 75 (348)
T ss_dssp -CCCEEEECSSCCSSCHHHHHHHHHH-SEEEECC----CCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHT
T ss_pred CCCcEEEEECCccccChHHHHHHHhc-ceEEecC----CCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHH
Confidence 34578998877 53 23345667553 5775432 247899988886 148988864 23589999999
Q ss_pred Hhh-ccCCceEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCC---CCCCC-C
Q 019387 81 ALS-RAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL---YDGWL-P 155 (342)
Q Consensus 81 ~l~-~l~~k~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~---w~~w~-~ 155 (342)
++| +| |+|++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|. |..+. .
T Consensus 76 ~~~~~L--k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~ 153 (348)
T 2w2k_A 76 HLPSSL--KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLE 153 (348)
T ss_dssp TSCTTC--CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hcccCc--eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccccc
Confidence 998 46 99999999999999999999999999999999999999999999999999999999999998 73210 0
Q ss_pred CcccccccCCCeEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh
Q 019387 156 NLFVGNLLKGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 156 ~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~-afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll 234 (342)
....+.+|+|++|||||+|+||+.+|+++ + +||++|++||+++...... ..+ +.....++++++
T Consensus 154 ~~~~~~~l~g~~vgIIG~G~IG~~vA~~l-~~~~G~~V~~~d~~~~~~~~~--~~~------------g~~~~~~l~ell 218 (348)
T 2w2k_A 154 IGKSAHNPRGHVLGAVGLGAIQKEIARKA-VHGLGMKLVYYDVAPADAETE--KAL------------GAERVDSLEELA 218 (348)
T ss_dssp HHTTCCCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEECSSCCCHHHH--HHH------------TCEECSSHHHHH
T ss_pred ccccCcCCCCCEEEEEEECHHHHHHHHHH-HHhcCCEEEEECCCCcchhhH--hhc------------CcEEeCCHHHHh
Confidence 11246799999999999999999999996 8 9999999999987532111 000 111234899999
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CC
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LG 305 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~ 305 (342)
++||+|++|+|.+++|+++|+++.++.||+|++|||++||+++|+++|.++|++|++.||++|||+.|| ||
T Consensus 219 ~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~n 298 (348)
T 2w2k_A 219 RRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKH 298 (348)
T ss_dssp HHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSS
T ss_pred ccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 79
Q ss_pred ccccccccccccccccccccCchhhcccccccc
Q 019387 306 FSSFKHISTQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 306 ~~~tPhia~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
+++|||+++.|.+.. ..+.+..++|...+++
T Consensus 299 viltPH~~~~t~e~~--~~~~~~~~~ni~~~~~ 329 (348)
T 2w2k_A 299 VTLTTHIGGVAIETF--HEFERLTMTNIDRFLL 329 (348)
T ss_dssp EEECCSCTTCSHHHH--HHHHHHHHHHHHHHHH
T ss_pred EEEcCcCCCCCHHHH--HHHHHHHHHHHHHHHc
Confidence 999999999999865 6778888888877764
No 31
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.1e-53 Score=406.65 Aligned_cols=294 Identities=29% Similarity=0.424 Sum_probs=253.3
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 019387 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~ 94 (342)
+++||++.+++++ .++.|++. +++++.. ..+.+++.+.+.+ +|++++....++++++++++|++ |+|++.|
T Consensus 2 ~~~il~~~~~~~~-~~~~l~~~-~~~~~~~----~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 72 (333)
T 2d0i_A 2 RPKVGVLLKMKRE-ALEELKKY-ADVEIIL----YPSGEELKGVIGR-FDGIIVSPTTKITREVLENAERL--KVISCHS 72 (333)
T ss_dssp CSEEEECSCCCHH-HHHHHHTT-SEEEECC----SCCHHHHHHHGGG-CSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CcEEEEECCCCHH-HHHHHHhc-CCEEEeC----CCCHHHHHHHhcC-CEEEEECCCCCCCHHHHhhCCCc--eEEEECC
Confidence 3578888887764 57778664 5776532 2578888888875 99999776678999999999987 9999999
Q ss_pred ccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccc----cccCCCeEEE
Q 019387 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG----NLLKGQTVGV 170 (342)
Q Consensus 95 ~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~----~~L~gktvgI 170 (342)
+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|..|. ....| .+|.|++|||
T Consensus 73 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~~~~~l~g~~vgI 151 (333)
T 2d0i_A 73 AGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHA-KIWTGFKRIESLYGKKVGI 151 (333)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHH-HHHTTSCCCCCSTTCEEEE
T ss_pred cccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCc-ccccCCcccCCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999999999986542 11235 7899999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019387 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 vG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t 250 (342)
||+|+||+.+|+++ ++||++|++||++++..... .+ + .. ..++++++++||+|++|+|.+++|
T Consensus 152 IG~G~iG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~~-------g-----~~-~~~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 152 LGMGAIGKAIARRL-IPFGVKLYYWSRHRKVNVEK---EL-------K-----AR-YMDIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp ECCSHHHHHHHHHH-GGGTCEEEEECSSCCHHHHH---HH-------T-----EE-ECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HHCCCEEEEECCCcchhhhh---hc-------C-----ce-ecCHHHHHhhCCEEEEcCCCChHH
Confidence 99999999999997 79999999999987642110 10 1 11 248999999999999999999999
Q ss_pred ccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------C-Cccccccccccccccc
Q 019387 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------L-GFSSFKHISTQDRATS 320 (342)
Q Consensus 251 ~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~-~~~~tPhia~~~~~~~ 320 (342)
+++++++.++.||+| +|||++||.++|+++|.++|++|+++||++|||++|| | |+++|||+++.|.+..
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~ 293 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQ 293 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHH
Confidence 999999999999999 9999999999999999999999999999999999998 6 9999999999998865
Q ss_pred cccccCchhhcccccccc
Q 019387 321 CPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~ 338 (342)
..+.++.++|...+++
T Consensus 294 --~~~~~~~~~n~~~~~~ 309 (333)
T 2d0i_A 294 --EDVGFRAVENLLKVLR 309 (333)
T ss_dssp --HHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHc
Confidence 6777788888777654
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.7e-53 Score=402.21 Aligned_cols=274 Identities=20% Similarity=0.277 Sum_probs=234.1
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 019387 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~ 95 (342)
|+||++.++++ .+++.|++.++++. . +.+. ++|+++++. .+.++++++|+| |+|++.|+
T Consensus 1 m~il~~~~~~~-~~~~~l~~~~~~v~----~----------~~~~-~~d~~i~~~---~~~~~l~~~~~L--k~I~~~~~ 59 (303)
T 1qp8_A 1 MELYVNFELPP-EAEEELRKYFKIVR----G----------GDLG-NVEAALVSR---ITAEELAKMPRL--KFIQVVTA 59 (303)
T ss_dssp CEEECCSCCCH-HHHHHHHTTCEEEC----S----------SCCT-TBCCCCBSC---CCHHHHHHCTTC--CCEEBSSS
T ss_pred CEEEEccCCCH-HHHHHHHhcCCccc----h----------hhhC-CCEEEEECC---CCHHHHhhCCCC--cEEEECCc
Confidence 47888877765 45788877654442 1 1233 489888764 346899999987 99999999
Q ss_pred cCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH
Q 019387 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (342)
Q Consensus 96 G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~ 175 (342)
|+|+||++++ ++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|..+. .+.++.|+||||||+|+
T Consensus 60 G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~----~~~~l~g~~vgIIG~G~ 134 (303)
T 1qp8_A 60 GLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV----EIPLIQGEKVAVLGLGE 134 (303)
T ss_dssp CCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS----CCCCCTTCEEEEESCST
T ss_pred CcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC----CCCCCCCCEEEEEccCH
Confidence 9999999985 799999999999999999999999999999999999999999986431 23589999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccC
Q 019387 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (342)
Q Consensus 176 IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~ 255 (342)
||+++|+++ ++|||+|++||+++. . . +.....++++++++||+|++|+|++++|+++|+
T Consensus 135 IG~~~A~~l-~~~G~~V~~~dr~~~-~--~-----------------~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~ 193 (303)
T 1qp8_A 135 IGTRVGKIL-AALGAQVRGFSRTPK-E--G-----------------PWRFTNSLEEALREARAAVCALPLNKHTRGLVK 193 (303)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCC-C--S-----------------SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCcc-c--c-----------------CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC
Confidence 999999997 799999999998764 1 0 111346899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecC-CCCC----------CCcccccccccc--ccccccc
Q 019387 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF-EVTE----------LGFSSFKHISTQ--DRATSCP 322 (342)
Q Consensus 256 ~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~-~~EP----------~~~~~tPhia~~--~~~~~~~ 322 (342)
++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+|||| ++|| ||+++|||++++ |.+..
T Consensus 194 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~-- 271 (303)
T 1qp8_A 194 YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVW-- 271 (303)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHH--
T ss_pred HHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHH--
Confidence 99999999999999999999999999999999999999999999 8788 799999999998 66644
Q ss_pred cccCchhhcccccccc
Q 019387 323 KLTREWPIYDNSCCIR 338 (342)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (342)
..+.+..++|...+++
T Consensus 272 ~~~~~~~~~nl~~~~~ 287 (303)
T 1qp8_A 272 RQMVMEAVRNLITYAT 287 (303)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 6667777888776654
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=4.7e-52 Score=419.86 Aligned_cols=294 Identities=28% Similarity=0.363 Sum_probs=249.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEE
Q 019387 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 13 ~~~~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~ 92 (342)
|++|+||++.++.+. .++.|++. +++++.. ..+++++.+.+.+ +|+++++..+++++++++++|+| |+|++
T Consensus 2 m~~~~vl~~~~~~~~-~~~~l~~~-~~v~~~~----~~~~~~~~~~~~~-~d~li~~~~~~~~~~~l~~~~~L--k~i~~ 72 (529)
T 1ygy_A 2 VSLPVVLIADKLAPS-TVAALGDQ-VEVRWVD----GPDRDKLLAAVPE-ADALLVRSATTVDAEVLAAAPKL--KIVAR 72 (529)
T ss_dssp -CCCEEEECSSCCGG-GGTTSCSS-SEEEECC----TTSHHHHHHHGGG-CSEEEECSSSCBCHHHHHTCTTC--CEEEE
T ss_pred CCCcEEEEeCCCCHH-HHHHHhcC-ceEEEcC----CCCHHHHHHHhcC-CEEEEEcCCCCCCHHHHhhCCCC--cEEEE
Confidence 346789998888764 35666554 6776532 2578899888875 99999987778999999999987 99999
Q ss_pred ccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEe
Q 019387 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG 172 (342)
.|+|+|+||+++|+++||.|+|+|++|+.+||||+++++|++.|+++++++.+++|.|.+ ..+.|.+|+|++|||||
T Consensus 73 ~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIIG 149 (529)
T 1ygy_A 73 AGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKR---SSFSGTEIFGKTVGVVG 149 (529)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCG---GGCCBCCCTTCEEEEEC
T ss_pred CCcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcc---cCcCccccCCCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998753 23457899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019387 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~ 252 (342)
+|+||+++|++| ++||++|++||++..... . .. .+ +.. .++++++++||+|++|+|.+++|++
T Consensus 150 ~G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~-a--~~-------~g-----~~~-~~l~e~~~~aDvV~l~~P~~~~t~~ 212 (529)
T 1ygy_A 150 LGRIGQLVAQRI-AAFGAYVVAYDPYVSPAR-A--AQ-------LG-----IEL-LSLDDLLARADFISVHLPKTPETAG 212 (529)
T ss_dssp CSHHHHHHHHHH-HTTTCEEEEECTTSCHHH-H--HH-------HT-----CEE-CCHHHHHHHCSEEEECCCCSTTTTT
T ss_pred eCHHHHHHHHHH-HhCCCEEEEECCCCChhH-H--Hh-------cC-----cEE-cCHHHHHhcCCEEEECCCCchHHHH
Confidence 999999999997 799999999999874211 1 00 01 112 3899999999999999999999999
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC---------CCcccccccccccccccccc
Q 019387 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHISTQDRATSCPK 323 (342)
Q Consensus 253 li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia~~~~~~~~~~ 323 (342)
+++++.+..||+|+++||++||+++|+++|+++|++|+++||++|||+.|| +++++|||+++.|.+.. .
T Consensus 213 ~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~--~ 290 (529)
T 1ygy_A 213 LIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQ--D 290 (529)
T ss_dssp CBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHH--H
T ss_pred HhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHH--H
Confidence 999999999999999999999999999999999999999999999999999 79999999998887653 3
Q ss_pred ccCchhhccccccc
Q 019387 324 LTREWPIYDNSCCI 337 (342)
Q Consensus 324 ~~~~~~~~~~~~~~ 337 (342)
.+....++|...++
T Consensus 291 ~~~~~~~~~l~~~l 304 (529)
T 1ygy_A 291 RAGTDVAESVRLAL 304 (529)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444433
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.2e-53 Score=394.84 Aligned_cols=240 Identities=22% Similarity=0.294 Sum_probs=212.8
Q ss_pred CceEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHH
Q 019387 62 KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA 141 (342)
Q Consensus 62 ~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~ 141 (342)
++|++++... ++ ++|+| |+|++.|+|+|+||+++++++||.++| ++.++.+||||+++++|++.|++..+
T Consensus 34 ~ad~li~~~~-~~------~~~~L--k~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~ 103 (290)
T 3gvx_A 34 DAEAQVIKDR-YV------LGKRT--KMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILEN 103 (290)
T ss_dssp CCSEEEESSC-CC------CCSSC--CEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hhhhhhhhhh-hh------hhhhh--HHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhh
Confidence 4899998432 32 67776 999999999999999999987776665 57899999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC
Q 019387 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 142 ~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (342)
++.+++|.|... ...+|+|+||||||+|+||+++|+++ ++|||+|++||+++....
T Consensus 104 ~~~~~~g~w~~~-----~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~------------------ 159 (290)
T 3gvx_A 104 NELMKAGIFRQS-----PTTLLYGKALGILGYGGIGRRVAHLA-KAFGMRVIAYTRSSVDQN------------------ 159 (290)
T ss_dssp HHHHHTTCCCCC-----CCCCCTTCEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSCCCTT------------------
T ss_pred hhHhhhcccccC-----CceeeecchheeeccCchhHHHHHHH-HhhCcEEEEEeccccccc------------------
Confidence 999999998642 13689999999999999999999997 799999999999875310
Q ss_pred ccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCC
Q 019387 222 VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEV 301 (342)
Q Consensus 222 ~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~ 301 (342)
......++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.+|+||||++
T Consensus 160 -~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~ 238 (290)
T 3gvx_A 160 -VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWN 238 (290)
T ss_dssp -CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred -cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence 0123469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-------CCcccccccc-ccccccccccccCchhhcccccccc
Q 019387 302 TE-------LGFSSFKHIS-TQDRATSCPKLTREWPIYDNSCCIR 338 (342)
Q Consensus 302 EP-------~~~~~tPhia-~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (342)
|| ||+++|||+| ++|.+.. ..+.++.++|...+++
T Consensus 239 EP~~pL~~~~nvilTPHiag~~t~e~~--~~~~~~~~~ni~~~~~ 281 (290)
T 3gvx_A 239 EPEITETNLRNAILSPHVAGGMSGEIM--DIAIQLAFENVRNFFE 281 (290)
T ss_dssp TTSCCSCCCSSEEECCSCSSCBTTBCC--HHHHHHHHHHHHHHTC
T ss_pred CcccchhhhhhhhcCccccCCccchHH--HHHHHHHHHHHHhhhc
Confidence 99 7999999999 8888855 7888889999887764
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-51 Score=398.62 Aligned_cols=267 Identities=24% Similarity=0.323 Sum_probs=225.8
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 019387 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~~vl~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~ 95 (342)
|||+++..++. ..+.+++.+ ++..... ...+.+++ . ++|+++++..+++++++++ +|++ |+|++.|+
T Consensus 1 mkil~~~~~~~--~~~~~~~~~-~v~~~~~--~~~~~~~l----~-~ad~li~~~~~~~~~~~l~-~~~L--k~I~~~~~ 67 (380)
T 2o4c_A 1 MRILADENIPV--VDAFFADQG-SIRRLPG--RAIDRAAL----A-EVDVLLVRSVTEVSRAALA-GSPV--RFVGTCTI 67 (380)
T ss_dssp CEEEEETTCTT--HHHHHGGGS-EEEEECG--GGCSTTTT----T-TCSEEEECTTSCBCHHHHT-TSCC--CEEEECSS
T ss_pred CEEEEecCchH--HHHHHHhCC-cEEEecC--CcCChHHH----C-CcEEEEEcCCCCCCHHHhc-CCCc--eEEEEcCc
Confidence 47888877654 245665544 6665432 12233332 3 5999999877789999998 8876 99999999
Q ss_pred cCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH
Q 019387 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (342)
Q Consensus 96 G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~ 175 (342)
|+||||+++++++||.|+|+||+|+.+||||+++++|++.|++ +.+|+|+||||||+|+
T Consensus 68 G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~---------------------~~~l~g~tvGIIGlG~ 126 (380)
T 2o4c_A 68 GTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR---------------------GADLAERTYGVVGAGQ 126 (380)
T ss_dssp CSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH---------------------TCCGGGCEEEEECCSH
T ss_pred ccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh---------------------hcccCCCEEEEEeCCH
Confidence 9999999999999999999999999999999999999999863 2579999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcc----cc
Q 019387 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT----TY 251 (342)
Q Consensus 176 IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~----t~ 251 (342)
||+++|++| ++|||+|++||+++... . .+ . ...++++++++||+|++|+|++++ |+
T Consensus 127 IG~~vA~~l-~~~G~~V~~~d~~~~~~--~-----------~g-----~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 127 VGGRLVEVL-RGLGWKVLVCDPPRQAR--E-----------PD-----G-EFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp HHHHHHHHH-HHTTCEEEEECHHHHHH--S-----------TT-----S-CCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred HHHHHHHHH-HHCCCEEEEEcCChhhh--c-----------cC-----c-ccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 999999997 79999999999765321 0 01 1 236899999999999999999999 99
Q ss_pred cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--------CCcccccccccccccccccc
Q 019387 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--------LGFSSFKHISTQDRATSCPK 323 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--------~~~~~tPhia~~~~~~~~~~ 323 (342)
++|+++.|++||+|++|||+|||+++|+++|+++|++|+|.+|+||||++|| +|+++|||+|++|.+.. .
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TPHiag~t~e~~--~ 264 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLEGK--L 264 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECSSCTTCCHHHH--H
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEccccCcCCHHHH--H
Confidence 9999999999999999999999999999999999999999999999999999 57899999999998854 5
Q ss_pred ccCchhhcccccccc
Q 019387 324 LTREWPIYDNSCCIR 338 (342)
Q Consensus 324 ~~~~~~~~~~~~~~~ 338 (342)
.+.++.++|...+++
T Consensus 265 ~~~~~~~~nl~~~l~ 279 (380)
T 2o4c_A 265 RGTAQIYQAYCAWRG 279 (380)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 666777777766654
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.97 E-value=1.7e-32 Score=271.56 Aligned_cols=194 Identities=14% Similarity=0.164 Sum_probs=165.6
Q ss_pred CceEE-EccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCC
Q 019387 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (342)
Q Consensus 87 ~k~i~-~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~g 165 (342)
++.|+ ..++|+|++ +++.++||.++|++++|+ +|+| ++.|++....+.+++| |.+ ..+.++.|
T Consensus 194 l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r-----~~~~~l~G 257 (479)
T 1v8b_A 194 IIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR-----ATDFLISG 257 (479)
T ss_dssp CCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH-----HHCCCCTT
T ss_pred eEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh-----ccccccCC
Confidence 48888 789999998 789999999999999999 9999 4468888888888887 642 34578999
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
|+|||||+|.||+.+|+++ ++|||+|++||+++....+... . ++ ...++++++++||+|++|+
T Consensus 258 ktVgIIG~G~IG~~vA~~l-~~~G~~Viv~d~~~~~~~~a~~---------~-----g~-~~~~l~ell~~aDiVi~~~- 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSM-KGLGARVYITEIDPICAIQAVM---------E-----GF-NVVTLDEIVDKGDFFITCT- 320 (479)
T ss_dssp SEEEEECCSHHHHHHHHHH-HHHTCEEEEECSCHHHHHHHHT---------T-----TC-EECCHHHHTTTCSEEEECC-
T ss_pred CEEEEEeeCHHHHHHHHHH-HhCcCEEEEEeCChhhHHHHHH---------c-----CC-EecCHHHHHhcCCEEEECC-
Confidence 9999999999999999996 8999999999998764322211 0 11 2358999999999999994
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHcCCceEEEEecCCCCC---------CCcccccccc
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE--HLKQNPMFRVGLDVFEVTE---------LGFSSFKHIS 313 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~--aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia 313 (342)
+|+++|+++.|+.||+|++|||+|||++ ||+++|.+ ||++|+|+ +++|||+.++ ||+++| |+|
T Consensus 321 ---~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~~~~l~~l~~~nvv~t-H~a 395 (479)
T 1v8b_A 321 ---GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPNGNKIIVLARGRLLNL-GCA 395 (479)
T ss_dssp ---SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTTSCEEEEEGGGSBHHH-HSS
T ss_pred ---ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCCCCeeeEecCCCEEEE-ecc
Confidence 7899999999999999999999999999 99999999 99999998 9999997665 789999 998
Q ss_pred -ccccc
Q 019387 314 -TQDRA 318 (342)
Q Consensus 314 -~~~~~ 318 (342)
+++.+
T Consensus 396 tghp~e 401 (479)
T 1v8b_A 396 TGHPAF 401 (479)
T ss_dssp CCSCHH
T ss_pred CCCCch
Confidence 55533
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.97 E-value=3.5e-32 Score=270.13 Aligned_cols=192 Identities=16% Similarity=0.214 Sum_probs=159.2
Q ss_pred CceEE-EccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCC
Q 019387 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (342)
Q Consensus 87 ~k~i~-~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~g 165 (342)
++.|+ ..++|+|++ +++.++||.|+|++++|+ +|||+. .|++....+.+++| |.+ ..+.++.|
T Consensus 214 l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~-----~~g~~L~G 277 (494)
T 3d64_A 214 IKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR-----ATDVMIAG 277 (494)
T ss_dssp CCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH-----HHCCCCTT
T ss_pred cEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh-----ccccccCC
Confidence 47887 789999998 789999999999999999 999943 47766665555555 432 34678999
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
|+|||+|+|.||+.+|+++ ++|||+|++||+++....+... . ++ ...++++++++||+|++|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l-~~~G~~V~v~d~~~~~~~~a~~---------~-----G~-~~~~l~ell~~aDiVi~~~- 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSL-RGLGATVWVTEIDPICALQAAM---------E-----GY-RVVTMEYAADKADIFVTAT- 340 (494)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECSCHHHHHHHHT---------T-----TC-EECCHHHHTTTCSEEEECS-
T ss_pred CEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCChHhHHHHHH---------c-----CC-EeCCHHHHHhcCCEEEECC-
Confidence 9999999999999999996 8999999999998864322211 0 11 2358999999999999997
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCceEEEEecCCCCC---------CCcccccccc-c
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMFRVGLDVFEVTE---------LGFSSFKHIS-T 314 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~aL~~g~i~~aaLDV~~~EP---------~~~~~tPhia-~ 314 (342)
+|+++|+++.|++||+|++|||+|||++ ||+++| +||++|+|+ +++|||+.++ ||+++| |+| +
T Consensus 341 ---~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~plp~~~pL~~l~~~nvv~t-H~atg 414 (494)
T 3d64_A 341 ---GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHIIFPDGKRVILLAEGRLVNL-GCATG 414 (494)
T ss_dssp ---SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEEECTTSCEEEEEGGGSBHHH-HTSCC
T ss_pred ---CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEEECCCCCchhhcCCCCEEEE-eCcCC
Confidence 6899999999999999999999999999 699999 999999998 8888886543 789999 999 5
Q ss_pred ccc
Q 019387 315 QDR 317 (342)
Q Consensus 315 ~~~ 317 (342)
++.
T Consensus 415 ~~~ 417 (494)
T 3d64_A 415 HPS 417 (494)
T ss_dssp SCH
T ss_pred CCH
Confidence 553
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=5.4e-29 Score=233.64 Aligned_cols=216 Identities=15% Similarity=0.075 Sum_probs=166.1
Q ss_pred CCceEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCC------CCHHHHHHHhCCCceEEEec----------------
Q 019387 13 NGKYRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTI------LSVEDIIALIGDKCDGVIGQ---------------- 69 (342)
Q Consensus 13 ~~~~~vl~~~~~~~-~~~~~~l~~~~~~v~~~~~~~~~------~~~~e~~~~~~~~~d~vi~~---------------- 69 (342)
|..|+|++...... ..+.+.|.+.++++.+...++.. ...+++.+.+. ++|+++.+
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~~~~~~ 81 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWN-TVDAILLPISGTNEAGKVDTIFSN 81 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGG-GCSEEECCTTCCCTTCBCCBSSCS
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHh-cCCEEEeccccccCCceeeccccc
Confidence 34567777643222 34567888889999875432211 12245555555 48999985
Q ss_pred CCCCccHHHHHHhhccCCceEEEccccCCccCh-hHHHhCCeeEecCC------CCCchhHHHHHHHHHHHHHhchHHHH
Q 019387 70 LTEDWGETLFAALSRAGGKAFSNMAVGYNNVDV-NAANKYGIAVGNTP------GVLTETTAELAASLSLAAARRIVEAD 142 (342)
Q Consensus 70 ~~~~~~~e~l~~l~~l~~k~i~~~~~G~d~id~-~~~~~~gI~V~n~~------~~~~~~vAE~~l~~~L~~~R~~~~~~ 142 (342)
...++++++++++|++ |+|+ +|+|++|+ ++++++||.|+|++ ++++.+|||++++++|..
T Consensus 82 ~~~~~~~~~l~~~~~l--~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~-------- 148 (293)
T 3d4o_A 82 ESIVLTEEMIEKTPNH--CVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH-------- 148 (293)
T ss_dssp CCCBCCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred CCccchHHHHHhCCCC--CEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh--------
Confidence 2336789999999987 9987 89999998 89999999999998 789999999999998863
Q ss_pred HHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc
Q 019387 143 EFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV 222 (342)
Q Consensus 143 ~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (342)
.+.++.|++|||||+|+||+.+|+++ ++||++|++||++++..... ..+ +.
T Consensus 149 ----------------~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~dr~~~~~~~~--~~~-------g~--- 199 (293)
T 3d4o_A 149 ----------------TDFTIHGANVAVLGLGRVGMSVARKF-AALGAKVKVGARESDLLARI--AEM-------GM--- 199 (293)
T ss_dssp ----------------CSSCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHHHH--HHT-------TS---
T ss_pred ----------------cCCCCCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEECCHHHHHHH--HHC-------CC---
Confidence 13578999999999999999999997 79999999999987542111 111 11
Q ss_pred cccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc
Q 019387 223 TWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 223 ~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~ 276 (342)
......++++++++||+|++|+|. ++++++.|+.||+|+++||++||+.
T Consensus 200 ~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 200 EPFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred eecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 111125789999999999999995 7999999999999999999999865
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=1.3e-25 Score=211.33 Aligned_cols=222 Identities=14% Similarity=0.091 Sum_probs=159.5
Q ss_pred CCceEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCC------CHHHHHHHhCCCceEEEec---C-----------C
Q 019387 13 NGKYRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTIL------SVEDIIALIGDKCDGVIGQ---L-----------T 71 (342)
Q Consensus 13 ~~~~~vl~~~~~~~-~~~~~~l~~~~~~v~~~~~~~~~~------~~~e~~~~~~~~~d~vi~~---~-----------~ 71 (342)
|+.|+|++...... ..+.+.|.+.++++.+...++... ..+++.+.+. ++|+++.+ . .
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~s~~a~ 83 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQ-QIDSIILPVSATTGEGVVSTVFSN 83 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGG-GCSEEECCSSCEETTTEECBSSCS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHh-cCCEEEeccccccCCccccccccc
Confidence 35678888754322 335678888899998764332221 1223444444 48999972 1 2
Q ss_pred CC--ccHHHHHHhhccCCceEEEccccCCccC-hhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcC
Q 019387 72 ED--WGETLFAALSRAGGKAFSNMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAG 148 (342)
Q Consensus 72 ~~--~~~e~l~~l~~l~~k~i~~~~~G~d~id-~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g 148 (342)
.+ +++++++.+|++ |+|+ +|+|++| ++++.++||.|+|+|+.+ ++ ++.|+++.+ +|
T Consensus 84 ~~~~~~~~~l~~~~~l--~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g 142 (300)
T 2rir_A 84 EEVVLKQDHLDRTPAH--CVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EG 142 (300)
T ss_dssp SCEECCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HH
T ss_pred CCccchHHHHhhcCCC--CEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HH
Confidence 45 789999999987 8887 8999999 999999999999999974 33 334555444 23
Q ss_pred CCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccC
Q 019387 149 LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS 228 (342)
Q Consensus 149 ~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (342)
.|.. .....+.++.|++|||||+|.||+.+|+++ ++||++|++||++++.. +... .+ +. ......
T Consensus 143 ~~~~--~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~d~~~~~~-~~~~-~~-------g~---~~~~~~ 207 (300)
T 2rir_A 143 TIML--AIQHTDYTIHGSQVAVLGLGRTGMTIARTF-AALGANVKVGARSSAHL-ARIT-EM-------GL---VPFHTD 207 (300)
T ss_dssp HHHH--HHHTCSSCSTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHHH-HT-------TC---EEEEGG
T ss_pred HHHH--HHHhcCCCCCCCEEEEEcccHHHHHHHHHH-HHCCCEEEEEECCHHHH-HHHH-HC-------CC---eEEchh
Confidence 3321 001235789999999999999999999997 79999999999987532 1110 01 11 111135
Q ss_pred CHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc
Q 019387 229 SMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 229 ~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~ 276 (342)
++++++++||+|++|+|. ++++++.|+.||+|+++||++||+.
T Consensus 208 ~l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 208 ELKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp GHHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred hHHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 789999999999999996 7899999999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.87 E-value=5.9e-23 Score=204.48 Aligned_cols=192 Identities=17% Similarity=0.156 Sum_probs=149.4
Q ss_pred EEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEE
Q 019387 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (342)
Q Consensus 90 i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvg 169 (342)
+-..|+|+|++ .++.++||.++|+++.|. +|+|+. +|+++...+....+ |.. ..+..+.|++|+
T Consensus 215 veetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g----~~r--~~~~~l~GktV~ 278 (494)
T 3ce6_A 215 TEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG----INR--GTDALIGGKKVL 278 (494)
T ss_dssp EECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH----HHH--HHCCCCTTCEEE
T ss_pred EEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH----HHh--ccCCCCCcCEEE
Confidence 34789999998 678899999999999999 999953 45555444444333 211 123478999999
Q ss_pred EEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcc
Q 019387 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (342)
Q Consensus 170 IvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~ 249 (342)
|+|+|.||+.+|+++ +++|++|+++|+++........ .+ +. ..+++++++++|+|+.|++
T Consensus 279 IiG~G~IG~~~A~~l-ka~Ga~Viv~d~~~~~~~~A~~---------~G-----a~-~~~l~e~l~~aDvVi~atg---- 338 (494)
T 3ce6_A 279 ICGYGDVGKGCAEAM-KGQGARVSVTEIDPINALQAMM---------EG-----FD-VVTVEEAIGDADIVVTATG---- 338 (494)
T ss_dssp EECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHH---------TT-----CE-ECCHHHHGGGCSEEEECSS----
T ss_pred EEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHH---------cC-----CE-EecHHHHHhCCCEEEECCC----
Confidence 999999999999996 8999999999998764322211 11 11 2478899999999999974
Q ss_pred cccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH-HHHcCCceEEEEecCCCCC----------CCcc----cccccc
Q 019387 250 TYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE-HLKQNPMFRVGLDVFEVTE----------LGFS----SFKHIS 313 (342)
Q Consensus 250 t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~-aL~~g~i~~aaLDV~~~EP----------~~~~----~tPhia 313 (342)
+.++|+.+.|+.||+|++++|+||++. ||+++|.+ +|+++++. +++|+|+.++ +++. .|||++
T Consensus 339 t~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a 417 (494)
T 3ce6_A 339 NKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPS 417 (494)
T ss_dssp SSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCH
T ss_pred CHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCcc
Confidence 567899999999999999999999999 99999998 89888887 6689876533 4555 789998
Q ss_pred ccccc
Q 019387 314 TQDRA 318 (342)
Q Consensus 314 ~~~~~ 318 (342)
..+..
T Consensus 418 ~~~~~ 422 (494)
T 3ce6_A 418 FVMSN 422 (494)
T ss_dssp HHHHH
T ss_pred ccchH
Confidence 76543
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.85 E-value=3.1e-20 Score=180.04 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=169.1
Q ss_pred CCCchHHHHHHHhCCCeEEEecCC--CCCCCHHHHHH-----------HhCCCceEEEecCCCCccHHHHHHhhccCCce
Q 019387 23 PMPGTRWINLLIEQDCRVEICTQK--KTILSVEDIIA-----------LIGDKCDGVIGQLTEDWGETLFAALSRAGGKA 89 (342)
Q Consensus 23 ~~~~~~~~~~l~~~~~~v~~~~~~--~~~~~~~e~~~-----------~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~ 89 (342)
++.|+ ..+.|.+.|++|.+.... ....+.++..+ ... ++|+|+. ...+.++|+....+. ..+
T Consensus 17 ~ltP~-~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~-~adii~~-vk~p~~~e~~~l~~~--~~l 91 (377)
T 2vhw_A 17 AITPA-GVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWA-DADLLLK-VKEPIAAEYGRLRHG--QIL 91 (377)
T ss_dssp SCCHH-HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHH-HCSEEEC-SSCCCGGGGGGCCTT--CEE
T ss_pred CcCHH-HHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhc-cCCEEEE-eCCCChHHHhhcCCC--CEE
Confidence 34444 478888889999764322 23456666652 222 3787754 344566665444443 256
Q ss_pred EEEccccCCccChhHHHhCCeeEe----------cCCCCCchhHHHHHHHHHHHHH-hchHHHHHHHHcCCCCCCCCCcc
Q 019387 90 FSNMAVGYNNVDVNAANKYGIAVG----------NTPGVLTETTAELAASLSLAAA-RRIVEADEFMRAGLYDGWLPNLF 158 (342)
Q Consensus 90 i~~~~~G~d~id~~~~~~~gI~V~----------n~~~~~~~~vAE~~l~~~L~~~-R~~~~~~~~~~~g~w~~w~~~~~ 158 (342)
+.....++|...++.+.++||+++ |.|.++ ++||++..+++.+. |++. ..+.|+|..|..
T Consensus 92 ~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~~a~~~a~r~l~----~~~~g~~~~~~~--- 162 (377)
T 2vhw_A 92 FTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGRLAAQVGAYHLM----RTQGGRGVLMGG--- 162 (377)
T ss_dssp EECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHHHHHHHHHHHTS----GGGTSCCCCTTC---
T ss_pred EEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHHHHHHHHHHHHH----HhcCCCcccccC---
Confidence 666677889989999999999997 555544 56699985554444 6663 233455432221
Q ss_pred cccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC-ccccccCCHHHHhhcC
Q 019387 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLREA 237 (342)
Q Consensus 159 ~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~~a 237 (342)
..++.|++|+|+|+|.||+.+|+.+ +++|++|+++|++++.. +...+.+ +... .......+++++++++
T Consensus 163 -~~~l~g~~V~ViG~G~iG~~~a~~a-~~~Ga~V~~~d~~~~~l-~~~~~~~-------g~~~~~~~~~~~~l~~~l~~a 232 (377)
T 2vhw_A 163 -VPGVEPADVVVIGAGTAGYNAARIA-NGMGATVTVLDINIDKL-RQLDAEF-------CGRIHTRYSSAYELEGAVKRA 232 (377)
T ss_dssp -BTTBCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHT-------TTSSEEEECCHHHHHHHHHHC
T ss_pred -CCCCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHHhc-------CCeeEeccCCHHHHHHHHcCC
Confidence 1368999999999999999999996 79999999999987542 2111111 1100 0001124678889999
Q ss_pred CEEEEcC--CCCcccccccCHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHcCCceEEEEecCCC-CC---------
Q 019387 238 DVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDEVALVEHLKQNPMFRVGLDVFEV-TE--------- 303 (342)
Q Consensus 238 DiV~l~~--pl~~~t~~li~~~~l~~mk~ga~lINva--RG~~vd~~aL~~aL~~g~i~~aaLDV~~~-EP--------- 303 (342)
|+|+.|+ |.+ +|.++++++.++.||+|+++||++ +|+ ||+. ||
T Consensus 233 DvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~ 289 (377)
T 2vhw_A 233 DLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFA 289 (377)
T ss_dssp SEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEE
T ss_pred CEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEE
Confidence 9999976 554 789999999999999999999999 443 6766 65
Q ss_pred -CCcc--ccccccccccc
Q 019387 304 -LGFS--SFKHISTQDRA 318 (342)
Q Consensus 304 -~~~~--~tPhia~~~~~ 318 (342)
+++. .+||+++.+..
T Consensus 290 ~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 290 VHDTLFYCVANMPASVPK 307 (377)
T ss_dssp ETTEEEECBTTGGGGSHH
T ss_pred ECCEEEEecCCcchhhHH
Confidence 5666 89999988743
No 42
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.78 E-value=1.6e-18 Score=169.06 Aligned_cols=145 Identities=20% Similarity=0.293 Sum_probs=110.6
Q ss_pred HHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHH
Q 019387 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARM 183 (342)
Q Consensus 104 ~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~ 183 (342)
...+.+|+|+|++.....+..+...+..-.+...+. +. .+.++.||+|||+|+|+||+.+|++
T Consensus 167 ~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~------ra-----------tg~~L~GktVgIiG~G~IG~~vA~~ 229 (436)
T 3h9u_A 167 QRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK------RA-----------TDVMIAGKTACVCGYGDVGKGCAAA 229 (436)
T ss_dssp HHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH------HH-----------HCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred HcCCCCCceEeechhhhhhhhhccccchHHHHHHHH------Hh-----------cCCcccCCEEEEEeeCHHHHHHHHH
Confidence 345688999999986665544444443333322221 11 2467999999999999999999999
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCC
Q 019387 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (342)
Q Consensus 184 l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk 263 (342)
| ++||++|+++|+++......... + + ...++++++++||+|++ ++.|+++|+++.|+.||
T Consensus 230 L-ka~Ga~Viv~D~~p~~a~~A~~~---------G-----~-~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK 289 (436)
T 3h9u_A 230 L-RGFGARVVVTEVDPINALQAAME---------G-----Y-QVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMR 289 (436)
T ss_dssp H-HHTTCEEEEECSCHHHHHHHHHT---------T-----C-EECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCC
T ss_pred H-HHCCCEEEEECCChhhhHHHHHh---------C-----C-eecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcC
Confidence 7 89999999999987543222111 1 1 23589999999999996 45789999999999999
Q ss_pred CCcEEEEcCCCcc-cCHHHHHHH
Q 019387 264 KEAILVNCSRGPV-IDEVALVEH 285 (342)
Q Consensus 264 ~ga~lINvaRG~~-vd~~aL~~a 285 (342)
+|+++||+|||+. ||.++|.+.
T Consensus 290 ~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 290 DDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp TTEEEEECSSSGGGBCHHHHHHH
T ss_pred CCcEEEEeCCCCCccCHHHHHhh
Confidence 9999999999997 999999874
No 43
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.75 E-value=6.5e-18 Score=164.90 Aligned_cols=240 Identities=14% Similarity=0.121 Sum_probs=154.2
Q ss_pred CCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHHHH---------hCCCceEEEecCCCCccHHHHHHhhccCCceEEE
Q 019387 24 MPGTRWINLLIEQDCRVEICTQKK--TILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 24 ~~~~~~~~~l~~~~~~v~~~~~~~--~~~~~~e~~~~---------~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~ 92 (342)
+.|+ ..+.|.+.|++|.+..... ..++.++..+. +.. +|+++... .+ .++.++.++. +.++|+.
T Consensus 25 ltP~-~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~-adiil~vk-~p-~~~~i~~l~~-~~~li~~ 99 (401)
T 1x13_A 25 ATPK-TVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQ-SEIILKVN-AP-LDDEIALLNP-GTTLVSF 99 (401)
T ss_dssp CCHH-HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGS-SSEEECSS-CC-CHHHHTTCCT-TCEEEEC
T ss_pred CCHH-HHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhc-CCeEEEeC-CC-CHHHHHHhcC-CCcEEEE
Confidence 3443 4678888899997754322 24577777654 433 89887542 23 4666777632 3499999
Q ss_pred ccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHH---HHHHhchHHHHHHHHcCCC--CCCCCCc--ccccccCC
Q 019387 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLS---LAAARRIVEADEFMRAGLY--DGWLPNL--FVGNLLKG 165 (342)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~---L~~~R~~~~~~~~~~~g~w--~~w~~~~--~~~~~L~g 165 (342)
.+.|+|++|++++.++||++.+ .++|+|++.++. ++..+.+.. ...++.+.| .+|.... ..| ++.|
T Consensus 100 ~~~~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g-~l~g 172 (401)
T 1x13_A 100 IWPAQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFFTGQITAAG-KVPP 172 (401)
T ss_dssp CCGGGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTE-EECC
T ss_pred ecCCCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhcccccCCceeecc-CcCC
Confidence 9999999999999999999964 444555444432 222222221 223332222 2222110 011 5789
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccC-----CCCcccc----------ccCCH
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-----EQPVTWK----------RASSM 230 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----------~~~~l 230 (342)
++|+|+|.|.||..+++.+ +++|++|+++|+++...... ..++.....-. ...-++. ...++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a-~~~Ga~V~v~D~~~~~~~~~--~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAA-NSLGAIVRAFDTRPEVKEQV--QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCGGGHHHH--HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHH--HHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 9999999999999999996 89999999999987542111 11110000000 0000000 00147
Q ss_pred HHHhhcCCEEEEc--CCCCcccccccCHHHHhcCCCCcEEEEcC--CCcccCH
Q 019387 231 DEVLREADVISLH--PVLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (342)
Q Consensus 231 ~~ll~~aDiV~l~--~pl~~~t~~li~~~~l~~mk~ga~lINva--RG~~vd~ 279 (342)
++++.++|+|+.| +|. ..+.++++++.++.||+|+++||++ ||+.+++
T Consensus 250 ~e~~~~aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHhCCCCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 8888999999999 553 3477899999999999999999999 9998876
No 44
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.75 E-value=5.9e-18 Score=164.87 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=104.5
Q ss_pred hCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHh
Q 019387 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~ 186 (342)
...++++|+.+. +..+-+-....+.+.+..... |. .+.++.||||||+|+|.||+.+|+++ +
T Consensus 206 ~L~~PvinVnds----~tK~~fDn~yG~~eslvdgI~--Ra-----------tg~~L~GKTVgVIG~G~IGr~vA~~l-r 267 (464)
T 3n58_A 206 LLPFPAINVNDS----VTKSKFDNKYGCKESLVDGIR--RG-----------TDVMMAGKVAVVCGYGDVGKGSAQSL-A 267 (464)
T ss_dssp CCCSCEEECTTS----HHHHTTHHHHHHHHHHHHHHH--HH-----------HCCCCTTCEEEEECCSHHHHHHHHHH-H
T ss_pred CCCCCEEeeccH----hhhhhhhhhhcchHHHHHHHH--Hh-----------cCCcccCCEEEEECcCHHHHHHHHHH-H
Confidence 345788888764 444444333333333322211 11 24679999999999999999999996 8
Q ss_pred cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCc
Q 019387 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (342)
Q Consensus 187 afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga 266 (342)
+|||+|+++|+.+....+.... ++ ...++++++++||+|+++. .|+++|+++.|++||+|+
T Consensus 268 afGa~Viv~d~dp~~a~~A~~~--------------G~-~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GA 328 (464)
T 3n58_A 268 GAGARVKVTEVDPICALQAAMD--------------GF-EVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMC 328 (464)
T ss_dssp HTTCEEEEECSSHHHHHHHHHT--------------TC-EECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTE
T ss_pred HCCCEEEEEeCCcchhhHHHhc--------------Cc-eeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCe
Confidence 9999999999877543222111 11 2358999999999999864 578999999999999999
Q ss_pred EEEEcCCCcc-cCHHHHHH
Q 019387 267 ILVNCSRGPV-IDEVALVE 284 (342)
Q Consensus 267 ~lINvaRG~~-vd~~aL~~ 284 (342)
+|||+|||+. ||.++|.+
T Consensus 329 ILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 329 IVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp EEEECSSSTTTBTCGGGTT
T ss_pred EEEEcCCCCcccCHHHHHh
Confidence 9999999998 99999874
No 45
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.71 E-value=8.4e-17 Score=156.18 Aligned_cols=245 Identities=14% Similarity=0.162 Sum_probs=150.3
Q ss_pred CCCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHH-----------HHhCCCceEEEecCCCCc----cHHHHHHhhcc
Q 019387 23 PMPGTRWINLLIEQDCRVEICTQKK--TILSVEDII-----------ALIGDKCDGVIGQLTEDW----GETLFAALSRA 85 (342)
Q Consensus 23 ~~~~~~~~~~l~~~~~~v~~~~~~~--~~~~~~e~~-----------~~~~~~~d~vi~~~~~~~----~~e~l~~l~~l 85 (342)
++.|+ ..+.|.+.|++|.+..... ..++.++.. +.+. ++|+|+... .++ +++.++.++.
T Consensus 17 ~l~P~-~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~-~adiil~v~-~p~~~~~~~~~i~~l~~- 92 (384)
T 1l7d_A 17 AISPE-VVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALS-QADVVWKVQ-RPMTAEEGTDEVALIKE- 92 (384)
T ss_dssp SCCHH-HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHS-SCSEEEEEE-CCCCGGGSCCGGGGSCT-
T ss_pred CCCHH-HHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhc-CCCEEEEec-CcccccCCHHHHHhhcc-
Confidence 34444 4678888899997744322 345666665 3344 489888653 344 5677777764
Q ss_pred CCceEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCC--CCCCCcccc-cc
Q 019387 86 GGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD--GWLPNLFVG-NL 162 (342)
Q Consensus 86 ~~k~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~--~w~~~~~~~-~~ 162 (342)
+.++++....+.|+.+++++.++||.+++.. ...+.+++..+. +|+..+++ ..+..+..+.|. +|.+....+ .+
T Consensus 93 ~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e-~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~ 169 (384)
T 1l7d_A 93 GAVLMCHLGALTNRPVVEALTKRKITAYAME-LMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGT 169 (384)
T ss_dssp TCEEEEECCGGGCHHHHHHHHHTTCEEEEGG-GCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEE
T ss_pred CCEEEEEecccCCHHHHHHHHHCCCEEEEec-cccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCC
Confidence 3478888889999999999999999999731 111111111222 22222221 112222222221 121111111 36
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhh---ccC----CCCccccc---------
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANG----EQPVTWKR--------- 226 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~--------- 226 (342)
+.|++|+|+|.|.||+.+++.+ +++|++|+++|+++...... ..++.... ... ...-++..
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a-~~~Ga~V~~~d~~~~~~~~~--~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~ 246 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATA-KRLGAVVMATDVRAATKEQV--ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKK 246 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCSTTHHHH--HHTTCEECCC-----------------------CC
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--HHcCCeEEeecccccccccccccchhhcCHHHHhh
Confidence 8999999999999999999995 89999999999987542111 11211000 000 00000000
Q ss_pred -cCCHHHHhhcCCEEEEcC--CCCcccccccCHHHHhcCCCCcEEEEcC--CCcccC
Q 019387 227 -ASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVID 278 (342)
Q Consensus 227 -~~~l~~ll~~aDiV~l~~--pl~~~t~~li~~~~l~~mk~ga~lINva--RG~~vd 278 (342)
...+++++.++|+|+.|+ |.+ .+.++++++.++.||+|+++||++ ||+.++
T Consensus 247 ~~~~l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 247 QAEAVLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred hHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCee
Confidence 012788899999999887 433 356889999999999999999999 887654
No 46
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.70 E-value=1.2e-18 Score=170.47 Aligned_cols=121 Identities=23% Similarity=0.322 Sum_probs=97.2
Q ss_pred ccc-cCCCeEEEEecCHHHHHHHHHHHhc-CCcEEEEEc-CCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc
Q 019387 160 GNL-LKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIYYD-LYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 160 ~~~-L~gktvgIvG~G~IG~~vA~~l~~a-fg~~V~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 236 (342)
|.+ |+||||||+|+|+||+.+|+++ ++ |||+|++++ ++... + .+ ...+++++++.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l-~~~~G~kVv~~sD~~g~~--------~---------~~----~gvdl~~L~~~ 263 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIM-SEDFGMKVVAVSDSKGGI--------Y---------NP----DGLNADEVLKW 263 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEE--------E---------EE----EEECHHHHHHH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHH-HHhcCCEEEEEeCCCccc--------c---------Cc----cCCCHHHHHHH
Confidence 356 9999999999999999999997 79 999999994 43210 0 00 11256777765
Q ss_pred CCE-EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC-----------C
Q 019387 237 ADV-ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE-----------L 304 (342)
Q Consensus 237 aDi-V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP-----------~ 304 (342)
+|. .++ +|+ ++|++ |+.+.|..||+ .+|||++||++||+++ +++|+++.|.+++ +|| +
T Consensus 264 ~d~~~~l-~~l-~~t~~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~ 333 (419)
T 1gtm_A 264 KNEHGSV-KDF-PGATN-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEK 333 (419)
T ss_dssp HHHHSSS-TTC-TTSEE-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHT
T ss_pred HHhcCEe-ecC-ccCee-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcC
Confidence 554 333 566 67888 89999999998 5999999999999999 6999999999988 777 7
Q ss_pred Cccccccc
Q 019387 305 GFSSFKHI 312 (342)
Q Consensus 305 ~~~~tPhi 312 (342)
|+++|||+
T Consensus 334 ~V~itPhi 341 (419)
T 1gtm_A 334 GILQIPDF 341 (419)
T ss_dssp TCEEECHH
T ss_pred CEEEECch
Confidence 99999999
No 47
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.70 E-value=9.8e-17 Score=156.05 Aligned_cols=140 Identities=19% Similarity=0.297 Sum_probs=104.1
Q ss_pred hCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHh
Q 019387 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~ 186 (342)
+..++|+|+++....+--+-.-+.--++...+. +. .+..+.||+|+|+|+|.||+.+|+++ +
T Consensus 179 ~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~------ra-----------t~~~L~GktV~ViG~G~IGk~vA~~L-r 240 (435)
T 3gvp_A 179 KLCVPAMNVNDSVTKQKFDNLYCCRESILDGLK------RT-----------TDMMFGGKQVVVCGYGEVGKGCCAAL-K 240 (435)
T ss_dssp CCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHH------HH-----------HCCCCTTCEEEEECCSHHHHHHHHHH-H
T ss_pred CCCCCEEEecchhhhhhhhhhhhhHHHHHHHHH------Hh-----------hCceecCCEEEEEeeCHHHHHHHHHH-H
Confidence 467999999886655544432222222221111 11 23579999999999999999999996 8
Q ss_pred cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCc
Q 019387 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (342)
Q Consensus 187 afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga 266 (342)
+||++|+++|+++......... + + ...++++++++||+|++| +.|+++|+++.|+.||+|+
T Consensus 241 a~Ga~Viv~D~dp~ra~~A~~~---------G-----~-~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~ga 301 (435)
T 3gvp_A 241 AMGSIVYVTEIDPICALQACMD---------G-----F-RLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSC 301 (435)
T ss_dssp HTTCEEEEECSCHHHHHHHHHT---------T-----C-EECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTE
T ss_pred HCCCEEEEEeCChhhhHHHHHc---------C-----C-EeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCc
Confidence 9999999999987543222111 1 1 235899999999999996 4689999999999999999
Q ss_pred EEEEcCCCcc-cCHHHHH
Q 019387 267 ILVNCSRGPV-IDEVALV 283 (342)
Q Consensus 267 ~lINvaRG~~-vd~~aL~ 283 (342)
++||+|||+. +|.++|.
T Consensus 302 ilINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 302 IVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp EEEECSSTTTTBTGGGGC
T ss_pred EEEEecCCCccCCHHHHH
Confidence 9999999998 7877774
No 48
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.69 E-value=7e-16 Score=148.92 Aligned_cols=227 Identities=15% Similarity=0.166 Sum_probs=145.2
Q ss_pred CCCchHHHHHHHhCCCeEEEecCC--CCCCCHHHHHHH---------hCCCceEEEecCCCCccHHHHHHhhccCCceEE
Q 019387 23 PMPGTRWINLLIEQDCRVEICTQK--KTILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 23 ~~~~~~~~~~l~~~~~~v~~~~~~--~~~~~~~e~~~~---------~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~ 91 (342)
++.|+ ..+.|.+.|++|.+.... ....+.++..+. +. ++|+|+.. ..+..++ ++.++. +.++++
T Consensus 17 ~l~P~-~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~v-k~p~~~~-~~~l~~-~~~~~~ 91 (369)
T 2eez_A 17 ALTPG-GVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVKV-KEPLPEE-YGFLRE-GLILFT 91 (369)
T ss_dssp SSCHH-HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEECS-SCCCGGG-GGGCCT-TCEEEE
T ss_pred CcCHH-HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEEE-CCCCHHH-HhhcCC-CcEEEE
Confidence 34444 478888899999764432 135677777641 33 58988744 3344444 555532 348888
Q ss_pred EccccCCccChhHHHhCCeeEe---cCCCC-Cc----hhHHHHHH--HHHHHHHhchHHHHHHHHcCCCCCCCCCccccc
Q 019387 92 NMAVGYNNVDVNAANKYGIAVG---NTPGV-LT----ETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGN 161 (342)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~V~---n~~~~-~~----~~vAE~~l--~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~ 161 (342)
....+.|..+++.+.++||.+. +.+.. .. .++++.+- +.++++. .+.... .|. ..|.. ...
T Consensus 92 ~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~~-~l~~~~----~g~-~~~~~---~~~ 162 (369)
T 2eez_A 92 YLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGAQ-FLEKPK----GGR-GVLLG---GVP 162 (369)
T ss_dssp CCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHHH-HTSGGG----TSC-CCCTT---CBT
T ss_pred EecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHHH-HHHHhc----CCC-ceecC---CCC
Confidence 8888999999999999999997 44443 11 44454443 3333332 222111 121 01111 114
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC-ccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~~aDiV 240 (342)
++.+++|+|+|.|.||+.+|+.+ +++|++|+++|++++.. +.....+ +... .......++++++.++|+|
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l-~~~Ga~V~~~d~~~~~~-~~~~~~~-------g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIA-LGMGAQVTILDVNHKRL-QYLDDVF-------GGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHT-------TTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHhc-------CceEEEecCCHHHHHHHHhCCCEE
Confidence 68999999999999999999996 79999999999987542 2111111 1100 0011124678889999999
Q ss_pred EEcCCCCc-ccccccCHHHHhcCCCCcEEEEcC
Q 019387 241 SLHPVLDK-TTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 241 ~l~~pl~~-~t~~li~~~~l~~mk~ga~lINva 272 (342)
+.|++.+. .+..++.++.++.||+|+.+||++
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998765 688999999999999999999998
No 49
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.37 E-value=7.6e-11 Score=113.44 Aligned_cols=250 Identities=12% Similarity=0.099 Sum_probs=142.0
Q ss_pred CCCCceEEEEeCC---------CCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHHHHhC-----CCceEEEecCCCCc
Q 019387 11 NPNGKYRVVSTKP---------MPGTRWINLLIEQDCRVEICTQKK--TILSVEDIIALIG-----DKCDGVIGQLTEDW 74 (342)
Q Consensus 11 ~~~~~~~vl~~~~---------~~~~~~~~~l~~~~~~v~~~~~~~--~~~~~~e~~~~~~-----~~~d~vi~~~~~~~ 74 (342)
.|-++|+|=+.+. +.|+ ..+.|.+.|++|.+..... ...+.++..+.-. +.+|+|+.- .. .
T Consensus 18 ~~~~~m~IgvpkE~~~~E~RValtP~-~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlkV-k~-p 94 (381)
T 3p2y_A 18 GPGSMTLIGVPRESAEGERRVALVPK-VVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVKV-NP-P 94 (381)
T ss_dssp --CTTCEEEECCCCSTTCCCCSSCHH-HHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEECS-SC-C
T ss_pred CCCcceEEEEEecCCCCCceecCCHH-HHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEEe-CC-C
Confidence 3556677766432 2233 4788888999998765432 4567777765321 236766632 22 2
Q ss_pred cHHHHHHhhccCCceEEEc-cccCCccChhHHHhCCeeEec---CCCCC-c------hhHHHHHHHHHHHHHhchHHHHH
Q 019387 75 GETLFAALSRAGGKAFSNM-AVGYNNVDVNAANKYGIAVGN---TPGVL-T------ETTAELAASLSLAAARRIVEADE 143 (342)
Q Consensus 75 ~~e~l~~l~~l~~k~i~~~-~~G~d~id~~~~~~~gI~V~n---~~~~~-~------~~vAE~~l~~~L~~~R~~~~~~~ 143 (342)
.++.++.++. | +.+... -...|.=-++.+.++||...- .|... + .+++|.+=-+.. ..+.+
T Consensus 95 ~~~e~~~l~~-g-~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av------~~aa~ 166 (381)
T 3p2y_A 95 TSDEISQLKP-G-SVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAV------LLGAS 166 (381)
T ss_dssp CHHHHTTSCT-T-CEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHH------HHHHH
T ss_pred ChhHHhhccC-C-CEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHH------HHHHH
Confidence 3455566654 2 444332 222333335778899988754 33211 1 223333221111 11110
Q ss_pred HHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-----cC
Q 019387 144 FMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-----NG 218 (342)
Q Consensus 144 ~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~-----~~ 218 (342)
. -+...+ -....-..+.+++|+|+|+|.||..+|+.+ +++|++|++||+++... +... .++..... .+
T Consensus 167 ~--l~~~~~--~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l-~~~~-~lGa~~~~l~~~~~~ 239 (381)
T 3p2y_A 167 L--STRFVP--MLTTAAGTVKPASALVLGVGVAGLQALATA-KRLGAKTTGYDVRPEVA-EQVR-SVGAQWLDLGIDAAG 239 (381)
T ss_dssp H--CSSCSS--CEECSSCEECCCEEEEESCSHHHHHHHHHH-HHHTCEEEEECSSGGGH-HHHH-HTTCEECCCC-----
T ss_pred H--hhhhhh--hhhcccCCcCCCEEEEECchHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH-HcCCeEEeccccccc
Confidence 0 111000 000011357899999999999999999996 89999999999998642 1111 11100000 00
Q ss_pred CCCc--------cccccCCHHHHhhcCCEEEEcC--CCCcccccccCHHHHhcCCCCcEEEEcC--CCcccCH
Q 019387 219 EQPV--------TWKRASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (342)
Q Consensus 219 ~~~~--------~~~~~~~l~~ll~~aDiV~l~~--pl~~~t~~li~~~~l~~mk~ga~lINva--RG~~vd~ 279 (342)
.... ......++++++++||+|+.++ |. ..+..+|+++.++.||+|+++||++ +|+.++.
T Consensus 240 ~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~ 311 (381)
T 3p2y_A 240 EGGYARELSEAERAQQQQALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCEL 311 (381)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred cccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcccc
Confidence 0000 0011246789999999999875 53 3467899999999999999999998 8877663
No 50
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.31 E-value=3.1e-12 Score=120.27 Aligned_cols=119 Identities=12% Similarity=0.066 Sum_probs=91.6
Q ss_pred cccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 159 ~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.......++|||||+|.||..+|+.| ...|.+|.+||++++.. +.+. .. +.....++++++++||
T Consensus 15 ~~~~~~m~~I~iIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~-~~l~--------~~-----g~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 15 VPRGSHMMEVGFLGLGIMGKAMSMNL-LKNGFKVTVWNRTLSKC-DELV--------EH-----GASVCESPAEVIKKCK 79 (310)
T ss_dssp ---CCCSCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGG-HHHH--------HT-----TCEECSSHHHHHHHCS
T ss_pred CcccccCCEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHHH--------HC-----CCeEcCCHHHHHHhCC
Confidence 33455668999999999999999998 47799999999987643 2211 11 1234578999999999
Q ss_pred EEEEcCCCCccccccc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 239 VISLHPVLDKTTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 239 iV~l~~pl~~~t~~li--~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|++|+|....++.++ .+..+..+++|.++||++.......+.+.+.+.+..+.
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 9999999766777666 24566789999999999999988888999988775544
No 51
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.31 E-value=4.9e-13 Score=130.46 Aligned_cols=169 Identities=14% Similarity=0.213 Sum_probs=120.5
Q ss_pred ceEEEccccCCccChhHHH-----hCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCC-CCCCCcccc-
Q 019387 88 KAFSNMAVGYNNVDVNAAN-----KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD-GWLPNLFVG- 160 (342)
Q Consensus 88 k~i~~~~~G~d~id~~~~~-----~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~-~w~~~~~~~- 160 (342)
+.|...++|+|++++..+. ++++.+++.+|. ..+++++.+..++.+.|++...... ..+.|. .|..-...+
T Consensus 83 ~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~~a~~ 160 (404)
T 1gpj_A 83 RHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVELAER 160 (404)
T ss_dssp HHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHHHHHH
T ss_pred hhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHHHHHH
Confidence 6677889999999998887 888999999887 5689999999999999987644322 122221 000000001
Q ss_pred --cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC
Q 019387 161 --NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 161 --~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 237 (342)
.++.|++|+|+|.|.||+.+++.+ +++|+ +|+++|++++.. +.+...+ +.. .....++++++.++
T Consensus 161 ~~~~l~g~~VlIiGaG~iG~~~a~~l-~~~G~~~V~v~~r~~~ra-~~la~~~-------g~~---~~~~~~l~~~l~~a 228 (404)
T 1gpj_A 161 ELGSLHDKTVLVVGAGEMGKTVAKSL-VDRGVRAVLVANRTYERA-VELARDL-------GGE---AVRFDELVDHLARS 228 (404)
T ss_dssp HHSCCTTCEEEEESCCHHHHHHHHHH-HHHCCSEEEEECSSHHHH-HHHHHHH-------TCE---ECCGGGHHHHHHTC
T ss_pred HhccccCCEEEEEChHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHc-------CCc---eecHHhHHHHhcCC
Confidence 147899999999999999999997 78999 999999987542 1111111 111 11124788889999
Q ss_pred CEEEEcCCCCcccccccCHHHHhc--C----CCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLAT--M----KKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~--m----k~ga~lINvaR 273 (342)
|+|+.|+| .+..+++++.++. | +++.++||++.
T Consensus 229 DvVi~at~---~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 229 DVVVSATA---APHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp SEEEECCS---SSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred CEEEEccC---CCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 99999986 4567788888887 4 35678888873
No 52
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.31 E-value=8.8e-12 Score=119.11 Aligned_cols=108 Identities=23% Similarity=0.304 Sum_probs=86.6
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-cCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~aDiV 240 (342)
+|.||||+|+|+|+||+.+|+++ ++||++|+++|+++.. ..+...+ + . ...+.++++. .||++
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l-~~~GakVvvsD~~~~~--~~~a~~~-------g-----a-~~v~~~ell~~~~DIl 235 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLA-AEAGAQLLVADTDTER--VAHAVAL-------G-----H-TAVALEDVLSTPCDVF 235 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH--HHHHHHT-------T-----C-EECCGGGGGGCCCSEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEeCCccH--HHHHHhc-------C-----C-EEeChHHhhcCcccee
Confidence 68999999999999999999996 7999999999987643 2211111 1 1 1236677887 89999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+-| .+.+.|+++.++.|| ..+++|.+|+++.++++ .++|+++++.
T Consensus 236 iP~-----A~~~~I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 236 APC-----AMGGVITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp EEC-----SCSCCBCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred cHh-----HHHhhcCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 853 578999999999998 78999999999999888 5889888643
No 53
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.28 E-value=1.9e-10 Score=111.47 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=132.0
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHHHHhC--------CCceEEEecCCCCccHHHHHHhhccCCceEEEccccCC
Q 019387 29 WINLLIEQDCRVEICTQKK--TILSVEDIIALIG--------DKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYN 98 (342)
Q Consensus 29 ~~~~l~~~~~~v~~~~~~~--~~~~~~e~~~~~~--------~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~G~d 98 (342)
-.+.|.+.|++|.+..... ...+.++..+.-. +++|+|+.-.. + .++.++.++. |-.++...-..-|
T Consensus 47 ~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkVk~-p-~~~e~~~l~~-g~~l~~~lh~~~~ 123 (405)
T 4dio_A 47 SVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVRR-P-SAQEISGYRS-GAVVIAIMDPYGN 123 (405)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEEEC-C-CTTTGGGSCT-TCEEEEECCCTTC
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEeCC-C-ChhHHhhcCC-CcEEEEEeccccC
Confidence 4788888999998765432 3456666654211 13677664211 1 2233444543 2123333222223
Q ss_pred ccChhHHHhCCeeEec---CCCCC-c------hhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCccc-ccccCCCe
Q 019387 99 NVDVNAANKYGIAVGN---TPGVL-T------ETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFV-GNLLKGQT 167 (342)
Q Consensus 99 ~id~~~~~~~gI~V~n---~~~~~-~------~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~-~~~L~gkt 167 (342)
.=-++.+.++||...- .|... + .+++|.+=-+. ...+.+. -+ +..+.... -..+.+.+
T Consensus 124 ~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~A------v~~aa~~--l~---~~~~~l~t~~g~v~~~k 192 (405)
T 4dio_A 124 EEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQA------VIDAAYE--YD---RALPMMMTAAGTVPAAK 192 (405)
T ss_dssp HHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHH------HHHHHHH--CS---SCSSCEEETTEEECCCE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHH------HHHHHHH--hH---hhhchhhccCCCcCCCE
Confidence 3335778889988754 33211 1 12333322111 1111110 01 10011011 13578999
Q ss_pred EEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhh-hh------ccCCCCcccc----------ccCCH
Q 019387 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF-LK------ANGEQPVTWK----------RASSM 230 (342)
Q Consensus 168 vgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~----------~~~~l 230 (342)
|+|+|.|.||..+|+.+ +++|++|++||+++... +.. ..++.. .. .++.....+. ...++
T Consensus 193 V~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l-~~~-~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 193 IFVMGAGVAGLQAIATA-RRLGAVVSATDVRPAAK-EQV-ASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEECSSTTHH-HHH-HHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHH-HHCCCEEEEEcCCHHHH-HHH-HHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 99999999999999996 89999999999998642 211 111110 00 0000000011 12378
Q ss_pred HHHhhcCCEEEEcC--CCCcccccccCHHHHhcCCCCcEEEEcC--CCcccCH
Q 019387 231 DEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (342)
Q Consensus 231 ~~ll~~aDiV~l~~--pl~~~t~~li~~~~l~~mk~ga~lINva--RG~~vd~ 279 (342)
++++++||+|+.++ |. ..+..+++++.++.||+|+++||++ +|+.++.
T Consensus 270 ~e~l~~aDVVI~tvlipg-~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPG-RPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHTCSEEEECCCCSS-SCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHhcCCCEEEECCcCCC-CCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 89999999999875 53 2567899999999999999999998 8887755
No 54
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.27 E-value=2.4e-11 Score=114.36 Aligned_cols=131 Identities=14% Similarity=0.049 Sum_probs=84.5
Q ss_pred HHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc-hhHHHHHHhhhhhhhhccCC
Q 019387 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGE 219 (342)
Q Consensus 142 ~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~ 219 (342)
++..+.+.|.+|.+.... .....++|||||+|.||..+|+.|+ ..|. +|.+||+++ ....+...+ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~I~iIG~G~mG~~~A~~L~-~~G~~~V~~~dr~~~~~~~~~~~~--------~-- 69 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLY-FQSNAMKLGFIGFGEAASAIASGLR-QAGAIDMAAYDAASAESWRPRAEE--------L-- 69 (312)
T ss_dssp ------------------------CEEEEECCSHHHHHHHHHHH-HHSCCEEEEECSSCHHHHHHHHHH--------T--
T ss_pred CcccccccccccCccccc-ccCCCCEEEEECccHHHHHHHHHHH-HCCCCeEEEEcCCCCHHHHHHHHH--------C--
Confidence 355677778776544322 2334579999999999999999984 6688 999999973 333222111 1
Q ss_pred CCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 220 QPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 220 ~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
+.....++++++++||+|++|+|...... .+ .+....+++|.++||++........++.+.+.+.
T Consensus 70 ---g~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 70 ---GVSCKASVAEVAGECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp ---TCEECSCHHHHHHHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred ---CCEEeCCHHHHHhcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 12235689999999999999999765544 23 5667789999999999999988899999988765
No 55
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.26 E-value=7.2e-12 Score=117.61 Aligned_cols=117 Identities=14% Similarity=0.124 Sum_probs=93.0
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+...++|||||+|.||+.+|+.| ...|.+|++||++++.. +.+.+ . +.....++++++++||+|
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~-~~~~~--------~-----g~~~~~~~~e~~~~aDvV 69 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVL-LKQGKRVAIWNRSPGKA-AALVA--------A-----GAHLCESVKAALSASPAT 69 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHH-HHHHH--------H-----TCEECSSHHHHHHHSSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHH--------C-----CCeecCCHHHHHhcCCEE
Confidence 345678999999999999999998 57899999999987543 22111 1 122357899999999999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
++|+|.+..++.++..+.+..+++|.++||++++...+.+.+.+.+++..+.
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred EEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 9999987677877764346667899999999999999999999999876554
No 56
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.25 E-value=7.6e-12 Score=117.35 Aligned_cols=115 Identities=19% Similarity=0.237 Sum_probs=93.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
|+||+||+|+||..+|++|+ .-|.+|++||++++.. +.+.+ .+.....++.|+++.||+|++|+|
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~-~~G~~v~v~dr~~~~~-~~l~~-------------~Ga~~a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLL-KAGYLLNVFDLVQSAV-DGLVA-------------AGASAARSARDAVQGADVVISMLP 68 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSSHHHH-HHHHH-------------TTCEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEeeehHHHHHHHHHHH-hCCCeEEEEcCCHHHH-HHHHH-------------cCCEEcCCHHHHHhcCCceeecCC
Confidence 68999999999999999985 6699999999987643 22211 123346799999999999999999
Q ss_pred CCcccccccCH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEe
Q 019387 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD 297 (342)
Q Consensus 246 l~~~t~~li~~--~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLD 297 (342)
..+..+.++.. ..++.+++|.++||++....-+...+.+.+++..+. .+|
T Consensus 69 ~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lD 120 (300)
T 3obb_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLD 120 (300)
T ss_dssp CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 98888877643 478889999999999999999999999999887664 345
No 57
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.24 E-value=8.5e-12 Score=117.85 Aligned_cols=116 Identities=13% Similarity=0.099 Sum_probs=92.6
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
...++|||||+|.||..+|+.| ...|.+|.+||++++.. +.+. .. +.....++++++++||+|++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~-~~l~--------~~-----g~~~~~~~~e~~~~aDvVi~ 93 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRL-CEAGYALQVWNRTPARA-ASLA--------AL-----GATIHEQARAAARDADIVVS 93 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHH-HHTTCEEEEECSCHHHH-HHHH--------TT-----TCEEESSHHHHHTTCSEEEE
T ss_pred cCCCEEEEECccHHHHHHHHHH-HhCCCeEEEEcCCHHHH-HHHH--------HC-----CCEeeCCHHHHHhcCCEEEE
Confidence 4567999999999999999998 47799999999987642 2211 11 22345799999999999999
Q ss_pred cCCCCcccccccCH-HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 019387 243 HPVLDKTTYHLINK-ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 243 ~~pl~~~t~~li~~-~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~ 293 (342)
|+|.+...+.++.. ..+..+++|.++||++++...+.+.+.+.+++..+..
T Consensus 94 ~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~ 145 (320)
T 4dll_A 94 MLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAH 145 (320)
T ss_dssp CCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred ECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEE
Confidence 99976677766653 5677899999999999999999999999998765543
No 58
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.23 E-value=1.2e-11 Score=115.71 Aligned_cols=120 Identities=13% Similarity=0.179 Sum_probs=92.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||..+|++|+ .-|.+|++||++++.. +. ....+.....++.|++++||+|++|+|
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~-~~G~~V~v~dr~~~~~-~~-------------l~~~G~~~~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILL-EAGYELVVWNRTASKA-EP-------------LTKLGATVVENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEC--------CT-------------TTTTTCEECSSGGGGCCTTCEEEECCS
T ss_pred CcEEEEecHHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HH-------------HHHcCCeEeCCHHHHHhcCCceeeecc
Confidence 58999999999999999985 6799999999987542 11 111233456799999999999999999
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
..+.....+....+..+++|.++||.+....-+...+.+.+++..+...--=|.-
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred chhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCC
Confidence 8888888888889999999999999999999999999999988766543333333
No 59
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.19 E-value=7.6e-11 Score=113.17 Aligned_cols=124 Identities=15% Similarity=0.223 Sum_probs=98.0
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC---CE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA---DV 239 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a---Di 239 (342)
+.+++|||||+|.||+.+|+.| ...|.+|.+||++++.. +.+. .. +.....+++++++.+ |+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L-~~~G~~V~v~dr~~~~~-~~l~--------~~-----g~~~~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRL-RKGGHECVVYDLNVNAV-QALE--------RE-----GIAGARSIEEFCAKLVKPRV 84 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHH--------TT-----TCBCCSSHHHHHHHSCSSCE
T ss_pred hcCCEEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHH--------HC-----CCEEeCCHHHHHhcCCCCCE
Confidence 4578999999999999999998 57899999999987542 2211 11 222357899999999 99
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE 303 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP 303 (342)
|++|+|.. .+..++ ...+..+++|.++||++.+...+...+.+.+++..+......|+-.++
T Consensus 85 Vi~~vp~~-~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~ 146 (358)
T 4e21_A 85 VWLMVPAA-VVDSML-QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIF 146 (358)
T ss_dssp EEECSCGG-GHHHHH-HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGG
T ss_pred EEEeCCHH-HHHHHH-HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHH
Confidence 99999976 777766 566788999999999999999999999999988777766666665544
No 60
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.19 E-value=1.3e-10 Score=114.86 Aligned_cols=153 Identities=18% Similarity=0.252 Sum_probs=101.7
Q ss_pred ccccCCccC-hhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEE
Q 019387 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 93 ~~~G~d~id-~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIv 171 (342)
.++|+..+. ........|+|+|+++....+..+-..+.--++...+ .+ ..+..+.||+++|+
T Consensus 209 TttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi------~r-----------~tg~~L~GKtVvVt 271 (488)
T 3ond_A 209 TTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL------MR-----------ATDVMIAGKVAVVA 271 (488)
T ss_dssp SHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH------HH-----------HHCCCCTTCEEEEE
T ss_pred ccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHHHH------HH-----------HcCCcccCCEEEEE
Confidence 345655432 1122245699999988655542222222111111111 01 12356899999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019387 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~ 251 (342)
|+|.||+.+|++| +++|++|+++|+++....+.... + + ...++++++..+|+|+.+. .+.
T Consensus 272 GaGgIG~aiA~~L-aa~GA~Viv~D~~~~~a~~Aa~~---------g-----~-dv~~lee~~~~aDvVi~at----G~~ 331 (488)
T 3ond_A 272 GYGDVGKGCAAAL-KQAGARVIVTEIDPICALQATME---------G-----L-QVLTLEDVVSEADIFVTTT----GNK 331 (488)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHHT---------T-----C-EECCGGGTTTTCSEEEECS----SCS
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHHHHh---------C-----C-ccCCHHHHHHhcCEEEeCC----CCh
Confidence 9999999999997 79999999999987543222111 1 1 2357888999999999764 467
Q ss_pred cccCHHHHhcCCCCcEEEEcCCCcc-cCHHHH
Q 019387 252 HLINKERLATMKKEAILVNCSRGPV-IDEVAL 282 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL 282 (342)
++++.+.|+.||+|++++|+||+.. ++.+.+
T Consensus 332 ~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l 363 (488)
T 3ond_A 332 DIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 363 (488)
T ss_dssp CSBCHHHHTTSCTTEEEEESSSTTTTBTHHHH
T ss_pred hhhhHHHHHhcCCCeEEEEcCCCCcccchHHH
Confidence 8999999999999999999999842 344433
No 61
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.16 E-value=4.1e-11 Score=111.18 Aligned_cols=112 Identities=16% Similarity=0.073 Sum_probs=89.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||..+|+.| ...|.+|++||++++.. +.+.+ . +.....++++++++||+|++|+|
T Consensus 2 ~~i~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~-~~~~~--------~-----g~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNL-VKAGCSVTIWNRSPEKA-EELAA--------L-----GAERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGG-HHHHH--------T-----TCEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCeEEEEcCCHHHH-HHHHH--------C-----CCeecCCHHHHHhcCCEEEEEcC
Confidence 5899999999999999998 57799999999987643 22111 1 22345799999999999999999
Q ss_pred CCcccccccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 246 l~~~t~~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
.+.+.+.++. +..+..+++|.++||++.....+.+.+.+.+++..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 7667776662 5566789999999999999988889999998876554
No 62
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.16 E-value=3.3e-11 Score=112.56 Aligned_cols=112 Identities=21% Similarity=0.246 Sum_probs=89.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.++|||||+|.||..+|+.| ...|.+|.+||++++.. +.+. .. +.....+++++++ ||+|++|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~-~~~~--------~~-----g~~~~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRM-TEWPGGVTVYDIRIEAM-TPLA--------EA-----GATLADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHH-TTSTTCEEEECSSTTTS-HHHH--------HT-----TCEECSSHHHHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHHH--------HC-----CCEEcCCHHHHHh-CCEEEEEC
Confidence 35899999999999999998 57799999999987642 1111 11 1234578999999 99999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~ 293 (342)
|.+..++.++ +..+..+++|.++||+++....+.+.+.+.+.+..+..
T Consensus 79 p~~~~~~~v~-~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~ 126 (296)
T 3qha_A 79 LDDAQVREVV-GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHI 126 (296)
T ss_dssp SSHHHHHHHH-HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEE
T ss_pred CChHHHHHHH-HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEE
Confidence 9766777777 67778899999999999999988899999998755543
No 63
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.12 E-value=4.2e-11 Score=111.07 Aligned_cols=112 Identities=16% Similarity=0.091 Sum_probs=88.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||..+|+.|+ ..|.+|++||++++.. +.+.+ . +.....++++++++||+|++|+|
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~-~~~~~--------~-----g~~~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLV-RAGFDVTVWNRNPAKC-APLVA--------L-----GARQASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHH-HHTCCEEEECSSGGGG-HHHHH--------H-----TCEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEccCHHHHHHHHHHH-HCCCeEEEEcCCHHHH-HHHHH--------C-----CCeecCCHHHHHHcCCEEEEEcC
Confidence 47999999999999999984 6699999999987643 21111 1 12245789999999999999999
Q ss_pred CCcccccccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 246 l~~~t~~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
.++.++.++. +..+..+++|.++||++++...+.+.+.+.+.+..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 7667766662 4566789999999999999988888999988775444
No 64
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.12 E-value=3e-10 Score=104.18 Aligned_cols=198 Identities=17% Similarity=0.124 Sum_probs=124.5
Q ss_pred HHHHHhCCCeEEEecCCCCCCCHHHHHHHhCC---CceEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhHHH
Q 019387 30 INLLIEQDCRVEICTQKKTILSVEDIIALIGD---KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (342)
Q Consensus 30 ~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~---~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~G~d~id~~~~~ 106 (342)
-..+++.|.+..+... ..+++++.+.+.. ...++.+ +.++.+++++.++.+ .-++....|+|.++.
T Consensus 21 ~~~~~~~g~~~~y~~~---~~~~~~l~~~i~~l~~~~~G~~v--t~P~k~~i~~~~~~l--~~~a~~~gavn~i~~---- 89 (263)
T 2d5c_A 21 AFALESLGLEGSYEAW---DTPLEALPGRLKEVRRAFRGVNL--TLPLKEAALAHLDWV--SPEAQRIGAVNTVLQ---- 89 (263)
T ss_dssp HHHHHHTTCCEEEEEE---ECCGGGHHHHHHHHHHHCSEEEE--CTTCTTGGGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHHcCCCCEEEEE---eCCHHHHHHHHHhccccCceEEE--cccCHHHHHHHHHHH--hHHHHHhCCCCcEEc----
Confidence 3456777777655432 2345566554432 1233333 345667777777665 555566678888864
Q ss_pred hCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHh
Q 019387 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~ 186 (342)
+.|-. .++|+.. .+++.++.| . +.++.| +++|||.|.||+.+|+.| .
T Consensus 90 ~~g~~----~g~ntd~-----~g~~~~l~~----------~------------~~~l~~-~v~iiG~G~~g~~~a~~l-~ 136 (263)
T 2d5c_A 90 VEGRL----FGFNTDA-----PGFLEALKA----------G------------GIPLKG-PALVLGAGGAGRAVAFAL-R 136 (263)
T ss_dssp ETTEE----EEECCHH-----HHHHHHHHH----------T------------TCCCCS-CEEEECCSHHHHHHHHHH-H
T ss_pred cCCeE----EEeCCCH-----HHHHHHHHH----------h------------CCCCCC-eEEEECCcHHHHHHHHHH-H
Confidence 23422 2444443 244444432 1 235789 999999999999999997 5
Q ss_pred cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCc--ccccccCHHHHhcCCC
Q 019387 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK--TTYHLINKERLATMKK 264 (342)
Q Consensus 187 afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~--~t~~li~~~~l~~mk~ 264 (342)
..|++|.++|++++. .+.+.+.+ +. . ..+++++ +++|+|++|+|... ++...+. ...+++
T Consensus 137 ~~g~~v~v~~r~~~~-~~~l~~~~-------~~-----~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~ 198 (263)
T 2d5c_A 137 EAGLEVWVWNRTPQR-ALALAEEF-------GL-----R-AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPE 198 (263)
T ss_dssp HTTCCEEEECSSHHH-HHHHHHHH-------TC-----E-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCS
T ss_pred HCCCEEEEEECCHHH-HHHHHHHh-------cc-----c-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCC
Confidence 789999999998753 22222221 11 0 2467778 99999999999763 3334554 467899
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 265 EAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 265 ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
|++++|++.+.. +. .|.+++++..+
T Consensus 199 g~~viD~~~~p~-~t-~l~~~a~~~g~ 223 (263)
T 2d5c_A 199 EGAAVDLVYRPL-WT-RFLREAKAKGL 223 (263)
T ss_dssp SSEEEESCCSSS-SC-HHHHHHHHTTC
T ss_pred CCEEEEeecCCc-cc-HHHHHHHHCcC
Confidence 999999998754 33 47777766443
No 65
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.10 E-value=5.9e-11 Score=111.05 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=88.0
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccc-cCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-ASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ll~~aDiV~l~ 243 (342)
.++|||||+|.||..+|+.| ...|.+|.+||++++.. +... ..+ ... ..++++++++||+|++|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~-~~~~--------~~g-----~~~~~~~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSC-LRAGLSTWGADLNPQAC-ANLL--------AEG-----ACGAAASAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHH--------HTT-----CSEEESSSTTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHH-HHHH--------HcC-----CccccCCHHHHHhcCCEEEEE
Confidence 46899999999999999998 46799999999987542 2211 111 112 46888899999999999
Q ss_pred CCCCcccccccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 244 PVLDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 244 ~pl~~~t~~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|.+...+.++. +..+..+++|.++||+++......+.+.+.+.+..+.
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 997666666653 4556789999999999999988888899988875443
No 66
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.09 E-value=1.5e-10 Score=107.89 Aligned_cols=111 Identities=18% Similarity=0.222 Sum_probs=88.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||..+|+.| ...|.+|++||++++.. +.+.+ . +.....++++++++||+|++|+|
T Consensus 4 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~d~~~~~~-~~~~~--------~-----g~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAV-DGLVA--------A-----GASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHH-HHHHH--------T-----TCEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HhCCCeEEEEcCCHHHH-HHHHH--------C-----CCeEcCCHHHHHhCCCeEEEECC
Confidence 6899999999999999998 57799999999987542 22111 1 22345789999999999999999
Q ss_pred CCcccccccCH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 246 l~~~t~~li~~--~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
.+.+++.++.. +.+..+++|.++||++.+.....+.+.+.+.+..+
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 76666666642 56678999999999999998888889999876544
No 67
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.09 E-value=2.1e-10 Score=114.09 Aligned_cols=128 Identities=16% Similarity=0.203 Sum_probs=97.7
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh---cCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~aDiV~ 241 (342)
.++|||||+|.||..+|+.| ...|.+|.+||++++.. +.+.+ .+..........+++++++ ++|+|+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L-~~~G~~V~v~dr~~~~~-~~l~~--------~g~~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNM-NDHGFVVCAFNRTVSKV-DDFLA--------NEAKGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSTHHH-HHHHH--------TTTTTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCEEEEEChhHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHh--------cccCCCceeccCCHHHHHhhccCCCEEE
Confidence 35899999999999999998 47799999999988643 22211 1111112223468899887 499999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE 303 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP 303 (342)
+++|..+.++.++ ++.+..|++|.++||++++...+...+.+.|++..+.....-|.-.++
T Consensus 74 l~Vp~~~~v~~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~ 134 (484)
T 4gwg_A 74 LLVKAGQAVDDFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEE 134 (484)
T ss_dssp ECSCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHH
T ss_pred EecCChHHHHHHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHH
Confidence 9999877777777 567788999999999999999999999999988777655555655444
No 68
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.09 E-value=2.3e-10 Score=108.01 Aligned_cols=123 Identities=16% Similarity=0.055 Sum_probs=89.2
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCch--hHHHHHHhhhhhhhhccCCCCccccccC-CHHHHhhcCCEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVLREADVI 240 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ll~~aDiV 240 (342)
.++|||||+|.||..+|+.| ...| .+|++||++++ .+.+...+.+ ...+ . .. ++++++++||+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L-~~~G~~~V~~~dr~~~~~~~~~~~~~~~----~~~g-----~--~~~s~~e~~~~aDvV 91 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGL-GGRNAARLAAYDLRFNDPAASGALRARA----AELG-----V--EPLDDVAGIACADVV 91 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECGGGGCTTTHHHHHHHH----HHTT-----C--EEESSGGGGGGCSEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHcCCCeEEEEeCCCccccchHHHHHHH----HHCC-----C--CCCCHHHHHhcCCEE
Confidence 36899999999999999998 5789 99999999863 1111111110 1111 1 35 788899999999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCC
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEV 301 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~ 301 (342)
++|+|.......+ .+.+..+++|.++||++.......+.+.+.+++..+....--|+-.
T Consensus 92 i~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~ 150 (317)
T 4ezb_A 92 LSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR 150 (317)
T ss_dssp EECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC
T ss_pred EEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC
Confidence 9999976555443 6677889999999999999988899999999875554322234543
No 69
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.07 E-value=1.5e-10 Score=105.20 Aligned_cols=108 Identities=10% Similarity=0.147 Sum_probs=65.5
Q ss_pred CCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhH-------------HHHHHhhhhhhhh
Q 019387 149 LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR-------------LEKFVTAYGQFLK 215 (342)
Q Consensus 149 ~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~-------------~~~~~~~~~~~~~ 215 (342)
.|..|.+......++.+++|||||+|+||..+|+.| ...|.+|++||++++.. .+.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L-~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (245)
T 3dtt_A 3 SDKIHHHHHHENLYFQGMKIAVLGTGTVGRTMAGAL-ADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP------- 74 (245)
T ss_dssp ----------------CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-------
T ss_pred cccccccccccccccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-------
Confidence 455555444566789999999999999999999998 47799999999987641 111110
Q ss_pred ccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHH-HhcCCCCcEEEEcC
Q 019387 216 ANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCS 272 (342)
Q Consensus 216 ~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~-l~~mk~ga~lINva 272 (342)
..+ .....++++++++||+|++|+|..... ..+. +. ...+ +|.++|+++
T Consensus 75 ~~~-----~~~~~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 75 EHP-----HVHLAAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp GST-----TCEEEEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECC
T ss_pred hcC-----ceeccCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECC
Confidence 001 113468899999999999999965433 2222 11 2223 799999999
No 70
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.00 E-value=6.8e-10 Score=102.62 Aligned_cols=216 Identities=15% Similarity=0.139 Sum_probs=124.2
Q ss_pred eCCCCceEEEEeCCCCc----hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhCC----CceEEEecCCCCccHHHHHH
Q 019387 10 WNPNGKYRVVSTKPMPG----TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGD----KCDGVIGQLTEDWGETLFAA 81 (342)
Q Consensus 10 ~~~~~~~~vl~~~~~~~----~~~~~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~~----~~d~vi~~~~~~~~~e~l~~ 81 (342)
.++.++.--|+=+|+.. ...-..+++.|.+..+.... .+++++.+.+.. +.+++.+. .+..++.+..
T Consensus 8 ~~~~t~~~~liG~pi~hs~sp~~h~~~~~~~g~~~~y~~~~---~~~~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~ 82 (275)
T 2hk9_A 8 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFE---INPEELKKAFEGFKALKVKGINVT--VPFKEEIIPL 82 (275)
T ss_dssp CCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEE---CCGGGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGG
T ss_pred ccCCceEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEE---CCHHHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHH
Confidence 45555443344344332 22224556667666543322 345565554421 35666654 3455666655
Q ss_pred hhccCCceEEEccccCCccChhHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCccccc
Q 019387 82 LSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGN 161 (342)
Q Consensus 82 l~~l~~k~i~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~ 161 (342)
+..+ .-.+....++|.++. +.|-. .|+|+... +.+.++.+ . +.
T Consensus 83 ld~l--~~~A~~~gavnti~~----~~g~~----~g~nTd~~-----G~~~~l~~----------~------------~~ 125 (275)
T 2hk9_A 83 LDYV--EDTAKEIGAVNTVKF----ENGKA----YGYNTDWI-----GFLKSLKS----------L------------IP 125 (275)
T ss_dssp CSEE--CHHHHHHTCCCEEEE----ETTEE----EEECCHHH-----HHHHHHHH----------H------------CT
T ss_pred HHHh--hHHHHHhCCcceEEe----eCCEE----EeecCCHH-----HHHHHHHH----------h------------CC
Confidence 5543 333344455666543 23422 23444332 44444332 1 23
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
++.|++++|||.|.+|+++|+.| ...|++|.++|++++.. +.+.+.+ +.....+++++++++|+|+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L-~~~g~~V~v~~r~~~~~-~~l~~~~------------g~~~~~~~~~~~~~aDiVi 191 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYAL-VKEGAKVFLWNRTKEKA-IKLAQKF------------PLEVVNSPEEVIDKVQVIV 191 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSHHHH-HHHTTTS------------CEEECSCGGGTGGGCSEEE
T ss_pred CcCCCEEEEECchHHHHHHHHHH-HHcCCEEEEEECCHHHH-HHHHHHc------------CCeeehhHHhhhcCCCEEE
Confidence 57789999999999999999997 56788999999987532 2211110 1122337788889999999
Q ss_pred EcCCCCcc--cccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 242 LHPVLDKT--TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 242 l~~pl~~~--t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+|+|.... +...++ +..+++|.++++++. .... +.++.++
T Consensus 192 ~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~---~~t~-ll~~a~~ 233 (275)
T 2hk9_A 192 NTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY---KETK-LLKKAKE 233 (275)
T ss_dssp ECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS---SCCH-HHHHHHH
T ss_pred EeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC---ChHH-HHHHHHH
Confidence 99997642 223454 456899999999988 3333 4444444
No 71
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.00 E-value=1.9e-09 Score=99.92 Aligned_cols=142 Identities=13% Similarity=0.070 Sum_probs=96.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhh----hhhhhcc-CCCC-------ccccccCCHHHH
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY----GQFLKAN-GEQP-------VTWKRASSMDEV 233 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~----~~~~~~~-~~~~-------~~~~~~~~l~~l 233 (342)
++|+|||.|.||..+|+.+ ...|.+|++||++++.. +...+.. ..+.... +... .......+++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~l-a~~G~~V~l~d~~~~~~-~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQT-AFHGFAVTAYDINTDAL-DAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHH-HHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEeCCHHHH-HHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 6899999999999999998 47799999999987642 2211110 0000000 0000 011234688899
Q ss_pred hhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--CCcccccc
Q 019387 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--LGFSSFKH 311 (342)
Q Consensus 234 l~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--~~~~~tPh 311 (342)
+++||+|+.++|.+.+.+..+-++....+++++++++.+.+ +..+++.+++.. .-..+++..|.+-+ +.+.++||
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~-~~~~ig~h~~~p~~~~~lvevv~~ 159 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGR-GDKFLALHFANHVWVNNTAEVMGT 159 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSC-GGGEEEEEECSSTTTSCEEEEEEC
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCC-CcceEEEccCCCcccCceEEEEeC
Confidence 99999999999987777777777788889999999965444 456788888754 34567777775433 55666776
Q ss_pred c
Q 019387 312 I 312 (342)
Q Consensus 312 i 312 (342)
-
T Consensus 160 ~ 160 (283)
T 4e12_A 160 T 160 (283)
T ss_dssp T
T ss_pred C
Confidence 3
No 72
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.95 E-value=6.9e-10 Score=103.05 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=85.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
.+|+|||+|.||+.+|+.| ...|.+|.+||++++.. +.+. ..+ .....+++++++++|+|++|+|
T Consensus 6 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~-~~~~--------~~g-----~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNL-LKAGYSLVVSDRNPEAI-ADVI--------AAG-----AETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHH-HHHH--------HTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHH--------HCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 4899999999999999998 46799999999987542 2211 111 2234688899999999999999
Q ss_pred CCcccccccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 246 l~~~t~~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
.+.+.+.++. ++....+++|.++||++.|...+.+.|.+.+.+..+
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 7666666663 345577899999999999987778889998876433
No 73
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.95 E-value=1.4e-09 Score=101.03 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=85.0
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||+.+|+.| ...|.+|.+||++++.. +.+. .. +.....++++++.++|+|++|+|
T Consensus 5 ~~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~-~~~~--------~~-----g~~~~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINL-LKEGVTVYAFDLMEANV-AAVV--------AQ-----GAQACENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CEEEEECCCTTHHHHHHHH-HHTTCEEEEECSSHHHH-HHHH--------TT-----TCEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHHH--------HC-----CCeecCCHHHHHhCCCEEEEECC
Confidence 5899999999999999998 46799999999987542 2211 11 12234688999999999999999
Q ss_pred CCcccccccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 l~~~t~~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
.+.+++.++. ++....+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 70 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7666777774 3556778999999999998866778888888764
No 74
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.94 E-value=2.4e-09 Score=98.59 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=79.6
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~aDiV~l 242 (342)
++|||||+|+||..+|+.| ...|. +|++||++++.. +... ..+... ....+++++++ +||+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l-~~~g~~~~V~~~d~~~~~~-~~~~--------~~g~~~---~~~~~~~~~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESI-SKAV--------DLGIID---EGTTSIAKVEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHH-HHHH--------HTTSCS---EEESCGGGGGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHH-HhcCCCcEEEEEeCCHHHH-HHHH--------HCCCcc---cccCCHHHHhcCCCCEEEE
Confidence 5899999999999999997 56777 999999987543 2111 112111 11346778888 9999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
|+|.. .+..++. +....+++++++++++++.....+.+.+.+.++
T Consensus 69 avp~~-~~~~v~~-~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~ 113 (281)
T 2g5c_A 69 SSPVR-TFREIAK-KLSYILSEDATVTDQGSVKGKLVYDLENILGKR 113 (281)
T ss_dssp CSCHH-HHHHHHH-HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG
T ss_pred cCCHH-HHHHHHH-HHHhhCCCCcEEEECCCCcHHHHHHHHHhcccc
Confidence 99953 4555554 355678999999999988866667788888754
No 75
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.92 E-value=3e-09 Score=105.85 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=90.3
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc---CCE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADV 239 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---aDi 239 (342)
...++|||||+|.||+.+|+.|+ ..|.+|.+||++++.. +.+.+.. . ..+.....+++++++. +|+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~~r~~~~~-~~l~~~~-------~--~~gi~~~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIE-SRGYTVSIFNRSREKT-EEVIAEN-------P--GKKLVPYYTVKEFVESLETPRR 81 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHH-HHHHHHS-------T--TSCEEECSSHHHHHHTBCSSCE
T ss_pred cCCCeEEEEccHHHHHHHHHHHH-hCCCeEEEEeCCHHHH-HHHHhhC-------C--CCCeEEeCCHHHHHhCCCCCCE
Confidence 45678999999999999999984 6799999999987543 2222111 0 0123345689998887 999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~ 293 (342)
|++++|.+..++.++ ++....+++|.++||++.|...+...+.+.|.+..+..
T Consensus 82 Vil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~ 134 (480)
T 2zyd_A 82 ILLMVKAGAGTDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNF 134 (480)
T ss_dssp EEECSCSSSHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCHHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCe
Confidence 999999877788888 45667889999999999998888888988887754443
No 76
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.92 E-value=6.6e-09 Score=99.71 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=81.5
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-cCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~aDiV 240 (342)
+|.||+|+|+|+|+||+.+|+.| ..+|++|+++|+.+.. .+.+.+.+ + . ...+.++++. +||++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L-~~~GakVvv~D~~~~~-l~~~a~~~-------g-----a-~~v~~~~ll~~~~DIv 234 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKL-NTEGAKLVVTDVNKAA-VSAAVAEE-------G-----A-DAVAPNAIYGVTCDIF 234 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH-HHHHHHHH-------C-----C-EECCGGGTTTCCCSEE
T ss_pred CCCcCEEEEECchHHHHHHHHHH-HHCCCEEEEEcCCHHH-HHHHHHHc-------C-----C-EEEChHHHhccCCcEe
Confidence 68999999999999999999997 7999999999987643 23222222 1 1 1124556665 89999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
+.|. +.++|+.+.++.|+ ..++++.+++++.+++ ..+.|+++.+
T Consensus 235 ip~a-----~~~~I~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 235 APCA-----LGAVLNDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp EECS-----CSCCBSTTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred eccc-----hHHHhCHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 9874 56799988889895 5689999999998866 5566766543
No 77
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.90 E-value=1.7e-09 Score=100.21 Aligned_cols=107 Identities=22% Similarity=0.278 Sum_probs=80.8
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl 246 (342)
+|||||+|.||+.+|+.| ...|.+|.+||++++.. +.+. .. +.....+++++++++|+|++|+|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~-~~~~--------~~-----g~~~~~~~~~~~~~~Dvvi~~vp~ 66 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNL-MKHGYPLIIYDVFPDAC-KEFQ--------DA-----GEQVVSSPADVAEKADRIITMLPT 66 (296)
T ss_dssp CEEEECCSTTHHHHHHHH-HHTTCCEEEECSSTHHH-HHHH--------TT-----TCEECSSHHHHHHHCSEEEECCSS
T ss_pred eEEEEeccHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH--------Hc-----CCeecCCHHHHHhcCCEEEEeCCC
Confidence 699999999999999998 46799999999987542 2211 11 122346889999999999999997
Q ss_pred CcccccccCH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 247 DKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 247 ~~~t~~li~~--~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+.+++.++.. ..+..+++|.++|+++....-+.+.+.+.+.+
T Consensus 67 ~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 67 SINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp HHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 6677766643 24567899999999887776666677777765
No 78
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.90 E-value=4.4e-09 Score=99.08 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=79.6
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHH-HhhcCCE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VLREADV 239 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-ll~~aDi 239 (342)
+..++|||||+|.||+.+|+.| +..|. +|++||++++..... . ..+... ....++++ ++++||+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l-~~~G~~~~V~~~dr~~~~~~~a-~--------~~G~~~---~~~~~~~~~~~~~aDv 97 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISKA-V--------DLGIID---EGTTSIAKVEDFSPDF 97 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHHH-H--------HTTSCS---EEESCTTGGGGGCCSE
T ss_pred cCCCEEEEEeeCHHHHHHHHHH-HhCCCCCEEEEEECCHHHHHHH-H--------HCCCcc---hhcCCHHHHhhccCCE
Confidence 4458999999999999999998 57788 999999987543211 1 112111 12357788 8999999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
|++|+|.. .+..++ ++....+++|+++++++.......+++.+.+..
T Consensus 98 Vilavp~~-~~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~ 144 (314)
T 3ggo_A 98 VMLSSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK 144 (314)
T ss_dssp EEECSCGG-GHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred EEEeCCHH-HHHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC
Confidence 99999954 344444 456677999999999987665445666666644
No 79
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.89 E-value=1.5e-09 Score=100.47 Aligned_cols=108 Identities=16% Similarity=0.140 Sum_probs=82.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
.+|||||+|.||+.+|+.| ...|.+|.+|| +++.. +.+. ..+ .....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~-~~~~~-~~~~--------~~g-----~~~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINL-ARAGHQLHVTT-IGPVA-DELL--------SLG-----AVNVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp CEEEECCCSTTHHHHHHHH-HHTTCEEEECC-SSCCC-HHHH--------TTT-----CBCCSSHHHHHHTCSEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHH-HhCCCEEEEEc-CHHHH-HHHH--------HcC-----CcccCCHHHHHhcCCEEEEECC
Confidence 4899999999999999998 46799999999 66432 1111 111 2234688999999999999999
Q ss_pred CCcccccccCH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 l~~~t~~li~~--~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
...+++.++.. .....+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 68 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 68 DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp SHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 76656666642 445678999999999999877888899988763
No 80
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=98.89 E-value=3.7e-09 Score=98.69 Aligned_cols=91 Identities=15% Similarity=0.238 Sum_probs=70.6
Q ss_pred CCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.++||||| +|.||..+|+.| ...|.+|.+||+++. .+.++++++||+|++|
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l-~~~G~~V~~~~~~~~---------------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYL-RASGYPISILDREDW---------------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHH-HTTTCCEEEECTTCG---------------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHH-HhCCCeEEEEECCcc---------------------------cCHHHHhcCCCEEEEe
Confidence 57899999 999999999998 578999999997653 2567788999999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEH 285 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~a 285 (342)
+|.. .+..++. +....+++++++++++.......+++.+.
T Consensus 73 vp~~-~~~~vl~-~l~~~l~~~~iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 73 VPIN-LTLETIE-RLKPYLTENMLLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp SCGG-GHHHHHH-HHGGGCCTTSEEEECCSCCHHHHHHHHHH
T ss_pred CCHH-HHHHHHH-HHHhhcCCCcEEEECCCCCcHHHHHHHHh
Confidence 9954 4666664 34567899999999987664334444443
No 81
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.87 E-value=3.6e-09 Score=99.15 Aligned_cols=111 Identities=14% Similarity=0.165 Sum_probs=83.6
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||+.+|+.| ...|.+|.+||++++.. +.+.+ .+ .....++++++.++|+|++|+|
T Consensus 31 ~~I~iIG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~-~~~~~--------~g-----~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNL-LKMGHTVTVWNRTAEKC-DLFIQ--------EG-----ARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSSGGGG-HHHHH--------TT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHH--------cC-----CEEcCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999998 46789999999987542 22111 11 1234578889999999999999
Q ss_pred CCcccccccCH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 246 l~~~t~~li~~--~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
....++.++.. ..+..+++|.++|+++.+.....+.+.+.+.....
T Consensus 96 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 96 DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 66666665543 24567899999999999877777888888865333
No 82
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.85 E-value=3e-09 Score=98.02 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=80.7
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
++|||||+|.||+.+|+.|+ . |.+|.+||++++.. +...+ .+ ..... +++++.++|+|++|+|
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~~~~~-~~~~~--------~g-----~~~~~-~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRTFEKA-LRHQE--------EF-----GSEAV-PLERVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHH-T-TSCEEEECSSTHHH-HHHHH--------HH-----CCEEC-CGGGGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHh-C-CCeEEEEeCCHHHH-HHHHH--------CC-----CcccC-HHHHHhCCCEEEEeCC
Confidence 47999999999999999984 6 99999999987542 22111 01 11123 6677889999999999
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
....+..++ ++....+++|.++|+++.+...+.+.|.+.+.+.
T Consensus 65 ~~~~~~~v~-~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 65 TTREVYEVA-EALYPYLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp SHHHHHHHH-HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 755566655 4555778999999999998888888899988764
No 83
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.84 E-value=7.5e-09 Score=103.38 Aligned_cols=117 Identities=15% Similarity=0.232 Sum_probs=89.1
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc---CCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---aDiV~ 241 (342)
..+|||||+|.||+.+|+.|+ ..|.+|.+||++++.. +.+.+. ... ..+.....+++++++. +|+|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~------~~~--~~gi~~~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAA-DHGFTVCAYNRTQSKV-DHFLAN------EAK--GKSIIGATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSHHH-HHHHHT------TTT--TSSEECCSSHHHHHHTSCSSCEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHcc------ccc--CCCeEEeCCHHHHHhcCCCCCEEE
Confidence 458999999999999999985 6689999999987643 222110 000 0123345689998887 99999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+++|....++.++ ++....+++|.++|+++.+...+...+.+.+.+..+.
T Consensus 80 l~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 80 LLVKAGAPVDALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp ECCCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEcCChHHHHHHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 9999877778777 4566789999999999999888888898888764444
No 84
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.82 E-value=1e-07 Score=91.38 Aligned_cols=228 Identities=15% Similarity=0.183 Sum_probs=130.7
Q ss_pred CCCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHHHH----------hCCCceEEEecCCCCccHHHHHHhhccCCceE
Q 019387 23 PMPGTRWINLLIEQDCRVEICTQKK--TILSVEDIIAL----------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (342)
Q Consensus 23 ~~~~~~~~~~l~~~~~~v~~~~~~~--~~~~~~e~~~~----------~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i 90 (342)
.+.|+. .+.|.+.|++|.+..... ...+.++..+. +. ++|+|+.-. .+...+. ..+ +.|...+
T Consensus 17 ~~~P~~-v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~-~ad~i~~vk-sP~~~~~-~~~-~~g~~~~ 91 (361)
T 1pjc_A 17 GLSPSS-VRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAW-SREMVVKVK-EPLPAEY-DLM-QKDQLLF 91 (361)
T ss_dssp SCCHHH-HHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHH-TSSEEECSS-CCCGGGG-GGC-CTTCEEE
T ss_pred CcCHHH-HHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHh-cCCeEEEEC-CCCHHHH-Hhh-cCCCEEE
Confidence 344443 688888899998754332 34555555421 11 478877442 2332222 111 1232344
Q ss_pred EEccccCCccChhHHHhCCeeEec---CCCCC-----chhHHHHHH--HHHHHHHhchHHHHHHHHcCCCCCCCCCcccc
Q 019387 91 SNMAVGYNNVDVNAANKYGIAVGN---TPGVL-----TETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVG 160 (342)
Q Consensus 91 ~~~~~G~d~id~~~~~~~gI~V~n---~~~~~-----~~~vAE~~l--~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~ 160 (342)
.......+.-.++.+.+.|+...| .|... -.++++.+= +.++.... +... ..|. +..-. ..
T Consensus 92 ~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~n-t~~~----~~g~--G~~l~-~l- 162 (361)
T 1pjc_A 92 TYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARF-LERQ----QGGR--GVLLG-GV- 162 (361)
T ss_dssp ECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHH-TSGG----GTSC--CCCTT-CB-
T ss_pred EEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHH-Hhhc----cCCC--ceecc-CC-
Confidence 444444454446777888888765 34321 234444443 44444422 2110 1111 00000 01
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
..+.+++|.|+|.|.+|+.+++.+ +++|++|+++|++++.. +.....+... .........++.+.+.++|+|
T Consensus 163 ~~l~~~~VlViGaGgvG~~aa~~a-~~~Ga~V~v~dr~~~r~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~DvV 234 (361)
T 1pjc_A 163 PGVKPGKVVILGGGVVGTEAAKMA-VGLGAQVQIFDINVERL-SYLETLFGSR------VELLYSNSAEIETAVAEADLL 234 (361)
T ss_dssp TTBCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHHGGG------SEEEECCHHHHHHHHHTCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHHhhCce------eEeeeCCHHHHHHHHcCCCEE
Confidence 247789999999999999999996 79999999999987542 2211111000 000000113566778899999
Q ss_pred EEcCCCCc-ccccccCHHHHhcCCCCcEEEEcC
Q 019387 241 SLHPVLDK-TTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 241 ~l~~pl~~-~t~~li~~~~l~~mk~ga~lINva 272 (342)
+.|++... .+..++.++.++.|++|..++|++
T Consensus 235 I~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred EECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99987533 245677889999999999999997
No 85
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.81 E-value=6.9e-09 Score=103.12 Aligned_cols=123 Identities=16% Similarity=0.157 Sum_probs=90.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc---CCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---aDiV~l 242 (342)
++|||||+|.||+.+|+.|+ ..|.+|.+||++++.. +.+.+.+ + ..+.....++++++.. +|+|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~-~~G~~V~v~dr~~~~~-~~l~~~~-------~--~~gi~~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE-SRGYTVAIYNRTTSKT-EEVFKEH-------Q--DKNLVFTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHHT-------T--TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHHH-hCCCEEEEEcCCHHHH-HHHHHhC-------c--CCCeEEeCCHHHHHhhccCCCEEEE
Confidence 57999999999999999984 6789999999987542 2222111 0 0122345689998876 999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
|+|.+..+..++ ++....+++|.++|+++.|...+...+.+.+.+..+.....-|+.
T Consensus 75 avp~~~~v~~vl-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (474)
T 2iz1_A 75 MVQAGAATDATI-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSG 131 (474)
T ss_dssp CCCTTHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECS
T ss_pred EccCchHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCC
Confidence 999877777777 355677899999999999987788888888876545444444443
No 86
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.81 E-value=4e-09 Score=100.31 Aligned_cols=96 Identities=23% Similarity=0.250 Sum_probs=71.8
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
..+.+++|||||+|.||+++|+.| +..|++|++++++++...+... ..+ +... ++++++++||+|
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L-~~~G~~V~~~~~~~~~~~~~a~--------~~G-----~~~~-~~~e~~~~aDvV 76 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNL-KDSGVDVTVGLRSGSATVAKAE--------AHG-----LKVA-DVKTAVAAADVV 76 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHH-HHTTCCEEEECCTTCHHHHHHH--------HTT-----CEEE-CHHHHHHTCSEE
T ss_pred chhcCCEEEEECchHHHHHHHHHH-HHCcCEEEEEECChHHHHHHHH--------HCC-----CEEc-cHHHHHhcCCEE
Confidence 467899999999999999999997 6789999999998654222111 111 1122 788999999999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
++|+|.. ....++.++....+++|+++++++
T Consensus 77 ilavp~~-~~~~v~~~~i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 77 MILTPDE-FQGRLYKEEIEPNLKKGATLAFAH 107 (338)
T ss_dssp EECSCHH-HHHHHHHHHTGGGCCTTCEEEESC
T ss_pred EEeCCcH-HHHHHHHHHHHhhCCCCCEEEEcC
Confidence 9999954 335555545556799999999874
No 87
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.80 E-value=2.4e-08 Score=82.78 Aligned_cols=104 Identities=13% Similarity=0.215 Sum_probs=75.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
|++|+|+|.|.||+.+++.| ...|++|.++|++++.. +.+.+.++ .......++++++.++|+|+.|+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l-~~~g~~v~v~~r~~~~~-~~~a~~~~----------~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYF-SYPQYKVTVAGRNIDHV-RAFAEKYE----------YEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGC-CTTTCEEEEEESCHHHH-HHHHHHHT----------CEEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEcCCHHHH-HHHHHHhC----------CceEeecCHHHHhcCCCEEEEeC
Confidence 88999999999999999997 67899999999987542 22222221 11123468899999999999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCcc-------cCHHHHHHHH
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-------IDEVALVEHL 286 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~-------vd~~aL~~aL 286 (342)
|.+ ..++.. +.+++|.+++|++...- ++.++|.+.+
T Consensus 89 ~~~---~~~~~~---~~l~~g~~vid~~~p~~~~~~~~~~~~d~l~~~~ 131 (144)
T 3oj0_A 89 SSK---TPIVEE---RSLMPGKLFIDLGNPPNIERGNNVITLDEIYEIS 131 (144)
T ss_dssp CCS---SCSBCG---GGCCTTCEEEECCSSCSBCCSTTSEEHHHHHHHH
T ss_pred CCC---CcEeeH---HHcCCCCEEEEccCCccCCCCCEEEeHHHHHHHH
Confidence 864 345554 45788999999987543 3445555544
No 88
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.25 E-value=7.5e-10 Score=97.76 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=71.7
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
+.+++|||||+|+||+.+|+.| ...|.+|.+||++++ . +.+. .. +... .+++++++++|+|++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~-~-~~~~--------~~-----g~~~-~~~~~~~~~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKM-LQCGYSVVFGSRNPQ-V-SSLL--------PR-----GAEV-LCYSEAASRSDVIVL 79 (201)
Confidence 6788999999999999999997 578999999998764 1 1110 00 1112 367788899999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCccc
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~v 277 (342)
++|.. .++.++ .+..+++|+++||+++|-..
T Consensus 80 av~~~-~~~~v~---~l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 80 AVHRE-HYDFLA---ELADSLKGRVLIDVSNNQKM 110 (201)
Confidence 99964 677776 25567789999999999753
No 89
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.77 E-value=1.3e-08 Score=101.25 Aligned_cols=124 Identities=16% Similarity=0.231 Sum_probs=89.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh---cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~aDiV~l 242 (342)
.+|||||+|.||+.+|..|+ ..|.+|.+||++++.. +.+.+. ...+ .+.....++++++. ++|+|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~-----~~~g---~gi~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMN-DHGFVVCAFNRTVSKV-DDFLAN-----EAKG---TKVLGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSTHHH-HHHHHT-----TTTT---SSCEECSSHHHHHHHBCSSCEEEE
T ss_pred CeEEEEChHHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHhc-----cccC---CCeEEeCCHHHHHhhccCCCEEEE
Confidence 47999999999999999984 6789999999987542 222110 0000 12233568888875 8999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
|+|....++.++. +....+++|.++|+++.|...+...+.+.+.+..+.....-|+.
T Consensus 73 aVp~~~~v~~vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g 129 (482)
T 2pgd_A 73 LVKAGQAVDNFIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSG 129 (482)
T ss_dssp CSCTTHHHHHHHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred eCCChHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCC
Confidence 9997767777774 55677899999999999988777888888876545444334443
No 90
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.75 E-value=2.3e-08 Score=99.49 Aligned_cols=125 Identities=17% Similarity=0.203 Sum_probs=89.7
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc---CCEEEEc
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISLH 243 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---aDiV~l~ 243 (342)
+|||||+|.||+.+|+.|+ ..|.+|.+||++++.. +.+.+.++. . ..+.......++++++.. +|+|++|
T Consensus 3 kIgVIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~~g~--~---~~~~~i~~~~~~~e~v~~l~~aDvVila 75 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIA-EKGFKVAVFNRTYSKS-EEFMKANAS--A---PFAGNLKAFETMEAFAASLKKPRKALIL 75 (478)
T ss_dssp SEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHHTTT--S---TTGGGEEECSCHHHHHHHBCSSCEEEEC
T ss_pred EEEEEChHHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHHhcCC--C---CCCCCeEEECCHHHHHhcccCCCEEEEe
Confidence 6999999999999999984 6789999999987542 222211110 0 001112345688888875 9999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF 299 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~ 299 (342)
+|....++.++ ++....+++|.++|+++.|...+.+.+.+.+.+..+.....-|.
T Consensus 76 Vp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (478)
T 1pgj_A 76 VQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS 130 (478)
T ss_dssp CCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred cCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeecc
Confidence 99766777777 45567789999999999998778888989888755544333443
No 91
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.74 E-value=9e-09 Score=101.31 Aligned_cols=102 Identities=20% Similarity=0.189 Sum_probs=70.9
Q ss_pred cccCC-CeEEEEecCHHHHHHHHHHHhcC------CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHH
Q 019387 161 NLLKG-QTVGVIGAGRIGSAYARMMVEGF------KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (342)
Q Consensus 161 ~~L~g-ktvgIvG~G~IG~~vA~~l~~af------g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 233 (342)
..|.| |+|||||+|+||+++|+.| +.. |++|++.++......+... ..+.... .....+++++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nL-r~s~~~~g~G~~ViVg~r~~sks~e~A~--------e~G~~v~-d~ta~s~aEA 118 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNL-RDSLAEAKSDIVVKIGLRKGSKSFDEAR--------AAGFTEE-SGTLGDIWET 118 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHH-HHHHHHTTCCCEEEEEECTTCSCHHHHH--------HTTCCTT-TTCEEEHHHH
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHH-HhcccccCCCCEEEEEeCCchhhHHHHH--------HCCCEEe-cCCCCCHHHH
Confidence 57899 9999999999999999997 455 9998865554322111110 1111100 0012578999
Q ss_pred hhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 234 l~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+++||+|++++|..... .++. +.+..||+|++ |-++-|-
T Consensus 119 a~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 119 VSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp HHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCE-EEESSSH
T ss_pred HhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCe-EEEeCCC
Confidence 99999999999975553 4665 68899999998 5677773
No 92
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.70 E-value=6.9e-08 Score=95.26 Aligned_cols=167 Identities=16% Similarity=0.125 Sum_probs=102.4
Q ss_pred CCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCC------CCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcC
Q 019387 115 TPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG------WLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGF 188 (342)
Q Consensus 115 ~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~------w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~af 188 (342)
..|.|--.|.|.+.+++|...|.. ++|.- |... ..-.=++|||||.|.||..+|..|+ ..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~---------~~w~~p~~~~~~~~~----~~~~i~kVaVIGaG~MG~~IA~~la-~a 76 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLMEAHSLA---------GQWSLPNDRGDHTNS----EAYDVNSVAIIGGGTMGKAMAICFG-LA 76 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHHTTCCT---------TSCBCSTTSCBTTSC----CCCCCCEEEEECCSHHHHHHHHHHH-HT
T ss_pred ccccchhhhhHHHHHHHHhHHHhh---------ccccCCCCccccccC----CcccCCEEEEECCCHHHHHHHHHHH-HC
Confidence 344555666777777777744332 33421 2111 1112268999999999999999985 56
Q ss_pred CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC--------ccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHh
Q 019387 189 KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--------VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (342)
Q Consensus 189 g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~ 260 (342)
|.+|++||++++.........+.... ..+... .......+++ .+++||+|+.++|.+.+.+.-+-++...
T Consensus 77 G~~V~l~D~~~e~a~~~i~~~l~~~~-~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~ 154 (460)
T 3k6j_A 77 GIETFLVVRNEQRCKQELEVMYAREK-SFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLEN 154 (460)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHHHH-HTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHT
T ss_pred CCeEEEEECcHHHHHHHHHHHHHHHH-HcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHh
Confidence 99999999998632111111111111 111110 0112345675 6899999999999777666555566777
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 261 TMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 261 ~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
.++++++|++.+.+ +....+.+++.. .-..+++..|.
T Consensus 155 ~~~~~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn 191 (460)
T 3k6j_A 155 ICKSTCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN 191 (460)
T ss_dssp TSCTTCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS
T ss_pred hCCCCCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc
Confidence 89999999644333 455667666543 45678888777
No 93
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.70 E-value=2.7e-08 Score=90.64 Aligned_cols=102 Identities=13% Similarity=0.082 Sum_probs=74.4
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCch-hHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|||||+|+||+.+|+.|+ ..|.+|++||+... ...+...+ .+ .. .++++++.+||+|++|+|
T Consensus 2 ~I~iIG~G~mG~~la~~l~-~~g~~V~~~~~~~~~~~~~~~~~--------~g-----~~--~~~~~~~~~aDvvi~~v~ 65 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLR-SRGVEVVTSLEGRSPSTIERART--------VG-----VT--ETSEEDVYSCPVVISAVT 65 (264)
T ss_dssp EEEEESCSHHHHHHHHHHH-HTTCEEEECCTTCCHHHHHHHHH--------HT-----CE--ECCHHHHHTSSEEEECSC
T ss_pred eEEEEechHHHHHHHHHHH-HCCCeEEEeCCccCHHHHHHHHH--------CC-----Cc--CCHHHHHhcCCEEEEECC
Confidence 7999999999999999984 67899999988311 12222111 11 11 467888899999999999
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
.......+ .+.+..+++ ++||++.+...+.+.|.+.+.+
T Consensus 66 ~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 66 PGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp GGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred CHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 75555544 455667776 9999998877777788888765
No 94
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.70 E-value=5.2e-08 Score=91.96 Aligned_cols=130 Identities=12% Similarity=0.107 Sum_probs=86.2
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhh----hhhhhhccCCCC---------ccccccCCHH
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA----YGQFLKANGEQP---------VTWKRASSMD 231 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~l~ 231 (342)
-++|||||.|.||..+|..|+ ..|.+|++||++++.. +...+. +.. ....+..+ .......+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~-~~~~~~i~~~l~~-l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQI-TGALENIRKEMKS-LQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHH-HHHHHHHHHHHHH-HHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHHHHHHHHHH-HHHcCccccccchHHHhhceEEeCCHH
Confidence 368999999999999999985 5699999999987643 221110 000 00111100 0123457899
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 232 ~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
+++++||+|+.|+|.+.+.+.-+-++....+++++++++.+-+ +....+.+.+.. .-+..+..-|.
T Consensus 83 eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~ 148 (319)
T 2dpo_A 83 EAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN 148 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS
T ss_pred HHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC
Confidence 9999999999999977666554546677789999999866554 455667776643 33455655554
No 95
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.69 E-value=8.8e-07 Score=81.68 Aligned_cols=171 Identities=18% Similarity=0.188 Sum_probs=108.2
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhC----C-CceEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccCh
Q 019387 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG----D-KCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~----~-~~d~vi~~~~--~~~~~e-~l~~l~~l~~k~i~~~~~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. + +.++++++.+ ..++++ +++...- .--+|.+--
T Consensus 58 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p---------~KDVDG~~~ 127 (286)
T 4a5o_A 58 KDCEEVGFLSQAYDLPA-ETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHP---------DKDVDGFHP 127 (286)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCG---------GGCTTCCSH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCc---------ccccccCCh
Confidence 44566787776655443 357888877652 1 5789998864 344443 3333211 112333321
Q ss_pred hHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHHHHH
Q 019387 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (342)
Q Consensus 103 ~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~~vA 181 (342)
- ..|-...+.++ ....++.-++- ++++ .+.++.||++.|||.|. +|+.+|
T Consensus 128 ~---N~g~l~~g~~~-~~PcTp~gv~~----lL~~---------------------~~i~l~Gk~vvVvGrs~iVG~plA 178 (286)
T 4a5o_A 128 Y---NIGRLAQRMPL-LRPCTPKGIMT----LLAS---------------------TGADLYGMDAVVVGASNIVGRPMA 178 (286)
T ss_dssp H---HHHHHHTTCCS-SCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECTTSTTHHHHH
T ss_pred h---hhHHHhcCCCC-CCCCCHHHHHH----HHHH---------------------hCCCCCCCEEEEECCCchhHHHHH
Confidence 0 01111112232 34455555432 2221 13578999999999988 799999
Q ss_pred HHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 182 ~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
..| ...|++|+...++. .++++.+++||+|+.+++. .++|..+.
T Consensus 179 ~lL-~~~gAtVtv~hs~T----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 222 (286)
T 4a5o_A 179 LEL-LLGGCTVTVTHRFT----------------------------RDLADHVSRADLVVVAAGK----PGLVKGEW--- 222 (286)
T ss_dssp HHH-HHTTCEEEEECTTC----------------------------SCHHHHHHTCSEEEECCCC----TTCBCGGG---
T ss_pred HHH-HHCCCeEEEEeCCC----------------------------cCHHHHhccCCEEEECCCC----CCCCCHHH---
Confidence 997 68899999876431 4788999999999999974 45787755
Q ss_pred CCCCcEEEEcCCCcc
Q 019387 262 MKKEAILVNCSRGPV 276 (342)
Q Consensus 262 mk~ga~lINvaRG~~ 276 (342)
+|+|+++||++.-.+
T Consensus 223 vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 223 IKEGAIVIDVGINRQ 237 (286)
T ss_dssp SCTTCEEEECCSCSS
T ss_pred cCCCeEEEEeccccc
Confidence 599999999986543
No 96
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.69 E-value=9.2e-09 Score=97.95 Aligned_cols=93 Identities=15% Similarity=0.260 Sum_probs=68.1
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc----CCEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE----ADVI 240 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----aDiV 240 (342)
-++|||||+|.||.++|+.| +..|.+|++||++++..... . ..+ .....++++++++ ||+|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L-~~~G~~V~~~dr~~~~~~~a-~--------~~G-----~~~~~~~~e~~~~a~~~aDlV 72 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDL-HAANHSVFGYNRSRSGAKSA-V--------DEG-----FDVSADLEATLQRAAAEDALI 72 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHHHH-H--------HTT-----CCEESCHHHHHHHHHHTTCEE
T ss_pred CCEEEEEeecHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH-H--------HcC-----CeeeCCHHHHHHhcccCCCEE
Confidence 35799999999999999998 67899999999987543211 1 112 1224678887765 7999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
++|+|. ..+..++. .+..+++|++++|++.-.
T Consensus 73 ilavP~-~~~~~vl~--~l~~~~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 73 VLAVPM-TAIDSLLD--AVHTHAPNNGFTDVVSVK 104 (341)
T ss_dssp EECSCH-HHHHHHHH--HHHHHCTTCCEEECCSCS
T ss_pred EEeCCH-HHHHHHHH--HHHccCCCCEEEEcCCCC
Confidence 999994 45666663 344458999999997654
No 97
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.68 E-value=2.6e-08 Score=92.90 Aligned_cols=133 Identities=19% Similarity=0.186 Sum_probs=86.5
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
-+.|+|||||+|.||..+|+.| . .|.+|++||++++.. +...+.+ .. ....+....+++++ +++||+|+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~l-a-aG~~V~v~d~~~~~~-~~~~~~l----~~--~~~~~i~~~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAI-A-SKHEVVLQDVSEKAL-EAAREQI----PE--ELLSKIEFTTTLEK-VKDCDIVME 79 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHH-HHHHHHS----CG--GGGGGEEEESSCTT-GGGCSEEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHH-H-cCCEEEEEECCHHHH-HHHHHHH----HH--HHhCCeEEeCCHHH-HcCCCEEEE
Confidence 4578999999999999999998 5 799999999987643 2221110 00 00001223456766 799999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--CCcccccc
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--LGFSSFKH 311 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lI-NvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--~~~~~tPh 311 (342)
|+|.+.+.+..+-.+ +..+ +|++++ |+|. +....+.+++. ...+..++-.|.+.+ +-+.+.|+
T Consensus 80 avpe~~~vk~~l~~~-l~~~-~~~IlasntSt---i~~~~~a~~~~-~~~r~~G~Hf~~Pv~~~~lveiv~g 145 (293)
T 1zej_A 80 AVFEDLNTKVEVLRE-VERL-TNAPLCSNTSV---ISVDDIAERLD-SPSRFLGVHWMNPPHVMPLVEIVIS 145 (293)
T ss_dssp CCCSCHHHHHHHHHH-HHTT-CCSCEEECCSS---SCHHHHHTTSS-CGGGEEEEEECSSTTTCCEEEEEEC
T ss_pred cCcCCHHHHHHHHHH-HhcC-CCCEEEEECCC---cCHHHHHHHhh-cccceEeEEecCccccCCEEEEECC
Confidence 999888766555443 6667 899885 7876 44455655553 344567777776332 44445554
No 98
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.67 E-value=3.2e-08 Score=91.49 Aligned_cols=109 Identities=19% Similarity=0.194 Sum_probs=77.6
Q ss_pred CeEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~-afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
++|||||+|.||+.+|+.|++ ++|.+|++||++++.. +... ..+... ....++++++.+||+|++|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~-~~~~--------~~g~~~---~~~~~~~~~~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSR-DIAL--------ERGIVD---EATADFKVFAALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHH-HHHH--------HTTSCS---EEESCTTTTGGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHH-HHHH--------HcCCcc---cccCCHHHhhcCCCEEEEcC
Confidence 589999999999999998753 2478999999987542 2111 111110 12356777889999999999
Q ss_pred CCCcccccccCHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 245 VLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~-mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
|.. ....++. +.... ++++.++++++.......+.+.+.+.+
T Consensus 75 p~~-~~~~v~~-~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~ 117 (290)
T 3b1f_A 75 PIK-KTIDFIK-ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKD 117 (290)
T ss_dssp CHH-HHHHHHH-HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTT
T ss_pred CHH-HHHHHHH-HHHhcCCCCCCEEEECCCCchHHHHHHHHhccc
Confidence 953 3344543 34566 899999999998776666778887765
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.63 E-value=3.3e-08 Score=90.24 Aligned_cols=102 Identities=13% Similarity=0.188 Sum_probs=73.3
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.++.+.+|||||+|.||+.+|+.|+ ..|.+ |.+||++++.. +...+.+ + .....+++++++++|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~~~~~~~-~~~~~~~-------g-----~~~~~~~~~~~~~~Dv 71 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALY-RKGFRIVQVYSRTEESA-RELAQKV-------E-----AEYTTDLAEVNPYAKL 71 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSHHHH-HHHHHHT-------T-----CEEESCGGGSCSCCSE
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHH-HCCCeEEEEEeCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCE
Confidence 4556779999999999999999984 56888 88999987542 2221111 1 1224578888899999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccC
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd 278 (342)
|++|+|.. ....++ ++....+++|+++|+++.|-..+
T Consensus 72 vi~av~~~-~~~~v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 72 YIVSLKDS-AFAELL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp EEECCCHH-HHHHHH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred EEEecCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCchH
Confidence 99999954 334444 34456788999999999987654
No 100
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.63 E-value=1.3e-07 Score=88.77 Aligned_cols=116 Identities=18% Similarity=0.174 Sum_probs=79.3
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
.+++|||||+|.||+.+++.|++.+|. +|.+||++++. .+.+.+.+ +. ......+++++++++|+|++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~-~~~l~~~~-------~~---~~~~~~~~~e~v~~aDiVi~ 202 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKEN-AEKFADTV-------QG---EVRVCSSVQEAVAGADVIIT 202 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHH-HHHHHHHS-------SS---CCEECSSHHHHHTTCSEEEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHH-HHHHHHHh-------hC---CeEEeCCHHHHHhcCCEEEE
Confidence 467999999999999999987655687 89999998754 23322211 10 12234689999999999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF 299 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~ 299 (342)
|+|. +..++.. ..+++|.++++++....-. ..|.+.+.+.. ...+|-.
T Consensus 203 atp~---~~~v~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g--~~~vD~~ 250 (312)
T 2i99_A 203 VTLA---TEPILFG---EWVKPGAHINAVGASRPDW-RELDDELMKEA--VLYVDSQ 250 (312)
T ss_dssp CCCC---SSCCBCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHS--EEEESCH
T ss_pred EeCC---CCcccCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcC--EEEECCH
Confidence 9984 4566655 5789999999997665422 33443333222 2556743
No 101
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.60 E-value=1.5e-07 Score=93.15 Aligned_cols=122 Identities=14% Similarity=0.220 Sum_probs=82.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhh--------hhhhhccCCCCccccccCCHHHHhhc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~a-fg~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~ll~~ 236 (342)
++|+|||+|.||..+|..|++. .|.+|++||++++.. +...... ..+.... ...+.....++++.+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~-~~l~~g~~~i~e~~l~~~~~~~--~~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRI-NAWNSPTLPIYEPGLKEVVESC--RGKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH-HHHTSSSCSSCCTTHHHHHHHH--BTTTEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH-HHHhCCCCCcCCCCHHHHHHHh--hcCCEEEECCHHHHHhc
Confidence 4899999999999999998643 289999999987542 2211000 0000000 00112234678888999
Q ss_pred CCEEEEcCCCCccccccc-------------CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 019387 237 ADVISLHPVLDKTTYHLI-------------NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li-------------~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~ 290 (342)
||+|++|+|...+..+.+ -+.....+++|+++||.+...+-..+.+.+.|++..
T Consensus 83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 999999999655444322 123556789999999999988877888888887753
No 102
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.60 E-value=7.7e-08 Score=85.43 Aligned_cols=95 Identities=16% Similarity=0.213 Sum_probs=68.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+++|+|||.|.||+.+|+.| ...|.+|.++|++++.. +.+ ...+ ... .+++++++++|+|++|
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l-~~~g~~V~~~~r~~~~~-~~~--------~~~g-----~~~-~~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRL-VGSGFKVVVGSRNPKRT-ARL--------FPSA-----AQV-TFQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHH-HHTTCCEEEEESSHHHH-HHH--------SBTT-----SEE-EEHHHHTTSCSEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH--------HHcC-----Cce-ecHHHHHhCCCEEEEC
Confidence 357899999999999999998 56789999999986532 211 1111 111 2788889999999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCcccC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd 278 (342)
+|. .....++. +..+.+|+++|+++.|-..+
T Consensus 91 v~~-~~~~~v~~---l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 91 VFR-EHYSSLCS---LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp SCG-GGSGGGGG---GHHHHTTCEEEECCCCCHHH
T ss_pred CCh-HHHHHHHH---HHHhcCCCEEEEeCCCcccc
Confidence 994 45555653 33333799999999987543
No 103
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.57 E-value=5.2e-07 Score=81.87 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=73.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
.+|||||+|.||+.+++.| ...|.+|.+||++++.. +.+.+.+ + .....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~mG~~~a~~l-~~~g~~v~~~~~~~~~~-~~~~~~~-------g-----~~~~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGL-KQTPHELIISGSSLERS-KEIAEQL-------A-----LPYAMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTSSCEEEEECSSHHHH-HHHHHHH-------T-----CCBCSSHHHHHHTCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHH-HhCCCeEEEECCCHHHH-HHHHHHc-------C-----CEeeCCHHHHHhcCCEEEEEeC
Confidence 4899999999999999997 57788999999987542 2222111 1 1234688899999999999999
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
+... .+.+..+++|.++|+...|-- .+.+.+.+..+
T Consensus 70 -~~~~-----~~v~~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 70 -PQLF-----ETVLKPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp -GGGH-----HHHHTTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred -cHhH-----HHHHHHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 3333 345556778999999976643 45576766543
No 104
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.57 E-value=5.8e-08 Score=85.89 Aligned_cols=80 Identities=15% Similarity=0.227 Sum_probs=60.7
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.++.+++|+|||.|+||..+|+.| ...|.+|.+||++++ .+++||+|
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l-~~~g~~V~~~~~~~~--------------------------------~~~~aD~v 61 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNF-EIAGHEVTYYGSKDQ--------------------------------ATTLGEIV 61 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHH-HHTTCEEEEECTTCC--------------------------------CSSCCSEE
T ss_pred cccCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHH--------------------------------HhccCCEE
Confidence 467889999999999999999998 477999999987531 35789999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~ 276 (342)
++|+| ++.++.++.+ ....++ ++++|++++|--
T Consensus 62 i~av~-~~~~~~v~~~-l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 62 IMAVP-YPALAALAKQ-YATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp EECSC-HHHHHHHHHH-THHHHT-TSEEEECCCCBC
T ss_pred EEcCC-cHHHHHHHHH-HHHhcC-CCEEEEECCCCC
Confidence 99999 5666666543 334567 999999999765
No 105
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.56 E-value=2.8e-07 Score=90.21 Aligned_cols=124 Identities=15% Similarity=0.259 Sum_probs=82.7
Q ss_pred cccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhh--------hhhhhccCCCCccccccCCH
Q 019387 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 159 ~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l 230 (342)
.+++..-.+|+|||+|.||..+|..|+ . |.+|++||+.++. .+...... ..++.. . ........++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~~~~-v~~l~~g~~~i~e~~l~~ll~~-~--~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIA-Q-NHEVVALDIVQAK-VDMLNQKISPIVDKEIQEYLAE-K--PLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHH-HHHHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHH-c-CCeEEEEecCHHH-hhHHhccCCccccccHHHHHhh-c--cCCeEEEcCH
Confidence 456666779999999999999999985 4 9999999998754 22221110 000000 0 0123344688
Q ss_pred HHHhhcCCEEEEcCCCCccc-------ccccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 231 DEVLREADVISLHPVLDKTT-------YHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t-------~~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
++.+++||+|++|+|...+. ..+.. +.... +++|+++|+.+.-.+-..+.+.+.+.+.
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 89999999999999965321 11221 34455 9999999999988887888888888764
No 106
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.55 E-value=1e-07 Score=87.41 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=73.0
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl 246 (342)
+|+|||+|+||+.+|+.| ...|.+|++||++++.. +... . .+... ....+++++ .++|+|++|+|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~-~~~~-~-------~g~~~---~~~~~~~~~-~~~D~vi~av~~ 67 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDL-RRRGHYLIGVSRQQSTC-EKAV-E-------RQLVD---EAGQDLSLL-QTAKIIFLCTPI 67 (279)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHH-H-------TTSCS---EEESCGGGG-TTCSEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHH-HHCCCEEEEEECCHHHH-HHHH-h-------CCCCc---cccCCHHHh-CCCCEEEEECCH
Confidence 799999999999999997 56789999999987543 2211 1 11111 123567788 899999999994
Q ss_pred CcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 019387 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 247 ~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL 286 (342)
..+..++. +....+++++++||++.......+.+.+.+
T Consensus 68 -~~~~~~~~-~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~ 105 (279)
T 2f1k_A 68 -QLILPTLE-KLIPHLSPTAIVTDVASVKTAIAEPASQLW 105 (279)
T ss_dssp -HHHHHHHH-HHGGGSCTTCEEEECCSCCHHHHHHHHHHS
T ss_pred -HHHHHHHH-HHHhhCCCCCEEEECCCCcHHHHHHHHHHh
Confidence 34455553 445678999999999776655555555543
No 107
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.54 E-value=1.9e-07 Score=84.50 Aligned_cols=105 Identities=23% Similarity=0.315 Sum_probs=73.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc----EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM----NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
++|||||+|+||+.+|+.| ...|. +|.+||++++.. +.+.+.+ +.....+.++++++||+|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l-~~~g~~~~~~V~~~~r~~~~~-~~~~~~~------------g~~~~~~~~e~~~~aDvVi 68 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGM-INKNIVSSNQIICSDLNTANL-KNASEKY------------GLTTTTDNNEVAKNADILI 68 (247)
T ss_dssp CCEEEECCSHHHHHHHHHH-HHTTSSCGGGEEEECSCHHHH-HHHHHHH------------CCEECSCHHHHHHHCSEEE
T ss_pred CeEEEECccHHHHHHHHHH-HhCCCCCCCeEEEEeCCHHHH-HHHHHHh------------CCEEeCChHHHHHhCCEEE
Confidence 5899999999999999998 46687 999999987542 2222111 1223468899999999999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+|+|. .....++ ++....+++|.++|.+.-| +..+.|.+.+..
T Consensus 69 lav~~-~~~~~v~-~~l~~~l~~~~~vvs~~~g--i~~~~l~~~~~~ 111 (247)
T 3gt0_A 69 LSIKP-DLYASII-NEIKEIIKNDAIIVTIAAG--KSIESTENAFNK 111 (247)
T ss_dssp ECSCT-TTHHHHC----CCSSCTTCEEEECSCC--SCHHHHHHHHCS
T ss_pred EEeCH-HHHHHHH-HHHHhhcCCCCEEEEecCC--CCHHHHHHHhCC
Confidence 99973 3444444 3445567899999977655 345667666643
No 108
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.50 E-value=1.4e-07 Score=87.16 Aligned_cols=92 Identities=18% Similarity=0.294 Sum_probs=68.0
Q ss_pred CeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
++|||||+ |+||+.+|+.| ...|.+|++||++++.. +...+ .+. . ..+..+++++||+|++|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l-~~~g~~V~~~~r~~~~~-~~~~~--------~g~-----~-~~~~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKI-HDSAHHLAAIEIAPEGR-DRLQG--------MGI-----P-LTDGDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHSSSEEEEECCSHHHH-HHHHH--------TTC-----C-CCCSSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHh--------cCC-----C-cCCHHHHhcCCCEEEEcC
Confidence 58999999 99999999998 57789999999986542 22111 111 1 135667889999999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
|.. .+..++ ++....+++|+++|+++.|.
T Consensus 76 ~~~-~~~~v~-~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 76 PDN-IIEKVA-EDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp CHH-HHHHHH-HHHGGGSCTTCEEEESCSHH
T ss_pred Cch-HHHHHH-HHHHHhCCCCCEEEECCCCc
Confidence 953 345555 34556688999999998876
No 109
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.46 E-value=7.5e-07 Score=83.82 Aligned_cols=107 Identities=20% Similarity=0.283 Sum_probs=74.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCC----cEEEEEcCCch-hHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg----~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
...+|||||+|+||..+|+.|+ .-| .+|.+||++++ .+.+... .+ + .....+..+++.+||
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~-~~G~~~~~~V~v~~r~~~~~~~~~l~-~~-------G-----~~~~~~~~e~~~~aD 86 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFT-AAGVLAAHKIMASSPDMDLATVSALR-KM-------G-----VKLTPHNKETVQHSD 86 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHH-HTTSSCGGGEEEECSCTTSHHHHHHH-HH-------T-----CEEESCHHHHHHHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHH-HCCCCCcceEEEECCCccHHHHHHHH-Hc-------C-----CEEeCChHHHhccCC
Confidence 3458999999999999999984 557 78999999874 2222221 11 1 222357888999999
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+|++|+| ......++. +....++++.++|+++-|- ..+.|.+.+.+
T Consensus 87 vVilav~-~~~~~~vl~-~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 87 VLFLAVK-PHIIPFILD-EIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp EEEECSC-GGGHHHHHH-HHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred EEEEEeC-HHHHHHHHH-HHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 9999999 455555553 3445678899999987664 34566666654
No 110
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.43 E-value=1.1e-06 Score=81.29 Aligned_cols=106 Identities=10% Similarity=0.087 Sum_probs=74.4
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc---EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
.++|||||+|+||..+|+.|+ .-|. +|.+||++++.. +...+.+ +.....+..+++++||+|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~-~~g~~~~~V~v~dr~~~~~-~~l~~~~------------gi~~~~~~~~~~~~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRSLDKL-DFFKEKC------------GVHTTQDNRQGALNADVVV 68 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHH-HTTCCGGGEEEECSSSHHH-HHHHHTT------------CCEEESCHHHHHSSCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHHH-HCCCCCCeEEEEeCCHHHH-HHHHHHc------------CCEEeCChHHHHhcCCeEE
Confidence 468999999999999999974 5566 899999987643 2222111 1223468889999999999
Q ss_pred EcCCCCcccccccCHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 242 LHPVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~-mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+|+|. .....++. +.-.. ++++.++|+++-|- ..+.|.+.+..
T Consensus 69 lav~p-~~~~~vl~-~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 69 LAVKP-HQIKMVCE-ELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp ECSCG-GGHHHHHH-HHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred EEeCH-HHHHHHHH-HHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 99973 33344443 23334 67888999887654 45678787764
No 111
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.41 E-value=1.1e-06 Score=81.78 Aligned_cols=130 Identities=13% Similarity=0.151 Sum_probs=80.0
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHH--Hh-hhhhhhhccCCCC-------------ccccccCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF--VT-AYGQFLKANGEQP-------------VTWKRASS 229 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~--~~-~~~~~~~~~~~~~-------------~~~~~~~~ 229 (342)
++|+|||.|.||..+|..|+ ..|.+|++||++++...... .. .+... ...+... .......+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHTVVLVDQTEDILAKSKKGIEESLRKV-AKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHHHHH-HHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHH-HHcCCCCccccchhhHHHHHhceEEecC
Confidence 68999999999999999985 56999999999875432110 00 00000 0111100 01223467
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 230 l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
+++.+++||+|++++|.+.+.+.-+-++....++++++++..+-| +....+.+.+.. .-..++...+.
T Consensus 94 ~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~~-~~~~~g~h~~~ 161 (302)
T 1f0y_A 94 AASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATTR-QDRFAGLHFFN 161 (302)
T ss_dssp HHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEEECS
T ss_pred HHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcCC-cccEEEEecCC
Confidence 888899999999999966544433334445567889999855444 344556655532 12345666554
No 112
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.39 E-value=9.3e-07 Score=81.61 Aligned_cols=169 Identities=15% Similarity=0.146 Sum_probs=107.1
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHHHH-HHhhccCCceEEEccccCCccChhH
Q 019387 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDVNA 104 (342)
Q Consensus 33 l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e~l-~~l~~l~~k~i~~~~~G~d~id~~~ 104 (342)
.++.|.+.+....++ ..+++|+.+.+. .+.++|+++.+ ..++++.+ +... +.--+|.+--..
T Consensus 58 ~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~---------p~KDVDG~~p~n 127 (288)
T 1b0a_A 58 CEEVGFVSRSYDLPE-TTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIH---------PDKDVDGFHPYN 127 (288)
T ss_dssp HHHHTCEECCEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSC---------TTTCTTCCSHHH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccC---------CccCcccCCccc
Confidence 445666665443333 357888877662 25799999863 34444432 2211 111234332111
Q ss_pred HHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHHHHHHH
Q 019387 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (342)
Q Consensus 105 ~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~~vA~~ 183 (342)
.|-.+.+.++ ....+++-++.+ +++ .+.+++|+++.|||.|+ +|+.+|+.
T Consensus 128 ---~g~l~~g~~~-~~PcTp~gi~~l----l~~---------------------~~i~l~gk~vvVIG~s~iVG~p~A~l 178 (288)
T 1b0a_A 128 ---VGRLCQRAPR-LRPCTPRGIVTL----LER---------------------YNIDTFGLNAVVIGASNIVGRPMSME 178 (288)
T ss_dssp ---HHHHHTTCCS-SCCHHHHHHHHH----HHH---------------------TTCCCTTCEEEEECCCTTTHHHHHHH
T ss_pred ---hhHHhCCCCC-CCCCcHHHHHHH----HHH---------------------cCCCCCCCEEEEECCChHHHHHHHHH
Confidence 1111222233 455666663322 221 13578999999999997 59999999
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCC
Q 019387 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (342)
Q Consensus 184 l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk 263 (342)
| ...|++|+..+++. .++.+.+++||+|+.+++. .++|..+. +|
T Consensus 179 L-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~Avg~----p~lI~~~~---vk 222 (288)
T 1b0a_A 179 L-LLAGCTTTVTHRFT----------------------------KNLRHHVENADLLIVAVGK----PGFIPGDW---IK 222 (288)
T ss_dssp H-HTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEEECSCC----TTCBCTTT---SC
T ss_pred H-HHCCCeEEEEeCCc----------------------------hhHHHHhccCCEEEECCCC----cCcCCHHH---cC
Confidence 7 68999999886432 4789999999999999983 34787765 48
Q ss_pred CCcEEEEcCCCcc
Q 019387 264 KEAILVNCSRGPV 276 (342)
Q Consensus 264 ~ga~lINvaRG~~ 276 (342)
+|+++||+|.-.+
T Consensus 223 ~GavVIDVgi~r~ 235 (288)
T 1b0a_A 223 EGAIVIDVGINRL 235 (288)
T ss_dssp TTCEEEECCCEEC
T ss_pred CCcEEEEccCCcc
Confidence 9999999997653
No 113
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.36 E-value=1.2e-06 Score=80.78 Aligned_cols=172 Identities=15% Similarity=0.192 Sum_probs=109.0
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccCh
Q 019387 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e-~l~~l~~l~~k~i~~~~~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. .+.++++++.+ ..++++ +++...-. --+|.+--
T Consensus 56 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~---------KDVDg~~~ 125 (285)
T 3p2o_A 56 KACEECGIKSLVYHLNE-NITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISS---------KDVDGFHP 125 (285)
T ss_dssp HHHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG---------GCTTCCSH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcc---------cccccCCH
Confidence 34455677776554433 357888877662 25789999864 345544 33333211 12333321
Q ss_pred hHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHHHHH
Q 019387 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (342)
Q Consensus 103 ~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~~vA 181 (342)
- ..|-...+.++.....++.-++- ++++ .+.+++||++.|||.|. +|+.+|
T Consensus 126 ~---N~g~l~~g~~~g~~PcTp~gv~~----lL~~---------------------~~i~l~Gk~vvVvGrs~iVG~p~A 177 (285)
T 3p2o_A 126 I---NVGYLNLGLESGFLPCTPLGVMK----LLKA---------------------YEIDLEGKDAVIIGASNIVGRPMA 177 (285)
T ss_dssp H---HHHHHHTTCCSSCCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECCCTTTHHHHH
T ss_pred h---hhhhhhcCCCCCCCCCCHHHHHH----HHHH---------------------hCCCCCCCEEEEECCCchHHHHHH
Confidence 0 01111112232134455555542 2221 13578999999999998 699999
Q ss_pred HHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 182 ~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
..| ...|++|+..+++. .++++.+++||+|+.+++. .++|..+.
T Consensus 178 ~lL-~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 221 (285)
T 3p2o_A 178 TML-LNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIVAAGC----VNLLRSDM--- 221 (285)
T ss_dssp HHH-HHTTCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSSC----TTCBCGGG---
T ss_pred HHH-HHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEEEECCCC----CCcCCHHH---
Confidence 997 68899999886531 4788999999999999983 45787754
Q ss_pred CCCCcEEEEcCCCcc
Q 019387 262 MKKEAILVNCSRGPV 276 (342)
Q Consensus 262 mk~ga~lINvaRG~~ 276 (342)
+|+|+++||++.-.+
T Consensus 222 vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 222 VKEGVIVVDVGINRL 236 (285)
T ss_dssp SCTTEEEEECCCEEC
T ss_pred cCCCeEEEEeccCcc
Confidence 599999999986553
No 114
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.36 E-value=1.2e-06 Score=80.36 Aligned_cols=166 Identities=10% Similarity=0.118 Sum_probs=105.3
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHHHH-HHhhccCCceEEEccccCCccChh
Q 019387 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDVN 103 (342)
Q Consensus 32 ~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e~l-~~l~~l~~k~i~~~~~G~d~id~~ 103 (342)
..++.|. .+....++ ..+++|+.+.+. .+.++|+++.+ ..++++.+ +... +.--+|.+---
T Consensus 51 ~~~~~Gi-~~~~~lp~-~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~---------p~KDVDG~~p~ 119 (276)
T 3ngx_A 51 RGKKIGI-AVDLEKYD-DISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIP---------YYKDVDALSPY 119 (276)
T ss_dssp HHHHHTC-EEEEEEES-SCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSC---------GGGBTTCCSHH
T ss_pred HHHHCCe-EEEEECCC-CCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCC---------CCCcccCCCcc
Confidence 3445666 55444333 357888877762 25799999864 34555433 2211 11223333211
Q ss_pred HHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHHHHHH
Q 019387 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (342)
Q Consensus 104 ~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~~vA~ 182 (342)
..|-.+.+.++ ....++.-++-+ +++ .+ ++||++.|||.|. +|+.+|+
T Consensus 120 ---n~G~l~~g~~~-~~PcTp~gv~~l----L~~---------------------~~--l~Gk~vvVvG~s~iVG~plA~ 168 (276)
T 3ngx_A 120 ---NQGLIALNREF-LVPATPRAVIDI----MDY---------------------YG--YHENTVTIVNRSPVVGRPLSM 168 (276)
T ss_dssp ---HHHHHHTTCCS-SCCHHHHHHHHH----HHH---------------------HT--CCSCEEEEECCCTTTHHHHHH
T ss_pred ---chhhhhcCCCC-CCCCcHHHHHHH----HHH---------------------hC--cCCCEEEEEcCChHHHHHHHH
Confidence 11111222333 344555555422 211 12 7899999999997 7999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcC
Q 019387 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATM 262 (342)
Q Consensus 183 ~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~m 262 (342)
.| .+.|++|++++++. .++++.+++||+|+.+++. .++|..+. +
T Consensus 169 lL-~~~gAtVtv~~~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~---v 212 (276)
T 3ngx_A 169 ML-LNRNYTVSVCHSKT----------------------------KDIGSMTRSSKIVVVAVGR----PGFLNREM---V 212 (276)
T ss_dssp HH-HHTTCEEEEECTTC----------------------------SCHHHHHHHSSEEEECSSC----TTCBCGGG---C
T ss_pred HH-HHCCCeEEEEeCCc----------------------------ccHHHhhccCCEEEECCCC----CccccHhh---c
Confidence 97 68899999886531 4789999999999999984 34787765 5
Q ss_pred CCCcEEEEcCCCc
Q 019387 263 KKEAILVNCSRGP 275 (342)
Q Consensus 263 k~ga~lINvaRG~ 275 (342)
|+|+++||++.-.
T Consensus 213 k~GavVIDvgi~~ 225 (276)
T 3ngx_A 213 TPGSVVIDVGINY 225 (276)
T ss_dssp CTTCEEEECCCEE
T ss_pred cCCcEEEEeccCc
Confidence 9999999998654
No 115
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.35 E-value=1.7e-05 Score=76.31 Aligned_cols=83 Identities=29% Similarity=0.467 Sum_probs=69.0
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCc---EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
..-+|.|+|. |..|+..++.+ +++|+ .|.++|.++..+ + ..+++ +.++|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a-~~lGa~~~~V~v~D~~~~~~---------------g---------~~~~~-i~~aDi 266 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLL-HKVGIPDANILKWDIKETSR---------------G---------GPFDE-IPQADI 266 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHH-HHTTCCGGGEEEECHHHHTT---------------C---------SCCTH-HHHSSE
T ss_pred CCCeEEEEcCCCHHHHHHHHHH-HhCCCCcCceEEeecccccc---------------C---------Cchhh-HhhCCE
Confidence 3568999999 99999999995 89998 899999765221 1 11233 568999
Q ss_pred EEEcCCCCcccccccCHHHHhcC-CCCcEEEEcC
Q 019387 240 ISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~m-k~ga~lINva 272 (342)
|+.|+........+|+++.++.| |+|+++||++
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 99999987778899999999999 9999999996
No 116
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.35 E-value=1.4e-06 Score=80.40 Aligned_cols=170 Identities=13% Similarity=0.194 Sum_probs=107.6
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccCh
Q 019387 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e-~l~~l~~l~~k~i~~~~~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. .+.++++++.+ ..++++ +++...-. | -+|.+--
T Consensus 57 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--K-------DVDG~~~ 126 (285)
T 3l07_A 57 KACAQVGIDSQVITLPE-HTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPE--K-------DVDGFHP 126 (285)
T ss_dssp HHHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--G-------BTTCCSH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcc--c-------ccccCCh
Confidence 34456677776554433 357888877662 25789999864 345544 33333211 1 2333321
Q ss_pred hHHHhCCeeEecC-CCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHHHH
Q 019387 103 NAANKYGIAVGNT-PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAY 180 (342)
Q Consensus 103 ~~~~~~gI~V~n~-~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~~v 180 (342)
- ..|-...+. ++ ....++.-++- ++++ .+.+++||++.|||.|. +|+.+
T Consensus 127 ~---N~G~l~~g~~~~-~~PcTp~gv~~----lL~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~ 177 (285)
T 3l07_A 127 T---NVGRLQLRDKKC-LESCTPKGIMT----MLRE---------------------YGIKTEGAYAVVVGASNVVGKPV 177 (285)
T ss_dssp H---HHHHHHHTCTTC-CCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECCCTTTHHHH
T ss_pred h---heeehhcCCCCC-CCCCCHHHHHH----HHHH---------------------hCCCCCCCEEEEECCCchhHHHH
Confidence 0 011111112 32 34455655552 2221 13579999999999998 69999
Q ss_pred HHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHh
Q 019387 181 ARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (342)
Q Consensus 181 A~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~ 260 (342)
|..| ...|++|+..+++ ..++++.+++||+|+.+++. .++|..+.
T Consensus 178 A~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~-- 222 (285)
T 3l07_A 178 SQLL-LNAKATVTTCHRF----------------------------TTDLKSHTTKADILIVAVGK----PNFITADM-- 222 (285)
T ss_dssp HHHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSEEEECCCC----TTCBCGGG--
T ss_pred HHHH-HHCCCeEEEEeCC----------------------------chhHHHhcccCCEEEECCCC----CCCCCHHH--
Confidence 9997 6889999987643 14788999999999999983 45687754
Q ss_pred cCCCCcEEEEcCCCc
Q 019387 261 TMKKEAILVNCSRGP 275 (342)
Q Consensus 261 ~mk~ga~lINvaRG~ 275 (342)
+|+|+++||++.-.
T Consensus 223 -vk~GavVIDvgi~~ 236 (285)
T 3l07_A 223 -VKEGAVVIDVGINH 236 (285)
T ss_dssp -SCTTCEEEECCCEE
T ss_pred -cCCCcEEEEecccC
Confidence 59999999998654
No 117
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.35 E-value=1.5e-06 Score=79.85 Aligned_cols=172 Identities=18% Similarity=0.190 Sum_probs=110.6
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccCh
Q 019387 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e-~l~~l~~l~~k~i~~~~~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. .+.++|+++.+ ..++++ +++...-. | -+|.+--
T Consensus 55 k~~~~~Gi~~~~~~lp~-~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~--K-------DVDG~~p 124 (281)
T 2c2x_A 55 ADCAKVGITSIRRDLPA-DISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPA--K-------DADGLHP 124 (281)
T ss_dssp HHHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--G-------BTTSCCH
T ss_pred HHHHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCcc--C-------CccCCCh
Confidence 33455677776655443 357888877662 25799999864 344444 33332111 1 3444321
Q ss_pred hHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHH-HHHHH
Q 019387 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAYA 181 (342)
Q Consensus 103 ~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~I-G~~vA 181 (342)
.. .|-.+.+.++ +...+++.++-++ ++ .+.++.||++.|||.|.| |+.+|
T Consensus 125 ~n---~g~l~~g~~~-~~PcTp~gi~~ll----~~---------------------~~i~l~gk~vvVvG~s~iVG~p~A 175 (281)
T 2c2x_A 125 TN---LGRLVLGTPA-PLPCTPRGIVHLL----RR---------------------YDISIAGAHVVVIGRGVTVGRPLG 175 (281)
T ss_dssp HH---HHHHHHTCCC-CCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECCCTTTHHHHH
T ss_pred hh---HHHHhCCCCC-CCCChHHHHHHHH----HH---------------------cCCCCCCCEEEEECCCcHHHHHHH
Confidence 11 1111222233 4556666544322 21 135789999999999986 99999
Q ss_pred HHHHhcC--CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHH
Q 019387 182 RMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERL 259 (342)
Q Consensus 182 ~~l~~af--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l 259 (342)
+.| ... |++|+..+++. .++.+.+++||+|+.+++. .++|..+.
T Consensus 176 ~lL-~~~g~~atVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~- 221 (281)
T 2c2x_A 176 LLL-TRRSENATVTLCHTGT----------------------------RDLPALTRQADIVVAAVGV----AHLLTADM- 221 (281)
T ss_dssp HHH-TSTTTCCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSCC----TTCBCGGG-
T ss_pred HHH-hcCCCCCEEEEEECch----------------------------hHHHHHHhhCCEEEECCCC----CcccCHHH-
Confidence 997 677 89999886432 4789999999999999983 34688776
Q ss_pred hcCCCCcEEEEcCCCccc
Q 019387 260 ATMKKEAILVNCSRGPVI 277 (342)
Q Consensus 260 ~~mk~ga~lINvaRG~~v 277 (342)
+|+|+++||+|.-.+-
T Consensus 222 --vk~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 222 --VRPGAAVIDVGVSRTD 237 (281)
T ss_dssp --SCTTCEEEECCEEEET
T ss_pred --cCCCcEEEEccCCCCC
Confidence 4899999999976543
No 118
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.35 E-value=2.1e-06 Score=84.58 Aligned_cols=119 Identities=15% Similarity=0.186 Sum_probs=77.6
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCC--------CccccccCCHHHHhhcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~ll~~a 237 (342)
.+|+|||+|.||..+|..|+ ..|.+|++||++++. .+.......... ..+.. ........++++++++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La-~~G~~V~~~D~~~~~-v~~l~~g~~~i~-e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFA-ELGANVRCIDTDRNK-IEQLNSGTIPIY-EPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHH-HHHHHHTCSCCC-STTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHH-hcCCEEEEEECCHHH-HHHHHcCCCccc-CCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 48999999999999999985 569999999998753 222221100000 00000 01122346889999999
Q ss_pred CEEEEcCCCCcc---------cccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 238 DVISLHPVLDKT---------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~~pl~~~---------t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
|+|++|+|...+ .+..+ +.....+++|.++|+.+.-..=..+.+.+.+++
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 999999996532 22222 345667899999999986544445566666654
No 119
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.34 E-value=1.4e-06 Score=85.46 Aligned_cols=119 Identities=10% Similarity=0.099 Sum_probs=77.4
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCC--------CccccccCCHHHHhhcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREAD 238 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~ll~~aD 238 (342)
+|+|||+|.||..+|..|+ ..|.+|++||++++.. +........ +...+.. .-......++++.+++||
T Consensus 2 kI~VIG~G~vG~~~A~~la-~~G~~V~~~d~~~~~~-~~l~~~~~~-i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLS-ARGHEVIGVDVSSTKI-DLINQGKSP-IVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp EEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTCCS-SCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHH-HCCCEEEEEECCHHHH-HHHhCCCCC-cCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 7999999999999999985 6799999999987542 222110000 0000000 001223467888899999
Q ss_pred EEEEcCCCCcccccccC--------HHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHc
Q 019387 239 VISLHPVLDKTTYHLIN--------KERLATMKK---EAILVNCSRGPVID-EVALVEHLKQ 288 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~--------~~~l~~mk~---ga~lINvaRG~~vd-~~aL~~aL~~ 288 (342)
+|++|+|...+..+..| +.....+++ |.++|+.+...+-. .+.+.+.+++
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 99999996554333322 334456788 99999998666544 5667777765
No 120
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.34 E-value=5.4e-07 Score=81.78 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=68.3
Q ss_pred eEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|||||+|+||+.+|+.|+ ..| .+|.+||++++.. +...+.+ + .....++++++ ++|+|++|+|
T Consensus 2 ~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~r~~~~~-~~~~~~~-------g-----~~~~~~~~~~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLV-KQGGYRIYIANRGAEKR-ERLEKEL-------G-----VETSATLPELH-SDDVLILAVK 66 (263)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHCSCEEEEECSSHHHH-HHHHHHT-------C-----CEEESSCCCCC-TTSEEEECSC
T ss_pred EEEEECchHHHHHHHHHHH-HCCCCeEEEECCCHHHH-HHHHHhc-------C-----CEEeCCHHHHh-cCCEEEEEeC
Confidence 7999999999999999984 568 8999999987542 2221111 1 11234566777 8999999999
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
......++.. +.. + +.++|+++-|-- .+.|.+.+..+
T Consensus 67 -~~~~~~v~~~--l~~-~-~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 67 -PQDMEAACKN--IRT-N-GALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp -HHHHHHHHTT--CCC-T-TCEEEECCTTCC--HHHHHHHTTSC
T ss_pred -chhHHHHHHH--hcc-C-CCEEEEecCCCC--HHHHHHHcCCC
Confidence 4554444431 222 4 899999865543 36677777653
No 121
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.33 E-value=1.9e-06 Score=80.02 Aligned_cols=171 Identities=13% Similarity=0.192 Sum_probs=108.4
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCCC--C--ccHHHH-HHhhccCCceEEEccccCCccC
Q 019387 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLTE--D--WGETLF-AALSRAGGKAFSNMAVGYNNVD 101 (342)
Q Consensus 32 ~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~~--~--~~~e~l-~~l~~l~~k~i~~~~~G~d~id 101 (342)
..++.|.+.+....++ ..+++|+.+.+. .+.++|+++.+- . ++++.+ +...- .--+|.+-
T Consensus 59 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p---------~KDVDG~h 128 (301)
T 1a4i_A 59 AAEEIGIKATHIKLPR-TTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAP---------EKDVDGLT 128 (301)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCG---------GGBTTCCS
T ss_pred HHHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCC---------CCCccCCC
Confidence 3455677776655443 357888877663 257999998642 3 555433 32211 11334432
Q ss_pred hhHHHhCCeeEecC--CCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHH
Q 019387 102 VNAANKYGIAVGNT--PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGS 178 (342)
Q Consensus 102 ~~~~~~~gI~V~n~--~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~ 178 (342)
-... |-.+.+. + .....+++-++ .++++ .+.++.|+++.|||.|+ +|+
T Consensus 129 p~N~---G~l~~g~~~~-~~~PcTp~gi~----~ll~~---------------------~~i~l~gk~vvVIG~s~iVG~ 179 (301)
T 1a4i_A 129 SINA---GRLARGDLND-CFIPCTPKGCL----ELIKE---------------------TGVPIAGRHAVVVGRSKIVGA 179 (301)
T ss_dssp HHHH---HHHHTTCCSS-CCCCHHHHHHH----HHHHT---------------------TTCCCTTCEEEEECCCTTTHH
T ss_pred hhhH---HHHhcCCCCC-CccCchHHHHH----HHHHH---------------------cCCCCCCCEEEEECCCchHHH
Confidence 1111 1111111 2 24445565533 22222 13579999999999997 699
Q ss_pred HHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHH
Q 019387 179 AYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER 258 (342)
Q Consensus 179 ~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~ 258 (342)
.+|+.| ...|++|+..+++ ..++.+.+++||+|+.+++. .++|..+.
T Consensus 180 p~A~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 226 (301)
T 1a4i_A 180 PMHDLL-LWNNATVTTCHSK----------------------------TAHLDEEVNKGDILVVATGQ----PEMVKGEW 226 (301)
T ss_dssp HHHHHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred HHHHHH-HhCCCeEEEEECC----------------------------cccHHHHhccCCEEEECCCC----cccCCHHH
Confidence 999997 6899999988643 24789999999999999985 34788776
Q ss_pred HhcCCCCcEEEEcCCCccc
Q 019387 259 LATMKKEAILVNCSRGPVI 277 (342)
Q Consensus 259 l~~mk~ga~lINvaRG~~v 277 (342)
+|+|+++||+|.-.+-
T Consensus 227 ---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 227 ---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp ---SCTTCEEEECCCBC--
T ss_pred ---cCCCcEEEEccCCCcc
Confidence 5799999999986543
No 122
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.32 E-value=1.5e-06 Score=80.75 Aligned_cols=171 Identities=20% Similarity=0.211 Sum_probs=108.6
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccCh
Q 019387 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e-~l~~l~~l~~k~i~~~~~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. .+.++++++.+ ..++++ +++...- .--+|.+--
T Consensus 60 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p---------~KDVDG~~~ 129 (300)
T 4a26_A 60 KAAAEVGMASFNVELPE-DISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHP---------HKDADALLP 129 (300)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCG---------GGCTTCCSH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCc---------ccccccCCc
Confidence 44556787776655443 357888877662 25789999864 345544 3333221 112333321
Q ss_pred hHHHhCCeeEec--CCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCH-HHHH
Q 019387 103 NAANKYGIAVGN--TPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSA 179 (342)
Q Consensus 103 ~~~~~~gI~V~n--~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~-IG~~ 179 (342)
- ..|-...+ .++ ....+++-++-+ ++++ +.+++||++.|||.|. +|+.
T Consensus 130 ~---N~G~l~~g~~~~~-~~PcTp~gv~~l----L~~~---------------------~i~l~Gk~vvVIG~s~iVG~p 180 (300)
T 4a26_A 130 V---NVGLLHYKGREPP-FTPCTAKGVIVL----LKRC---------------------GIEMAGKRAVVLGRSNIVGAP 180 (300)
T ss_dssp H---HHHHHHCTTCCCS-CCCHHHHHHHHH----HHHH---------------------TCCCTTCEEEEECCCTTTHHH
T ss_pred c---eEEEeecCCCcCC-CCCCCHHHHHHH----HHHc---------------------CCCCCCCEEEEECCCchHHHH
Confidence 0 11111111 122 345566655432 2211 3578999999999998 6999
Q ss_pred HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHH--HHhhcCCEEEEcCCCCcccccccCHH
Q 019387 180 YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD--EVLREADVISLHPVLDKTTYHLINKE 257 (342)
Q Consensus 180 vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~ll~~aDiV~l~~pl~~~t~~li~~~ 257 (342)
+|..| ...|++|++++++. .+++ +.+++||+|+.++|. .++|..+
T Consensus 181 ~A~lL-~~~gAtVtv~~~~T----------------------------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~ 227 (300)
T 4a26_A 181 VAALL-MKENATVTIVHSGT----------------------------STEDMIDYLRTADIVIAAMGQ----PGYVKGE 227 (300)
T ss_dssp HHHHH-HHTTCEEEEECTTS----------------------------CHHHHHHHHHTCSEEEECSCC----TTCBCGG
T ss_pred HHHHH-HHCCCeEEEEeCCC----------------------------CCchhhhhhccCCEEEECCCC----CCCCcHH
Confidence 99997 68899999987632 2455 889999999999984 3578775
Q ss_pred HHhcCCCCcEEEEcCCCcc
Q 019387 258 RLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 258 ~l~~mk~ga~lINvaRG~~ 276 (342)
. +|+|+++||++.-.+
T Consensus 228 ~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 228 W---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp G---SCTTCEEEECCCEEE
T ss_pred h---cCCCcEEEEEeccCC
Confidence 5 599999999986544
No 123
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.31 E-value=3.1e-06 Score=83.30 Aligned_cols=119 Identities=14% Similarity=0.192 Sum_probs=78.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCC--------CCccccccCCHHHHhhcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE--------QPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~ll~~a 237 (342)
-+++|||+|.+|..+|..|+ ..|.+|++||+.++. .+........ +...+. .+-.....+++++.+++|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La-~~G~~V~~~D~~~~k-v~~l~~g~~~-~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFS-DFGHEVVCVDKDARK-IELLHQNVMP-IYEPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCSTT-HHHHTTTCCS-SCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred eEEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCHHH-HHHHhcCCCC-ccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 47999999999999999985 569999999998764 2222111000 000000 001123346888999999
Q ss_pred CEEEEcCCCCcc----------cccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 238 DVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~~pl~~~----------t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
|+|++|+|...+ .+..+ +.....+++|.++|+.+.-..=..+.+.+.+.+
T Consensus 86 Dvvii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 86 DAVFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp SEEEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999999985432 12222 456678999999999986555556667776655
No 124
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.31 E-value=1.6e-06 Score=86.29 Aligned_cols=131 Identities=20% Similarity=0.277 Sum_probs=84.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhh---hccCCCCc--------cccccCCHHHHh
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFL---KANGEQPV--------TWKRASSMDEVL 234 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~~~~~l~~ll 234 (342)
++|||||.|.||..+|..|+ ..|.+|++||++++.... ........+ ...+.... ......+++ .+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~l~~-~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDISAEALTR-AIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-AL 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHH-HHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GG
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEECCHHHHHH-HHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hh
Confidence 58999999999999999985 569999999998764322 111100000 01111100 112235665 57
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEE-EEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAIL-VNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE 303 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~l-INvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP 303 (342)
++||+|+.++|.+.+.+.-+-++....++++++| .|+|. +....|.+.+.. .-..+++..|.+-|
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSt---i~i~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSS---ISITAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSS---SCHHHHTTTSSS-GGGEEEEEECSSTT
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCC---CCHHHHHHHccC-ccceEEeeecChhh
Confidence 8999999999977666544445566778999999 46664 444566666542 44567888777555
No 125
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.28 E-value=2.3e-06 Score=75.01 Aligned_cols=122 Identities=11% Similarity=0.145 Sum_probs=80.3
Q ss_pred eEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|+|+| .|.||+.+++.| ...|.+|.++|++++.. +...+.++.... ..... ..+++++++++|+|++|+|
T Consensus 2 ~i~iiGa~G~~G~~ia~~l-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRL-ATLGHEIVVGSRREEKA-EAKAAEYRRIAG-----DASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp EEEEETTTSHHHHHHHHHH-HTTTCEEEEEESSHHHH-HHHHHHHHHHHS-----SCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred eEEEEcCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHHhccccc-----cCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 799999 999999999998 46789999999986532 222211111110 00111 2578888999999999998
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHcCCceEEEEecCCCCC
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVID------------EVALVEHLKQNPMFRVGLDVFEVTE 303 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd------------~~aL~~aL~~g~i~~aaLDV~~~EP 303 (342)
. ..++.++. +....++ +.++|+++.|--.+ .+.+.+.+.. ...++++.++|
T Consensus 74 ~-~~~~~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~ 136 (212)
T 1jay_A 74 W-EHAIDTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIP 136 (212)
T ss_dssp H-HHHHHHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCC
T ss_pred h-hhHHHHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchH
Confidence 3 34444443 2223444 89999999876533 4667776653 24568887777
No 126
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.28 E-value=3.8e-06 Score=80.33 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=72.9
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhh-hhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA-YGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
..+|+|||.|.||..+|..|+ .-|.+|.+|++.++.. +...+. ...........+.......++++.+++||+|+++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La-~~G~~V~l~~r~~~~~-~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLA-RKGQKVRLWSYESDHV-DEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV 106 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHH-TTTCCEEEECSCHHHH-HHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence 468999999999999999984 6789999999986532 221110 0000000000011223346888999999999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCH
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
+|. ...+.++ ++....+++++++|+++-|-..++
T Consensus 107 Vp~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t 140 (356)
T 3k96_A 107 VPS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGS 140 (356)
T ss_dssp CCH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTT
T ss_pred CCH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCc
Confidence 994 3444444 344566889999999988765553
No 127
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.27 E-value=2.6e-06 Score=80.60 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=74.7
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCC-Cccc-cccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-PVTW-KRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~ll~~aDiV~l~ 243 (342)
++|+|||.|.||..+|..| ...|.+|.+||++++.. +...+..+..+...+.. .... ....+++++++.+|+|++|
T Consensus 5 mki~iiG~G~~G~~~a~~L-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYL-ALKGQSVLAWDIDAQRI-KEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5899999999999999998 46789999999986532 22211110000000000 0001 1246788888999999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+|... +..++ +.....+++|+++|+. -|.......+.+.+.+
T Consensus 83 v~~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 83 VPAIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp SCGGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred CCchH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 99643 34444 4455678999999998 4422344445565654
No 128
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.26 E-value=1.8e-06 Score=81.17 Aligned_cols=97 Identities=16% Similarity=0.196 Sum_probs=69.8
Q ss_pred ccccCCCeEEEEecCHH-HHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccc------c--CCH
Q 019387 160 GNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR------A--SSM 230 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~I-G~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~l 230 (342)
+.++.|+++.|||.|.| |+.+|+.| .+.|++|+++|++.....+. ...... ..+. . .++
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L-~~~gAtVtv~nR~~~~l~~r----------a~~la~-~~~~~t~~~~t~~~~L 239 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALL-ANDGATVYSVDVNNIQKFTR----------GESLKL-NKHHVEDLGEYSEDLL 239 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHH-HTTSCEEEEECSSEEEEEES----------CCCSSC-CCCEEEEEEECCHHHH
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHH-HHCCCEEEEEeCchHHHHhH----------HHHHhh-hcccccccccccHhHH
Confidence 56799999999999986 99999997 68899999998874321000 000000 0011 1 478
Q ss_pred HHHhhcCCEEEEcCCCCcccccc-cCHHHHhcCCCCcEEEEcCCCc
Q 019387 231 DEVLREADVISLHPVLDKTTYHL-INKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t~~l-i~~~~l~~mk~ga~lINvaRG~ 275 (342)
++.+++||+|+.+++. .++ |..+. +|+|+++||+|--.
T Consensus 240 ~e~l~~ADIVIsAtg~----p~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 240 KKCSLDSDVVITGVPS----ENYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHCSEEEECCCC----TTCCBCTTT---SCTTEEEEECSSSC
T ss_pred HHHhccCCEEEECCCC----CcceeCHHH---cCCCeEEEEcCCCc
Confidence 9999999999999874 234 77765 58999999998654
No 129
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.25 E-value=6e-06 Score=75.23 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=74.8
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
+.| +++|+|.|.+|++++..| ...|+ +|.+++|++++. +...+ ........++++.++++|+|+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L-~~~G~~~I~v~nR~~~ka-~~la~------------~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYAL-LQMGVKDIWVVNRTIERA-KALDF------------PVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHH-HHTTCCCEEEEESCHHHH-HTCCS------------SCEEEEGGGHHHHHHTCSEEE
T ss_pred CCC-eEEEECcHHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHH------------HcccCCHHHHHhhhcCCCEEE
Confidence 578 999999999999999997 57898 899999987532 21110 011112357888899999999
Q ss_pred EcCCCC--cccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 242 LHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 242 l~~pl~--~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
.++|.. ++ ...++.+. ++++.+++++.-+ .+.-|.+|.+.|
T Consensus 172 natp~gm~p~-~~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 172 NTTSVGMKGE-ELPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp ECSSTTTTSC-CCSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred ECCCCCCCCC-CCCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 999864 22 23455444 5689999999988 555566666665
No 130
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.23 E-value=5.1e-06 Score=82.56 Aligned_cols=121 Identities=17% Similarity=0.175 Sum_probs=76.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhccCC-------CCccccccCCHHHHhhcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-------QPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~a-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~ll~~a 237 (342)
.+|+|||+|.||..+|..|++. .|.+|++||++++.. +........ +...+. .........++.+.+++|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v-~~l~~g~~~-i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKI-AEWNSDKLP-IYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH-HHHTSSSCS-SCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH-HHHHCCCCC-cCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 4899999999999999998654 378999999987532 222110000 000000 000122345777888999
Q ss_pred CEEEEcCCCCcccc-----------ccc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 238 DVISLHPVLDKTTY-----------HLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~~pl~~~t~-----------~li--~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
|+|++|+|...... .+. -+.....+++|.++|+.+.-..=..+.+.+.+++
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 99999998643211 111 1345567899999999876555455667777776
No 131
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.23 E-value=3.4e-06 Score=77.87 Aligned_cols=108 Identities=14% Similarity=0.127 Sum_probs=72.5
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|+++.|+|.|.+|++++..| ...|+ +|.+++|+.+.. +. +. .........++++.+.++|+|
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a-~~-------la-----~~~~~~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANEL-YKIVRPTLTVANRTMSRF-NN-------WS-----LNINKINLSHAESHLDEFDII 179 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHH-HTTCCSCCEEECSCGGGG-TT-------CC-----SCCEEECHHHHHHTGGGCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HH-------HH-----HhcccccHhhHHHHhcCCCEE
Confidence 57899999999999999999998 58898 899999987542 11 00 011111234567778899999
Q ss_pred EEcCCCC--cccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 241 SLHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 241 ~l~~pl~--~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
+.++|.. ++....++ .+.++++.+++++.-.+.. +. |.++.++
T Consensus 180 InaTp~Gm~~~~~~~l~---~~~l~~~~~V~D~vY~P~~-T~-ll~~A~~ 224 (277)
T 3don_A 180 INTTPAGMNGNTDSVIS---LNRLASHTLVSDIVYNPYK-TP-ILIEAEQ 224 (277)
T ss_dssp EECCC-------CCSSC---CTTCCSSCEEEESCCSSSS-CH-HHHHHHH
T ss_pred EECccCCCCCCCcCCCC---HHHcCCCCEEEEecCCCCC-CH-HHHHHHH
Confidence 9999964 23222233 4668899999999877544 33 5544444
No 132
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.21 E-value=2.8e-06 Score=76.95 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=67.0
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCC----cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
..+|||||+|+||+.+|+.|+ ..| .+|.+||++++. .+.....+.++++++||+|
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~-~~g~~~~~~v~~~~~~~~~--------------------~g~~~~~~~~~~~~~~D~v 62 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIA-NANIIKKENLFYYGPSKKN--------------------TTLNYMSSNEELARHCDII 62 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHH-HHTSSCGGGEEEECSSCCS--------------------SSSEECSCHHHHHHHCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCCCCCeEEEEeCCccc--------------------CceEEeCCHHHHHhcCCEE
Confidence 358999999999999999984 456 689999987642 0122345788899999999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
++|+| ......++. +....++ +..+|...-| ++.+.+.+.+..+
T Consensus 63 i~~v~-~~~~~~v~~-~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 63 VCAVK-PDIAGSVLN-NIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp EECSC-TTTHHHHHH-HSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred EEEeC-HHHHHHHHH-HHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 99999 345544443 2334454 4555555443 3445666666543
No 133
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.20 E-value=5.7e-06 Score=80.32 Aligned_cols=115 Identities=17% Similarity=0.258 Sum_probs=74.8
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhh--------hhhhccCCCCccccccCCHHHHhhcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYG--------QFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
+|+|||+|.||..+|..|+ . |.+|++||++++.. +....... .+... . ........++++.+++||
T Consensus 2 kI~VIG~G~vG~~~A~~La-~-G~~V~~~d~~~~~~-~~l~~~~~~i~e~~l~~~~~~-~--~~~l~~t~~~~~~~~~aD 75 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLS-L-QNEVTIVDILPSKV-DKINNGLSPIQDEYIEYYLKS-K--QLSIKATLDSKAAYKEAE 75 (402)
T ss_dssp EEEEECCSHHHHHHHHHHT-T-TSEEEEECSCHHHH-HHHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCHHHHHHHCS
T ss_pred EEEEECCCHHHHHHHHHHh-C-CCEEEEEECCHHHH-HHHHcCCCCcCCCCHHHHHHh-c--cCcEEEeCCHHHHhcCCC
Confidence 7999999999999999985 5 89999999986532 22211100 00000 0 001123356778889999
Q ss_pred EEEEcCCCCc----------ccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 239 VISLHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 239 iV~l~~pl~~----------~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
+|++|+|... .....+ +.... +++|.++|+.+.-.+-..+.+.+.+.+.
T Consensus 76 vviiavpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 76 LVIIATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp EEEECCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred EEEEecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 9999999753 122222 23445 8899999997766665667777766543
No 134
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.20 E-value=3.6e-06 Score=79.73 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=68.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCC-------cEEEEEcCCchh----HHHHHHhhhhhhhh-ccCC-CCccccccCCHHH
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQAT----RLEKFVTAYGQFLK-ANGE-QPVTWKRASSMDE 232 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg-------~~V~~~d~~~~~----~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~ 232 (342)
++|+|||.|+||..+|..|+ ..| .+|.+||++++. ..+..... ..... ..+. .+.......++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~-~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVG-GNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQ-HENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHH-SCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CeEEEECCCHHHHHHHHHHH-hcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhc-CcccccCCcccCccCeEEEcCHHH
Confidence 58999999999999999985 446 899999988651 12221110 00000 0000 0112223467888
Q ss_pred HhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc
Q 019387 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 233 ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~ 276 (342)
++++||+|++|+|. .....++ ++....+++++++|+++.|-.
T Consensus 87 ~~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 87 AAEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HHcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 89999999999994 3444444 234456788999999988754
No 135
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.18 E-value=1.8e-05 Score=73.61 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=76.4
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|++++|+|.|.+|+.++..| ...|+ +|.+++|++++ .+.+.+.++. .. . ......++.+.+.++|+|
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L-~~~G~~~V~v~nR~~~k-a~~la~~~~~----~~--~-~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSL-LSTAAERIDMANRTVEK-AERLVREGDE----RR--S-AYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECSSHHH-HHHHHHHSCS----SS--C-CEECHHHHHHTGGGCSEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHH-HHCCCCEEEEEeCCHHH-HHHHHHHhhh----cc--C-ceeeHHHHHhhhccCCEE
Confidence 46799999999999999999998 57898 99999998753 2222221110 00 0 011113566778899999
Q ss_pred EEcCCCCcccc--c-ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 241 SLHPVLDKTTY--H-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 241 ~l~~pl~~~t~--~-li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
+.|+|...... . .++ .+.+++|.+++|++-.+... . |.++.++..+
T Consensus 209 In~t~~~~~~~~~~~~i~---~~~l~~~~~v~D~~y~P~~T-~-ll~~A~~~G~ 257 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLS---LERLRPGVIVSDIIYNPLET-K-WLKEAKARGA 257 (297)
T ss_dssp EECSCTTCSSCCSCCSSC---CTTCCTTCEEEECCCSSSSC-H-HHHHHHHTTC
T ss_pred EECCCCCCCCCCCCCCCC---HHHcCCCCEEEEcCCCCCCC-H-HHHHHHHCcC
Confidence 99999754311 1 233 34578999999998854333 3 6655555433
No 136
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.18 E-value=6.2e-06 Score=81.53 Aligned_cols=141 Identities=14% Similarity=0.147 Sum_probs=82.9
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhh----hhhh-----hhccCCCCccccccCCHHHHhh
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA----YGQF-----LKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~l~~ll~ 235 (342)
-++|||||.|.||..+|..|+ ..|.+|++||++++.. +..... +... +..............++ +.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~-~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~ 113 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQL-DAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELS 113 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHH-HHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGT
T ss_pred CCEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHH-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHC
Confidence 368999999999999999985 6799999999987532 211110 0000 00000000001113456 4678
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--CCcccccc
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--LGFSSFKH 311 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--~~~~~tPh 311 (342)
+||+|+.++|.+.+.+.-+-++....+++++++++.+- . +....|.+++.. .-..+++..|.+.+ +.+.+.++
T Consensus 114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs-~-~~~~~la~~~~~-~~~~ig~hf~~P~~~~~lvevv~g 188 (463)
T 1zcj_A 114 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS-A-LNVDDIASSTDR-PQLVIGTHFFSPAHVMRLLEVIPS 188 (463)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS-S-SCHHHHHTTSSC-GGGEEEEEECSSTTTCCEEEEEEC
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCC-C-cCHHHHHHHhcC-CcceEEeecCCCcccceeEEEeCC
Confidence 99999999996544333333455567899999997433 3 334466666542 23446777774332 33444444
No 137
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.17 E-value=6.8e-06 Score=80.45 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=74.1
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHH---------
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV--------- 233 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--------- 233 (342)
-+|+++.|||+|.+|..+|..|+ ..|.+|++||+.++. .+.+.. +..+. ....++++
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La-~~G~~V~~~D~~~~k-v~~L~~---------g~~pi---~epgl~~ll~~~~~~g~ 74 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFA-KHGVDVLGVDINQQT-IDKLQN---------GQISI---EEPGLQEVYEEVLSSGK 74 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHH-HHHHHT---------TCCSS---CCTTHHHHHHHHHHTTC
T ss_pred ccCCccEEEeeCHHHHHHHHHHH-HCCCEEEEEECCHHH-HHHHHC---------CCCCc---CCCCHHHHHHhhcccCc
Confidence 47899999999999999999986 569999999998754 333221 11111 11122222
Q ss_pred ------hhcCCEEEEcCCCCcccc--------cccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 019387 234 ------LREADVISLHPVLDKTTY--------HLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 234 ------l~~aDiV~l~~pl~~~t~--------~li~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL 286 (342)
+++||+|++|+|...... .+.. +...+.+++|.++|+.|.-.+=..+.+.+.+
T Consensus 75 l~~ttd~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 75 LKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp EEEESSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred eEEeCchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 357999999999654322 1222 4566779999999999977776677777654
No 138
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.17 E-value=5.2e-06 Score=82.30 Aligned_cols=116 Identities=13% Similarity=0.143 Sum_probs=74.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcC-Cc-EEEEEcCCchh---HHHHHHhhhh----------hhhhccCCCCccccccCCH
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGF-KM-NLIYYDLYQAT---RLEKFVTAYG----------QFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~af-g~-~V~~~d~~~~~---~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l 230 (342)
++|+|||+|.||..+|..|+ .. |. +|++||+.+++ +.+....... .+... ....-.....++
T Consensus 19 mkIaVIGlG~mG~~lA~~la-~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~-~~~~g~l~~ttd- 95 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFA-DAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK-VVKAGKFECTPD- 95 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH-HHHTTCEEEESC-
T ss_pred CEEEEECcCHHHHHHHHHHH-HhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh-hcccCCeEEeCc-
Confidence 58999999999999999986 56 88 99999998761 2222211100 00000 000001112234
Q ss_pred HHHhhcCCEEEEcCCCCccc--------cccc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 019387 231 DEVLREADVISLHPVLDKTT--------YHLI--NKERLATMKKEAILVNCSRGPVIDEVALVE 284 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t--------~~li--~~~~l~~mk~ga~lINvaRG~~vd~~aL~~ 284 (342)
.+.+++||+|++|+|..... ..+. .+.....+++|.++|+.+.-.+=..+.+.+
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 56789999999999965322 2222 245667899999999998777666666665
No 139
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.16 E-value=1.6e-06 Score=82.79 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=69.1
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccC-CCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|+|||.|+||..+|..| ...|.+|.+||++++.. +...+.........+ ..+.......++++++..+|+|++|+|
T Consensus 17 kI~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~ 94 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVL-SKKCREVCVWHMNEEEV-RLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP 94 (366)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTEEEEEEECSCHHHH-HHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCC
T ss_pred eEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCC
Confidence 899999999999999998 46688999999986432 222111000000000 001112234678888999999999999
Q ss_pred CCcccccccCHH---HHhcCCC-CcEEEEcCCCccc
Q 019387 246 LDKTTYHLINKE---RLATMKK-EAILVNCSRGPVI 277 (342)
Q Consensus 246 l~~~t~~li~~~---~l~~mk~-ga~lINvaRG~~v 277 (342)
. .....++... ....+++ |+++|+++.|-..
T Consensus 95 ~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 95 T-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp H-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred h-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 4 4445554331 3345677 8999999877443
No 140
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.14 E-value=2.2e-06 Score=70.91 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=74.3
Q ss_pred ccCCCeEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC
Q 019387 162 LLKGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~L~gktvgIvG~----G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 237 (342)
...-++|+|||. |++|+.+++.| ...|.+|+.+|+..+.. .+...+.+++++....
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L-~~~G~~V~~vnp~~~~i-------------------~G~~~~~s~~el~~~v 70 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDL-LSKGFEVLPVNPNYDEI-------------------EGLKCYRSVRELPKDV 70 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSEE-------------------TTEECBSSGGGSCTTC
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHH-HHCCCEEEEeCCCCCeE-------------------CCeeecCCHHHhCCCC
Confidence 355678999999 99999999998 67789988888764221 1233457889998899
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
|++++++| .+....++.+ ..+ ...++++++.+. . .+++.++.++..+.
T Consensus 71 Dlvii~vp-~~~v~~v~~~-~~~-~g~~~i~~~~~~---~-~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 71 DVIVFVVP-PKVGLQVAKE-AVE-AGFKKLWFQPGA---E-SEEIRRFLEKAGVE 118 (138)
T ss_dssp CEEEECSC-HHHHHHHHHH-HHH-TTCCEEEECTTS---C-CHHHHHHHHHHTCE
T ss_pred CEEEEEeC-HHHHHHHHHH-HHH-cCCCEEEEcCcc---H-HHHHHHHHHHCCCE
Confidence 99999999 4666666643 333 666777777743 2 46677777765555
No 141
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.12 E-value=1.2e-05 Score=79.90 Aligned_cols=118 Identities=13% Similarity=0.143 Sum_probs=73.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCC--------CccccccCCHHHHhhcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~ll~~a 237 (342)
.+|+|||+|.||..+|..|+ ..|.+|++||+.++. .+.....-.. +...+.. .......+++++.++.|
T Consensus 9 ~~I~VIG~G~vG~~lA~~la-~~G~~V~~~d~~~~~-v~~l~~~~~~-i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLA-DIGHDVFCLDVDQAK-IDILNNGGVP-IHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHH-HHHHHTTCCS-SCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred ceEEEECcCHHHHHHHHHHH-hCCCEEEEEECCHHH-HHHHHCCCCC-cCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 58999999999999999985 678999999998653 3322211000 0000000 00122346788889999
Q ss_pred CEEEEcCCCCc---------ccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 019387 238 DVISLHPVLDK---------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (342)
Q Consensus 238 DiV~l~~pl~~---------~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~ 287 (342)
|+|++|+|... ..+..+ +.....+++|+++|+.+.-.+=..+.+.+.+.
T Consensus 86 DvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 86 DVQFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred CEEEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999998632 222222 33456789999999998433333344545444
No 142
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.11 E-value=1.7e-05 Score=75.60 Aligned_cols=99 Identities=17% Similarity=0.224 Sum_probs=69.3
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
.++++||||.|.+|+.+++.|+...+ -+|.+||++++. .+++.+.+. .. .........++++++++||+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~-a~~la~~~~----~~--~g~~~~~~~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLA-TAKLIANLK----EY--SGLTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHH-HHHHHHHHT----TC--TTCEEEECSSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHH-HHHHHHHHH----hc--cCceEEEeCCHHHHHhcCCEEEE
Confidence 36799999999999999987644444 489999998754 333333221 00 01112345789999999999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+|.. ....++.. +.+++|..+++++.
T Consensus 201 aTps~-~~~pvl~~---~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 201 VTADK-AYATIITP---DMLEPGMHLNAVGG 227 (350)
T ss_dssp CCCCS-SEEEEECG---GGCCTTCEEEECSC
T ss_pred eccCC-CCCceecH---HHcCCCCEEEECCC
Confidence 99975 23455554 46889999999985
No 143
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.10 E-value=7.8e-06 Score=76.55 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=71.0
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcC--CchhHHHHHHhhhhhhhhccCCCCccccccC--CHHHHhhcCCEEEE
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRAS--SMDEVLREADVISL 242 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~ll~~aDiV~l 242 (342)
+|+|||.|.||..+|..|+ ..|.+|.+||+ +++. .+...... .... .+.......... ++++.++++|+|++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~-~~g~~V~~~~r~~~~~~-~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~~~~~~~~D~vi~ 77 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLV-DNGNEVRIWGTEFDTEI-LKSISAGR-EHPR-LGVKLNGVEIFWPEQLEKCLENAEVVLL 77 (335)
T ss_dssp EEEEESCCHHHHHHHHHHH-HHCCEEEEECCGGGHHH-HHHHHTTC-CBTT-TTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred EEEEECcCHHHHHHHHHHH-hCCCeEEEEEccCCHHH-HHHHHHhC-cCcc-cCccccceEEecHHhHHHHHhcCCEEEE
Confidence 7999999999999999985 55889999998 6543 22211100 0000 000000011223 67788899999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCc---cc-CHHHHHHHHHc
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGP---VI-DEVALVEHLKQ 288 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~---~v-d~~aL~~aL~~ 288 (342)
|+|.. .+..++. .... ++++.++|+++.|- -. ..+.+.+.+.+
T Consensus 78 ~v~~~-~~~~v~~-~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 78 GVSTD-GVLPVMS-RILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp CSCGG-GHHHHHH-HHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred cCChH-HHHHHHH-HHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 99953 4444442 3345 78899999998774 11 22345566654
No 144
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.09 E-value=2.2e-05 Score=73.65 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=65.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.++++|||.|.+|+..++.|++.++ -+|.+||++ +. +++.+.+.. ..+ ..+... ++++++++||+|++|
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a--~~la~~l~~---~~g---~~~~~~-~~~eav~~aDIVi~a 190 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-AS--PEILERIGR---RCG---VPARMA-APADIAAQADIVVTA 190 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CC--HHHHHHHHH---HHT---SCEEEC-CHHHHHHHCSEEEEC
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HH--HHHHHHHHH---hcC---CeEEEe-CHHHHHhhCCEEEEc
Confidence 6799999999999999998754454 489999998 22 222221110 001 112234 899999999999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
+|.. ..++.. ..+++|++++++|--
T Consensus 191 T~s~---~pvl~~---~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 191 TRST---TPLFAG---QALRAGAFVGAIGSS 215 (313)
T ss_dssp CCCS---SCSSCG---GGCCTTCEEEECCCS
T ss_pred cCCC---CcccCH---HHcCCCcEEEECCCC
Confidence 9863 456654 468999999999754
No 145
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.08 E-value=4.8e-06 Score=79.79 Aligned_cols=107 Identities=10% Similarity=0.102 Sum_probs=67.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCC-------cEEEEEcCCchh----HHHHHHhhh-hhhhhccCCCCccccccCCHHHH
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQAT----RLEKFVTAY-GQFLKANGEQPVTWKRASSMDEV 233 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg-------~~V~~~d~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l 233 (342)
++|+|||.|+||..+|..|++ -| .+|.+||+.++. ..+.....- ..........+.......+++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~-~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT-NAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH-HHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CEEEEECcCHHHHHHHHHHHH-cCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 479999999999999999854 35 789999987651 122111100 00000000001122334678888
Q ss_pred hhcCCEEEEcCCCCcccccccCHHHHh----cCCCCcEEEEcCCCc
Q 019387 234 LREADVISLHPVLDKTTYHLINKERLA----TMKKEAILVNCSRGP 275 (342)
Q Consensus 234 l~~aDiV~l~~pl~~~t~~li~~~~l~----~mk~ga~lINvaRG~ 275 (342)
+++||+|++++|. ...+.++. +... .+++++++|+++-|-
T Consensus 101 ~~~aDvVilav~~-~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 101 INDADLLIFIVPC-QYLESVLA-SIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HTTCSEEEECCCH-HHHHHHHH-HHTC---CCCCTTCEEEECCCSC
T ss_pred HcCCCEEEEcCCH-HHHHHHHH-HHhhhhhccCCCCCEEEEeCCcc
Confidence 8999999999994 44444443 2334 678899999998773
No 146
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.07 E-value=9e-06 Score=72.13 Aligned_cols=93 Identities=22% Similarity=0.233 Sum_probs=60.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
-++|||||.|+||..+|+.|+ ..|.+|.+ +|++++.. +.....+ +. ....+..+.++++|+|+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~-~~g~~V~~v~~r~~~~~-~~l~~~~-------g~-----~~~~~~~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFT-AAQIPAIIANSRGPASL-SSVTDRF-------GA-----SVKAVELKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHH-HTTCCEEEECTTCGGGG-HHHHHHH-------TT-----TEEECCHHHHTTSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCEEEEEECCCHHHH-HHHHHHh-------CC-----CcccChHHHHhcCCEEEEe
Confidence 368999999999999999984 66899998 99987542 2221111 11 1112445567899999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+|. .....++.+ +.. .++.++|+++-|-
T Consensus 89 vp~-~~~~~v~~~--l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 89 VPY-DSIADIVTQ--VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp SCG-GGHHHHHTT--CSC-CTTCEEEECCCCB
T ss_pred CCh-HHHHHHHHH--hhc-cCCCEEEEcCCCC
Confidence 983 222333221 122 3588999998553
No 147
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.06 E-value=3.1e-05 Score=74.23 Aligned_cols=137 Identities=15% Similarity=0.194 Sum_probs=93.0
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCC----chhH---HHHHHhhhhhhhhccCCCCccccccCCHHH
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY----QATR---LEKFVTAYGQFLKANGEQPVTWKRASSMDE 232 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (342)
..+.+.+|.|+|.|..|..+|+.| .+.|. +|+.+|++ .... +..+...|.. ... . .....+|++
T Consensus 188 ~~l~~~kVVv~GAGaAG~~iAkll-~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~---~~~--~--~~~~~~L~e 259 (388)
T 1vl6_A 188 KKIEEVKVVVNGIGAAGYNIVKFL-LDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR---ITN--P--ERLSGDLET 259 (388)
T ss_dssp CCTTTCEEEEECCSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH---TSC--T--TCCCSCHHH
T ss_pred CCCCCcEEEEECCCHHHHHHHHHH-HhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH---hhh--c--cCchhhHHH
Confidence 468899999999999999999997 68899 89999998 3221 2222222221 111 1 113468999
Q ss_pred HhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCC-ceEEEEecCCCCCCCccccc
Q 019387 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNP-MFRVGLDVFEVTELGFSSFK 310 (342)
Q Consensus 233 ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~aL~~g~-i~~aaLDV~~~EP~~~~~tP 310 (342)
.++++|+++-+.. .++|+++.++.|+++++++.+++... +..++.+++ |+ |.+-+---+.++-.|++..|
T Consensus 260 av~~ADVlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~---g~~i~atGr~~~p~Q~NN~~~FP 331 (388)
T 1vl6_A 260 ALEGADFFIGVSR-----GNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA---GAFIVATGRSDHPNQVNNLLAFP 331 (388)
T ss_dssp HHTTCSEEEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT---TCSEEEESCTTSSSBCCGGGTHH
T ss_pred HHccCCEEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh---cCeEEEeCCCCCCCcCCceeEcc
Confidence 9999999987731 39999999999999999999997543 333334443 54 44343222222237888888
Q ss_pred ccc
Q 019387 311 HIS 313 (342)
Q Consensus 311 hia 313 (342)
-+.
T Consensus 332 gi~ 334 (388)
T 1vl6_A 332 GIM 334 (388)
T ss_dssp HHH
T ss_pred hHh
Confidence 763
No 148
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.05 E-value=8e-06 Score=84.94 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=81.3
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHH--H-hhhhhhhhccCCCC--------ccccccCCHHHHh
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF--V-TAYGQFLKANGEQP--------VTWKRASSMDEVL 234 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~--~-~~~~~~~~~~~~~~--------~~~~~~~~l~~ll 234 (342)
++|||||.|.||..+|..++ ..|.+|++||++++...... . ..+... ...+... .......++ +.+
T Consensus 315 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~-~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSA-SKGTPILMKDINEHGIEQGLAEAAKLLVGR-VDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHH-HTTCCEEEECSSHHHHHHHHHHHHHHHHHH-HTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred CEEEEECCChhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 57999999999999999985 56999999999876432110 0 000000 1111110 011223455 568
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCC
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEV 301 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~ 301 (342)
++||+|+.++|.+.+.+.-+-++....++++++++..+.+ +....+.+.+. ..-..+++..|.+
T Consensus 392 ~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~-~~~~~ig~hf~~P 455 (715)
T 1wdk_A 392 GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALK-RPENFVGMHFFNP 455 (715)
T ss_dssp GGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCS-CGGGEEEEECCSS
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhc-CccceEEEEccCC
Confidence 9999999999977665554445566788999999854333 44455666553 2234577777763
No 149
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.02 E-value=2.4e-06 Score=71.18 Aligned_cols=105 Identities=10% Similarity=0.161 Sum_probs=74.0
Q ss_pred CCeEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvgIvG~----G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
-++|+|||. |++|..+++.| ...|.+|+.+|+..... .-.+...+.+++++....|++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L-~~~G~~v~~vnp~~~g~-----------------~i~G~~~~~sl~el~~~~Dlv 74 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYL-LDQGYHVIPVSPKVAGK-----------------TLLGQQGYATLADVPEKVDMV 74 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHH-HHHTCCEEEECSSSTTS-----------------EETTEECCSSTTTCSSCCSEE
T ss_pred CCEEEEECcCCCCCChHHHHHHHH-HHCCCEEEEeCCccccc-----------------ccCCeeccCCHHHcCCCCCEE
Confidence 568999999 89999999997 56788888888765100 001233456788888899999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~a 294 (342)
++++| .+....++.+ ..+ ...++++++.+ . + ++++.+++++..+.-.
T Consensus 75 ii~vp-~~~v~~v~~~-~~~-~g~~~i~i~~~--~-~-~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 75 DVFRN-SEAAWGVAQE-AIA-IGAKTLWLQLG--V-I-NEQAAVLAREAGLSVV 121 (145)
T ss_dssp ECCSC-STHHHHHHHH-HHH-HTCCEEECCTT--C-C-CHHHHHHHHTTTCEEE
T ss_pred EEEeC-HHHHHHHHHH-HHH-cCCCEEEEcCC--h-H-HHHHHHHHHHcCCEEE
Confidence 99999 4666666643 333 55677777753 2 2 6778888887666533
No 150
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.01 E-value=8.8e-06 Score=74.42 Aligned_cols=96 Identities=10% Similarity=0.091 Sum_probs=63.8
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--ccc-ccCCHHHHhhcCCEEEEc
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWK-RASSMDEVLREADVISLH 243 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~l~~ll~~aDiV~l~ 243 (342)
+|+|||.|+||..+|..|+ ..|.+|.+||++++.. +. +...+.... ... ...+ .+.++.+|+|++|
T Consensus 2 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~-~~--------l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~ 70 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALC-KQGHEVQGWLRVPQPY-CS--------VNLVETDGSIFNESLTAND-PDFLATSDLLLVT 70 (291)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCSE-EE--------EEEECTTSCEEEEEEEESC-HHHHHTCSEEEEC
T ss_pred eEEEECcCHHHHHHHHHHH-hCCCCEEEEEcCccce-ee--------EEEEcCCCceeeeeeeecC-ccccCCCCEEEEE
Confidence 7999999999999999984 6689999999876431 11 111111000 000 1223 4677899999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+|.. .+..++ +.....+++++++|++.-|-
T Consensus 71 v~~~-~~~~v~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 71 LKAW-QVSDAV-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp SCGG-GHHHHH-HHHHTTSCTTSCEEEECSSS
T ss_pred ecHH-hHHHHH-HHHHhhCCCCCEEEEecCCC
Confidence 9954 444444 34456678899999986653
No 151
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.99 E-value=7.5e-06 Score=77.21 Aligned_cols=100 Identities=15% Similarity=0.258 Sum_probs=64.5
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
-.+|+|||.|+||..+|..|+ .-|.+|.+|+++++.. +...+.- .-....+.. .......+.++ +..+|+|++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~-~~G~~V~~~~r~~~~~-~~l~~~g-~~~~~~~~~-~~~~~~~~~~~-~~~aDvVil~v 88 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLH-ENGEEVILWARRKEIV-DLINVSH-TSPYVEESK-ITVRATNDLEE-IKKEDILVIAI 88 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSHHHH-HHHHHHS-CBTTBTTCC-CCSEEESCGGG-CCTTEEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHH-hCCCeEEEEeCCHHHH-HHHHHhC-CcccCCCCe-eeEEEeCCHHH-hcCCCEEEEEC
Confidence 358999999999999999985 5689999999986432 2221110 000000000 01223456777 88999999999
Q ss_pred CCCcccccccCHHHHhcCC-CCcEEEEcCCCc
Q 019387 245 VLDKTTYHLINKERLATMK-KEAILVNCSRGP 275 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk-~ga~lINvaRG~ 275 (342)
|. ..++.++. .++ +|.++|+++-|-
T Consensus 89 k~-~~~~~v~~-----~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 89 PV-QYIREHLL-----RLPVKPSMVLNLSKGI 114 (335)
T ss_dssp CG-GGHHHHHT-----TCSSCCSEEEECCCCC
T ss_pred CH-HHHHHHHH-----HhCcCCCEEEEEeCCC
Confidence 94 55544443 333 789999998763
No 152
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.99 E-value=1.4e-05 Score=83.28 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=79.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHH---hhhhhhhhccCCC--------CccccccCCHHHHh
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFV---TAYGQFLKANGEQ--------PVTWKRASSMDEVL 234 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~l~~ll 234 (342)
++|||||.|.||..+|..++ ..|.+|++||++++....... ..+.... ..+.. ........++ +.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~-~~G~~~~~~~~~~~~~i~~~~d~-~~~ 389 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALI-LSNYPVILKEVNEKFLEAGIGRVKANLQSRV-RKGSMSQEKFEKTMSLLKGSLDY-ESF 389 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHHHHHHHHHHHHHHHTT-C----CTTHHHHTTTSEEEESSS-GGG
T ss_pred cEEEEEcCCHhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHhcceEEeCCH-HHH
Confidence 57999999999999999985 569999999998764221100 0000000 11110 0011223456 468
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCC
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEV 301 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~ 301 (342)
++||+|+.++|.+.+.+.-+-++....++++++++..+.+ +....+.+.+.. .-..+++..|.+
T Consensus 390 ~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~P 453 (725)
T 2wtb_A 390 RDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFSP 453 (725)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECSS
T ss_pred CCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCCC
Confidence 8999999999976655544445566778999999654332 344556555532 224567776763
No 153
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.98 E-value=3.5e-06 Score=72.27 Aligned_cols=101 Identities=10% Similarity=0.117 Sum_probs=64.1
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc--ccCCHHHH--hh
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEV--LR 235 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l--l~ 235 (342)
.++.+++|+|+|+|.+|+.+|+.| +.. |.+|+++|++++.. +... ..+....... ....+.++ +.
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L-~~~~g~~V~vid~~~~~~-~~~~--------~~g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDEL-RARYGKISLGIEIREEAA-QQHR--------SEGRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHH-HHHHCSCEEEEESCHHHH-HHHH--------HTTCCEEECCTTCHHHHHTBCSCC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHH-HhccCCeEEEEECCHHHH-HHHH--------HCCCCEEEcCCCCHHHHHhccCCC
Confidence 457788999999999999999997 677 99999999987542 2211 1121111000 01123444 67
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
++|+|++++|..+.+..++ ..++.+.++..+|..+.
T Consensus 105 ~ad~vi~~~~~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCEEEECCSSHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred CCCEEEEeCCChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 8999999998644444333 34566666666665433
No 154
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.98 E-value=1.4e-05 Score=71.63 Aligned_cols=97 Identities=24% Similarity=0.263 Sum_probs=70.9
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV~l~~ 244 (342)
+|||||+|.||+.+++.|. .-|+++ .+||+.... + . .+.++++++ .++|+|++|+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~--~---------------~-----~~~~~~~l~~~~~DvVv~~~ 58 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEH--E---------------K-----MVRGIDEFLQREMDVAVEAA 58 (236)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCC--T---------------T-----EESSHHHHTTSCCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcch--h---------------h-----hcCCHHHHhcCCCCEEEECC
Confidence 7999999999999999874 678887 588876421 0 0 246889998 6999999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCCc
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNPM 291 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~---~aL~~aL~~g~i 291 (342)
|.... -+.....++.|..+|..+-+..-+. +.|.++.++...
T Consensus 59 ~~~~~-----~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~ 103 (236)
T 2dc1_A 59 SQQAV-----KDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGR 103 (236)
T ss_dssp CHHHH-----HHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCC
T ss_pred CHHHH-----HHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCC
Confidence 84221 1223456778999999988877666 567777765333
No 155
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.93 E-value=1e-05 Score=74.84 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=71.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCC-CCccccccCCHHHHh---hcCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVL---READVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ll---~~aDiV~ 241 (342)
.+|+|||.|.||..+|..|+ .-|.+|.+||++++.. +...+. +......+. ...... ..+.+++. +++|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~-~~~~~~-g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLH-QGGNDVTLIDQWPAHI-EAIRKN-GLIADFNGEEVVANLP-IFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHHH-CEEEEETTEEEEECCC-EECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHhC-CEEEEeCCCeeEecce-eecchhhcccCCCCCEEE
Confidence 48999999999999999984 5689999999986532 222111 000000000 000000 01223333 3899999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|+|. ..+..++ +.....++++.++|+++-|- -..+.+.+.+.+.++.
T Consensus 80 ~~v~~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 80 ALTKA-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp ECSCH-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred EEecc-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 99994 3444444 33445678899999997653 2345566666544333
No 156
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.92 E-value=5.3e-05 Score=71.27 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
..++++|||.|.+|+.+++.|++..+ -+|.+||++++. .+++.+.+.. .+ .... ..++++++ ++|+|++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~-a~~la~~~~~----~~---~~~~-~~~~~e~v-~aDvVi~ 193 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKA-AKKFVSYCED----RG---ISAS-VQPAEEAS-RCDVLVT 193 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHH-HHHHHHHHHH----TT---CCEE-ECCHHHHT-SSSEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHH-HHHHHHHHHh----cC---ceEE-ECCHHHHh-CCCEEEE
Confidence 36799999999999999998754344 579999998754 3333332211 11 1123 46899999 9999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
|+|.. ..++.. +.+++|..+++++
T Consensus 194 aTp~~---~pv~~~---~~l~~G~~V~~ig 217 (322)
T 1omo_A 194 TTPSR---KPVVKA---EWVEEGTHINAIG 217 (322)
T ss_dssp CCCCS---SCCBCG---GGCCTTCEEEECS
T ss_pred eeCCC---CceecH---HHcCCCeEEEECC
Confidence 99953 355553 4688999999995
No 157
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.90 E-value=4.4e-05 Score=70.08 Aligned_cols=106 Identities=16% Similarity=0.041 Sum_probs=72.3
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
|+++.|+|.|.+|++++..| ...|.+|.+++|.+++. +... .+ +.. . .+++++ .++|+|+.++
T Consensus 118 ~k~vlvlGaGGaaraia~~L-~~~G~~v~V~nRt~~ka-~~la-~~-------~~~---~---~~~~~l-~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGAGGSAKALACEL-KKQGLQVSVLNRSSRGL-DFFQ-RL-------GCD---C---FMEPPK-SAFDLIINAT 180 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCTTH-HHHH-HH-------TCE---E---ESSCCS-SCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH-HC-------CCe---E---ecHHHh-ccCCEEEEcc
Confidence 88999999999999999998 57889999999987643 2211 11 100 1 122222 2899999999
Q ss_pred CCCcccccccCHHHHh-cCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 245 VLDKTTYHLINKERLA-TMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 245 pl~~~t~~li~~~~l~-~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
|..-.....++.+.+. .++++.+++|+...+ .+.-|.+|-+.|
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G 224 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELK 224 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTT
T ss_pred cCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCc
Confidence 9764433356666333 677899999999887 455344454444
No 158
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.90 E-value=5.6e-06 Score=75.99 Aligned_cols=87 Identities=14% Similarity=0.208 Sum_probs=54.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|||||+|+||+.+|+.|+ .. .+| .+||++++.. +...+.+ +. ...+++++++++|+|++|+
T Consensus 3 m~I~iIG~G~mG~~la~~l~-~~-~~v~~v~~~~~~~~-~~~~~~~-------g~------~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLK-DR-YEIGYILSRSIDRA-RNLAEVY-------GG------KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC------CCCEECSSHHHH-HHHHHHT-------CC------CCCSSCCCCC---CEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHH-Hc-CcEEEEEeCCHHHH-HHHHHHc-------CC------ccCCHHHHHhcCCEEEEeC
Confidence 37999999999999999874 44 788 4899886542 2221111 11 2346677788899999999
Q ss_pred CCCcccccccCHHHHhcC-CCCcEEEEcCCC
Q 019387 245 VLDKTTYHLINKERLATM-KKEAILVNCSRG 274 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~m-k~ga~lINvaRG 274 (342)
|... . .+.+..+ ++|.++||++-+
T Consensus 67 ~~~~-~-----~~v~~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 67 PDRY-I-----KTVANHLNLGDAVLVHCSGF 91 (276)
T ss_dssp CTTT-H-----HHHHTTTCCSSCCEEECCSS
T ss_pred ChHH-H-----HHHHHHhccCCCEEEECCCC
Confidence 9542 2 3344444 688999999854
No 159
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.87 E-value=1.1e-05 Score=77.33 Aligned_cols=115 Identities=18% Similarity=0.090 Sum_probs=72.3
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
+=++++|+|+|.|.||+.+|+.|+ .. .+|.++|++++.. +.+...+ ...........+++++++++|+|+
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~-~~-~~V~V~~R~~~~a-~~la~~~-------~~~~~d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLK-DE-FDVYIGDVNNENL-EKVKEFA-------TPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT-TT-SEEEEEESCHHHH-HHHTTTS-------EEEECCTTCHHHHHHHHTTCSCEE
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHH-cC-CeEEEEECCHHHH-HHHHhhC-------CeEEEecCCHHHHHHHHhCCCEEE
Confidence 345889999999999999999985 44 8999999987542 2211110 000011112357889999999999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
.|+|..... .-....++.|..+++++-- .-+..+|.+..++..+.
T Consensus 83 n~~P~~~~~-----~v~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 83 GALPGFLGF-----KSIKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp ECCCHHHHH-----HHHHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred ECCChhhhH-----HHHHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 998843221 1223446789999998752 23344666666554443
No 160
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.80 E-value=0.00013 Score=60.73 Aligned_cols=104 Identities=17% Similarity=0.207 Sum_probs=61.5
Q ss_pred cccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhh-ccCCCCccccccCC---HHHH-
Q 019387 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGEQPVTWKRASS---MDEV- 233 (342)
Q Consensus 159 ~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---l~~l- 233 (342)
+.....+++|.|+|+|.+|+.+|+.| +..|.+|+++|++++.. +. +. ..+...... ...+ +.+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L-~~~g~~V~vid~~~~~~-~~--------~~~~~g~~~~~~-d~~~~~~l~~~~ 81 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLA-SSSGHSVVVVDKNEYAF-HR--------LNSEFSGFTVVG-DAAEFETLKECG 81 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGG-GG--------SCTTCCSEEEES-CTTSHHHHHTTT
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HH--------HHhcCCCcEEEe-cCCCHHHHHHcC
Confidence 34566789999999999999999997 67899999999887532 11 11 111110000 1112 3333
Q ss_pred hhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 234 l~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+.++|+|++++|....+. .-......+.+...+|-..++.
T Consensus 82 ~~~ad~Vi~~~~~~~~~~--~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 82 MEKADMVFAFTNDDSTNF--FISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GGGCSEEEECSSCHHHHH--HHHHHHHHTSCCSEEEEECSSG
T ss_pred cccCCEEEEEeCCcHHHH--HHHHHHHHHCCCCeEEEEECCH
Confidence 678999999998533222 2223344445555666665555
No 161
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=97.79 E-value=1.5e-05 Score=71.59 Aligned_cols=70 Identities=10% Similarity=0.142 Sum_probs=54.3
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
..+|||||+|.||.++|+.| +..|.+|.+|++. ++ +.+|| ++|+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L-~~~G~~V~~~~~~--------------------------------~~-~~~aD--ilav 49 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKL-DSVGHYVTVLHAP--------------------------------ED-IRDFE--LVVI 49 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHH-HHTTCEEEECSSG--------------------------------GG-GGGCS--EEEE
T ss_pred CcEEEEEeeCHHHHHHHHHH-HHCCCEEEEecCH--------------------------------HH-hccCC--EEEE
Confidence 35899999999999999998 5679999998862 11 46799 8888
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
|.. ....++ .+....+++|+++++++
T Consensus 50 P~~-ai~~vl-~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 50 DAH-GVEGYV-EKLSAFARRGQMFLHTS 75 (232)
T ss_dssp CSS-CHHHHH-HHHHTTCCTTCEEEECC
T ss_pred cHH-HHHHHH-HHHHHhcCCCCEEEEEC
Confidence 864 555555 44556789999999975
No 162
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.79 E-value=2.8e-05 Score=72.09 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=67.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcC----C-cEEEEEcCCchhHHHHHHhhhhhhhhc-cCC-CCccccccCCHHHHhhcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGF----K-MNLIYYDLYQATRLEKFVTAYGQFLKA-NGE-QPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~af----g-~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~ll~~aD 238 (342)
.+|+|||.|+||..+|..|+++. | .+|.+|++ + .+.+.+.+..+..... .+. ........++. +.+..+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~-~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-G-AHLEAIRAAGGLRVVTPSRDFLARPTCVTDNP-AEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-H-HHHHHHHHHTSEEEECSSCEEEECCSEEESCH-HHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-H-HHHHHHHhcCCeEEEeCCCCeEEecceEecCc-cccCCCC
Confidence 47999999999999999985431 7 89999998 4 3333322201100000 000 00001111233 4568899
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCH-HHHHHHHHc
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE-VALVEHLKQ 288 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~-~aL~~aL~~ 288 (342)
+|++|+|.. .+...+ +.....++++.++|++.-| ++. +.|.+.+.+
T Consensus 86 ~vil~vk~~-~~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~ 132 (317)
T 2qyt_A 86 YILFCTKDY-DMERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPD 132 (317)
T ss_dssp EEEECCSSS-CHHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCT
T ss_pred EEEEecCcc-cHHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCC
Confidence 999999964 334433 2333456778999998766 343 455555543
No 163
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.76 E-value=9.3e-05 Score=69.53 Aligned_cols=143 Identities=10% Similarity=0.062 Sum_probs=94.2
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHH---HhhhhhhhhccCCC---C-----ccccccCCHHHH
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQ---P-----VTWKRASSMDEV 233 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~---~-----~~~~~~~~l~~l 233 (342)
-++|+|||.|.||..+|..++ ..|.+|+.||+.++...... ...+..+....... . .......++++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 468999999999999999985 67999999999876422111 11111111111111 0 012245789999
Q ss_pred hhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--CCcccccc
Q 019387 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--LGFSSFKH 311 (342)
Q Consensus 234 l~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--~~~~~tPh 311 (342)
+++||+|+=++|-+-+.+.-+-++.=+.++++++|-..+.+ +....|.+++.. .=+..++=.|.+-| |-+-+.|+
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~~~m~LVEiv~g 161 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPPYYIPLVELVPH 161 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSSTTTCCEEEEEEC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCccccchHHhcCC
Confidence 99999999999988787776767766778999988766554 555777777643 44556665555544 44444444
No 164
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.74 E-value=2.9e-05 Score=63.73 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=59.2
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCC---HHHH-hhcCCEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~l-l~~aDiV 240 (342)
..++.|+|+|.+|+.+|+.| +..|.+|+++|+.++.. +... ..+...... ...+ ++++ +.++|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~-~~~~--------~~g~~~i~g-d~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKL-LASDIPLVVIETSRTRV-DELR--------ERGVRAVLG-NAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHH-HHHH--------HTTCEEEES-CTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HHHH--------HcCCCEEEC-CCCCHHHHHhcCcccCCEE
Confidence 45799999999999999998 68899999999987542 2211 111111100 1112 2222 4689999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEc
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINv 271 (342)
++++|....+..++ ..++.+.++..+|-.
T Consensus 76 i~~~~~~~~n~~~~--~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 76 ILTIPNGYEAGEIV--ASARAKNPDIEIIAR 104 (140)
T ss_dssp EECCSCHHHHHHHH--HHHHHHCSSSEEEEE
T ss_pred EEECCChHHHHHHH--HHHHHHCCCCeEEEE
Confidence 99999655554332 345556566666543
No 165
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.73 E-value=9e-05 Score=71.95 Aligned_cols=100 Identities=19% Similarity=0.266 Sum_probs=69.7
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh--HHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.-|.||+|+|||||+=|++-|..| +.-|.+|.+--+.... ....+.. ...+ ++ ...+.+|+.++||
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNL-RDSGv~V~Vglr~~s~~e~~~S~~~-----A~~~-----Gf-~v~~~~eA~~~AD 100 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNM-RDSGLDISYALRKEAIAEKRASWRK-----ATEN-----GF-KVGTYEELIPQAD 100 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHH-HHTTCEEEEEECHHHHHTTCHHHHH-----HHHT-----TC-EEEEHHHHGGGCS
T ss_pred HHHcCCEEEEeCCChHhHHHHhHH-HhcCCcEEEEeCCCCcccccchHHH-----HHHC-----CC-EecCHHHHHHhCC
Confidence 458999999999999999999998 7889999875442210 0000100 0111 12 2358999999999
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+|.+.+|...+ ..+. ++....||+|+.|. .+.|=
T Consensus 101 vV~~L~PD~~q-~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 101 LVINLTPDKQH-SDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp EEEECSCGGGH-HHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred EEEEeCChhhH-HHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 99999996433 3344 46889999999887 56664
No 166
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.71 E-value=0.0001 Score=70.76 Aligned_cols=165 Identities=14% Similarity=0.153 Sum_probs=106.4
Q ss_pred CeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcC
Q 019387 109 GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGF 188 (342)
Q Consensus 109 gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~af 188 (342)
.|++.|+ + -..+|=-+++-++..+| ..|..+...+|.|+|-|..|..+|+.+ .++
T Consensus 156 ~ipvf~D-D--iqGTa~V~lAall~al~---------------------l~g~~l~d~kVVi~GAGaAG~~iA~ll-~~~ 210 (398)
T 2a9f_A 156 HIPVFHD-D--QHGTAIVVLAAIFNSLK---------------------LLKKSLDEVSIVVNGGGSAGLSITRKL-LAA 210 (398)
T ss_dssp SSCEEEH-H--HHHHHHHHHHHHHHHHH---------------------TTTCCTTSCEEEEECCSHHHHHHHHHH-HHH
T ss_pred Ccceecc-h--hhhHHHHHHHHHHHHHH---------------------HhCCCCCccEEEEECCCHHHHHHHHHH-HHc
Confidence 5888883 2 23344455555565554 124578899999999999999999997 688
Q ss_pred Cc-EEEEEcCCch------hHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 189 KM-NLIYYDLYQA------TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 189 g~-~V~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
|. +|+.+|++.- ..+..+...|... .. . .....+|+|+++++|+++=+- +.++++++.++.
T Consensus 211 Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~---~~--~--~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~ 278 (398)
T 2a9f_A 211 GATKVTVVDKFGIINEQEAAQLAPHHLDIAKV---TN--R--EFKSGTLEDALEGADIFIGVS-----APGVLKAEWISK 278 (398)
T ss_dssp TCCEEEEEETTEECCTTCCCSCCC---CHHHH---HS--C--TTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHT
T ss_pred CCCeEEEEECCCcccCCccccchHHHHHHhhc---cC--c--ccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHh
Confidence 99 9999998741 1112222222110 00 0 112357999999999987662 369999999999
Q ss_pred CCCCcEEEEcCCCcc-cCHHHHHHHHHcCC-ceEEEEecCCCCCCCcccccccc
Q 019387 262 MKKEAILVNCSRGPV-IDEVALVEHLKQNP-MFRVGLDVFEVTELGFSSFKHIS 313 (342)
Q Consensus 262 mk~ga~lINvaRG~~-vd~~aL~~aL~~g~-i~~aaLDV~~~EP~~~~~tPhia 313 (342)
|+++++++.+|.... +..++.++ .|+ |.+-+---+.++-.|+++.|-+.
T Consensus 279 Ma~~pIIfalsNPt~E~~pe~a~~---~g~~i~atGrs~~p~Q~NN~~~FPgi~ 329 (398)
T 2a9f_A 279 MAARPVIFAMANPIPEIYPDEALE---AGAYIVGTGRSDFPNQINNVLAFPGIF 329 (398)
T ss_dssp SCSSCEEEECCSSSCSSCHHHHHT---TTCSEEEESCTTSSSBCCGGGTHHHHH
T ss_pred hCCCCEEEECCCCCccCCHHHHHH---hCCeEEEeCCCCCCCcCCceeEcchHH
Confidence 999999999998653 23333333 355 44444222333337888877663
No 167
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.70 E-value=0.00015 Score=58.43 Aligned_cols=95 Identities=12% Similarity=0.197 Sum_probs=57.5
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCH---HHH-hhcCCEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV-LREADVI 240 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~l-l~~aDiV 240 (342)
+++|+|+|+|.+|+.+|+.| ...|.+|.++|++++.. +.....+ +.... .....+. .+. +.++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L-~~~g~~v~~~d~~~~~~-~~~~~~~-------~~~~~-~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSL-SEKGHDIVLIDIDKDIC-KKASAEI-------DALVI-NGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHC-------SSEEE-ESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHHhc-------CcEEE-EcCCCCHHHHHHcCcccCCEE
Confidence 46899999999999999998 56799999999876532 2221111 11000 0011122 222 5789999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEc
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINv 271 (342)
++++|....+ ..-....+.++++.+++-+
T Consensus 74 i~~~~~~~~~--~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 74 IAVTGKEEVN--LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EECCSCHHHH--HHHHHHHHHTTCCCEEEEC
T ss_pred EEeeCCchHH--HHHHHHHHHcCCCEEEEEe
Confidence 9999854322 2223345567777666544
No 168
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.66 E-value=4.7e-05 Score=71.79 Aligned_cols=103 Identities=14% Similarity=0.120 Sum_probs=64.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-cCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
..+|+|||.|.||..+|..|+ .-|.+|.+|++. ...+...+ .+..... .+..........++++ +..+|+|++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~-~~g~~V~~~~r~--~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLA-LAGEAINVLARG--ATLQALQT-AGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHH-HTTCCEEEECCH--HHHHHHHH-TCEEEEETTEEEEECCEEESCHHH-HCCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCEEEEEECh--HHHHHHHH-CCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEe
Confidence 358999999999999999985 568899999984 22222211 0000000 0000111112346666 5889999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
+|. .++...+. ..-..+++++++|.+.-|
T Consensus 78 vk~-~~~~~~~~-~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 78 VKA-PALESVAA-GIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp CCH-HHHHHHHG-GGSSSCCTTCEEEECCSS
T ss_pred CCc-hhHHHHHH-HHHhhCCCCCEEEEECCC
Confidence 995 44444442 233456789999999888
No 169
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.65 E-value=0.00013 Score=67.40 Aligned_cols=114 Identities=18% Similarity=0.144 Sum_probs=73.1
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|.++. .+...+.+.. .+ .. ...+++++..++|+
T Consensus 122 ~~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~-a~~la~~~~~----~~--~~---~~~~~~~l~~~aDi 190 (281)
T 3o8q_A 122 VLLKGATILLIGAGGAARGVLKPL-LDQQPASITVTNRTFAK-AEQLAELVAA----YG--EV---KAQAFEQLKQSYDV 190 (281)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HTTCCSEEEEEESSHHH-HHHHHHHHGG----GS--CE---EEEEGGGCCSCEEE
T ss_pred CCccCCEEEEECchHHHHHHHHHH-HhcCCCeEEEEECCHHH-HHHHHHHhhc----cC--Ce---eEeeHHHhcCCCCE
Confidence 357899999999999999999998 57896 99999998754 2222222211 00 01 11244455578999
Q ss_pred EEEcCCCCcccc-cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 240 ISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 240 V~l~~pl~~~t~-~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
|+.++|..-... -.++. +.++++.+++++.-.+ ..+.-|.+|-+.|
T Consensus 191 IInaTp~gm~~~~~~l~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 237 (281)
T 3o8q_A 191 IINSTSASLDGELPAIDP---VIFSSRSVCYDMMYGK-GYTVFNQWARQHG 237 (281)
T ss_dssp EEECSCCCC----CSCCG---GGEEEEEEEEESCCCS-SCCHHHHHHHHTT
T ss_pred EEEcCcCCCCCCCCCCCH---HHhCcCCEEEEecCCC-ccCHHHHHHHHCC
Confidence 999999754321 13443 4567899999998765 3344343444444
No 170
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.64 E-value=5.4e-05 Score=59.16 Aligned_cols=93 Identities=16% Similarity=0.104 Sum_probs=58.9
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCCEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVI 240 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aDiV 240 (342)
.+++|+|+|.|.||+.+++.| ...| .+|.+++++++.. +... ..+.... ......++++++.++|+|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l-~~~g~~~v~~~~r~~~~~-~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALL-KTSSNYSVTVADHDLAAL-AVLN--------RMGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHH-HHCSSEEEEEEESCHHHH-HHHH--------TTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECCCHHHHHHHHHH-HhCCCceEEEEeCCHHHH-HHHH--------hCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 367999999999999999997 5778 8999999987542 2111 0011100 111224567788899999
Q ss_pred EEcCCCCcccccccCHHHHhc-CCCCcEEEEcC
Q 019387 241 SLHPVLDKTTYHLINKERLAT-MKKEAILVNCS 272 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~-mk~ga~lINva 272 (342)
+.+.|... + ...... .+.|...++.+
T Consensus 74 i~~~~~~~-~-----~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 74 ISAAPFFL-T-----PIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECSCGGG-H-----HHHHHHHHHTTCEEECCC
T ss_pred EECCCchh-h-----HHHHHHHHHhCCCEEEec
Confidence 99997421 1 222222 24567777764
No 171
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.62 E-value=0.0001 Score=68.97 Aligned_cols=116 Identities=18% Similarity=0.253 Sum_probs=68.0
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-cCCCCccccccCCHHHHhhcCCEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
...++|+|||.|.||..+|..|+ .-|.+|.+| ++++. .+...+. +..... ....+.......++++ +..+|+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~~~~-~~~i~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-ARPQH-VQAIEAT-GLRLETQSFDEQVKVSASSDPSA-VQGADLVL 91 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CCHHH-HHHHHHH-CEEEECSSCEEEECCEEESCGGG-GTTCSEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-EcHhH-HHHHHhC-CeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEE
Confidence 34679999999999999999985 568999999 66532 2222111 000000 0000111112245554 58899999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL 286 (342)
+++|.. +++..+ +..-..+++++++|.+.-|= -.++.+.+.+
T Consensus 92 lavk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~ 133 (318)
T 3hwr_A 92 FCVKST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLL 133 (318)
T ss_dssp ECCCGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHC
T ss_pred EEcccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHc
Confidence 999953 444444 23334678899999987763 2224455555
No 172
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.62 E-value=0.00076 Score=62.23 Aligned_cols=120 Identities=17% Similarity=0.183 Sum_probs=77.3
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|+++.|+|.|.+|+.++..| ...|+ +|.+++|..++. +...+.+.... ...........++++.+.++|+|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~~~~---~~~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYAL-VTHGVQKLQVADLDTSRA-QALADVINNAV---GREAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSSHHHH-HHHHHHHHHHH---TSCCEEEECSTTHHHHHHHSSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEECCHHHH-HHHHHHHHhhc---CCceEEEcCHHHHHHHHhcCCEE
Confidence 57899999999999999999998 57898 799999987542 22222211100 00011111234788899999999
Q ss_pred EEcCCCCccc--ccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 019387 241 SLHPVLDKTT--YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 241 ~l~~pl~~~t--~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~ 290 (342)
+.++|..-.. .-.++ .+.++++.+++++.-.+. .+.=|.+|-+.|.
T Consensus 199 InaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P~-~T~ll~~A~~~G~ 246 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMPI-ETELLKAARALGC 246 (283)
T ss_dssp EECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSSS-SCHHHHHHHHHTC
T ss_pred EECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCCC-CCHHHHHHHHCcC
Confidence 9999964221 11233 345778999999877653 3444555555553
No 173
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.61 E-value=0.0003 Score=65.99 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=74.9
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch--hHHHHHHhhhhhhhhccCCCCcccccc---CCHHHHh
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRA---SSMDEVL 234 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~ll 234 (342)
..+.||++.|+|.|.+|++++..| ...|+ +|.+++|..+ .+.++..+.+.. ..+ ........ .++.+.+
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L-~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~---~~~-~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQA-ALDGVKEISIFNRKDDFYANAEKTVEKINS---KTD-CKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTTHHHHHHHHHHHHH---HSS-CEEEEEETTCHHHHHHHH
T ss_pred CCccCCEEEEECCChHHHHHHHHH-HHCCCCEEEEEECCCchHHHHHHHHHHhhh---hcC-CceEEeccchHHHHHhhh
Confidence 458899999999999999999998 57899 8999999831 222222222111 001 00111112 2356778
Q ss_pred hcCCEEEEcCCCCc--cc-ccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 235 READVISLHPVLDK--TT-YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 235 ~~aDiV~l~~pl~~--~t-~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
.++|+|+.+.|..= .. ...+. ....++++.+++++.-.+. .+.=|.+|-+.|
T Consensus 225 ~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G 279 (315)
T 3tnl_A 225 AESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT-KTRLLEIAEEQG 279 (315)
T ss_dssp HTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred cCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 89999999999642 11 11231 2345688999999987664 344344554544
No 174
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.60 E-value=0.00014 Score=68.00 Aligned_cols=120 Identities=16% Similarity=0.114 Sum_probs=74.0
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc--cCCCCc-cccccCCHHHHhhcCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA--NGEQPV-TWKRASSMDEVLREADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~~ll~~aDiV~l 242 (342)
.+|+|||.|.||..+|..|+ .-|.+|.++++.......+ .+..... .+.... ......+.+++...+|+|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~~~i~~----~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA-KTGHCVSVVSRSDYETVKA----KGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HTTCEEEEECSTTHHHHHH----HCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEeCChHHHHHh----CCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 58999999999999999985 5689999999875321111 0000000 011000 11123566776668999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~ 293 (342)
++|.. ++...+ +..-..++++..+|.+.-|= -.++.|.+.+...++.+
T Consensus 78 avK~~-~~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 78 CIKVV-EGADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp CCCCC-TTCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEEE
T ss_pred ecCCC-ChHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEEE
Confidence 99954 344433 33345677889999987663 23466777775545443
No 175
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.59 E-value=0.00014 Score=66.63 Aligned_cols=114 Identities=14% Similarity=0.117 Sum_probs=70.2
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV 240 (342)
.+.|++++|+|.|.+|+++|..| ...|.+|.+++|+.++ .+...+.+.. .+ ... ..+++++. .++|+|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L-~~~G~~v~v~~R~~~~-a~~l~~~~~~----~~--~~~---~~~~~~~~~~~~Div 184 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPL-LQAQQNIVLANRTFSK-TKELAERFQP----YG--NIQ---AVSMDSIPLQTYDLV 184 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHH-HHTTCEEEEEESSHHH-HHHHHHHHGG----GS--CEE---EEEGGGCCCSCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEECCHHH-HHHHHHHccc----cC--CeE---EeeHHHhccCCCCEE
Confidence 46799999999999999999998 4778999999998753 2222222211 00 000 12233332 389999
Q ss_pred EEcCCCCccccc-ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 241 SLHPVLDKTTYH-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~~pl~~~t~~-li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
+.++|......- -++.+. ++++.+++|+.-.+..+..-+.++-+.|
T Consensus 185 In~t~~~~~~~~~~i~~~~---l~~~~~v~D~~y~p~~~t~ll~~a~~~G 231 (272)
T 1p77_A 185 INATSAGLSGGTASVDAEI---LKLGSAFYDMQYAKGTDTPFIALCKSLG 231 (272)
T ss_dssp EECCCC-------CCCHHH---HHHCSCEEESCCCTTSCCHHHHHHHHTT
T ss_pred EECCCCCCCCCCCCCCHHH---cCCCCEEEEeeCCCCcCCHHHHHHHHcC
Confidence 999997543110 134333 3578899999887655355444444444
No 176
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.59 E-value=0.00041 Score=63.37 Aligned_cols=113 Identities=15% Similarity=0.100 Sum_probs=70.4
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV 240 (342)
.+.|+++.|+|.|.+|+.+|+.| ...|.+|++++++.+. .+...+.+.. .+ ... ..+++++. .++|+|
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L-~~~G~~V~v~~R~~~~-~~~la~~~~~----~~--~~~---~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPL-LSLDCAVTITNRTVSR-AEELAKLFAH----TG--SIQ---ALSMDELEGHEFDLI 184 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHH-HHHHHHHTGG----GS--SEE---ECCSGGGTTCCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHcCCEEEEEECCHHH-HHHHHHHhhc----cC--Cee---EecHHHhccCCCCEE
Confidence 46799999999999999999998 5788999999998653 2222222211 00 010 11223333 589999
Q ss_pred EEcCCCCcccc-cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~~pl~~~t~-~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
+.++|...... .-+.. ..+++|.+++|+.-.+... .-+.++-+.|
T Consensus 185 Vn~t~~~~~~~~~~i~~---~~l~~~~~v~D~~y~p~~t-~~~~~a~~~G 230 (271)
T 1nyt_A 185 INATSSGISGDIPAIPS---SLIHPGIYCYDMFYQKGKT-PFLAWCEQRG 230 (271)
T ss_dssp EECCSCGGGTCCCCCCG---GGCCTTCEEEESCCCSSCC-HHHHHHHHTT
T ss_pred EECCCCCCCCCCCCCCH---HHcCCCCEEEEeccCCcCC-HHHHHHHHcC
Confidence 99998654311 01333 2357899999998865333 3333444444
No 177
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.57 E-value=0.00032 Score=64.97 Aligned_cols=168 Identities=18% Similarity=0.173 Sum_probs=104.8
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhC-----CCceEEEecCC--CCccHHH-HHHhhccCCceEEEccccCCccCh
Q 019387 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETL-FAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~v~~~~~~~~~~~~~e~~~~~~-----~~~d~vi~~~~--~~~~~e~-l~~l~~l~~k~i~~~~~G~d~id~ 102 (342)
+.-++.|.+.+....++ ..+++|+.+.+. .+.++|+++.+ ..++++. ++...- .--+|.+--
T Consensus 76 k~c~~vGi~s~~~~lp~-~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p---------~KDVDG~hp 145 (303)
T 4b4u_A 76 NACRRVGMDSLKIELPQ-ETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISL---------AKDVDGVTC 145 (303)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCG---------GGCTTCCCH
T ss_pred HHHHHcCCeEEEEecCc-cCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCc---------ccccCccCc
Confidence 34456777776655443 357888877653 25789999854 3455443 333221 113343321
Q ss_pred hHHHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHH-HHHHH
Q 019387 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAYA 181 (342)
Q Consensus 103 ~~~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~I-G~~vA 181 (342)
... |-...+.++ ....++.-++ .++++ .+.++.||++.|||-++| |+++|
T Consensus 146 ~N~---G~L~~g~~~-~~PcTp~gv~----~lL~~---------------------~~i~l~Gk~vvViGRS~iVGkPla 196 (303)
T 4b4u_A 146 LGF---GRMAMGEAA-YGSATPAGIM----TILKE---------------------NNIEIAGKHAVVVGRSAILGKPMA 196 (303)
T ss_dssp HHH---HHHHTTCCC-CCCHHHHHHH----HHHHH---------------------TTCCCTTCEEEEECCCTTTHHHHH
T ss_pred chH---HHhcCCCCc-ccCccHHHHH----HHHHH---------------------HCCCCCCCEEEEEeccccccchHH
Confidence 111 111222333 2333443222 22221 135799999999998875 99999
Q ss_pred HHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 182 ~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
.+| ..-++.|+....+ ..+|.+..++||+|+.++.. .++|..+ +
T Consensus 197 ~LL-~~~~ATVTi~Hs~----------------------------T~dl~~~~~~ADIvV~A~G~----p~~i~~d---~ 240 (303)
T 4b4u_A 197 MML-LQANATVTICHSR----------------------------TQNLPELVKQADIIVGAVGK----AELIQKD---W 240 (303)
T ss_dssp HHH-HHTTCEEEEECTT----------------------------CSSHHHHHHTCSEEEECSCS----TTCBCGG---G
T ss_pred HHH-HhcCCEEEEecCC----------------------------CCCHHHHhhcCCeEEeccCC----CCccccc---c
Confidence 987 5779999877432 24789999999999999863 4688876 4
Q ss_pred CCCCcEEEEcCC
Q 019387 262 MKKEAILVNCSR 273 (342)
Q Consensus 262 mk~ga~lINvaR 273 (342)
.|+|+++||+|-
T Consensus 241 vk~GavVIDVGi 252 (303)
T 4b4u_A 241 IKQGAVVVDAGF 252 (303)
T ss_dssp SCTTCEEEECCC
T ss_pred ccCCCEEEEece
Confidence 689999999984
No 178
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.53 E-value=9.9e-05 Score=59.67 Aligned_cols=100 Identities=12% Similarity=0.207 Sum_probs=58.5
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCC---HHHH-hhcCC
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREAD 238 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~l-l~~aD 238 (342)
+.+++|+|+|.|.+|+.+++.| ...|.+|+++|+.++.. +.. ...+.... .....+ ++++ +.++|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l-~~~g~~v~~~d~~~~~~-~~~--------~~~~~~~~-~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKEL-HRMGHEVLAVDINEEKV-NAY--------ASYATHAV-IANATEENELLSLGIRNFE 72 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHH-HHTTCCCEEEESCHHHH-HTT--------TTTCSEEE-ECCTTCHHHHHTTTGGGCS
T ss_pred CcCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH--------HHhCCEEE-EeCCCCHHHHHhcCCCCCC
Confidence 4578899999999999999997 57899999999876432 111 11111100 001122 3333 57899
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+|+.++|...++ .+.-....+.+.+. .+|-...+.
T Consensus 73 ~vi~~~~~~~~~-~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 73 YVIVAIGANIQA-STLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp EEEECCCSCHHH-HHHHHHHHHHTTCS-EEEEECCSH
T ss_pred EEEECCCCchHH-HHHHHHHHHHcCCC-eEEEEeCCH
Confidence 999999864221 22223344556666 555544443
No 179
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.51 E-value=0.00021 Score=69.88 Aligned_cols=139 Identities=18% Similarity=0.155 Sum_probs=90.2
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc---EEEEEc----CC----chhH---HHHHHhhhhhhhhccCCCCccccc
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYD----LY----QATR---LEKFVTAYGQFLKANGEQPVTWKR 226 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~---~V~~~d----~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 226 (342)
..+.++++.|+|.|..|+.+++.| ...|+ +|+++| +. .... ...+...+. .. . .. ...
T Consensus 182 ~~l~~~rvlvlGAGgAg~aia~~L-~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a---~~-~--~~-~~~ 253 (439)
T 2dvm_A 182 KKISEITLALFGAGAAGFATLRIL-TEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLL---KK-T--NG-ENI 253 (439)
T ss_dssp CCTTTCCEEEECCSHHHHHHHHHH-HHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHH---TT-S--CT-TCC
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHh---hc-c--cc-ccc
Confidence 467899999999999999999997 57898 799999 66 2111 111101110 00 0 00 001
Q ss_pred cCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE-EEEecCCCCCCC
Q 019387 227 ASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR-VGLDVFEVTELG 305 (342)
Q Consensus 227 ~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~-aaLDV~~~EP~~ 305 (342)
..++.+.+.++|+|+.+.|.. .+++.++.++.|+++.++++++.. ..|.-+.+|.+.|.-.- -|+..+...-.|
T Consensus 254 ~~~L~e~l~~aDVlInaT~~~---~G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~~ivatG~~ml~~Q~nn 328 (439)
T 2dvm_A 254 EGGPQEALKDADVLISFTRPG---PGVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGARIVATGRSDYPNQINN 328 (439)
T ss_dssp CSSHHHHHTTCSEEEECSCCC---SSSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTCSEECBSCSSSSSBCCG
T ss_pred cccHHHHhccCCEEEEcCCCc---cCCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCCeEEcCCCchhHHHHHH
Confidence 357899999999999998852 266777788999999999999543 34555555555554222 244444443367
Q ss_pred ccccccc
Q 019387 306 FSSFKHI 312 (342)
Q Consensus 306 ~~~tPhi 312 (342)
.+..|-+
T Consensus 329 ~~~FPGi 335 (439)
T 2dvm_A 329 LLGFPGI 335 (439)
T ss_dssp GGTHHHH
T ss_pred HhcccCc
Confidence 7777765
No 180
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.50 E-value=0.00038 Score=64.77 Aligned_cols=120 Identities=13% Similarity=0.147 Sum_probs=72.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-cCCCCc-cccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPV-TWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~~ll~~aDiV~l~ 243 (342)
++|+|||.|+||..+|..|+ .-|.+|.+|++... +... ..+..... .+.... ......+.++ +..+|+|+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~---~~i~-~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ-RSGEDVHFLLRRDY---EAIA-GNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH-HTSCCEEEECSTTH---HHHH-HTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEEcCcH---HHHH-hCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEe
Confidence 57999999999999999985 56889999998752 2211 11100000 010000 1112245555 5789999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~a 294 (342)
+|.. ++...+ +..-..++++..+|.+.-|= -.++.|.+.+...++.++
T Consensus 77 vk~~-~~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 77 LKTF-ANSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIGG 124 (312)
T ss_dssp CCGG-GGGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEEE
T ss_pred cCCC-CcHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEEE
Confidence 9853 334333 23334577899999987762 225667777755555443
No 181
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.48 E-value=0.00081 Score=61.68 Aligned_cols=113 Identities=12% Similarity=0.028 Sum_probs=72.4
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READ 238 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aD 238 (342)
..+.||++.|+|.|.+|++++..| ...|+ +|.+++|+.++ .+...+.+.. ..... .+++++- .++|
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L-~~~G~~~v~i~~R~~~~-a~~la~~~~~-------~~~~~---~~~~~l~~~~~D 183 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPF-LQAGPSELVIANRDMAK-ALALRNELDH-------SRLRI---SRYEALEGQSFD 183 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTCCSEEEEECSCHHH-HHHHHHHHCC-------TTEEE---ECSGGGTTCCCS
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCEEEEEeCCHHH-HHHHHHHhcc-------CCeeE---eeHHHhcccCCC
Confidence 457899999999999999999998 57896 99999998754 2222222210 01111 1223332 7899
Q ss_pred EEEEcCCCCcccc-cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 239 VISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 239 iV~l~~pl~~~t~-~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
+|+.++|..-... -.+.. +.++++.+++++.-.+. .+.-|.+|-+.|
T Consensus 184 ivInaTp~gm~~~~~~i~~---~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G 231 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLPA---DVLGEAALAYELAYGKG-LTPFLRLAREQG 231 (272)
T ss_dssp EEEECSSGGGGTCCCCCCG---GGGTTCSEEEESSCSCC-SCHHHHHHHHHS
T ss_pred EEEECCCCCCCCCCCCCCH---HHhCcCCEEEEeecCCC-CCHHHHHHHHCC
Confidence 9999998643211 13443 35678999999977654 344344454444
No 182
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.48 E-value=9.3e-05 Score=60.33 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=56.2
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCC---HHHH-hhcCCE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADV 239 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~l-l~~aDi 239 (342)
.++++.|+|+|.+|+.+|+.| ...|.+|+++|+.++.. +.... .+...... ...+ ++++ +.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L-~~~g~~V~~id~~~~~~-~~~~~--------~~~~~~~g-d~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVREL-TAAGKKVLAVDKSKEKI-ELLED--------EGFDAVIA-DPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHH-HHHHH--------TTCEEEEC-CTTCHHHHHHSCCTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHH-HHHHH--------CCCcEEEC-CCCCHHHHHhCCcccCCE
Confidence 357899999999999999998 57899999999987542 22111 11110000 1112 2222 467999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEc
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINv 271 (342)
|++++|.. ..++.-....+.+....+++-+
T Consensus 74 vi~~~~~~--~~n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 74 VLITGSDD--EFNLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp EEECCSCH--HHHHHHHHHHHHHCCCCEEEEE
T ss_pred EEEecCCH--HHHHHHHHHHHHhCCceEEEEE
Confidence 99999832 2333334444445534444433
No 183
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.45 E-value=0.00031 Score=67.73 Aligned_cols=103 Identities=14% Similarity=0.054 Sum_probs=61.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEc---CCchhHHHHHHhhhhhhhh--cc-C--CC-Ccccc-ccCCHHHHhh
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD---LYQATRLEKFVTAYGQFLK--AN-G--EQ-PVTWK-RASSMDEVLR 235 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d---~~~~~~~~~~~~~~~~~~~--~~-~--~~-~~~~~-~~~~l~~ll~ 235 (342)
.+|+|||.|.||..+|..|++.-|.+|.+|+ ++++. .+......+..+. .. + .. ..... ...++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAER-WTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHH-HHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHH-HHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 3799999999999999998432489999999 44322 2221110000000 00 0 00 00111 2357888899
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEc
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINv 271 (342)
.+|+|++++|.. ..+.++ ++....+++++++|+.
T Consensus 82 ~aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 82 GADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp TCSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999953 333333 2333456788999984
No 184
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.45 E-value=0.0002 Score=59.28 Aligned_cols=102 Identities=8% Similarity=0.012 Sum_probs=60.2
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcc--ccccCCHHHH-hhcCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEV-LREADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l-l~~aDiV~ 241 (342)
++++.|+|+|.+|+.+++.| ...|.+|.++|+.+..+.+.....+ ..+..... ......++++ +.++|.|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L-~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQL-NQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHH-HHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 46799999999999999998 6789999999987533222211111 00111000 0011235554 78999999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
++++..+ .++.-....+.+.+...+|...++
T Consensus 77 ~~~~~d~--~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 77 ALSDNDA--DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp ECSSCHH--HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred EecCChH--HHHHHHHHHHHHCCCCEEEEEECC
Confidence 9998543 334434455566444445544333
No 185
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.40 E-value=0.00027 Score=58.33 Aligned_cols=105 Identities=11% Similarity=0.138 Sum_probs=70.4
Q ss_pred CCCeEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 164 KGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 164 ~gktvgIvG~----G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.-++|+|||. |++|..+++.| +..|.+|+..++..... .-.+...+.+++++-...|+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l-~~~G~~v~~vnp~~~~~-----------------~i~G~~~~~sl~el~~~vDl 73 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYL-REQGYRVLPVNPRFQGE-----------------ELFGEEAVASLLDLKEPVDI 73 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHH-HHTTCEEEEECGGGTTS-----------------EETTEECBSSGGGCCSCCSE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHH-HHCCCEEEEeCCCcccC-----------------cCCCEEecCCHHHCCCCCCE
Confidence 3568999999 89999999997 67888876666542010 00123345688888888999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~ 293 (342)
+++++|. +....++.+ ..+ ...++++++.+-. ++++.+..++..+.-
T Consensus 74 avi~vp~-~~~~~v~~~-~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir~ 120 (140)
T 1iuk_A 74 LDVFRPP-SALMDHLPE-VLA-LRPGLVWLQSGIR----HPEFEKALKEAGIPV 120 (140)
T ss_dssp EEECSCH-HHHTTTHHH-HHH-HCCSCEEECTTCC----CHHHHHHHHHTTCCE
T ss_pred EEEEeCH-HHHHHHHHH-HHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCEE
Confidence 9999996 566666643 333 3334666654332 467777777766653
No 186
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.37 E-value=0.00046 Score=64.39 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=60.9
Q ss_pred eEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|+|+|.|.+|..+|..|++. +|.+|..+|+.++.. +.............. .........++++ +++||+|++++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~-~~~~~~l~~~~~~~~-~~~~i~~t~d~~~-l~~aDvViiav~ 78 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIP-QGKALDMYESGPVGL-FDTKVTGSNDYAD-TANSDIVIITAG 78 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHH-HHHHHhHHhhhhccc-CCcEEEECCCHHH-HCCCCEEEEeCC
Confidence 799999999999999988653 688999999986432 221110000000000 1111222356666 899999999998
Q ss_pred CCcccccc-------cC----HH---HHhcCCCCcEEEEcCC
Q 019387 246 LDKTTYHL-------IN----KE---RLATMKKEAILVNCSR 273 (342)
Q Consensus 246 l~~~t~~l-------i~----~~---~l~~mk~ga~lINvaR 273 (342)
. +...+. .| ++ .+....+++.+++++-
T Consensus 79 ~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 79 L-PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp C-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred C-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4 333332 11 11 2222357888888843
No 187
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.36 E-value=0.00082 Score=62.19 Aligned_cols=107 Identities=18% Similarity=0.280 Sum_probs=65.5
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|||||+|.||+. .++.|.+.-++++. ++|+.++. .+.+.+.+ + ...+.++++++.+.|+|++|
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~a~~~-------~-----~~~~~~~~~ll~~~D~V~i~ 73 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVK-REKICSDY-------R-----IMPFDSIESLAKKCDCIFLH 73 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHH-HHHHHHHH-------T-----CCBCSCHHHHHTTCSEEEEC
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHc-------C-----CCCcCCHHHHHhcCCEEEEe
Confidence 58999999999997 88876433578887 68988753 23222222 1 11257999999999999999
Q ss_pred CCCCcccccccCHHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHcCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEA-ILVN-CSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga-~lIN-vaRG~~vd~~aL~~aL~~g~ 290 (342)
+|...+ .-+ ....++.|. +|+. -.--.+-+.+.|.++.++..
T Consensus 74 tp~~~h--~~~---~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 74 SSTETH--YEI---IKILLNLGVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp CCGGGH--HHH---HHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred CCcHhH--HHH---HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 994322 212 222334443 4443 22223344555666665533
No 188
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.36 E-value=0.042 Score=51.47 Aligned_cols=115 Identities=18% Similarity=0.237 Sum_probs=75.7
Q ss_pred ccCCCeEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~L~gktvgIvG~G--~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.+.|.+|+++|=| ++.++.+..+ ..||++|.+..|..-...+...+.........| ..+....+++++++++|+
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 239 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIAC-AKMGMNFVACGPEELKPRSDVFKRCQEIVKETD---GSVSFTSNLEEALAGADV 239 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHC---CEEEEESCHHHHHTTCSE
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEcCHHHHHccCCE
Confidence 3789999999986 9999999987 579999999887542211111110000011111 123345789999999999
Q ss_pred EEEcCCC----C---cc-----cccccCHHHHhcC-CCCcEEEEcC---CCcccCHH
Q 019387 240 ISLHPVL----D---KT-----TYHLINKERLATM-KKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 240 V~l~~pl----~---~~-----t~~li~~~~l~~m-k~ga~lINva---RG~~vd~~ 280 (342)
|..-.-. . ++ ...-++.+.++.+ |++++|.-+. ||.=|+.+
T Consensus 240 vyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~e 296 (325)
T 1vlv_A 240 VYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYE 296 (325)
T ss_dssp EEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHH
T ss_pred EEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCHH
Confidence 9774331 0 11 2356789999999 9999998875 56666654
No 189
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.36 E-value=0.04 Score=51.41 Aligned_cols=115 Identities=16% Similarity=0.191 Sum_probs=75.9
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|.+|++||= +++.++.+..+ ..||++|.+..|..-...+...+.........| ..+....++++.++++|+|
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~~~~~~d~~eav~~aDvv 227 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAG-TKLGADVVVATPEGYEPDEKVIKWAEQNAAESG---GSFELLHDPVKAVKDADVI 227 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSEE
T ss_pred CcCCcEEEEECCCcchHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCEE
Confidence 378999999997 89999999986 579999999887542111111110000001111 1233457899999999999
Q ss_pred EEcCCC----C---cc-----cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 241 SLHPVL----D---KT-----TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 241 ~l~~pl----~---~~-----t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
..-.-. . ++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 228 y~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~e 282 (315)
T 1pvv_A 228 YTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDD 282 (315)
T ss_dssp EECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHH
Confidence 774331 0 11 13567899999999999999875 67666654
No 190
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.35 E-value=0.00077 Score=66.00 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=72.5
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhh--------hhhhhccCCCCccccccCCHHHHhh
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~ll~ 235 (342)
+-.+|+|||+|-+|-.+|..|+ ..|.+|++||..++. .+.....- .+++.+. ...-.....++.++.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A-~~G~~V~g~Did~~k-V~~ln~G~~pi~Epgl~ell~~~-~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFA-LLGHRVVGYDVNPSI-VERLRAGRPHIYEPGLEEALGRA-LSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSCHHH-HHHHHTTCCSSCCTTHHHHHHHH-HHTTCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHH-hCCCcEEEEECCHHH-HHHHHCCCCCCCCCCHHHHHHHH-HHcCCeeEEcCHHHHHh
Confidence 4568999999999999999985 568999999998753 33322110 0000000 00001123467888899
Q ss_pred cCCEEEEcCCCCcccccccC--------HHHHhcC---CCCcEEEEcCCCcccCHHHHH-HHHHc
Q 019387 236 EADVISLHPVLDKTTYHLIN--------KERLATM---KKEAILVNCSRGPVIDEVALV-EHLKQ 288 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~--------~~~l~~m---k~ga~lINvaRG~~vd~~aL~-~aL~~ 288 (342)
.||++++|+|......+-.| +..-..| .+|.++|.-|.-.+=..+.+. ..|++
T Consensus 97 ~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~ 161 (444)
T 3vtf_A 97 ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE 161 (444)
T ss_dssp TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT
T ss_pred cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH
Confidence 99999999984322222222 1222234 368899997776654444443 34443
No 191
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=97.34 E-value=0.016 Score=53.83 Aligned_cols=99 Identities=25% Similarity=0.353 Sum_probs=69.3
Q ss_pred ccCCCeEEEEecC---HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 162 LLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~L~gktvgIvG~G---~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.+.|.+|++||=| ++.++.+..+ ..||++|.+..|..-.. + . ...+ ...+++++++++|
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~-~-------------~-~~~g--~~~d~~eav~~aD 205 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVL-TRLGARVLFSGPSEWQD-E-------------E-NTFG--TYVSMDEAVESSD 205 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGSC-T-------------T-CSSC--EECCHHHHHHHCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHH-HHcCCEEEEECCCccCc-c-------------h-hhcC--ccCCHHHHhCCCC
Confidence 3789999999975 7999999986 57999999987743111 0 0 0011 2358999999999
Q ss_pred EEEEcCCCCcc-----------cccccCHHHHhcCCCCcEEEEcC---CCcccC
Q 019387 239 VISLHPVLDKT-----------TYHLINKERLATMKKEAILVNCS---RGPVID 278 (342)
Q Consensus 239 iV~l~~pl~~~-----------t~~li~~~~l~~mk~ga~lINva---RG~~vd 278 (342)
+|..-.-..+. ...-++.+.++.+|++++|.-+. ||.=|+
T Consensus 206 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHclP~~Rg~EI~ 259 (304)
T 3r7f_A 206 VVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEID 259 (304)
T ss_dssp EEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCSCCCBTTTBC
T ss_pred EEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCCCCCCCceeC
Confidence 99874322111 12447889999999999998875 554333
No 192
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=97.32 E-value=0.018 Score=54.18 Aligned_cols=193 Identities=15% Similarity=0.144 Sum_probs=110.7
Q ss_pred HHHHHHhCCCeEEEecCCCCCC----CHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhH
Q 019387 29 WINLLIEQDCRVEICTQKKTIL----SVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNA 104 (342)
Q Consensus 29 ~~~~l~~~~~~v~~~~~~~~~~----~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~G~d~id~~~ 104 (342)
|-.+..+.|.++......+... +-+|....+..=+|+|+.+.. ..+.+.. .
T Consensus 62 FE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~---~~~~~~~----------------------l 116 (333)
T 1duv_G 62 FEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGY---GQEIVET----------------------L 116 (333)
T ss_dssp HHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTTCSEEEEECS---CHHHHHH----------------------H
T ss_pred HHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHHhCCEEEEEcC---CchHHHH----------------------H
Confidence 4445566777777665443222 334444444433566666532 2222222 2
Q ss_pred HHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC--HHHHHHHH
Q 019387 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (342)
Q Consensus 105 ~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G--~IG~~vA~ 182 (342)
++-.+|+|.|.-+....++- +++=++.+.+++ .|..+.|.+|++||=| +++++.+.
T Consensus 117 A~~~~vPVINa~~~~~HPtQ--~LaDl~Ti~e~~--------------------~g~~l~gl~ia~vGD~~~~va~Sl~~ 174 (333)
T 1duv_G 117 AEYASVPVWNGLTNEFHPTQ--LLADLLTMQEHL--------------------PGKAFNEMTLVYAGDARNNMGNSMLE 174 (333)
T ss_dssp HHHHSSCEEESCCSSCCHHH--HHHHHHHHHHHS--------------------TTCCGGGCEEEEESCTTSHHHHHHHH
T ss_pred HHhCCCCeEcCCCCCCCchH--HHHHHHHHHHHh--------------------cCCCCCCcEEEEECCCccchHHHHHH
Confidence 33346999997765444432 222233332210 1224789999999986 99999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCC--Ccc-----------
Q 019387 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL--DKT----------- 249 (342)
Q Consensus 183 ~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl--~~~----------- 249 (342)
.+ ..||++|.+..|..-...+...+.........| ..+....++++.++++|+|..-.-. ..+
T Consensus 175 ~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~ 250 (333)
T 1duv_G 175 AA-ALTGLDLRLVAPQACWPEAALVTECRALAQQNG---GNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALL 250 (333)
T ss_dssp HH-HHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTT---CEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHH
T ss_pred HH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHh
Confidence 86 578999999887542211111110000111112 1233457899999999999774331 110
Q ss_pred cccccCHHHHhcC-CCCcEEEEcC
Q 019387 250 TYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 250 t~~li~~~~l~~m-k~ga~lINva 272 (342)
...-++.+.++.+ |++++|.-+.
T Consensus 251 ~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 251 REYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp GGGCBCHHHHHTTCCTTCEEEECS
T ss_pred hccccCHHHHHhccCCCcEEECCC
Confidence 2356789999999 9999998874
No 193
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.32 E-value=0.00061 Score=62.72 Aligned_cols=117 Identities=17% Similarity=0.193 Sum_probs=71.0
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
.+.|+++.|+|.|.||+++|+.| ...| +|++++++.+. .+...+.+..... ....... ...++.+.+.++|+|+
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L-~~~G-~V~v~~r~~~~-~~~l~~~~~~~~~--~~~~~~~-d~~~~~~~~~~~DilV 198 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFEL-AKDN-NIIIANRTVEK-AEALAKEIAEKLN--KKFGEEV-KFSGLDVDLDGVDIII 198 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHH-TSSS-EEEEECSSHHH-HHHHHHHHHHHHT--CCHHHHE-EEECTTCCCTTCCEEE
T ss_pred CcCCCEEEEECchHHHHHHHHHH-HHCC-CEEEEECCHHH-HHHHHHHHhhhcc--cccceeE-EEeeHHHhhCCCCEEE
Confidence 47799999999999999999998 5789 99999998643 2222222111000 0000000 0112345567899999
Q ss_pred EcCCCCcccc---cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 242 LHPVLDKTTY---HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 242 l~~pl~~~t~---~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
.+.|...... ..+. ..+.++++++++|+.-.+.. .. |.+..++
T Consensus 199 n~ag~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p~~-t~-ll~~a~~ 244 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNPLE-TV-LLKEAKK 244 (287)
T ss_dssp ECSCTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSSSS-CH-HHHHHHT
T ss_pred ECCCCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCCcc-CH-HHHHHHH
Confidence 9998653211 1120 13568899999999875433 33 5554444
No 194
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.30 E-value=0.0016 Score=60.87 Aligned_cols=120 Identities=14% Similarity=0.192 Sum_probs=74.2
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchh--HHHHHHhhhhhhhhccCCCCccccccCCH---HHHh
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSM---DEVL 234 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~ll 234 (342)
..+.||++.|+|.|.+|++++..| ...|+ +|.+++|..+. +.+...+.+.. ..+. ........++ .+.+
T Consensus 144 ~~l~gk~~lVlGAGGaaraia~~L-~~~G~~~v~v~nRt~~~~~~a~~la~~~~~---~~~~-~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 144 FDMRGKTMVLLGAGGAATAIGAQA-AIEGIKEIKLFNRKDDFFEKAVAFAKRVNE---NTDC-VVTVTDLADQHAFTEAL 218 (312)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTHHHHHHHHHHHHHH---HSSC-EEEEEETTCHHHHHHHH
T ss_pred CCcCCCEEEEECcCHHHHHHHHHH-HHcCCCEEEEEECCCchHHHHHHHHHHhhh---ccCc-ceEEechHhhhhhHhhc
Confidence 357899999999999999999998 57898 89999998321 22222221111 0010 0111122344 5678
Q ss_pred hcCCEEEEcCCCCc--cccccc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 235 READVISLHPVLDK--TTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 235 ~~aDiV~l~~pl~~--~t~~li--~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
.++|+|+.+.|..- .....+ +. +.++++.+++++.-.+. .+.=|.+|-+.|
T Consensus 219 ~~~DiIINaTp~Gm~~~~~~~~~~~~---~~l~~~~~v~D~vY~P~-~T~ll~~A~~~G 273 (312)
T 3t4e_A 219 ASADILTNGTKVGMKPLENESLIGDV---SLLRPELLVTECVYNPH-MTKLLQQAQQAG 273 (312)
T ss_dssp HHCSEEEECSSTTSTTSTTCCSCCCG---GGSCTTCEEEECCCSSS-SCHHHHHHHHTT
T ss_pred cCceEEEECCcCCCCCCCCCcccCCH---HHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 89999999999742 111111 32 45678999999877664 344444554544
No 195
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.29 E-value=0.0092 Score=55.53 Aligned_cols=148 Identities=16% Similarity=0.109 Sum_probs=91.4
Q ss_pred HHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC--HHHHHHHH
Q 019387 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (342)
Q Consensus 105 ~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G--~IG~~vA~ 182 (342)
++-.+|+|.|..+.+..++- +++=++.+.++. | .+.|.+|++||=| ++.++.+.
T Consensus 112 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~---------------------g-~l~gl~va~vGD~~~rva~Sl~~ 167 (307)
T 2i6u_A 112 ASVATVPVINALSDEFHPCQ--VLADLQTIAERK---------------------G-ALRGLRLSYFGDGANNMAHSLLL 167 (307)
T ss_dssp HHHCSSCEEESCCSSCCHHH--HHHHHHHHHHHH---------------------S-CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HhhCCCCEEcCCCCCcCccH--HHHHHHHHHHHh---------------------C-CcCCeEEEEECCCCcCcHHHHHH
Confidence 34456999998775544432 222233333211 1 3789999999986 99999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCC-------Ccc-----c
Q 019387 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL-------DKT-----T 250 (342)
Q Consensus 183 ~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl-------~~~-----t 250 (342)
.+ ..||++|.+..|..-...+...+.........| ..+....++++.++++|+|..-.-. .++ .
T Consensus 168 ~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~ 243 (307)
T 2i6u_A 168 GG-VTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTG---ASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFR 243 (307)
T ss_dssp HH-HHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGG
T ss_pred HH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHh
Confidence 87 579999999887542211111110000011112 1133457899999999999774320 011 1
Q ss_pred ccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 251 YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 251 ~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
..-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 244 ~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 276 (307)
T 2i6u_A 244 PFQLNSRLLALADSDAIVLHCLPAHRGDEITDA 276 (307)
T ss_dssp GGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred hcCCCHHHHhhcCCCcEEECCCCCCCCcccCHh
Confidence 3556889999999999998875 56656554
No 196
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.29 E-value=0.0012 Score=61.34 Aligned_cols=109 Identities=15% Similarity=0.190 Sum_probs=66.4
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|||||+|.||+. +++.+.+.-++++. ++|+.++.. +.+.+.+ +. ...++++++..+.|+|++|
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~~~~~-------g~-----~~~~~~~~l~~~~D~V~i~ 72 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICESW-------RI-----PYADSLSSLAASCDAVFVH 72 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHHH-------TC-----CBCSSHHHHHTTCSEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHc-------CC-----CccCcHHHhhcCCCEEEEe
Confidence 48999999999997 88876433478876 789887542 2222221 11 1346777776789999999
Q ss_pred CCCCcccccccCHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCce
Q 019387 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga-~lINv-aRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|.... . +-....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 73 tp~~~h--~---~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 73 SSTASH--F---DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp SCTTHH--H---HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCchhH--H---HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 995322 1 22223455565 55542 222334456677777665443
No 197
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.27 E-value=0.0013 Score=60.66 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=70.4
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
..+.|+++.|+|.|.+|++++..| ...|+ +|.+++|..++. ++..+.+ ......++++ + ++|+
T Consensus 118 ~~~~~k~vlvlGaGGaaraia~~L-~~~G~~~v~v~nRt~~ka-~~La~~~------------~~~~~~~l~~-l-~~Di 181 (282)
T 3fbt_A 118 VEIKNNICVVLGSGGAARAVLQYL-KDNFAKDIYVVTRNPEKT-SEIYGEF------------KVISYDELSN-L-KGDV 181 (282)
T ss_dssp CCCTTSEEEEECSSTTHHHHHHHH-HHTTCSEEEEEESCHHHH-HHHCTTS------------EEEEHHHHTT-C-CCSE
T ss_pred CCccCCEEEEECCcHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHHhc------------CcccHHHHHh-c-cCCE
Confidence 357899999999999999999997 57898 999999987542 2211110 0111123444 4 8999
Q ss_pred EEEcCCCC--cccc-cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 240 ISLHPVLD--KTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 240 V~l~~pl~--~~t~-~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
|+.++|.. ++.. -.++.+. ++++.+++++.-.+. .+.=|.+|-+.|
T Consensus 182 vInaTp~Gm~~~~~~~pi~~~~---l~~~~~v~DlvY~P~-~T~ll~~A~~~G 230 (282)
T 3fbt_A 182 IINCTPKGMYPKEGESPVDKEV---VAKFSSAVDLIYNPV-ETLFLKYARESG 230 (282)
T ss_dssp EEECSSTTSTTSTTCCSSCHHH---HTTCSEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EEECCccCccCCCccCCCCHHH---cCCCCEEEEEeeCCC-CCHHHHHHHHCc
Confidence 99999973 2211 2355554 468899999876553 334344454444
No 198
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.27 E-value=0.00042 Score=57.36 Aligned_cols=103 Identities=10% Similarity=0.102 Sum_probs=69.7
Q ss_pred CCeEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvgIvG~----G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
-++|+|||. |++|..+++.| +..|.+|+..++.... -.+...+.+++++....|++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l-~~~G~~v~~Vnp~~~~-------------------i~G~~~y~sl~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYL-LEHGYDVYPVNPKYEE-------------------VLGRKCYPSVLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSE-------------------ETTEECBSSGGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHH-HHCCCEEEEECCCCCe-------------------ECCeeccCCHHHcCCCCCEE
Confidence 579999999 79999999997 6788887766664311 01233456888888889999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~a 294 (342)
++++|. +....++. +..+ ...++++++.+ . .++.+.+..++..+.-.
T Consensus 82 vi~vp~-~~~~~vv~-~~~~-~gi~~i~~~~g--~--~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 82 DLFVKP-KLTMEYVE-QAIK-KGAKVVWFQYN--T--YNREASKKADEAGLIIV 128 (144)
T ss_dssp EECSCH-HHHHHHHH-HHHH-HTCSEEEECTT--C--CCHHHHHHHHHTTCEEE
T ss_pred EEEeCH-HHHHHHHH-HHHH-cCCCEEEECCC--c--hHHHHHHHHHHcCCEEE
Confidence 999995 45555553 3333 33345665533 2 26778888877666533
No 199
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.26 E-value=0.0014 Score=61.21 Aligned_cols=69 Identities=25% Similarity=0.425 Sum_probs=50.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+.++. .+.+.+.+ +.. +.++++++. +.|+|++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~------------~~~-~~~~~~~l~~~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAA-AEAIAGAY------------GCE-VRTIDAIEAAADIDAVVI 69 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHH-HHHHHHHT------------TCE-ECCHHHHHHCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHH-HHHHHHHh------------CCC-cCCHHHHhcCCCCCEEEE
Confidence 4899999999999999987433488887 58988754 22222221 122 578999998 8999999
Q ss_pred cCCCCc
Q 019387 243 HPVLDK 248 (342)
Q Consensus 243 ~~pl~~ 248 (342)
|+|...
T Consensus 70 ~tp~~~ 75 (331)
T 4hkt_A 70 CTPTDT 75 (331)
T ss_dssp CSCGGG
T ss_pred eCCchh
Confidence 999543
No 200
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.26 E-value=0.035 Score=51.43 Aligned_cols=190 Identities=13% Similarity=0.065 Sum_probs=114.0
Q ss_pred HHHHHHhCCCeEEEecCCCCC----CCHHHHHHHhCCCceEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhH
Q 019387 29 WINLLIEQDCRVEICTQKKTI----LSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNA 104 (342)
Q Consensus 29 ~~~~l~~~~~~v~~~~~~~~~----~~~~e~~~~~~~~~d~vi~~~~~~~~~e~l~~l~~l~~k~i~~~~~G~d~id~~~ 104 (342)
|-.+..+.|.++......+.. -+-+|..+-+..=+|+|+.+.. ....+.. .
T Consensus 63 Fe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~---~~~~~~~----------------------l 117 (301)
T 2ef0_A 63 LEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGIAARVF---RHETVEA----------------------L 117 (301)
T ss_dssp HHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTTCSEEEEECS---SHHHHHH----------------------H
T ss_pred HHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHhCCEEEEecC---ChHHHHH----------------------H
Confidence 444556677777666543322 2344444444433577666632 1222221 2
Q ss_pred HHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEec-CHHHHHHHHH
Q 019387 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA-GRIGSAYARM 183 (342)
Q Consensus 105 ~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~-G~IG~~vA~~ 183 (342)
++..+|+|.|..+.+..++- +++=++.+.++. | .+.|.+|+++|= +++.++.+..
T Consensus 118 a~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~---------------------g-~l~gl~ia~vGD~~rva~Sl~~~ 173 (301)
T 2ef0_A 118 ARHAKVPVVNALSDRAHPLQ--ALADLLTLKEVF---------------------G-GLAGLEVAWVGDGNNVLNSLLEV 173 (301)
T ss_dssp HHHCSSCEEEEECSSCCHHH--HHHHHHHHHHHH---------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHHCCCCEEeCCCCccCchH--HHHHHHHHHHHh---------------------C-CcCCcEEEEECCCchhHHHHHHH
Confidence 33346899997665444332 222233333211 1 378999999997 8999999998
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCC------cc------cc
Q 019387 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD------KT------TY 251 (342)
Q Consensus 184 l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~------~~------t~ 251 (342)
+ ..||++|.+..|..-...+...+. . .+....++++.++++|+|..-.-.. +. ..
T Consensus 174 ~-~~~g~~v~~~~P~~~~~~~~~~~~----~--------~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~ 240 (301)
T 2ef0_A 174 A-PLAGLKVRVATPKGYEPDPGLLKR----A--------NAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQG 240 (301)
T ss_dssp H-HHHTCEEEEECCTTCCCCHHHHHH----H--------TCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTT
T ss_pred H-HHcCCEEEEECCchhcCCHHHHhh----c--------eeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhc
Confidence 6 578999999887542211111110 0 0223578999999999997743210 11 23
Q ss_pred cccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 252 HLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
.-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 241 y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 241 FQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp CCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred cccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 567899999999999999987 77767665
No 201
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.22 E-value=0.00041 Score=64.88 Aligned_cols=117 Identities=10% Similarity=0.130 Sum_probs=67.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.++|+|||.|.||..+|..|+ .-|. +|..||+.++.. +............. ..........++ +.+++||+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la-~~g~~~V~l~D~~~~~~-~~~~~~l~~~~~~~-~~~~~i~~t~d~-~a~~~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG-KDNLADVVLFDIAEGIP-QGKALDITHSMVMF-GSTSKVIGTDDY-ADISGSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHH-HHHHHHHHHHHHHH-TCCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCCchHH-HHHHHHHHhhhhhc-CCCcEEEECCCH-HHhCCCCEEEEe
Confidence 468999999999999999885 4466 899999986432 22100000000000 011112222456 678999999999
Q ss_pred CCCCcccccc------------cC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 019387 244 PVLDKTTYHL------------IN--KERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 244 ~pl~~~t~~l------------i~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL 286 (342)
++. +...++ +. .+.+....+++++|+++-..-+....+.++.
T Consensus 80 vg~-p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 80 ASI-PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CCC-SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCC-CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 843 221111 10 0122233468999999876555555566654
No 202
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.22 E-value=0.0044 Score=58.33 Aligned_cols=107 Identities=13% Similarity=0.195 Sum_probs=71.3
Q ss_pred ccCCCeEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~L~gktvgIvG~G--~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.+.|.+|++||=| +++++.+..+ ..||++|.+..|..-...+...+.........| ..+....++++.++++|+
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIG-AKLGMDVRIAAPKALWPHDEFVAQCKKFAEESG---AKLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHH-HHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSE
T ss_pred CcCCeEEEEecCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCE
Confidence 4789999999996 9999999986 579999999887543211111110000011111 123345789999999999
Q ss_pred EEEcCCC--Cc--c---------cccccCHHHHhcC-CCCcEEEEcC
Q 019387 240 ISLHPVL--DK--T---------TYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 240 V~l~~pl--~~--~---------t~~li~~~~l~~m-k~ga~lINva 272 (342)
|..-.-. .. + ...-++.+.++.+ |++++|.-+.
T Consensus 228 vytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 228 VHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp EEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred EEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 9774331 11 0 2356789999999 9999998874
No 203
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.20 E-value=0.0017 Score=60.51 Aligned_cols=68 Identities=18% Similarity=0.304 Sum_probs=47.8
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV~l~~ 244 (342)
+|||||+|.||+..++.+.+.-++++. ++|++++.. +.+.+.+ +. ...+.++++++ .+.|+|++|+
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~-~~~~~~~-------~~----~~~~~~~~~~l~~~~D~V~i~t 70 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETA-ATFASRY-------QN----IQLFDQLEVFFKSSFDLVYIAS 70 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHH-HHHGGGS-------SS----CEEESCHHHHHTSSCSEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------CC----CeEeCCHHHHhCCCCCEEEEeC
Confidence 799999999999999987433367765 788876532 2221111 11 12357899999 7899999999
Q ss_pred CC
Q 019387 245 VL 246 (342)
Q Consensus 245 pl 246 (342)
|.
T Consensus 71 p~ 72 (325)
T 2ho3_A 71 PN 72 (325)
T ss_dssp CG
T ss_pred Ch
Confidence 94
No 204
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.00076 Score=65.00 Aligned_cols=107 Identities=15% Similarity=0.219 Sum_probs=66.4
Q ss_pred eEEEEecCHHHHHHHHHHHhc-------CCcEEEEEcCCchhHHHHHHhhhhhh-----hhccCCCCccccccCCHHHHh
Q 019387 167 TVGVIGAGRIGSAYARMMVEG-------FKMNLIYYDLYQATRLEKFVTAYGQF-----LKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a-------fg~~V~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~ll 234 (342)
+|+|||-|.-|.++|..|++. |+.+|..|.+.++...+...+..... +...-.-+.......++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 899999999999999988642 33568888766532111111100000 000011122334457899999
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
++||+|++++|. ...+.++ ++.-..++++..+|+++-|=
T Consensus 116 ~~ad~ii~avPs-~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSCG-GGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECCh-hhhHHHH-HHhccccCCCceeEEecccc
Confidence 999999999994 3333333 23345678899999999883
No 205
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.15 E-value=0.0009 Score=59.57 Aligned_cols=97 Identities=21% Similarity=0.179 Sum_probs=61.9
Q ss_pred ccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
-..+.|++|.|||.|.+|...++.| ...|++|+++++........+.+. +. ..+....--++.+.++|+
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~L-l~~GA~VtVvap~~~~~l~~l~~~--------~~--i~~i~~~~~~~dL~~adL 94 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGF-LQEGAAITVVAPTVSAEINEWEAK--------GQ--LRVKRKKVGEEDLLNVFF 94 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHH-GGGCCCEEEECSSCCHHHHHHHHT--------TS--CEEECSCCCGGGSSSCSE
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHHc--------CC--cEEEECCCCHhHhCCCCE
Confidence 3579999999999999999999998 578999999998876544433221 11 111110111334678999
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+.+... ++ +|.......+ -.++||++.
T Consensus 95 VIaAT~d-~~----~N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 95 IVVATND-QA----VNKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp EEECCCC-TH----HHHHHHHHSC-TTCEEEC--
T ss_pred EEECCCC-HH----HHHHHHHHHh-CCCEEEEeC
Confidence 9988653 33 2344444445 457788743
No 206
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.14 E-value=0.0019 Score=60.88 Aligned_cols=76 Identities=18% Similarity=0.304 Sum_probs=49.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|+|||.|.+|..+|..|+ .-|. +|..||+.++. .+............ ...+.......++++.+++||+|+++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la-~~g~~~V~L~D~~~~~-~~~~~~~l~~~~~~-~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCA-LRELADVVLYDVVKGM-PEGKALDLSHVTSV-VDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSH-HHHHHHHHHHHHHH-TTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECChhH-HHHHHHHHHhhhhc-cCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 58999999999999999985 3455 89999998643 22211100000000 011222333468888899999999998
No 207
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=97.13 E-value=0.01 Score=55.90 Aligned_cols=114 Identities=17% Similarity=0.147 Sum_probs=73.6
Q ss_pred cCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
+.|++|++||= +++.++.+..+ ..||++|.+..|..-...+...+.........+ ..+....+++++++++|+|.
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDVvy 252 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLAS-AKVGMHMTVATPVGYRPNEEIVKKALAIAKETG---AEIEILHNPELAVNEADFIY 252 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHC---CCEEEESCHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhCCCCEEE
Confidence 78999999996 57788888876 578999999877532211111111000011111 12234578999999999997
Q ss_pred EcCCCCc----c-------cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 242 LHPVLDK----T-------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 242 l~~pl~~----~-------t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
.-.-... + ...-++.+.++.+|++++|.=+. ||.=|+.+
T Consensus 253 t~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 305 (340)
T 4ep1_A 253 TDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGE 305 (340)
T ss_dssp ECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred ecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 6543221 0 12457999999999999999886 78666654
No 208
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.12 E-value=0.00084 Score=62.38 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=62.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.|.+.-+.++. ++|+.++.. +. + ... ...+.+++++++ ++|+|++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~-~~----~----~~~------~~~~~~~~~~l~~~~~D~V~i 75 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNL-AL----V----PPG------CVIESDWRSVVSAPEVEAVII 75 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHH-TT----C----CTT------CEEESSTHHHHTCTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HH----H----Hhh------CcccCCHHHHhhCCCCCEEEE
Confidence 4799999999999999987433367755 789876532 11 0 000 223568899985 7999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga-~lINv-aRG~~vd~~aL~~aL~~g 289 (342)
|+|.. .+. +-....++.|. +++.- .--.+-+.+.|.++.++.
T Consensus 76 ~tp~~--~h~---~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~ 119 (315)
T 3c1a_A 76 ATPPA--THA---EITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKAT 119 (315)
T ss_dssp ESCGG--GHH---HHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHH
T ss_pred eCChH--HHH---HHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHc
Confidence 99842 221 22223355564 55542 111223345566666543
No 209
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=97.12 E-value=0.021 Score=53.15 Aligned_cols=106 Identities=17% Similarity=0.258 Sum_probs=70.9
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.+.|.+|++||= |++.++.+..+ ..||++|.+..|..-...+...+ .....+ ..+....+++++++++|
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~----~~~~~g---~~~~~~~d~~eav~~aD 223 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEAL-TFYDVELYLISPELLRMPRHIVE----ELREKG---MKVVETTTLEDVIGKLD 223 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHG-GGSCEEEEEECCGGGCCCHHHHH----HHHHTT---CCEEEESCTHHHHTTCS
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHH-HHCCCEEEEECCccccCCHHHHH----HHHHcC---CeEEEEcCHHHHhcCCC
Confidence 378999999998 48999999986 68999999988754321111111 011112 12333478999999999
Q ss_pred EEEEcCCCCcc------c-----ccccCHHHHhcCCCCcEEEEcC-CCc
Q 019387 239 VISLHPVLDKT------T-----YHLINKERLATMKKEAILVNCS-RGP 275 (342)
Q Consensus 239 iV~l~~pl~~~------t-----~~li~~~~l~~mk~ga~lINva-RG~ 275 (342)
+|..-.-..+. - ..-++.+.++.+|++++|.-+. ||.
T Consensus 224 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~ 272 (308)
T 1ml4_A 224 VLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVD 272 (308)
T ss_dssp EEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSCCSS
T ss_pred EEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCCCCC
Confidence 99775432211 0 2456888888889998888765 443
No 210
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.10 E-value=0.0016 Score=61.55 Aligned_cols=70 Identities=26% Similarity=0.396 Sum_probs=50.7
Q ss_pred CeEEEEecCHHHHHHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh--hcCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--READVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll--~~aDiV~ 241 (342)
.+|||||+|.||+..++.+ +.. ++++. ++|++++.. +.+.+.+ + ...+.++++++ .+.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~lvav~d~~~~~~-~~~~~~~-------g-----~~~~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAY-TKSEKLKLVTCYSRTEDKR-EKFGKRY-------N-----CAGDATMEALLAREDVEMVI 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTCSSEEEEEEECSSHHHH-HHHHHHH-------T-----CCCCSSHHHHHHCSSCCEEE
T ss_pred ceEEEEccCHHHHHHHHHH-HhCCCcEEEEEECCCHHHH-HHHHHHc-------C-----CCCcCCHHHHhcCCCCCEEE
Confidence 4899999999999999987 555 88866 679887532 2222222 1 22357999999 5699999
Q ss_pred EcCCCCcc
Q 019387 242 LHPVLDKT 249 (342)
Q Consensus 242 l~~pl~~~ 249 (342)
+|+|...+
T Consensus 72 i~tp~~~h 79 (354)
T 3db2_A 72 ITVPNDKH 79 (354)
T ss_dssp ECSCTTSH
T ss_pred EeCChHHH
Confidence 99996443
No 211
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.10 E-value=0.002 Score=60.40 Aligned_cols=69 Identities=20% Similarity=0.263 Sum_probs=48.1
Q ss_pred CeEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~-~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~ 241 (342)
.+|||||+|.||+..++.++ +.-+++++ ++|++++.. +.+.+.+ +.. ..+.++++++. +.|+|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~-~~~a~~~-------g~~----~~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQL-EWAKNEL-------GVE----TTYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHH-HHHHHTT-------CCS----EEESCHHHHHTTSCCSEEE
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHHHHHh-------CCC----cccCCHHHHhcCCCCCEEE
Confidence 48999999999999999874 33478865 689876532 2221111 110 23468999986 699999
Q ss_pred EcCCC
Q 019387 242 LHPVL 246 (342)
Q Consensus 242 l~~pl 246 (342)
+|+|.
T Consensus 77 i~tp~ 81 (346)
T 3cea_A 77 IVAPT 81 (346)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99984
No 212
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.09 E-value=0.0014 Score=61.54 Aligned_cols=70 Identities=24% Similarity=0.358 Sum_probs=50.7
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.|.+.-+++++ ++|+.++.. +.+.+.+ + ...+.++++++. +.|+|++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~~~l~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGA-QRLAEAN-------G-----AEAVASPDEVFARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHTT-------T-----CEEESSHHHHTTCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433478877 688876542 2222211 1 234579999998 8999999
Q ss_pred cCCCCc
Q 019387 243 HPVLDK 248 (342)
Q Consensus 243 ~~pl~~ 248 (342)
|+|...
T Consensus 72 ~tp~~~ 77 (344)
T 3euw_A 72 GSPTST 77 (344)
T ss_dssp CSCGGG
T ss_pred eCCchh
Confidence 999543
No 213
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.08 E-value=0.0022 Score=60.04 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=50.6
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.|.+.-++++. ++|++++. .+.+.+.+ +.. ..+.++++++. +.|+|++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~-------~~~----~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLEN-AQKMAKEL-------AIP----VAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHH-HHHHHHHT-------TCC----CCBSSHHHHHHCTTCSEEEE
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHH-HHHHHHHc-------CCC----ceeCCHHHHhcCCCCCEEEE
Confidence 4899999999999999987433478877 57887653 23322222 111 23579999998 7999999
Q ss_pred cCCCCc
Q 019387 243 HPVLDK 248 (342)
Q Consensus 243 ~~pl~~ 248 (342)
|+|...
T Consensus 74 ~tp~~~ 79 (330)
T 3e9m_A 74 PTYNQG 79 (330)
T ss_dssp CCCGGG
T ss_pred cCCCHH
Confidence 999543
No 214
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.06 E-value=0.0023 Score=59.63 Aligned_cols=67 Identities=16% Similarity=0.267 Sum_probs=47.4
Q ss_pred eEEEEecCHHHHHH-HHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 167 TVGVIGAGRIGSAY-ARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 167 tvgIvG~G~IG~~v-A~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
+|||||+|.||+.. ++.+.+ -+++++ ++|++++.. +.+.+.+ +.. ..+.++++++. +.|+|++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~-~~~~~~~-------g~~----~~~~~~~~~l~~~~~D~V~i 68 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERG-AAYATEN-------GIG----KSVTSVEELVGDPDVDAVYV 68 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHH-HHHHHHT-------TCS----CCBSCHHHHHTCTTCCEEEE
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHH-HHHHHHc-------CCC----cccCCHHHHhcCCCCCEEEE
Confidence 79999999999998 777655 788876 689886542 2222221 111 13468999987 4999999
Q ss_pred cCCC
Q 019387 243 HPVL 246 (342)
Q Consensus 243 ~~pl 246 (342)
++|.
T Consensus 69 ~tp~ 72 (332)
T 2glx_A 69 STTN 72 (332)
T ss_dssp CSCG
T ss_pred eCCh
Confidence 9994
No 215
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=97.06 E-value=0.048 Score=50.64 Aligned_cols=115 Identities=15% Similarity=0.159 Sum_probs=74.0
Q ss_pred ccC-CCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 162 LLK-GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~L~-gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.+. |++|++||= +++.++.+..+ ..||++|.+..|..-...+...+.........+ ..+....++++.++++|+
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~~~~~~d~~eav~~aDv 217 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITA-AILGFEISIAMPKNYKISPEIWEFAMKQALISG---AKISLGYDKFEALKDKDV 217 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCSE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcC---CeEEEEcCHHHHhcCCCE
Confidence 367 999999995 57888888876 578999999887532111111110000000111 123345799999999999
Q ss_pred EEEcCC--CCcc----------cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 240 ISLHPV--LDKT----------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 240 V~l~~p--l~~~----------t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
|..-.- ...+ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 218 vyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 218 VITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp EEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 976541 1111 13557899999999999998875 77767655
No 216
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=97.04 E-value=0.068 Score=49.96 Aligned_cols=115 Identities=17% Similarity=0.125 Sum_probs=73.3
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|++|++||= +++.++.+..+ ..+|++|.+..|..-...+...+.........+ ..+....++++.++++|+|
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvv 229 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGC-AKVGMSIAVATPEGFTPDPAVSARASEIAGRTG---AEVQILRDPFEAARGAHIL 229 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHH-HHcCCEEEEECCCcccCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEE
Confidence 378999999996 67888888876 578999999877532111111110000001111 1233457899999999999
Q ss_pred EEcCCCCc--c----------cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 241 SLHPVLDK--T----------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 241 ~l~~pl~~--~----------t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
..-.-... + ...-++.+.++.+|++++|.=+. ||.=|+.+
T Consensus 230 yt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~e 284 (323)
T 3gd5_A 230 YTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDE 284 (323)
T ss_dssp EECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHH
Confidence 76543211 0 12457999999999999998874 77666654
No 217
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=97.04 E-value=0.078 Score=50.17 Aligned_cols=114 Identities=12% Similarity=0.163 Sum_probs=72.0
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|.+|++||= +++.++.+..+ ..||++|.+..|..-...+...+.........+ ..+....+++ .++++|+|
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~-av~~aDVV 224 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFL 224 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHS---CEEEEECCGG-GGTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcC---CeEEEECCHH-HHcCCCEE
Confidence 478999999996 67888888886 579999999887532211111110000001111 1223356888 99999999
Q ss_pred EEcC----CCCccc----------ccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 241 SLHP----VLDKTT----------YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 241 ~l~~----pl~~~t----------~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
..-+ ...++. ..-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 225 ytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 281 (355)
T 4a8p_A 225 YTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 281 (355)
T ss_dssp EECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred EecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 8633 111110 2457889999999999998875 67666654
No 218
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.04 E-value=0.03 Score=51.89 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=71.2
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 237 (342)
.+.|.+|++||= |++.++.+..+ ..| |++|.+..|..-...+.. ....+ ..+....+++++++++
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~-------~~~~g---~~~~~~~d~~eav~~a 214 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRIL-TRFRPKLVYLISPQLLRARKEI-------LDELN---YPVKEVENPFEVINEV 214 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHG-GGSCCSEEEEECCGGGCCCHHH-------HTTCC---SCEEEESCGGGTGGGC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCchhcCCHHH-------HHHcC---CeEEEeCCHHHHhcCC
Confidence 378999999998 59999999986 678 999999887542211111 11111 1233447899999999
Q ss_pred CEEEEcCCCCcc-----------cccccCHHHHhcCCCCcEEEEcC-CCc
Q 019387 238 DVISLHPVLDKT-----------TYHLINKERLATMKKEAILVNCS-RGP 275 (342)
Q Consensus 238 DiV~l~~pl~~~-----------t~~li~~~~l~~mk~ga~lINva-RG~ 275 (342)
|+|..-.-..+. ...-++.+.++.+|++++|.-+. ||.
T Consensus 215 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lPrg~ 264 (299)
T 1pg5_A 215 DVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVN 264 (299)
T ss_dssp SEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSS
T ss_pred CEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCCCCC
Confidence 999665543321 13567889999999999888775 443
No 219
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=97.03 E-value=0.012 Score=55.13 Aligned_cols=140 Identities=16% Similarity=0.113 Sum_probs=84.5
Q ss_pred HHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecC-HHHHHHHHH
Q 019387 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG-RIGSAYARM 183 (342)
Q Consensus 105 ~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G-~IG~~vA~~ 183 (342)
++..+|+|.|..+.+..++- +++=++.+.++. | .+.|.+|++||=| ++.++.+..
T Consensus 119 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~---------------------g-~l~gl~va~vGD~~~va~Sl~~~ 174 (321)
T 1oth_A 119 AKEASIPIINGLSDLYHPIQ--ILADYLTLQEHY---------------------S-SLKGLTLSWIGDGNNILHSIMMS 174 (321)
T ss_dssp HHHCSSCEEESCCSSCCHHH--HHHHHHHHHHHH---------------------S-CCTTCEEEEESCSSHHHHHHHTT
T ss_pred HHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHHh---------------------C-CcCCcEEEEECCchhhHHHHHHH
Confidence 34456999998775544432 222233333211 1 3789999999985 477777776
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC--CCc--c--------cc
Q 019387 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV--LDK--T--------TY 251 (342)
Q Consensus 184 l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p--l~~--~--------t~ 251 (342)
+ ..||++|.+..|..-...+...+.........| ..+....++++.++++|+|..-+- ... + ..
T Consensus 175 ~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~ 250 (321)
T 1oth_A 175 A-AKFGMHLQAATPKGYEPDASVTKLAEQYAKENG---TKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQG 250 (321)
T ss_dssp T-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTT
T ss_pred H-HHcCCeEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccC
Confidence 5 578999999887542211111110000011111 123345789999999999988331 111 1 11
Q ss_pred cccCHHHHhcCCCCcEEEEcC
Q 019387 252 HLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 252 ~li~~~~l~~mk~ga~lINva 272 (342)
.-++.+.++.+|++++|.-+.
T Consensus 251 y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 251 YQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp CCBCHHHHHTSCTTCEEEECS
T ss_pred ceECHHHHhhcCCCCEEECCC
Confidence 457899999999999999885
No 220
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.01 E-value=0.0028 Score=59.00 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=60.6
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV~l~ 243 (342)
.+|||||+|+||+. .++.|.+.-++++.++|++++.. +.+.+.+ +... ...+..+++ .+.|+|++|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~-~~~a~~~-------g~~~----~~~~~~~~l~~~~D~V~i~ 70 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVL-GTLATRY-------RVSA----TCTDYRDVLQYGVDAVMIH 70 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHH-HHHHHHT-------TCCC----CCSSTTGGGGGCCSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHc-------CCCc----cccCHHHHhhcCCCEEEEE
Confidence 37999999999994 88887332378888999887542 2222222 1110 012333444 689999999
Q ss_pred CCCCcccccccCHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCce
Q 019387 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga-~lINv-aRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|.. .+.- -....++.|. +++.- .--.+-+-+.|.++.++..+.
T Consensus 71 tp~~--~h~~---~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 71 AATD--VHST---LAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp SCGG--GHHH---HHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCch--hHHH---HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 9942 2211 1223344453 55542 111222344566666554443
No 221
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=97.01 E-value=0.015 Score=55.20 Aligned_cols=106 Identities=16% Similarity=0.195 Sum_probs=70.2
Q ss_pred cCCCeEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhH--HHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 163 LKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATR--LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 163 L~gktvgIvG~G--~IG~~vA~~l~~afg~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
+.|++|++||=| +++++.+..+ ..||++|.+..|..-.. .+.+.+.........+ ..+....+++++++++|
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~-~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g---~~i~~~~d~~eav~~aD 253 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGA-AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNG---GSLRFSTDKILAAQDAD 253 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHH-HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHS---CEEEEESCHHHHTTTCS
T ss_pred CCCCEEEEECCCCcchHHHHHHHH-HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcC---CEEEEECCHHHHhcCCC
Confidence 789999999988 7889998886 57999999988754222 1222111111111111 12334579999999999
Q ss_pred EEEEcC--CCCcc-----------cccccCHHHHhcCCCCcEEEEcC
Q 019387 239 VISLHP--VLDKT-----------TYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 239 iV~l~~--pl~~~-----------t~~li~~~~l~~mk~ga~lINva 272 (342)
+|..-+ ..+++ ...-++.+.++.+|++++|.=+.
T Consensus 254 VVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 254 VIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp EEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred EEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 998742 22221 12457899999999999988875
No 222
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.99 E-value=0.0016 Score=61.51 Aligned_cols=69 Identities=22% Similarity=0.304 Sum_probs=50.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhc-CCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~a-fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~ 241 (342)
.+|||||+|.||+..++.+.+. -+++++ ++|++++.. +.+.+.+ + ...+.++++++. +.|+|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~~~~~-------~-----~~~~~~~~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAAL-KAAVERT-------G-----ARGHASLTDMLAQTDADIVI 80 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHHH-------C-----CEEESCHHHHHHHCCCSEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEEE
Confidence 4899999999999999987433 378866 789887542 2222222 1 234579999997 799999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+|+|..
T Consensus 81 i~tp~~ 86 (354)
T 3q2i_A 81 LTTPSG 86 (354)
T ss_dssp ECSCGG
T ss_pred ECCCcH
Confidence 999953
No 223
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.99 E-value=0.0017 Score=61.53 Aligned_cols=67 Identities=19% Similarity=0.299 Sum_probs=49.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~ 241 (342)
.+|||||+|.||+..++.+ +.. ++++. ++|+.++.. +. ...+ +...+.++++++. +.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~l~av~d~~~~~~-~~-a~~~------------g~~~~~~~~~ll~~~~~D~V~ 70 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLA-SAADNLEVHGVFDILAEKR-EA-AAQK------------GLKIYESYEAVLADEKVDAVL 70 (359)
T ss_dssp EEEEEECCSHHHHHHHHHH-HTSTTEEEEEEECSSHHHH-HH-HHTT------------TCCBCSCHHHHHHCTTCCEEE
T ss_pred CcEEEECcCHHHHHHHHHH-HhCCCcEEEEEEcCCHHHH-HH-HHhc------------CCceeCCHHHHhcCCCCCEEE
Confidence 4799999999999999987 455 78887 578876542 11 1111 1234579999998 789999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+|+|..
T Consensus 71 i~tp~~ 76 (359)
T 3e18_A 71 IATPND 76 (359)
T ss_dssp ECSCGG
T ss_pred EcCCcH
Confidence 999953
No 224
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.99 E-value=0.0034 Score=58.28 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=47.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
++|+|||.|.||..+|..|++ -| .+|..||+.++. .+.....+........ ...... ..++ +.+++||+|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~-~g~~~~V~l~d~~~~~-~~~~~~~l~~~~~~~~-~~~~~~-~~d~-~~~~~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA-QGVADDYVFIDANEAK-VKADQIDFQDAMANLE-AHGNIV-INDW-AALADADVVIST 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSSHHH-HHHHHHHHHHHGGGSS-SCCEEE-ESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEcCCHHH-HHHHHHHHHhhhhhcC-CCeEEE-eCCH-HHhCCCCEEEEe
Confidence 479999999999999998753 35 699999998643 2222111110000000 011111 2456 677899999999
Q ss_pred CCC
Q 019387 244 PVL 246 (342)
Q Consensus 244 ~pl 246 (342)
+|.
T Consensus 77 v~~ 79 (309)
T 1hyh_A 77 LGN 79 (309)
T ss_dssp CSC
T ss_pred cCC
Confidence 985
No 225
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.97 E-value=0.073 Score=50.07 Aligned_cols=114 Identities=13% Similarity=0.169 Sum_probs=71.9
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|++|++||= +++.++.+..+ ..||++|.+..|..-...+...+.........+ ..+....+++ .++++|+|
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~-av~~aDvv 246 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFL 246 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHC---CEEEEECCGG-GGTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CEEEEECChh-HHcCCCEE
Confidence 478999999996 67888888886 579999999887532211111110000001111 1223356888 99999999
Q ss_pred EEcC--CCC--ccc----------ccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 241 SLHP--VLD--KTT----------YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 241 ~l~~--pl~--~~t----------~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
..-+ ... ++. ..-++.+.++.+|++++|.=+. ||.=|+.+
T Consensus 247 ytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~e 303 (339)
T 4a8t_A 247 YTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 303 (339)
T ss_dssp EECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred EecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 8633 111 111 2557888999999999988875 67666654
No 226
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.96 E-value=0.042 Score=52.04 Aligned_cols=107 Identities=17% Similarity=0.213 Sum_probs=70.8
Q ss_pred ccCCCeEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~L~gktvgIvG~G--~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.+.|.+|++||=| +++++.+..+ ..||++|.+..|..-...+...+.........+ ..+....++++.++++|+
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~-~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 248 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTG-AILGVNIHIVAPKALFPTEETQNIAKGFAEKSG---AKLVITDDLDEGLKGSNV 248 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSE
T ss_pred CcCCeEEEEECCCccchHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhcCCCE
Confidence 4789999999986 9999999987 578999999887542211111110000011111 123345789999999999
Q ss_pred EEEcCC--CCc---c------cccccCHHHHhcCC---CCcEEEEcC
Q 019387 240 ISLHPV--LDK---T------TYHLINKERLATMK---KEAILVNCS 272 (342)
Q Consensus 240 V~l~~p--l~~---~------t~~li~~~~l~~mk---~ga~lINva 272 (342)
|..-.- ... + ...-++.+.++.+| ++++|.-+.
T Consensus 249 vytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 249 VYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp EEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred EEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 977433 111 0 23567899999999 899998875
No 227
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.95 E-value=0.041 Score=51.16 Aligned_cols=109 Identities=15% Similarity=0.236 Sum_probs=72.1
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEE
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
.+.|++|++||= +++.++.+..+ ..||++|.+..|..-...+. +... .....+....++++.++++|+|
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~-------~~~~--~~g~~v~~~~d~~eav~~aDvv 220 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAA-RILDFKLQLSTPPGYALDAK-------LVDA--ESAPFYQVFDDPNEACKGADLV 220 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCGGGCCCGG-------GSCG--GGGGGEEECSSHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHH-HHcCCEEEEECCcccCCCHH-------HHHH--HcCCeEEEEcCHHHHhcCCCEE
Confidence 378999999995 57888888876 57899999988743211111 0000 0112233457999999999999
Q ss_pred EEcC----CCCc--------ccccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 241 SLHP----VLDK--------TTYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 241 ~l~~----pl~~--------~t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
..-. .... -...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 221 yt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 275 (309)
T 4f2g_A 221 TTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTAG 275 (309)
T ss_dssp EECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCHH
T ss_pred EecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecHH
Confidence 7643 1100 023557899999999999998875 67666554
No 228
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.94 E-value=0.0022 Score=60.28 Aligned_cols=70 Identities=23% Similarity=0.268 Sum_probs=49.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.|.+.-++++. ++|+.++. .+.+.+.+ +. ...+.++++++. +.|+|++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~-------~~----~~~~~~~~~ll~~~~~D~V~i 70 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDR-LREMKEKL-------GV----EKAYKDPHELIEDPNVDAVLV 70 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHH-HHHHHHHH-------TC----SEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHH-HHHHHHHh-------CC----CceeCCHHHHhcCCCCCEEEE
Confidence 3799999999999999987433478877 58987653 23222222 11 013579999998 7999999
Q ss_pred cCCCC
Q 019387 243 HPVLD 247 (342)
Q Consensus 243 ~~pl~ 247 (342)
|+|..
T Consensus 71 ~tp~~ 75 (344)
T 3ezy_A 71 CSSTN 75 (344)
T ss_dssp CSCGG
T ss_pred cCCCc
Confidence 99953
No 229
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.93 E-value=0.0026 Score=59.83 Aligned_cols=72 Identities=21% Similarity=0.262 Sum_probs=50.4
Q ss_pred CeEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~-~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV~ 241 (342)
.+|||||+|.||+..++.+. +.-++++. ++|+.++. .+.+.+.+ +. ....+.++++++.+ .|+|+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~-~~~~~~~~-------g~---~~~~~~~~~~ll~~~~~D~V~ 71 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEA-AQKVVEQY-------QL---NATVYPNDDSLLADENVDAVL 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHH-HHHHHHHT-------TC---CCEEESSHHHHHHCTTCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEEE
Confidence 37999999999999999874 23478877 67887653 23222222 11 12245799999986 89999
Q ss_pred EcCCCCc
Q 019387 242 LHPVLDK 248 (342)
Q Consensus 242 l~~pl~~ 248 (342)
+|+|...
T Consensus 72 i~tp~~~ 78 (344)
T 3mz0_A 72 VTSWGPA 78 (344)
T ss_dssp ECSCGGG
T ss_pred ECCCchh
Confidence 9998543
No 230
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.92 E-value=0.00092 Score=63.99 Aligned_cols=39 Identities=26% Similarity=0.490 Sum_probs=35.1
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
..+.||+|+|+|.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa-~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAA-KEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCCC
Confidence 457899999999999999999996 899999999998764
No 231
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.91 E-value=0.0037 Score=58.38 Aligned_cols=122 Identities=13% Similarity=0.151 Sum_probs=66.3
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|+|||.|.||..+|..|+ .-|. +|..+|+.++.. +.....+..... .. ....... .+. +.+++||+|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~-~~g~~~~V~l~D~~~~~~-~~~~~~l~~~~~-~~-~~~~i~~-~d~-~~~~~aDvViia 74 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALL-MKGFAREMVLIDVDKKRA-EGDALDLIHGTP-FT-RRANIYA-GDY-ADLKGSDVVIVA 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGG-GS-CCCEEEE-CCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHHHHHhhhh-hc-CCcEEEe-CCH-HHhCCCCEEEEc
Confidence 37999999999999999875 4466 999999986432 221111100000 00 0111111 243 457899999999
Q ss_pred CCCCcccccc-----------cCHHH---HhcCCCCcEEEEcCCCcccCHHHHHHHH--HcCCceEE
Q 019387 244 PVLDKTTYHL-----------INKER---LATMKKEAILVNCSRGPVIDEVALVEHL--KQNPMFRV 294 (342)
Q Consensus 244 ~pl~~~t~~l-----------i~~~~---l~~mk~ga~lINvaRG~~vd~~aL~~aL--~~g~i~~a 294 (342)
+|... ..+. +-.+. +....+++.+|+++-+--+....+.+.. ...++.|.
T Consensus 75 v~~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 75 AGVPQ-KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CCCCC-CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred cCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 98643 2111 00222 2222478899888654433223232322 23456554
No 232
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.91 E-value=0.0033 Score=59.41 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=48.9
Q ss_pred CCeEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEE
Q 019387 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 165 gktvgIvG~G~IG~-~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV 240 (342)
-.+|||||+|.||+ ..++.|.+.-++++. ++|+.++. .+.+.+.+ + ...+.++++++. +.|+|
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~a~~~-------g-----~~~~~~~~~ll~~~~~D~V 93 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDR-AKRFTERF-------G-----GEPVEGYPALLERDDVDAV 93 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHH-HHHHHHHH-------C-----SEEEESHHHHHTCTTCSEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHH-HHHHHHHc-------C-----CCCcCCHHHHhcCCCCCEE
Confidence 35899999999999 788887433378876 67887643 23322222 1 223479999997 58999
Q ss_pred EEcCCCC
Q 019387 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~~pl~ 247 (342)
++|+|..
T Consensus 94 ~i~tp~~ 100 (350)
T 3rc1_A 94 YVPLPAV 100 (350)
T ss_dssp EECCCGG
T ss_pred EECCCcH
Confidence 9999953
No 233
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.90 E-value=0.11 Score=49.37 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=67.6
Q ss_pred cccCCCeEEEEec--CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 161 NLLKGQTVGVIGA--GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 161 ~~L~gktvgIvG~--G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
..+.|.+|++||= +++.++.+..+ ..||++|.+..|..-...+...+....+....+ ..+....++++.++++|
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~-~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g---~~v~~~~d~~eav~~aD 252 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGA-AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTG---GKITLTENVAEGVQGCD 252 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCS
T ss_pred CCcCceEEEecCCCCcccchHHHHHH-HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcC---CcceeccCHHHHhccCc
Confidence 4688999999995 48999999886 689999999887532111111111101111111 12334578999999999
Q ss_pred EEEEcCCCC----cc---------cccccCHHHHhcC-CCCcEEEEcC
Q 019387 239 VISLHPVLD----KT---------TYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 239 iV~l~~pl~----~~---------t~~li~~~~l~~m-k~ga~lINva 272 (342)
+|..-.-.. ++ ...-++.+.++.+ |++++|.-+.
T Consensus 253 vvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 253 FLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp EEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 997543221 11 1234688888764 7788887654
No 234
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.86 E-value=0.00024 Score=65.65 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=61.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV~l~~ 244 (342)
.+|+|||.|+||..+|..|+ .-|.+|.+++++.+.. + .....+..+... ..+..+.+ ..+|+|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~-~~g~~V~~~~r~~~~~-~--------~~~~~g~~~~~~--~~~~~~~~~~~~D~vilav 70 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ-QSLPHTTLIGRHAKTI-T--------YYTVPHAPAQDI--VVKGYEDVTNTFDVIIIAV 70 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHCTTCEEEESSCEEE-E--------EESSTTSCCEEE--EEEEGGGCCSCEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHH-HCCCeEEEEEeccCcE-E--------EEecCCeeccce--ecCchHhcCCCCCEEEEeC
Confidence 57999999999999999985 4578999999875321 0 011112111111 11233333 7899999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCcccC
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd 278 (342)
|.. ++...+.. .-..++++..+|.+.-|=-..
T Consensus 71 k~~-~~~~~l~~-l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 71 KTH-QLDAVIPH-LTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp CGG-GHHHHGGG-HHHHEEEEEEEEECCSSCCCG
T ss_pred Ccc-CHHHHHHH-HHHhhCCCCEEEEeccCcccH
Confidence 853 44444432 233456788999988775443
No 235
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.86 E-value=0.0019 Score=61.34 Aligned_cols=72 Identities=22% Similarity=0.238 Sum_probs=48.0
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.++|+|+|.|.+|+.+|+.|++ ..+|.+.|+..+.. ++..+ .... .........++.++++++|+|+.|+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~--~~~v~~~~~~~~~~-~~~~~----~~~~---~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD--EFDVYIGDVNNENL-EKVKE----FATP---LKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHH-HHHTT----TSEE---EECCTTCHHHHHHHHTTCSEEEECC
T ss_pred ccEEEEECCCHHHHHHHHHHhc--CCCeEEEEcCHHHH-HHHhc----cCCc---EEEecCCHHHHHHHHhCCCEEEEec
Confidence 3479999999999999999843 46888888876432 22111 0000 0111223356788999999999999
Q ss_pred CC
Q 019387 245 VL 246 (342)
Q Consensus 245 pl 246 (342)
|.
T Consensus 86 p~ 87 (365)
T 3abi_A 86 PG 87 (365)
T ss_dssp CG
T ss_pred CC
Confidence 84
No 236
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.86 E-value=0.0017 Score=56.95 Aligned_cols=96 Identities=15% Similarity=0.128 Sum_probs=56.5
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcc--ccccCCHHHH-hhcCCEEEEc
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEV-LREADVISLH 243 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l-l~~aDiV~l~ 243 (342)
+|.|+|+|.+|+.+|+.| ...|.+|+++|++++.. +.....+ +..... ......++++ +.++|+|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~-~~l~~~~-------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSM-LSRKYGVVIINKDRELC-EEFAKKL-------KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECCHHHHHHHHHHH-HHTTCCEEEEESCHHHH-HHHHHHS-------SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHHHc-------CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 689999999999999998 57899999999887542 2211110 110000 0011234444 6789999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
+|.... +++-....+.+.+...+|-..+
T Consensus 73 ~~~d~~--n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 73 TPRDEV--NLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CSCHHH--HHHHHHHHHHTSCCCEEEECCC
T ss_pred cCCcHH--HHHHHHHHHHHcCCCeEEEEEe
Confidence 985433 3333334444333444444333
No 237
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.85 E-value=0.0033 Score=61.68 Aligned_cols=115 Identities=13% Similarity=0.159 Sum_probs=73.8
Q ss_pred CCeEEEEecCHH--HHHHHHHHHh--c-CCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 165 GQTVGVIGAGRI--GSAYARMMVE--G-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 165 gktvgIvG~G~I--G~~vA~~l~~--a-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
+.+|+|||-|.+ |..++..|++ . .| +|..||..++. ++.... ....+.. .+..+....++++.+++||+
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~-le~~~~-~~~~l~~---~~~~I~~TtD~~eAl~dADf 78 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEA-AQKNEV-IGNHSGN---GRWRYEAVSTLKKALSAADI 78 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHH-HHHHHH-HHTTSTT---SCEEEEEESSHHHHHTTCSE
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHH-HHHHHH-HHHHHhc---cCCeEEEECCHHHHhcCCCE
Confidence 468999999998 5788877653 2 35 99999998743 222111 1111111 33445556799999999999
Q ss_pred EEEcCCCC-----------cccccccCH------------------------HHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 019387 240 ISLHPVLD-----------KTTYHLINK------------------------ERLATMKKEAILVNCSRGPVIDEVALVE 284 (342)
Q Consensus 240 V~l~~pl~-----------~~t~~li~~------------------------~~l~~mk~ga~lINvaRG~~vd~~aL~~ 284 (342)
|+++++.. |.-.|+... +.+....|++.+||++-.--+-..++.+
T Consensus 79 VI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k 158 (450)
T 3fef_A 79 VIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYK 158 (450)
T ss_dssp EEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHH
T ss_pred EEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHH
Confidence 99999743 444555322 2344456899999998765444444444
Q ss_pred H
Q 019387 285 H 285 (342)
Q Consensus 285 a 285 (342)
.
T Consensus 159 ~ 159 (450)
T 3fef_A 159 V 159 (450)
T ss_dssp H
T ss_pred H
Confidence 3
No 238
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.83 E-value=0.0073 Score=62.84 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=91.7
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHh---hhhh---hhhccCC--CCccccccCCHHHHhhcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVT---AYGQ---FLKANGE--QPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~---~~~~---~~~~~~~--~~~~~~~~~~l~~ll~~a 237 (342)
++|||||.|.||..+|..++ ..|.+|+.+|..++........ .+.. ....... .........++++ +++|
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a-~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~a 394 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-LSTV 394 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-GGSC
T ss_pred cEEEEEcccHHHHHHHHHHH-hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-HhhC
Confidence 68999999999999999975 6799999999987642211100 0000 0000111 1111222344444 6899
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCCCCC--CCcccccc
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEVTE--LGFSSFKH 311 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~~EP--~~~~~tPh 311 (342)
|+|+=++|-+-+.+.-+-++.=+.++++++|-..+.+ +.-..|.++++ ..-+.+++=-|.+-| |-+-+.||
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfnP~~~m~LVEvi~g 467 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFSPAHVMRLLEVIPS 467 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCSSTTTCCEEEEEEC
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccCCCCCCceEEEecC
Confidence 9999999988887777767777788999988876544 56667777764 455677887776544 43444444
No 239
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.82 E-value=0.0032 Score=59.21 Aligned_cols=76 Identities=20% Similarity=0.369 Sum_probs=47.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
++|+|||.|.+|..+|..|+ .-|. +|..||+..+.. +.............. .+.......++ +.+++||+|+++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la-~~g~~~V~L~Di~~~~l-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLG-QKDLGDVYMFDIIEGVP-QGKALDLNHCMALIG-SPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECCHHHH-HHHHHHHHhHhhccC-CCCEEEECCCH-HHHCCCCEEEEcC
Confidence 68999999999999999875 4466 899999986432 221100000000000 11122233566 6789999999998
Q ss_pred C
Q 019387 245 V 245 (342)
Q Consensus 245 p 245 (342)
+
T Consensus 91 g 91 (328)
T 2hjr_A 91 G 91 (328)
T ss_dssp S
T ss_pred C
Confidence 4
No 240
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.82 E-value=0.0024 Score=59.34 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=66.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|+|+|.|.+|..+|..|+ ..|. +|..+|+..+. .+........-. .. ........ .+. +.+++||+|+++
T Consensus 1 mkI~VIGaG~vG~~la~~la-~~g~~~eV~L~D~~~~~-~~~~~~~l~~~~-~~-~~~~~i~~-~~~-~a~~~aDvVIi~ 74 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALV-LRGSCSELVLVDRDEDR-AQAEAEDIAHAA-PV-SHGTRVWH-GGH-SELADAQVVILT 74 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHH-HHHHHHHHTTSC-CT-TSCCEEEE-ECG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCCHHH-HHHHHHhhhhhh-hh-cCCeEEEE-CCH-HHhCCCCEEEEc
Confidence 37999999999999999874 5577 99999998642 222111110000 00 01111211 343 468899999999
Q ss_pred CCCCcc-----------cccccCH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 019387 244 PVLDKT-----------TYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 244 ~pl~~~-----------t~~li~~--~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~a 294 (342)
.+.... +..++.. ..+....+++++|+++-+.-+....+.+.....++.|.
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 954221 1111110 23333458899999765543334444444444455444
No 241
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.81 E-value=0.0022 Score=59.96 Aligned_cols=70 Identities=11% Similarity=0.173 Sum_probs=47.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|++++.. +.+. ...+.. ..+.++++++. +.|+|++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~-~~~a-------~~~~~~----~~~~~~~~ll~~~~~D~V~i 73 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESA-QAFA-------NKYHLP----KAYDKLEDMLADESIDVIYV 73 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTT-CC----------CCCCS----CEESCHHHHHTCTTCCEEEE
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHH-------HHcCCC----cccCCHHHHhcCCCCCEEEE
Confidence 4899999999999999887443467766 578876532 1111 111110 13579999998 7999999
Q ss_pred cCCCC
Q 019387 243 HPVLD 247 (342)
Q Consensus 243 ~~pl~ 247 (342)
|+|..
T Consensus 74 ~tp~~ 78 (329)
T 3evn_A 74 ATINQ 78 (329)
T ss_dssp CSCGG
T ss_pred CCCcH
Confidence 99953
No 242
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.80 E-value=0.00091 Score=60.41 Aligned_cols=96 Identities=18% Similarity=0.237 Sum_probs=61.6
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhccCCCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|+|.|.+|..+|+.|+ ..|. ++..+|+..- .+.+...+...... ....
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La-~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n---p~~~ 102 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLA-SAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN---PHIA 102 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC---TTSE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHH-HcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC---CCcE
Confidence 4688999999999999999999985 6787 8889998751 11111111111100 0000
Q ss_pred ccc-c---ccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 222 VTW-K---RASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 222 ~~~-~---~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
... . ...++++++.++|+|+.+.+ +.+++.++++...+.
T Consensus 103 v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~ 145 (249)
T 1jw9_B 103 ITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA 145 (249)
T ss_dssp EEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH
T ss_pred EEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc
Confidence 000 0 01245678899999999986 577888888765553
No 243
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.80 E-value=0.0089 Score=56.48 Aligned_cols=113 Identities=17% Similarity=0.124 Sum_probs=66.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|++++. .+.+.+.+ +.. .....+.++++++. +.|+|++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~-~~~~a~~~-------~~~-~~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEK-AKAFATAN-------NYP-ESTKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHH-HHHHHHHT-------TCC-TTCEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHHHHHh-------CCC-CCCeeeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999887433367765 68887653 22222222 110 01123578999997 5999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCce
Q 019387 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga-~lINv-aRG~~vd~~aL~~aL~~g~i~ 292 (342)
|+|.. .+. +-....++.|. +++.- ---.+-+-+.|.++.++..+.
T Consensus 78 ~tp~~--~h~---~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 78 PLPTS--LHV---EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp CCCGG--GHH---HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred cCChH--HHH---HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 99842 222 22334455665 44432 111223346677777665443
No 244
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.80 E-value=0.03 Score=52.09 Aligned_cols=111 Identities=18% Similarity=0.304 Sum_probs=73.2
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 237 (342)
.+.|++|+++|= |++.++.+..+ ..| |++|.+..|..-...+...+ .....+ ..+....+++++++++
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~~~----~~~~~g---~~~~~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQAL-AKFDGNRFYFIAPDALAMPQYILD----MLDEKG---IAWSLHSSIEEVMAEV 222 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHH----HHHHTT---CCEEECSCGGGTTTTC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCcccccCHHHHH----HHHHcC---CeEEEEcCHHHHhcCC
Confidence 378999999998 59999999987 578 99999988754321111111 011112 1233457899999999
Q ss_pred CEEEEcCCCCc----cc------ccccCHHHHhcCCCCcEEEEcC-CCcccCHH
Q 019387 238 DVISLHPVLDK----TT------YHLINKERLATMKKEAILVNCS-RGPVIDEV 280 (342)
Q Consensus 238 DiV~l~~pl~~----~t------~~li~~~~l~~mk~ga~lINva-RG~~vd~~ 280 (342)
|+|..-.-..+ +. ..-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 223 Dvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI~~e 276 (310)
T 3csu_A 223 DILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATD 276 (310)
T ss_dssp SEEEECC-----------------CCBCGGGGTTCCTTCEEECCSCCSSSBCHH
T ss_pred CEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCeecHH
Confidence 99976644322 11 3556889999999999888875 65555544
No 245
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.78 E-value=0.0029 Score=59.72 Aligned_cols=104 Identities=16% Similarity=0.264 Sum_probs=65.1
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc------------------hhHHHHHHhhhhhhhhccCCCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ------------------ATRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|... ..+.+...+...... ....
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La-~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in---P~v~ 105 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF---PLMD 105 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC---TTCE
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC---CCCE
Confidence 4689999999999999999999985 6677 677887643 011111111111110 0000
Q ss_pred cc-cc------------------ccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 222 VT-WK------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 222 ~~-~~------------------~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
.. +. ....++++++++|+|+.|+. +.+++.+++...... |.-+|+.+
T Consensus 106 v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~~---~~plI~aa 171 (340)
T 3rui_A 106 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 171 (340)
T ss_dssp EEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHHc---CCcEEEee
Confidence 00 00 01235688999999999985 678999888876553 44566653
No 246
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.77 E-value=0.0072 Score=57.34 Aligned_cols=66 Identities=14% Similarity=0.200 Sum_probs=47.2
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEE
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV 240 (342)
.+|||||+|.||+. .++.+ +.. +++|. ++|+.++...+ .+ . ....+.++++++. +.|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~~----~~-------~----~~~~~~~~~~ll~~~~~D~V 71 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLI-RSVPGLNLAFVASRDEEKVKR----DL-------P----DVTVIASPEAAVQHPDVDLV 71 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTSTTEEEEEEECSCHHHHHH----HC-------T----TSEEESCHHHHHTCTTCSEE
T ss_pred ceEEEECCCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHHh----hC-------C----CCcEECCHHHHhcCCCCCEE
Confidence 47999999999997 67766 444 78886 67887743211 11 0 1224579999998 78999
Q ss_pred EEcCCCC
Q 019387 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~~pl~ 247 (342)
++|+|..
T Consensus 72 ~i~tp~~ 78 (364)
T 3e82_A 72 VIASPNA 78 (364)
T ss_dssp EECSCGG
T ss_pred EEeCChH
Confidence 9999853
No 247
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.74 E-value=0.0046 Score=57.97 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=47.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
++|+|||.|.+|..+|..|+ .-|. +|..+|...+. .+.............. .........++ +.+++||+|+++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la-~~g~~~v~L~Di~~~~-l~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV-QKNLGDVVLFDIVKNM-PHGKALDTSHTNVMAY-SNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSH-HHHHHHHHHTHHHHHT-CCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCHHH-HHHHHHHHHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEeC
Confidence 58999999999999999875 4465 89999987643 2221111101000001 11122233566 6789999999998
Q ss_pred C
Q 019387 245 V 245 (342)
Q Consensus 245 p 245 (342)
+
T Consensus 81 g 81 (322)
T 1t2d_A 81 G 81 (322)
T ss_dssp S
T ss_pred C
Confidence 3
No 248
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.74 E-value=0.0039 Score=58.31 Aligned_cols=103 Identities=15% Similarity=0.170 Sum_probs=63.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|||+|+|+||+.+++.+.+.-++++. ++|+++.... . .+.....++++++.++|+|++|+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~--------------~---~gv~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT--------------K---TPVFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS--------------S---SCEEEGGGGGGTTTTCSEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhh--------------c---CCCceeCCHHHHhcCCCEEEEcC
Confidence 3799999999999999987433367765 6787753210 0 11223457777778899999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCcc-cC-H-HHHHHHHHcCC
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-ID-E-VALVEHLKQNP 290 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd-~-~aL~~aL~~g~ 290 (342)
|.... -+.....++.|.-+|.-.-..+ +. . +.|.++.+++.
T Consensus 67 p~~~h-----~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 67 GSATD-----IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp CTTTH-----HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred CcHHH-----HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 85322 1233455666776665443332 22 2 45566665544
No 249
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.73 E-value=0.0044 Score=58.63 Aligned_cols=72 Identities=15% Similarity=0.302 Sum_probs=50.6
Q ss_pred CeEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~-~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~ 241 (342)
.+|||||+|.||+..++.+. +.-++++. ++|+.++.. +.+.+.+ +. ....+.++++++. +.|+|+
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~---~~~~~~~~~~ll~~~~~D~V~ 92 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRA-QAALDKY-------AI---EAKDYNDYHDLINDKDVEVVI 92 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHH-HHHHHHH-------TC---CCEEESSHHHHHHCTTCCEEE
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEEE
Confidence 48999999999999999874 23478877 689887542 3322222 10 1224579999997 489999
Q ss_pred EcCCCCc
Q 019387 242 LHPVLDK 248 (342)
Q Consensus 242 l~~pl~~ 248 (342)
+|+|...
T Consensus 93 i~tp~~~ 99 (357)
T 3ec7_A 93 ITASNEA 99 (357)
T ss_dssp ECSCGGG
T ss_pred EcCCcHH
Confidence 9999543
No 250
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.0026 Score=62.77 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=59.3
Q ss_pred cccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC--ccccccCCHHHHhhc
Q 019387 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLRE 236 (342)
Q Consensus 159 ~~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ll~~ 236 (342)
.+..+.+++|+|+|.|.+|+.+++.|++.-|.+|.+++++.+.. +..... .+... .......++.+++.+
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~~-------~~~~~~~~D~~d~~~l~~~l~~ 88 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANA-QALAKP-------SGSKAISLDVTDDSALDKVLAD 88 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHGG-------GTCEEEECCTTCHHHHHHHHHT
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHh-------cCCcEEEEecCCHHHHHHHHcC
Confidence 44678899999999999999999998543478999999986532 221110 01100 011112356778899
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
+|+|+.|+|.... .-+.. ..++.|..+++++
T Consensus 89 ~DvVIn~tp~~~~--~~v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 89 NDVVISLIPYTFH--PNVVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp SSEEEECSCGGGH--HHHHH---HHHHHTCEEEECS
T ss_pred CCEEEECCchhhh--HHHHH---HHHhcCCEEEEee
Confidence 9999999985321 11111 2234566777764
No 251
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.72 E-value=0.0022 Score=59.54 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=60.0
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|||||+|+||+.+++.+.+.-++++. ++|+.++.. +. .+.. +....++.+. .++|+|++|+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~-~~-----------~g~~---~~~~~~l~~~-~~~DvViiat 73 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEV-PF-----------ELQP---FRVVSDIEQL-ESVDVALVCS 73 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------------------CCTT---SCEESSGGGS-SSCCEEEECS
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHH-HH-----------cCCC---cCCHHHHHhC-CCCCEEEECC
Confidence 4899999999999999987443578887 588876532 10 1111 1223455555 7899999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCC--C-cccCHHHHHHHHHcCC
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSR--G-PVIDEVALVEHLKQNP 290 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaR--G-~~vd~~aL~~aL~~g~ 290 (342)
|.. ++. +.....++.|.-++...- + ...+.+.|.++.++..
T Consensus 74 p~~--~h~---~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 74 PSR--EVE---RTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp CHH--HHH---HHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred Cch--hhH---HHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 842 221 223344556766665421 2 2223355666665543
No 252
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.72 E-value=0.0088 Score=54.65 Aligned_cols=104 Identities=16% Similarity=0.207 Sum_probs=66.5
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
.++++.|+|.|.+|+.++..| ...|+ +|.+++|..++ .+.+.+.++ . .+ ..++. +.++|+|+.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L-~~~G~~~i~v~nRt~~k-a~~la~~~~-------~---~~--~~~~~--~~~~DivIn 181 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAF-KNSGFEKLKIYARNVKT-GQYLAALYG-------Y---AY--INSLE--NQQADILVN 181 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHH-HHTTCCCEEEECSCHHH-HHHHHHHHT-------C---EE--ESCCT--TCCCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHH-HHHHHHHcC-------C---cc--chhhh--cccCCEEEE
Confidence 478999999999999999997 57897 79999998653 222222211 0 11 11222 468999999
Q ss_pred cCCCCcccc-----cccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 019387 243 HPVLDKTTY-----HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 243 ~~pl~~~t~-----~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~ 288 (342)
++|..-... -.+..+. ++++.+++|+.-.+.. + .|.+.-++
T Consensus 182 aTp~gm~~~~~~~~~~~~~~~---l~~~~~v~DlvY~P~~-T-~ll~~A~~ 227 (271)
T 1npy_A 182 VTSIGMKGGKEEMDLAFPKAF---IDNASVAFDVVAMPVE-T-PFIRYAQA 227 (271)
T ss_dssp CSSTTCTTSTTTTSCSSCHHH---HHHCSEEEECCCSSSS-C-HHHHHHHH
T ss_pred CCCCCccCccccCCCCCCHHH---cCCCCEEEEeecCCCC-C-HHHHHHHH
Confidence 999754211 1244343 4568899999876543 3 45444444
No 253
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.71 E-value=0.18 Score=47.22 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=74.4
Q ss_pred cccCCCeEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchh--HHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc
Q 019387 161 NLLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 161 ~~L~gktvgIvG~G--~IG~~vA~~l~~afg~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 236 (342)
..+.|.+|++||=| ++.++.+..+ ..||++|.+..|..-. ..+...+.........+ ....+....++++.+++
T Consensus 157 ~~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~-~g~~v~~~~d~~eav~~ 234 (328)
T 3grf_A 157 NGFKGIKFAYCGDSMNNVTYDLMRGC-ALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHG-TGGSIKIFHDCKKGCEG 234 (328)
T ss_dssp TTGGGCCEEEESCCSSHHHHHHHHHH-HHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHT-CCCEEEEESSHHHHHTT
T ss_pred cccCCcEEEEeCCCCcchHHHHHHHH-HHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhcc-CCCeEEEEcCHHHHhcC
Confidence 35889999999986 8888988886 5789999998875422 11111111000011100 01123345799999999
Q ss_pred CCEEEEc----CC-CCcc--------cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 237 ADVISLH----PV-LDKT--------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 237 aDiV~l~----~p-l~~~--------t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
+|+|..- +. ..++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 235 aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~e 294 (328)
T 3grf_A 235 VDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTAS 294 (328)
T ss_dssp CSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHH
T ss_pred CCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHH
Confidence 9999863 22 1111 12457899999999999998875 77666554
No 254
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.70 E-value=0.0036 Score=59.35 Aligned_cols=68 Identities=10% Similarity=0.133 Sum_probs=47.7
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC--CEE
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA--DVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a--DiV 240 (342)
.+|||||+|.||+. .++.| +.. ++++. ++|+.++.. +.+.+.+ + ....+.++++++.+. |+|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~-~~~a~~~-------~----~~~~~~~~~~ll~~~~vD~V 72 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSL-LQMQDIRIVAACDSDLERA-RRVHRFI-------S----DIPVLDNVPAMLNQVPLDAV 72 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTCTTEEEEEEECSSHHHH-GGGGGTS-------C----SCCEESSHHHHHHHSCCSEE
T ss_pred ceEEEECCCHHHHHHHHHHH-HhCCCcEEEEEEcCCHHHH-HHHHHhc-------C----CCcccCCHHHHhcCCCCCEE
Confidence 48999999999996 78887 454 78877 689877542 2211111 1 122457999999865 999
Q ss_pred EEcCCC
Q 019387 241 SLHPVL 246 (342)
Q Consensus 241 ~l~~pl 246 (342)
++|+|.
T Consensus 73 ~i~tp~ 78 (359)
T 3m2t_A 73 VMAGPP 78 (359)
T ss_dssp EECSCH
T ss_pred EEcCCc
Confidence 999994
No 255
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.67 E-value=0.0038 Score=61.72 Aligned_cols=128 Identities=12% Similarity=0.244 Sum_probs=76.6
Q ss_pred CCeEEEEecCHH--HHHHHHHHHh--cC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 165 GQTVGVIGAGRI--GSAYARMMVE--GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 165 gktvgIvG~G~I--G~~vA~~l~~--af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
..+|+|||.|.+ |.++|..|++ ++ |.+|..||+..+. .+............ ...+..+....++++.+++||+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~-~~~~~~I~~ttD~~eal~dAD~ 80 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEER-LDAILTIAKKYVEE-VGADLKFEKTMNLDDVIIDADF 80 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHH-HHHHHHHHHHHHHH-TTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHH-HHHHHHHHHHHhcc-CCCCcEEEEECCHHHHhCCCCE
Confidence 358999999997 5666766642 44 7899999998753 22211111111111 1123344445688888999999
Q ss_pred EEEcCCCC-----------cccccccC----------------------------HHHHhcCCCCcEEEEcCCCcccCHH
Q 019387 240 ISLHPVLD-----------KTTYHLIN----------------------------KERLATMKKEAILVNCSRGPVIDEV 280 (342)
Q Consensus 240 V~l~~pl~-----------~~t~~li~----------------------------~~~l~~mk~ga~lINvaRG~~vd~~ 280 (342)
|++++|.. +.-.+++. .+.+....|+|++||++----+-..
T Consensus 81 VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~ 160 (480)
T 1obb_A 81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTT 160 (480)
T ss_dssp EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH
T ss_pred EEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 99999741 01111111 1344555689999999876655555
Q ss_pred HHHHHHHcCCceEEE
Q 019387 281 ALVEHLKQNPMFRVG 295 (342)
Q Consensus 281 aL~~aL~~g~i~~aa 295 (342)
++.+ +...++.|.+
T Consensus 161 ~~~k-~p~~rviG~c 174 (480)
T 1obb_A 161 LVTR-TVPIKAVGFC 174 (480)
T ss_dssp HHHH-HSCSEEEEEC
T ss_pred HHHH-CCCCcEEecC
Confidence 5555 4455666654
No 256
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.67 E-value=0.0032 Score=60.53 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=67.4
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
--++-|+|.|.+|+++|+.+ +.+|++|+++|++++.. + .+-+..+|-++...
T Consensus 204 ~~rL~IfGAGhva~ala~~a-~~lg~~V~v~D~R~~~~--------------------------~-~~~fp~a~~~~~~~ 255 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQG-AFLGYRVTVCDARPVFA--------------------------T-TARFPTADEVVVDW 255 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHH-HHTTCEEEEEESCTTTS--------------------------C-TTTCSSSSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEECCchhhc--------------------------c-cccCCCceEEEeCC
Confidence 34899999999999999985 79999999999876421 1 11234566555444
Q ss_pred CCCcccccccCHHHHhc------CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEE
Q 019387 245 VLDKTTYHLINKERLAT------MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVG 295 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~------mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aa 295 (342)
| .+.+.. +.+++++|=..++.-.|...|.++|+++.....+
T Consensus 256 p----------~~~~~~~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 256 P----------HRYLAAQAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp H----------HHHHHHHHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred h----------HHHHHhhccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 4 233333 6778888888899999999999999876344444
No 257
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.67 E-value=0.0017 Score=63.11 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=60.5
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc--ccCCHHHH-hhcCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEV-LREADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l-l~~aDiV~ 241 (342)
+.+|.|+|+|++|+.+|+.| +..|.+|+++|..++.. +... ..+....... ....|+++ +.++|+|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L-~~~g~~vvvId~d~~~v-~~~~--------~~g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLL-LSSGVKMVVLDHDPDHI-ETLR--------KFGMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEECCHHHH-HHHH--------HTTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HHHH--------hCCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 45799999999999999998 68899999999987642 2211 1122111111 11223444 67899999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
++++..+. .+.-....+.+.+...+|--++
T Consensus 74 v~~~~~~~--n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 74 NAIDDPQT--NLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp ECCSSHHH--HHHHHHHHHHHCTTCEEEEEES
T ss_pred ECCCChHH--HHHHHHHHHHhCCCCeEEEEEC
Confidence 99985333 3333445556666655544333
No 258
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.63 E-value=0.003 Score=59.98 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=64.2
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~aDiV~l 242 (342)
.|++|.|+|.|.||..+++.+ +.+|++|++.+++++.... ....+ +.... .......+.++....|+|+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~-~~~~l-------Ga~~v~~~~~~~~~~~~~~~~D~vid 257 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVISTSPSKKEE-ALKNF-------GADSFLVSRDQEQMQAAAGTLDGIID 257 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGHHH-HHHTS-------CCSEEEETTCHHHHHHTTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HHHhc-------CCceEEeccCHHHHHHhhCCCCEEEE
Confidence 588999999999999999984 8999999999987654311 11111 11110 00011123444456899999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
++.... .-...++.|+++..+|+++..
T Consensus 258 ~~g~~~-----~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 258 TVSAVH-----PLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp CCSSCC-----CSHHHHHHEEEEEEEEECCCC
T ss_pred CCCcHH-----HHHHHHHHHhcCCEEEEEccC
Confidence 987432 125677889999999998743
No 259
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.62 E-value=0.0045 Score=57.79 Aligned_cols=108 Identities=17% Similarity=0.258 Sum_probs=60.7
Q ss_pred CCeEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~-afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.++|+|||.|.||.++|..|+. ++.-+|..+|...+ +.+.......... .....+.... .+..+.+++||+|+++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~-~~~~~~~dl~~~~-~~~~~~~~i~--~~~~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANES-KAIGDAMDFNHGK-VFAPKPVDIW--HGDYDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH-HHHHHHHHHHHHT-TSSSSCCEEE--ECCGGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcc-hHHHHHhhHHHHh-hhcCCCeEEE--cCcHHHhCCCCEEEEc
Confidence 3589999999999999988743 23348999999865 3332111110000 0000011111 1234568999999999
Q ss_pred CCCCcccccc-----cC------H---HHHhcCCCCcEEEEcCCCcccCH
Q 019387 244 PVLDKTTYHL-----IN------K---ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 244 ~pl~~~t~~l-----i~------~---~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
.|... ..+. +. . +.+....|++.+++++- .+|.
T Consensus 82 ~~~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN--Pv~~ 128 (316)
T 1ldn_A 82 AGANQ-KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN--PVDI 128 (316)
T ss_dssp CSCCC-CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS--SHHH
T ss_pred CCCCC-CCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC--chHH
Confidence 87532 2221 10 1 22233357888999854 4444
No 260
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.62 E-value=0.0043 Score=55.85 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=53.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|+|+|+|+||+.+++.+. ..+-++.+ +|+.... ..++....++++++ ++|+++-+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~-~~~~eLva~~d~~~~~-------------------~~gv~v~~dl~~l~-~~DVvIDft 62 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAE-EKGHEIVGVIENTPKA-------------------TTPYQQYQHIADVK-GADVAIDFS 62 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCC---------------------CCSCBCSCTTTCT-TCSEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHH-hCCCEEEEEEecCccc-------------------cCCCceeCCHHHHh-CCCEEEEeC
Confidence 48999999999999999874 44337664 7876542 01223356788888 899988544
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
+- +.+. +.+. ++.|.-+|....|-
T Consensus 63 ~p-~a~~-----~~~~-l~~g~~vVigTTG~ 86 (243)
T 3qy9_A 63 NP-NLLF-----PLLD-EDFHLPLVVATTGE 86 (243)
T ss_dssp CH-HHHH-----HHHT-SCCCCCEEECCCSS
T ss_pred Ch-HHHH-----HHHH-HhcCCceEeCCCCC
Confidence 31 1222 2334 77787777666663
No 261
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.60 E-value=0.0029 Score=58.68 Aligned_cols=118 Identities=14% Similarity=0.163 Sum_probs=64.9
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
.+|+|||.|+||..+|..| . -|.+|.++++.... .+...+ .+......+... ......-++....+|+|+++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L-~-~g~~V~~~~r~~~~-~~~l~~-~G~~~~~~~~~~--~~~~~~~~~~~~~~D~vilavK 76 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYL-S-LYHDVTVVTRRQEQ-AAAIQS-EGIRLYKGGEEF--RADCSADTSINSDFDLLVVTVK 76 (307)
T ss_dssp CEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHH-HHHHHH-HCEEEEETTEEE--EECCEEESSCCSCCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHH-h-cCCceEEEECCHHH-HHHHHh-CCceEecCCCee--cccccccccccCCCCEEEEEeC
Confidence 5899999999999999998 4 68999999987642 222111 110011011000 0000000234578999999998
Q ss_pred CCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 019387 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 246 l~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~a 294 (342)
. .++...+ +.++.++++. +|.+.-|=- .++.|.+.+-..++.++
T Consensus 77 ~-~~~~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl~g 120 (307)
T 3ego_A 77 Q-HQLQSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIYVG 120 (307)
T ss_dssp G-GGHHHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEEEE
T ss_pred H-HHHHHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEEEE
Confidence 4 2334333 2334445666 888766632 22334443334444433
No 262
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.59 E-value=0.0038 Score=56.47 Aligned_cols=99 Identities=20% Similarity=0.239 Sum_probs=69.0
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
+..+|+++|+|+||+.+++. . ++++. +|+ ... ++. +.....++++++.++|+|+=
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~k~-----------------gel--gv~a~~d~d~lla~pD~VVe 66 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-RIS-----------------KDI--PGVVRLDEFQVPSDVSTVVE 66 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH---S-CCSEEEEEC-SSC-----------------CCC--SSSEECSSCCCCTTCCEEEE
T ss_pred ccceEEEECcCHHHHHHHhc---C-CcEEEEEEe-ccc-----------------ccc--CceeeCCHHHHhhCCCEEEE
Confidence 46799999999999999986 3 67654 566 111 111 22234678888889999998
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCCc
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNPM 291 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~---~aL~~aL~~g~i 291 (342)
|.+. .-+.+.....++.|.-+|-++-|.+.|. +.|.++-++|.-
T Consensus 67 ~A~~-----~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~ 113 (253)
T 1j5p_A 67 CASP-----EAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPA 113 (253)
T ss_dssp CSCH-----HHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSC
T ss_pred CCCH-----HHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCC
Confidence 8752 2334446677889999999999988887 445555555543
No 263
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.57 E-value=0.0042 Score=57.34 Aligned_cols=106 Identities=9% Similarity=0.056 Sum_probs=64.9
Q ss_pred CCeEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEE
Q 019387 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 165 gktvgIvG~-G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV 240 (342)
..+|+|+|+ |++|+..++.+ +..|.+++ .+||..... ...+...+.+++++.. ..|++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l-~~~g~~~V~~V~p~~~g~-----------------~~~G~~vy~sl~el~~~~~~D~v 68 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQA-IAYGTKMVGGVTPGKGGT-----------------THLGLPVFNTVREAVAATGATAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHHCCCEE
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCeEEEEeCCCcccc-----------------eeCCeeccCCHHHHhhcCCCCEE
Confidence 458999999 99999999987 55688854 566642100 0112334678999988 89999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCce
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMF 292 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~aL~~g~i~ 292 (342)
++++|. +...-+-.+.++. ... .+|..+-|-- -+.+.|.++.++..+.
T Consensus 69 iI~tP~--~~~~~~~~ea~~~-Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 69 VIYVPA--PFCKDSILEAIDA-GIK-LIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp EECCCG--GGHHHHHHHHHHT-TCS-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred EEecCH--HHHHHHHHHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 999994 3222222222332 222 3344554432 2344788888765554
No 264
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.57 E-value=0.056 Score=52.63 Aligned_cols=117 Identities=16% Similarity=0.255 Sum_probs=71.6
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC---------chhHHHHHHhhhhhhhhccCCCCccccccCCH
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
.++.|++|.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+....+..+.+ .+... . ...+.
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L-~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i---~~y~~--a-~~i~~ 303 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAF-HDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGV---RGYPK--A-EPLPA 303 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSS---TTCTT--S-EECCH
T ss_pred CCccCCEEEEeccCHHHHHHHHHH-HHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCc---ccCCC--c-eEcCc
Confidence 468899999999999999999997 67899998 44542 111222222211100 00000 1 11244
Q ss_pred HHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 231 DEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 231 ~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
++++ ..||+++-|.. .+.|+.+....++ -.+++-.+-+++- .++ .+.|.+..+.
T Consensus 304 ~ei~~~~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 304 ADFWGLPVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAA-DDILLEKGVL 358 (440)
T ss_dssp HHHTTCCCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHHTCE
T ss_pred hhhhcCCCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHH-HHHHHHCCCE
Confidence 5655 36999998865 3566666666664 5688888888864 443 3555554443
No 265
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.57 E-value=0.0018 Score=57.41 Aligned_cols=92 Identities=12% Similarity=0.163 Sum_probs=56.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc--ccCCHHHH-hhcCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEV-LREADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l-l~~aDiV~ 241 (342)
.+++.|+|+|.+|+.+|+.| ...|. |+++|+.++.. +... .+....... ....|+++ +.++|.|+
T Consensus 9 ~~~viI~G~G~~G~~la~~L-~~~g~-v~vid~~~~~~-~~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRK-KVLR---------SGANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHS-TTSEE-EEEESCGGGHH-HHHH---------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECCChHHHHHHHHH-HhCCe-EEEEECCHHHH-HHHh---------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 56899999999999999997 67888 99999887532 2111 111100000 11234444 67899999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEE
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVN 270 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lIN 270 (342)
+++|.. ..++.-....+.+.++..+|-
T Consensus 77 ~~~~~d--~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 77 VDLESD--SETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp ECCSCH--HHHHHHHHHHHHHCSSSEEEE
T ss_pred EcCCCc--HHHHHHHHHHHHHCCCCeEEE
Confidence 998853 334444455566677644443
No 266
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.54 E-value=0.0073 Score=56.41 Aligned_cols=69 Identities=13% Similarity=0.214 Sum_probs=48.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcC---CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGF---KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~af---g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDi 239 (342)
.++||||+|.||+..++.+ +.. ++++. ++|++++. .+.+.+.+ +.. ..+.++++++. +.|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l-~~~~~~~~~l~av~d~~~~~-a~~~a~~~-------~~~----~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVL-QTLPRSEHQVVAVAARDLSR-AKEFAQKH-------DIP----KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTSCTTTEEEEEEECSSHHH-HHHHHHHH-------TCS----CEESSHHHHHHCTTCCE
T ss_pred cEEEEECchHHHHHHHHHH-HhCCCCCeEEEEEEcCCHHH-HHHHHHHc-------CCC----cccCCHHHHhcCCCCCE
Confidence 3799999999999999987 444 35655 57887643 23332222 111 13579999997 6999
Q ss_pred EEEcCCCC
Q 019387 240 ISLHPVLD 247 (342)
Q Consensus 240 V~l~~pl~ 247 (342)
|++|+|..
T Consensus 70 V~i~tp~~ 77 (334)
T 3ohs_X 70 AYVGTQHP 77 (334)
T ss_dssp EEECCCGG
T ss_pred EEECCCcH
Confidence 99999853
No 267
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.53 E-value=0.0022 Score=56.74 Aligned_cols=68 Identities=15% Similarity=0.243 Sum_probs=43.5
Q ss_pred CeEEEEecCHHHHHHHHH-HHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARM-MVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~-l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+++|+|.|++|+.+++. .....|+++. ++|..+..... ......+...+++++++++.|+++++
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~-------------~i~gv~V~~~~dl~eli~~~D~ViIA 152 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT-------------EVGGVPVYNLDDLEQHVKDESVAILT 152 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTC-------------EETTEEEEEGGGHHHHCSSCCEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHh-------------HhcCCeeechhhHHHHHHhCCEEEEe
Confidence 479999999999999993 1235578776 57877653210 00112222356899999777999999
Q ss_pred CCC
Q 019387 244 PVL 246 (342)
Q Consensus 244 ~pl 246 (342)
+|.
T Consensus 153 vPs 155 (215)
T 2vt3_A 153 VPA 155 (215)
T ss_dssp SCH
T ss_pred cCc
Confidence 994
No 268
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.49 E-value=0.0054 Score=57.80 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.3
Q ss_pred CeEEEEecCHHHHHHHHHHHhc--CCcEEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~a--fg~~V~~~d~ 197 (342)
.+|||+|+|.||+.+.|.|... =+++|.+.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 3799999999999999987543 3588886544
No 269
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.42 E-value=0.0075 Score=56.87 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=25.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d 196 (342)
.+|||+|+|+||+.++|.|...-+++|.+..
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~ 34 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIN 34 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEec
Confidence 3899999999999999987544578887654
No 270
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.40 E-value=0.018 Score=53.25 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=59.4
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
..+|+|||.|.||..+|..|+ .-|. +|..+|+..+.......+..... .-.+ +.......+. +.+..||+|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~-~~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~~~~--~~~v~~~~~~-~~~~~aD~Vii 81 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAA-QRGIAREIVLEDIAKERVEAEVLDMQHGS-SFYP--TVSIDGSDDP-EICRDADMVVI 81 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHHHHHHHHHHHTG-GGST--TCEEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChhHHHHHHHHHHhhh-hhcC--CeEEEeCCCH-HHhCCCCEEEE
Confidence 468999999999999999875 5577 99999998643210001000000 0000 1111111233 45789999999
Q ss_pred cCCCCcccccc------------cC--HHHHhcCCCCcEEEEcCCCc
Q 019387 243 HPVLDKTTYHL------------IN--KERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 243 ~~pl~~~t~~l------------i~--~~~l~~mk~ga~lINvaRG~ 275 (342)
+++.. ...+. +. ...+....+++++|+++-|-
T Consensus 82 ~v~~~-~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 82 TAGPR-QKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 99632 22210 00 11222236788999987654
No 271
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.39 E-value=0.018 Score=53.26 Aligned_cols=124 Identities=16% Similarity=0.238 Sum_probs=71.7
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
+|+|+|.|.+|.++|..|+ .-|. +|..||+.++.......+. ........ .+.......+ .+.+++||+|+++.
T Consensus 2 kI~ViGaG~vG~~la~~l~-~~~~~~~v~L~D~~~~~~~g~~~dl-~~~~~~~~-~~~~i~~t~d-~~a~~~aDiVViaa 77 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCL-LNLDVDEIALVDIAEDLAVGEAMDL-AHAAAGID-KYPKIVGGAD-YSLLKGSEIIVVTA 77 (294)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHSCCSEEEEECSSHHHHHHHHHHH-HHHHHTTT-CCCEEEEESC-GGGGTTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECChHHHHHHHHHH-HhhhhhcC-CCCEEEEeCC-HHHhCCCCEEEECC
Confidence 7999999999999999875 3355 9999999875421111110 00000000 1222222335 77889999999997
Q ss_pred CCCcccccc-----c--CH-------HHHhcCCCCcEEEEcCCCcccCHHHHHHHHH----cCCceEEE--Ee
Q 019387 245 VLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSRGPVIDEVALVEHLK----QNPMFRVG--LD 297 (342)
Q Consensus 245 pl~~~t~~l-----i--~~-------~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~----~g~i~~aa--LD 297 (342)
+.. ...++ + |. +.+....|++++++++ +.+|.-..+-.-. ..++.|.+ ||
T Consensus 78 g~~-~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 78 GLA-RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCC-CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCC-CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 643 22222 1 11 2455567899999998 5566543322111 24566664 56
No 272
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.35 E-value=0.0081 Score=56.56 Aligned_cols=68 Identities=16% Similarity=0.197 Sum_probs=48.2
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEE
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV 240 (342)
.+|||||+|.||+. .++.+ +.. ++++. ++|+.++... +.+ .....+.++++++.. .|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~-~~~~~~~l~av~d~~~~~~~----~~~-----------~~~~~~~~~~~ll~~~~vD~V 71 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLI-MGTPGLELAGVSSSDASKVH----ADW-----------PAIPVVSDPQMLFNDPSIDLI 71 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTSTTEEEEEEECSCHHHHH----TTC-----------SSCCEESCHHHHHHCSSCCEE
T ss_pred ceEEEECCCHHHHHHHHHHH-hhCCCcEEEEEECCCHHHHH----hhC-----------CCCceECCHHHHhcCCCCCEE
Confidence 48999999999997 77776 444 78876 6788765321 000 122345799999976 8999
Q ss_pred EEcCCCCcc
Q 019387 241 SLHPVLDKT 249 (342)
Q Consensus 241 ~l~~pl~~~ 249 (342)
++|+|...+
T Consensus 72 ~i~tp~~~H 80 (352)
T 3kux_A 72 VIPTPNDTH 80 (352)
T ss_dssp EECSCTTTH
T ss_pred EEeCChHHH
Confidence 999996443
No 273
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.34 E-value=0.0098 Score=55.85 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=60.6
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
.+++|+|+|.|.||+.+|..|+ ..|. ++..+|...... +.......... ... .+... ..+..+.+++||+|+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~-~g~a~DL~~~~-~~~-~~~~i--~~~~~~a~~~aDiVv 81 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMV-LQGIAQEIGIVDIFKDKT-KGDAIDLEDAL-PFT-SPKKI--YSAEYSDAKDADLVV 81 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHHHTTG-GGS-CCCEE--EECCGGGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHhhHhhhh-hhc-CCcEE--EECcHHHhcCCCEEE
Confidence 4679999999999999998874 3344 899999976432 21111000000 000 01111 123346689999999
Q ss_pred EcCCCCc---ccc-cccC---------HHHHhcCCCCcEEEEcCCCcccCH
Q 019387 242 LHPVLDK---TTY-HLIN---------KERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 242 l~~pl~~---~t~-~li~---------~~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
++..... +|+ .++. .+.+....|++++++++ +.+|.
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi 130 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDI 130 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHTTTCCSEEEECS--SSHHH
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHH
Confidence 9865321 122 2221 13445556789999996 45543
No 274
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.34 E-value=0.007 Score=56.93 Aligned_cols=109 Identities=6% Similarity=0.067 Sum_probs=63.3
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
..++|+|+|.|.||..+|..++ ..|. +|..+|...+.......+-... .... .........+.++ +++||+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la-~~g~~~ev~L~Di~~~~~~g~a~DL~~~--~~~~-~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL-MKDLADEVALVDVMEDKLKGEMMDLEHG--SLFL-HTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH-HHCCCSEEEEECSCHHHHHHHHHHHHHH--GGGS-CCSEEEEESSSCS-CSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHHhhhh--hhcc-cCCeEEEcCCHHH-hCCCCEEE
Confidence 5689999999999999998874 4455 8999999764321111110000 0000 0111222345665 89999999
Q ss_pred EcCCCCc---ccc-cccCH---------HHHhcCCCCcEEEEcCCCcccCH
Q 019387 242 LHPVLDK---TTY-HLINK---------ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 242 l~~pl~~---~t~-~li~~---------~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
++..... +|| .++.. +.+....|++++++++- .+|.
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN--Pvdi 143 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE--LGTD 143 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS--SHHH
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC--ccHH
Confidence 9865321 122 12211 23445578999999984 4443
No 275
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.32 E-value=0.0081 Score=56.81 Aligned_cols=67 Identities=10% Similarity=0.211 Sum_probs=47.5
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEE
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV 240 (342)
.+|||||+|.||+. .++.+ +.. ++++. ++|+.++.. . +.+ + ....+.++++++. +.|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~-~---~~~-------~----~~~~~~~~~~ll~~~~vD~V 69 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLL-DVLDEYQISKIMTSRTEEV-K---RDF-------P----DAEVVHELEEITNDPAIELV 69 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECSCHHHH-H---HHC-------T----TSEEESSTHHHHTCTTCCEE
T ss_pred ceEEEEccCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHH-H---hhC-------C----CCceECCHHHHhcCCCCCEE
Confidence 48999999999997 67776 454 78876 578876431 1 111 0 1224579999998 78999
Q ss_pred EEcCCCCc
Q 019387 241 SLHPVLDK 248 (342)
Q Consensus 241 ~l~~pl~~ 248 (342)
++|+|...
T Consensus 70 ~i~tp~~~ 77 (358)
T 3gdo_A 70 IVTTPSGL 77 (358)
T ss_dssp EECSCTTT
T ss_pred EEcCCcHH
Confidence 99999643
No 276
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=96.31 E-value=0.0051 Score=58.53 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=65.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
-++-|+|-|.+|+++|+.+ +.+|++|+++|++++.. + .+-++.+|-++...|
T Consensus 200 ~~L~I~GaGhva~aLa~la-~~lgf~V~v~D~R~~~~--------------------------~-~~~fp~a~~v~~~~p 251 (362)
T 3on5_A 200 ERLIIFGAGPDVPPLVTFA-SNVGFYTVVTDWRPNQC--------------------------E-KHFFPDADEIIVDFP 251 (362)
T ss_dssp EEEEEECCSTTHHHHHHHH-HHHTEEEEEEESCGGGG--------------------------C-GGGCTTCSEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHH-HHCCCeEEEECCCcccc--------------------------c-cccCCCceEEecCCH
Confidence 4799999999999999985 79999999999987531 0 111345665554444
Q ss_pred CCcccccccCHHHHhc--CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEE
Q 019387 246 LDKTTYHLINKERLAT--MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGL 296 (342)
Q Consensus 246 l~~~t~~li~~~~l~~--mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaL 296 (342)
.+.+.. +.+++++|=..++.-.|...|.++|+. .....++
T Consensus 252 ----------~~~~~~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~ 293 (362)
T 3on5_A 252 ----------ADFLRKFLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGI 293 (362)
T ss_dssp ----------HHHHHHSCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEE
T ss_pred ----------HHHHhhcCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEE
Confidence 334444 567788888888888888888888876 3444443
No 277
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=96.30 E-value=0.075 Score=49.33 Aligned_cols=104 Identities=16% Similarity=0.286 Sum_probs=64.9
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcC
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 237 (342)
.+.|.+|++||= |++.++.+..+ ..| |++|.+..|..-...+...+. ....+ ..+....++++.++++
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~~G~~v~~~~P~~~~~~~~~~~~----~~~~g---~~~~~~~d~~eav~~a 219 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYAL-SLFENVEMYFVSPKELRLPKDIIED----LKAKN---IKFYEKESLDDLDDDI 219 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHHH----HHHTT---CCEEEESCGGGCCTTC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHH-HhcCCCEEEEECCcccccCHHHHHH----HHHcC---CEEEEEcCHHHHhcCC
Confidence 378999999997 58999999986 689 999999887532111111111 11111 1223357899999999
Q ss_pred CEEEEcCCCCc-----cc------ccccCHHHHhcCCCCcEEEEcC-CCc
Q 019387 238 DVISLHPVLDK-----TT------YHLINKERLATMKKEAILVNCS-RGP 275 (342)
Q Consensus 238 DiV~l~~pl~~-----~t------~~li~~~~l~~mk~ga~lINva-RG~ 275 (342)
|+|....-..+ +. ..-++.+.++. ++++|.-+. ||.
T Consensus 220 Dvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lPRg~ 267 (306)
T 4ekn_B 220 DVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLPRVD 267 (306)
T ss_dssp SEEEECCCCGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSCCSS
T ss_pred CEEEeCCcccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCCCCC
Confidence 99986532111 11 13457777766 666666554 553
No 278
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.30 E-value=0.012 Score=55.14 Aligned_cols=69 Identities=12% Similarity=0.168 Sum_probs=47.1
Q ss_pred eEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEEEE
Q 019387 167 TVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (342)
Q Consensus 167 tvgIvG~G~IG~~-vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV~l 242 (342)
++||||+|.||+. .+..+.+.=+++|. ++|++++. .+++-+.| +.. ..+.+++++++. -|+|++
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~-------g~~----~~y~d~~ell~~~~iDaV~I 92 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTR-AREMADRF-------SVP----HAFGSYEEMLASDVIDAVYI 92 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHH-HHHHHHHH-------TCS----EEESSHHHHHHCSSCSEEEE
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHc-------CCC----eeeCCHHHHhcCCCCCEEEE
Confidence 7999999999986 46665333478887 57887653 33333333 111 135799999964 799999
Q ss_pred cCCCC
Q 019387 243 HPVLD 247 (342)
Q Consensus 243 ~~pl~ 247 (342)
|+|..
T Consensus 93 ~tP~~ 97 (350)
T 4had_A 93 PLPTS 97 (350)
T ss_dssp CSCGG
T ss_pred eCCCc
Confidence 99953
No 279
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.30 E-value=0.004 Score=59.44 Aligned_cols=71 Identities=18% Similarity=0.333 Sum_probs=47.6
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
.+.|++|||+|.|.+|+.+++.+ +.+|++|+++|+++....... . . ......+.....+.++++++|+|+
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa-~~lG~~viv~d~~~~~p~~~~-------a-d-~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSA-QKMGYKVVVLDPSEDCPCRYV-------A-H-EFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCTTCTTGGG-------S-S-EEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCChhhhh-------C-C-EEEECCCCCHHHHHHHHHhCCcce
Confidence 46799999999999999999995 899999999998764321110 0 0 000001111234667788899886
Q ss_pred E
Q 019387 242 L 242 (342)
Q Consensus 242 l 242 (342)
.
T Consensus 79 ~ 79 (377)
T 3orq_A 79 Y 79 (377)
T ss_dssp E
T ss_pred e
Confidence 5
No 280
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=96.29 E-value=0.24 Score=46.87 Aligned_cols=113 Identities=12% Similarity=0.162 Sum_probs=72.6
Q ss_pred cCCCe--EEEEec---C--HHHHHHHHHHHhcCCcEEEEEcCC-chhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh
Q 019387 163 LKGQT--VGVIGA---G--RIGSAYARMMVEGFKMNLIYYDLY-QATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 163 L~gkt--vgIvG~---G--~IG~~vA~~l~~afg~~V~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll 234 (342)
+.|++ |+++|= | ++.++.+..+ ..||++|.+..|. .-...+.+.+.........+ ..+....++++++
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav 263 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG---GSLQVSHDIDSAY 263 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS---CEEEEECCHHHHH
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHH-HHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcC---CeEEEECCHHHHh
Confidence 78999 999996 3 8999999986 5799999999886 21111111110000001111 1233457899999
Q ss_pred hcCCEEEEcCCCC-----cc----------cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 235 READVISLHPVLD-----KT----------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 235 ~~aDiV~l~~pl~-----~~----------t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
+++|+|..-.-.. .+ ...-++.+.++.+| +++|.=+. ||.=|+.+
T Consensus 264 ~~aDvVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~e 326 (359)
T 1zq6_A 264 AGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCLPLRRNVKATDA 326 (359)
T ss_dssp TTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCSCCCBTTTBCHH
T ss_pred cCCCEEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCCCCCCCceeCHH
Confidence 9999996654322 11 12457889999999 88888764 67666654
No 281
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=96.28 E-value=0.43 Score=45.08 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=67.5
Q ss_pred cccCCCeEEEEecC-HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 161 NLLKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~L~gktvgIvG~G-~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
..|.|++|++||=+ ++.++.+..+ ..||++|.+..|..-...+...+....... .......+....+++++++++|+
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l-~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~-~~~~g~~~~~~~d~~eav~~aDV 261 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAA-TKMGVNVAVATPRGYEIPSHIVELIQKARE-GVQSPGNLTQTTVPEVAVKDADV 261 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHHHT-TCSSCCCEEEESCHHHHTTTCSE
T ss_pred cccCCCEEEEECCCchHHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHhhh-hccCCCeEEEECCHHHHhcCCCE
Confidence 45899999999975 5777777775 579999999887532111111110000000 00111233345799999999999
Q ss_pred EEEcC--CCCcc----------cccccCHHHHhc--CCCCcEEEEcC
Q 019387 240 ISLHP--VLDKT----------TYHLINKERLAT--MKKEAILVNCS 272 (342)
Q Consensus 240 V~l~~--pl~~~----------t~~li~~~~l~~--mk~ga~lINva 272 (342)
|..-. +...+ ...-++.+.++. +|++++|.-+.
T Consensus 262 vytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 262 IVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp EEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred EEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 97643 22221 124578899988 89999988775
No 282
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.27 E-value=0.0066 Score=57.35 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=60.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHHH-HhhcCCEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDE-VLREADVIS 241 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~-ll~~aDiV~ 241 (342)
.|++|.|+|.|.||..+++. ++.+|++|++.+++++..... ..+ +.... ......++.+ +....|+|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~ql-ak~~Ga~Vi~~~~~~~~~~~~--~~l-------Ga~~v~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLI-SKAMGAETYVISRSSRKREDA--MKM-------GADHYIATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHTCEEEEEESSSTTHHHH--HHH-------TCSEEEEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHCCCEEEEEcCCHHHHHHH--HHc-------CCCEEEcCcCchHHHHHhhcCCCEEE
Confidence 48899999999999999998 489999999999876543111 111 11111 0111103322 224689999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.+.+.++ ... -...++.+++|..++.++.
T Consensus 249 d~~g~~~--~~~-~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 249 VCASSLT--DID-FNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ECCSCST--TCC-TTTGGGGEEEEEEEEECCC
T ss_pred ECCCCCc--HHH-HHHHHHHhcCCCEEEEecC
Confidence 9987421 011 2345677888888888764
No 283
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.26 E-value=0.0043 Score=56.00 Aligned_cols=96 Identities=21% Similarity=0.226 Sum_probs=60.8
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhccCCCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|+|.|.+|..+|+.|+ ..|. ++..+|...- .+.+...+..... .....
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La-~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---np~~~ 99 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLA-GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQL---NPDIQ 99 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHH-HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH---CTTSE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHH-HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHH---CCCCE
Confidence 4688999999999999999999985 6777 7778876431 1111111111000 00000
Q ss_pred ccc-c---ccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 222 VTW-K---RASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 222 ~~~-~---~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
... . ...+++++++++|+|+.|.+ +.+++.++++...+.
T Consensus 100 v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~ 142 (251)
T 1zud_1 100 LTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL 142 (251)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT
T ss_pred EEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh
Confidence 000 0 11246778899999999987 678888888876653
No 284
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.25 E-value=0.16 Score=49.01 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=72.9
Q ss_pred ccccCCCeEEEEecCHHHHHHHHHHHhc-CCcEEE-EEcCC---------chhHHHHHHhhhhhhhhccCCCCccccccC
Q 019387 160 GNLLKGQTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRAS 228 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~IG~~vA~~l~~a-fg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (342)
|.++.|++|.|.|+|++|+.+|+.| .. .|++|+ +.|.+ ....+..+.+..+.+ .+... . ...
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L-~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l---~~y~~--a-~~~ 276 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLI-SQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTV---VTYPK--G-ERI 276 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCS---TTCSS--S-EEE
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHH-HHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCc---ccCCC--c-eEc
Confidence 3478999999999999999999987 56 899998 34542 111222222111100 00000 0 112
Q ss_pred CHHHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 229 SMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 229 ~l~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+.++++ ..||+++-|.. .+.|+.+....++ ..+++--+-+++- .++ .+.|.+..+.
T Consensus 277 ~~~eil~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 333 (415)
T 2tmg_A 277 TNEELLELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEA-DEILSRRGIL 333 (415)
T ss_dssp CHHHHTTCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CchhhhcCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHH-HHHHHHCCCE
Confidence 345555 47999998875 3567888888885 5588888888864 443 3456555543
No 285
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.25 E-value=0.018 Score=53.80 Aligned_cols=112 Identities=20% Similarity=0.230 Sum_probs=63.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc-hhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
..++|+|+|.|.||..+|..++ ..|. +|..+|+.+ +...+........-..... .........+ .+.+++||+|+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~-~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~-~~~~i~~t~d-~~a~~~aDvVI 83 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLA-QKELADVVLVDIPQLENPTKGKALDMLEASPVQG-FDANIIGTSD-YADTADSDVVV 83 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT-CCCCEEEESC-GGGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc-CCCEEEEcCC-HHHhCCCCEEE
Confidence 4579999999999999999874 5677 999999984 3222221111000000000 0111111223 35679999999
Q ss_pred EcCCCCccccc-----ccC------H---HHHhcCCCCcEEEEcCCCcccCHHH
Q 019387 242 LHPVLDKTTYH-----LIN------K---ERLATMKKEAILVNCSRGPVIDEVA 281 (342)
Q Consensus 242 l~~pl~~~t~~-----li~------~---~~l~~mk~ga~lINvaRG~~vd~~a 281 (342)
++... +...+ ++. + +.+....|++++++++- .+|.-.
T Consensus 84 iaag~-p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN--Pvd~~t 134 (315)
T 3tl2_A 84 ITAGI-ARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN--PVDAMT 134 (315)
T ss_dssp ECCSC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHHHH
T ss_pred EeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC--hHHHHH
Confidence 99743 22222 221 1 23334467899999983 444433
No 286
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.23 E-value=0.01 Score=55.75 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=46.3
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhccCCCCc--------cccccCCHHHHhhcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPV--------TWKRASSMDEVLREA 237 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~ll~~a 237 (342)
+|||+|+|.||+.+++.|...-++++.+ .|+.++. ...+...++ + ...+..+. ......+.++++.+.
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~-~~~~~~~~g-~-~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDF-EAYRAKELG-I-PVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSH-HHHHHHHTT-C-CEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHH-HHHHHHhcC-c-cccccccccceeccCCceEEcCcHHHhccCC
Confidence 7999999999999999874323678765 5665332 222111110 0 00000000 011235788998899
Q ss_pred CEEEEcCCCC
Q 019387 238 DVISLHPVLD 247 (342)
Q Consensus 238 DiV~l~~pl~ 247 (342)
|+|+.|+|..
T Consensus 81 DvV~~aTp~~ 90 (334)
T 2czc_A 81 DIIVDATPGG 90 (334)
T ss_dssp SEEEECCSTT
T ss_pred CEEEECCCcc
Confidence 9999999854
No 287
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.23 E-value=0.018 Score=56.40 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=70.8
Q ss_pred ccccCCCeEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCC
Q 019387 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 160 ~~~L~gktvgIvG~G----------~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
+..+.|++|+|+|+. .-...+++.| ...|++|.+|||....... ..| . ......+
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L-~~~g~~v~~~DP~~~~~~~---~~~---------~--~~~~~~~ 381 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAAL-QDAGATVKAYDPEGVEQAS---KML---------T--DVEFVEN 381 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHH-HHTSCEEEEECSSCHHHHG---GGC---------S--SCCBCSC
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCCHhHH---Hhc---------C--CceEecC
Confidence 346899999999997 6678999997 6899999999998743211 111 0 1223468
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHHHH-hcCCCCcEEEEcCCCcccCHHHHH
Q 019387 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVALV 283 (342)
Q Consensus 230 l~~ll~~aDiV~l~~pl~~~t~~li~~~~l-~~mk~ga~lINvaRG~~vd~~aL~ 283 (342)
+++.++++|.|+++++= ++-+. ++-+.+ +.|+ +.+++|+ |+ +.|.+.+.
T Consensus 382 ~~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~~ 431 (446)
T 4a7p_A 382 PYAAADGADALVIVTEW-DAFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAELE 431 (446)
T ss_dssp HHHHHTTBSEEEECSCC-TTTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHHH
T ss_pred hhHHhcCCCEEEEeeCC-HHhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHHH
Confidence 89999999999999863 22222 454444 4566 4678885 64 46666543
No 288
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.22 E-value=0.0069 Score=56.88 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=61.7
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.|++|.|+|.|.||...++. ++.+|++|++.++++++.... ..+ +.... + .+.+++.+..|+|+-+
T Consensus 176 ~g~~VlV~GaG~vG~~a~ql-a~~~Ga~Vi~~~~~~~~~~~~--~~l-------Ga~~v-~---~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKY-AVAMGAEVSVFARNEHKKQDA--LSM-------GVKHF-Y---TDPKQCKEELDFIIST 241 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHH-HHHTTCEEEEECSSSTTHHHH--HHT-------TCSEE-E---SSGGGCCSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHH-HHHCCCeEEEEeCCHHHHHHH--Hhc-------CCCee-c---CCHHHHhcCCCEEEEC
Confidence 48899999999999999998 589999999999877543211 111 11111 1 1222222378999988
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
..... .-...++.++++..++.++-..
T Consensus 242 ~g~~~-----~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 242 IPTHY-----DLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp CCSCC-----CHHHHHTTEEEEEEEEECCCCC
T ss_pred CCcHH-----HHHHHHHHHhcCCEEEEECCCC
Confidence 76431 2345677888888888886433
No 289
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.21 E-value=0.004 Score=58.99 Aligned_cols=99 Identities=12% Similarity=0.169 Sum_probs=62.7
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCc---hhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.+.|++|.|+|.|.||..+++.+ +.+|++|++.+++. +.. + +...++..... .. . ....+.+.-...|
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~-~-~~~~~ga~~v~-~~-~----~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQ-T-VIEETKTNYYN-SS-N----GYDKLKDSVGKFD 248 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHH-HHHTCEEEEEESSCCCHHHH-H-HHHHHTCEEEE-CT-T----CSHHHHHHHCCEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCccchHHH-H-HHHHhCCceec-hH-H----HHHHHHHhCCCCC
Confidence 46799999999999999999985 88999999999876 432 1 11112110000 00 0 0011111113589
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
+|+.+....+.. + ...+..|+++..+|+++-
T Consensus 249 ~vid~~g~~~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 249 VIIDATGADVNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEECCCCCTHH---H-HHHGGGEEEEEEEEECSC
T ss_pred EEEECCCChHHH---H-HHHHHHHhcCCEEEEEec
Confidence 999998742211 1 556788899999999874
No 290
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.20 E-value=0.018 Score=53.83 Aligned_cols=108 Identities=15% Similarity=0.210 Sum_probs=60.2
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
+|+|+|.|.||+.+|..|+ ..|. +|..+|..+... +.............. ....... .+..+.+++||+|+++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~-~g~a~DL~~~~~~~~-~~~~v~~-~~~~~a~~~aDvVii~a 77 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVA-RQDVAKEVVMVDIKDGMP-QGKALDMRESSPIHG-FDTRVTG-TNDYGPTEDSDVCIITA 77 (314)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHTCSSEEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCEEEE-ESSSGGGTTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCchHHH-HHHHHHHhccccccC-CCcEEEE-CCCHHHhCCCCEEEECC
Confidence 7999999999999998874 3344 999999987532 211000000000000 0011111 13456789999999997
Q ss_pred CCCcccccc-----c--C-------HHHHhcCCCCcEEEEcCCCcccCHHH
Q 019387 245 VLDKTTYHL-----I--N-------KERLATMKKEAILVNCSRGPVIDEVA 281 (342)
Q Consensus 245 pl~~~t~~l-----i--~-------~~~l~~mk~ga~lINvaRG~~vd~~a 281 (342)
+.. ...++ + | .+.+....|++++++++- .+|.-.
T Consensus 78 g~~-~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN--Pvd~~t 125 (314)
T 3nep_X 78 GLP-RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN--PLDVMT 125 (314)
T ss_dssp CC--------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS--SHHHHH
T ss_pred CCC-CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC--chhHHH
Confidence 643 22221 1 1 124455568899999984 444433
No 291
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.19 E-value=0.037 Score=50.47 Aligned_cols=118 Identities=18% Similarity=0.153 Sum_probs=76.4
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
.++.|+++.|+|.|..+++++-.| ...|+ +|.+++|..++. +...+.+.... . .... ....+.++++|+
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL-~~~g~~~i~i~nRt~~ra-~~la~~~~~~~---~--~~~~---~~~~~~~~~~dl 190 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYAL-AEAGIASITLCDPSTARM-GAVCELLGNGF---P--GLTV---STQFSGLEDFDL 190 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHH-HHHHHHHHHHC---T--TCEE---ESCCSCSTTCSE
T ss_pred CCcccCeEEEEecHHHHHHHHHHH-HHhCCCeEEEeCCCHHHH-HHHHHHHhccC---C--ccee---hhhhhhhhcccc
Confidence 457799999999999999999987 46775 899999987542 22222211100 0 0000 111223567999
Q ss_pred EEEcCCCCcc--cccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 240 ISLHPVLDKT--TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 240 V~l~~pl~~~--t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
|+.+.|..-. ..--++...++.++++.++.++.-.+. .+.=|.+|-+.|
T Consensus 191 iiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~-~T~ll~~A~~~G 241 (269)
T 3tum_A 191 VANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPE-ITPLLNRARQVG 241 (269)
T ss_dssp EEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSSS-SCHHHHHHHHHT
T ss_pred cccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCCC-CCHHHHHHHHCc
Confidence 9999997532 223467788899999999999877664 344455554545
No 292
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.19 E-value=0.013 Score=56.16 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=60.0
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh----h--c
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--E 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll----~--~ 236 (342)
.|++|.|+|.|.+|...++. ++.+|+ +|++.+.+++... +...+ +....-.....++.+.+ . .
T Consensus 213 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~~--~~~~l-------Ga~~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAI-LKHAGASKVILSEPSEVRRN--LAKEL-------GADHVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEECSCHHHHH--HHHHH-------TCSEEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEECCCHHHHH--HHHHc-------CCCEEEcCCCCCHHHHHHHHhCCCC
Confidence 58899999999999999998 589999 9999998765431 11112 11111000112333322 1 4
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcC----CCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATM----KKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~m----k~ga~lINvaR 273 (342)
.|+|+-|+.....+. ...++.+ ++|..++.++-
T Consensus 283 ~D~vid~~g~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 283 AKLFLEATGVPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CSEEEECSSCHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CCEEEECCCCcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 999999987421121 2233444 99999999874
No 293
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.18 E-value=0.031 Score=54.50 Aligned_cols=119 Identities=14% Similarity=0.143 Sum_probs=70.7
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEc--------CCch--hHHHHHHhhh-------hhhhhccCCCCcc
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYD--------LYQA--TRLEKFVTAY-------GQFLKANGEQPVT 223 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d--------~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~ 223 (342)
.++.|+||.|=|+|++|+.+|+.| ...|++|++.+ +..- ..+....+.- ..+....+..
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~--- 306 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKA-MEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLV--- 306 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCE---
T ss_pred CCcCCCEEEEeCCChHHHHHHHHH-HhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcE---
Confidence 468999999999999999999997 68999998654 2211 0111111000 0000000000
Q ss_pred ccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 224 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKE--AILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 224 ~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~g--a~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+....++ +-..||+++=|. +.+.|+.+....++.+ .++++-+-+.+-.+ + .+.|.+..|.
T Consensus 307 ~~~~~~i--~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl 368 (450)
T 4fcc_A 307 YLEGQQP--WSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL 368 (450)
T ss_dssp EEETCCG--GGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE
T ss_pred EecCccc--ccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE
Confidence 0001111 123699998775 4578999888888754 58888888886443 3 3566665554
No 294
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.17 E-value=0.0057 Score=57.44 Aligned_cols=95 Identities=15% Similarity=0.084 Sum_probs=61.5
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh------c
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~------~ 236 (342)
.|++|.|+|.|.||+.+++.+ +.+|+ +|++.+++++.. +. ...+ +....-.....++.+.+. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~-~~-~~~~-------Ga~~~~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVA-KASGAYPVIVSEPSDFRR-EL-AKKV-------GADYVINPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHH-HH-HHHH-------TCSEEECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH-HH-HHHh-------CCCEEECCCCcCHHHHHHHHcCCCC
Confidence 689999999999999999984 89999 999999876542 11 1111 111000001123333322 5
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.+.... ++ -...++.++++..+|.++-
T Consensus 237 ~D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 237 VDVFLEFSGAP-KA----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEEECSCCH-HH----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCCH-HH----HHHHHHHHhcCCEEEEEcc
Confidence 89999988631 11 2456778888889998874
No 295
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.17 E-value=0.01 Score=60.08 Aligned_cols=139 Identities=15% Similarity=0.206 Sum_probs=81.4
Q ss_pred eEecCCCC-CchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhcCC
Q 019387 111 AVGNTPGV-LTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFK 189 (342)
Q Consensus 111 ~V~n~~~~-~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~afg 189 (342)
+.++-... .....||.+.-+-|.+.|- ..|..+ ....|.+++|.|||.|.+|..+|+.|+ ..|
T Consensus 286 ~~~~l~~~~dp~~la~~~~~Lnlklm~w----------Rllp~~-----g~ekL~~arVLIVGaGGLGs~vA~~La-~aG 349 (615)
T 4gsl_A 286 RVVDLSSLLDPLKIADQSVDLNLKLMKW----------RILPDL-----NLDIIKNTKVLLLGAGTLGCYVSRALI-AWG 349 (615)
T ss_dssp EEEECHHHHCHHHHHHHHHHHHHHHHHH----------HTCTTC-----CHHHHHTCEEEEECCSHHHHHHHHHHH-HTT
T ss_pred eEEeccccCCHHHHHhhhhhhhhHHHHH----------hhcchh-----hHHHHhCCeEEEECCCHHHHHHHHHHH-HcC
Confidence 44444333 4556777777666655531 122211 113689999999999999999999985 667
Q ss_pred c-EEEEEcCCch------------------hHHHHHHhhhhhhhhccCCCCcc-cc------------------ccCCHH
Q 019387 190 M-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQPVT-WK------------------RASSMD 231 (342)
Q Consensus 190 ~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~~l~ 231 (342)
+ ++..+|...- .+.+...+...... ...... +. ....++
T Consensus 350 VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN---P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~ 426 (615)
T 4gsl_A 350 VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF---PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLR 426 (615)
T ss_dssp CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC---TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC---CCcEEEEeeccccccCccccchhhhcCCHHHHH
Confidence 7 7888887431 11111111111100 000000 00 012456
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 232 ~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
++++++|+|+.|+. +.+++.+++...... |.-+|+.+
T Consensus 427 ~ll~~~DlVvd~tD-n~~tR~~ln~~c~~~---~~PlI~aa 463 (615)
T 4gsl_A 427 ALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 463 (615)
T ss_dssp HHHHHCSEEEECCS-SGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred HHhhcCCEEEecCC-CHHHHHHHHHHHHHc---CCeEEEEE
Confidence 78999999999985 678899988866553 44566654
No 296
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.17 E-value=0.014 Score=54.15 Aligned_cols=107 Identities=16% Similarity=0.262 Sum_probs=59.6
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
++|+|+|.|.+|..+|..|+ ..|. +|..+|...+. .+.............. .........+. +.+++||+|+++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la-~~g~~~v~L~Di~~~~-~~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA-AKELGDIVLLDIVEGV-PQGKALDLYEASPIEG-FDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSSSSH-HHHHHHHHHTTHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCCccH-HHHHHHhHHHhHhhcC-CCeEEEECCCH-HHHCCCCEEEEcC
Confidence 58999999999999999874 5564 89999987643 2221111110000000 11112222456 5689999999998
Q ss_pred CCCcccccc-------cC----H---HHHhcCCCCcEEEEcCCCcccCH
Q 019387 245 VLDKTTYHL-------IN----K---ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 245 pl~~~t~~l-------i~----~---~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
+. +...+. .| + +.+....|++++++++ ..+|.
T Consensus 79 g~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t--NPv~~ 124 (309)
T 1ur5_A 79 GA-PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN--NPLDA 124 (309)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC--SSHHH
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC--CchHH
Confidence 54 332221 01 1 2233335788999974 34444
No 297
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.15 E-value=0.0082 Score=56.56 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=24.8
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 197 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~ 197 (342)
+|||+|+|.||+.+.|.|...-.++|.+.+.
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~ 33 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND 33 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeC
Confidence 7999999999999999874333678876544
No 298
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.15 E-value=0.024 Score=53.70 Aligned_cols=95 Identities=18% Similarity=0.147 Sum_probs=62.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh-----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~----- 235 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.+++++..... ..+ +.... .... ..++.+.+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~ql-a~~~Ga~~Vi~~~~~~~~~~~~--~~l-------Ga~~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMG-CHSAGAKRIIAVDLNPDKFEKA--KVF-------GATDFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEECSCGGGHHHH--HHT-------TCCEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEEcCCHHHHHHH--HHh-------CCceEEeccccchhHHHHHHHHhCC
Confidence 48899999999999999998 589999 899999876543111 111 11111 1111 123444433
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaR 273 (342)
..|+|+.++... ++ -...++.++++ ..+|.++-
T Consensus 262 g~D~vid~~g~~-~~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 262 GVDFSLECVGNV-GV----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CBSEEEECSCCH-HH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCCH-HH----HHHHHHHhhcCCcEEEEEcC
Confidence 489999988631 21 24668889999 89998874
No 299
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.15 E-value=0.0095 Score=57.98 Aligned_cols=72 Identities=13% Similarity=0.163 Sum_probs=47.9
Q ss_pred CeEEEEecCHHHH-HHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEE
Q 019387 166 QTVGVIGAGRIGS-AYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~-~vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV 240 (342)
.+|||||+|.||+ ..++.+ ... ++++. ++|+.++. .+.+.+.+ +........+.++++++. +.|+|
T Consensus 84 irigiIG~G~~g~~~~~~~l-~~~~~~~lvav~d~~~~~-~~~~a~~~-------g~~~~~~~~~~~~~~ll~~~~vD~V 154 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGF-AGCQHSRIEALVSGNAEK-AKIVAAEY-------GVDPRKIYDYSNFDKIAKDPKIDAV 154 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHT-TTCSSEEEEEEECSCHHH-HHHHHHHT-------TCCGGGEECSSSGGGGGGCTTCCEE
T ss_pred eEEEEECCcHHHHHHHHHHH-hhCCCcEEEEEEcCCHHH-HHHHHHHh-------CCCcccccccCCHHHHhcCCCCCEE
Confidence 4799999999997 888886 444 67765 68887653 22222222 111101123568899987 79999
Q ss_pred EEcCCC
Q 019387 241 SLHPVL 246 (342)
Q Consensus 241 ~l~~pl 246 (342)
++|+|.
T Consensus 155 ~iatp~ 160 (433)
T 1h6d_A 155 YIILPN 160 (433)
T ss_dssp EECSCG
T ss_pred EEcCCc
Confidence 999984
No 300
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.15 E-value=0.0048 Score=57.99 Aligned_cols=70 Identities=16% Similarity=0.223 Sum_probs=46.8
Q ss_pred CeEEEEecCHHHHH-HHH-HHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEE
Q 019387 166 QTVGVIGAGRIGSA-YAR-MMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~-~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV 240 (342)
.+|||||+|.||+. .++ .+.+.-++++. ++|+.++.. +. ...+ .+...+.++++++.. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~~-~~~~-----------~~~~~~~~~~~ll~~~~~D~V 69 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQ-APIY-----------SHIHFTSDLDEVLNDPDVKLV 69 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGG-GG-SGGG-----------TTCEEESCTHHHHTCTTEEEE
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-HH-HHhc-----------CCCceECCHHHHhcCCCCCEE
Confidence 37999999999996 455 43233478887 688876532 11 1110 122345799999986 8999
Q ss_pred EEcCCCCc
Q 019387 241 SLHPVLDK 248 (342)
Q Consensus 241 ~l~~pl~~ 248 (342)
++|+|...
T Consensus 70 ~i~tp~~~ 77 (345)
T 3f4l_A 70 VVCTHADS 77 (345)
T ss_dssp EECSCGGG
T ss_pred EEcCChHH
Confidence 99998543
No 301
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.14 E-value=0.0092 Score=60.28 Aligned_cols=104 Identities=16% Similarity=0.243 Sum_probs=64.8
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc------------------hhHHHHHHhhhhhhhhccCCCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ------------------ATRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|... ..+.+...+..... .....
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~i---NP~v~ 398 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI---FPLMD 398 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-TTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHH---CTTCE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhH---CCCcE
Confidence 5688999999999999999999985 6787 788887541 01111111111110 00000
Q ss_pred ccc-c------------------ccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 222 VTW-K------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 222 ~~~-~------------------~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
... . ....++++++++|+|+.|+. +.+++.+++...... +..+|+.+
T Consensus 399 v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 399 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp EEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 000 0 11245678999999999986 678888888766553 34566643
No 302
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.11 E-value=0.034 Score=50.79 Aligned_cols=80 Identities=13% Similarity=0.139 Sum_probs=50.3
Q ss_pred ccCCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCC
Q 019387 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~L~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aD 238 (342)
.+.||++.|+| .|.||+.+++.| ...|++|++++++.+. .+...+.+.. ..+.... .+....+++++++++|
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L-~~~G~~V~i~~R~~~~-~~~l~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~D 190 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALL-AGEGAEVVLCGRKLDK-AQAAADSVNK---RFKVNVTAAETADDASRAEAVKGAH 190 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHH-HHHHHHHHHH---HHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHH-HHCcCEEEEEECCHHH-HHHHHHHHHh---cCCcEEEEecCCCHHHHHHHHHhCC
Confidence 46789999999 999999999998 4779999999987643 2222111110 0010000 1111124566777788
Q ss_pred EEEEcCCC
Q 019387 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~~pl 246 (342)
+|+.+.+.
T Consensus 191 vlVn~ag~ 198 (287)
T 1lu9_A 191 FVFTAGAI 198 (287)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 88888764
No 303
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.08 E-value=0.0096 Score=54.47 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=57.8
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|+|+| +|+||+.+++.+.+.=++++.+ +|+..+..... ..+.+. +... ++....++++++.++|+|+.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~---d~gel~---g~~~-gv~v~~dl~~ll~~~DVVIDf 80 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQ---DAGAFL---GKQT-GVALTDDIERVCAEADYLIDF 80 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTS---BTTTTT---TCCC-SCBCBCCHHHHHHHCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccc---cHHHHh---CCCC-CceecCCHHHHhcCCCEEEEc
Confidence 4899999 9999999999875556888876 68764321000 000000 1111 334457999999999999988
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
.+ |+... +-.-..++.|.-+|-...|
T Consensus 81 T~--p~a~~---~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 81 TL--PEGTL---VHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp SC--HHHHH---HHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHHH---HHHHHHHHcCCCEEEECCC
Confidence 75 33211 1111223455556655555
No 304
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.06 E-value=0.022 Score=54.20 Aligned_cols=97 Identities=11% Similarity=0.209 Sum_probs=54.7
Q ss_pred CCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
..+|||+| +|.||+.+++.|.+.=.+++.+.....+.. .++...++.+ ...-.....+ .+ ++.+.++|+|+.|
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~-~~~v~~dl~~---~~-~~~~~~vDvVf~a 89 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHL-RAQKLPTLVS---VK-DADFSTVDAVFCC 89 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGG-TTSCCCCCBC---GG-GCCGGGCSEEEEC
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchh-cCccccccee---cc-hhHhcCCCEEEEc
Confidence 35899999 999999999997433346877765432211 1111111111 0000001111 12 4456789999999
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
+|... ..+.....+.|+.+|+.+-
T Consensus 90 tp~~~------s~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 90 LPHGT------TQEIIKELPTALKIVDLSA 113 (359)
T ss_dssp CCTTT------HHHHHHTSCTTCEEEECSS
T ss_pred CCchh------HHHHHHHHhCCCEEEECCc
Confidence 98432 2333333377999999874
No 305
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.05 E-value=0.026 Score=53.47 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=62.2
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh-----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~----- 235 (342)
.|++|.|+|.|.||..+++. ++.+|+ +|++.+++++..... ..+ +.... .... ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~ql-a~~~Ga~~Vi~~~~~~~~~~~~--~~l-------Ga~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMG-CKAAGAARIIGVDINKDKFAKA--KEV-------GATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEECSCGGGHHHH--HHT-------TCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEcCCHHHHHHH--HHh-------CCceEecccccchhHHHHHHHHhCC
Confidence 48899999999999999998 589999 899999876543111 111 11110 1111 123444333
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaR 273 (342)
..|+|+.++.. +++ -...++.++++ ..+|.++-
T Consensus 261 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 261 GVDFSFEVIGR-LDT----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHHBCTTTCEEEECSC
T ss_pred CCcEEEECCCC-HHH----HHHHHHHhhcCCcEEEEecc
Confidence 47999998863 221 24567889998 89998873
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.04 E-value=0.0084 Score=51.31 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=59.8
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCH-HHHh-----h
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSM-DEVL-----R 235 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l-~~ll-----~ 235 (342)
.|++|.|.| .|.||+.+++.+ +..|++|++.+++++.. +.. ... +.... .... .+. +++. .
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~-~~~-~~~-------g~~~~~d~~~-~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIA-KMIGARIYTTAGSDAKR-EML-SRL-------GVEYVGDSRS-VDFADEILELTDGY 106 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHH-HHHTCEEEEEESSHHHH-HHH-HTT-------CCSEEEETTC-STHHHHHHHHTTTC
T ss_pred CCCEEEEeeCCChHHHHHHHHH-HHcCCEEEEEeCCHHHH-HHH-HHc-------CCCEEeeCCc-HHHHHHHHHHhCCC
Confidence 488999999 699999999986 78899999999876432 111 111 11100 1111 122 2222 1
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
..|+++.+.. .+ .-...+..|++|..+|+++...
T Consensus 107 ~~D~vi~~~g--~~----~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 107 GVDVVLNSLA--GE----AIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp CEEEEEECCC--TH----HHHHHHHTEEEEEEEEECSCGG
T ss_pred CCeEEEECCc--hH----HHHHHHHHhccCCEEEEEcCCC
Confidence 3788887764 12 2356778889999999987543
No 307
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.03 E-value=0.011 Score=55.46 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=45.2
Q ss_pred CeEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc---CCEE
Q 019387 166 QTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~-~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---aDiV 240 (342)
.+|||||+|.||+ ..++.+.+.-+++|. ++|+..+. .+...+.++++++.. .|+|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~--------------------~g~~~~~~~~~ll~~~~~vD~V 85 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV--------------------EGVNSYTTIEAMLDAEPSIDAV 85 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC--------------------TTSEEESSHHHHHHHCTTCCEE
T ss_pred ceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh--------------------cCCCccCCHHHHHhCCCCCCEE
Confidence 5899999999998 688876433378876 47776432 112245799999976 8999
Q ss_pred EEcCCC
Q 019387 241 SLHPVL 246 (342)
Q Consensus 241 ~l~~pl 246 (342)
++|+|.
T Consensus 86 ~i~tp~ 91 (330)
T 4ew6_A 86 SLCMPP 91 (330)
T ss_dssp EECSCH
T ss_pred EEeCCc
Confidence 999994
No 308
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.03 E-value=0.0054 Score=54.02 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=45.6
Q ss_pred CeEEEEecCHHHHHHHHHH-HhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-cCCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMM-VEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l-~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~aDiV~l 242 (342)
++++|+|.|++|+.+++.+ ... |+++. ++|..+..... ......+...++++++++ +.|+|++
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~-------------~i~gv~V~~~~dl~ell~~~ID~ViI 146 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGR-------------PVRGGVIEHVDLLPQRVPGRIEIALL 146 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTC-------------EETTEEEEEGGGHHHHSTTTCCEEEE
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhh-------------hhcCCeeecHHhHHHHHHcCCCEEEE
Confidence 5799999999999999852 134 88877 47876643200 001112223568899886 5899999
Q ss_pred cCCC
Q 019387 243 HPVL 246 (342)
Q Consensus 243 ~~pl 246 (342)
|+|.
T Consensus 147 A~Ps 150 (211)
T 2dt5_A 147 TVPR 150 (211)
T ss_dssp CSCH
T ss_pred eCCc
Confidence 9994
No 309
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.03 E-value=0.023 Score=53.93 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~d 196 (342)
.+|||+|+|.||+.+.|.|...=+++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 3899999999999999987432368887654
No 310
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.02 E-value=0.011 Score=55.26 Aligned_cols=95 Identities=12% Similarity=0.154 Sum_probs=61.9
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHHHHh----hcCC
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVL----READ 238 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll----~~aD 238 (342)
.|++|.|+|.|.||..+++.+ +.+|++|++.+++++..... ..+ +.... ... ..++.+.+ ...|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~~--~~l-------Ga~~~~d~~-~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDIGDEKLELA--KEL-------GADLVVNPL-KEDAAKFMKEKVGGVH 232 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHHHH--HHT-------TCSEEECTT-TSCHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHHH--HHC-------CCCEEecCC-CccHHHHHHHHhCCCC
Confidence 478999999999999999985 89999999999876543111 111 11100 011 12333222 4689
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
+|+.+.... + .-...++.++++..+|.++..
T Consensus 233 ~vid~~g~~-~----~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 233 AAVVTAVSK-P----AFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp EEEESSCCH-H----HHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCCH-H----HHHHHHHHhhcCCEEEEeccc
Confidence 999887631 1 124567888899999988753
No 311
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.01 E-value=0.009 Score=58.66 Aligned_cols=43 Identities=16% Similarity=0.229 Sum_probs=37.1
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE 204 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~ 204 (342)
..+.|++|.|||.|.+|.+.++.| ...|++|.++|+.......
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L-~~~ga~V~vi~~~~~~~~~ 50 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLL-LEAGARLTVNALTFIPQFT 50 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHH-HHTTBEEEEEESSCCHHHH
T ss_pred EECCCCEEEEECCCHHHHHHHHHH-HhCcCEEEEEcCCCCHHHH
Confidence 568899999999999999999998 5789999999987655433
No 312
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.01 E-value=0.015 Score=55.55 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=48.9
Q ss_pred CeEEEEecC-HHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEEE
Q 019387 166 QTVGVIGAG-RIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvgIvG~G-~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV~ 241 (342)
.+|||||+| .+|+..++.+.+.-++++. ++|+.++.. +.+.+.+ + +..+.++++++.+ .|+|+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~ell~~~~vD~V~ 69 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVR-ERFGKEY-------G-----IPVFATLAEMMQHVQMDAVY 69 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHH-HHHHHHH-------T-----CCEESSHHHHHHHSCCSEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------C-----CCeECCHHHHHcCCCCCEEE
Confidence 479999999 9999999887433477877 578876532 2222222 1 2245799999985 89999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+++|..
T Consensus 70 i~tp~~ 75 (387)
T 3moi_A 70 IASPHQ 75 (387)
T ss_dssp ECSCGG
T ss_pred EcCCcH
Confidence 999953
No 313
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.00 E-value=0.025 Score=53.52 Aligned_cols=95 Identities=16% Similarity=0.060 Sum_probs=62.2
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh-----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~----- 235 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.++++++.... ..+ +.... .... ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~~~a--~~l-------Ga~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVG-CKAAGASRIIGVGTHKDKFPKA--IEL-------GATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHTCSEEEEECSCGGGHHHH--HHT-------TCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEECCCHHHHHHH--HHc-------CCcEEEecccccchHHHHHHHHhCC
Confidence 48899999999999999998 589999 899998876543111 111 21111 1111 023444332
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaR 273 (342)
..|+|+-+... +++ -...++.++++ ..+|.++-
T Consensus 261 g~Dvvid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 261 GVDYAVECAGR-IET----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHHhcCCCEEEEEcc
Confidence 58999998863 221 24668889998 89998874
No 314
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.00 E-value=0.015 Score=54.95 Aligned_cols=70 Identities=19% Similarity=0.298 Sum_probs=45.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhcC--------CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGF--------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~af--------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 236 (342)
-+|||||+|.||+.-++.+ +.+ +++|. ++|++++. .+++.+.| +.. ..+.++++++++
T Consensus 26 irvgiIG~G~ig~~H~~a~-~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~-------g~~----~~y~d~~ell~~ 92 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAW-NAVKTVFGDVERPRLVHLAEANAGL-AEARAGEF-------GFE----KATADWRALIAD 92 (393)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTHHHHHCSSCCCEEEEEECC--TT-HHHHHHHH-------TCS----EEESCHHHHHHC
T ss_pred ccEEEEcCCHHHHHHHHHH-HhhhhhhccCCCcEEEEEECCCHHH-HHHHHHHh-------CCC----eecCCHHHHhcC
Confidence 4899999999999776654 332 56766 57887653 33333333 111 235799999964
Q ss_pred --CCEEEEcCCCCc
Q 019387 237 --ADVISLHPVLDK 248 (342)
Q Consensus 237 --aDiV~l~~pl~~ 248 (342)
-|+|++|+|..-
T Consensus 93 ~~iDaV~IatP~~~ 106 (393)
T 4fb5_A 93 PEVDVVSVTTPNQF 106 (393)
T ss_dssp TTCCEEEECSCGGG
T ss_pred CCCcEEEECCChHH
Confidence 689999999533
No 315
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.00 E-value=0.029 Score=52.46 Aligned_cols=109 Identities=16% Similarity=0.236 Sum_probs=61.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.++|+|+|.|.||..+|..|+ .-|. +|..+|..++.. +.............+ .+.......+ .+.+++||+|+++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~-~~~~~~v~l~Di~~~~~-~g~a~dL~~~~~~~~-~~~~v~~t~d-~~a~~~aDvVIi~ 80 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLAL-IKQLGDVVLFDIAQGMP-NGKALDLLQTCPIEG-VDFKVRGTND-YKDLENSDVVIVT 80 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCCEEEESC-GGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCChHHH-HHHHHHHHhhhhhcC-CCcEEEEcCC-HHHHCCCCEEEEc
Confidence 468999999999999998874 3344 999999987532 111110000000000 0111211233 3678999999999
Q ss_pred CCCCcccccc-----c--CH-------HHHhcCCCCcEEEEcCCCcccCHH
Q 019387 244 PVLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSRGPVIDEV 280 (342)
Q Consensus 244 ~pl~~~t~~l-----i--~~-------~~l~~mk~ga~lINvaRG~~vd~~ 280 (342)
.+. +...++ + |. +.+....|++++++++ ..+|.-
T Consensus 81 ag~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 128 (321)
T 3p7m_A 81 AGV-PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIM 128 (321)
T ss_dssp CSC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred CCc-CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHH
Confidence 753 322222 1 11 2233345789999995 455443
No 316
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.00 E-value=0.065 Score=51.92 Aligned_cols=114 Identities=18% Similarity=0.234 Sum_probs=71.8
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCc---------hhHHHHHHhhhhhhhhccCCCCccc-cccCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ---------ATRLEKFVTAYGQFLKANGEQPVTW-KRASS 229 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 229 (342)
.++.|+||.|-|+|++|+.+|+.| ...|++|+ +.|.+. ...+..+.+ ..+.. ..+ ....+
T Consensus 217 ~~l~g~~vaVqG~GnVG~~aa~~l-~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~-------~~g~i-~~~~a~~~~ 287 (424)
T 3k92_A 217 IKLQNARIIIQGFGNAGSFLAKFM-HDAGAKVIGISDANGGLYNPDGLDIPYLLDKRD-------SFGMV-TNLFTDVIT 287 (424)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHH-HHHTCEEEEEECSSCEEECTTCCCHHHHHHHCC-------SSSCC-GGGCSCCBC
T ss_pred CCcccCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHHH-------HhCCC-CCCCcEEec
Confidence 468999999999999999999997 57899986 455541 111111111 11100 000 11123
Q ss_pred HHHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 019387 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 230 l~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i 291 (342)
-++++ ..||+++-|.. .+.|+.+....++ -.+++-.+-+++ ..+ -.+.|++..|
T Consensus 288 ~~~i~~~~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~e-A~~iL~~rGI 342 (424)
T 3k92_A 288 NEELLEKDCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TID-ATKILNERGV 342 (424)
T ss_dssp HHHHHHSCCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHH-HHHHHHHTTC
T ss_pred CccceeccccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CHH-HHHHHHHCCC
Confidence 35544 56999998764 4677777777774 568888889986 443 3566766555
No 317
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=96.00 E-value=0.015 Score=54.69 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=25.8
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~ 198 (342)
+|||+|+|.||+.+.|.|...-.++|.+.+-.
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 79999999999999998754456888876543
No 318
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.99 E-value=0.0085 Score=56.92 Aligned_cols=96 Identities=19% Similarity=0.285 Sum_probs=62.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~aDiV~l 242 (342)
.|.+|.|+|.|.||...++. ++.+|++|++.+++++..... ..+ +.... .....+.++++....|+|+.
T Consensus 194 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~Vi~~~~~~~~~~~a--~~l-------Ga~~vi~~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKL-AHAMGAHVVAFTTSEAKREAA--KAL-------GADEVVNSRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCEEEEEESSGGGHHHH--HHH-------TCSEEEETTCHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHCCCEEEEEeCCHHHHHHH--HHc-------CCcEEeccccHHHHHHhhcCCCEEEE
Confidence 48899999999999999998 589999999999876543111 111 11110 00000012233356899998
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
++.... .-...++.++++..+|.++-.
T Consensus 264 ~~g~~~-----~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 264 TVAAPH-----NLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp CCSSCC-----CHHHHHTTEEEEEEEEECCCC
T ss_pred CCCCHH-----HHHHHHHHhccCCEEEEeccC
Confidence 886421 124567888999999988743
No 319
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.97 E-value=0.0092 Score=58.89 Aligned_cols=129 Identities=14% Similarity=0.248 Sum_probs=73.3
Q ss_pred CCeEEEEecCHH-HHHHHHHHHh---cC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 165 gktvgIvG~G~I-G~~vA~~l~~---af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
..+|+|||.|.. |.++|..|++ ++ +-+|..||+.++. .+...+.-.......+ .+..+....++++.+++||+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~-~~~~~~~~~~~l~~~~-~~~~I~~t~D~~eal~~AD~ 105 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKER-QDRIAGACDVFIREKA-PDIEFAATTDPEEAFTDVDF 105 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHH-HHHHHHHHHHHHHHHC-TTSEEEEESCHHHHHSSCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCC-CCCEEEEECCHHHHHcCCCE
Confidence 358999999998 6667655543 45 6689999998753 2221111001111111 12333344688889999999
Q ss_pred EEEcCCCCcc---cc--------ccc--------------------C--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 019387 240 ISLHPVLDKT---TY--------HLI--------------------N--KERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 240 V~l~~pl~~~---t~--------~li--------------------~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL 286 (342)
|++++|.... ++ +++ - .+.+....|+|++||++-.--+-..++.+..
T Consensus 106 VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~ 185 (472)
T 1u8x_X 106 VMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLR 185 (472)
T ss_dssp EEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHS
T ss_pred EEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999986321 11 111 0 1234445689999999865534344444433
Q ss_pred HcCCceEEE
Q 019387 287 KQNPMFRVG 295 (342)
Q Consensus 287 ~~g~i~~aa 295 (342)
-..++.|.+
T Consensus 186 p~~rViG~c 194 (472)
T 1u8x_X 186 PNSKILNIC 194 (472)
T ss_dssp TTCCEEECC
T ss_pred CCCCEEEeC
Confidence 233555543
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.97 E-value=0.033 Score=52.21 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=62.0
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cC---CHHHHh----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-AS---SMDEVL---- 234 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~---~l~~ll---- 234 (342)
.|++|.|+|.|.+|..+++. ++.+|++|++.+++++... . ...+ +.... .... .+ .+.+..
T Consensus 168 ~g~~VlV~GaG~vG~~a~ql-a~~~Ga~Vi~~~~~~~~~~-~-~~~l-------Ga~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLA-AKAYGAFVVCTARSPRRLE-V-AKNC-------GADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCEEEEEESCHHHHH-H-HHHT-------TCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCEEEEEcCCHHHHH-H-HHHh-------CCCEEEcCcccccHHHHHHHHhcccc
Confidence 47899999999999999998 5899999999988765421 1 1111 11100 0010 11 122333
Q ss_pred -hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 235 -~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
...|+|+.+.... .+ -...++.++++..+|.++-+
T Consensus 238 g~g~D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 238 GDLPNVTIDCSGNE-KC----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SSCCSEEEECSCCH-HH----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCCCEEEECCCCH-HH----HHHHHHHHhcCCEEEEEecC
Confidence 2589999988632 11 24567889999999998753
No 321
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.97 E-value=0.012 Score=55.55 Aligned_cols=94 Identities=14% Similarity=0.011 Sum_probs=61.3
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHH----Hhh--cC
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR--EA 237 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----ll~--~a 237 (342)
.|++|.|+|.|.||...++. ++.+|++|++.+++++.... ...+ +....-.....++.+ +.. ..
T Consensus 189 ~g~~VlV~G~G~vG~~a~ql-a~~~Ga~Vi~~~~~~~~~~~--~~~l-------Ga~~vi~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQI-AKATGAEVIVTSSSREKLDR--AFAL-------GADHGINRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHH-HHHTTCEEEEEESCHHHHHH--HHHH-------TCSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCEEEEEecCchhHHH--HHHc-------CCCEEEcCCcccHHHHHHHHhCCCCc
Confidence 58899999999999999998 48999999999987654311 1111 111110011123332 222 58
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+|+-|... + .-...++.+++|..++.++-
T Consensus 259 D~vid~~g~--~----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 259 DHILEIAGG--A----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEEEETTS--S----CHHHHHHHEEEEEEEEEECC
T ss_pred eEEEECCCh--H----HHHHHHHHhhcCCEEEEEec
Confidence 999988762 1 23557788899999988863
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.96 E-value=0.017 Score=54.29 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=61.5
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccccc----CCH-HHHh---
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA----SSM-DEVL--- 234 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l-~~ll--- 234 (342)
.|++|.|+|.|.+|...++. ++.+|+ +|++.+++++.. +. ...+ +... .+... .++ +++.
T Consensus 171 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~-~~-a~~l-------Ga~~-vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLV-AKAMGAAQVVVTDLSATRL-SK-AKEI-------GADL-VLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEEESCHHHH-HH-HHHT-------TCSE-EEECSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEECCCHHHH-HH-HHHh-------CCCE-EEcCcccccchHHHHHHHHh
Confidence 47899999999999999998 589999 999999876542 11 1111 1111 11110 111 1222
Q ss_pred -hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 235 -~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
...|+|+.+.... .+ -...++.+++|..++.++-+
T Consensus 240 ~~g~D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 240 GCKPEVTIECTGAE-AS----IQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp TSCCSEEEECSCCH-HH----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCCCEEEECCCCh-HH----HHHHHHHhcCCCEEEEEecC
Confidence 2589999988632 11 24567889999999998743
No 323
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.95 E-value=0.01 Score=55.48 Aligned_cols=94 Identities=14% Similarity=0.176 Sum_probs=60.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh----cCCE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR----EADV 239 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~----~aDi 239 (342)
.|++|.|.|.|.||...++. ++.+|++|++.++++++.. +...+ +....-.....++.+.+. ..|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~ql-a~~~Ga~Vi~~~~~~~~~~--~~~~l-------Ga~~~i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQY-ARAMGLRVAAVDIDDAKLN--LARRL-------GAEVAVNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHH-HHHTTCEEEEEESCHHHHH--HHHHT-------TCSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHCCCeEEEEeCCHHHHH--HHHHc-------CCCEEEeCCCcCHHHHHHHhCCCCCE
Confidence 48899999999999999998 5899999999998765431 11111 211110001123333332 5799
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
|+.+.... + .-...++.++++..++.++
T Consensus 236 vid~~g~~-~----~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 236 VLVTAVSP-K----AFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEESSCCH-H----HHHHHHHHEEEEEEEEECS
T ss_pred EEEeCCCH-H----HHHHHHHHhccCCEEEEeC
Confidence 98887532 1 1245667788888888876
No 324
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.94 E-value=0.012 Score=54.18 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=65.8
Q ss_pred CCeEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEE
Q 019387 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 165 gktvgIvG~-G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV 240 (342)
.++|.|+|. |++|+.+++.+ +..|++++ .++|.... ....+...+.+++++.. ..|++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l-~~~g~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~~~Dv~ 68 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQM-LTYGTKIVAGVTPGKGG-----------------MEVLGVPVYDTVKEAVAHHEVDAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHSCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHH-HHcCCeEEEEECCCCCC-----------------ceECCEEeeCCHHHHhhcCCCCEE
Confidence 468999999 99999999987 56788854 56664310 00123345678999988 89999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCc-EEEEcCCCcc-cCHHHHHHHHHcCCce
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEA-ILVNCSRGPV-IDEVALVEHLKQNPMF 292 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga-~lINvaRG~~-vd~~aL~~aL~~g~i~ 292 (342)
++++|- +.+...+.+ ..+ .|. .+|..+-|=. -+++.|.++.++..+.
T Consensus 69 Ii~vp~-~~~~~~~~e-a~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 69 IIFVPA-PAAADAALE-AAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp EECCCH-HHHHHHHHH-HHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred EEecCH-HHHHHHHHH-HHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 999983 233333332 222 232 2455554422 2345788888765554
No 325
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.94 E-value=0.028 Score=53.05 Aligned_cols=80 Identities=14% Similarity=0.112 Sum_probs=44.6
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHh-hhhhhhhc-cC---CCCccccccCCHHHHhhcCCEE
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVT-AYGQFLKA-NG---EQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~l~~ll~~aDiV 240 (342)
+|||+|+|.||+.+++.|.+.=++++.+ .|+.+......... .+.. ... .. -...++....++++++.++|+|
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRI-YVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCE-ECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcce-ecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 7999999999999999874334678775 56553321111100 0000 000 00 0000011123566777889999
Q ss_pred EEcCCCC
Q 019387 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~~pl~ 247 (342)
+.|+|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999853
No 326
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.94 E-value=0.034 Score=50.81 Aligned_cols=109 Identities=15% Similarity=0.201 Sum_probs=64.8
Q ss_pred cccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc----cccccCCHHHHhh
Q 019387 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV----TWKRASSMDEVLR 235 (342)
Q Consensus 161 ~~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~ll~ 235 (342)
..+.||++.|.|- |.||+++|+.|+ .-|++|++.+++.....+...+. ....+.... ......++++++.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEGDANETKQY----VEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHH----HHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHH----HHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 4689999999996 789999999985 67999999988765432222111 111111100 1111123344443
Q ss_pred -------cCCEEEEcCCCCcccc----------------c-----ccCHHHHhcCCCCcEEEEcCCC
Q 019387 236 -------EADVISLHPVLDKTTY----------------H-----LINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 236 -------~aDiV~l~~pl~~~t~----------------~-----li~~~~l~~mk~ga~lINvaRG 274 (342)
.-|+++.+.-...... + .+.+..+..|+++..+||++..
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~ 184 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI 184 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence 5799988754321100 0 1224566788888899998754
No 327
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.94 E-value=0.011 Score=55.34 Aligned_cols=93 Identities=16% Similarity=0.090 Sum_probs=61.9
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc-ccCCHHHHhh-----c
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-RASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~-----~ 236 (342)
.|++|.|+|.|.+|..+++. ++.+|+ +|++.+++++.. +. .... ....+. ...++.+.+. .
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~-a~~~Ga~~Vi~~~~~~~~~-~~--------~~~l--a~~v~~~~~~~~~~~~~~~~~~g 231 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMV-VRASGAGPILVSDPNPYRL-AF--------ARPY--ADRLVNPLEEDLLEVVRRVTGSG 231 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHH-HHHTTCCSEEEECSCHHHH-GG--------GTTT--CSEEECTTTSCHHHHHHHHHSSC
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEECCCHHHH-HH--------HHHh--HHhccCcCccCHHHHHHHhcCCC
Confidence 68999999999999999998 589999 999999876532 11 1110 011111 1124444333 5
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.+.... ++ -...++.++++..+|.++-
T Consensus 232 ~D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 232 VEVLLEFSGNE-AA----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEEEECSCCH-HH----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCCH-HH----HHHHHHHHhcCCEEEEEec
Confidence 79999888631 11 2456788899999998864
No 328
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.93 E-value=0.21 Score=45.94 Aligned_cols=69 Identities=16% Similarity=0.089 Sum_probs=50.7
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.+.|.+|+++|= +++.++.+..+ ..||++|.+..|..-.. +. .. ..++....++++.++++|
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~p-~~--------~~-----~~g~~~~~d~~eav~~aD 207 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLL-NMFGAKIGVCGPKTLIP-RD--------VE-----VFKVDVFDDVDKGIDWAD 207 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGSC-TT--------GG-----GGCEEEESSHHHHHHHCS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HHCCCEEEEECCchhCC-ch--------HH-----HCCCEEEcCHHHHhCCCC
Confidence 378999999996 89999999987 57999999988743211 00 00 012334579999999999
Q ss_pred EEEEcCCC
Q 019387 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~~pl 246 (342)
+|.. +..
T Consensus 208 vvy~-~~~ 214 (291)
T 3d6n_B 208 VVIW-LRL 214 (291)
T ss_dssp EEEE-CCC
T ss_pred EEEE-eCc
Confidence 9988 554
No 329
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.93 E-value=0.036 Score=51.60 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=61.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~a-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
..+|+|+|.|.+|.++|..|+.. +.-+|..||..++. .+........-. .....+..+.. +..+.+++||+|+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~-~~g~~~dl~~~~-~~~~~~~~v~~--~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEK-VRGDVMDLKHAT-PYSPTTVRVKA--GEYSDCHDADLVVIC 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHH-HHHHHHHHHHHG-GGSSSCCEEEE--CCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhH-hhhhhhhHHhhh-hhcCCCeEEEe--CCHHHhCCCCEEEEC
Confidence 35899999999999999887532 33489999987532 222111110000 00001111211 335668999999999
Q ss_pred CCCCcccccc------------cC--HHHHhcCCCCcEEEEcCCCcccCH
Q 019387 244 PVLDKTTYHL------------IN--KERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 244 ~pl~~~t~~l------------i~--~~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
.+.. ...+. +- .+.+....|++.+++++ ..+|.
T Consensus 82 ag~~-~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~ 128 (317)
T 3d0o_A 82 AGAA-QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDI 128 (317)
T ss_dssp CCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCCC-CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHH
Confidence 8653 22221 11 12333447899999986 44443
No 330
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.93 E-value=0.0097 Score=56.28 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=46.9
Q ss_pred CeEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEEE
Q 019387 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~-vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV~ 241 (342)
.+|||||+|.||+. .++.+.+.-++++. ++|+.++.. . +.+ + ....+.++++++.. .|+|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~---~~~-------~----~~~~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELS-K---ERY-------P----QASIVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGG-G---TTC-------T----TSEEESCSHHHHTCTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH-H---HhC-------C----CCceECCHHHHhcCCCCCEEE
Confidence 48999999999997 67766333378876 578876431 1 001 0 22345799999987 89999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+|+|..
T Consensus 71 i~tp~~ 76 (362)
T 3fhl_A 71 VNTPDN 76 (362)
T ss_dssp ECSCGG
T ss_pred EeCChH
Confidence 999953
No 331
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.92 E-value=0.024 Score=53.12 Aligned_cols=99 Identities=20% Similarity=0.285 Sum_probs=59.4
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHH----HHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEK----FVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.++|+|+|.|.||..+|..|+ ..|. +|..+|...+. .+. ....+. +. ...... ..+..+.+++||
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~-~~~~~~~l~l~D~~~~k-~~g~a~DL~~~~~-~~----~~~v~i--~~~~~~a~~~aD 75 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI-NQGITDELVVIDVNKEK-AMGDVMDLNHGKA-FA----PQPVKT--SYGTYEDCKDAD 75 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHH-HHHHHHHHHHTGG-GS----SSCCEE--EEECGGGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEecchHH-HHHHHHHHHhccc-cc----cCCeEE--EeCcHHHhCCCC
Confidence 568999999999999999874 4454 99999997643 222 111110 00 001111 122235789999
Q ss_pred EEEEcCCCCcccccc-----c--CH-------HHHhcCCCCcEEEEcCC
Q 019387 239 VISLHPVLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 239 iV~l~~pl~~~t~~l-----i--~~-------~~l~~mk~ga~lINvaR 273 (342)
+|+++.+. +...+. + |. +.+....|++++++++-
T Consensus 76 vVvi~ag~-p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 76 IVCICAGA-NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp EEEECCSC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEEeccc-CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 99999763 332222 1 11 23444567899999984
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.92 E-value=0.025 Score=53.50 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=62.4
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh-----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~----- 235 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.+++++..... ..+ +.... .... ..++.+.+.
T Consensus 190 ~g~~VlV~GaG~vG~~avql-a~~~Ga~~Vi~~~~~~~~~~~~--~~l-------Ga~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMG-CKVAGASRIIGVDINKDKFARA--KEF-------GATECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHTCSEEEEECSCGGGHHHH--HHH-------TCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEcCCHHHHHHH--HHc-------CCceEeccccccccHHHHHHHHhCC
Confidence 48899999999999999998 589999 899998876543111 111 11110 0111 123444333
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaR 273 (342)
..|+|+.+... +++ -...++.++++ ..+|.++-
T Consensus 260 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 260 GVDYSFECIGN-VKV----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCc-HHH----HHHHHHhhccCCcEEEEEec
Confidence 48999998863 121 25668889999 89998874
No 333
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.92 E-value=0.0079 Score=58.97 Aligned_cols=76 Identities=9% Similarity=0.128 Sum_probs=49.6
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCCEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aDiV~ 241 (342)
.+++|+|+|.|.||+.+++.|+ ..|.+|.++|++.+.. +.....+. ..... ......++++++.++|+|+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~-~~G~~V~v~~R~~~~a-~~la~~~~------~~~~~~~Dv~d~~~l~~~l~~~DvVI 73 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESA-KKLSAGVQ------HSTPISLDVNDDAALDAEVAKHDLVI 73 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHH-TTTCEEEEEESSHHHH-HHTTTTCT------TEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCcCEEEEEECCHHHH-HHHHHhcC------CceEEEeecCCHHHHHHHHcCCcEEE
Confidence 3689999999999999999984 6789999999876432 21111000 00000 1111235668888999999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
.|.|..
T Consensus 74 n~a~~~ 79 (450)
T 1ff9_A 74 SLIPYT 79 (450)
T ss_dssp ECCC--
T ss_pred ECCccc
Confidence 999864
No 334
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.90 E-value=0.12 Score=50.51 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=108.5
Q ss_pred CCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEEEecCHHHHHHHHHHHhc
Q 019387 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (342)
Q Consensus 108 ~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgIvG~G~IG~~vA~~l~~a 187 (342)
..|+|.|+-- ..+|=.+++-+++.+|-. |..|...+|.|.|.|.-|-.+|+.| ..
T Consensus 186 ~~ipvFnDD~---qGTA~V~lAgllnAlki~---------------------gk~l~d~riV~~GAGaAGigia~ll-~~ 240 (487)
T 3nv9_A 186 CDIPVWHDDQ---QGTASVTLAGLLNALKLV---------------------KKDIHECRMVFIGAGSSNTTCLRLI-VT 240 (487)
T ss_dssp CSSCEEETTT---HHHHHHHHHHHHHHHHHH---------------------TCCGGGCCEEEECCSHHHHHHHHHH-HH
T ss_pred ccCCcccccc---chHHHHHHHHHHHHHHHh---------------------CCChhhcEEEEECCCHHHHHHHHHH-HH
Confidence 3799999874 456667788888887632 4578899999999999999999997 57
Q ss_pred CCc---EEEEEcCCc---hhH--HHHHH-hhhh-hhhhccCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHH
Q 019387 188 FKM---NLIYYDLYQ---ATR--LEKFV-TAYG-QFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKE 257 (342)
Q Consensus 188 fg~---~V~~~d~~~---~~~--~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~ 257 (342)
.|. +++.+|+.. ..+ ...+. ..+. .+..... . ....+|.|+++.+|+++=+-- . ..+.|+++
T Consensus 241 ~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n-~----~~~~~L~eav~~adVlIG~S~--~-~pg~ft~e 312 (487)
T 3nv9_A 241 AGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTN-P----SKFGSIAEACVGADVLISLST--P-GPGVVKAE 312 (487)
T ss_dssp TTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSC-T----TCCCSHHHHHTTCSEEEECCC--S-SCCCCCHH
T ss_pred cCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcc-c----ccCCCHHHHHhcCCEEEEecc--c-CCCCCCHH
Confidence 898 799999863 122 11100 0000 0111111 0 024689999999998765431 1 15899999
Q ss_pred HHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCC-ceEEEEecCCCCCCCcccccccc
Q 019387 258 RLATMKKEAILVNCSRGPV-IDEVALVEHLKQNP-MFRVGLDVFEVTELGFSSFKHIS 313 (342)
Q Consensus 258 ~l~~mk~ga~lINvaRG~~-vd~~aL~~aL~~g~-i~~aaLDV~~~EP~~~~~tPhia 313 (342)
.++.|.+..++.=.|.-.. +..++.+ +.|+ |.+-+---|.++=.|+++.|-|.
T Consensus 313 ~V~~Ma~~PIIFaLSNPtpEi~pe~A~---~~G~aIvATGrsd~PnQ~NN~liFPGI~ 367 (487)
T 3nv9_A 313 WIKSMGEKPIVFCCANPVPEIYPYEAK---EAGAYIVATGRGDFPNQVNNSVGFPGIL 367 (487)
T ss_dssp HHHTSCSSCEEEECCSSSCSSCHHHHH---HTTCSEEEESCTTSSSBCCGGGTHHHHH
T ss_pred HHHhhcCCCEEEECCCCCccCCHHHHH---HhCCEEEEECCCCCcccCcceeEcchhh
Confidence 9999999999988876543 2223333 3455 33333211222227888887763
No 335
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.89 E-value=0.034 Score=52.66 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=62.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh-----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~----- 235 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.++++++.... ..+ +.... .... ..++.+.+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~~~a--~~l-------Ga~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIG-CKIAGASRIIAIDINGEKFPKA--KAL-------GATDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEECSCGGGHHHH--HHT-------TCSEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEcCCHHHHHHH--HHh-------CCcEEEccccccchHHHHHHHHhCC
Confidence 48899999999999999998 589999 899999876543111 111 11110 1111 123444332
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaR 273 (342)
..|+|+-+... +++ -...++.+++| ..+|.++-
T Consensus 265 g~Dvvid~~G~-~~~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 265 GVDYSLDCAGT-AQT----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CBSEEEESSCC-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred CccEEEECCCC-HHH----HHHHHHHhhcCCCEEEEECC
Confidence 48999998863 121 24568889998 88888864
No 336
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.87 E-value=0.012 Score=55.75 Aligned_cols=95 Identities=18% Similarity=0.169 Sum_probs=61.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-------
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~------- 235 (342)
.|++|.|+|.|.+|...++. ++.+|+ +|++.+++++... +...+ +....-.....++.+.+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~~--~a~~l-------Ga~~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQL-ARLAGATTVILSTRQATKRR--LAEEV-------GATATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEECSCHHHHH--HHHHH-------TCSEEECTTSSCHHHHHHSTTSSST
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEECCCHHHHH--HHHHc-------CCCEEECCCCcCHHHHHHhhhhccC
Confidence 48899999999999999998 589999 8999988765431 11111 111110011234444443
Q ss_pred -cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 236 -EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 -~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
..|+|+-+... ++ .-...++.+++|..++.++-
T Consensus 252 gg~Dvvid~~G~-~~----~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 252 GGVDVVIECAGV-AE----TVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TCEEEEEECSCC-HH----HHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCC-HH----HHHHHHHHhccCCEEEEEec
Confidence 37999988753 21 12456778888988888864
No 337
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.86 E-value=0.0099 Score=54.56 Aligned_cols=92 Identities=16% Similarity=0.115 Sum_probs=60.4
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccccc--CCHHHHhhcCCEE
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLREADVI 240 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ll~~aDiV 240 (342)
.|++|.|+|. |.||+.+++.+ +.+|++|++.+++++..... ..+ +.... +... .++.+.+...|+|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~~--~~~-------ga~~~-~~~~~~~~~~~~~~~~d~v 193 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVA-RAMGLRVLAAASRPEKLALP--LAL-------GAEEA-ATYAEVPERAKAWGGLDLV 193 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSGGGSHHH--HHT-------TCSEE-EEGGGHHHHHHHTTSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--Hhc-------CCCEE-EECCcchhHHHHhcCceEE
Confidence 4789999998 99999999985 89999999999876543111 111 11111 1111 1233334678999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
+. ... + .-...++.|+++..++.++-
T Consensus 194 id-~g~--~----~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 194 LE-VRG--K----EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EE-CSC--T----THHHHHTTEEEEEEEEEC--
T ss_pred EE-CCH--H----HHHHHHHhhccCCEEEEEeC
Confidence 98 653 1 23567888999999998874
No 338
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.85 E-value=0.018 Score=54.03 Aligned_cols=116 Identities=16% Similarity=0.225 Sum_probs=69.5
Q ss_pred eEEEEecCHHHHHHHHHHHhc--------CCcEEEE-EcCCchhH----HHHHHhhhhhhhhccCCCCccccccCCHHHH
Q 019387 167 TVGVIGAGRIGSAYARMMVEG--------FKMNLIY-YDLYQATR----LEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a--------fg~~V~~-~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 233 (342)
+|||+|+|.||+.+++.+.+. .+.+|.+ +|+++... ...+.... . ... . +....+++++
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~---~-~~~--~--~~~~~d~~~l 75 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMK---R-ETG--M--LRDDAKAIEV 75 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHH---H-HHS--S--CSBCCCHHHH
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhh---c-cCc--c--ccCCCCHHHH
Confidence 799999999999999987443 6788775 56654321 11111100 0 000 0 0002388999
Q ss_pred hhc--CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCc
Q 019387 234 LRE--ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (342)
Q Consensus 234 l~~--aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~v-d~~aL~~aL~~g~i 291 (342)
+.+ .|+|+.|+|...++.. .-.-....++.|.-+|-..-+.+. .-+.|.++.++.+.
T Consensus 76 l~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 76 VRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp HHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 864 8999999995433222 223456778888888877655553 45667776665544
No 339
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.85 E-value=0.017 Score=54.45 Aligned_cols=30 Identities=30% Similarity=0.565 Sum_probs=24.3
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d 196 (342)
+|||+|+|+||+.++|.|...=+++|.+..
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 799999999999999987432378877654
No 340
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.83 E-value=0.017 Score=55.53 Aligned_cols=70 Identities=24% Similarity=0.346 Sum_probs=47.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhc--------CCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-
Q 019387 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~a--------fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~- 235 (342)
-+|||||+|.||+.-++.+.+. -+++|. ++|++++. .+++.+.| +.. ..+.+++++++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~-a~~~a~~~-------~~~----~~y~d~~~ll~~ 94 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAM-AERHAAKL-------GAE----KAYGDWRELVND 94 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHH-HHHHHHHH-------TCS----EEESSHHHHHHC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHH-HHHHHHHc-------CCC----eEECCHHHHhcC
Confidence 3899999999999888766321 146766 57887653 33333333 111 23579999996
Q ss_pred -cCCEEEEcCCCC
Q 019387 236 -EADVISLHPVLD 247 (342)
Q Consensus 236 -~aDiV~l~~pl~ 247 (342)
+-|+|++|+|..
T Consensus 95 ~~vD~V~I~tp~~ 107 (412)
T 4gqa_A 95 PQVDVVDITSPNH 107 (412)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEECCCcH
Confidence 578999999953
No 341
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.82 E-value=0.013 Score=55.36 Aligned_cols=96 Identities=15% Similarity=0.191 Sum_probs=62.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~aDiV~l 242 (342)
.|++|.|+|.|.||...++. ++.+|++|++.+++++..... ...+ +.... .....+.+.++....|+|+-
T Consensus 180 ~g~~VlV~GaG~vG~~a~ql-ak~~Ga~Vi~~~~~~~~~~~~-~~~l-------Ga~~vi~~~~~~~~~~~~~g~D~vid 250 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKI-AKAMGHHVTVISSSNKKREEA-LQDL-------GADDYVIGSDQAKMSELADSLDYVID 250 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHTCEEEEEESSTTHHHHH-HTTS-------CCSCEEETTCHHHHHHSTTTEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHCCCeEEEEeCChHHHHHH-HHHc-------CCceeeccccHHHHHHhcCCCCEEEE
Confidence 58899999999999999998 588999999999876543111 1011 11111 00000122333346899998
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
++.... .-...++.++++..++.++-
T Consensus 251 ~~g~~~-----~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 251 TVPVHH-----ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCCSCC-----CSHHHHTTEEEEEEEEECSC
T ss_pred CCCChH-----HHHHHHHHhccCCEEEEeCC
Confidence 886321 12456788899999998874
No 342
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.78 E-value=0.053 Score=53.07 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=65.7
Q ss_pred cccCCCeEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCH
Q 019387 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 161 ~~L~gktvgIvG~G----------~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
..+.|++|+|+|+- .=...+++.| ...|++|.+|||........ .|+ .......++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~----------~~~~~~~~~ 379 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKL-LEVGCRVRVYDPVAMKEAQK---RLG----------DKVEYTTDM 379 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSCHHHHHH---HHG----------GGSEECSSH
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCcHHHHH---hcC----------ccceecCCH
Confidence 45799999999984 3467889987 68999999999987532111 111 012234688
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHHH-HhcCCCCcEEEEcCCCc
Q 019387 231 DEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGP 275 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t~~li~~~~-l~~mk~ga~lINvaRG~ 275 (342)
++.++++|.|+++++= ++-+. ++-+. .+.|+ +.+++|+ |+-
T Consensus 380 ~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 380 YDAVRGAEALFHVTEW-KEFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp HHHTTTCSCEEECSCC-GGGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred HHHhcCCCEEEEccCC-HHHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 9999999999999863 33333 34443 44566 5688885 653
No 343
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.77 E-value=0.0088 Score=52.70 Aligned_cols=70 Identities=20% Similarity=0.232 Sum_probs=46.8
Q ss_pred CCeEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCch-hHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCE
Q 019387 165 GQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADV 239 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~-~afg~~V~-~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDi 239 (342)
.++++|+|.|++|+.+++.+. +..|+++. ++|..+. .... +......+...+++++++++ .|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~------------~~i~GvpV~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGK------------TTEDGIPVYGISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTC------------BCTTCCBEEEGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCc------------eeECCeEEeCHHHHHHHHHHcCCCE
Confidence 358999999999999998621 34688877 4787765 3200 00112223345788888874 899
Q ss_pred EEEcCCC
Q 019387 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~~pl 246 (342)
+++|+|.
T Consensus 152 vIIAvPs 158 (212)
T 3keo_A 152 AILTVPS 158 (212)
T ss_dssp EEECSCG
T ss_pred EEEecCc
Confidence 9999995
No 344
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.77 E-value=0.017 Score=54.67 Aligned_cols=30 Identities=27% Similarity=0.223 Sum_probs=23.8
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYY 195 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~~ 195 (342)
.+|||+|+|+||+.+++.|...=++++.+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV 32 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGV 32 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEE
Confidence 379999999999999998743236887754
No 345
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.75 E-value=0.02 Score=50.17 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=50.8
Q ss_pred cccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCC-CCccccccCCHHHHhhcCC
Q 019387 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 161 ~~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ll~~aD 238 (342)
..+.|++|.|.|- |.||+.+++.|+ .-|.+|++.+++++... .... .+. .....+...++.+.+.++|
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~~~~~~-~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGP-ELRE--------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSGGGHH-HHHH--------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECChHHHH-HHHh--------CCCceEEEcccHHHHHHHHcCCC
Confidence 5689999999998 999999999984 67999999999875422 1110 011 1010011156778889999
Q ss_pred EEEEcCCCC
Q 019387 239 VISLHPVLD 247 (342)
Q Consensus 239 iV~l~~pl~ 247 (342)
+|+.+....
T Consensus 87 ~vi~~ag~~ 95 (236)
T 3e8x_A 87 AVVFAAGSG 95 (236)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999887654
No 346
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.73 E-value=0.04 Score=53.66 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=63.8
Q ss_pred ccCCCeEEEEecC----------HHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCH
Q 019387 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 162 ~L~gktvgIvG~G----------~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
.+.|++|+|+|+- .-...+++.| ... |++|.+|||..... ....++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L-~~~~g~~V~~~DP~~~~~----------------------~~~~~~ 368 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELL-NQEPDIEVCAYDPHVELD----------------------FVEHDM 368 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHH-HHSTTCEEEEECSSCCCT----------------------TBCSTT
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHH-HhhcCCEEEEECCCcccc----------------------cccCCH
Confidence 4789999999974 3467889987 677 99999999986431 123678
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc
Q 019387 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~ 276 (342)
++.++++|.|+++.+= ++-+. ++.+.++.|+ +.+++|+ |+-+
T Consensus 369 ~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 369 SHAVKDASLVLILSDH-SEFKN-LSDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp HHHHTTCSEEEECSCC-GGGTS-CCGGGGTTCS-SCEEEES-SCCC
T ss_pred HHHHhCCCEEEEecCC-HHHhc-cCHHHHHhCC-CCEEEEC-CCCC
Confidence 8999999999999863 33332 3444557777 6788886 5543
No 347
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.73 E-value=0.0087 Score=55.59 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=55.9
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
.++|+|||.|.||..+|..++ .-|. +|..+|...+ ......+.. . . ... ......++ +.+++||+|++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~-~~g~~~ev~L~Di~~~-~~g~a~dl~-~-~---~~~--~i~~t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAIS-AKGIADRLVLLDLSEG-TKGATMDLE-I-F---NLP--NVEISKDL-SASAHSKVVIF 83 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECCC------CHHHHH-H-H---TCT--TEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCCCEEEEEcCCcc-hHHHHHHHh-h-h---cCC--CeEEeCCH-HHHCCCCEEEE
Confidence 378999999999999998765 3345 9999999864 211111110 0 0 111 12223466 56899999999
Q ss_pred cCCCCc----------ccccccCH--HHHhcCCCCcEEEEcCC
Q 019387 243 HPVLDK----------TTYHLINK--ERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~~pl~~----------~t~~li~~--~~l~~mk~ga~lINvaR 273 (342)
+..... +|..++-+ ..+....|.+++++++-
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 973311 11111111 12233347899999876
No 348
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.73 E-value=0.019 Score=52.87 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=58.5
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|+|+| +|+||+.+++.+.+.=++++.+ +|+..+..... ..+.+ .+..+.++....++++++.++|+|+-.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~---d~gel---~G~~~~gv~v~~dl~~ll~~aDVvIDF 95 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDK---DASIL---IGSDFLGVRITDDPESAFSNTEGILDF 95 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTS---BGGGG---TTCSCCSCBCBSCHHHHTTSCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---chHHh---hccCcCCceeeCCHHHHhcCCCEEEEc
Confidence 4899999 9999999999875456888764 68764321000 00000 111223444567999999999999877
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
.+ |+.. .+..-..++.|.-+|-...|
T Consensus 96 T~--p~a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 96 SQ--PQAS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SC--HHHH---HHHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHH---HHHHHHHHHcCCCEEEECCC
Confidence 64 3211 11122234456666665566
No 349
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.70 E-value=0.015 Score=53.68 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=32.0
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~ 199 (342)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence 4689999999999999999999986 5565 788888654
No 350
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.69 E-value=0.017 Score=54.12 Aligned_cols=93 Identities=22% Similarity=0.192 Sum_probs=60.5
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh----h--c
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--E 236 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll----~--~ 236 (342)
.|++|.|.|. |.||..+++.+ +.+|++|++.+++.+.... ...+ +.... +....++.+.+ . .
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~~-------ga~~v-~~~~~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIA-KGMGAKVIAVVNRTAATEF--VKSV-------GADIV-LPLEEGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSGGGHHH--HHHH-------TCSEE-EESSTTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHhc-------CCcEE-ecCchhHHHHHHHHhCCCC
Confidence 5889999998 99999999985 8999999999987654311 1111 11111 11112333322 2 4
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.|.... .-...+..+++|..++.++.
T Consensus 228 ~Dvvid~~g~~------~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 228 VDMVVDPIGGP------AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEEEESCC--------CHHHHHHTEEEEEEEEEC--
T ss_pred ceEEEECCchh------HHHHHHHhhcCCCEEEEEEc
Confidence 89999888642 23567888999999999873
No 351
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.68 E-value=0.028 Score=52.43 Aligned_cols=121 Identities=15% Similarity=0.188 Sum_probs=64.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccC--CCCccccccCCHHHHhhcCCEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANG--EQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
.+|+|+|.|.+|.++|..|+ ..|. +|..+|...+. .+..... +.... ..+..+.. .+ .+.+++||+|+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~-~~~~~~ev~L~Di~~~~-~~g~~~d----l~~~~~~~~~~~i~~-~~-~~a~~~aDvVi 79 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMA-LRQTANELVLIDVFKEK-AIGEAMD----INHGLPFMGQMSLYA-GD-YSDVKDCDVIV 79 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCSSEEEEECCC----CCHHHHH----HTTSCCCTTCEEEC---C-GGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChHH-HHHHHHH----HHHhHHhcCCeEEEE-CC-HHHhCCCCEEE
Confidence 58999999999999998875 4455 99999987532 1111111 11100 01111211 23 45689999999
Q ss_pred EcCCCCcccccc------------cC--HHHHhcCCCCcEEEEcCCCcccCHHH--HHHH--HHcCCceEE--EEe
Q 019387 242 LHPVLDKTTYHL------------IN--KERLATMKKEAILVNCSRGPVIDEVA--LVEH--LKQNPMFRV--GLD 297 (342)
Q Consensus 242 l~~pl~~~t~~l------------i~--~~~l~~mk~ga~lINvaRG~~vd~~a--L~~a--L~~g~i~~a--aLD 297 (342)
++.+. +...+. +- .+.+....|++.+++++ ..+|.-. +.+. +...++.|. .||
T Consensus 80 i~~g~-p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 80 VTAGA-NRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS--NPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp ECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS--SSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred EcCCC-CCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 99875 332222 10 12233336899999974 4444433 3332 223366665 356
No 352
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.65 E-value=0.019 Score=53.95 Aligned_cols=69 Identities=16% Similarity=0.247 Sum_probs=45.9
Q ss_pred CeEEEEecCHHHH-HHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEE
Q 019387 166 QTVGVIGAGRIGS-AYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (342)
Q Consensus 166 ktvgIvG~G~IG~-~vA~~l~~af-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV 240 (342)
.+|||||+|.||+ ..++.+ +.. +++|. ++|+.... .+.+.++ . .+...+.++++++.. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~---~~a~~~~-------~--~~~~~~~~~~~ll~~~~~D~V 69 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYV-MIRETLEVKTIFDLHVNE---KAAAPFK-------E--KGVNFTADLNELLTDPEIELI 69 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECTTCCH---HHHHHHH-------T--TTCEEESCTHHHHSCTTCCEE
T ss_pred eEEEEEccCHHHHHHHHHHH-hhCCCeEEEEEECCCHHH---HHHHhhC-------C--CCCeEECCHHHHhcCCCCCEE
Confidence 3799999999999 567766 444 78876 67876222 2111110 0 012345799999986 8999
Q ss_pred EEcCCCC
Q 019387 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~~pl~ 247 (342)
++|+|..
T Consensus 70 ~i~tp~~ 76 (349)
T 3i23_A 70 TICTPAH 76 (349)
T ss_dssp EECSCGG
T ss_pred EEeCCcH
Confidence 9999953
No 353
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.64 E-value=0.015 Score=55.05 Aligned_cols=95 Identities=9% Similarity=0.031 Sum_probs=61.0
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----cC
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~a 237 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.+++++.... ...+ +....-.....++.+.+. ..
T Consensus 190 ~g~~VlV~GaG~vG~~a~ql-ak~~Ga~~Vi~~~~~~~~~~~--a~~l-------Ga~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLA-AKVCGASIIIAVDIVESRLEL--AKQL-------GATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHH-HHHHTCSEEEEEESCHHHHHH--HHHH-------TCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEECCCHHHHHH--HHHc-------CCCEEecCCccCHHHHHHHhcCCCC
Confidence 48899999999999999998 588999 79999887654211 1111 111110001123333222 47
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+|+.+... +++ -...++.+++|..++.++-
T Consensus 260 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 260 NFALESTGS-PEI----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEEECSCC-HHH----HHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCC-HHH----HHHHHHHHhcCCEEEEeCC
Confidence 999988863 111 2456888999999999874
No 354
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.64 E-value=0.022 Score=55.82 Aligned_cols=127 Identities=15% Similarity=0.184 Sum_probs=73.9
Q ss_pred CeEEEEecCHH-HHHHHHHHHh---cC-CcEEEEEcCCc--hhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCC
Q 019387 166 QTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 166 ktvgIvG~G~I-G~~vA~~l~~---af-g~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aD 238 (342)
.+|+|||.|.. |..++..|++ .+ +-+|..||+.+ +. .+...+ ....+......+..+....++.+.+++||
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~-~~~~~~-~~~~~~~~~~~~~~i~~t~D~~eal~gAD 85 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEK-LEIVGA-LAKRMVEKAGVPIEIHLTLDRRRALDGAD 85 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHH-HHHHHH-HHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHH-HHHHHH-HHHHHHhhcCCCcEEEEeCCHHHHhCCCC
Confidence 48999999999 8887665543 45 56899999977 43 222111 11111111112333444468888999999
Q ss_pred EEEEcCCCCcc-----------ccccc--------------------C--HHHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 019387 239 VISLHPVLDKT-----------TYHLI--------------------N--KERLATMKKEAILVNCSRGPVIDEVALVEH 285 (342)
Q Consensus 239 iV~l~~pl~~~-----------t~~li--------------------~--~~~l~~mk~ga~lINvaRG~~vd~~aL~~a 285 (342)
+|+++.|.... ..+++ - .+.+....|++++||++-.--+-..++.+.
T Consensus 86 ~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~ 165 (450)
T 1s6y_A 86 FVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRY 165 (450)
T ss_dssp EEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHH
T ss_pred EEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Confidence 99999985321 11111 0 133444568999999987654444555444
Q ss_pred HHcCCceEE
Q 019387 286 LKQNPMFRV 294 (342)
Q Consensus 286 L~~g~i~~a 294 (342)
....++.|.
T Consensus 166 ~p~~rViG~ 174 (450)
T 1s6y_A 166 TKQEKVVGL 174 (450)
T ss_dssp CCCCCEEEC
T ss_pred CCCCCEEEe
Confidence 322245544
No 355
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.62 E-value=0.027 Score=54.00 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=48.8
Q ss_pred CeEEEEecCH---HHHHHHHHHHhcCCcEEE--EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc----
Q 019387 166 QTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---- 236 (342)
Q Consensus 166 ktvgIvG~G~---IG~~vA~~l~~afg~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---- 236 (342)
.+|||||+|. ||+.-+..+...-++++. ++|+.++.. +.+.+.+ +... ...+.++++++..
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~~ 82 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAFGEQL-------GVDS--ERCYADYLSMFEQEARR 82 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHHHHHT-------TCCG--GGBCSSHHHHHHHHTTC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHHHHHh-------CCCc--ceeeCCHHHHHhccccc
Confidence 5899999999 999988876333347876 468877532 2222222 2110 1245799999976
Q ss_pred ---CCEEEEcCCCC
Q 019387 237 ---ADVISLHPVLD 247 (342)
Q Consensus 237 ---aDiV~l~~pl~ 247 (342)
.|+|++|+|..
T Consensus 83 ~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 83 ADGIQAVSIATPNG 96 (398)
T ss_dssp TTCCSEEEEESCGG
T ss_pred CCCCCEEEECCCcH
Confidence 89999999954
No 356
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.62 E-value=1 Score=41.96 Aligned_cols=137 Identities=11% Similarity=0.047 Sum_probs=87.3
Q ss_pred HHhCCeeEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCeEEE-----EecCHHHHH
Q 019387 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV-----IGAGRIGSA 179 (342)
Q Consensus 105 ~~~~gI~V~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~L~gktvgI-----vG~G~IG~~ 179 (342)
++-.+|+|.|..+....++- +++=++.+.++. | + ..+. .+|++ +|=+++.++
T Consensus 131 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~---------g----~-------~~l~-l~ia~a~~~~vGD~rva~S 187 (324)
T 1js1_X 131 IQHSGRPVFSMEAATRHPLQ--SFADLITIEEYK---------K----T-------ARPK-VVMTWAPHPRPLPQAVPNS 187 (324)
T ss_dssp HHHSSSCEEESSCSSCCHHH--HHHHHHHHHHHC---------S----S-------SSCE-EEEECCCCSSCCCSHHHHH
T ss_pred HhhCCCCEEECCCCCCCcHH--HHHHHHHHHHHc---------C----C-------CCee-EEEEEEcccccCCcchHHH
Confidence 44557999997775444432 222223332210 1 0 1356 89999 999999999
Q ss_pred HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCCC--Cc---------
Q 019387 180 YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL--DK--------- 248 (342)
Q Consensus 180 vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~pl--~~--------- 248 (342)
.+..+ ..||++|.+..|..-...+... ..+....+++++++++|+|..-.-. ..
T Consensus 188 l~~~~-~~~G~~v~~~~P~~~~~~~~~~--------------~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r 252 (324)
T 1js1_X 188 FAEWM-NATDYEFVITHPEGYELDPKFV--------------GNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILST 252 (324)
T ss_dssp HHHHH-HTSSSEEEEECCTTCCCCHHHH--------------TTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCC
T ss_pred HHHHH-HHCCCEEEEeCCcccCCChhhc--------------cceEEECCHHHHhCCCCEEEecCcccCCCccccchHHH
Confidence 99997 6899999998875421111100 0223457899999999999773321 11
Q ss_pred ccccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 249 TTYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
....-++.+.++.+| +++|.-+. ||.=|+.+
T Consensus 253 ~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~e 286 (324)
T 1js1_X 253 DRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTDD 286 (324)
T ss_dssp CTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCHH
T ss_pred hcCcccCHHHHHhcC-CcEEECCCCCCCCcccCHH
Confidence 123567889999998 88888875 67666655
No 357
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.62 E-value=0.023 Score=53.54 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=23.4
Q ss_pred eEEEEecCHHHHHHHHHHHhc--CCcEEEEEc
Q 019387 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a--fg~~V~~~d 196 (342)
+|||+|+|.||+.+.|.|... =.++|.+.+
T Consensus 3 kVgInG~G~IGr~llR~l~~~~~p~~eivaIn 34 (337)
T 1rm4_O 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVIN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 799999999999999987432 256776544
No 358
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.60 E-value=0.034 Score=52.09 Aligned_cols=68 Identities=16% Similarity=0.254 Sum_probs=48.3
Q ss_pred CeEEEEecC-HHHHHHHHHHHhcC--CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCE
Q 019387 166 QTVGVIGAG-RIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 166 ktvgIvG~G-~IG~~vA~~l~~af--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDi 239 (342)
.+|||||+| .+|+..++.+ +.. ++++. ++|++++. .+.+.+.| +. ...+.++++++. +.|+
T Consensus 19 irvgiIG~G~~~g~~~~~~l-~~~~~~~~lvav~d~~~~~-~~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPAL-KNLSHLFEITAVTSRTRSH-AEEFAKMV-------GN----PAVFDSYEELLESGLVDA 85 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTTTTTEEEEEEECSSHHH-HHHHHHHH-------SS----CEEESCHHHHHHSSCCSE
T ss_pred eeEEEEecCHHHHHHHHHHH-HhCCCceEEEEEEcCCHHH-HHHHHHHh-------CC----CcccCCHHHHhcCCCCCE
Confidence 489999999 8999999887 454 67775 68887653 33332222 11 123578999996 5899
Q ss_pred EEEcCCC
Q 019387 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~~pl 246 (342)
|++|+|.
T Consensus 86 V~i~tp~ 92 (340)
T 1zh8_A 86 VDLTLPV 92 (340)
T ss_dssp EEECCCG
T ss_pred EEEeCCc
Confidence 9999984
No 359
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.60 E-value=0.021 Score=53.01 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=69.8
Q ss_pred cccCCCeEEEE-ec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--
Q 019387 161 NLLKGQTVGVI-GA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (342)
Q Consensus 161 ~~L~gktvgIv-G~-G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-- 235 (342)
..+..+++.|| |+ |+.|+.+++.| +..|.+++ ..+|.... ..-.+...+.+++++..
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l-~~~G~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~ 70 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQA-LEYGTNLVGGTTPGKGG-----------------KTHLGLPVFNTVKEAKEQT 70 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHH-HHCCCcEEEEeCCCcCc-----------------ceECCeeeechHHHhhhcC
Confidence 45667889999 99 99999999997 67888844 45654311 00123344578999988
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCCCccc-CHHHHHHHHHcC-Cce
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSRGPVI-DEVALVEHLKQN-PMF 292 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaRG~~v-d~~aL~~aL~~g-~i~ 292 (342)
..|++++++|. +.....+.+ .++ .| ..+|+.+-|-.. ++..+.+..++. .+.
T Consensus 71 ~vD~avI~vP~-~~~~~~~~e-~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 71 GATASVIYVPP-PFAAAAINE-AID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp CCCEEEECCCH-HHHHHHHHH-HHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred CCCEEEEecCH-HHHHHHHHH-HHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 89999999993 222333332 222 23 244667666432 334788888776 554
No 360
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.59 E-value=0.015 Score=50.35 Aligned_cols=101 Identities=11% Similarity=0.214 Sum_probs=61.5
Q ss_pred CCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC--ccccccCCHHHHhhcCCEEE
Q 019387 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ll~~aDiV~ 241 (342)
.|+|.|.| -|.||+.+++.|++.-|.+|.+.+++++...+.... ...+... .......+++++++++|+|+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII------DHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc------CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 36799999 699999999998536799999999886512111100 0000000 01112346678889999999
Q ss_pred EcCCCCcccccccCHHHHhcCCC-C-cEEEEcCCCc
Q 019387 242 LHPVLDKTTYHLINKERLATMKK-E-AILVNCSRGP 275 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~-g-a~lINvaRG~ 275 (342)
.+.....- . ....+..|++ | ..||+++-..
T Consensus 79 ~~ag~~n~--~--~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 79 VGAMESGS--D--MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp ESCCCCHH--H--HHHHHHHHHHTTCCEEEEEEETT
T ss_pred EcCCCCCh--h--HHHHHHHHHhcCCCeEEEEeece
Confidence 98864311 1 4555555642 2 3688876443
No 361
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.58 E-value=0.024 Score=52.84 Aligned_cols=69 Identities=14% Similarity=0.186 Sum_probs=47.5
Q ss_pred CeEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEE
Q 019387 166 QTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~-~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~ 241 (342)
.+|||||+|.+|. .+++.+ +.-++++. ++|++++.. +.+.+.| + ....+.++++++. +.|+|+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l-~~~~~~lvav~d~~~~~~-~~~a~~~-------~----~~~~~~~~~~ll~~~~~D~V~ 71 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQL-IDAGAELAGVFESDSDNR-AKFTSLF-------P----SVPFAASAEQLITDASIDLIA 71 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHH-HHTTCEEEEEECSCTTSC-HHHHHHS-------T----TCCBCSCHHHHHTCTTCCEEE
T ss_pred cEEEEECCChHHHHHhhhhh-cCCCcEEEEEeCCCHHHH-HHHHHhc-------C----CCcccCCHHHHhhCCCCCEEE
Confidence 4899999999996 677766 44588865 788876532 2222221 1 1123578999997 689999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+|+|..
T Consensus 72 i~tp~~ 77 (336)
T 2p2s_A 72 CAVIPC 77 (336)
T ss_dssp ECSCGG
T ss_pred EeCChh
Confidence 999953
No 362
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.56 E-value=0.024 Score=55.99 Aligned_cols=98 Identities=15% Similarity=0.248 Sum_probs=68.0
Q ss_pred cccCCCeEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCH
Q 019387 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 161 ~~L~gktvgIvG~G----------~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
..+.|++|+|+|+- .=...+++.| ...|++|.+|||..... .. .....++
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L-~~~g~~V~~~DP~~~~~-----------------~~--~~~~~~~ 408 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLC-LKAGASVMVHDPYVVNY-----------------PG--VEISDNL 408 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHH-HHHTCEEEEECSSCCCB-----------------TT--BCEESCH
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHH-HHCCCEEEEECCCcccc-----------------cC--cceecCH
Confidence 36899999999974 2357888887 68899999999986410 00 1124688
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHH-HHhcCC-CCcEEEEcCCCcccCHHHH
Q 019387 231 DEVLREADVISLHPVLDKTTYHLINKE-RLATMK-KEAILVNCSRGPVIDEVAL 282 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t~~li~~~-~l~~mk-~ga~lINvaRG~~vd~~aL 282 (342)
++.++++|.|+++++= ++-+. ++.+ ..+.|+ ++.+++|+ |+ ++|.+.+
T Consensus 409 ~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 409 EEVVRNADAIVVLAGH-SAYSS-LKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp HHHHTTCSEEEECSCC-HHHHS-CCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred HHHHhcCCEEEEecCC-HHHHh-hhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 9999999999999862 33332 3433 445677 47899995 65 4565554
No 363
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.54 E-value=0.021 Score=53.54 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=58.3
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh----h--c
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--E 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll----~--~ 236 (342)
.|++|.|+|.|.||...++. ++..|+ +|++.+++++.. + +...+ +....-.....++.+.+ . .
T Consensus 166 ~g~~VlV~GaG~vG~~a~ql-a~~~Ga~~Vi~~~~~~~~~-~-~~~~l-------Ga~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAG-ANHLGAGRIFAVGSRKHCC-D-IALEY-------GATDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHH-HHTTTCSSEEEECCCHHHH-H-HHHHH-------TCCEEECGGGSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCcEEEEECCCHHHH-H-HHHHh-------CCceEEcCCCcCHHHHHHHHcCCCC
Confidence 48899999999999999998 589999 899999876532 1 11111 11111000112333222 1 4
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
.|+|+.+....+ .-...++.+++|..++.++
T Consensus 236 ~D~v~d~~g~~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 236 VDKVVIAGGDVH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEEECSSCTT-----HHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCChH-----HHHHHHHHHhcCCEEEEec
Confidence 789988876421 1245567777777777765
No 364
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.50 E-value=0.025 Score=52.98 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=62.3
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC-ccccccCCHHHHhh-----c
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~-----~ 236 (342)
.|++|.|+|. |.||+.+++.+ +..|++|++.+++++.. +. ...+ +... .......++.+.+. .
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~V~~~~~~~~~~-~~-~~~~-------g~~~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYA-KAMGYRVLGIDGGEGKE-EL-FRSI-------GGEVFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECSTTHH-HH-HHHT-------TCCEEEETTTCSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCcEEEEcCCHHHH-HH-HHHc-------CCceEEecCccHhHHHHHHHHhCCC
Confidence 4789999999 89999999985 78999999999876543 11 1111 1110 01111234544443 4
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.+....+ .-...+..|+++..+|+++.
T Consensus 239 ~D~vi~~~g~~~-----~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 239 AHGVINVSVSEA-----AIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEEECSSCHH-----HHHHHTTSEEEEEEEEECCC
T ss_pred CCEEEECCCcHH-----HHHHHHHHHhcCCEEEEEeC
Confidence 799998876311 12456788899999999874
No 365
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.50 E-value=0.035 Score=52.66 Aligned_cols=95 Identities=18% Similarity=0.147 Sum_probs=61.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh-----
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~----- 235 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.++++++.. +...+ +.... .... ..++.+.+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~-a~~~Ga~~Vi~~~~~~~~~~--~a~~l-------Ga~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEG-AKTAGASRIIGIDIDSKKYE--TAKKF-------GVNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHH-HHHHTCSCEEEECSCTTHHH--HHHTT-------TCCEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEcCCHHHHH--HHHHc-------CCcEEEccccCchhHHHHHHHhcCC
Confidence 58899999999999999998 589999 8999998775431 11111 21111 1110 134444333
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCC-cEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~g-a~lINvaR 273 (342)
..|+|+-|... ++ .-...++.+++| ..++.++-
T Consensus 263 g~D~vid~~g~-~~----~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 263 GVDYSFECIGN-VS----VMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CBSEEEECSCC-HH----HHHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCC-HH----HHHHHHHHhhccCCEEEEEcc
Confidence 48999998863 11 124567889986 88888874
No 366
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.46 E-value=0.12 Score=50.19 Aligned_cols=117 Identities=17% Similarity=0.201 Sum_probs=66.6
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCc--------------hhHHHHHHhhhhhhhhccCCCCcccc
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQ--------------ATRLEKFVTAYGQFLKANGEQPVTWK 225 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (342)
.++.|++|.|.|+|++|+.+|+.| ...|++|++ .|.++ ...+....+..+.+ .+... ..
T Consensus 208 ~~l~g~~vaVqG~GnVG~~~a~~L-~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i---~~~~~--a~ 281 (421)
T 2yfq_A 208 IKMEDAKIAVQGFGNVGTFTVKNI-ERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTL---IGFPG--AE 281 (421)
T ss_dssp CCGGGSCEEEECCSHHHHHHHHHH-HHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCc---ccCCC--ce
Confidence 468899999999999999999997 689999994 55551 01122221111100 00000 00
Q ss_pred ccCCHHHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 226 RASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 226 ~~~~l~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
. .+-++++ ..||+++-|.+ .+.|+.+....++ ..+++-.+-+++- .+ -.+.|++..+.
T Consensus 282 ~-i~~~~~~~~~~DIliP~A~-----~n~i~~~~A~~l~-ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 282 R-ITDEEFWTKEYDIIVPAAL-----ENVITGERAKTIN-AKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------------CEEECSC-----SSCSCHHHHTTCC-CSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred E-eCccchhcCCccEEEEcCC-----cCcCCcccHHHcC-CeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 1 1122332 36999998864 4678888888884 6788888999864 33 33555554444
No 367
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.43 E-value=0.019 Score=54.09 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=62.2
Q ss_pred CCCeEEEE-ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----cC
Q 019387 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvgIv-G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~a 237 (342)
.|++|.|. |.|.||..+++.+ +..|++|++.+++++..... ..+ +....-.....++.+.+. ..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~~--~~l-------Ga~~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLA-RAFGAEVYATAGSTGKCEAC--ERL-------GAKRGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHHH--HHH-------TCSEEEETTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHHH--Hhc-------CCCEEEeCCchHHHHHHHHHhCCCc
Confidence 58899999 6899999999985 89999999999877543211 111 111110001123333332 48
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+++.|.... .-...+..++++..++.++-
T Consensus 237 Dvvid~~g~~------~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 237 DIILDMIGAA------YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEESCCGG------GHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCCHH------HHHHHHHHhccCCEEEEEEe
Confidence 9999888631 23567888999999999873
No 368
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.43 E-value=0.026 Score=53.11 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=44.5
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHh----hhhhhhhcc-CCCCccccccCCHHHHhhcCCEE
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVT----AYGQFLKAN-GEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~l~~ll~~aDiV 240 (342)
+|||+|+|.||+.+++.|.+.-++++.+ .|+.+......... .|+.+.... ...........+.++++.++|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 7999999999999999875435788865 45543221111000 000000000 00000000112567788899999
Q ss_pred EEcCCCC
Q 019387 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~~pl~ 247 (342)
+.|+|..
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999853
No 369
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.43 E-value=0.024 Score=55.37 Aligned_cols=118 Identities=18% Similarity=0.132 Sum_probs=71.5
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh--HHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc-CC
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE-AD 238 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-aD 238 (342)
++.||+|.|||+|..|.++|+.| ...|.+|.++|..... ..... +...+.. +..-...++++.+ +|
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l-~~~G~~V~~~D~~~~~~~~~~~~-------L~~~gi~---~~~g~~~~~~~~~~~d 74 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLL-AKLGAIVTVNDGKPFDENPTAQS-------LLEEGIK---VVCGSHPLELLDEDFC 74 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHH-HHTTCEEEEEESSCGGGCHHHHH-------HHHTTCE---EEESCCCGGGGGSCEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEeCCcccCChHHHH-------HHhCCCE---EEECCChHHhhcCCCC
Confidence 46799999999999999999997 6899999999986531 11111 1111211 1111122345566 89
Q ss_pred EEEEcCCCCccc----------ccccCHH-HHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 019387 239 VISLHPVLDKTT----------YHLINKE-RLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 239 iV~l~~pl~~~t----------~~li~~~-~l~~-mk~ga~lINvaRG~~vd~~aL~~aL~~g~ 290 (342)
+|+...-..+++ ..++++. .+.. ++...+-|-=+.|..-...-+...|+...
T Consensus 75 ~vv~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 75 YMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp EEEECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred EEEECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 998864332221 1244443 3333 34344555557888887777777776543
No 370
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.42 E-value=0.024 Score=52.54 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=47.1
Q ss_pred CeEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh---------
Q 019387 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (342)
Q Consensus 166 ktvgIvG~-G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll--------- 234 (342)
.++||||+ |.||+..++.+ +..+.++. ++|++++.. ...+.+ .....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-----------~~~~~~~~~~~ll~~~~~l~~~ 69 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAI-KEVGGVLVASLDPATNVG--LVDSFF-----------PEAEFFTEPEAFEAYLEDLRDR 69 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-----------TTCEEESCHHHHHHHHHHHHHT
T ss_pred eEEEEECCChHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-----------CCCceeCCHHHHHHHhhhhccc
Confidence 58999999 68999999987 56688866 578876531 100000 1123457888887
Q ss_pred -hcCCEEEEcCCC
Q 019387 235 -READVISLHPVL 246 (342)
Q Consensus 235 -~~aDiV~l~~pl 246 (342)
.+.|+|++|+|.
T Consensus 70 ~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 70 GEGVDYLSIASPN 82 (312)
T ss_dssp TCCCSEEEECSCG
T ss_pred CCCCcEEEECCCc
Confidence 578999999994
No 371
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.41 E-value=0.022 Score=52.99 Aligned_cols=97 Identities=19% Similarity=0.119 Sum_probs=62.6
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----cC
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~a 237 (342)
.|++|.|.|. |.||+.+++.+ +..|++|++.+++++.. +.....+ +....-.....++.+.+. ..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIA-RLKGCRVVGIAGGAEKC-RFLVEEL-------GFDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHHHHTT-------CCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHHc-------CCCEEEECCCHHHHHHHHHhcCCCc
Confidence 4889999999 99999999985 79999999999876542 2110111 111100001123333332 47
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
|+|+.|... + .-...+..++++..+|.++-..
T Consensus 220 d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 220 DVFFDNVGG--E----ILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp EEEEESSCH--H----HHHHHHTTEEEEEEEEECCCGG
T ss_pred eEEEECCCc--c----hHHHHHHHHhhCCEEEEEeecc
Confidence 999888752 1 2356778899999999987543
No 372
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.40 E-value=0.037 Score=51.80 Aligned_cols=107 Identities=19% Similarity=0.206 Sum_probs=59.7
Q ss_pred CCeEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~-afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
..+|+|+|.|.+|.+++..|+. .+.-++..+|...+. .+.......... ... .+..+. .+..+.+++||+|+++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~-~~g~~~dl~~~~-~~~-~~~~i~--~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDK-TKGDAIDLSNAL-PFT-SPKKIY--SAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHH-HHHHHHHHHTTG-GGS-CCCEEE--ECCGGGGGGCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchH-hHHHHHHHHHHH-Hhc-CCeEEE--ECCHHHhCCCCEEEEc
Confidence 3689999999999999987642 333489999997543 222111110000 000 111121 1335668999999999
Q ss_pred CCCCcccccc-------cCH-------HHHhcCCCCcEEEEcCCCcccCH
Q 019387 244 PVLDKTTYHL-------INK-------ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 244 ~pl~~~t~~l-------i~~-------~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
.+.. ...+. .|. +.+....|++.++++ ...+|.
T Consensus 84 ag~~-~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~ 130 (326)
T 2zqz_A 84 AGAP-QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDI 130 (326)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHH
T ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHH
Confidence 8653 32222 111 222333688999998 445544
No 373
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.39 E-value=0.01 Score=54.40 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=35.8
Q ss_pred ccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
...+.|++|.|||.|.+|...++.| ...|++|+++++...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~L-l~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKL-MPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHH-GGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHH-HhCCCEEEEEcCCCC
Confidence 3568999999999999999999998 689999999998764
No 374
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.39 E-value=0.033 Score=52.61 Aligned_cols=113 Identities=21% Similarity=0.281 Sum_probs=63.4
Q ss_pred cCCCeEEEEec-CHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 163 LKGQTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 163 L~gktvgIvG~-G~IG~~vA~~l~~afg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
+.+++|+|+|. |.+|+.+|..++ .+| -+|..+|..... .+..... +..............+..+.+++||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~-~~g~~~evvLiDi~~~k-~~g~a~D----L~~~~~~~~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAA-MMRLTPNLCLYDPFAVG-LEGVAEE----IRHCGFEGLNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHH-HTTCCSCEEEECSCHHH-HHHHHHH----HHHHCCTTCCCEEESCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-hcCCCCEEEEEeCCchh-HHHHHHh----hhhCcCCCCceEEcCCHHHHhCCCCE
Confidence 34679999998 999999997763 455 489999987542 1211000 11000011122233578888999999
Q ss_pred EEEcCCCCcccccc-----c--CH-------HHHhcCCCCc-EEEEcCCCcccCHHHHHH
Q 019387 240 ISLHPVLDKTTYHL-----I--NK-------ERLATMKKEA-ILVNCSRGPVIDEVALVE 284 (342)
Q Consensus 240 V~l~~pl~~~t~~l-----i--~~-------~~l~~mk~ga-~lINvaRG~~vd~~aL~~ 284 (342)
|+++... ++..+. + |. +.+..-.|++ ++++++ ..+|.-..+-
T Consensus 80 VvitaG~-p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs--NPvd~~t~i~ 136 (343)
T 3fi9_A 80 IVSSGGA-PRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF--NPADITGLVT 136 (343)
T ss_dssp EEECCC--------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS--SSHHHHHHHH
T ss_pred EEEccCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec--CchHHHHHHH
Confidence 9998642 332222 1 11 1233334677 488886 5566554443
No 375
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.38 E-value=0.031 Score=53.33 Aligned_cols=100 Identities=20% Similarity=0.125 Sum_probs=61.4
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHH----Hhh--c
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR--E 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----ll~--~ 236 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.++++++. +. ...+ +.........+++.+ +.. .
T Consensus 185 ~g~~VlV~GaG~vG~~aiql-Ak~~Ga~~Vi~~~~~~~~~-~~-a~~l-------Ga~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAAS-ARLLGAAVVIVGDLNPARL-AH-AKAQ-------GFEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEEESCHHHH-HH-HHHT-------TCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECCcHHHHHHHHH-HHHCCCCeEEEEcCCHHHH-HH-HHHc-------CCcEEccCCcchHHHHHHHHhCCCC
Confidence 48899999999999999998 589999 799998876542 11 1111 211111111122332 222 4
Q ss_pred CCEEEEcCCCCcccc----------cccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTY----------HLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~----------~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+-++....... .-.-...++.+++|..++.++-
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 799999886431000 0012456788899988888763
No 376
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.38 E-value=0.021 Score=53.13 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=60.5
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------hc
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~~ 236 (342)
.|++|.|+| .|.||..+++.+ +..|++|++.++++++. + +...+ +....-.....++.+.+ ..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~-~~~~~-------ga~~~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVASTDEKL-K-IAKEY-------GAEYLINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSHHHH-H-HHHHT-------TCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-H-HHHHc-------CCcEEEeCCCchHHHHHHHHhCCCC
Confidence 588999999 899999999985 89999999999876543 2 11111 11111000112333222 24
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.|... + .-...++.+++|..+|.++.
T Consensus 218 ~D~vid~~g~--~----~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 218 VDASFDSVGK--D----TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEEEECCGG--G----GHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhccCCEEEEEcC
Confidence 7899888763 1 23456788888888888864
No 377
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.36 E-value=0.33 Score=46.91 Aligned_cols=114 Identities=18% Similarity=0.161 Sum_probs=70.8
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC---------chhHHHHHHhhhhhhhhccCCCCccccccCCH
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
.++.|++|.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+....+..+. ...... ...++
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L-~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~------v~~~~~-~~~e~ 285 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHA-ERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGS------LPRLDL-APEEV 285 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSS------CSCCCB-CTTTG
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCC------cceeec-cchhh
Confidence 468999999999999999999997 57899999 45552 11122222111110 000000 01122
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 231 ~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
+-..||+++-|.. .+.|+.+.-..++- .+++.-+-+++- .+| .+.|.+..|.
T Consensus 286 --~~~~~DVliP~A~-----~n~i~~~~A~~l~a-k~V~EgAN~p~t-~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 286 --FGLEAEVLVLAAR-----EGALDGDRARQVQA-QAVVEVANFGLN-PEA-EAYLLGKGAL 337 (419)
T ss_dssp --GGSSCSEEEECSC-----TTCBCHHHHTTCCC-SEEEECSTTCBC-HHH-HHHHHHHTCE
T ss_pred --hccCceEEEeccc-----ccccccchHhhCCc-eEEEECCCCcCC-HHH-HHHHHHCCCE
Confidence 2247999998854 46777887777754 488999988864 444 3556555554
No 378
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.32 E-value=0.021 Score=53.75 Aligned_cols=45 Identities=24% Similarity=0.352 Sum_probs=33.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhh
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYG 211 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~~~~~~~~~~~~~ 211 (342)
-+|||.|||+||+.++|.+ ..+|++|++ +|+......-.+.-.|+
T Consensus 8 ~kvgInGFGRIGrlv~R~~-~~~~veivainDp~~d~~~~a~l~~yD 53 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRAC-MEKGVKVVAVNDPFIDPEYMVYMFKYD 53 (346)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEECTTCCHHHHHHHHHCC
T ss_pred eEEEEECCChHHHHHHHHH-HhCCCEEEEEeCCCCChhHhccccccc
Confidence 4899999999999999985 688999887 67765443334444444
No 379
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.31 E-value=0.091 Score=51.30 Aligned_cols=89 Identities=17% Similarity=0.222 Sum_probs=60.5
Q ss_pred ccCCCeEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHH
Q 019387 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (342)
Q Consensus 162 ~L~gktvgIvG~G----------~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (342)
.+.|++|+|+|+. .=...+++.| +..|++|.+|||......... ++ .......+++
T Consensus 330 ~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L-~~~Ga~V~~~DP~~~~~~~~~---~~----------~~~~~~~~~~ 395 (444)
T 3vtf_A 330 GLRGRHVGVLGLAFKPNTDDVRESRGVEVARLL-LERGARVYVHDPMAMEKARAV---LG----------DSVTYVEDPQ 395 (444)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECSSTHHHHHHH---HG----------GGSEECSCHH
T ss_pred ccCCCEEEEEeeecCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChHHHHh---cC----------CCceecCCHH
Confidence 5889999999985 2267888987 689999999999864322111 10 1123456899
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 232 ~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
++++++|.|+++.+= ++-+.+ + + ++.+++++ |+
T Consensus 396 ~a~~~aDavvi~t~h-~ef~~l-d------~-~~~vv~D~-Rn 428 (444)
T 3vtf_A 396 ALLDQVEGVIIATAW-PQYEGL-D------Y-RGKVVVDG-RY 428 (444)
T ss_dssp HHHHHCSEEEECSCC-GGGGGS-C------C-TTCEEEES-SC
T ss_pred HHHhCCCEEEEccCC-HHHhCC-C------c-CCCEEEEC-CC
Confidence 999999999999763 222211 1 2 36788885 54
No 380
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.30 E-value=0.021 Score=52.95 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=61.4
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------hc
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~~ 236 (342)
.|++|.|.| .|.||..+++.+ +..|++|++.++++++.. . ...+ +....-.....++.+.+ ..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~-~-~~~~-------Ga~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWA-KALGAKLIGTVSSPEKAA-H-AKAL-------GAWETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSHHHHH-H-HHHH-------TCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-H-HHHc-------CCCEEEeCCCccHHHHHHHHhCCCC
Confidence 488999999 899999999985 889999999998765431 1 1111 11110000112333222 25
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.|... + .-...++.+++|..+|.++.
T Consensus 210 ~Dvvid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 210 CPVVYDGVGQ--D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEEEESSCG--G----GHHHHHTTEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhcCCCEEEEEec
Confidence 8999988763 1 23467888999999999874
No 381
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.29 E-value=0.018 Score=55.70 Aligned_cols=39 Identities=21% Similarity=0.452 Sum_probs=34.7
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~ 201 (342)
-+.|++|+|+|-|.+|+.+++.+ +.+|.+|+++|+++..
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa-~~lG~~v~v~d~~~~~ 70 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAA-QSMGYRVAVLDPDPAS 70 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCcC
Confidence 46799999999999999999995 8999999999987653
No 382
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.29 E-value=0.068 Score=49.59 Aligned_cols=106 Identities=18% Similarity=0.282 Sum_probs=59.4
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|+|+|.|.||..+|..++. -|. +|..+|...+.. +.............. ....+....+. +.+++||+|+++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIARTPGKP-QGEALDLAHAAAELG-VDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCChhhH-HHHHHHHHHhhhhcC-CCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 58999999999999987653 244 799999876432 221111100000000 11112222455 56899999999976
Q ss_pred CCcccccc------------cCH--HHHhcCCCCcEEEEcCCCcccCH
Q 019387 246 LDKTTYHL------------INK--ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 246 l~~~t~~l------------i~~--~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
.. ...++ +-+ +.+....|++.+|+++- .+|.
T Consensus 77 ~~-~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN--Pv~~ 121 (308)
T 2d4a_B 77 IG-RKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN--PVDA 121 (308)
T ss_dssp CC-CCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHH
T ss_pred CC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC--chHH
Confidence 53 32332 110 12333358899999844 4443
No 383
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.28 E-value=0.027 Score=52.32 Aligned_cols=94 Identities=19% Similarity=0.162 Sum_probs=62.0
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC-ccccccCCHHHHhh-----c
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~-----~ 236 (342)
.|++|.|.|. |.||+.+++.+ +..|++|++.+++.+.. +.. ..+ +... .......++.+.+. .
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~-~~~-~~~-------g~~~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIA-KLKGCKVVGAAGSDEKI-AYL-KQI-------GFDAAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHH-HHT-------TCSEEEETTSCSCHHHHHHHHCTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH-Hhc-------CCcEEEecCCHHHHHHHHHHHhCCC
Confidence 5889999998 99999999985 78999999999876432 211 111 1110 01111134444433 4
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+++.+... .+ -...++.+++|..++.++-
T Consensus 215 ~d~vi~~~g~--~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 215 YDCYFDNVGG--EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEEESSCH--HH----HHHHHTTEEEEEEEEECCC
T ss_pred CeEEEECCCh--HH----HHHHHHHHhcCCEEEEEec
Confidence 7999888752 11 3567788999999999874
No 384
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.28 E-value=0.049 Score=50.80 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=59.3
Q ss_pred CeEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~-afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|+|+|.|.+|.+++..|+. ...-++..+|...+. .+.......... ... .+..+. .+..+.+++||+|+++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~-~~g~~~dl~~~~-~~~-~~~~v~--~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDR-TKGDALDLEDAQ-AFT-APKKIY--SGEYSDCKDADLVVITA 80 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH-HHHHHHHHHGGG-GGS-CCCEEE--ECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchH-HHHHHHHHHHHH-Hhc-CCeEEE--ECCHHHhCCCCEEEECC
Confidence 589999999999999988743 233489999997542 222111110000 000 111121 13356689999999998
Q ss_pred CCCcccccc-------cCH-------HHHhcCCCCcEEEEcCCCcccCH
Q 019387 245 VLDKTTYHL-------INK-------ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 245 pl~~~t~~l-------i~~-------~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
+.. ...+. .|. +.+....|++.+++++ ..+|.
T Consensus 81 g~~-~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~ 126 (318)
T 1ez4_A 81 GAP-QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA--NPVDI 126 (318)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC--CcHHH
Confidence 653 22221 111 2333446899999984 44444
No 385
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.27 E-value=0.063 Score=50.22 Aligned_cols=105 Identities=16% Similarity=0.274 Sum_probs=60.3
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
..++|+|+|.|.+|..+|..|+ .-|. +|..+|..++.......+ ......-.+ .+.......+. +.+++||+|++
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~-~~~~~~v~L~Di~~~~~~g~~~d-l~~~~~~~~-~~~~v~~t~d~-~a~~~aDiVIi 81 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAG-LKELGDVVLFDIAEGTPQGKGLD-IAESSPVDG-FDAKFTGANDY-AAIEGADVVIV 81 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHH-HHHHHHHHT-CCCCEEEESSG-GGGTTCSEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCchhHHHHHHH-HhchhhhcC-CCCEEEEeCCH-HHHCCCCEEEE
Confidence 4679999999999999999874 4455 999999987532111111 000000000 11112222344 67899999999
Q ss_pred cCCCCcccccc-----c--CH-------HHHhcCCCCcEEEEcCC
Q 019387 243 HPVLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~~pl~~~t~~l-----i--~~-------~~l~~mk~ga~lINvaR 273 (342)
+.+. +...++ + |. ..+....|++++++++-
T Consensus 82 aag~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 82 TAGV-PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp CCSC-CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred ccCc-CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 9753 322222 2 11 22333458899999984
No 386
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.26 E-value=0.026 Score=53.25 Aligned_cols=30 Identities=23% Similarity=0.455 Sum_probs=24.1
Q ss_pred eEEEEecCHHHHHHHHHHHhc--CCcEEEEEc
Q 019387 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a--fg~~V~~~d 196 (342)
+|||+|+|+||+.+.+.|... -+++|.+.+
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 799999999999999987433 358887654
No 387
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.24 E-value=0.016 Score=54.14 Aligned_cols=94 Identities=15% Similarity=0.099 Sum_probs=60.3
Q ss_pred CCCeEEEEecC-HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------hc
Q 019387 164 KGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvgIvG~G-~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~~ 236 (342)
.|++|.|+|.| .||..+++.+ +.+|++|++.+++.+..... ..+ +....-.....++.+.+ ..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~~--~~l-------ga~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNNKHTEEL--LRL-------GAAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSSTTHHHH--HHH-------TCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCHHHHHHH--HhC-------CCcEEEeCCcccHHHHHHHHhCCCC
Confidence 58899999998 9999999985 88999999999876543111 111 11110000112333322 25
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.|... +.+ ...+..+++|..++.++-
T Consensus 214 ~Dvvid~~g~-~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 214 ADAAIDSIGG-PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEEESSCH-HHH-----HHHHHTEEEEEEEEECCC
T ss_pred CcEEEECCCC-hhH-----HHHHHHhcCCCEEEEEee
Confidence 7999988763 221 345578899999999873
No 388
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.24 E-value=0.026 Score=54.05 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=24.5
Q ss_pred eEEEEecCHHHHHHHHHHHhc--CCcEEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a--fg~~V~~~d~ 197 (342)
+|||+|+|+||+.++|.|... -+++|.+.+.
T Consensus 4 kVgInGfGrIGr~vlR~l~~~~~~~veIVaInd 36 (380)
T 2d2i_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINN 36 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHhcCCCCCEEEEEEec
Confidence 799999999999999987432 3588876543
No 389
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.24 E-value=0.092 Score=49.70 Aligned_cols=102 Identities=16% Similarity=0.220 Sum_probs=58.0
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCC------cEEEEEc-CCch-hHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFK------MNLIYYD-LYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg------~~V~~~d-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 236 (342)
.+|+|+| .|.+|+.+.++|. ..+ .++..+. ++.. +.... .+..+. +.....+.. .+. +.+.+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~-~~~~~~~~~~ei~~l~s~~~agk~~~~---~~~~l~---~~~~~~~~~-~~~-~~~~~ 80 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLL-GHPAYADGRLRIGALTAATSAGSTLGE---HHPHLT---PLAHRVVEP-TEA-AVLGG 80 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHH-TCHHHHTTSEEEEEEEESSCTTSBGGG---TCTTCG---GGTTCBCEE-CCH-HHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHH-cCCCCCCccEEEEEEECCCcCCCchhh---hccccc---ccceeeecc-CCH-HHhcC
Confidence 5899999 9999999999974 544 5777653 2221 11110 000000 000111111 132 34568
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVAL 282 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL 282 (342)
+|+|++|+|.. ...+....++.|+.+|+.+-.--.+..+.
T Consensus 81 ~DvVf~alg~~------~s~~~~~~~~~G~~vIDlSa~~R~~~~~~ 120 (352)
T 2nqt_A 81 HDAVFLALPHG------HSAVLAQQLSPETLIIDCGADFRLTDAAV 120 (352)
T ss_dssp CSEEEECCTTS------CCHHHHHHSCTTSEEEECSSTTTCSCHHH
T ss_pred CCEEEECCCCc------chHHHHHHHhCCCEEEEECCCccCCcchh
Confidence 99999999854 24555555567899999875444444343
No 390
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.24 E-value=0.029 Score=52.12 Aligned_cols=67 Identities=18% Similarity=0.193 Sum_probs=46.9
Q ss_pred CeEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh---------
Q 019387 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (342)
Q Consensus 166 ktvgIvG~-G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll--------- 234 (342)
.++||||+ |.||+..++.+ +..+.++. ++|+.++.. .+.. .. .....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~---------~~--~~~~~~~~~~~ll~~~~~l~~~ 69 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAI-KDTGNCLVSAYDINDSVG--IIDS---------IS--PQSEFFTEFEFFLDHASNLKRD 69 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGG---------TC--TTCEEESSHHHHHHHHHHHTTS
T ss_pred eEEEEECCCcHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHh---------hC--CCCcEECCHHHHHHhhhhhhhc
Confidence 58999999 78999999987 56688766 578876531 1100 00 1123457888887
Q ss_pred --hcCCEEEEcCCC
Q 019387 235 --READVISLHPVL 246 (342)
Q Consensus 235 --~~aDiV~l~~pl 246 (342)
.+.|+|++|.|.
T Consensus 70 ~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 70 SATALDYVSICSPN 83 (318)
T ss_dssp TTTSCCEEEECSCG
T ss_pred cCCCCcEEEECCCc
Confidence 568999999994
No 391
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.23 E-value=0.026 Score=53.20 Aligned_cols=71 Identities=13% Similarity=0.166 Sum_probs=46.1
Q ss_pred CeEEEEecCHHHHHHHHHHHh--c-----CCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc-
Q 019387 166 QTVGVIGAGRIGSAYARMMVE--G-----FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE- 236 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~--a-----fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~- 236 (342)
-+|||||+|.||+.-++.+.+ . .+++|. ++|++++. .+.+.+.| +.. ..+.++++++..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~-a~~~a~~~-------g~~----~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEA-VRAAAGKL-------GWS----TTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHH-HHHHHHHH-------TCS----EEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHH-HHHHHHHc-------CCC----cccCCHHHHhcCC
Confidence 389999999999987765421 1 134665 57887653 33333322 111 235789999964
Q ss_pred -CCEEEEcCCCCc
Q 019387 237 -ADVISLHPVLDK 248 (342)
Q Consensus 237 -aDiV~l~~pl~~ 248 (342)
-|+|++|+|..-
T Consensus 75 ~iDaV~I~tP~~~ 87 (390)
T 4h3v_A 75 DVQLVDVCTPGDS 87 (390)
T ss_dssp TCSEEEECSCGGG
T ss_pred CCCEEEEeCChHH
Confidence 789999999543
No 392
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.21 E-value=0.047 Score=50.93 Aligned_cols=115 Identities=15% Similarity=0.081 Sum_probs=69.0
Q ss_pred CCeEEEEecCHHHHH-HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh-hcCCEEEE
Q 019387 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISL 242 (342)
Q Consensus 165 gktvgIvG~G~IG~~-vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~aDiV~l 242 (342)
.++|.|||.|.+|.+ +|+.| +..|.+|.++|...........+ ..+.. +..-.+.+++. .++|+|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L-~~~G~~V~~~D~~~~~~~~~~L~-------~~gi~---v~~g~~~~~l~~~~~d~vV~ 72 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIA-KEAGFEVSGCDAKMYPPMSTQLE-------ALGID---VYEGFDAAQLDEFKADVYVI 72 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHH-HHTTCEEEEEESSCCTTHHHHHH-------HTTCE---EEESCCGGGGGSCCCSEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHH-HhCCCEEEEEcCCCCcHHHHHHH-------hCCCE---EECCCCHHHcCCCCCCEEEE
Confidence 578999999999996 88887 68999999999875422111111 11211 11112234444 47999988
Q ss_pred cCCCCccc----------ccccCHH-HHhc--CCC-CcEEEEcCCCcccCHHHHHHHHHcCC
Q 019387 243 HPVLDKTT----------YHLINKE-RLAT--MKK-EAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 243 ~~pl~~~t----------~~li~~~-~l~~--mk~-ga~lINvaRG~~vd~~aL~~aL~~g~ 290 (342)
..-..+++ ..++++. .|.. +++ ..+-|-=+.|..-...-+.+.|+...
T Consensus 73 Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 73 GNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp CTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 64332222 1244443 3332 332 34566667899888887778887643
No 393
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.20 E-value=0.067 Score=50.23 Aligned_cols=107 Identities=12% Similarity=0.152 Sum_probs=61.3
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
....++|+|+|.|.||..+|..|+ ..|. ++..+|..... .+........-. .... ........+.+ .+++||+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~L~Di~~~~-~~g~a~DL~~~~-~~~~-~~~i~~~~d~~-~~~~aDi 90 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISIL-MKDLADELALVDVIEDK-LKGEMMDLQHGS-LFLK-TPKIVSSKDYS-VTANSKL 90 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSCHHH-HHHHHHHHHHTG-GGCS-CCEEEECSSGG-GGTTEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEeCChHH-HHHHHHhhhhhh-hccC-CCeEEEcCCHH-HhCCCCE
Confidence 346789999999999999998765 3354 89999987542 222111110000 0000 11111224555 4899999
Q ss_pred EEEcCCCCc---ccc-cccCH---------HHHhcCCCCcEEEEcCC
Q 019387 240 ISLHPVLDK---TTY-HLINK---------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 240 V~l~~pl~~---~t~-~li~~---------~~l~~mk~ga~lINvaR 273 (342)
|+++..... +|| .++.. +.+....|++++++++-
T Consensus 91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999864321 222 22221 23444578999999984
No 394
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.16 E-value=0.091 Score=49.34 Aligned_cols=97 Identities=13% Similarity=0.014 Sum_probs=60.1
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc--ccCCHHHHh------
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEVL------ 234 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ll------ 234 (342)
.|++|.|+|.|.+|...++. ++.+|++ |++.+.++++.... ..+. ......... ...++.+.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~~~a--~~l~-----~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLC-AKAAGACPLVITDIDEGRLKFA--KEIC-----PEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHH-HHHTTCCSEEEEESCHHHHHHH--HHHC-----TTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEECCCHHHHHHH--HHhc-----hhcccccccccchHHHHHHHHHHhCC
Confidence 48899999999999999998 5899998 88888876543111 1110 000000000 001222222
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
...|+|+-+... +. .-...++.+++|..++.++-
T Consensus 251 ~g~Dvvid~~g~-~~----~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 251 IEPAVALECTGV-ES----SIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCCSEEEECSCC-HH----HHHHHHHHSCTTCEEEECCC
T ss_pred CCCCEEEECCCC-hH----HHHHHHHHhcCCCEEEEEcc
Confidence 258999998863 21 12456788999999999874
No 395
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.15 E-value=0.015 Score=54.36 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=60.2
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcC--CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc-cCCHHHHhh--cC
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR--EA 237 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~af--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~~ll~--~a 237 (342)
.|++|.|+|.|.||...++. ++.+ |++|++.++++++... ...+ +.... .... .+..+++-. ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiql-ak~~~~Ga~Vi~~~~~~~~~~~--~~~l-------Ga~~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQI-LKALMKNITIVGISRSKKHRDF--ALEL-------GADYVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHH-HHHHCTTCEEEEECSCHHHHHH--HHHH-------TCSEEECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHHH--HHHh-------CCCEEeccccchHHHHHhhcCCCc
Confidence 68999999999999999998 5888 9999999987654311 1111 11110 0000 001222221 57
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+|+.++.. +++ -...++.++++..++.++-
T Consensus 240 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVGT-EET----TYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEESSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCCC-hHH----HHHHHHHhhcCCEEEEeCC
Confidence 999998863 211 2456788888888888763
No 396
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=95.14 E-value=0.06 Score=48.59 Aligned_cols=108 Identities=16% Similarity=0.185 Sum_probs=63.6
Q ss_pred cccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC----ccccccCCHHHHhh
Q 019387 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP----VTWKRASSMDEVLR 235 (342)
Q Consensus 161 ~~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~ll~ 235 (342)
..+.||++.|.|- |.||+++|+.|+ .-|++|++.+++.....+...... ...+... .......++++++.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSEI----EQAGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHH----HhcCCcEEEEECCCCCHHHHHHHHH
Confidence 4689999999996 689999999985 679999988666544333322211 1111110 01111223444444
Q ss_pred -------cCCEEEEcCCCCcc------c----c-----c-----ccCHHHHhcCCCCcEEEEcCC
Q 019387 236 -------EADVISLHPVLDKT------T----Y-----H-----LINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 -------~aDiV~l~~pl~~~------t----~-----~-----li~~~~l~~mk~ga~lINvaR 273 (342)
.-|+++.+.-.... + . + .+.+..+..|+++..+||++.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 67999887643211 0 0 1 112345677888888999864
No 397
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.14 E-value=0.042 Score=51.83 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=24.7
Q ss_pred eEEEEecCHHHHHHHHHHHh---cCCcEEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVE---GFKMNLIYYDL 197 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~---afg~~V~~~d~ 197 (342)
+|||+|+|.||+.+.|.|.. .=+++|.+.+.
T Consensus 4 kVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~ 37 (339)
T 2x5j_O 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINE 37 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence 79999999999999998743 22688876544
No 398
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.14 E-value=0.042 Score=51.94 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=47.5
Q ss_pred CeEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEEE
Q 019387 166 QTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvgIvG~G~IG~-~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV~ 241 (342)
.+|||||+|.+|. ..+..+ +.-++++. ++|+.++. .+.+.+.| +. ...+.++++++.. .|+|+
T Consensus 27 irvgiiG~G~~~~~~~~~~~-~~~~~~lvav~d~~~~~-a~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~V~ 93 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCL-LRAGARLAGFHEKDDAL-AAEFSAVY-------AD----ARRIATAEEILEDENIGLIV 93 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHH-HHTTCEEEEEECSCHHH-HHHHHHHS-------SS----CCEESCHHHHHTCTTCCEEE
T ss_pred cEEEEECcCHHHHHHHHHHh-hcCCcEEEEEEcCCHHH-HHHHHHHc-------CC----CcccCCHHHHhcCCCCCEEE
Confidence 5899999999995 466665 45688866 57887653 23322222 11 1235799999975 89999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+|.|..
T Consensus 94 I~tp~~ 99 (361)
T 3u3x_A 94 SAAVSS 99 (361)
T ss_dssp ECCCHH
T ss_pred EeCChH
Confidence 999843
No 399
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.12 E-value=0.015 Score=55.11 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=51.1
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc---cCCCCccccccCCHHHHhh-cCCEE
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA---NGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~ll~-~aDiV 240 (342)
.+|||+| .|.||+.+++.|.+.=+++|.++.++.......+...+..+... .+.....+.. .+.++++. ++|+|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIP-TDPKHEEFEDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEE-SCTTSGGGTTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEe-CCHHHHhcCCCCEE
Confidence 4899999 99999999999743224688766321111101111111100000 0000011111 13455556 89999
Q ss_pred EEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 241 ~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
++|+|... ++.+. . ...+.|+.+|+.+-
T Consensus 88 ~~atp~~~-~~~~a-~---~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 88 FSALPSDL-AKKFE-P---EFAKEGKLIFSNAS 115 (354)
T ss_dssp EECCCHHH-HHHHH-H---HHHHTTCEEEECCS
T ss_pred EECCCchH-HHHHH-H---HHHHCCCEEEECCc
Confidence 99998421 11111 1 12346788888763
No 400
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.11 E-value=0.086 Score=47.16 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=33.7
Q ss_pred ccCCCeEEEEecC---HHHHHHHHHHHhcCCcEEEEEcCCchh
Q 019387 162 LLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 162 ~L~gktvgIvG~G---~IG~~vA~~l~~afg~~V~~~d~~~~~ 201 (342)
.|.||++.|-|-+ .||+++|+.|+ ..|++|++.+++.+.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~ 44 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERS 44 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSGGG
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-HCCCEEEEEECCHHH
Confidence 5899999999974 69999999985 789999999987643
No 401
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.06 E-value=0.035 Score=53.05 Aligned_cols=100 Identities=14% Similarity=0.070 Sum_probs=61.6
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCH-HH----Hhh--
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DE----VLR-- 235 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~----ll~-- 235 (342)
.|++|.|+|.|.||...++. ++.+|+ +|++.+++++.. +. ...+ +........ .++ .+ +..
T Consensus 185 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~-~~-a~~l-------Ga~~i~~~~-~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAG-ARLLGAACVIVGDQNPERL-KL-LSDA-------GFETIDLRN-SAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHTCSEEEEEESCHHHH-HH-HHTT-------TCEEEETTS-SSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEEcCCHHHH-HH-HHHc-------CCcEEcCCC-cchHHHHHHHHhCCC
Confidence 48899999999999999998 588999 999999876543 11 1111 211111111 121 22 222
Q ss_pred cCCEEEEcCCCCccc-----c----cccCHHHHhcCCCCcEEEEcCCC
Q 019387 236 EADVISLHPVLDKTT-----Y----HLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t-----~----~li~~~~l~~mk~ga~lINvaRG 274 (342)
..|+|+-++...... . .-.-...++.+++|..++.++-.
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 489999998643100 0 00124567888889888887643
No 402
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.05 E-value=0.036 Score=53.37 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=49.1
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCC---cEEEEEcCCchhHHHHHHhhhhhhhhccCCC--CccccccCCHHHHhhc--CC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFK---MNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLRE--AD 238 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ll~~--aD 238 (342)
++|+|+|.|.||+.+++.|+ ..| .+|.+++++.+. .+...+.+.... ..... ........++++++++ +|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~-~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA-MNREVFSHITLASRTLSK-CQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TCTTTCCEEEEEESCHHH-HHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCceEEEEEECCHHH-HHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 58999999999999999985 555 499999998754 222222221100 00000 0111123467888888 89
Q ss_pred EEEEcCCC
Q 019387 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~~pl 246 (342)
+|+.+.|.
T Consensus 79 vVin~ag~ 86 (405)
T 4ina_A 79 IVLNIALP 86 (405)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999873
No 403
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.04 E-value=0.022 Score=53.78 Aligned_cols=94 Identities=15% Similarity=0.099 Sum_probs=61.8
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----cC
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~a 237 (342)
.|++|.|+| .|.||..+++.+ +.+|++|++.+++++.. +. ...+ +....-.....++.+.+. ..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a-~~~Ga~Vi~~~~~~~~~-~~-~~~~-------Ga~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLS-KKAKCHVIGTCSSDEKS-AF-LKSL-------GCDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHH-HHTTCEEEEEESSHHHH-HH-HHHT-------TCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HhCCCEEEEEECCHHHH-HH-HHHc-------CCcEEEecCChhHHHHHHHhcCCCC
Confidence 488999999 799999999985 89999999999876432 11 1111 111100001123444332 47
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+|+.|... . .-...++.++++..+|.++-
T Consensus 233 D~vid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 233 DVVYESVGG--A----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEECSCT--H----HHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCH--H----HHHHHHHHHhcCCEEEEEeC
Confidence 999988763 1 23467788999999999875
No 404
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.03 E-value=0.052 Score=52.77 Aligned_cols=75 Identities=15% Similarity=0.212 Sum_probs=48.4
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccC----CHHHHhh--cCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS----SMDEVLR--EAD 238 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~ll~--~aD 238 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+.++.. +.+.+.+. ..+... ...+. +++++++ +.|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~~----~~g~~~--~~~~~~~~~~~~~ll~~~~vD 93 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMV-GRAQEILK----KNGKKP--AKVFGNGNDDYKNMLKDKNID 93 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHH-HHHHHHHH----HTTCCC--CEEECSSTTTHHHHTTCTTCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHHH----hcCCCC--CceeccCCCCHHHHhcCCCCC
Confidence 4899999999999999887432378875 678876532 22211110 011110 11234 8999997 589
Q ss_pred EEEEcCCCC
Q 019387 239 VISLHPVLD 247 (342)
Q Consensus 239 iV~l~~pl~ 247 (342)
+|++|+|..
T Consensus 94 ~V~i~tp~~ 102 (444)
T 2ixa_A 94 AVFVSSPWE 102 (444)
T ss_dssp EEEECCCGG
T ss_pred EEEEcCCcH
Confidence 999999943
No 405
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.02 E-value=0.1 Score=49.34 Aligned_cols=101 Identities=14% Similarity=0.179 Sum_probs=60.2
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
+-.+||||| .|.+|+++.++|..-=..++......... -....+.+..+. ....+.. .+.++++.++|++++
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~~~~~~p~~~-----~~l~~~~-~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKLEEIFPSTL-----ENSILSE-FDPEKVSKNCDVLFT 84 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBHHHHCGGGC-----CCCBCBC-CCHHHHHHHCSEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCChHHhChhhc-----cCceEEe-CCHHHhhcCCCEEEE
Confidence 456899997 79999999999853324576665432211 111111111111 1122222 245666688999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccC
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd 278 (342)
|+|.. ...+....+ .|+.+|+.+-.-=.+
T Consensus 85 alp~~------~s~~~~~~~-~g~~VIDlSsdfRl~ 113 (351)
T 1vkn_A 85 ALPAG------ASYDLVREL-KGVKIIDLGADFRFD 113 (351)
T ss_dssp CCSTT------HHHHHHTTC-CSCEEEESSSTTTCS
T ss_pred CCCcH------HHHHHHHHh-CCCEEEECChhhhCC
Confidence 99943 335566666 799999998543344
No 406
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.01 E-value=0.088 Score=50.75 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=48.0
Q ss_pred CeEEEEecCH---HHHHHHHHHHhcCCcEEE--EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc----
Q 019387 166 QTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---- 236 (342)
Q Consensus 166 ktvgIvG~G~---IG~~vA~~l~~afg~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---- 236 (342)
.+|||||+|. ||+..+..+...-++++. ++|+.++. .+.+.+.+ +... ...+.++++++..
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~-a~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~~ 107 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEK-AEASGREL-------GLDP--SRVYSDFKEMAIREAKL 107 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHH-HHHHHHHH-------TCCG--GGBCSCHHHHHHHHHHC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHH-HHHHHHHc-------CCCc--ccccCCHHHHHhccccc
Confidence 4899999999 999988775323347776 46887653 23322222 1110 1245799999986
Q ss_pred ---CCEEEEcCCCCc
Q 019387 237 ---ADVISLHPVLDK 248 (342)
Q Consensus 237 ---aDiV~l~~pl~~ 248 (342)
.|+|++|.|...
T Consensus 108 ~~~vD~V~I~tp~~~ 122 (417)
T 3v5n_A 108 KNGIEAVAIVTPNHV 122 (417)
T ss_dssp TTCCSEEEECSCTTS
T ss_pred CCCCcEEEECCCcHH
Confidence 899999999643
No 407
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.01 E-value=0.051 Score=50.54 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=44.1
Q ss_pred CeEEEEecCHHHHHHHHHHHh-cCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----cCC
Q 019387 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~-afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~aD 238 (342)
.+|||||+|.||+.+++.+.+ .-++++. ++|+.++.....+.+.+ +.. ....+.++++. +.|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-------g~~----~~~~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-------GVT----TTYAGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-------TCC----EESSHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-------CCC----cccCCHHHHHhccCCCCCc
Confidence 489999999999999998744 3467765 57877554112211111 110 01246677764 479
Q ss_pred EEEEcCC
Q 019387 239 VISLHPV 245 (342)
Q Consensus 239 iV~l~~p 245 (342)
+|+.|+|
T Consensus 74 vV~~atp 80 (312)
T 1nvm_B 74 FVFDATS 80 (312)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999998
No 408
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.01 E-value=0.033 Score=52.91 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=60.0
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccc----cCCHH----HHh
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR----ASSMD----EVL 234 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~----~ll 234 (342)
.|++|.|+|.|.+|...++. ++.+| .+|++.+++++.... ...+ +.... +.. ..++. ++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~~~~~~~~--~~~l-------Ga~~v-i~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVI-ARSLGAENVIVIAGSPNRLKL--AEEI-------GADLT-LNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHH-HHHTTBSEEEEEESCHHHHHH--HHHT-------TCSEE-EETTTSCHHHHHHHHHHHT
T ss_pred CCCEEEEECcCHHHHHHHHH-HHHcCCceEEEEcCCHHHHHH--HHHc-------CCcEE-EeccccCcchHHHHHHHHh
Confidence 48899999999999999998 58999 599999987654311 1111 11110 110 01222 222
Q ss_pred h--cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 235 R--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~--~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
. ..|+|+.++...+ .-...++.++++..+|.++-
T Consensus 264 ~g~g~Dvvid~~g~~~-----~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 264 HGRGADFILEATGDSR-----ALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TTSCEEEEEECSSCTT-----HHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCcEEEECCCCHH-----HHHHHHHHHhcCCEEEEEec
Confidence 2 4799998886321 12456788889989998874
No 409
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.98 E-value=0.05 Score=51.37 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=52.2
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|||+| .|.||+.+.+.|...=.+++.+.....+.. .++...+..+ .+..... ..++++ +.++|+|+.|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~---~g~~~~~---~~~~~~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNL---RGRTNLK---FVPPEK-LEPADILVLAL 76 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGG---TTTCCCB---CBCGGG-CCCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchh---cCccccc---ccchhH-hcCCCEEEEcC
Confidence 4899999 899999999997433346877654432211 1111111100 0101111 123333 47899999999
Q ss_pred CCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 245 VLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|.... +.+. -..++.|+.+|+.+-
T Consensus 77 g~~~s-~~~a----~~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 77 PHGVF-AREF----DRYSALAPVLVDLSA 100 (345)
T ss_dssp CTTHH-HHTH----HHHHTTCSEEEECSS
T ss_pred CcHHH-HHHH----HHHHHCCCEEEEcCc
Confidence 85422 1111 122467888999864
No 410
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.98 E-value=0.1 Score=47.56 Aligned_cols=38 Identities=24% Similarity=0.127 Sum_probs=32.8
Q ss_pred cccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCc
Q 019387 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (342)
Q Consensus 161 ~~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~ 199 (342)
..+.||++.|.|- |.||+.+|+.|+ .-|++|++.++..
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~ 83 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPA 83 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCc
Confidence 4688999999996 689999999985 6799999988864
No 411
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.95 E-value=0.035 Score=52.42 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=57.4
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhccCCCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|+|+|.+|.++|+.|+ ..|. ++..+|...- .+.+...+..... .....
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La-~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~l---np~v~ 107 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLI-LAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNL---NPMVD 107 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHT---CTTSE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhH---CCCeE
Confidence 4688999999999999999999985 5577 7888875421 1111111111000 00000
Q ss_pred ccccc---cCCHHHHhhcCCEEEEcCCCCcccccccCHHHHh
Q 019387 222 VTWKR---ASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (342)
Q Consensus 222 ~~~~~---~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~ 260 (342)
..... ....++++.++|+|+.|. .+.+++..+++...+
T Consensus 108 v~~~~~~~~~~~~~~~~~~dvVv~~~-d~~~~r~~ln~~~~~ 148 (346)
T 1y8q_A 108 VKVDTEDIEKKPESFFTQFDAVCLTC-CSRDVIVKVDQICHK 148 (346)
T ss_dssp EEEECSCGGGCCHHHHTTCSEEEEES-CCHHHHHHHHHHHHH
T ss_pred EEEEecccCcchHHHhcCCCEEEEcC-CCHHHHHHHHHHHHH
Confidence 10100 012467889999999886 467777777775444
No 412
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.95 E-value=0.16 Score=49.96 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=68.8
Q ss_pred cccCCCeEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhh---hhccCCCCcccccc
Q 019387 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF---LKANGEQPVTWKRA 227 (342)
Q Consensus 161 ~~L~gktvgIvG~G----------~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 227 (342)
..+.|++|+|+|+- .=...+++.| ...|++|.+|||........ .|+.. +.... ......
T Consensus 324 ~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~~~~~~~~~~~---~~~~~~ 396 (478)
T 2y0c_A 324 EDLTGRTFAIWGLAFKPNTDDMREAPSRELIAEL-LSRGARIAAYDPVAQEEARR---VIALDLADHPSWL---ERLSFV 396 (478)
T ss_dssp SCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECTTTHHHHHH---HHHHHTTTCHHHH---TTEEEC
T ss_pred ccCCCCEEEEEecccCCCCCccccChHHHHHHHH-HHCCCEEEEECCCccHHHHH---hhccccccccccc---cceeec
Confidence 36889999999983 3567888887 68999999999986432111 11100 00000 012234
Q ss_pred CCHHHHhhcCCEEEEcCCCCcccccccCHHHH-hcCCCCcEEEEcCCCcccCHHHH
Q 019387 228 SSMDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVAL 282 (342)
Q Consensus 228 ~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l-~~mk~ga~lINvaRG~~vd~~aL 282 (342)
.++++.++++|+|+++..- ++-+ -++.+.+ +.|+ +.+++|+ |+ ++|.+.+
T Consensus 397 ~~~~~~~~~ad~~vi~t~~-~~f~-~~~~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 447 (478)
T 2y0c_A 397 DDEAQAARDADALVIVTEW-KIFK-SPDFVALGRLWK-TPVIFDG-RN-LYEPETM 447 (478)
T ss_dssp SSHHHHTTTCSEEEECSCC-GGGG-SCCHHHHHTTCS-SCEEEES-SC-CSCHHHH
T ss_pred CCHHHHHhCCCEEEEecCC-hHhh-ccCHHHHHhhcC-CCEEEEC-CC-CCCHHHH
Confidence 6788999999999999864 3333 2344444 4566 4788887 54 4565543
No 413
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=94.92 E-value=1.2 Score=42.74 Aligned_cols=106 Identities=20% Similarity=0.308 Sum_probs=65.3
Q ss_pred ccCCCeEEEEec-----C---HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHH
Q 019387 162 LLKGQTVGVIGA-----G---RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (342)
Q Consensus 162 ~L~gktvgIvG~-----G---~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 233 (342)
.|.|++|+|+|- | ++.++.+..+ ..||++|.+..|..-...+...+.........+ ..+....++++.
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~-~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G---~~i~~~~d~~ea 263 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLM-TRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASG---GSFRQVTSMEEA 263 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHH-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHH
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CEEEEEcCHHHH
Confidence 478999999973 5 7889999886 579999999887531111111110000011111 123345789999
Q ss_pred hhcCCEEEEcCCCC--c-------------------c----------cccccCHHHHhcCCC-CcEEEEc
Q 019387 234 LREADVISLHPVLD--K-------------------T----------TYHLINKERLATMKK-EAILVNC 271 (342)
Q Consensus 234 l~~aDiV~l~~pl~--~-------------------~----------t~~li~~~~l~~mk~-ga~lINv 271 (342)
++++|+|..-+-.+ . + ...-+|.+.++..++ +++|.=+
T Consensus 264 v~~aDvVytd~W~Smg~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHc 333 (399)
T 3q98_A 264 FKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHC 333 (399)
T ss_dssp HTTCSEEEECCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCC
T ss_pred hCCCCEEEecCccccchhhhhhhhccccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECC
Confidence 99999998754211 0 0 124478888888874 7777655
No 414
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.82 E-value=0.082 Score=51.62 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=65.6
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhh-hhh-h-hhcc-CC-------CCccccccCCHHHH
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTA-YGQ-F-LKAN-GE-------QPVTWKRASSMDEV 233 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~-~~~-~-~~~~-~~-------~~~~~~~~~~l~~l 233 (342)
-+|||||+|.||+..++.+.+.-++++. ++|++++.. +.+... |+. + +... .. .......+++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era-~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNT-FKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHH-HHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 4899999999999999887434478876 578876543 222111 110 0 0000 00 00012245789999
Q ss_pred hh--cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCce
Q 019387 234 LR--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMF 292 (342)
Q Consensus 234 l~--~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~aL~~g~i~ 292 (342)
+. +.|+|++++|.. +.+. +-.+..++.|.-++...-+-. .+-+.|.++-++..+.
T Consensus 103 L~d~dIDaVviaTp~p-~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP-EVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp HTCTTCCEEEECSCCH-HHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hcCCCCCEEEEcCCCh-HHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 97 489999999842 2211 223445556655553221111 1234566655544333
No 415
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.80 E-value=0.14 Score=47.51 Aligned_cols=108 Identities=21% Similarity=0.257 Sum_probs=64.5
Q ss_pred eEEEEe-cCHHHHHHHHHHHh--cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccccc--CCHHHHhhcCCEEE
Q 019387 167 TVGVIG-AGRIGSAYARMMVE--GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLREADVIS 241 (342)
Q Consensus 167 tvgIvG-~G~IG~~vA~~l~~--afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ll~~aDiV~ 241 (342)
+|+|+| .|.+|+.+|..|+. .+.-++..+|..+. .+..... +... ..+...... ++..+.+++||+|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~--~~G~a~D----l~~~-~~~~~v~~~~~~~~~~~~~~aDivi 74 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV--TPGVAVD----LSHI-PTAVKIKGFSGEDATPALEGADVVL 74 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT--HHHHHHH----HHTS-CSSEEEEEECSSCCHHHHTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC--chhHHHH----hhCC-CCCceEEEecCCCcHHHhCCCCEEE
Confidence 799999 99999999998754 36678999998762 1111111 1111 111112111 24567889999999
Q ss_pred EcCCCCc---ccc-ccc--CH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 019387 242 LHPVLDK---TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (342)
Q Consensus 242 l~~pl~~---~t~-~li--~~-------~~l~~mk~ga~lINvaRG~~vd~~aL~ 283 (342)
++.+... .|| .++ |. +.+....|++++++++ +.+|.-..+
T Consensus 75 i~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 75 ISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp ECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 9875421 121 122 11 2233445788999995 567666555
No 416
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.79 E-value=0.019 Score=56.51 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=53.9
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCc---EEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc-ccCC----HHHHhhc
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-RASS----MDEVLRE 236 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----l~~ll~~ 236 (342)
.++|.|||+|.||+.+|+.|++..++ +|+..|+....+. ..+.. +....... ..++ ++.++++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~--~~~~~-------g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD--VAQQY-------GVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC--HHHHH-------TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh--HHhhc-------CCceeEEeccchhHHHHHHHHhcC
Confidence 34699999999999999998766665 6888887654321 00100 10000000 0122 3445666
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcC-CCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATM-KKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~m-k~ga~lINvaR 273 (342)
.|+|+.+.+.. .+-..++.+ +.|+-.+|++=
T Consensus 84 ~DvVIN~s~~~------~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 84 NDFLIDVSIGI------SSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp TCEEEECCSSS------CHHHHHHHHHHHTCEEEESSC
T ss_pred CCEEEECCccc------cCHHHHHHHHHcCCCEEECCC
Confidence 68888766532 223333333 46888888874
No 417
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.79 E-value=0.04 Score=53.61 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=48.9
Q ss_pred CeEEEEec----CHHHHHHHHHHHhcC--CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--c
Q 019387 166 QTVGVIGA----GRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E 236 (342)
Q Consensus 166 ktvgIvG~----G~IG~~vA~~l~~af--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~ 236 (342)
.+|||||+ |.||+..++.| +.. ++++. ++|+.++. .+.+.+.+ +.. ....+.++++++. +
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l-~~~~~~~~lvav~d~~~~~-~~~~a~~~-------g~~--~~~~~~~~~~ll~~~~ 89 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAI-LQLSSQFQITALYSPKIET-SIATIQRL-------KLS--NATAFPTLESFASSST 89 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHH-HHTTTTEEEEEEECSSHHH-HHHHHHHT-------TCT--TCEEESSHHHHHHCSS
T ss_pred CEEEEEcccCCCChHHHHHHHHH-HhcCCCeEEEEEEeCCHHH-HHHHHHHc-------CCC--cceeeCCHHHHhcCCC
Confidence 48999999 99999999987 455 78875 68887653 22222222 111 1123578999997 5
Q ss_pred CCEEEEcCCC
Q 019387 237 ADVISLHPVL 246 (342)
Q Consensus 237 aDiV~l~~pl 246 (342)
.|+|++|+|.
T Consensus 90 vD~V~i~tp~ 99 (438)
T 3btv_A 90 IDMIVIAIQV 99 (438)
T ss_dssp CSEEEECSCH
T ss_pred CCEEEEeCCc
Confidence 8999999984
No 418
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.72 E-value=0.028 Score=45.00 Aligned_cols=100 Identities=14% Similarity=0.098 Sum_probs=67.3
Q ss_pred CeEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 166 QTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 166 ktvgIvG~----G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
++|.|||. |+.|..+.+.| +..|.+|+-.+|..... .+...+.++.++-. -|+++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L-~~~g~~V~pVnP~~~~i-------------------~G~~~y~sl~dlp~-vDlav 63 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERL-KSHGHEFIPVGRKKGEV-------------------LGKTIINERPVIEG-VDTVT 63 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHH-HHHTCCEEEESSSCSEE-------------------TTEECBCSCCCCTT-CCEEE
T ss_pred CEEEEEccCCCCCCHHHHHHHHH-HHCCCeEEEECCCCCcC-------------------CCeeccCChHHCCC-CCEEE
Confidence 68999998 56899999997 67788999998864321 12234567777767 99999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~ 293 (342)
+++|. +.+..++.+- ..+...+++++-+- .++++.+..++..+.-
T Consensus 64 i~~p~-~~v~~~v~e~--~~~g~k~v~~~~G~----~~~e~~~~a~~~Girv 108 (122)
T 3ff4_A 64 LYINP-QNQLSEYNYI--LSLKPKRVIFNPGT----ENEELEEILSENGIEP 108 (122)
T ss_dssp ECSCH-HHHGGGHHHH--HHHCCSEEEECTTC----CCHHHHHHHHHTTCEE
T ss_pred EEeCH-HHHHHHHHHH--HhcCCCEEEECCCC----ChHHHHHHHHHcCCeE
Confidence 99984 4455555443 22344467765542 3456777777766653
No 419
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.70 E-value=0.083 Score=52.03 Aligned_cols=70 Identities=10% Similarity=0.174 Sum_probs=48.8
Q ss_pred CeEEEEec----CHHHHHHHHHHHhcC--CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--c
Q 019387 166 QTVGVIGA----GRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E 236 (342)
Q Consensus 166 ktvgIvG~----G~IG~~vA~~l~~af--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~ 236 (342)
.+|||||+ |.||+..++.|. .. ++++. ++|+.++. .+.+.+.+ +... ...+.+++++++ +
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~-~~~~~~~lvav~d~~~~~-a~~~a~~~-------g~~~--~~~~~d~~ell~~~~ 108 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQ-QLSSQFQIVALYNPTLKS-SLQTIEQL-------QLKH--ATGFDSLESFAQYKD 108 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHH-HTTTTEEEEEEECSCHHH-HHHHHHHT-------TCTT--CEEESCHHHHHHCTT
T ss_pred CEEEEEcccCCCCHHHHHHHHHHH-hcCCCeEEEEEEeCCHHH-HHHHHHHc-------CCCc--ceeeCCHHHHhcCCC
Confidence 47999999 999999999874 54 78876 68887643 23322222 1110 123578999996 6
Q ss_pred CCEEEEcCCC
Q 019387 237 ADVISLHPVL 246 (342)
Q Consensus 237 aDiV~l~~pl 246 (342)
.|+|++|+|.
T Consensus 109 vD~V~I~tp~ 118 (479)
T 2nvw_A 109 IDMIVVSVKV 118 (479)
T ss_dssp CSEEEECSCH
T ss_pred CCEEEEcCCc
Confidence 8999999994
No 420
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.67 E-value=0.025 Score=52.36 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=62.5
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCC-HHHHhhcCCEEE
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS-MDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ll~~aDiV~ 241 (342)
.|++|.|+| .|.+|...++. ++.+|++|++.+... + .++...+ +....-.....+ +.+.+...|+|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~-a~~~Ga~vi~~~~~~-~--~~~~~~l-------Ga~~~i~~~~~~~~~~~~~g~D~v~ 220 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQL-AKQKGTTVITTASKR-N--HAFLKAL-------GAEQCINYHEEDFLLAISTPVDAVI 220 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHH-HHHTTCEEEEEECHH-H--HHHHHHH-------TCSEEEETTTSCHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHH-HHHcCCEEEEEeccc-h--HHHHHHc-------CCCEEEeCCCcchhhhhccCCCEEE
Confidence 488999997 99999999998 489999999886432 2 1222222 211110011123 666667899999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
-|+.. + .+ ...++.++++..++.++.
T Consensus 221 d~~g~-~----~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 221 DLVGG-D----VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp ESSCH-H----HH-HHHGGGEEEEEEEEECCS
T ss_pred ECCCc-H----HH-HHHHHhccCCCEEEEeCC
Confidence 98863 1 12 667889999999999864
No 421
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.66 E-value=0.12 Score=48.06 Aligned_cols=104 Identities=21% Similarity=0.298 Sum_probs=61.9
Q ss_pred eEEEEec-CHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccc---cCCHHHHhhcCCEE
Q 019387 167 TVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREADVI 240 (342)
Q Consensus 167 tvgIvG~-G~IG~~vA~~l~~afg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~ll~~aDiV 240 (342)
+|+|+|. |.+|+.++..|+ .-| -+|..+|..+... .. .. +.. ...+..... ..++++.+++||+|
T Consensus 2 KI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~~~~-~a--~d----L~~-~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAHTPG-VA--AD----LSH-IETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSSHHH-HH--HH----HTT-SSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred EEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCccHH-HH--HH----Hhc-cCcCceEEEecCCCCHHHHhCCCCEE
Confidence 7999998 999999999875 445 5899999876211 11 11 111 111111222 14688889999999
Q ss_pred EEcCCCCcc---cc-ccc--C----H---HHHhcCCCCcEEEEcCCCcccCHHH
Q 019387 241 SLHPVLDKT---TY-HLI--N----K---ERLATMKKEAILVNCSRGPVIDEVA 281 (342)
Q Consensus 241 ~l~~pl~~~---t~-~li--~----~---~~l~~mk~ga~lINvaRG~~vd~~a 281 (342)
+++...... ++ .++ | . +.+....|++.+|++ ...+|.-.
T Consensus 73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 999754321 11 110 1 1 122333578899997 45666654
No 422
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.65 E-value=0.03 Score=52.30 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=45.5
Q ss_pred CeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc--CCEEEE
Q 019387 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--aDiV~l 242 (342)
.+|||||+|.+|+..++.+ .-++++. ++|+.+..+.+++.+. ....+. ....+.++++++.+ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKA----ISEMNI---KPKKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHH----HHTTTC---CCEECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHH----HHHcCC---CCcccCCHHHHhcCCCCCEEEE
Confidence 4899999999999666653 4477877 4787763222221111 111111 11245799999975 899999
Q ss_pred cCCC
Q 019387 243 HPVL 246 (342)
Q Consensus 243 ~~pl 246 (342)
|.|.
T Consensus 74 ~tp~ 77 (337)
T 3ip3_A 74 NTVF 77 (337)
T ss_dssp CSSH
T ss_pred eCCc
Confidence 9984
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.60 E-value=0.2 Score=44.54 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=32.2
Q ss_pred ccCCCeEEEEec-CH--HHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 162 LLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~L~gktvgIvG~-G~--IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
.+.||++.|.|- |. ||+++|+.|+ ..|++|+..++...
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGER 44 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchH
Confidence 578999999997 45 9999999985 67999999887753
No 424
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.59 E-value=0.17 Score=46.38 Aligned_cols=109 Identities=14% Similarity=0.121 Sum_probs=72.0
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
+.|++|.|+|-+......++.| ...|.+|..+...... ....+.....++.+.++++|+|+.
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L-~~~g~~v~~~~~~~~~-----------------~~~~g~~~~~~~~~~~~~~d~ii~ 66 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKL-TEQQADIYLVGFDQLD-----------------HGFTGAVKCNIDEIPFQQIDSIIL 66 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHH-HHTTCEEEEESCTTSS-----------------CCCTTEEECCGGGSCGGGCSEEEC
T ss_pred ccCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeccccc-----------------cccccceeccchHHHHhcCCEEEe
Confidence 5678999999999999999987 6789998876321110 000111123456777889999987
Q ss_pred cCCCCc----------ccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 019387 243 HPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 243 ~~pl~~----------~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~a 294 (342)
..|... .+...++++.++.++++.+++ ++ +|..++.+++.+..+.-.
T Consensus 67 ~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~v~ 123 (300)
T 2rir_A 67 PVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRKLV 123 (300)
T ss_dssp CSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCCEE
T ss_pred ccccccCCcccccccccCCccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCEEE
Confidence 544321 233448899999999998877 33 266776666666666543
No 425
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.58 E-value=0.14 Score=50.08 Aligned_cols=110 Identities=14% Similarity=0.128 Sum_probs=67.2
Q ss_pred ccCCCeEEEEecCH----------HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcc-CCC-CccccccCC
Q 019387 162 LLKGQTVGVIGAGR----------IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-GEQ-PVTWKRASS 229 (342)
Q Consensus 162 ~L~gktvgIvG~G~----------IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 229 (342)
.+.|++|+|+|+.- -...+++.| ...|++|.+|||...... ....+.. .... +.. ...+....+
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 401 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYL-MDEGAHLHIYDPKVPREQ--IVVDLSH-PGVSEDDQVSRLVTISKD 401 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHH--HHHHHCC-------CHHHHHEEECSS
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHH-HHCCCEEEEEcCccCHHH--Hhhhhcc-ccccccccccCceeecCC
Confidence 47899999999863 678889997 689999999999854321 0011100 0000 000 001223357
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHHH-HhcCCCCcEEEEcCCCcccCH
Q 019387 230 MDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 230 l~~ll~~aDiV~l~~pl~~~t~~li~~~~-l~~mk~ga~lINvaRG~~vd~ 279 (342)
..+.++++|.|++++.- ++-+. ++.+. ...|+...+++|. |+- +|.
T Consensus 402 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~~-~~~ 448 (467)
T 2q3e_A 402 PYEACDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RRV-LDG 448 (467)
T ss_dssp HHHHHTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SCT-TTT
T ss_pred HHHHHhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CCc-CCc
Confidence 88889999999999863 34333 35444 4567776668876 554 443
No 426
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.52 E-value=0.085 Score=47.38 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=63.9
Q ss_pred cccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC----ccccccCCHHHHhh
Q 019387 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP----VTWKRASSMDEVLR 235 (342)
Q Consensus 161 ~~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~ll~ 235 (342)
..+.||++.|.|- |.||+++|+.|+ ..|++|++.+++.....+...+.. ...+... .......++++++.
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSEI----KALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHH----HhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4689999999986 589999999985 779999987665544333322211 1111110 01111223444443
Q ss_pred -------cCCEEEEcCCCCcc------c----c-----c-----ccCHHHHhcCCCCcEEEEcCCC
Q 019387 236 -------EADVISLHPVLDKT------T----Y-----H-----LINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 236 -------~aDiV~l~~pl~~~------t----~-----~-----li~~~~l~~mk~ga~lINvaRG 274 (342)
.-|+++.+.-.... + . + .+.+..+..|+++..+||++..
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 56999877543211 0 0 0 1124567788888889998753
No 427
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.52 E-value=0.14 Score=48.27 Aligned_cols=96 Identities=20% Similarity=0.182 Sum_probs=60.2
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh---hcCCE
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---READV 239 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll---~~aDi 239 (342)
.|++|.|.| .|.||+.+++.+ +.+|++|++.+. .+. .+. ...+ +....-.....++.+.+ ...|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla-~~~Ga~Vi~~~~-~~~-~~~-~~~l-------Ga~~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVM-KAWDAHVTAVCS-QDA-SEL-VRKL-------GADDVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEC-GGG-HHH-HHHT-------TCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HhCCCEEEEEeC-hHH-HHH-HHHc-------CCCEEEECCchHHHHHHhhcCCCCE
Confidence 589999999 799999999984 899999998873 322 221 1121 11110000112333333 35899
Q ss_pred EEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 240 V~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
|+.|......+ -...+..+++|..+|.++-.
T Consensus 252 vid~~g~~~~~----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 252 ILDNVGGSTET----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp EEESSCTTHHH----HGGGGBCSSSCCEEEESCCS
T ss_pred EEECCCChhhh----hHHHHHhhcCCcEEEEeCCC
Confidence 99988642111 13456788999999999854
No 428
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=94.52 E-value=0.04 Score=50.86 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=62.2
Q ss_pred eEEEEec-CHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCEEEE
Q 019387 167 TVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 167 tvgIvG~-G~IG~~vA~~l~~afg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDiV~l 242 (342)
++.|+|. |++|+.+++.+ ...|++ |..++|..... ...+...+.+++++.. ..|++++
T Consensus 15 ~v~V~Gasg~~G~~~~~~l-~~~g~~~V~~VnP~~~g~-----------------~i~G~~vy~sl~el~~~~~~Dv~ii 76 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKM-LECGTKIVGGVTPGKGGQ-----------------NVHGVPVFDTVKEAVKETDANASVI 76 (294)
T ss_dssp CEEEETTTSHHHHHHHHHH-HHTTCCEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHHCCCEEEE
T ss_pred EEEEECCCCCHHHHHHHHH-HhCCCeEEEEeCCCCCCc-----------------eECCEeeeCCHHHHhhcCCCCEEEE
Confidence 5788899 99999999987 566776 33555542100 0113344679999988 8999999
Q ss_pred cCCCCcccccccCHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCce
Q 019387 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPMF 292 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~-~vd~~aL~~aL~~g~i~ 292 (342)
++|- +.+...+. +.+++ +.. .+|..+-|= .-+++.|.++.++..+.
T Consensus 77 ~vp~-~~~~~~v~-ea~~~-Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 77 FVPA-PFAKDAVF-EAIDA-GIE-LIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp CCCH-HHHHHHHH-HHHHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred ccCH-HHHHHHHH-HHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 9983 22222222 22222 222 244444442 23456788888765553
No 429
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=94.51 E-value=0.04 Score=51.73 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=24.7
Q ss_pred eEEEEecCHHHHHHHHHHHhcCCcEEEEEcC
Q 019387 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 197 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~afg~~V~~~d~ 197 (342)
+|||+|+|+||+.+.|.|... +++|.+.+.
T Consensus 2 kVgInG~G~IGr~vlr~l~~~-~~evvaind 31 (331)
T 2g82_O 2 KVGINGFGRIGRQVFRILHSR-GVEVALIND 31 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCEEEEEec
Confidence 799999999999999987544 888886543
No 430
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.50 E-value=0.052 Score=50.66 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=60.6
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHH----HHh--h
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMD----EVL--R 235 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~----~ll--~ 235 (342)
.|++|.|+|. |.||+.+++.+ +.+|++|++.+++++.. +.. ..+ +.... ... ..++. ++. .
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a-~~~G~~Vi~~~~~~~~~-~~~-~~~-------ga~~~~d~~-~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIA-KLFGARVIATAGSEDKL-RRA-KAL-------GADETVNYT-HPDWPKEVRRLTGGK 234 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHH-HHTTCEEEEEESSHHHH-HHH-HHH-------TCSEEEETT-STTHHHHHHHHTTTT
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH-Hhc-------CCCEEEcCC-cccHHHHHHHHhCCC
Confidence 4889999999 99999999985 78999999999876543 111 111 11100 010 11222 222 2
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
..|+|+.+.. . + .-...++.++++..+|.++.
T Consensus 235 ~~d~vi~~~g-~-~----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 235 GADKVVDHTG-A-L----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp CEEEEEESSC-S-S----SHHHHHHHEEEEEEEEESSC
T ss_pred CceEEEECCC-H-H----HHHHHHHhhccCCEEEEEec
Confidence 5799998876 2 2 23566788888989998874
No 431
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.49 E-value=0.046 Score=50.60 Aligned_cols=93 Identities=11% Similarity=0.142 Sum_probs=60.1
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCH-HHHh-----h
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSM-DEVL-----R 235 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l-~~ll-----~ 235 (342)
.|++|.|.| .|.||+.+++.+ +..|++|++.+++++.. +.. ..+ +.... ... ..++ +++. .
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~V~~~~~~~~~~-~~~-~~~-------g~~~~~~~~-~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWA-KALGAKLIGTVGTAQKA-QSA-LKA-------GAWQVINYR-EEDLVERLKEITGGK 208 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHHTCEEEEEESSHHHH-HHH-HHH-------TCSEEEETT-TSCHHHHHHHHTTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH-HHH-HHc-------CCCEEEECC-CccHHHHHHHHhCCC
Confidence 488999999 799999999985 78899999999876432 111 111 11100 010 1122 2222 1
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
..|+++.+.. .+ .-...++.++++..+|.++-
T Consensus 209 ~~D~vi~~~g--~~----~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 209 KVRVVYDSVG--RD----TWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp CEEEEEECSC--GG----GHHHHHHTEEEEEEEEECCC
T ss_pred CceEEEECCc--hH----HHHHHHHHhcCCCEEEEEec
Confidence 4799998875 22 23567888999999999874
No 432
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.48 E-value=0.04 Score=52.19 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=31.4
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCC
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY 198 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~ 198 (342)
..|.+++|.|||.|.+|.++|+.|+ ..|. ++..+|..
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La-~aGvg~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILA-TSGIGEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-hCCCCeEEEECCC
Confidence 4688999999999999999999985 5566 78888864
No 433
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=94.47 E-value=0.046 Score=50.15 Aligned_cols=62 Identities=27% Similarity=0.352 Sum_probs=42.9
Q ss_pred CeEEEEecCHHHHHHHHHHHh---cCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--cCCE
Q 019387 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~---afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~aDi 239 (342)
.+|||||+|.||+..++.+.+ .-++++. ++|+.... ... +.. ..++++++. +.|+
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a-------------~~~-----g~~-~~~~~ell~~~~vD~ 68 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG-------------SLD-----EVR-QISLEDALRSQEIDV 68 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC-------------EET-----TEE-BCCHHHHHHCSSEEE
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH-------------HHc-----CCC-CCCHHHHhcCCCCCE
Confidence 389999999999999888632 2367766 46654211 000 111 368999997 6799
Q ss_pred EEEcCCC
Q 019387 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~~pl 246 (342)
|++|+|.
T Consensus 69 V~i~tp~ 75 (294)
T 1lc0_A 69 AYICSES 75 (294)
T ss_dssp EEECSCG
T ss_pred EEEeCCc
Confidence 9999984
No 434
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.41 E-value=0.056 Score=50.77 Aligned_cols=93 Identities=10% Similarity=0.008 Sum_probs=60.4
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC-ccccccCCH-HHH---h--h
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSM-DEV---L--R 235 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l-~~l---l--~ 235 (342)
.|++|.|.| .|.||..+++.+ +..|++|++.+++++.. +.. ..+ +... .... ..++ +++ . .
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~~~-~~~-------g~~~~~~~~-~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLT-RMAGAIPLVTAGSQKKL-QMA-EKL-------GAAAGFNYK-KEDFSEATLKFTKGA 230 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHH-HHH-------TCSEEEETT-TSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHcCCEEEEEeCCHHHH-HHH-HHc-------CCcEEEecC-ChHHHHHHHHHhcCC
Confidence 488999999 799999999985 78999999999876532 211 111 1110 0011 1122 222 2 1
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
..|+++.|... + .-...++.|++|..++.++-
T Consensus 231 ~~d~vi~~~G~-~-----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 231 GVNLILDCIGG-S-----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp CEEEEEESSCG-G-----GHHHHHHHEEEEEEEEECCC
T ss_pred CceEEEECCCc-h-----HHHHHHHhccCCCEEEEEec
Confidence 47999988763 1 12456888999999999874
No 435
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.39 E-value=0.076 Score=49.65 Aligned_cols=93 Identities=12% Similarity=0.042 Sum_probs=59.8
Q ss_pred CCeEEEE-ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------hcC
Q 019387 165 GQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------REA 237 (342)
Q Consensus 165 gktvgIv-G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~~a 237 (342)
+++|.|. |.|.||..+++.+ +.+|++|++.+++.++.... ..+ +....-.....++.+.+ ...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~~~--~~~-------Ga~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLA-KEEGFRPIVTVRRDEQIALL--KDI-------GAAHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESCGGGHHHH--HHH-------TCSEEEETTSTTHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--HHc-------CCCEEEECCcHHHHHHHHHHhcCCCC
Confidence 3577665 9999999999984 89999999999876543111 111 11111000112333322 269
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+|+-|... +. + ...+..++++..+|.++.
T Consensus 235 D~vid~~g~-~~----~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 235 RIFLDAVTG-PL----A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp CEEEESSCH-HH----H-HHHHHHSCTTCEEEECCC
T ss_pred cEEEECCCC-hh----H-HHHHhhhcCCCEEEEEec
Confidence 999998763 21 1 667899999999999973
No 436
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.38 E-value=0.15 Score=49.28 Aligned_cols=106 Identities=18% Similarity=0.250 Sum_probs=67.5
Q ss_pred cCCCeEEEEe-----cCH---HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh
Q 019387 163 LKGQTVGVIG-----AGR---IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 163 L~gktvgIvG-----~G~---IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll 234 (342)
|.|++|+||| +|+ +.++.+..+ ..||++|.+..|..-...+...+.........| ..+....++++++
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l-~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G---~~v~~~~d~~eav 261 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLM-TRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFG---GNFTKTNSMAEAF 261 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHH-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHS---SEEEEESCHHHHH
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcC---CEEEEEcCHHHHh
Confidence 7899999998 454 999999986 579999999887632111111110000011111 1233457899999
Q ss_pred hcCCEEEEcCCCC----------------c-------------c--cccccCHHHHhcCCC-CcEEEEcC
Q 019387 235 READVISLHPVLD----------------K-------------T--TYHLINKERLATMKK-EAILVNCS 272 (342)
Q Consensus 235 ~~aDiV~l~~pl~----------------~-------------~--t~~li~~~~l~~mk~-ga~lINva 272 (342)
+++|+|..-+-.. + + ...-++.+.++.+|+ +++|.-+.
T Consensus 262 ~~ADVVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcL 331 (418)
T 2yfk_A 262 KDADVVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCL 331 (418)
T ss_dssp TTCSEEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCS
T ss_pred cCCCEEEEccccchhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCC
Confidence 9999998753210 0 0 124568899999986 78887664
No 437
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.38 E-value=0.067 Score=49.66 Aligned_cols=78 Identities=19% Similarity=0.158 Sum_probs=47.7
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHH--HHHhhhhhhhhccCCCCc--cccccCCHHHHhh--c
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFVTAYGQFLKANGEQPV--TWKRASSMDEVLR--E 236 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~--~ 236 (342)
..++|.|.|- |.||+.+++.|+ ..|.+|++.++......+ .....+ ...+.... ......++.++++ +
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASL-DAHRPTYILARPGPRSPSKAKIFKAL----EDKGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHH-HTTCCEEEEECSSCCCHHHHHHHHHH----HHTTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-HCCCCEEEEECCCCCChhHHHHHHHH----HhCCcEEEEeecCCHHHHHHHHhhCC
Confidence 3578999998 999999999984 668999999887621111 100000 00111111 1112346778888 9
Q ss_pred CCEEEEcCCC
Q 019387 237 ADVISLHPVL 246 (342)
Q Consensus 237 aDiV~l~~pl 246 (342)
+|+|+.+...
T Consensus 84 ~d~Vi~~a~~ 93 (346)
T 3i6i_A 84 IDIVVSTVGG 93 (346)
T ss_dssp CCEEEECCCG
T ss_pred CCEEEECCch
Confidence 9999888764
No 438
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=94.37 E-value=0.074 Score=49.35 Aligned_cols=106 Identities=22% Similarity=0.213 Sum_probs=60.3
Q ss_pred CeEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcC
Q 019387 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~-afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~ 244 (342)
.+|+|+|.|.+|.+++..|+. ...-++..+|...+. .+........-. ... .+..+.. .+ .+.+++||+|+++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k-~~g~a~dl~~~~-~~~-~~~~v~~-~~-~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKL-AQAHAEDILHAT-PFA-HPVWVWA-GS-YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHH-HHHHHHHHHTTG-GGS-CCCEEEE-CC-GGGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhH-HHHHHHHHHHhH-hhc-CCeEEEE-CC-HHHhCCCCEEEECC
Confidence 379999999999999988753 233589999997532 222111111000 000 1112221 33 55689999999998
Q ss_pred CCCcccccc-------cCH-------HHHhcCCCCcEEEEcCCCcccCH
Q 019387 245 VLDKTTYHL-------INK-------ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 245 pl~~~t~~l-------i~~-------~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
+.. ...++ .|. +.+....|.+.++|++ ..+|.
T Consensus 76 g~~-~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~ 121 (310)
T 2xxj_A 76 GVA-QRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT--NPVDV 121 (310)
T ss_dssp CCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHH
T ss_pred CCC-CCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec--CchHH
Confidence 653 32222 111 2223336889999984 44444
No 439
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.34 E-value=0.025 Score=49.66 Aligned_cols=102 Identities=11% Similarity=0.116 Sum_probs=62.2
Q ss_pred cCCCeEEEEe-cCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCC--ccccccCCHHHHhhcCC
Q 019387 163 LKGQTVGVIG-AGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLREAD 238 (342)
Q Consensus 163 L~gktvgIvG-~G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ll~~aD 238 (342)
...++|.|.| -|.||+.+++.| ..-| .+|.++++.++...+. ...+... .......+++++++++|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L-~~~G~~~V~~~~R~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQL-ADKQTIKQTLFARQPAKIHKP---------YPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHH-TTCTTEEEEEEESSGGGSCSS---------CCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHH-HhCCCceEEEEEcChhhhccc---------ccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 3468999999 799999999998 5778 8999999886532100 0000000 01112345778899999
Q ss_pred EEEEcCCCCcccccccCHHHHhcCCC-C-cEEEEcCCCcc
Q 019387 239 VISLHPVLDKTTYHLINKERLATMKK-E-AILVNCSRGPV 276 (342)
Q Consensus 239 iV~l~~pl~~~t~~li~~~~l~~mk~-g-a~lINvaRG~~ 276 (342)
+|+.+...... .......+..|++ | ..||+++-...
T Consensus 91 ~vv~~a~~~~~--~~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 91 IVYANLTGEDL--DIQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCSTTH--HHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred EEEEcCCCCch--hHHHHHHHHHHHHcCCCEEEEEeccee
Confidence 99988764321 1112344555532 2 47888876443
No 440
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.33 E-value=0.04 Score=51.77 Aligned_cols=94 Identities=13% Similarity=0.118 Sum_probs=59.7
Q ss_pred CCCeEEEEecCHHHHHH-HHHHH-hcCCcE-EEEEcCCch---hHHHHHHhhhhhhhhccCCCCccccccCC---HHHHh
Q 019387 164 KGQTVGVIGAGRIGSAY-ARMMV-EGFKMN-LIYYDLYQA---TRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVL 234 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~v-A~~l~-~afg~~-V~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~ll 234 (342)
.+++|.|+|.|.||... ++. + +.+|++ |++.+++++ +. +. ...++ ...... ...+ +.++-
T Consensus 172 ~~~~VlV~GaG~vG~~a~iql-a~k~~Ga~~Vi~~~~~~~~~~~~-~~-~~~lG-------a~~v~~-~~~~~~~i~~~~ 240 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAML-KVDDKGYENLYCLGRRDRPDPTI-DI-IEELD-------ATYVDS-RQTPVEDVPDVY 240 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHH-HHCTTCCCEEEEEECCCSSCHHH-HH-HHHTT-------CEEEET-TTSCGGGHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHHHcCCcEEEEEeCCcccHHHH-HH-HHHcC-------CcccCC-CccCHHHHHHhC
Confidence 35899999999999999 887 7 899997 999998765 32 11 11221 111100 1112 22321
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
...|+|+-+... +.+ -...++.++++..++.++-
T Consensus 241 gg~Dvvid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 241 EQMDFIYEATGF-PKH----AIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCCC-hHH----HHHHHHHHhcCCEEEEEeC
Confidence 147999988763 211 2456788899999998874
No 441
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.32 E-value=0.039 Score=52.67 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=46.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcC--CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~af--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~ 241 (342)
-.+|||||.| +|+.-++.+ +.. ++++. ++|+..+. .+++-+.| + +..+.++++++.+.|+++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~-~~~~~~~elvav~~~~~~~-a~~~a~~~-------g-----v~~~~~~~~l~~~~D~v~ 71 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAF-MQPPEGLELVGLLAQGSAR-SRELAHAF-------G-----IPLYTSPEQITGMPDIAC 71 (372)
T ss_dssp CEEEEEECST-TTHHHHHTT-SSCCTTEEEEEEECCSSHH-HHHHHHHT-------T-----CCEESSGGGCCSCCSEEE
T ss_pred CCEEEEEehH-HHHHHHHHH-HhCCCCeEEEEEECCCHHH-HHHHHHHh-------C-----CCEECCHHHHhcCCCEEE
Confidence 4589999999 798777765 344 67877 57887653 33332222 2 224578999999999999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
+++|..
T Consensus 72 i~~p~~ 77 (372)
T 4gmf_A 72 IVVRST 77 (372)
T ss_dssp ECCC--
T ss_pred EECCCc
Confidence 999853
No 442
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.29 E-value=0.066 Score=50.03 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=58.5
Q ss_pred CCCeEEEE-ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----cC
Q 019387 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvgIv-G~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~a 237 (342)
.|++|.|+ |.|.||...++.+ +.+|++|++.++++++. +. ...+ +... .+....++.+.+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~-~~-~~~l-------Ga~~-vi~~~~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIA-KAYGLRVITTASRNETI-EW-TKKM-------GADI-VLNHKESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHH-HHTTCEEEEECCSHHHH-HH-HHHH-------TCSE-EECTTSCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH-HH-HHhc-------CCcE-EEECCccHHHHHHHhCCCCc
Confidence 58999999 7999999999984 89999999999876542 11 1111 1111 1111123333332 47
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
|+|+.|... +. .-...++.++++..+|.++
T Consensus 219 Dvv~d~~g~-~~----~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 219 DYVFCTFNT-DM----YYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEEEESSCH-HH----HHHHHHHHEEEEEEEEESS
T ss_pred cEEEECCCc-hH----HHHHHHHHhccCCEEEEEC
Confidence 888887752 11 1134567788888887764
No 443
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=94.28 E-value=0.048 Score=49.11 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=32.4
Q ss_pred cCCCeEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 163 LKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 163 L~gktvgIvG~---G~IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
+.||++.|.|- |.||+.+|+.|+ ..|++|++.+++.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNES 43 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHH
Confidence 67899999997 699999999985 67999999988764
No 444
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.28 E-value=0.057 Score=50.29 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=61.1
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHHHHhh-----c
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~-----~ 236 (342)
.|++|.|.|. |.||+.+++.+ +..|++|++.+++.+.. +.....+ +.... ......++.+.+. .
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a-~~~G~~V~~~~~~~~~~-~~~~~~~-------g~~~~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLA-KMMGCYVVGSAGSKEKV-DLLKTKF-------GFDDAFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHHHHTS-------CCSEEEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHHc-------CCceEEecCCHHHHHHHHHHHhCCC
Confidence 4889999997 99999999985 78999999999876432 1111011 11100 1111123433332 4
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.+... + .-...+..+++|..++.++-
T Consensus 226 ~d~vi~~~g~-~-----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 226 IDIYFENVGG-K-----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEEESSCH-H-----HHHHHHTTEEEEEEEEECCC
T ss_pred CcEEEECCCH-H-----HHHHHHHHHhcCCEEEEEcc
Confidence 7999988752 1 23556788899999998864
No 445
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.25 E-value=0.043 Score=51.60 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=57.3
Q ss_pred eEEEEecCHHHHHHHHHHHhcC---------CcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhc
Q 019387 167 TVGVIGAGRIGSAYARMMVEGF---------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~af---------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 236 (342)
+|||+|+|.||+.+++.+. .. +++|. ++|++.... . +. +. ....+++++++ +
T Consensus 5 rvgIiG~G~VG~~~~~~l~-~~~~~l~~~g~~~~lvaV~d~~~~~~-~-------------~~-~~-~~~~~d~~~ll-~ 66 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVL-ERAEELSAFGVVPRFLGVLVRDPRKP-R-------------AI-PQ-ELLRAEPFDLL-E 66 (332)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTGGGGGGGTEEEEEEEEECSCTTSC-C-------------SS-CG-GGEESSCCCCT-T
T ss_pred EEEEEcCCHHHHHHHHHHH-hChhhHhhcCCCEEEEEEEECCHHHh-h-------------cc-Cc-ccccCCHHHHh-C
Confidence 7999999999999998863 33 46765 467654321 0 00 00 11345777888 8
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN 289 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~-vd~~aL~~aL~~g 289 (342)
.|+|+.|+|...... .-..+.++.|.-+|...-..+ -.-+.|.++.++.
T Consensus 67 iDvVve~t~~~~~a~----~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPL----RLVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp CSEEEECCCCSHHHH----HHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred CCEEEECCCCcHHHH----HHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 999999988532111 111234555555555322222 2345556555544
No 446
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.24 E-value=0.039 Score=51.39 Aligned_cols=91 Identities=12% Similarity=0.179 Sum_probs=56.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc--ccCCHHHH-hhcCCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEV-LREADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l-l~~aDiV~ 241 (342)
.+++.|+|+|.+|+.+|+.| ...|. |.+.|+.++.. + ... .+......+ ....|+++ +++||.|+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L-~~~g~-v~vid~~~~~~-~-~~~--------~~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRK-K-VLR--------SGANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTG-GGSCE-EEEESCGGGHH-H-HHH--------TTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHH-HhCCc-EEEEeCChhhh-h-HHh--------CCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 56899999999999999997 67888 99999887542 2 111 111111000 11234444 67899999
Q ss_pred EcCCCCcccccccCHHHHhcCCCCcEEE
Q 019387 242 LHPVLDKTTYHLINKERLATMKKEAILV 269 (342)
Q Consensus 242 l~~pl~~~t~~li~~~~l~~mk~ga~lI 269 (342)
++.+.+ ..++.-....+.+.+...+|
T Consensus 183 ~~~~~d--~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 183 VDLESD--SETIHCILGIRKIDESVRII 208 (336)
T ss_dssp ECCSSH--HHHHHHHHHHHTTCTTSEEE
T ss_pred EcCCcc--HHHHHHHHHHHHHCCCCeEE
Confidence 998743 34455555566666653333
No 447
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=94.24 E-value=0.076 Score=48.51 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=34.1
Q ss_pred cccCCCeEEEEecC---HHHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 161 NLLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 161 ~~L~gktvgIvG~G---~IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
..+.||++.|.|-+ .||+.+|+.|+ ..|++|++.+++.+
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la-~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSET 67 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHH-HCCCEEEEEeCChH
Confidence 46899999999986 89999999985 67999999988754
No 448
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.22 E-value=0.14 Score=49.69 Aligned_cols=98 Identities=22% Similarity=0.164 Sum_probs=60.0
Q ss_pred CCCeEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHH--HHhhhhhhhhccCCCCccccccCCHH
Q 019387 164 KGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQPVTWKRASSMD 231 (342)
Q Consensus 164 ~gktvgIvG~G----------~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (342)
.|++|+|+|+. .-...+++.| ...|++|.+|||..+.. .. ....|+ .. ...........++.
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L-~~~g~~v~~~DP~~~~~-~~~~~~~~~~---~~-~~~~~~~~~~~~~~ 385 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEML-IGKGYELRIFDRNVEYA-RVHGANKEYI---ES-KIPHVSSLLVSDLD 385 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECHHHHHH-TTSSSCHHHH---HH-TSHHHHTTBCSCHH
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChh-hccchhhhhc---cc-ccccccccccCCHH
Confidence 68999999997 5678899997 68999999999974321 10 000010 00 00000001235788
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 232 ~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
+.++++|+|+++..- ++-+.+ + .+.|+ +.+++|+ |+
T Consensus 386 ~~~~~~d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~-r~ 421 (436)
T 1mv8_A 386 EVVASSDVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL-VG 421 (436)
T ss_dssp HHHHHCSEEEECSCC-GGGHHH-H---HSCCT-TCEEEES-SS
T ss_pred HHHhCCcEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC-CC
Confidence 899999999999863 222211 1 34566 5788887 44
No 449
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.21 E-value=0.02 Score=52.29 Aligned_cols=74 Identities=20% Similarity=0.144 Sum_probs=45.1
Q ss_pred CeEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvgIvG~-G~IG~~vA~~l~~afg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.+|+|+|+ |.||+.+++.+...-|+++. ++|+.+...... .. ....+....++...+++++++.++|+|+-+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~---d~---~~~~g~~~~~v~~~~dl~~~l~~~DvVIDf 79 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS---DA---GELAGAGKTGVTVQSSLDAVKDDFDVFIDF 79 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC---CT---TCSSSSSCCSCCEESCSTTTTTSCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhh---hH---HHHcCCCcCCceecCCHHHHhcCCCEEEEc
Confidence 48999999 99999999976445678877 677654321000 00 000011111222346788888899999955
Q ss_pred CC
Q 019387 244 PV 245 (342)
Q Consensus 244 ~p 245 (342)
.+
T Consensus 80 t~ 81 (273)
T 1dih_A 80 TR 81 (273)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 450
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.20 E-value=0.14 Score=43.74 Aligned_cols=95 Identities=11% Similarity=0.059 Sum_probs=57.8
Q ss_pred eEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCCEEEEc
Q 019387 167 TVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 167 tvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aDiV~l~ 243 (342)
+|.|.| -|.||+.+++.| ..-|.+|.+.+++++...+. . .+.... ......+ +.+.++|+|+.+
T Consensus 2 kvlVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~-~---------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ 68 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEA-KNRGHEVTAIVRNAGKITQT-H---------KDINILQKDIFDLTL--SDLSDQNVVVDA 68 (221)
T ss_dssp EEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCSHHHHHH-C---------SSSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred eEEEEcCCchhHHHHHHHH-HhCCCEEEEEEcCchhhhhc-c---------CCCeEEeccccChhh--hhhcCCCEEEEC
Confidence 689999 599999999998 46799999999987542110 0 011111 1111112 678899999998
Q ss_pred CCCCccccc---ccCHHHHhcCCC--CcEEEEcCCC
Q 019387 244 PVLDKTTYH---LINKERLATMKK--EAILVNCSRG 274 (342)
Q Consensus 244 ~pl~~~t~~---li~~~~l~~mk~--ga~lINvaRG 274 (342)
......+.. ......+..|++ ...+|+++..
T Consensus 69 ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 69 YGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp CCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 865433211 112345555653 3577777643
No 451
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.16 E-value=0.057 Score=50.71 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=60.4
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCHH----HHhh--
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMD----EVLR-- 235 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~----~ll~-- 235 (342)
.|++|.|.|. |.||+.+++.+ +..|++|++.+++++... ....+ +.... ... ..++. +...
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~~-------ga~~~~d~~-~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIA-RAYGLKILGTAGTEEGQK--IVLQN-------GAHEVFNHR-EVNYIDKIKKYVGEK 238 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHHHH--HHHHT-------TCSEEEETT-STTHHHHHHHHHCTT
T ss_pred CcCEEEEECCCChHHHHHHHHH-HHCCCEEEEEeCChhHHH--HHHHc-------CCCEEEeCC-CchHHHHHHHHcCCC
Confidence 4889999998 99999999985 789999999998765432 11111 11100 011 11222 2222
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG 274 (342)
..|+|+.+... . .+ ...++.++++..+|.++..
T Consensus 239 ~~D~vi~~~G~--~---~~-~~~~~~l~~~G~iv~~g~~ 271 (351)
T 1yb5_A 239 GIDIIIEMLAN--V---NL-SKDLSLLSHGGRVIVVGSR 271 (351)
T ss_dssp CEEEEEESCHH--H---HH-HHHHHHEEEEEEEEECCCC
T ss_pred CcEEEEECCCh--H---HH-HHHHHhccCCCEEEEEecC
Confidence 57999888752 1 12 4567888999999988743
No 452
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.16 E-value=0.22 Score=44.69 Aligned_cols=36 Identities=19% Similarity=0.275 Sum_probs=31.8
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCC
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~ 198 (342)
.+.||++.|.|- |.||+.+|+.|+ .-|++|++.++.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLA-EEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEccc
Confidence 588999999996 589999999985 779999999876
No 453
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.12 E-value=0.064 Score=50.03 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=58.0
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHH----HHhh--c
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD----EVLR--E 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~ll~--~ 236 (342)
.|++|.|+|.|.+|...++. ++.+ |.+|++.++++++... ...+ +.... +....++. ++.. .
T Consensus 171 ~g~~vlv~GaG~vG~~a~ql-a~~~g~~~Vi~~~~~~~~~~~--~~~l-------Ga~~~-i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQI-LRAVSAARVIAVDLDDDRLAL--AREV-------GADAA-VKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHCCCEEEEEESCHHHHHH--HHHT-------TCSEE-EECSTTHHHHHHHHHGGGC
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEEcCCHHHHHH--HHHc-------CCCEE-EcCCCcHHHHHHHHhCCCC
Confidence 48899999999999999998 4777 7899999987754311 1111 21111 11111222 2222 5
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
.|+|+-+.... . .-...++.++++..++.++
T Consensus 240 ~d~v~d~~G~~-~----~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFVGAQ-S----TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESSCCH-H----HHHHHHHHEEEEEEEEECS
T ss_pred CeEEEECCCCH-H----HHHHHHHHHhcCCEEEEEC
Confidence 89999888642 1 1234566777777777775
No 454
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.07 E-value=0.076 Score=49.25 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCCH----HHHh--h
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSM----DEVL--R 235 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l----~~ll--~ 235 (342)
.|++|.|.|. |.||+.+++.+ +..|++|++.+++.+.. +.. ..+ +.... ... ..++ .+.. .
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~Vi~~~~~~~~~-~~~-~~~-------g~~~~~d~~-~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWA-RHLGATVIGTVSTEEKA-ETA-RKL-------GCHHTINYS-TQDFAEVVREITGGK 213 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHH-HHTTCEEEEEESSHHHH-HHH-HHH-------TCSEEEETT-TSCHHHHHHHHHTTC
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH-HHc-------CCCEEEECC-CHHHHHHHHHHhCCC
Confidence 4889999995 99999999985 78999999999876432 111 111 11100 010 1122 2222 2
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
..|+++.+... -.-...++.++++..+|.++-
T Consensus 214 ~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 214 GVDVVYDSIGK------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp CEEEEEECSCT------TTHHHHHHTEEEEEEEEECCC
T ss_pred CCeEEEECCcH------HHHHHHHHhhccCCEEEEEec
Confidence 47999988763 123567788889989998874
No 455
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.05 E-value=0.2 Score=42.97 Aligned_cols=95 Identities=12% Similarity=0.057 Sum_probs=57.3
Q ss_pred eEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCCEEEEc
Q 019387 167 TVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 167 tvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aDiV~l~ 243 (342)
+|.|.|- |.||+.+++.|+ .-|.+|++.++++....+. . ..+.... ......+ +.+.++|+|+.+
T Consensus 2 kilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~-~--------~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ 69 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEAR-RRGHEVLAVVRDPQKAADR-L--------GATVATLVKEPLVLTE--ADLDSVDAVVDA 69 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHH-T--------CTTSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred EEEEEcCCCHHHHHHHHHHH-HCCCEEEEEEecccccccc-c--------CCCceEEecccccccH--hhcccCCEEEEC
Confidence 6889997 999999999984 6699999999886542111 0 0011111 1111112 678899999988
Q ss_pred CCCC--cc---cccccCHHHHhcCC-CCcEEEEcCC
Q 019387 244 PVLD--KT---TYHLINKERLATMK-KEAILVNCSR 273 (342)
Q Consensus 244 ~pl~--~~---t~~li~~~~l~~mk-~ga~lINvaR 273 (342)
.... +. ..-......+..|+ .|..+|+++.
T Consensus 70 ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 70 LSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp CCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 7653 11 11111244566665 3567888764
No 456
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.01 E-value=0.13 Score=49.89 Aligned_cols=119 Identities=18% Similarity=0.279 Sum_probs=69.3
Q ss_pred cccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCc---------hhHHHHHHhhhhh--h--hhccCCCCccccc
Q 019387 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQ---------ATRLEKFVTAYGQ--F--LKANGEQPVTWKR 226 (342)
Q Consensus 161 ~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~-~d~~~---------~~~~~~~~~~~~~--~--~~~~~~~~~~~~~ 226 (342)
.++.|++|.|.|+|++|+.+|+.| ..+|++|++ .|.+. ...+..+.+..+. + +...+. . ..
T Consensus 206 ~~l~gk~vaVqG~GnVG~~aa~~L-~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~-~---~~ 280 (421)
T 1v9l_A 206 GGIEGKTVAIQGMGNVGRWTAYWL-EKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDN-A---EF 280 (421)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSC-C---CC
T ss_pred CCcCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccC-c---eE
Confidence 478999999999999999999997 689999984 44421 1111111111110 0 000000 0 01
Q ss_pred cCCHHHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 227 ASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 227 ~~~l~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
..+-++++ ..||+++-|.- .+.|+.+....++- .+++--+-+++ ..++ .+.|.+..+.
T Consensus 281 ~~~~~~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~a-k~V~EgAN~p~-t~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 281 VKNPDAIFKLDVDIFVPAAI-----ENVIRGDNAGLVKA-RLVVEGANGPT-TPEA-ERILYERGVV 339 (421)
T ss_dssp CSSTTGGGGCCCSEEEECSC-----SSCBCTTTTTTCCC-SEEECCSSSCB-CHHH-HHHHHTTTCE
T ss_pred eCCchhhhcCCccEEEecCc-----CCccchhhHHHcCc-eEEEecCCCcC-CHHH-HHHHHHCCCE
Confidence 10223333 47999998863 45666666666753 47777888886 4444 3566666554
No 457
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.98 E-value=0.12 Score=44.54 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=47.5
Q ss_pred eEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccc-cCCHHHHhhcCCEEEE
Q 019387 167 TVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKR-ASSMDEVLREADVISL 242 (342)
Q Consensus 167 tvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~l~~ll~~aDiV~l 242 (342)
+|.|.| -|.||+.+++.| ..-|.+|++.++++...... .+.... .... ..++.+++.+.|+|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSL-STTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHH-TTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence 688999 899999999998 57799999999987532100 000000 1111 2356677889999998
Q ss_pred cCCCCc
Q 019387 243 HPVLDK 248 (342)
Q Consensus 243 ~~pl~~ 248 (342)
+.....
T Consensus 70 ~ag~~~ 75 (219)
T 3dqp_A 70 VSGSGG 75 (219)
T ss_dssp CCCCTT
T ss_pred CCcCCC
Confidence 887554
No 458
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=93.92 E-value=0.13 Score=46.39 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=32.9
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
.+.||++.|.|- |.||+.+|+.|+ ..|++|++.++..+
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFH-REGAQLAFTYATPK 58 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHH
Confidence 378999999997 599999999985 67999999988763
No 459
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.91 E-value=0.089 Score=51.39 Aligned_cols=107 Identities=12% Similarity=0.145 Sum_probs=62.1
Q ss_pred CeEEEEecCHHHHHHHHHHHh---------cCCcEEEE-EcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh
Q 019387 166 QTVGVIGAGRIGSAYARMMVE---------GFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~---------afg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~ 235 (342)
-+|||+|+|.||+.+++.|.+ +.+.+|.+ +|+++... ..+. . ....+.++++++.
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~~~~----------~----~~~~~~d~~ell~ 75 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-EALA----------G----GLPLTTNPFDVVD 75 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-HHHH----------T----TCCEESCTHHHHT
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-hhhc----------c----cCcccCCHHHHhc
Confidence 489999999999999876531 25677764 67765432 2110 0 1123468899986
Q ss_pred --cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccC-HHHHHHHHHcCCc
Q 019387 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID-EVALVEHLKQNPM 291 (342)
Q Consensus 236 --~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd-~~aL~~aL~~g~i 291 (342)
+.|+|+.|+|.+..... -....++.|.-++-.--+.+.. -+.|.++.++.+.
T Consensus 76 d~diDvVve~tp~~~~h~~----~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv 130 (444)
T 3mtj_A 76 DPEIDIVVELIGGLEPARE----LVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGV 130 (444)
T ss_dssp CTTCCEEEECCCSSTTHHH----HHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEcCCCchHHHH----HHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCC
Confidence 47999999985211111 1234555666666443322222 2566666655433
No 460
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.89 E-value=0.32 Score=47.40 Aligned_cols=122 Identities=16% Similarity=0.102 Sum_probs=69.5
Q ss_pred ccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC-------ch--hHHHHH---Hhhhhhhhhc--cCCCCccc
Q 019387 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY-------QA--TRLEKF---VTAYGQFLKA--NGEQPVTW 224 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~-------~~--~~~~~~---~~~~~~~~~~--~~~~~~~~ 224 (342)
|.++.|+||.|-|+|++|+.+|+.| ...|++|+ +.|.+ .- ..+... .+.....+.. ......
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a-- 310 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKL-IEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTA-- 310 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHH-HHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSC--
T ss_pred CCCccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCc--
Confidence 3568999999999999999999997 57899986 45532 10 111110 0000000000 000011
Q ss_pred cccCCHHHH-hhcCCEEEEcCCCCcccccccCHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 225 KRASSMDEV-LREADVISLHPVLDKTTYHLINKERLATMK--KEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 225 ~~~~~l~~l-l~~aDiV~l~~pl~~~t~~li~~~~l~~mk--~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
... +-+++ -..||+++-|.- .+.|+.+....+. +=.+++--+-+++-.+. .+.|.+..|.
T Consensus 311 ~~v-~~~~i~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA--~~iL~~rGI~ 373 (456)
T 3r3j_A 311 KYF-ENQKPWNIPCDIAFPCAT-----QNEINENDADLFIQNKCKMIVEGANMPTHIKA--LHKLKQNNII 373 (456)
T ss_dssp EEE-CSCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHHTCCEEECCSSSCBCTTH--HHHHHTTTCE
T ss_pred eEe-CCccccccCccEEEeCCC-----ccchhhHHHHHHHhcCCeEEEecCCCCCCHHH--HHHHHHCCCE
Confidence 111 11222 246999987753 5788888777762 23477778888865443 3677665553
No 461
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=93.88 E-value=0.084 Score=48.72 Aligned_cols=108 Identities=17% Similarity=0.113 Sum_probs=62.9
Q ss_pred cCCC-eEEEEec-CHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh--c-
Q 019387 163 LKGQ-TVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E- 236 (342)
Q Consensus 163 L~gk-tvgIvG~-G~IG~~vA~~l~~afg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~- 236 (342)
+.-+ ++.|+|. |++|+.+++.+ ...|.+ |..++|..... ...+...+.+++++.. .
T Consensus 10 ~~~~~~vvV~Gasg~~G~~~~~~l-~~~g~~~v~~VnP~~~g~-----------------~i~G~~vy~sl~el~~~~~~ 71 (297)
T 2yv2_A 10 VDSETRVLVQGITGREGSFHAKAM-LEYGTKVVAGVTPGKGGS-----------------EVHGVPVYDSVKEALAEHPE 71 (297)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHCTT
T ss_pred hCCCCEEEEECCCCCHHHHHHHHH-HhCCCcEEEEeCCCCCCc-----------------eECCEeeeCCHHHHhhcCCC
Confidence 3334 4677798 99999999987 556887 33566542100 0123345678999987 5
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCce
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPMF 292 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~-~vd~~aL~~aL~~g~i~ 292 (342)
.|++++++|- +.+...+.+ ..++ +.. .+|..+-|= .-+++.|.++.++..+.
T Consensus 72 ~DvaIi~vp~-~~~~~~v~e-a~~~-Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 72 INTSIVFVPA-PFAPDAVYE-AVDA-GIR-LVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp CCEEEECCCG-GGHHHHHHH-HHHT-TCS-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEecCH-HHHHHHHHH-HHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 9999999983 233333322 2222 222 144444442 12456788888765553
No 462
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=93.85 E-value=0.069 Score=52.02 Aligned_cols=98 Identities=18% Similarity=0.112 Sum_probs=57.0
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhccCCCCc
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQPV 222 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 222 (342)
.|.+++|.|||.|.+|.++|+.|+ ..|. ++..+|...- .+.+...+........-.....
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La-~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~ 115 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLA-LSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH 115 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHH-HTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred HhcCCEEEEECcCHHHHHHHHHHH-HcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEE
Confidence 458999999999999999999985 5576 6777764320 0111111111010000000000
Q ss_pred cccccCCHHHHhhcCCEEEEcCCCCcccccccCHHHHhc
Q 019387 223 TWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 223 ~~~~~~~l~~ll~~aDiV~l~~pl~~~t~~li~~~~l~~ 261 (342)
...-.....++++++|+|+.|+. +.+++..+|......
T Consensus 116 ~~~i~~~~~~~~~~~DlVi~~~D-n~~~R~~in~~c~~~ 153 (434)
T 1tt5_B 116 FNKIQDFNDTFYRQFHIIVCGLD-SIIARRWINGMLISL 153 (434)
T ss_dssp ESCGGGBCHHHHTTCSEEEECCS-CHHHHHHHHHHHHHT
T ss_pred ecccchhhHHHhcCCCEEEECCC-CHHHHHHHHHHHHHh
Confidence 00000112578899999999975 678888888876553
No 463
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.78 E-value=0.13 Score=43.31 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=48.4
Q ss_pred CCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCCEEE
Q 019387 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aDiV~ 241 (342)
+++|.|.|- |.||+.+++.|+ .-|.+|++.++++..... ....+.... ......++.++++++|+|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAV-QAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeChhhccc---------ccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 478999998 999999999984 669999999987653100 000010000 1112235678889999999
Q ss_pred EcCCCC
Q 019387 242 LHPVLD 247 (342)
Q Consensus 242 l~~pl~ 247 (342)
.+....
T Consensus 73 ~~a~~~ 78 (206)
T 1hdo_A 73 VLLGTR 78 (206)
T ss_dssp ECCCCT
T ss_pred ECccCC
Confidence 887643
No 464
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.78 E-value=0.072 Score=49.92 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=63.2
Q ss_pred CeEEEEecCHHHHHHHHHHHhc-----C--CcEEE-EEcCCchhHHH-----HHHhhhhhhhhccCCCCccccccC---C
Q 019387 166 QTVGVIGAGRIGSAYARMMVEG-----F--KMNLI-YYDLYQATRLE-----KFVTAYGQFLKANGEQPVTWKRAS---S 229 (342)
Q Consensus 166 ktvgIvG~G~IG~~vA~~l~~a-----f--g~~V~-~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~ 229 (342)
-+|||+|+|.||+.+++.+.+. . +++|. ++|+++....+ .+.+.+ .. + ... ...+ +
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~----~~-~--~~~-~~~~~~~d 78 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYK----EK-G--SLD-SLEYESIS 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHH----HT-T--CGG-GCCSEECC
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhh----cc-C--Ccc-cccCCCCC
Confidence 3799999999999999887421 1 46765 46766532111 011100 00 0 000 0123 7
Q ss_pred HHHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCC
Q 019387 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNP 290 (342)
Q Consensus 230 l~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~v-d~~aL~~aL~~g~ 290 (342)
+++++ .+.|+|+.|+|.. .|-..--+-....++.|.-+|...-+.+. .-+.|.++.++..
T Consensus 79 ~~~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~g 140 (331)
T 3c8m_A 79 ASEALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNN 140 (331)
T ss_dssp HHHHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcC
Confidence 88887 3589999999964 22122222345566677777765433332 2345665554443
No 465
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=93.74 E-value=0.044 Score=51.82 Aligned_cols=30 Identities=20% Similarity=0.440 Sum_probs=23.8
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEEE
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYY 195 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~~ 195 (342)
.+|||+| .|.||+.+.+.|...=.+++.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai 35 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKV 35 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEE
Confidence 4799999 99999999998743235677766
No 466
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.74 E-value=0.084 Score=49.48 Aligned_cols=92 Identities=17% Similarity=0.185 Sum_probs=59.1
Q ss_pred CeEEEEec-CHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhccCCCCcccc-ccCCHHHHhh-----cC
Q 019387 166 QTVGVIGA-GRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-RASSMDEVLR-----EA 237 (342)
Q Consensus 166 ktvgIvG~-G~IG~~vA~~l~~afg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~-----~a 237 (342)
++|.|.|. |.||+.+++.+ +..|+ +|++.+++.+.. +.....+ +... ... ...++.+.+. ..
T Consensus 162 ~~vlI~GasggiG~~~~~~a-~~~Ga~~Vi~~~~~~~~~-~~~~~~~-------g~~~-~~d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIG-HFLGCSRVVGICGTHEKC-ILLTSEL-------GFDA-AINYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHH-HHTTCSEEEEEESCHHHH-HHHHHTS-------CCSE-EEETTTSCHHHHHHHHCTTCE
T ss_pred cEEEEECCCcHHHHHHHHHH-HHCCCCeEEEEeCCHHHH-HHHHHHc-------CCce-EEecCchHHHHHHHHhcCCCC
Confidence 89999998 99999999985 78999 999999876432 2111111 1110 011 1123333332 47
Q ss_pred CEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
|+++.|... + .-...+..+++|..+|.++-
T Consensus 232 d~vi~~~G~--~----~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 232 DVYFDNVGG--N----ISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEEESCCH--H----HHHHHHHTEEEEEEEEECCC
T ss_pred CEEEECCCH--H----HHHHHHHHhccCcEEEEECC
Confidence 999888752 1 23566788899989988864
No 467
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.73 E-value=0.59 Score=45.89 Aligned_cols=113 Identities=14% Similarity=0.102 Sum_probs=70.0
Q ss_pred ccCCCeEEEEec----------CHHHHHHHHHHHhcCCcEEEEEcCCchhHH--HHHHhhhhhhhhccCCCCccccccCC
Q 019387 162 LLKGQTVGVIGA----------GRIGSAYARMMVEGFKMNLIYYDLYQATRL--EKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 162 ~L~gktvgIvG~----------G~IG~~vA~~l~~afg~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
.+.|++|+|+|+ ..-...+++.| ...|++|.+|||...... +.....+.... ....+....+
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 405 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHL-MEEHAKLSVYDPKVQKSQMLNDLASVTSAQD-----VERLITVESD 405 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHHHHHHHHHSCHHH-----HHHHEEEESS
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHH-HHCCCEEEEECCCCCchhhHHHHHhhhcccc-----ccCceeecCC
Confidence 478999999997 45678889987 688999999999864311 11110000000 0000122357
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHHH-HhcCCCCcEEEEcCCCcccCHHHHHH
Q 019387 230 MDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGPVIDEVALVE 284 (342)
Q Consensus 230 l~~ll~~aDiV~l~~pl~~~t~~li~~~~-l~~mk~ga~lINvaRG~~vd~~aL~~ 284 (342)
+.+.++++|.|++++.- ++-+. ++.+. .+.|+...+++|. |+ ++|.+.+.+
T Consensus 406 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~~ 457 (481)
T 2o3j_A 406 PYAAARGAHAIVVLTEW-DEFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKALRE 457 (481)
T ss_dssp HHHHHTTCSEEEECSCC-GGGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHHHH
T ss_pred HHHHHcCCCEEEEcCCc-HHhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHHHh
Confidence 78889999999999863 33332 35444 4467776688887 55 467665443
No 468
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.72 E-value=0.075 Score=52.13 Aligned_cols=74 Identities=16% Similarity=0.288 Sum_probs=47.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhh-hhccCCCCccccccCCHHHH-hhcCCEEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF-LKANGEQPVTWKRASSMDEV-LREADVISL 242 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l-l~~aDiV~l 242 (342)
..+|-|+|+|.+|+.+|+.| ..-|.+|++.|..++. .+...+.++-. +..++ .....|+++ +++||.++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L-~~~~~~v~vId~d~~~-~~~~~~~~~~~~i~Gd~------~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENL-VGENNDITIVDKDGDR-LRELQDKYDLRVVNGHA------SHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHT-CSTTEEEEEEESCHHH-HHHHHHHSSCEEEESCT------TCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHH-HHHHHHhcCcEEEEEcC------CCHHHHHhcCCCcCCEEEE
Confidence 35799999999999999997 6889999999998753 33322222100 00000 011234443 688999988
Q ss_pred cCCC
Q 019387 243 HPVL 246 (342)
Q Consensus 243 ~~pl 246 (342)
+.+.
T Consensus 75 ~t~~ 78 (461)
T 4g65_A 75 VTNT 78 (461)
T ss_dssp CCSC
T ss_pred EcCC
Confidence 7764
No 469
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.68 E-value=0.09 Score=49.81 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=45.2
Q ss_pred CeEEEEe-cCHHHHH-HH----HHHHhcCCcEE----------EEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCC
Q 019387 166 QTVGVIG-AGRIGSA-YA----RMMVEGFKMNL----------IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 166 ktvgIvG-~G~IG~~-vA----~~l~~afg~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
.+||||| +|.||+. .+ +.+.+.-+..+ .++|+.++.. +.+.+.| +.. ..+.+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a-~~~a~~~-------~~~----~~~~~ 74 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKV-EALAKRF-------NIA----RWTTD 74 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHH-HHHHHHT-------TCC----CEESC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHH-HHHHHHh-------CCC----cccCC
Confidence 3799999 9999998 55 55432223332 4788887542 2222222 111 13579
Q ss_pred HHHHhhc--CCEEEEcCCCC
Q 019387 230 MDEVLRE--ADVISLHPVLD 247 (342)
Q Consensus 230 l~~ll~~--aDiV~l~~pl~ 247 (342)
+++++.+ .|+|++|.|..
T Consensus 75 ~~~ll~~~~iD~V~i~tp~~ 94 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATTQ 94 (383)
T ss_dssp HHHHHHCSSCCEEEECSCSS
T ss_pred HHHHhcCCCCCEEEECCCch
Confidence 9999976 89999999853
No 470
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=93.65 E-value=0.14 Score=45.74 Aligned_cols=37 Identities=24% Similarity=0.202 Sum_probs=30.6
Q ss_pred ccCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEE-cCCc
Q 019387 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYY-DLYQ 199 (342)
Q Consensus 162 ~L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~-d~~~ 199 (342)
.+.||++.|.|- |.||+++|+.|+ .-|++|++. ++..
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~ 43 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAA 43 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCH
Confidence 578999999986 589999999985 679999987 4443
No 471
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.63 E-value=0.082 Score=45.63 Aligned_cols=71 Identities=14% Similarity=0.013 Sum_probs=47.9
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCC--CccccccCCHHHHhhcCCEEEE
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ll~~aDiV~l 242 (342)
++|.|.| -|.||+.+++.| ..-|.+|++.++.+.... .. ..+.. ........+++++++++|+|+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~-~~---------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEA-LNRGFEVTAVVRHPEKIK-IE---------NEHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHH-HTTTCEEEEECSCGGGCC-CC---------CTTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHH-HHCCCEEEEEEcCcccch-hc---------cCceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 6899999 599999999998 477999999999865321 00 00000 0111123457788999999998
Q ss_pred cCCCC
Q 019387 243 HPVLD 247 (342)
Q Consensus 243 ~~pl~ 247 (342)
+....
T Consensus 74 ~a~~~ 78 (227)
T 3dhn_A 74 AFNPG 78 (227)
T ss_dssp CCCC-
T ss_pred eCcCC
Confidence 87644
No 472
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.59 E-value=0.28 Score=46.29 Aligned_cols=94 Identities=14% Similarity=0.033 Sum_probs=57.1
Q ss_pred cCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----c
Q 019387 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (342)
Q Consensus 163 L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~ 236 (342)
-.|++|.|+|. |.+|...++. ++.+|++|++.. ++++ .+ +...+ +....-.....++.+.+. .
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~ql-a~~~Ga~Vi~~~-~~~~-~~-~~~~l-------Ga~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQM-LRLSGYIPIATC-SPHN-FD-LAKSR-------GAEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHH-HHHTTCEEEEEE-CGGG-HH-HHHHT-------TCSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHH-HHHCCCEEEEEe-CHHH-HH-HHHHc-------CCcEEEECCCchHHHHHHHHccCC
Confidence 36899999999 8999999998 589999998875 3332 22 21222 211110001123333322 3
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcC-CCCcEEEEcC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~m-k~ga~lINva 272 (342)
.|+++-|+.. +.+ -...+..+ ++|..++.++
T Consensus 232 ~d~v~d~~g~-~~~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCITN-VES----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSCS-HHH----HHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCCc-hHH----HHHHHHHhhcCCCEEEEEe
Confidence 7999988863 111 23456677 6788888876
No 473
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.59 E-value=0.14 Score=46.59 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=32.5
Q ss_pred ccCCCeEEEEecC-H--HHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 162 LLKGQTVGVIGAG-R--IGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~L~gktvgIvG~G-~--IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
.+.||++.|.|-+ . ||+++|+.|+ ..|++|++.++...
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la-~~G~~V~~~~r~~~ 68 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGDA 68 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 5899999999984 4 9999999985 67999999988753
No 474
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=93.57 E-value=2.5 Score=39.85 Aligned_cols=115 Identities=11% Similarity=0.170 Sum_probs=68.2
Q ss_pred cccCCCeEEEEec-------CHHHHHHHHHHHhcCCcEEEEEcCCchhH-HHHHHhhhhhhhhccCCCCccccccCCHHH
Q 019387 161 NLLKGQTVGVIGA-------GRIGSAYARMMVEGFKMNLIYYDLYQATR-LEKFVTAYGQFLKANGEQPVTWKRASSMDE 232 (342)
Q Consensus 161 ~~L~gktvgIvG~-------G~IG~~vA~~l~~afg~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (342)
.++.|++++++|- .++.++....+ ..||++|.+.-|.+.-. .+.+.+.....+...+ ..+....++++
T Consensus 186 ~dl~g~kv~~~~~~~gd~~~~~Va~S~~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g---~~i~~~~d~~e 261 (359)
T 3kzn_A 186 PDLRGKKYVLTWTYHPKPLNTAVANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG---GSLQVSHDIDS 261 (359)
T ss_dssp SCCTTCEEEEEECCCSSCCCSHHHHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS---CEEEEECCHHH
T ss_pred ccccCCeEEEEEeecCCccccchhhhhHHHH-HhccccEEEEecccccCCCHHHHHHHHHHHHhhC---CCcccccCHHH
Confidence 3588999999976 36888888886 68999999988753211 1111110000011111 12334578999
Q ss_pred HhhcCCEEEEcCCCCcc---------------cccccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 019387 233 VLREADVISLHPVLDKT---------------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 233 ll~~aDiV~l~~pl~~~---------------t~~li~~~~l~~mk~ga~lINva---RG~~vd~~ 280 (342)
+++++|+|..-.-.... ....++++.++ ++++++|.-+. ||.=|+.+
T Consensus 262 av~~aDvvyt~r~q~~r~~~~~~~~~~~~~~~~~y~v~~~l~~-~~~~ai~MHplP~~Rg~EI~~e 326 (359)
T 3kzn_A 262 AYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMA-LTNNGVFSHCLPLRRNVKATDA 326 (359)
T ss_dssp HHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHH-TSSSCEEECCSCCCBTTTBCHH
T ss_pred HhcCCeEEEEEEEEEeecccchhhhHHHHHHHhccChHHHHhc-CCCCCEEECCCCCCCCCCcCHH
Confidence 99999999765433221 01235666655 55677777655 77655544
No 475
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.55 E-value=0.15 Score=46.13 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=48.1
Q ss_pred CCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhH----HHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcC
Q 019387 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATR----LEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (342)
Q Consensus 165 gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~a 237 (342)
.++|.|.|- |.||+.+++.|+ .-|.+|++.+|..... .......+ ...+.... ......++.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~~~l----~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASL-DLGHPTFLLVRESTASSNSEKAQLLESF----KASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HTTCCEEEECCCCCTTTTHHHHHHHHHH----HTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-hCCCCEEEEECCcccccCHHHHHHHHHH----HhCCCEEEEeccCCHHHHHHHHcCC
Confidence 468999996 999999999984 6689999998874311 00000000 01111111 111234677889999
Q ss_pred CEEEEcCCC
Q 019387 238 DVISLHPVL 246 (342)
Q Consensus 238 DiV~l~~pl 246 (342)
|+|+.+.+.
T Consensus 79 d~vi~~a~~ 87 (308)
T 1qyc_A 79 DVVISTVGS 87 (308)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCcc
Confidence 999988764
No 476
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.55 E-value=0.08 Score=49.81 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=54.6
Q ss_pred CeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCc--hhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 166 ktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
.+|+|+| .|.+|+.+.++|...=+.++..+..+. +.......+.+..+ . +.....+....+.++++.++|+|++
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~-~--~~~~~~v~~~~~~~~~~~~~Dvvf~ 81 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQL-K--GIVELPLQPMSDISEFSPGVDVVFL 81 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGG-T--TTCCCBEEEESSGGGTCTTCSEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccc-c--CccceeEeccCCHHHHhcCCCEEEE
Confidence 4899999 699999999998533456777653322 01001111111111 0 1111111111034455589999999
Q ss_pred cCCCCcccccccCHHHHh-cCCCCcEEEEcCCCc
Q 019387 243 HPVLDKTTYHLINKERLA-TMKKEAILVNCSRGP 275 (342)
Q Consensus 243 ~~pl~~~t~~li~~~~l~-~mk~ga~lINvaRG~ 275 (342)
|+|.. ...+... ..+.|+.+|+.+-.-
T Consensus 82 a~p~~------~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 82 ATAHE------VSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp CSCHH------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred CCChH------HHHHHHHHHHHCCCEEEEcCCcc
Confidence 99831 2222222 246799999987543
No 477
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.41 E-value=0.16 Score=44.17 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=48.8
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcC--CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC--ccccccCCHHHHhhcCC
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLREAD 238 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~af--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ll~~aD 238 (342)
.+++|.|.| -|.||+.+++.|+ .- |.+|++.++++... +.. ...... .......++++++++.|
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~-~~~~g~~V~~~~r~~~~~-~~~---------~~~~~~~~~D~~d~~~~~~~~~~~d 71 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLK-EGSDKFVAKGLVRSAQGK-EKI---------GGEADVFIGDITDADSINPAFQGID 71 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHH-HTTTTCEEEEEESCHHHH-HHT---------TCCTTEEECCTTSHHHHHHHHTTCS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-hcCCCcEEEEEEcCCCch-hhc---------CCCeeEEEecCCCHHHHHHHHcCCC
Confidence 578999999 6999999999985 55 89999999876432 110 001110 11112246778889999
Q ss_pred EEEEcCCC
Q 019387 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~~pl 246 (342)
+|+.+...
T Consensus 72 ~vi~~a~~ 79 (253)
T 1xq6_A 72 ALVILTSA 79 (253)
T ss_dssp EEEECCCC
T ss_pred EEEEeccc
Confidence 99988754
No 478
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.34 E-value=0.15 Score=49.35 Aligned_cols=94 Identities=20% Similarity=0.188 Sum_probs=60.2
Q ss_pred CCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccc---------------
Q 019387 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR--------------- 226 (342)
Q Consensus 164 ~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------- 226 (342)
.|++|.|.|. |.||..+++.+ +..|++|++.+++.++. +. ...+ +.... ....
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla-~~~Ga~vi~~~~~~~~~-~~-~~~l-------Ga~~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFV-KNGGGIPVAVVSSAQKE-AA-VRAL-------GCDLVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HH-HHHT-------TCCCEEEHHHHTCCTTGGGCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH-HH-HHhc-------CCCEEEecccccccccccccccccc
Confidence 5899999998 99999999984 89999999988765432 21 1111 11110 0000
Q ss_pred ------cCCHHHHh-hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 227 ------ASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 227 ------~~~l~~ll-~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
...+.++. ...|+|+.+... . .-...+..+++|..+|+++-
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTGR--V----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSCH--H----HHHHHHHHSCTTCEEEESCC
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCCc--h----HHHHHHHHHhcCCEEEEEec
Confidence 01112222 258999988763 1 12566788999999999873
No 479
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.31 E-value=0.091 Score=50.99 Aligned_cols=115 Identities=17% Similarity=0.126 Sum_probs=70.6
Q ss_pred cCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEE
Q 019387 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l 242 (342)
+.||+|.|||+|..|.+.|+.| ...|.+|.++|.+....... .+. .+..-. . .... .+.+..+|.|++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l-~~~G~~v~~~D~~~~~~~~~-------~l~-~G~~~~-~-g~~~-~~~~~~~d~vV~ 70 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFF-LARGVTPRVMDTRMTPPGLD-------KLP-EAVERH-T-GSLN-DEWLMAADLIVA 70 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHH-HTTTCCCEEEESSSSCTTGG-------GSC-TTSCEE-E-SSCC-HHHHHTCSEEEE
T ss_pred CCCCEEEEEeecHHHHHHHHHH-HhCCCEEEEEECCCCcchhH-------Hhh-CCCEEE-E-CCCc-HHHhccCCEEEe
Confidence 5689999999999999999987 68899999999875432111 111 222111 0 1112 455668999988
Q ss_pred cCCCC---cc-------cccccCHH--HHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 019387 243 HPVLD---KT-------TYHLINKE--RLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 243 ~~pl~---~~-------t~~li~~~--~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g 289 (342)
..... |. +..++.+. ....++...+-|-=+.|..-...-|...|++.
T Consensus 71 s~gi~~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 71 SPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp CTTSCTTCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 74332 22 11234432 11234545667777788887777666777653
No 480
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=93.30 E-value=0.22 Score=44.88 Aligned_cols=40 Identities=20% Similarity=0.136 Sum_probs=33.3
Q ss_pred cccCCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 019387 161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~L~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~ 201 (342)
..+.||++.|.| -|.||+.+|+.|+ .-|++|++.+++...
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTE 65 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchH
Confidence 457899999887 5789999999985 679999998887644
No 481
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=93.27 E-value=0.42 Score=50.07 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=74.9
Q ss_pred cCCCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------h
Q 019387 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------R 235 (342)
Q Consensus 163 L~gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~ 235 (342)
-.|++|.|.|. |.+|+...+. ++.+|++|++.+...+.. . .. -+....-.....++.+.+ .
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiql-Ak~~Ga~V~~t~~~~k~~--~--------l~-lga~~v~~~~~~~~~~~i~~~t~g~ 411 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQL-ARHLGAEVYATASEDKWQ--A--------VE-LSREHLASSRTCDFEQQFLGATGGR 411 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHH-HHHTTCCEEEECCGGGGG--G--------SC-SCGGGEECSSSSTHHHHHHHHSCSS
T ss_pred CCCCEEEEecCCCHHHHHHHHH-HHHcCCEEEEEeChHHhh--h--------hh-cChhheeecCChhHHHHHHHHcCCC
Confidence 36899999996 9999999998 589999999987554211 0 00 011100001122444333 2
Q ss_pred cCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEEecCC
Q 019387 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 236 ~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~~aaLDV~~ 300 (342)
..|+|+.++.. + .-...++.++++..||.++.....+...+.... ..+....+|...
T Consensus 412 GvDvVld~~gg--~----~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~~~~--~~~~~~~~~l~~ 468 (795)
T 3slk_A 412 GVDVVLNSLAG--E----FADASLRMLPRGGRFLELGKTDVRDPVEVADAH--PGVSYQAFDTVE 468 (795)
T ss_dssp CCSEEEECCCT--T----TTHHHHTSCTTCEEEEECCSTTCCCHHHHHHHS--SSEEEEECCGGG
T ss_pred CeEEEEECCCc--H----HHHHHHHHhcCCCEEEEeccccccCcccccccC--CCCEEEEeeccc
Confidence 58999998753 2 237789999999999999977665555443322 345555666543
No 482
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.24 E-value=0.12 Score=48.14 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=63.3
Q ss_pred CCCeEEEEecC-HHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc-cccccCC----HHHHh--
Q 019387 164 KGQTVGVIGAG-RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASS----MDEVL-- 234 (342)
Q Consensus 164 ~gktvgIvG~G-~IG~~vA~~l~~af-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----l~~ll-- 234 (342)
.|++|.|.|.| .||..+++.+ +.. |++|++.+++++..... ..+ +.... .... .+ +.++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a-~~~~Ga~Vi~~~~~~~~~~~~--~~~-------g~~~~~~~~~-~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIA-KAVSGATIIGVDVREEAVEAA--KRA-------GADYVINASM-QDPLAEIRRITES 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHHTCCEEEEEESSHHHHHHH--HHH-------TCSEEEETTT-SCHHHHHHHHTTT
T ss_pred CCCEEEEECCCccHHHHHHHHH-HHcCCCeEEEEcCCHHHHHHH--HHh-------CCCEEecCCC-ccHHHHHHHHhcC
Confidence 47899999999 9999999985 777 99999999876542111 111 11100 0001 12 33333
Q ss_pred hcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc---ccCHHH
Q 019387 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP---VIDEVA 281 (342)
Q Consensus 235 ~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~---~vd~~a 281 (342)
...|+|+.+... +.+ -...++.++++..+|.++-.. .++...
T Consensus 239 ~~~d~vi~~~g~-~~~----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~ 283 (347)
T 1jvb_A 239 KGVDAVIDLNNS-EKT----LSVYPKALAKQGKYVMVGLFGADLHYHAPL 283 (347)
T ss_dssp SCEEEEEESCCC-HHH----HTTGGGGEEEEEEEEECCSSCCCCCCCHHH
T ss_pred CCceEEEECCCC-HHH----HHHHHHHHhcCCEEEEECCCCCCCCCCHHH
Confidence 257999988753 211 134567788899999887433 455443
No 483
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.22 E-value=0.73 Score=45.09 Aligned_cols=123 Identities=12% Similarity=0.086 Sum_probs=67.6
Q ss_pred ccccCCCeEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC-------ch--hHHHHHHhhhhh---hhhccCC-CCcccc
Q 019387 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY-------QA--TRLEKFVTAYGQ---FLKANGE-QPVTWK 225 (342)
Q Consensus 160 ~~~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~-~~d~~-------~~--~~~~~~~~~~~~---~~~~~~~-~~~~~~ 225 (342)
|.++.|+||.|-|+|++|+.+|+.| ...|++|+ +.|.+ .- ..++...+.-.. .+..... .+ +..
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L-~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~-~a~ 324 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKL-LHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSS-TAK 324 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHH-HHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCS-SCE
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcC-CcE
Confidence 3568899999999999999999997 68899998 34431 11 111111110000 0000000 00 001
Q ss_pred ccCCHHHH-hhcCCEEEEcCCCCcccccccCHHHHhcCC-CC-cEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 226 RASSMDEV-LREADVISLHPVLDKTTYHLINKERLATMK-KE-AILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 226 ~~~~l~~l-l~~aDiV~l~~pl~~~t~~li~~~~l~~mk-~g-a~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
... -+++ -..||+++-|.. .+.|+.+....+. .+ .+++--+-+++ ..+| .+.|.+..|.
T Consensus 325 ~v~-~~~~~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 325 YFP-NEKPWGVPCTLAFPCAT-----QNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp ECS-SCCTTSSCCSEEEECSS-----TTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred Eec-CcCeeecCccEEEeccc-----cCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 111 0111 237999987763 4667766666651 12 36667777775 5555 6777766654
No 484
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.20 E-value=0.17 Score=47.12 Aligned_cols=103 Identities=23% Similarity=0.283 Sum_probs=60.7
Q ss_pred CCeEEEEe-cCHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccc---cCCHHHHhhcCC
Q 019387 165 GQTVGVIG-AGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREAD 238 (342)
Q Consensus 165 gktvgIvG-~G~IG~~vA~~l~~afg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~ll~~aD 238 (342)
..+|+|+| .|.+|..++..|+ ..| -+|..+|..+... .. .. +.... .+..... ..++++.+++||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~-~~g~~~ev~l~Di~~~~~-~~--~d----L~~~~-~~~~v~~~~~t~d~~~al~gaD 78 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMK-MNPLVSVLHLYDVVNAPG-VT--AD----ISHMD-TGAVVRGFLGQQQLEAALTGMD 78 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHH-HCTTEEEEEEEESSSHHH-HH--HH----HHTSC-SSCEEEEEESHHHHHHHHTTCS
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEeCCCcHh-HH--HH----hhccc-ccceEEEEeCCCCHHHHcCCCC
Confidence 35899999 8999999999874 456 6899999766411 11 00 11101 1111111 236778899999
Q ss_pred EEEEcCCCCcccccc-------cC----H---HHHhcCCCCcEEEEcCCCcccCH
Q 019387 239 VISLHPVLDKTTYHL-------IN----K---ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 239 iV~l~~pl~~~t~~l-------i~----~---~~l~~mk~ga~lINvaRG~~vd~ 279 (342)
+|+++.+... ..+. .| . +.+....+.+++++++ ..+|.
T Consensus 79 vVi~~ag~~~-~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 79 LIIVPAGVPR-KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp EEEECCCCCC-CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred EEEEcCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 9999986432 2221 11 1 1222234678888874 45555
No 485
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=93.17 E-value=0.097 Score=46.75 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=31.7
Q ss_pred cCCCeEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCc
Q 019387 163 LKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (342)
Q Consensus 163 L~gktvgIvG~---G~IG~~vA~~l~~afg~~V~~~d~~~ 199 (342)
+.||++.|.|- |.||+.+|+.|+ ..|++|++.+++.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEcCcH
Confidence 67899999997 699999999985 6799999998875
No 486
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.10 E-value=0.04 Score=50.75 Aligned_cols=88 Identities=10% Similarity=0.118 Sum_probs=54.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEc
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~ 243 (342)
.|++|.|+|.|.+|+..++. ++.+|++|++.+ ++++. +. ...++ .... + .+.+++-...|+|+-|
T Consensus 142 ~g~~VlV~GaG~vG~~a~ql-ak~~Ga~Vi~~~-~~~~~-~~-~~~lG-------a~~v-~---~d~~~v~~g~Dvv~d~ 206 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQM-LNNAGYVVDLVS-ASLSQ-AL-AAKRG-------VRHL-Y---REPSQVTQKYFAIFDA 206 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHH-HHHHTCEEEEEC-SSCCH-HH-HHHHT-------EEEE-E---SSGGGCCSCEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCEEEEEE-ChhhH-HH-HHHcC-------CCEE-E---cCHHHhCCCccEEEEC
Confidence 58899999999999999998 589999999998 55432 11 11111 1000 0 0122223568898888
Q ss_pred CCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 244 PVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 244 ~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
... +.+ ...++.++++..++.++
T Consensus 207 ~g~-~~~-----~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 207 VNS-QNA-----AALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------------TTGGGEEEEEEEEEEC
T ss_pred CCc-hhH-----HHHHHHhcCCCEEEEEe
Confidence 763 221 34577888888888884
No 487
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.10 E-value=0.67 Score=45.63 Aligned_cols=116 Identities=18% Similarity=0.192 Sum_probs=70.5
Q ss_pred ccCCCeEEEEecCHHHHHHHHHHHhcCCcEEEEE--------cCCch--hHHHHHHhhhhhhhhccCCCCccccccCCHH
Q 019387 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY--------DLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (342)
Q Consensus 162 ~L~gktvgIvG~G~IG~~vA~~l~~afg~~V~~~--------d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (342)
+|.|+||.|-|+|++|+..|+.| ..+|++|++. |+..- ..+..+....+.. .+... .....+ +
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L-~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i---~~~~~--a~~~~~-~ 313 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYL-HRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTI---LGFPK--AKIYEG-S 313 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSS---TTCTT--SEEECS-C
T ss_pred CcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCe---ecccC--ceeecc-c
Confidence 58999999999999999999997 5789999863 22211 1122221111110 01000 011111 1
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 019387 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 232 ~ll~~aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~~vd~~aL~~aL~~g~i~ 292 (342)
-+-..||+++-|.- .+.|+.+....++ =.+++--+-+++ +.+| .+.|.+..|.
T Consensus 314 il~~~~DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 314 ILEVDCDILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNIM 366 (501)
T ss_dssp GGGSCCSEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cccccceEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCCE
Confidence 12246999997753 4778887777776 358888889884 5554 4567665553
No 488
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.09 E-value=0.068 Score=46.63 Aligned_cols=77 Identities=12% Similarity=0.145 Sum_probs=50.1
Q ss_pred cCCCeEEEEe-cCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCE
Q 019387 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 163 L~gktvgIvG-~G~IG~~vA~~l~~afg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDi 239 (342)
+.++++.|.| -|.||+.+++.|+ .-|. +|++.++++....+...... ...........++++++.+.|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~-~~G~~~~V~~~~r~~~~~~~~~~~~~-------~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEIL-EQGLFSKVTLIGRRKLTFDEEAYKNV-------NQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHH-HHTCCSEEEEEESSCCCCCSGGGGGC-------EEEECCGGGGGGGGGGGSSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHH-cCCCCCEEEEEEcCCCCccccccCCc-------eEEecCcCCHHHHHHHhcCCCE
Confidence 4578999999 6999999999985 5688 99999887643110000000 0000111223467778889999
Q ss_pred EEEcCCCC
Q 019387 240 ISLHPVLD 247 (342)
Q Consensus 240 V~l~~pl~ 247 (342)
|+.+....
T Consensus 88 vi~~ag~~ 95 (242)
T 2bka_A 88 GFCCLGTT 95 (242)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99988654
No 489
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=93.08 E-value=0.13 Score=48.27 Aligned_cols=37 Identities=19% Similarity=0.426 Sum_probs=32.5
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcC-CcEEEEEcCCchh
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQAT 201 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~af-g~~V~~~d~~~~~ 201 (342)
.|++|.|+|.|.+|...++. ++.+ |++|++.++++++
T Consensus 186 ~g~~VlV~GaG~vG~~avql-ak~~~Ga~Vi~~~~~~~~ 223 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQL-LKVMTPATVIALDVKEEK 223 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHHCCCEEEEEESSHHH
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEeCCHHH
Confidence 47899999999999999998 5888 9999999987654
No 490
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=93.07 E-value=0.14 Score=48.55 Aligned_cols=32 Identities=34% Similarity=0.501 Sum_probs=23.6
Q ss_pred eEEEEecCHHHHHHHHHHHhc-C--CcEEEE-EcCC
Q 019387 167 TVGVIGAGRIGSAYARMMVEG-F--KMNLIY-YDLY 198 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~~a-f--g~~V~~-~d~~ 198 (342)
+|||+|+|.||+.+++.+.+. . +++|.+ +|..
T Consensus 6 ~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~ 41 (358)
T 1ebf_A 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAE 41 (358)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECC
Confidence 799999999999999987432 2 366654 5543
No 491
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=93.00 E-value=0.073 Score=47.50 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=32.7
Q ss_pred ccCCCeEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 019387 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~L~gktvgIvG~---G~IG~~vA~~l~~afg~~V~~~d~~~~ 200 (342)
.+.||++.|.|- |.||+.+|+.|+ .-|++|++.++..+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAER 45 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 578999999997 699999999985 56999999988763
No 492
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.00 E-value=0.27 Score=45.57 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=57.8
Q ss_pred CCCeEEEEecCHHHHHHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------hc
Q 019387 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvgIvG~G~IG~~vA~~l~~afg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~~ 236 (342)
.|++|.|.|.|.+|...++. ++.+|+++ ++.++++++. + +...+ +....-.....+..+.. ..
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~-ak~~G~~~vi~~~~~~~k~-~-~a~~l-------Ga~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQC-AVALGAKSVTAIDISSEKL-A-LAKSF-------GAMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHH-HHHTTCSEEEEEESCHHHH-H-HHHHT-------TCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred CCCEEEEECCCCcchHHHHH-HHHcCCcEEEEEechHHHH-H-HHHHc-------CCeEEEeCCCCCHHHHHHhhcccCC
Confidence 58899999999999999998 48999865 6778776542 1 11111 21111111112333332 23
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINva 272 (342)
.|+|+-+... +++ -...++.+++|..++.++
T Consensus 230 ~d~v~d~~G~-~~~----~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 230 NQLILETAGV-PQT----VELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SEEEEECSCS-HHH----HHHHHHHCCTTCEEEECC
T ss_pred cccccccccc-cch----hhhhhheecCCeEEEEEe
Confidence 6888877652 221 235678899999888876
No 493
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.99 E-value=0.16 Score=47.45 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=60.0
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHh------hc
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll------~~ 236 (342)
.|++|.|+| .|.||..+++.+ +..|++|++. .+++. .+. ...++ ... +....++.+.+ ..
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a-~~~Ga~Vi~~-~~~~~-~~~-~~~lG-------a~~--i~~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIA-LARGARVFAT-ARGSD-LEY-VRDLG-------ATP--IDASREPEDYAAEHTAGQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEE-ECHHH-HHH-HHHHT-------SEE--EETTSCHHHHHHHHHTTSC
T ss_pred CCCEEEEecCCCHHHHHHHHHH-HHCCCEEEEE-eCHHH-HHH-HHHcC-------CCE--eccCCCHHHHHHHHhcCCC
Confidence 588999999 899999999985 8999999988 54433 221 12221 111 11122333332 25
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCCCc
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaRG~ 275 (342)
.|+|+.|... + .-...+..++++..+|.++-..
T Consensus 217 ~D~vid~~g~-~-----~~~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 217 FDLVYDTLGG-P-----VLDASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp EEEEEESSCT-H-----HHHHHHHHEEEEEEEEESCCCS
T ss_pred ceEEEECCCc-H-----HHHHHHHHHhcCCeEEEEcccC
Confidence 8999988762 1 2345677888999999886444
No 494
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.98 E-value=0.09 Score=47.23 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=45.6
Q ss_pred CCeEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCC--ccccccCCHHHHhhc-CCEEE
Q 019387 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLRE-ADVIS 241 (342)
Q Consensus 165 gktvgIvG~G~IG~~vA~~l~~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ll~~-aDiV~ 241 (342)
+++|.|.|.|.||+.+++.| ..-|.+|++.++..+... .+... .......++++++.. +|+|+
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 68 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRL-TAQGHEVTGLRRSAQPMP-------------AGVQTLIADVTRPDTLASIVHLRPEILV 68 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHH-HHTTCCEEEEECTTSCCC-------------TTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCccccc-------------cCCceEEccCCChHHHHHhhcCCCCEEE
Confidence 57899999999999999998 467999999988754310 00000 011122455667777 99998
Q ss_pred EcCC
Q 019387 242 LHPV 245 (342)
Q Consensus 242 l~~p 245 (342)
.+..
T Consensus 69 h~a~ 72 (286)
T 3gpi_A 69 YCVA 72 (286)
T ss_dssp ECHH
T ss_pred EeCC
Confidence 7764
No 495
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.97 E-value=0.24 Score=46.55 Aligned_cols=94 Identities=13% Similarity=0.158 Sum_probs=60.0
Q ss_pred CCCeEEEEe-cCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhh-----c
Q 019387 164 KGQTVGVIG-AGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvgIvG-~G~IG~~vA~~l~~a-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-----~ 236 (342)
.|++|.|+| .|.||...++. ++. .|++|++.++++++. +. ...+ +... .+....++.+.+. .
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~ql-ak~~~g~~Vi~~~~~~~~~-~~-~~~l-------Gad~-vi~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQI-ARQRTDLTVIATASRPETQ-EW-VKSL-------GAHH-VIDHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHH-HHHHCCSEEEEECSSHHHH-HH-HHHT-------TCSE-EECTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHH-HHHhcCCEEEEEeCCHHHH-HH-HHHc-------CCCE-EEeCCCCHHHHHHHhcCCC
Confidence 588999999 99999999998 477 599999999876542 11 1111 2111 1111223444332 5
Q ss_pred CCEEEEcCCCCcccccccCHHHHhcCCCCcEEEEcCC
Q 019387 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 aDiV~l~~pl~~~t~~li~~~~l~~mk~ga~lINvaR 273 (342)
.|+|+.|.... . .-...++.++++..+|.++.
T Consensus 240 ~Dvvid~~g~~-~----~~~~~~~~l~~~G~iv~~g~ 271 (363)
T 4dvj_A 240 PAFVFSTTHTD-K----HAAEIADLIAPQGRFCLIDD 271 (363)
T ss_dssp EEEEEECSCHH-H----HHHHHHHHSCTTCEEEECSC
T ss_pred ceEEEECCCch-h----hHHHHHHHhcCCCEEEEECC
Confidence 78888877521 1 12456788899988888853
No 496
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.94 E-value=0.39 Score=44.21 Aligned_cols=112 Identities=14% Similarity=0.202 Sum_probs=59.9
Q ss_pred eEEEEecCHHHHHHHHHHH-hcCCcEEEEEcCCchhHHHHHHhhhhhhhhccCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019387 167 TVGVIGAGRIGSAYARMMV-EGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvgIvG~G~IG~~vA~~l~-~afg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aDiV~l~~p 245 (342)
+|+|||.|.||+++|-.|+ +++--++..||...........+- .+-...-... .......+. +.+++||+|+++.-
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL-~h~~~~~~~~-~~i~~~~d~-~~~~~aDvVvitAG 78 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDL-AHAAAGIDKY-PKIVGGADY-SLLKGSEIIVVTAG 78 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHH-HHHHGGGTCC-CEEEEESCG-GGGTTCSEEEECCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhh-hcccccCCCC-CeEecCCCH-HHhCCCCEEEEecC
Confidence 7999999999999998753 344458999998764221111110 0000000000 011112233 45789999998863
Q ss_pred --CCc-ccc-ccc--CH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 019387 246 --LDK-TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (342)
Q Consensus 246 --l~~-~t~-~li--~~-------~~l~~mk~ga~lINvaRG~~vd~~aL~ 283 (342)
..| .|| .++ |. +.+..-.|+++++.++- .+|.-..+
T Consensus 79 ~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN--Pvd~~t~i 127 (294)
T 2x0j_A 79 LARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN--PMDVMTYI 127 (294)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS--SHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC--cchhhHHh
Confidence 222 122 111 11 23444567888888854 45555444
No 497
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.89 E-value=0.34 Score=43.75 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=48.6
Q ss_pred CCeEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchh----HHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcC
Q 019387 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT----RLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (342)
Q Consensus 165 gktvgIvG-~G~IG~~vA~~l~~afg~~V~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~a 237 (342)
.++|.|.| .|.||+.+++.|+ .-|.+|.+.++.... ..+.. ..+ ...+.... ......++.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASI-SLGHPTYVLFRPEVVSNIDKVQML-LYF----KQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HTTCCEEEECCSCCSSCHHHHHHH-HHH----HTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-hCCCcEEEEECCCcccchhHHHHH-HHH----HhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 46899999 5999999999984 568999999987421 11110 000 01111111 112234677889999
Q ss_pred CEEEEcCCCC
Q 019387 238 DVISLHPVLD 247 (342)
Q Consensus 238 DiV~l~~pl~ 247 (342)
|+|+.+.+..
T Consensus 78 d~vi~~a~~~ 87 (313)
T 1qyd_A 78 DVVISALAGG 87 (313)
T ss_dssp SEEEECCCCS
T ss_pred CEEEECCccc
Confidence 9999887643
No 498
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.82 E-value=0.097 Score=46.65 Aligned_cols=40 Identities=35% Similarity=0.383 Sum_probs=34.5
Q ss_pred cccCCCeEEEEec-C-HHHHHHHHHHHhcCCcEEEEEcCCchh
Q 019387 161 NLLKGQTVGVIGA-G-RIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~L~gktvgIvG~-G-~IG~~vA~~l~~afg~~V~~~d~~~~~ 201 (342)
..+.||++.|.|- | .||+.+|+.|+ ..|++|++.+++.+.
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~~~~ 59 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYHERR 59 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESCHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCCHHH
Confidence 3588999999998 8 59999999985 679999999988654
No 499
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=92.75 E-value=0.26 Score=44.46 Aligned_cols=76 Identities=12% Similarity=0.140 Sum_probs=47.8
Q ss_pred CCeEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCc-h-----hHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhh
Q 019387 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ-A-----TRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLR 235 (342)
Q Consensus 165 gktvgIvG~-G~IG~~vA~~l~~afg~~V~~~d~~~-~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~ 235 (342)
+++|.|.|- |.||+.+++.|+ .-|.+|.+.++.+ . ...+.. ..+ ...+.... ......++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l----~~~~v~~v~~D~~d~~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASI-KAGNPTYALVRKTITAANPETKEELI-DNY----QSLGVILLEGDINDHETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HHTCCEEEEECCSCCSSCHHHHHHHH-HHH----HHTTCEEEECCTTCHHHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHH-hCCCcEEEEECCCcccCChHHHHHHH-HHH----HhCCCEEEEeCCCCHHHHHHHHh
Confidence 578999996 999999999985 5588999988875 1 111110 000 01111111 1112346778899
Q ss_pred cCCEEEEcCCC
Q 019387 236 EADVISLHPVL 246 (342)
Q Consensus 236 ~aDiV~l~~pl 246 (342)
++|+|+.+.+.
T Consensus 76 ~~d~vi~~a~~ 86 (307)
T 2gas_A 76 QVDIVICAAGR 86 (307)
T ss_dssp TCSEEEECSSS
T ss_pred CCCEEEECCcc
Confidence 99999988764
No 500
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.71 E-value=0.21 Score=45.13 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=48.0
Q ss_pred CCeEEEEec-CHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhccCCCCc--cccccCCHHHHhhcCCEE
Q 019387 165 GQTVGVIGA-GRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvgIvG~-G~IG~~vA~~l~~afg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~aDiV 240 (342)
+++|.|.|- |.||+.+++.|+ .-| .+|.+.++++......... ..+.... .+....+++++++++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~~V~~~~R~~~~~~~~~l~-------~~~~~~~~~D~~d~~~l~~~~~~~d~v 76 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLL-EDGTFKVRVVTRNPRKKAAKELR-------LQGAEVVQGDQDDQVIMELALNGAYAT 76 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HHCSSEEEEEESCTTSHHHHHHH-------HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHH-hcCCceEEEEEcCCCCHHHHHHH-------HCCCEEEEecCCCHHHHHHHHhcCCEE
Confidence 578999998 999999999985 457 8999998876542111100 0111111 111234677889999999
Q ss_pred EEcCC
Q 019387 241 SLHPV 245 (342)
Q Consensus 241 ~l~~p 245 (342)
+.+.+
T Consensus 77 i~~a~ 81 (299)
T 2wm3_A 77 FIVTN 81 (299)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98865
Done!