BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019389
(341 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana
GN=At3g57810 PE=2 SV=1
Length = 317
Score = 300 bits (769), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 215/341 (63%), Gaps = 33/341 (9%)
Query: 1 MIVSTSICACAKNVVNLGGRFQGQMGGNICGVTYRGPSSSCCFYLCSGQSKKNYAGISRT 60
MI + I C++N +++ + +G + GV G S C+ L SG S+++Y G +
Sbjct: 2 MICYSPITTCSRNAISI----KRHLGSRLYGVVAHGSSKFSCYSLLSGLSRRHYTGFRVS 57
Query: 61 ISSSSLNVLQPFQATCFSPGLTKPRCNLRPLTIRSFIGSRGSQKRHIEISLACRSMKMRL 120
+S+ +P ++ GL RP + K +E+S M+
Sbjct: 58 VSN------RP--SSWHDKGLFGSVLINRPTV---------APKEKLEVSFLSPEANMKC 100
Query: 121 LVPSQGVLPKLKLNAGPIDWPKGCASAGLICGLLVCYSSSK--AHAEAADEKEDGEEDYD 178
K++ N + A G+I LLVCYSS+ A+A+++ +K+ +
Sbjct: 101 --------SKIESNMRNLYCYSRFAYTGVIVSLLVCYSSTSQSAYADSSRDKDANNVHHH 152
Query: 179 LSNVKYSHGKKVYTDYSVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAK 238
S+ K+ +GK+VYTDYS+IGIPGDGRCLFR+VAHG CLR+GK AP +QRELAD+LR +
Sbjct: 153 SSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCLRSGKLAPGEKMQRELADELRTR 212
Query: 239 VADEFIKRREETEWFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAG 298
VADEFI+RR+ETEWF+EGDFD YV QIR PHVWGGEPEL MASHVL+MPITVYM D AG
Sbjct: 213 VADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKDDKAG 272
Query: 299 GLISIAEYGQEYGKEKPIRVLYHGFGHYDALQNLGHEGGIS 339
GLISIAEYGQEYGK+ PIRVLYHGFGHYDAL L HE S
Sbjct: 273 GLISIAEYGQEYGKDDPIRVLYHGFGHYDAL--LLHESKAS 311
>sp|Q6GM06|OTU6B_XENLA OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2
SV=1
Length = 294
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 155 VCYSSSKAHAEAADEKEDGE-----EDYDLSNVKYSHGKKVYT-----DYSVIGIPGDGR 204
V + + +AA EKE + E +LS ++ +K+ + + IP DG
Sbjct: 101 VSKAQKRREKKAAQEKERDDRIAEAEIANLSGARHLESQKLAQILAERELQIRQIPSDGH 160
Query: 205 CLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVAD--EFIKRREETEWFIEGDFDLYV 262
C++RA+ H G +++ + AD ++ + D F+ + + + +F Y
Sbjct: 161 CMYRAIEHQLN-EQGNSLTVANLRSQTADYMQKRAEDFLPFLTNSSTGDMYTQEEFQKYC 219
Query: 263 SQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLY-- 320
+ I WGG+ EL SH+L+ PI V A L + G+EY KPI ++Y
Sbjct: 220 TDIVNTPAWGGQLELRALSHILKTPIEVIQ----AESLPIV--IGEEYSN-KPITLVYMR 272
Query: 321 HGFG---HYDALQNL 332
H +G HY++++ L
Sbjct: 273 HAYGLGEHYNSVEQL 287
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
Query: 198 GIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFI---KRREETEWFI 254
IP DG C++RA+ + SV + R K DEF+ E ++ F
Sbjct: 145 AIPADGHCMYRAIQDQLVF-----SVSVEMLRCRTASYMKKHVDEFLPFFSNPETSDSFG 199
Query: 255 EGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEK 314
DF +Y I + WGG+ EL SHVL+ PI V D+ LI G+EY K K
Sbjct: 200 YDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVI--QADSPTLI----IGEEYVK-K 252
Query: 315 PIRVLYHGFG-----HYDALQNL--GHEGGI 338
PI ++Y + HY+++ L G GG+
Sbjct: 253 PIILVYLRYAYSLGEHYNSVTPLEAGAAGGV 283
>sp|Q5M8L0|OTU6B_XENTR OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b
PE=2 SV=1
Length = 294
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 37/216 (17%)
Query: 134 NAGPIDWPKGCASAGLICGLLVCYSSSKAHAEAADEKEDGE-----EDYDLSNVKYSHGK 188
N P+ P+ + + +AA EKE E E +LS ++ +
Sbjct: 92 NEAPVQQPRQSKA------------QKRREKKAAQEKERDERIAEAEIANLSGARHLESQ 139
Query: 189 KV-----YTDYSVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVAD-- 241
K+ + + IP DG C++RA+ H R G +++ + AD ++ D
Sbjct: 140 KLARILAERELQIRQIPSDGHCMYRAIEHQLRER-GNDLTVANLRSQTADYMQNHAEDFL 198
Query: 242 EFIKRREETEWFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLI 301
F+ + + + +F Y + I WGG+ EL SH+L+ I V + I
Sbjct: 199 PFLTNSSTGDMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILKTAIEVIQAE---SSPI 255
Query: 302 SIAEYGQEYGKEKPIRVLY--HGFG---HYDALQNL 332
I G+EY K I ++Y H +G HY++++ L
Sbjct: 256 VI---GEEYSS-KAITLVYMRHAYGLGEHYNSVELL 287
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
Query: 195 SVIGIPGDGRCLFRAVAHGACLRAGKPAPSV-SIQRELADDLRAKVAD--EFIKRREETE 251
+ IP DG C+++A+ L+ A +V +++ + A+ +++ V D F+ +
Sbjct: 148 EIKQIPSDGHCMYKAIEDQ--LKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGD 205
Query: 252 WFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYG 311
+ +F Y I WGG+ EL SH+L+ PI + D+ +I G+EY
Sbjct: 206 MYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEII--QADSPPII----VGEEYS 259
Query: 312 KEKPIRVLY--HGFG---HYDALQNL 332
K KP+ ++Y H +G HY+++ L
Sbjct: 260 K-KPLILVYMRHAYGLGEHYNSVTRL 284
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 174 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 222
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+++ RK + G E+ + + P+ VY + + +G + +++PIRV YH
Sbjct: 223 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTF----HGIQKNEDEPIRVSYH 278
Query: 322 GFGHYDALQN 331
HY+++ N
Sbjct: 279 RNIHYNSVVN 288
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 221 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 269
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEY-GQEYGKEKPIRVLY 320
+++ RK + G E+ + + P+ VY + + I + G +++PIRV Y
Sbjct: 270 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSY 329
Query: 321 HGFGHYDALQN 331
H HY+++ N
Sbjct: 330 HRNIHYNSVVN 340
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 196 VIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVAD--EFIKRREETEWF 253
+ I DG C++RAV H R G ++ + A +R+ D F+ + +
Sbjct: 149 IKEISSDGHCMYRAVEHQLTER-GLALGLKELRDQTAQYMRSHADDFMPFLTNPNTGDMY 207
Query: 254 IEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKE 313
+F+ Y S + WGG+ EL S VL++PI V D I+I G+EY K
Sbjct: 208 TAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQAD---SPCITI---GEEYDKP 261
Query: 314 KPIRVLY--HGFG---HYDALQNL 332
K I ++Y H +G HY++++ L
Sbjct: 262 K-ITLIYMRHAYGLGEHYNSVEPL 284
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 179 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 227
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+++ RK + G E+ + + P+ VY + + +G + +++PIRV YH
Sbjct: 228 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTF----HGIQQNEDEPIRVSYH 283
Query: 322 GFGHYDALQN 331
HY+++ N
Sbjct: 284 RNIHYNSVVN 293
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 179 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 227
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+++ RK + G E+ + + P+ VY + + +G + +++PIRV YH
Sbjct: 228 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTF----HGIQQNEDEPIRVSYH 283
Query: 322 GFGHYDALQN 331
HY+++ N
Sbjct: 284 RNIHYNSVVN 293
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 221 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 269
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+++ RK + G E+ + + P+ VY + + +G +++PIRV YH
Sbjct: 270 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTF----HGIHQNEDEPIRVSYH 325
Query: 322 GFGHYDALQN 331
HY+++ N
Sbjct: 326 RNIHYNSVVN 335
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 221 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 269
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+++ RK + G E+ + + P+ VY + + +G +++PIRV YH
Sbjct: 270 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTF----HGIHQNEDEPIRVSYH 325
Query: 322 GFGHYDALQN 331
HY+++ N
Sbjct: 326 RNIHYNSVVN 335
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA V +++ + +R D +K + ++ DF Y
Sbjct: 219 DGACLFRAVAD-----------QVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTY 267
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEY-GQEYGKEKPIRVLY 320
+++ RK + G E+ + + P+ VY G I + G ++PIRV Y
Sbjct: 268 INRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ-----SGTEPINTFHGIHQNNDEPIRVSY 322
Query: 321 HGFGHYDALQN 331
H HY+++ N
Sbjct: 323 HRNIHYNSVVN 333
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 193 DYSVIGIPGDGRCLFRAVAHGACLRAGKPAPSV-SIQRELADDLRAKVAD--EFIKRREE 249
+ + IP DG C++ A+ LR A +V S++R+ A+ ++ D F+
Sbjct: 147 ELEIKQIPSDGHCMYGALEDQ--LREQDCALTVASLRRQTAEYMQTHSDDFLPFLTNPST 204
Query: 250 TEWFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQE 309
+ + +F Y I WGG+ EL SH+L+ PI + DA +I G+E
Sbjct: 205 GDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEILQ--ADAPPII----VGEE 258
Query: 310 YGKEKPIRVLY--HGFG---HYDALQNL 332
Y + P+ ++Y H +G HY+++ L
Sbjct: 259 YPR-NPLVLVYMRHAYGLGEHYNSVTRL 285
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 195 SVIGIPGDGRCLFRAVAHGACLRAGKPAPSV-SIQRELADDLRAKVAD--EFIKRREETE 251
+ IP DG C++RA+ L+ + +V +++ + A + + D F+ +
Sbjct: 157 EIKQIPSDGHCMYRAIEDQ--LKDHHNSWTVATLRNQTAKYIHSHFDDFLPFLTNPNTGD 214
Query: 252 WFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYG 311
+ + +F+ Y I WGG+ EL SH+L+ PI V D+ +I G+EY
Sbjct: 215 MYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTPIEVVQ--MDSPSII----VGEEYS 268
Query: 312 KEKPIRVLY--HGFG---HYDALQNL 332
KPI ++Y H +G HY++++ L
Sbjct: 269 G-KPIILVYMRHAYGLGEHYNSVKLL 293
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVA-------DEFIKRREETE 251
IP DG C++RA+ SV+I + LR + A D+F+ E E
Sbjct: 147 IPADGHCMYRAIQDQLVF-------SVTI-----ESLRYRTAYYMRKHIDDFLPFFTEPE 194
Query: 252 ---WFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQ 308
++ DF Y I WGG+ EL SHVL+ PI V + I I G+
Sbjct: 195 AGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQAN---SPTIVI---GE 248
Query: 309 EYGKEKPIRVLYHGFG-----HYDALQ 330
EY + KP+ ++Y + HY++++
Sbjct: 249 EYTR-KPVTLVYLHYACDFGEHYNSVK 274
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 172 DGEEDYDLSNVKYSHGKKVYTDYSVIG--IPGDGRCLFRAVAHGACLRAGKPAPSVSIQR 229
+ E+ DL N + K+ + ++ IP DG CLF +++H S +
Sbjct: 161 ESEKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISHQLNYHHNVKLNSQA--- 217
Query: 230 ELADDLRAKVADEFIKRREETEWFIEGD-------FDLYVSQIRKPHVWGGEPELLMASH 282
LR K AD +K E+ E F+ + Y ++IR WG + E+ ++
Sbjct: 218 -----LRNKSADYVLKHCEQFEGFLLDEESGEVLPVSDYCNEIRNNSKWGSDIEIQALAN 272
Query: 283 VLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLY--HGFG---HYDAL 329
L +P+ VY + G ++ ++ EKP+ + Y H FG HY++L
Sbjct: 273 SLEVPVHVYNTE---GPVLKFNPSTVKF--EKPLCIAYYQHLFGLGAHYNSL 319
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 197 IGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQ----RELADDLRAKVADEFIKRREETEW 252
I DG CLF ++ LR + R L+ + + D+FI + E
Sbjct: 170 FDIQPDGHCLFASILDQLKLRHDPKKLDQDMDVMKLRWLSCNYVQEHRDDFIPYLFDEET 229
Query: 253 FIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGK 312
D D Y ++ WGGE E+L SHV PI++ M +G I + Y E GK
Sbjct: 230 MKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDCPISILM----SGRPIQV--YN-ECGK 282
Query: 313 EKPIRVLY--HGFG---HYDALQN 331
++++Y H + HY++L +
Sbjct: 283 NPELKLVYYKHSYALGEHYNSLHD 306
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 28/128 (21%)
Query: 173 GEEDYDLSNVKYSHGKKVYTDYSVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELA 232
G D DL + G Y VI + GDG CLFRAV G LR + ++ E
Sbjct: 591 GNADRDLEILARRRG------YKVIPVKGDGNCLFRAV--GKSLRLNQ---NIKYSHE-- 637
Query: 233 DDLRAKVADEFIKRREETEWFIE-----GD---------FDLYVSQIRKPHVWGGEPELL 278
DLRA+V +E E ++E GD + Y+ I KP WG L
Sbjct: 638 -DLRAQVVTYLTSHKEFLEPYLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLR 696
Query: 279 MASHVLRM 286
+ S +L++
Sbjct: 697 VLSEILKV 704
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 17/126 (13%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA + V ++ LR + RE+ E FIEG F+ Y
Sbjct: 42 DGSCLFRAVAEQVLHSQSR---HVEVRMACIHYLR--------ENREKFEAFIEGSFEEY 90
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+ ++ P W G+ E+ S + R +Y +S ++ + EK + +
Sbjct: 91 LKRLENPQEWVGQVEISALSLMYRKDFIIYREPN-----VSPSQVTENNFPEKVLLCFSN 145
Query: 322 GFGHYD 327
G HYD
Sbjct: 146 G-NHYD 150
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CLFRAVA + V ++ LR + RE+ E FIEG F+ Y
Sbjct: 42 DGSCLFRAVAEQVLHSQSR---HVEVRMACIRYLR--------ENREKFEAFIEGSFEEY 90
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYM 292
+ ++ P W G+ E+ S + R +Y
Sbjct: 91 LKRLENPQEWVGQVEISALSLMYRKDFVIYQ 121
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGD- 257
+PGDG CLFRA+ G L G + ++E D + IK+RE+ E F+E D
Sbjct: 70 VPGDGNCLFRAL--GDQL-EGHSRNHLKHRQETVDYM--------IKQREDFEPFVEDDI 118
Query: 258 -FDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPI 316
F+ +V+ + KP + G ++ + ++ + ++ + L I G E + +
Sbjct: 119 PFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLN---APLWQI--RGTEKSSVREL 173
Query: 317 RVLYHGFGHYDALQNLG 333
+ Y HYD+++ +
Sbjct: 174 HIAYRYGEHYDSVRRIN 190
>sp|Q00106|VG65_ICHVA Uncharacterized protein ORF65 OS=Ictalurid herpesvirus 1 (strain
Auburn) GN=ORF65 PE=4 SV=1
Length = 1434
Score = 41.6 bits (96), Expect = 0.009, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 171 EDGEEDY--DLSNVKYSHG-KKVYTDYSVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSI 227
E EED L N YS G K+VY IPGDG CL+ + A ++
Sbjct: 1265 ESLEEDQFTRLENTLYSMGLKRVY-------IPGDGNCLYNTLRFIA---GADGESAIDF 1314
Query: 228 QRELADDLRAKVADEFIKRREETEWFIEGDFDLYVSQIRK---PHVWGGEPELLMASHVL 284
++EL DD+R ++++ ++ E DL +++I P+V+ G +L+ +L
Sbjct: 1315 KKELLDDIR-----KYVRNQDPAER------DLILTEIDNLAGPNVY-GSGDLISFFQLL 1362
Query: 285 R-MPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYHGFGHYDAL 329
R + +TV DK G L+ + QE P ++ HY+ L
Sbjct: 1363 RGVGVTVVSWDKIGGRLVKLVATNQE--GIPPEYIILFTNSHYEPL 1406
>sp|Q32Q05|OTU1_RAT Ubiquitin thioesterase OTU1 OS=Rattus norvegicus GN=Yod1 PE=2 SV=1
Length = 343
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDF 258
+P D CLF +V + PA + ++R +A + A D + +E +
Sbjct: 149 VPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQ-IVASDPDLY------SEAILGKTN 201
Query: 259 DLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRV 318
+ Y IR+ WGG E+ + S + I V + I +G++ G K + +
Sbjct: 202 EEYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQT-----VRIDRFGEDAGYTKRVLL 256
Query: 319 LYHGFGHYDALQ 330
+Y G HYD LQ
Sbjct: 257 IYDGI-HYDPLQ 267
>sp|Q0IH43|OTU1_XENLA Ubiquitin thioesterase OTU1 OS=Xenopus laevis GN=yod1 PE=2 SV=1
Length = 304
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 19/135 (14%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDL---RAKVADEFIKRREETEWFIE 255
+P D CLF ++ + PA ++ ++ +A+ + ++ D + + E
Sbjct: 110 VPADNSCLFTSIYYVVEGGVYDPACALEMRSLIAEIVASDQSAYCDAVLGKSNEE----- 164
Query: 256 GDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKP 315
Y S IR+ WGG E+ + S + I V + I +G++ G K
Sbjct: 165 -----YCSWIRREDTWGGAIEVSILSKFYQCEICVV-----DTQTVRIDRFGEDSGYTKR 214
Query: 316 IRVLYHGFGHYDALQ 330
+ ++Y G HYD LQ
Sbjct: 215 VLLIYDGI-HYDPLQ 228
>sp|P43558|OTU1_YEAST Ubiquitin thioesterase OTU1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU1 PE=1 SV=1
Length = 301
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 195 SVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREE-TEWF 253
SV + D CLF A+A+G +++ DLR V+ E + + +
Sbjct: 110 SVHPVLDDNSCLFHAIAYGI------------FKQDSVRDLREMVSKEVLNNPVKFNDAI 157
Query: 254 IEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKE 313
++ Y I K WGG E+ + S L + +Y+ D DA + I ++ ++ +
Sbjct: 158 LDKPNKDYAQWILKMESWGGAIEIGIISDAL--AVAIYVVDIDA---VKIEKFNEDKF-D 211
Query: 314 KPIRVLYHGFGHYDAL 329
I +L++G HYD+L
Sbjct: 212 NYILILFNGI-HYDSL 226
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 13/130 (10%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CL+RAV+ S+ REL + +AD + IEGD +
Sbjct: 317 DGNCLYRAVSKTVYG-------DQSLHRELREQTVHYIADHL----DHFSPLIEGDVGEF 365
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLIS--IAEYGQEYGKEKPIRVL 319
+ + W G PELL +L + I + + +S I G E I +
Sbjct: 366 IIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLS 425
Query: 320 YHGFGHYDAL 329
+ GHYDA+
Sbjct: 426 WLSNGHYDAV 435
>sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1 OS=Danio rerio GN=yod1 PE=2 SV=1
Length = 301
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVS------IQRELADDLRAKVADEFIKRREETEW 252
+P D CLF +V + + G P+ + I + +A D A K EE
Sbjct: 107 VPADNSCLFTSVNY--VMEGGVYDPACASEMRGLIAQIVASDPTAYSEAVLGKTNEE--- 161
Query: 253 FIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGK 312
Y + IR+ WGG E+ + S + I V + + +G++ G
Sbjct: 162 --------YCTWIRRDDTWGGAIEVSILSKFYQCEICVV-----DTQTVRVDRFGEDAGY 208
Query: 313 EKPIRVLYHGFGHYDALQNL 332
K + ++Y G HYD LQ +
Sbjct: 209 TKRVLLIYDGI-HYDPLQKV 227
>sp|Q8CB27|OTU1_MOUSE Ubiquitin thioesterase OTU1 OS=Mus musculus GN=Yod1 PE=1 SV=1
Length = 343
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDF 258
+P D CLF +V + PA + ++R +A + +D + +E +
Sbjct: 149 VPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIA---QIVASDPVLY----SEAILGKTN 201
Query: 259 DLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRV 318
+ Y IR+ WGG E+ + S + I V + I +G++ G K + +
Sbjct: 202 EDYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQT-----VRIDRFGEDAGYTKRVLL 256
Query: 319 LYHGFGHYDALQ 330
+Y G HYD LQ
Sbjct: 257 IYDGI-HYDPLQ 267
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 13/130 (10%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
DG CL+RAV+ S+ REL + +AD + IEGD +
Sbjct: 290 DGNCLYRAVSKTVYG-------DQSLHRELREQTVHYIADHL----DHFSPLIEGDVGEF 338
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLIS--IAEYGQEYGKEKPIRVL 319
+ + W G PELL +L + I + + +S I G E I +
Sbjct: 339 IIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLS 398
Query: 320 YHGFGHYDAL 329
+ GHYDA+
Sbjct: 399 WLSNGHYDAV 408
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
D LFR +A + + L ++R + +R E I GDFD Y
Sbjct: 37 DASSLFRVIAE-----------QMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSY 85
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+ + KP +G EL S + R + +Y ++ Y + + RV ++
Sbjct: 86 MQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENF------RVFFN 139
Query: 322 GFGHYDALQNLGH 334
H+D++ ++ +
Sbjct: 140 NENHFDSVYDVEY 152
>sp|Q5F3A6|OTU1_CHICK Ubiquitin thioesterase OTU1 OS=Gallus gallus GN=YOD1 PE=2 SV=1
Length = 302
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 199 IPGDGRCLFRAV---AHGACLRAG-KPAPSVSIQRELADDLRAKVADEFIK-RREETEWF 253
+P D CLF +V G G P I + +A D A K RE EW
Sbjct: 108 VPADNSCLFTSVYYVVEGGVYDPGCAPEMRSLIAQIVASDPEAYCEAVLGKTNREYCEW- 166
Query: 254 IEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKE 313
IR+ WGG E+ + S + I V + I +G++ G
Sbjct: 167 -----------IRREETWGGAIEVSILSKFYQCEICVVDTQT-----VRIDRFGEDAGYT 210
Query: 314 KPIRVLYHGFGHYDALQN 331
K + ++Y G HYD L+
Sbjct: 211 KRVLLIYDGI-HYDPLER 227
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 17/129 (13%)
Query: 199 IPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDF 258
+ DG CLFRAVA + V ++ LR + RE+ E I G F
Sbjct: 39 VAKDGSCLFRAVAEQVLHSQSR---HVEVRMACIHCLR--------ENREKFEAIIGGSF 87
Query: 259 DLYVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRV 318
+ Y+ ++ P W G+ E+ S + R + +S ++ + EK +
Sbjct: 88 EGYLKRLENPQEWVGQMEISALSLMYRKDFITNLEPN-----VSPSQVTENNFPEKVLLC 142
Query: 319 LYHGFGHYD 327
+G HYD
Sbjct: 143 FSNG-NHYD 150
>sp|P0A8Z6|YBGC_SHIFL Acyl-CoA thioester hydrolase YbgC OS=Shigella flexneri GN=ybgC PE=3
SV=1
Length = 134
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 279 MASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYHGFGH 325
M + + R P+ VY D DAGG++ A Y Y + + + +H F
Sbjct: 1 MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQ 47
>sp|P0A8Z3|YBGC_ECOLI Acyl-CoA thioester hydrolase YbgC OS=Escherichia coli (strain K12)
GN=ybgC PE=1 SV=1
Length = 134
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 279 MASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYHGFGH 325
M + + R P+ VY D DAGG++ A Y Y + + + +H F
Sbjct: 1 MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQ 47
>sp|P0A8Z4|YBGC_ECOL6 Acyl-CoA thioester hydrolase YbgC OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=ybgC PE=3 SV=1
Length = 134
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 279 MASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYHGFGH 325
M + + R P+ VY D DAGG++ A Y Y + + + +H F
Sbjct: 1 MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQ 47
>sp|P0A8Z5|YBGC_ECO57 Acyl-CoA thioester hydrolase YbgC OS=Escherichia coli O157:H7
GN=ybgC PE=3 SV=1
Length = 134
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 279 MASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYHGFGH 325
M + + R P+ VY D DAGG++ A Y Y + + + +H F
Sbjct: 1 MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQ 47
>sp|Q8BYA0|TBCD_MOUSE Tubulin-specific chaperone D OS=Mus musculus GN=Tbcd PE=2 SV=1
Length = 1196
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 128 LPKLKLNAGPIDWPKGCASAGLICGLLVCYSSSKAHAEAADE-KEDGEEDYDLSNVKYSH 186
L LK + +GC S L L +C +D DG+EDYD+
Sbjct: 306 LTFLKPKVATWRYQRGCRS--LAANLKLCAPGKSDQKLLSDSLTSDGDEDYDVPE----- 358
Query: 187 GKKVYTDYSVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKR 246
G + + ++G+ + + A G AG+ + RELADD+ V D F +
Sbjct: 359 GVETVIEQLLVGLKDKDTVVRWSAAKGIGRMAGR------LPRELADDVVGSVLDCFSFQ 412
Query: 247 REETEW 252
+ W
Sbjct: 413 ETDKAW 418
>sp|A7GTG6|RNPH_BACCN Ribonuclease PH OS=Bacillus cereus subsp. cytotoxis (strain NVH
391-98) GN=rph PE=3 SV=1
Length = 245
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 224 SVSIQRELADDLRAKVADEFIKRREETEWF----IEGDFDLYVSQIRKPHVWG--GEPEL 277
++ IQR + LRA V E + R T W I+ D + I +V +L
Sbjct: 87 TMEIQRLIGRALRAVVDLEVLGER--TVWIDCDVIQADGGTRTASITGAYVAMVLAFEKL 144
Query: 278 LMASHVLRMPITVYMHDKDAG-----GLISIAEYGQEYGKEKPIRVLYHGFGHYDALQNL 332
L A V ++P+ Y+ G G++ Y ++ + + V+ G GH+ +Q
Sbjct: 145 LQAEKVTKIPVKDYLAATSVGILEEQGVVLDLNYAEDSKADVDMNVIMTGKGHFVEVQGT 204
Query: 333 GHEGGISK 340
G E S+
Sbjct: 205 GEEATFSR 212
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREET-EWFIEGDFDL 260
D CLFRA++ Q RA V+ ++K ++ E ++EG F+
Sbjct: 233 DASCLFRAISEQL----------FHSQIHHLQIRRACVS--YMKENQQAFESYVEGSFEK 280
Query: 261 YVSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLY 320
Y+ ++ P G+ EL S + +Y + ++ + G E I + Y
Sbjct: 281 YLERLGDPKESAGQLELKALSLIYNRDFIIYRYPGKPPTQVT------DNGFEDKIILCY 334
Query: 321 HGFGHYDAL 329
GHYD++
Sbjct: 335 SNNGHYDSV 343
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 202 DGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLRAKVADEFIKRREETEWFIEGDFDLY 261
D CLFRA++ + + ++R + ++ E ++EG F+ Y
Sbjct: 239 DASCLFRAISE-----------QLFCSQVHHLEIRKACVSYMRENQQTFESYVEGSFEKY 287
Query: 262 VSQIRKPHVWGGEPELLMASHVLRMPITVYMHDKDAGGLISIAEYGQEYGKEKPIRVLYH 321
+ ++ P G+ E+ S + +Y ++ + G E I + Y
Sbjct: 288 LERLGDPKESAGQLEIRALSLIYNRDFILYRFPGKPPTYVT------DNGYEDKILLCYS 341
Query: 322 GFGHYDAL 329
GHYD++
Sbjct: 342 SSGHYDSV 349
>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 3 GN=IIV3-084L PE=3 SV=1
Length = 844
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 186 HGKKVYTD---------YSVIGIPGDGRCLFRAVAHGACLRAGKPAPSVSIQRELADDLR 236
G+ YTD Y+V + GDG CLFR+V G+ +++ + D LR
Sbjct: 573 KGRTPYTDLEQLAQSKGYTVKQVSGDGNCLFRSVCKSIRALRGEKFTHRQLRQMVVDYLR 632
Query: 237 A-----KVADEFIKRREETEWFIEGDFDLYVSQIRKPHVWGGEPELLMASHVLRMPITVY 291
+V E++ R+ + + Y+S++ K WG L S +L++ +
Sbjct: 633 ENPEFLQVYLEYVARQRDNSL---PSTEQYLSEMSKCGTWGDLICLKTLSEILKVQFNLL 689
Query: 292 MHDKDAGGLIS 302
+ + ++S
Sbjct: 690 ILNTKQFQMVS 700
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,920,009
Number of Sequences: 539616
Number of extensions: 5707481
Number of successful extensions: 13306
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 13255
Number of HSP's gapped (non-prelim): 54
length of query: 341
length of database: 191,569,459
effective HSP length: 118
effective length of query: 223
effective length of database: 127,894,771
effective search space: 28520533933
effective search space used: 28520533933
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)