Query 019402
Match_columns 341
No_of_seqs 136 out of 1666
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 15:32:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otx_A Adenosine kinase, putat 100.0 1.4E-57 4.9E-62 416.9 38.8 340 2-341 5-346 (347)
2 3loo_A Anopheles gambiae adeno 100.0 7.6E-58 2.6E-62 421.1 35.9 338 4-341 23-362 (365)
3 3vas_A Putative adenosine kina 100.0 1E-57 3.5E-62 420.7 33.0 338 4-341 24-365 (370)
4 3uq6_A Adenosine kinase, putat 100.0 7.8E-56 2.7E-60 408.6 34.8 337 5-341 27-367 (372)
5 1bx4_A Protein (adenosine kina 100.0 8.1E-53 2.8E-57 385.1 36.9 338 4-341 6-345 (345)
6 2abs_A Adenosine kinase, AK; r 100.0 5.1E-50 1.7E-54 371.4 34.8 329 2-335 30-377 (383)
7 4e3a_A Sugar kinase protein; s 100.0 1.7E-49 5.9E-54 363.4 32.0 309 4-335 25-339 (352)
8 3ry7_A Ribokinase; transferase 100.0 8.7E-50 3E-54 358.8 18.4 295 3-340 1-301 (304)
9 1rkd_A Ribokinase; carbohydrat 100.0 3.2E-48 1.1E-52 349.4 20.9 297 1-340 1-301 (309)
10 2fv7_A Ribokinase; structural 100.0 1.1E-47 3.8E-52 348.9 20.7 299 1-341 21-327 (331)
11 4du5_A PFKB; structural genomi 100.0 1.1E-46 3.8E-51 343.0 24.9 295 1-340 23-331 (336)
12 3ljs_A Fructokinase; fructokia 100.0 2.1E-47 7.2E-52 348.2 19.2 296 1-340 1-322 (338)
13 3ikh_A Carbohydrate kinase; tr 100.0 8.5E-48 2.9E-52 344.9 15.9 277 1-340 1-282 (299)
14 3lhx_A Ketodeoxygluconokinase; 100.0 1E-46 3.5E-51 341.0 22.4 290 1-338 1-308 (319)
15 3go6_A Ribokinase RBSK; phosph 100.0 2.2E-47 7.4E-52 343.7 17.7 276 1-340 16-298 (310)
16 2rbc_A Sugar kinase, AGR_C_456 100.0 1E-46 3.4E-51 343.9 21.6 286 4-340 29-322 (343)
17 3kzh_A Probable sugar kinase; 100.0 7.5E-47 2.6E-51 343.1 20.5 294 2-339 4-302 (328)
18 3iq0_A Putative ribokinase II; 100.0 3.3E-47 1.1E-51 345.7 17.7 295 2-340 1-306 (330)
19 3h49_A Ribokinase; transferase 100.0 7.7E-46 2.6E-50 336.0 25.5 299 1-340 1-308 (325)
20 3hj6_A Fructokinase, FRK; fruc 100.0 7E-47 2.4E-51 343.2 17.2 294 3-341 20-322 (327)
21 3ktn_A Carbohydrate kinase, PF 100.0 1.6E-46 5.6E-51 343.4 19.3 298 3-340 1-325 (346)
22 3pl2_A Sugar kinase, ribokinas 100.0 2.6E-45 9E-50 331.8 26.0 294 1-340 5-311 (319)
23 4e69_A 2-dehydro-3-deoxyglucon 100.0 5.3E-45 1.8E-49 330.7 27.3 288 2-337 21-320 (328)
24 2c4e_A Sugar kinase MJ0406; tr 100.0 6.8E-46 2.3E-50 333.1 21.0 287 1-340 1-293 (302)
25 2nwh_A AGR_C_3442P, carbohydra 100.0 1.3E-45 4.3E-50 333.5 22.1 293 4-339 3-300 (317)
26 1vm7_A Ribokinase; TM0960, str 100.0 2E-45 6.8E-50 331.2 22.9 287 3-340 13-304 (311)
27 3umo_A 6-phosphofructokinase i 100.0 3.5E-45 1.2E-49 329.5 22.5 290 6-340 4-300 (309)
28 2qcv_A Putative 5-dehydro-2-de 100.0 6.7E-44 2.3E-48 324.3 29.3 297 2-340 9-319 (332)
29 3ie7_A LIN2199 protein; phosph 100.0 1E-44 3.6E-49 328.0 21.5 289 1-340 1-297 (320)
30 2jg1_A Tagatose-6-phosphate ki 100.0 1.8E-44 6.1E-49 327.6 23.1 291 5-340 21-318 (330)
31 2f02_A Tagatose-6-phosphate ki 100.0 1.3E-44 4.3E-49 327.8 22.0 296 1-340 1-301 (323)
32 2v78_A Fructokinase; transfera 100.0 8E-45 2.7E-49 327.8 19.9 284 6-339 3-303 (313)
33 2dcn_A Hypothetical fructokina 100.0 2.1E-44 7.2E-49 324.7 20.2 284 5-339 2-301 (311)
34 3cqd_A 6-phosphofructokinase i 100.0 3E-44 1E-48 323.4 21.0 288 7-340 4-300 (309)
35 1v1a_A 2-keto-3-deoxygluconate 100.0 7.2E-44 2.5E-48 320.9 22.9 281 6-339 3-296 (309)
36 1tyy_A Putative sugar kinase; 100.0 1.8E-44 6E-49 328.8 16.8 285 1-339 21-322 (339)
37 4e84_A D-beta-D-heptose 7-phos 100.0 3.4E-44 1.2E-48 328.0 18.5 294 4-340 53-350 (352)
38 4gm6_A PFKB family carbohydrat 100.0 6.4E-44 2.2E-48 326.9 19.8 297 2-333 22-330 (351)
39 2hlz_A Ketohexokinase; non-pro 100.0 5.5E-43 1.9E-47 315.4 25.6 280 4-332 17-308 (312)
40 3ewm_A Uncharacterized sugar k 100.0 1.9E-43 6.7E-48 318.6 22.5 281 5-340 2-294 (313)
41 2ajr_A Sugar kinase, PFKB fami 100.0 1.6E-44 5.3E-49 328.2 14.6 293 5-340 13-318 (331)
42 3b1n_A Ribokinase, putative; r 100.0 1.2E-42 4E-47 315.1 23.5 292 6-339 2-298 (326)
43 2pkf_A Adenosine kinase; trans 100.0 9E-43 3.1E-47 316.9 22.7 297 5-339 11-312 (334)
44 2abq_A Fructose 1-phosphate ki 100.0 7.7E-43 2.6E-47 313.8 19.8 286 6-339 2-290 (306)
45 2jg5_A Fructose 1-phosphate ki 100.0 8.7E-43 3E-47 313.4 19.8 285 6-340 2-291 (306)
46 3kd6_A Carbohydrate kinase, PF 100.0 7.4E-42 2.5E-46 308.2 25.4 278 1-340 1-291 (313)
47 2qhp_A Fructokinase; NP_810670 100.0 2.3E-42 8E-47 309.2 21.3 276 4-336 3-287 (296)
48 3bf5_A Ribokinase related prot 100.0 1.7E-42 5.7E-47 311.2 16.4 270 3-339 19-293 (306)
49 2afb_A 2-keto-3-deoxygluconate 100.0 1.5E-41 5.3E-46 311.0 20.5 295 5-339 13-336 (351)
50 1vk4_A PFKB carbohydrate kinas 100.0 9.4E-39 3.2E-43 285.9 16.3 254 54-340 29-292 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 1.1E-25 3.7E-30 202.5 8.6 222 80-330 12-270 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 2.1E-24 7.3E-29 191.3 12.4 227 79-332 21-269 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 4.3E-23 1.5E-27 183.3 10.8 161 158-330 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 6.1E-21 2.1E-25 166.7 14.9 162 157-330 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.8 9.1E-20 3.1E-24 160.4 13.8 162 157-330 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.8 7.6E-20 2.6E-24 162.2 12.1 167 156-330 76-260 (289)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 9.6E-19 3.3E-23 154.3 15.9 161 157-330 74-249 (282)
58 3mbh_A Putative phosphomethylp 99.8 2E-18 6.9E-23 153.0 12.8 164 157-330 77-259 (291)
59 3zs7_A Pyridoxal kinase; trans 99.8 2.9E-18 9.8E-23 152.5 12.5 163 156-330 75-262 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.7 5.1E-16 1.7E-20 136.1 12.2 166 152-328 53-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 1.1E-14 3.6E-19 139.9 12.2 159 157-328 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.3 2.4E-11 8.1E-16 105.8 13.1 161 151-325 50-223 (265)
63 2r3b_A YJEF-related protein; p 99.0 1.2E-09 4E-14 96.9 11.6 155 153-328 107-267 (310)
64 3bgk_A SMU.573, putative uncha 99.0 6E-10 2.1E-14 98.9 9.6 156 153-328 121-284 (311)
65 3dzv_A 4-methyl-5-(beta-hydrox 98.9 2.2E-08 7.4E-13 86.8 13.8 160 150-322 51-229 (273)
66 3rss_A Putative uncharacterize 98.8 1.5E-08 5.2E-13 95.4 11.4 158 152-326 315-473 (502)
67 3drw_A ADP-specific phosphofru 98.8 1.9E-07 6.6E-12 86.2 18.1 215 5-231 28-321 (474)
68 3rpz_A ADP/ATP-dependent NAD(P 98.7 2.7E-08 9.2E-13 86.7 8.3 144 155-321 96-244 (279)
69 1ua4_A Glucokinase, ADP-depend 98.5 4.1E-06 1.4E-10 77.5 15.5 163 59-230 109-303 (455)
70 3nl6_A Thiamine biosynthetic b 98.4 4.5E-06 1.5E-10 79.3 15.5 162 150-322 298-495 (540)
71 3hpd_A Hydroxyethylthiazole ki 98.4 3.2E-06 1.1E-10 72.6 12.5 159 150-320 49-218 (265)
72 1gc5_A ADP-dependent glucokina 98.3 2.4E-05 8.1E-10 72.4 15.9 163 59-230 117-316 (467)
73 1l2l_A ADP-dependent glucokina 98.2 9.4E-06 3.2E-10 74.9 12.3 74 156-230 227-306 (457)
74 3k5w_A Carbohydrate kinase; 11 97.5 0.00048 1.7E-08 64.3 10.2 148 156-325 291-444 (475)
75 3can_A Pyruvate-formate lyase- 48.3 21 0.00071 27.8 4.5 57 159-219 5-61 (182)
76 2l82_A Designed protein OR32; 44.8 80 0.0028 22.3 6.8 66 151-222 71-139 (162)
77 3vzx_A Heptaprenylglyceryl pho 44.6 74 0.0025 26.1 7.3 51 156-217 30-80 (228)
78 1ztd_A Hypothetical protein PF 40.4 28 0.00094 24.8 3.4 32 288-319 63-95 (133)
79 2orv_A Thymidine kinase; TP4A 40.3 1.5E+02 0.0053 24.3 9.4 62 153-217 86-147 (234)
80 2fcj_A Small toprim domain pro 32.9 68 0.0023 23.3 4.7 78 157-246 26-103 (119)
81 1tqx_A D-ribulose-5-phosphate 30.0 1.4E+02 0.0047 24.3 6.8 51 158-217 86-143 (227)
82 1i4n_A Indole-3-glycerol phosp 29.1 87 0.003 26.1 5.4 62 154-224 120-183 (251)
83 3tz6_A Aspartate-semialdehyde 27.8 2E+02 0.0068 25.1 7.8 92 79-196 2-96 (344)
84 2fq6_A Cystathionine beta-lyas 27.1 1.8E+02 0.0063 25.9 7.7 38 157-194 167-207 (415)
85 2j9r_A Thymidine kinase; TK1, 26.7 1.8E+02 0.006 23.5 6.7 59 157-217 101-159 (214)
86 3w01_A Heptaprenylglyceryl pho 26.6 89 0.003 25.8 4.9 51 156-217 35-85 (235)
87 3i16_A Aluminum resistance pro 26.2 1.5E+02 0.0052 26.7 7.0 38 157-194 176-220 (427)
88 3l5o_A Uncharacterized protein 25.7 31 0.0011 29.2 2.0 44 152-197 181-224 (270)
89 3jzl_A Putative cystathionine 25.6 1.2E+02 0.0042 27.1 6.2 38 157-194 159-203 (409)
90 3iwt_A 178AA long hypothetical 23.7 77 0.0026 24.5 4.0 21 90-110 39-59 (178)
91 4f3y_A DHPR, dihydrodipicolina 23.4 2.2E+02 0.0076 23.8 7.0 60 153-219 69-129 (272)
92 2lxi_A RNA-binding protein 10; 23.0 1.1E+02 0.0038 20.3 4.3 46 80-125 2-52 (91)
93 2gk4_A Conserved hypothetical 22.4 88 0.003 25.7 4.1 26 58-86 26-51 (232)
94 3ctl_A D-allulose-6-phosphate 22.1 86 0.0029 25.7 4.1 53 156-217 79-133 (231)
95 1zl0_A Hypothetical protein PA 22.0 2.2E+02 0.0074 24.5 6.8 40 155-194 14-53 (311)
96 2pv7_A T-protein [includes: ch 21.7 3.4E+02 0.012 22.7 8.1 74 84-195 24-100 (298)
97 4fn4_A Short chain dehydrogena 21.6 2.6E+02 0.0089 23.0 7.1 58 157-219 31-91 (254)
98 3v7e_A Ribosome-associated pro 21.4 1.8E+02 0.0062 19.2 5.0 36 156-194 26-61 (82)
99 2h1q_A Hypothetical protein; Z 21.4 42 0.0014 28.4 2.0 44 152-197 181-224 (270)
100 3mvn_A UDP-N-acetylmuramate:L- 20.9 2.7E+02 0.0093 20.9 9.0 49 169-217 44-97 (163)
No 1
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=1.4e-57 Score=416.87 Aligned_cols=340 Identities=39% Similarity=0.713 Sum_probs=302.4
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCC-CCc
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQI-PGA 80 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~l-g~~ 80 (341)
++..+|+++|++++|++..++++|+++|++.+|..++.+++++|.+++.....+....+||++.|+|.++++|+++ |.+
T Consensus 5 ~~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~ 84 (347)
T 3otx_A 5 SAPLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGK 84 (347)
T ss_dssp -CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTS
T ss_pred cCCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCC
Confidence 3456899999999999999999999999999999999999999999999999999999999999999999983221 588
Q ss_pred -eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 81 -TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 81 -v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++.+++|+|+++.+.+++..++++++...+.++.+++++
T Consensus 85 ~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~ 164 (347)
T 3otx_A 85 FVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESR 164 (347)
T ss_dssp SEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCS
T ss_pred eEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCC
Confidence 9999999999999999999999999999987677789999988888999988888888889998887644457889999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++|++|+.+..+++.+.++++.++++++++++|++.+.+...+++.+.++++++|++++|++|++.|++..+.+.++.++
T Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~ 244 (347)
T 3otx_A 165 IFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEE 244 (347)
T ss_dssp EEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHH
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHH
Confidence 99999988778889999999999999999999999888777677888999999999999999999999877776788999
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
+++.+.++++....+++.||||+|++|++++++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|
T Consensus 245 ~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a 324 (347)
T 3otx_A 245 IARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETG 324 (347)
T ss_dssp HHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999654321146889999999999999999998889988776555899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCCCCCCC
Q 019402 320 CYAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~~~e~~ 341 (341)
+++|+.+|++.|+++|..++++
T Consensus 325 ~~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 325 HYTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp HHHHHHHHTCC----CCSCSCC
T ss_pred HHHHHHHHcccCCCCCCCCCCC
Confidence 9999999999999999998875
No 2
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=7.6e-58 Score=421.09 Aligned_cols=338 Identities=51% Similarity=0.907 Sum_probs=299.7
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+.+|+++|++++|++..++++|+++|++.+|.+++.+..++|.+++.....+....+||++.|+|+++++|.++|.++.+
T Consensus 23 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ 102 (365)
T 3loo_A 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIF 102 (365)
T ss_dssp TTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEE
T ss_pred CccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEE
Confidence 34799999999999999999999999999999999999999999999998899999999999999999986666899999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
+|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++++++++|+++.+++++..++++++.....++.+.++|++|+
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i 182 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYV 182 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEE
Confidence 99999999999999999999999999866777899999988888898888889888999988875445567899999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+|+.+..+++.+.++++.++++|+++++|++.+.+....++.+.++++++|++++|++|++.+++....+.++++++++.
T Consensus 183 ~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~ 262 (365)
T 3loo_A 183 SGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKR 262 (365)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred eeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 99887677889999999999999999999998887777778889999999999999999999999877777899999999
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEE--eCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVA--EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~--~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.++.+....+++.||||+|++|++++ ++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 263 l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 342 (365)
T 3loo_A 263 IAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIW 342 (365)
T ss_dssp HHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 965322122478999999999999999 778888888877644589999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCCCCC
Q 019402 322 AANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~e~~ 341 (341)
+|+.+|++.|+.+|..++|+
T Consensus 343 ~Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 343 AAREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp HHHHHHHHGGGGGGSCCCC-
T ss_pred HHHHHHcCCCCCCCCCccCC
Confidence 99999999999999999875
No 3
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=1e-57 Score=420.70 Aligned_cols=338 Identities=39% Similarity=0.705 Sum_probs=304.6
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+.+|+++|++++|++..++++|+++|++.+|...+.+.+++|.+++.....+....+||++.|+|.++++|++.|.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999995444699999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeec-CCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
+|.+|+|.+|+.+++.|++.||++++++. .+.+|+.+++++++|+|+++.+.+++..++++++.....++.+.++|++|
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v~ 183 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYY 183 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEEE
Confidence 99999999999999999999999999875 67789999999888899988888888899998887644456789999999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
++|+.+.++++.+..+++.+++.|+++++|++.+.|....++.+.++++++|++++|++|++.|++....+.++++++++
T Consensus 184 ~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~ 263 (370)
T 3vas_A 184 IAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 263 (370)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHH
T ss_pred EEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHH
Confidence 99988777788999999999999999999999888777677788999999999999999999999987666678899999
Q ss_pred HHhcCCCCCCC-CccEEEEeeCCCCEEEEe--CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 243 KISQWPKASGT-HKRITVITQGADPVVVAE--DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 243 ~l~~~~~~~~~-~~~~vvvt~G~~G~~~~~--~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
.|.++++.... +++.||||+|++|+++++ +++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|
T Consensus 264 ~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~A 343 (370)
T 3vas_A 264 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 343 (370)
T ss_dssp HHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 98543211113 789999999999999998 888889998876555899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCCCCCCC
Q 019402 320 CYAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~~~e~~ 341 (341)
+++|+.+|++.|+.+|..++++
T Consensus 344 ~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 344 VKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp HHHHHHHHTSSSSCCCCGGGGC
T ss_pred HHHHHHHHcccCCcCCCCccce
Confidence 9999999999999999998875
No 4
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=7.8e-56 Score=408.57 Aligned_cols=337 Identities=38% Similarity=0.692 Sum_probs=299.0
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
..|++||++++|++..+|++||++++|.+|.+++.++++.|..++..........+||++.|+|+++++|.+.+..+.|+
T Consensus 27 ~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fi 106 (372)
T 3uq6_A 27 GYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYV 106 (372)
T ss_dssp TCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999965445669999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
|.||+|.+|+++++.|++.||+++++. ..+.+|+.++++.++|+|+++.+.+++..+++++++.+..+..++.++++|+
T Consensus 107 G~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~~ 186 (372)
T 3uq6_A 107 GCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYI 186 (372)
T ss_dssp EEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEE
T ss_pred eeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEEE
Confidence 999999999999999999999999875 4566788888888899999999999999999999987666778999999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+++.+..+++.+.++++.++++++++.+|++.+.+....++.+.++++++|++++|++|++.|++......++.+++++.
T Consensus 187 ~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~ 266 (372)
T 3uq6_A 187 AGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARY 266 (372)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHH
T ss_pred ecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHH
Confidence 99877667788999999999999999999998887777788899999999999999999999999887777788888888
Q ss_pred HhcCCC-CCCCCccEEEEeeCCCCEEEEeCCe--EEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 244 ISQWPK-ASGTHKRITVITQGADPVVVAEDGK--VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 244 l~~~~~-~~~~~~~~vvvt~G~~G~~~~~~~~--~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+.++.. ....+.+.+|||+|++|++++.++. ...++.++.+..++||||||||+|+|||+|+|++|+++++|+++|+
T Consensus 267 l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a~ 346 (372)
T 3uq6_A 267 IADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAV 346 (372)
T ss_dssp HHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 876432 1245678999999999999987653 3445555555568999999999999999999999999999999999
Q ss_pred HHHhhhhhhccccCCCCCCCC
Q 019402 321 YAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 321 ~~aa~~v~~~g~~~p~~~e~~ 341 (341)
++|+.+|++.|+++|..++++
T Consensus 347 ~aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 347 KAAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp HHHHHHHTSSSSCCCCGGGCC
T ss_pred HHHHHHHcCCCCCCCChhHHH
Confidence 999999999999999988764
No 5
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=8.1e-53 Score=385.10 Aligned_cols=338 Identities=57% Similarity=1.008 Sum_probs=294.9
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCC-CceE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIP-GATS 82 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg-~~v~ 82 (341)
.++|+++|++++|++..++.+++++|++.+|...+.+..+.|.+++.....+....+||++.|+|.++++|.+.+ .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 458999999999999999998999999999999998888899999999999999999999999999999842222 8999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcc-cCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.+++..++++ ++......+.++++|++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 165 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVC 165 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEE
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCEE
Confidence 99999999999999999999999999987666789999988888888887777888888888 77643344668899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
|++++.+.++++.+..+++.+++.++++++|++.+.+.....+.+.++++++|++++|++|++.|++....+.+++++++
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 245 (345)
T 1bx4_A 166 YIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 245 (345)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHH
Confidence 99998777788999999999999999999999877765555666788999999999999999999987655667889999
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.+.++++....+++.||||+|++|++++++++.+++|++++++.+++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 246 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 325 (345)
T 1bx4_A 246 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHY 325 (345)
T ss_dssp HHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99843210001478999999999999999888888888876544578999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCCCCC
Q 019402 322 AANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~e~~ 341 (341)
+|+.++++.|+.+|+.+++.
T Consensus 326 ~aa~~v~~~G~~~p~~~~~~ 345 (345)
T 1bx4_A 326 AASIIIRRTGCTFPEKPDFH 345 (345)
T ss_dssp HHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHhccCCCCCCcccCC
Confidence 99999999999999988874
No 6
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=5.1e-50 Score=371.35 Aligned_cols=329 Identities=33% Similarity=0.539 Sum_probs=278.5
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.++++|+|+|++++|++..++.+++.++++..|...+...++.|..++. +.......+||++.|+|.++++|...|.++
T Consensus 30 ~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v 108 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSA 108 (383)
T ss_dssp CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTTSE
T ss_pred CCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCCcE
Confidence 3466999999999999999998899999999999888877778888888 888899999999999999999955335999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.+++..++++. ...+.+.+++++
T Consensus 109 ~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~~----~~~~~l~~~~~v 184 (383)
T 2abs_A 109 GYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPE----DWTTFASGALIF 184 (383)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCT----THHHHTTTCCEE
T ss_pred EEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChhh----hhHHHhhcCCEE
Confidence 9999999999999999999999999999876667899999888888888877777777777652 234568899999
Q ss_pred EEeccccccCHHHHHHHHHHHHh-cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCC-------
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAA-KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWE------- 233 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~------- 233 (341)
|++++.+.++++.+..+++.+++ .++++++|++.+.|.....+.+.++++++|++++|++|++.|++.....
T Consensus 185 ~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~ 264 (383)
T 2abs_A 185 YATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTAL 264 (383)
T ss_dssp EEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-------
T ss_pred EEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccccccccc
Confidence 99998877788999999999999 8999999998877765556677889999999999999999998765322
Q ss_pred -----CCCHHHHHHHHhcCCCCCCC-CccEEEEeeCCCCEEEE-----eCCeEEEEecccCCCCcccCCCCcchhhHHHH
Q 019402 234 -----TDNVEEIALKISQWPKASGT-HKRITVITQGADPVVVA-----EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 234 -----~~~~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~~~~-----~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~ 302 (341)
.++.+++++.+.++.+.... +++.||||+|++|++++ .+++.+++++++++..+++|||||||+|+|||
T Consensus 265 s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~ 344 (383)
T 2abs_A 265 STANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGF 344 (383)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHHH
Confidence 23456677777321000013 78899999999999998 56677788876654457899999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhhhhhccccCC
Q 019402 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 335 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~~p 335 (341)
+++|++|+++++|+++|+++|+.+|++.|+.+|
T Consensus 345 ~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 345 LYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 999999999999999999999999999999877
No 7
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.7e-49 Score=363.41 Aligned_cols=309 Identities=27% Similarity=0.396 Sum_probs=268.0
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++..+++.|+.++++.+|...+.+.++....... .......+||++.|+|.++++ +| .++.+
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~--~~~~~~~~GG~~~N~A~~la~-LG--~~~~~ 99 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSR--MGPALEASGGSAGNTAAGVAN-LG--GKAAY 99 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHH--SCSCEEEECCHHHHHHHHHHH-HT--CCEEE
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHH--hhhccEecCCHHHHHHHHHHH-cC--CCeEE
Confidence 57999999999999999999999999999999888876443222221 135578999999999999998 45 99999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+|+++.+.+++..++++++.. +.+++++++
T Consensus 100 ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~~~v 175 (352)
T 4e3a_A 100 FGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA----DVVADAKVT 175 (352)
T ss_dssp ECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHHTEEEE
T ss_pred EEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH----HHHhhCCEE
Confidence 9999999999999999999999999985 45668999999887 79999888888888899888874 678999999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 162 YIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
|++|+.+ +.+.+.+..+++.+++.+.++++|++.+.+....++.+.++++ ++|++++|++|++.|++ .++.
T Consensus 176 ~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g-----~~~~ 250 (352)
T 4e3a_A 176 YFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ-----TDDF 250 (352)
T ss_dssp EEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT-----CSCH
T ss_pred EEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC-----CCCH
Confidence 9999863 3345789999999999999999999877665556677888998 89999999999999987 3577
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
+++++.+. .+++.||||+|++|++++++++.+++|+++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 251 ~~a~~~l~-------~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~a~~ 321 (352)
T 4e3a_A 251 EEALNRIA-------ADCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLEDCGK 321 (352)
T ss_dssp HHHHHHHH-------HHSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHh-------cCCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 88888873 25789999999999999999999999987652 4899999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCC
Q 019402 318 TGCYAANVVIQRSGCTYP 335 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p 335 (341)
+|+++|+.+|++.|+..+
T Consensus 322 ~A~~aAa~~v~~~G~~~~ 339 (352)
T 4e3a_A 322 LGCLAAGIVIQQIGPRPM 339 (352)
T ss_dssp HHHHHHHHHTTSSSSSCS
T ss_pred HHHHHHHHHHcCCCCCCC
Confidence 999999999999999643
No 8
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=8.7e-50 Score=358.80 Aligned_cols=295 Identities=20% Similarity=0.253 Sum_probs=255.8
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHh-ccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELA-SKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
||++|+++|++++|++..++ ++|.+++.. ...+....+||++.|+|.++++ + |.++
T Consensus 1 Mm~~v~viG~~~~D~~~~~~--------------------~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~-l--G~~~ 57 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVE--------------------RYAQPGETLHVEEAQKAFGGGKGANQAIATAR-M--QADT 57 (304)
T ss_dssp -CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSSCCEEEEECHHHHHHHHHHH-T--TCEE
T ss_pred CCCcEEEEccceeEEEEecc--------------------CCCCCCCceecccceeecCCCHHHHHHHHHHH-C--CCCe
Confidence 35699999999999999987 678888777 7788999999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+++++.+.+++..+++++++. ..+.++++|
T Consensus 58 ~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~ 135 (304)
T 3ry7_A 58 TFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVIN--AKDAIINAD 135 (304)
T ss_dssp EEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHT--THHHHHTCS
T ss_pred EEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHH--HHHHhccCC
Confidence 999999999999999999999999999985 56778999999987 58998888888878888877654 345688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+++.+++.+.++++|+.... +...++++++|++++|++|++.+++....+.++.++
T Consensus 136 ~v~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 206 (304)
T 3ry7_A 136 FVVAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKD 206 (304)
T ss_dssp EEEEET---TSCHHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHH
T ss_pred EEEEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHH
Confidence 999975 56788999999999999999999997531 235678899999999999999999754433345677
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC-CCHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE-KPVEDCVRT 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g-~~~~~a~~~ 318 (341)
+++++ ...+++.++||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++| +++++|+++
T Consensus 207 ~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~ 277 (304)
T 3ry7_A 207 NANYF------LSIGIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDF 277 (304)
T ss_dssp HHHHH------HHTTCCEEEEECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHH
T ss_pred HHHHH------HHcCCCEEEEEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 88888 456789999999999999999888999988765 78999999999999999999999 999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|+.++++.|+. +|+.+|+
T Consensus 278 A~~~aa~~~~~~G~~~~~p~~~ev 301 (304)
T 3ry7_A 278 GNKASSLTVQKHGAQASIPLLEEV 301 (304)
T ss_dssp HHHHHHTTSCCCCTGGGCCCHHHH
T ss_pred HHHHHHHHhCCCCccccCCCHHHH
Confidence 999999999999994 6887664
No 9
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=3.2e-48 Score=349.41 Aligned_cols=297 Identities=22% Similarity=0.312 Sum_probs=249.9
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++..++ ++|.+++.....+....+||++.|+|.++++ +| .+
T Consensus 1 m~~~~~v~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~-lG--~~ 57 (309)
T 1rkd_A 1 MQNAGSLVVLGSINADHILNLQ--------------------SFPTPGETVTGNHYQVAFGGKGANQAVAAGR-SG--AN 57 (309)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCCCEEEEEECHHHHHHHHHHH-HT--CE
T ss_pred CCCCCeEEEECcceEeEEEecC--------------------CCCCCCCeeecCceeecCCCHHHHHHHHHHh-CC--Cc
Confidence 7677899999999999999887 5777777777788899999999999999998 45 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+++++.+.+++..++++++.. ..+.+.++
T Consensus 58 ~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 135 (309)
T 1rkd_A 58 IAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANA 135 (309)
T ss_dssp EEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHC
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHH--HHHhcccC
Confidence 9999999999999999999999999999885 46678999999887 58888877777777777776643 23467899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
|++++++ ..+.+.+..+++.+++.+.++++|+.... ....++++++|++++|++|++.|++....+.++++
T Consensus 136 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 1rkd_A 136 SALLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAA 206 (309)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHH
T ss_pred CEEEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccc------cchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHH
Confidence 9999975 45678889999999999999999997531 12345788999999999999999875332223466
Q ss_pred HHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 239 EIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
++++.+ ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|+++
T Consensus 207 ~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~ 277 (309)
T 1rkd_A 207 KAAQVL------HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRF 277 (309)
T ss_dssp HHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHhCCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 777777 456789999999999999998888888887655 78999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|+.++++.|+. +|+.+|+
T Consensus 278 a~~~aa~~~~~~G~~~~~p~~~ev 301 (309)
T 1rkd_A 278 AHAAAAIAVTRKGAQPSVPWREEI 301 (309)
T ss_dssp HHHHHHHHHTSSSSGGGCCCHHHH
T ss_pred HHHHHHHHcCCCCccCCCCCHHHH
Confidence 999999999999984 7776553
No 10
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1.1e-47 Score=348.93 Aligned_cols=299 Identities=23% Similarity=0.300 Sum_probs=250.0
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++..++ ++|.+++..........+||++.|+|.+|++ + |.+
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 77 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTS--------------------RLPKTGETIHGHKFFIGFGGKGANQCVQAAR-L--GAM 77 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred ccccCCEEEECcccEEEEEecC--------------------CCCCCCceEecCceEECcCCHHHHHHHHHHH-C--CCC
Confidence 5566799999999999999887 5777777777778889999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+++++.+.+++..++++++.. ..+.+..+
T Consensus 78 ~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~ 155 (331)
T 2fv7_A 78 TSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRA 155 (331)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHC
T ss_pred eEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHH--HHHhhccC
Confidence 9999999999999999999999999999885 46678999999887 58888877777776777766542 23457889
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
|++++++ ..+.+.+..+++.+++.++++++|+.... .....++++++|++++|++|++.|++....+.++++
T Consensus 156 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~ 227 (331)
T 2fv7_A 156 KVMVCQL---EITPATSLEALTMARRSGVKTLFNPAPAI-----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAG 227 (331)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC-----TTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHH
T ss_pred CEEEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCccc-----ccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHH
Confidence 9999975 45668889999999999999999997531 122345778999999999999999875433334566
Q ss_pred HHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC--eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC--CCHHH
Q 019402 239 EIALKISQWPKASGTHKRITVITQGADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE--KPVED 314 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~--~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g--~~~~~ 314 (341)
++++.+ ...|++.||||+|++|+++++++ +.+++|++++ +++|||||||+|+|+|+++|++| +++++
T Consensus 228 ~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~~~ 298 (331)
T 2fv7_A 228 EAALVL------LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLED 298 (331)
T ss_dssp HHHHHH------HTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred HHHHHH------HHcCCCEEEEEECCCceEEEECCCCceeEecCCCC---ccCCCCCchHHHHHHHHHHHHhCCCCCHHH
Confidence 778888 56688999999999999998877 7788887654 88999999999999999999999 99999
Q ss_pred HHHHHHHHHhhhhhhccc--cCCCCCCCC
Q 019402 315 CVRTGCYAANVVIQRSGC--TYPPKPEFN 341 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~--~~p~~~e~~ 341 (341)
|+++|+++|+.++++.|+ .+|+.+|++
T Consensus 299 a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 327 (331)
T 2fv7_A 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDLP 327 (331)
T ss_dssp HHHHHHHHHHHHHTSSSGGGGCCCGGGSC
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCHHHHh
Confidence 999999999999999998 578888763
No 11
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.1e-46 Score=342.98 Aligned_cols=295 Identities=19% Similarity=0.233 Sum_probs=234.0
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++...+ ++..........+||++.|+|.+|++ + |.+
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 74 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRP-------------------------GPLEHAEAFHKRTAGAETNVAIGLAR-L--GLK 74 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred cCCCCCEEEEChhhhhccCCCC-------------------------CccchhhheeecCCCHHHHHHHHHHh-C--CCc
Confidence 5566799999999999997543 33456677889999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-e--cccccccCCcccCCCchhHhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-A--NLSAANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..+ +|+++.+ . ..++...++++++.. +.+
T Consensus 75 ~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l 150 (336)
T 4du5_A 75 VGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWL 150 (336)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHh
Confidence 9999999999999999999999999999985 56678999888886 5755543 2 246667788877764 578
Q ss_pred hcceEEEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCCc--HHHHh--hhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 156 EKAKYYYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLSA--PFICE--FFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~~--~~~~~--~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+++++++++++.+..+ .+.+.++++.+++.+.++++|+.. ..|.. ...+.+.++++++|++++|++|++.|++
T Consensus 151 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g 230 (336)
T 4du5_A 151 LSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG 230 (336)
T ss_dssp TTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC
T ss_pred ccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC
Confidence 8999999999765333 367789999999999999999962 22211 1345678899999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhc
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 308 (341)
.++.+++++.+ ...|++.||||+|++|++++++++.+++|+++++ +++||+||||+|+|||+++|++
T Consensus 231 -----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~--~vvdttGAGDaf~a~~~~~l~~ 297 (336)
T 4du5_A 231 -----ETTPEGVARFY------RQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVA--EVVDTVGAGDGFAVGVISALLD 297 (336)
T ss_dssp -----CCSHHHHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---------CHHHHHHHHHHHHHHT
T ss_pred -----CCCHHHHHHHH------HhcCCCEEEEEecCCceEEEECCeEEEeCCccCC--CCCCCccchHHHHHHHHHHHHc
Confidence 35788889988 5567899999999999999999999999887662 3899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 309 EKPVEDCVRTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 309 g~~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++++|+++|+++|+.+|++.|+. +|+.+|+
T Consensus 298 g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 298 GLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp TCCHHHHHHHHHHHHHHHHC------CCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 9999999999999999999999984 8887664
No 12
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2.1e-47 Score=348.22 Aligned_cols=296 Identities=22% Similarity=0.258 Sum_probs=232.1
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++...+ ..|.. .......+||++.|+|.+|++ +| .+
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~--------------------~~~~~-----~~~~~~~~GG~~~NvA~~la~-LG--~~ 52 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPL--------------------VKKGM-----PRAFLQCAGGAPANVAVAVAR-LG--GA 52 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCC--------------------SSTTS-----CCCEEEEEECHHHHHHHHHHH-HT--CC
T ss_pred CCCCCCEEEEChhhhheeccCC--------------------CCccc-----hhceeecCCChHHHHHHHHHh-CC--CC
Confidence 8999999999999999998776 23332 577889999999999999998 45 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|++..+. +++..++++++.. +.++
T Consensus 53 ~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~ 128 (338)
T 3ljs_A 53 VQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD----ASFS 128 (338)
T ss_dssp EEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH----HHHH
T ss_pred EEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH----hHhc
Confidence 9999999999999999999999999999885 46778999998887 5888865543 5666788887764 5688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
++|++|++++.+ ..+.+.+..+++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|++.|++..
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 208 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTL 208 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHH
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCC
Confidence 999999998764 2345788999999999999999998532 221 1235667889999999999999999998854
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC-
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g- 309 (341)
.. ..+++++.| ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 209 ~~---~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~ 276 (338)
T 3ljs_A 209 AA---DANAVIQQL------WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQF 276 (338)
T ss_dssp TS---CHHHHHHHH------TTTTCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHC
T ss_pred Ch---hHHHHHHHH------HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCC
Confidence 21 223478888 667899999999999999999988899988765 89999999999999999999999
Q ss_pred -------------CCHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 310 -------------KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 310 -------------~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 277 ~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev 322 (338)
T 3ljs_A 277 DDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEV 322 (338)
T ss_dssp SSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCCCTTHHHHH
T ss_pred CcccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 89999999999999999999998 46776553
No 13
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=8.5e-48 Score=344.86 Aligned_cols=277 Identities=19% Similarity=0.238 Sum_probs=242.3
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+| +|+|+|++++|++..++ ++|.+++.....+....+||++.|+|.++++ + |.+
T Consensus 1 M~~--~i~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-l--G~~ 55 (299)
T 3ikh_A 1 MSL--RVYVTGNITVDETWSIP--------------------DIPKKGASIHGVKVSQDIGGKGANQAIILSR-C--GIE 55 (299)
T ss_dssp -CC--CEEEECCCEEEEEEECS--------------------SCCCTTCEEECEEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred CCc--eEEEECceEEEEEEecC--------------------CCCCCCCeEEeeeeeeccCCHHHHHHHHHHH-C--CCC
Confidence 554 89999999999999987 6788888888888899999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++.++ +|+|+++.+.+++..++++++.. ..+.+.++|
T Consensus 56 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~ 133 (299)
T 3ikh_A 56 TRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIP--HMADAVAGD 133 (299)
T ss_dssp EEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTC
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHH--HHhhhccCC
Confidence 999999999999999999999999999998766778999998887 68998887778777888876643 234678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+++.+++.+.++++|+.... +.+.++++++|++++|++|++.|++
T Consensus 134 ~v~~~g---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g----------- 193 (299)
T 3ikh_A 134 ILLQQG---NFSLDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNESEAELLQP----------- 193 (299)
T ss_dssp EEEECS---CSCHHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEHHHHHHHCC-----------
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecHHHHHHHhc-----------
Confidence 999987 45678999999999999999999997542 3466789999999999999988753
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHH-HHHHHHhcCCCHHH-HHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG-GFLSQLVQEKPVED-CVR 317 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a-~~~~~l~~g~~~~~-a~~ 317 (341)
.+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+| +|+++|++|+++++ |++
T Consensus 194 -------------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~ 257 (299)
T 3ikh_A 194 -------------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALA 257 (299)
T ss_dssp -------------CSCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred -------------CCCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2578999999999999998888889988765 78999999999999 99999999999999 999
Q ss_pred HHHHHHhhhhhhcccc--CCCCCCC
Q 019402 318 TGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+|+++|+.+|++.|+. +|+.+|+
T Consensus 258 ~a~~~aa~~v~~~G~~~~~p~~~ev 282 (299)
T 3ikh_A 258 HASRAAAITVSRRGTLSAFPGSREL 282 (299)
T ss_dssp HHHHHHHHHHHSSSSTTTSCCHHHH
T ss_pred HHHHHHHHHhCCCcccccCCCHHHH
Confidence 9999999999999984 6877654
No 14
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1e-46 Score=340.97 Aligned_cols=290 Identities=22% Similarity=0.318 Sum_probs=233.5
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCC--
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIP-- 78 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg-- 78 (341)
|+|+++|+|+|++++|++... ......+||++.|+|.++++ ||
T Consensus 1 m~m~~~i~viG~~~~D~~~~~--------------------------------~~~~~~~GG~~~NvA~~la~---LG~~ 45 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKG--------------------------------ADVKRGFGGDTLNTSVYIAR---QVDP 45 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHT---TSCT
T ss_pred CCccCceeeechhhhhhccCC--------------------------------CceEEecCChHHHHHHHHHH---cCCC
Confidence 888889999999999998532 34578999999999999998 45
Q ss_pred --CceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeeccccc---ccCCcccCCCchh
Q 019402 79 --GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAA---NCYKSEHLKRPEI 151 (341)
Q Consensus 79 --~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~---~~~~~~~~~~~~~ 151 (341)
.++.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|+++.+.+.. ..+++++++ +.
T Consensus 46 ~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~ 123 (319)
T 3lhx_A 46 AALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSA--AI 123 (319)
T ss_dssp TTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHH--HH
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchh--hH
Confidence 799999999999999999999999999999985 45668999988886 6899887665432 234433332 23
Q ss_pred HhhhhcceEEEEeccccc-c---CHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHH
Q 019402 152 WSIVEKAKYYYIAGFFLT-V---SPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~-~---~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.+.++++|++|++++.+. + +.+.+.++++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|+
T Consensus 124 ~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~ 203 (319)
T 3lhx_A 124 CEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDE 203 (319)
T ss_dssp HHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHH
Confidence 467889999999987642 2 33688999999999999999999632 221 223456788999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEE-EEecccCCCCcccCCCCcchhhHHHH
Q 019402 224 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVK-LFPVILLPKEKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~-~v~~~~~~~~~vvdttGAGDaf~a~~ 302 (341)
+.+++ .++.+++++.+ .+.|++.||||+|++|++++++++.+ ++|++++++++++|||||||+|+|||
T Consensus 204 ~~l~g-----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 272 (319)
T 3lhx_A 204 DALWG-----QQPVEDVIART------HNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGY 272 (319)
T ss_dssp HHHHC-----CCCHHHHHHHH------HHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred HHHhC-----CCCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHH
Confidence 99987 35788899998 55688999999999999999877654 88876444568999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhhhhhccccCCCCC
Q 019402 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKP 338 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~~p~~~ 338 (341)
+++|++|+++++|+++|+++|+.+|++.|+.+|...
T Consensus 273 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 273 LAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREA 308 (319)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSCCGGG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhccCCCcCCCCC
Confidence 999999999999999999999999999999877543
No 15
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=2.2e-47 Score=343.68 Aligned_cols=276 Identities=21% Similarity=0.238 Sum_probs=240.1
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+||++|+++|++++|++..++ ++|.+++..........+||++.|+|.+|++ | |.+
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 72 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVD--------------------ALPRPGETVLAASLTRTPGGKGANQAVAAAR-A--GAQ 72 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH-T--TCE
T ss_pred ccccCCEEEECCceEEEEEecC--------------------CCCCCCCeEEecceeecCCCHHHHHHHHHHH-C--CCC
Confidence 4578899999999999999987 6788888888888999999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++.++ +|+|+++.+.+++..++ ++ .+.++++|
T Consensus 73 ~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-----~~~l~~~~ 145 (310)
T 3go6_A 73 VQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-----PSAVANCD 145 (310)
T ss_dssp EEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-----TTTTTTCS
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-----HHHhhcCC
Confidence 999999999999999999999999999998666678999999987 68998888777776666 23 25688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+++.+++.+.++++|+....+ .++.+.++++++|++++|++|++.|++.
T Consensus 146 ~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~~Ea~~l~g~---------- 209 (310)
T 3go6_A 146 VLLTQL---EIPVATALAAARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANEHEANDWPSP---------- 209 (310)
T ss_dssp EEEECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEHHHHHHSSSC----------
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCHHHHHHHhCC----------
Confidence 999986 467789999999999999999999975432 3455778899999999999999887541
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhc----CCCHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ----EKPVEDC 315 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~----g~~~~~a 315 (341)
++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++ |+++++|
T Consensus 210 ---------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a 271 (310)
T 3go6_A 210 ---------------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA 271 (310)
T ss_dssp ---------------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHH
T ss_pred ---------------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHH
Confidence 46899999999999999999999988765 7899999999999999999999 9999999
Q ss_pred HHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 272 ~~~A~~~aa~~v~~~G~~~~~p~~~ev 298 (310)
T 3go6_A 272 LRRACAAGALATLVSGVGDCAPAAAAI 298 (310)
T ss_dssp HHHHHHHHHHHTTSSCSTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 99999999999999999 57887664
No 16
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1e-46 Score=343.92 Aligned_cols=286 Identities=19% Similarity=0.185 Sum_probs=244.4
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++..++ ++|..++..........+||++.|+|.++++ | |.++.+
T Consensus 29 ~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~ 85 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVA--------------------DMPKGEGKVLPYEVLQIAEGMASSAAYAVHR-M--GGRASL 85 (343)
T ss_dssp CCEEEEESCCEEEEEEECS--------------------SCCCSSSCCCCSEEEEEEECHHHHHHHHHHH-T--TCEEEE
T ss_pred CCeEEEECcceEEEEeecC--------------------CCCCCCCeEeeeeeEEcCCcHHHHHHHHHHH-c--CCceEE
Confidence 4589999999999999887 4666666666777889999999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+|+++.+.+++..++++++. .+.+.++|++
T Consensus 86 i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~----~~~l~~~~~v 161 (343)
T 2rbc_A 86 WGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT----PEDIALFDAV 161 (343)
T ss_dssp ECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC----HHHHTTCSEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc----HhhhCCCCEE
Confidence 9999999999999999999999999985 46678999998887 6888887677766667666654 2567899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHh-hCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEK-ALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
|+++. .++.+..+++.+++.++++++|+... .+.+.+ +++++|++++|++|++.|++ .++++++
T Consensus 162 ~~~~~----~~~~~~~~~~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~~Ea~~l~g-----~~~~~~~ 226 (343)
T 2rbc_A 162 LVDVR----WPELALDVLTVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSEPAATRLTG-----LETVKDM 226 (343)
T ss_dssp EECSS----SHHHHHHHHHHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEHHHHHHHHC-----CSSHHHH
T ss_pred EEcCC----CHHHHHHHHHHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCHHHHHHHcC-----CCCHHHH
Confidence 99874 24678899999999999999999642 244666 89999999999999999986 3468888
Q ss_pred HHHHhcCCCCCCCCc-cEEEEeeCCCCEEEEeCC--eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 241 ALKISQWPKASGTHK-RITVITQGADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~--~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
++.+ ...++ +.||||+|++|+++++++ +.+++|++++ +++|||||||+|+|+|+++|++|+++++|++
T Consensus 227 ~~~l------~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~ 297 (343)
T 2rbc_A 227 LPVL------HARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV---EAVDTLAAGDIFHGTFALAMAEGMQSRAAVR 297 (343)
T ss_dssp HHHH------HHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHH------HHhCCCceEEEEECCcceEEEeCCCceeEEecCCCC---ccccCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8888 45577 899999999999999877 7888887655 7999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcccc--CCCCCCC
Q 019402 318 TGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+|+++|+.++++.|+. +|+.+|+
T Consensus 298 ~A~~~aa~~v~~~G~~~~~p~~~ev 322 (343)
T 2rbc_A 298 LSSVAAALKCTVFGGRIGAPTREET 322 (343)
T ss_dssp HHHHHHHHHHTSSSGGGGCCCHHHH
T ss_pred HHHHHHHHHhCCCCCccCCCCHHHH
Confidence 9999999999999985 6776553
No 17
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=7.5e-47 Score=343.13 Aligned_cols=294 Identities=17% Similarity=0.196 Sum_probs=242.8
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.++++|+|+|++++|++...+ ..|.+++.... .....+||++.|+|.+|++ | |.++
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~--------------------~~~~~g~~~~~-~~~~~~GG~~~NvA~~la~-L--G~~v 59 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSK--------------------ASYRPYNSTPG-HVKISFGGVCRNIAENMAR-V--GVNT 59 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEES--------------------SCCCTTSEEEE-EEEEEEECHHHHHHHHHHH-T--TCCE
T ss_pred CCCCcEEEECcEEeeeeeccC--------------------CCCCCCCCceE-EEEEccCcHHHHHHHHHHH-c--CCCc
Confidence 347799999999999999887 46666665554 6788999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-ecccccccCCcccCCCchhHhhhhcc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|++.+. ..++....++++.+.. ..+.+..+
T Consensus 60 ~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 137 (328)
T 3kzh_A 60 NFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDS--KREIFENA 137 (328)
T ss_dssp EEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHH--THHHHHTC
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHH--HHHhhccC
Confidence 999999999999999999999999999874 56778999999987 5888763 3455555666655432 34578899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
+++++++. .+ +.+..+++ +++.+.++++|+..... .+.+.++++++|++++|++|++.+++....+.++.+
T Consensus 138 ~~~~~~~~---~~-~~~~~l~~-a~~~~~~v~~D~~~~~~----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~ 208 (328)
T 3kzh_A 138 EYTVLDSD---NP-EIMEYLLK-NFKDKTNFILDPVSAEK----ASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLI 208 (328)
T ss_dssp SEEEEESS---CH-HHHHHHHH-HHTTTSEEEEECCSHHH----HHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHH
T ss_pred CEEEEeCC---cH-HHHHHHHH-HhhcCCcEEEEeCCHHH----HHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHH
Confidence 99999873 33 67777777 88899999999976542 234567888999999999999999985544344567
Q ss_pred HHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 239 EIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
++++.+ .+.+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++
T Consensus 209 ~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~ 279 (328)
T 3kzh_A 209 KASNYF------LGLGIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKF 279 (328)
T ss_dssp HHHHHH------HHHTCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHhCCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 778888 455789999999999999998888888887765 79999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e 339 (341)
|+++|+.+|++.|+. .|+.+|
T Consensus 280 A~a~aa~~v~~~G~~~~~~~~~~ 302 (328)
T 3kzh_A 280 AMTMSNITISHEETIHPDMALDT 302 (328)
T ss_dssp HHHHHHHHHTSSSSSCTTCSHHH
T ss_pred HHHHHHHHhcCCCCCCCcCCHHH
Confidence 999999999999985 455443
No 18
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=3.3e-47 Score=345.75 Aligned_cols=295 Identities=16% Similarity=0.161 Sum_probs=236.8
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+||++|+++|++++|++...+. .+...........+||++.|+|.++++ + |.++
T Consensus 1 m~m~~i~viG~~~~D~~~~~~~-----------------------~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 54 (330)
T 3iq0_A 1 MSLSKVFTIGEILVEIMASKIG-----------------------QPFDQPGIWNGPYPSGAPAIFIDQVTR-L--GVPC 54 (330)
T ss_dssp ---CEEEEESCCEEEEEEEEET-----------------------CCSSSCEEEEEEEEECHHHHHHHHHHH-T--TCCE
T ss_pred CCCCCEEEEcceeEEEeccCCC-----------------------CCccccccccCcCCCCHHHHHHHHHHH-C--CCcE
Confidence 0567999999999999985321 011111112356899999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-ec-ccccccCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-AN-LSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|++++. .. .++...++++++.. ..+++
T Consensus 55 ~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~ 130 (330)
T 3iq0_A 55 GIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE----NILKD 130 (330)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG----GGGTT
T ss_pred EEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH----hHhcc
Confidence 999999999999999999999999999985 56778999998887 6888443 22 34556678777764 56889
Q ss_pred ceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHH--HH-hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 158 AKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPF--IC-EFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 158 ~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~--~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
++++|++++.+ ..+.+.+.++++.+++.++++++|+.... |. ....+.+.++++++|++++|++|++.+++
T Consensus 131 ~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g---- 206 (330)
T 3iq0_A 131 CTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSP---- 206 (330)
T ss_dssp EEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCS----
T ss_pred CCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhC----
Confidence 99999999865 22346788999999999999999996432 22 12345677889999999999999998876
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
.++++++++.| ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++
T Consensus 207 -~~~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~ 276 (330)
T 3iq0_A 207 -HSTPERAIAGF------LEEGVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFDA 276 (330)
T ss_dssp -CSSHHHHHHHH------HHHTCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred -CCCHHHHHHHH------HHcCCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCH
Confidence 35788888888 456789999999999999998888889988765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 313 EDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 313 ~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
++|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 277 ~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 306 (330)
T 3iq0_A 277 HRALQYANACGALAVTRRGPMEGTSRLMEI 306 (330)
T ss_dssp HHHHHHHHHHHHHHTTSCSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 99999999999999999999 57876654
No 19
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=7.7e-46 Score=336.04 Aligned_cols=299 Identities=21% Similarity=0.314 Sum_probs=237.1
Q ss_pred CCC-cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC
Q 019402 1 MAY-EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG 79 (341)
Q Consensus 1 m~~-~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~ 79 (341)
|+| +++|+|+|++++|++....... ....+.+| ..+....+||++.|+|.+|++ + |.
T Consensus 1 m~m~~~~v~~iG~~~~D~~~~~~~~~------------~~~~~~~p-------~~~~~~~~GG~~~NvA~~la~-L--G~ 58 (325)
T 3h49_A 1 MSLDNLDVICIGAAIVDIPLQPVSKN------------IFDVDSYP-------LERIAMTTGGDAINEATIISR-L--GH 58 (325)
T ss_dssp ----CEEEEEESCCEEEEEECSCCGG------------GGGSSCCC-------CSCCCCEEESHHHHHHHHHHH-T--TC
T ss_pred CCCCCCeEEEEChhhheeeccCCCCc------------cccccccc-------hheeEEccCcHHHHHHHHHHH-C--CC
Confidence 776 5699999999999976432100 00111222 246678999999999999998 4 59
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeeccc-ccccCCcccCCCchhHhhhh
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLS-AANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 156 (341)
++.++|.+|+|.+|+++++.|++.||+++++. ..+.+|+.++++++ +|+|+++...+ +...++++++.. +.+.
T Consensus 59 ~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~ 134 (325)
T 3h49_A 59 RTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF----ARFS 134 (325)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG----GGGG
T ss_pred CeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh----hhhc
Confidence 99999999999999999999999999999985 46678999998887 68998876654 334567766653 5688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEe-CCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCC
Q 019402 157 KAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMN-LSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWE 233 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d-~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~ 233 (341)
+++++|++++.. ..+.+.+.++++.+++++..++.+ ++...|. ..+.+.++++++|++++|++|++.|++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g----- 207 (325)
T 3h49_A 135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTG----- 207 (325)
T ss_dssp GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHT-----
T ss_pred cCCEEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhC-----
Confidence 999999998653 234578899999999998544332 3332221 234467889999999999999999987
Q ss_pred CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHH
Q 019402 234 TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVE 313 (341)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~ 313 (341)
.++.+++++.+ ...|++.||||+|++|++++++++.+++|++++ ++++|||||||+|+|||+++|++|++++
T Consensus 208 ~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~ 279 (325)
T 3h49_A 208 KETLDEIADCF------LACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLR 279 (325)
T ss_dssp CSSHHHHHHHH------HTTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHH------HHcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHH
Confidence 34678888888 567889999999999999999998888887653 2789999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 314 DCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 314 ~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 280 ~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 280 ECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp HHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 9999999999999999997 47877654
No 20
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=7e-47 Score=343.17 Aligned_cols=294 Identities=17% Similarity=0.226 Sum_probs=227.6
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+++|++++|++...+ ..|. .+.......+||++.|+|.++++ + |.++.
T Consensus 20 ~~~~v~viG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~ 72 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEE--------------------VNSL----SQSREYTRHFGGSPANIAVNLSR-L--GKKVA 72 (327)
T ss_dssp --CCEEEESCCEEEEECCCC--------------------CSSG----GGCCEEEEEEECHHHHHHHHHHH-T--TCCEE
T ss_pred CCCCEEEEccceEEEeccCC--------------------CCCc----cccceeeeecCcHHHHHHHHHHH-c--CCcEE
Confidence 35689999999999998776 3443 25677889999999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..++|+++++.+.+++..++++++. .+.++++|++
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~v 148 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII----FELIKRSKVF 148 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH----HHHHC--CEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEecCCCccEEEecChhhhCChhhcC----HhHhccCCEE
Confidence 99999999999999999999999999985 566778888776667888887777777777766544 2568899999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHH--HH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 162 YIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPF--IC--EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~--~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+ +.+.+.+.++++.++++++++++|+.... |. ....+.+.++++++|++++|++|++.+++. +
T Consensus 149 ~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~ 223 (327)
T 3hj6_A 149 HLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----D 223 (327)
T ss_dssp EEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----S
T ss_pred EECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----C
Confidence 9998754 23457889999999999999999997432 21 113456788999999999999999999874 3
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a 315 (341)
+.+++++.+ ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|
T Consensus 224 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a 294 (327)
T 3hj6_A 224 SPENYVKRY------LELGVKAVILTLGEEGVIASDGEEIIRIPAFSE---DAVDVTGAGDAFWSGFICGLLDGYTVKRS 294 (327)
T ss_dssp CSSGGGGGG------TTTTCSEEEEECSTTCEEEECSSCEEESCSSTT---C-----CCHHHHHHHHHHTTSSCSTTHHH
T ss_pred CHHHHHHHH------HhCCCCEEEEEECCCceEEEeCCeeEEcCCccc---ccCCCcChhHHHHHHHHHHHHcCCCHHHH
Confidence 445666777 567899999999999999999888888887755 89999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccc--cCCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGC--TYPPKPEFN 341 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~--~~p~~~e~~ 341 (341)
+++|+++|+.+|++.|+ .+|+.+|++
T Consensus 295 ~~~A~a~aa~~v~~~G~~~~~p~~~ev~ 322 (327)
T 3hj6_A 295 IKLGNGVAAFKIRGVGALSPVPSKEDII 322 (327)
T ss_dssp HHHHHCCCSSCC----------------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 99999999999999998 589988864
No 21
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-46 Score=343.45 Aligned_cols=298 Identities=16% Similarity=0.172 Sum_probs=240.2
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
||++|+++|++++|++... +++.....+....+||++.|+|.+|++ + |.++.
T Consensus 1 m~~~v~viG~~~~D~~~~~-------------------------~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~ 52 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPE-------------------------YLMLEQTEQLRMNFVGTGVNLLANLAH-F--QLETA 52 (346)
T ss_dssp -CCEEEEECCCEEEEECST-------------------------TCCTTTCSCCEEEEECHHHHHHHHHHH-T--TCEEE
T ss_pred CCCcEEEeChhhhhhcCCC-------------------------CCcccccceeEEeccCHHHHHHHHHHH-c--CCCeE
Confidence 3468999999999998522 233456678899999999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeC-Ceeceeec----ccccccCCcccCCCchhHhhhhc
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG-GERSLVAN----LSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..++ ++++++.+ .++...+++++++ ..+.+++
T Consensus 53 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~ 129 (346)
T 3ktn_A 53 LITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAE 129 (346)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTT
T ss_pred EEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC---hHHHhCC
Confidence 99999999999999999999999999986566778888877664 44455554 3455567777665 2357889
Q ss_pred ceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCC--cHHHH----hhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 158 AKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLS--APFIC----EFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~--~~~~~----~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+|++|++++.+..++ +.+.++++.+++.++++++|+. ...|. ....+.+.++++++|++++|++|++.|++
T Consensus 130 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 209 (346)
T 3ktn_A 130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLG 209 (346)
T ss_dssp CSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSC
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhC
Confidence 999999997653333 6789999999999999999995 23332 22346688899999999999999999986
Q ss_pred hc-CC---CCCCHHHHHHHHhcCCCCCC-CCccEEEEeeCCCC-------EEEEeCCeEEEEecccCCCCcccCCCCcch
Q 019402 229 VH-GW---ETDNVEEIALKISQWPKASG-THKRITVITQGADP-------VVVAEDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 229 ~~-~~---~~~~~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G-------~~~~~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
.. .. +.++.+++++.| .. .|++.||||+|++| ++++++++.+++|++++ +++|||||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGD 280 (346)
T 3ktn_A 210 FIPREDLEGEAQETELIQRF------MSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGD 280 (346)
T ss_dssp CCCCTTSCHHHHHHHHHHHH------HHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHH
T ss_pred CCCCccccchHHHHHHHHHH------HHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhH
Confidence 43 11 112456777777 33 37889999999998 99988888888888766 7899999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhcccc-CCCCCCC
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT-YPPKPEF 340 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~-~p~~~e~ 340 (341)
+|+|||+++|++|+++++|+++|+++|+.++++.|+. +|+.+|+
T Consensus 281 aF~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~~p~~~ev 325 (346)
T 3ktn_A 281 AYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQV 325 (346)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCCCCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence 9999999999999999999999999999999999985 6766553
No 22
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=2.6e-45 Score=331.80 Aligned_cols=294 Identities=19% Similarity=0.238 Sum_probs=240.0
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++...+ ..|. ....+....+||++.|+|.+|++ + |.+
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 57 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQS--------------------GVGL----ADVQSFGKYLGGSAANVSVAAAR-H--GHN 57 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSS--------------------SCCG----GGCCCBCCEEECHHHHHHHHHHH-T--TCC
T ss_pred cccCCCEEEEChhheeeecccC--------------------CCCc----cccceeeecCCCcHHHHHHHHHH-C--CCc
Confidence 4556799999999999998665 3443 24577789999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cc-cccCCcccCCCchhHhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SA-ANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|++.++.+. ++ ...++++++.. +.+
T Consensus 58 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~ 133 (319)
T 3pl2_A 58 SALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSL----DDV 133 (319)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCH----HHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCH----HHh
Confidence 9999999999999999999999999999985 56778999988776 5777766553 33 45677777653 678
Q ss_pred hcceEEEEeccccccC--HHHHHHHHHHHHhcCCeEEEeCCc--HHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 156 EKAKYYYIAGFFLTVS--PESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.++|++|++++.+... .+.+..+++.+++ +.++++|+.. ..|. ....+.+.++++++|++++|++|++.+++
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g- 211 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVG- 211 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHS-
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcC-
Confidence 8999999999865332 2456666776665 5667888752 2221 12356678899999999999999999987
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
.++++++++.| ...+++.++||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 212 ----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g 278 (319)
T 3pl2_A 212 ----ETEPERAGRAL------LERGVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSE 278 (319)
T ss_dssp ----CCSHHHHHHHH------HHTTCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTT
T ss_pred ----CCCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcC
Confidence 35788888888 556789999999999999998888889988765 78999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++++|+++|+++|++++++.|+ .+|+.+|+
T Consensus 279 ~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 279 WPLEKVLRFANTAGALVASRLECSTAMPTTDEV 311 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCcCCCCCHHHH
Confidence 99999999999999999999998 57887664
No 23
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=5.3e-45 Score=330.75 Aligned_cols=288 Identities=18% Similarity=0.246 Sum_probs=236.6
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.+|++|+++|++++|++.... + ......+||++.|+|.+|++ ++.|.++
T Consensus 21 ~~m~~i~viG~~~iD~~~~~~----------------------~--------~~~~~~~GG~~~NvA~~la~-Lg~G~~~ 69 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPADL----------------------P--------GTYRLGFAGDTFNTAWYLAR-LRPESRI 69 (328)
T ss_dssp BSSCEEEEESCCEEEEEECSS----------------------T--------TEEEEEEECHHHHHHHHHHH-HCTTSEE
T ss_pred ccCCcEEEecCcEEEEecCCC----------------------C--------CceEEecCCHHHHHHHHHHh-cCCCCcE
Confidence 356799999999999997421 0 45678999999999999999 4225999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeecccccc---cCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLSAAN---CYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.+++|+|+++.+.++.. .++..++ ..+.+++
T Consensus 70 ~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (328)
T 4e69_A 70 SYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAARELAGDADA----LAAAMAR 145 (328)
T ss_dssp EEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHH----HHHHHTT
T ss_pred EEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHHhhcCcccc----chHHhcC
Confidence 999999999999999999999999999885 4566899998888889998876655322 1222111 2267889
Q ss_pred ceEEEEeccccc----cCHHHHHHHHHHHHhcCCeEEEeCC--cHHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 158 AKYYYIAGFFLT----VSPESIQMVAEHAAAKNKVFMMNLS--APFIC--EFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
+|++|++++.+. .+.+.+.++++.+++.++++++|+. ...|. ....+.+.++++++|++++|++|++.|++
T Consensus 146 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g- 224 (328)
T 4e69_A 146 ADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG- 224 (328)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT-
T ss_pred CCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC-
Confidence 999999987542 2346788999999999999999994 33331 22345678899999999999999999987
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
.++++++++.+ ...+++.||||+|++|++++++++.+++|+++ .++++|||||||+|+|+|+++|++|
T Consensus 225 ----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGDaf~a~~~~~l~~g 292 (328)
T 4e69_A 225 ----DAGPDATADRY------ARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPP--VAQVVDTTAAGDSFNAGLLDSVLAG 292 (328)
T ss_dssp ----CSSHHHHHHHH------HTTTCSEEEEBCTTSCEEEEETTEEEEECCCC--CCSCCCCTTHHHHHHHHHHHHHHTT
T ss_pred ----CCCHHHHHHHH------HhcCCCEEEEEeCCCCeEEEeCCceEEecCCC--CCCccCCCChhHHHHHHHHHHHHCC
Confidence 35788899998 56788999999999999999999888888764 2389999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhccccCCCC
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCTYPPK 337 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~~p~~ 337 (341)
+++++|+++|+++|+.+|++.|+..|..
T Consensus 293 ~~l~~a~~~A~~~aa~~v~~~Ga~~p~~ 320 (328)
T 4e69_A 293 QPLETAIAAAAALAGQVVQGKGALVEVP 320 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSSSSCCC-
T ss_pred CCHHHHHHHHHHHHHHHHccCCCcCChh
Confidence 9999999999999999999999987754
No 24
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=6.8e-46 Score=333.05 Aligned_cols=287 Identities=20% Similarity=0.257 Sum_probs=238.7
Q ss_pred CCC-cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC
Q 019402 1 MAY-EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG 79 (341)
Q Consensus 1 m~~-~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~ 79 (341)
|.+ |++|+++|++++|++..++ ++|.+++.....+....+||++.|+|.++++ | |.
T Consensus 1 ~~~~m~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~-L--G~ 57 (302)
T 2c4e_A 1 MGGKMEKITCVGHTALDYIFNVE--------------------KFPEPNTSIQIPSARKYYGGAAANTAVGIKK-L--GV 57 (302)
T ss_dssp -CCCEEEEEEESCCEEEEEEECS--------------------SCCCTTCCCCCSCEEEEEECHHHHHHHHHHH-T--TC
T ss_pred CCCCcCcEEEECceeEEEEeccc--------------------ccCCCCceeeecceeecCCCHHHHHHHHHHH-C--CC
Confidence 444 3489999999999999887 5777777777778899999999999999998 4 59
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhc
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+++++.+.+++..++++++.. .+
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~ 130 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FN 130 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-------CC
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-------cc
Confidence 99999999999999999999999999998874 56678999999886 68888877777777777766652 67
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
+|++|+++. .++.+..+++.+++.+ ++++|+....+ ....+.+.++++++|++++|++|++.+++.... +.
T Consensus 131 ~~~v~~~~~----~~~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~ 201 (302)
T 2c4e_A 131 TEIVHIATG----DPEFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIEHTNFLFMNKHEFERASNLLNF---EI 201 (302)
T ss_dssp EEEEEECSS----CHHHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTC---CH
T ss_pred CCEEEEeCC----CcHHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCc---cH
Confidence 999999863 3488899999999999 99999974221 112455778899999999999999999875422 11
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCc-ccCCCCcchhhHHHHHHHHhcCCCHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK-LVDTNGAGDAFVGGFLSQLVQEKPVEDCV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~ 316 (341)
. .+ ... ++.||||+|++|++++++++.+++|++++ + ++||+||||+|+|||+++|++|+++++|+
T Consensus 202 ~----~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~ 267 (302)
T 2c4e_A 202 D----DY------LER-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCG 267 (302)
T ss_dssp H----HH------HTT-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred H----HH------Hhc-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 1 45 344 78999999999999998888888887765 6 89999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 317 RTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 317 ~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
++|+++|+.++++.|+. +|+.+|+
T Consensus 268 ~~a~~~aa~~~~~~G~~~~~p~~~ev 293 (302)
T 2c4e_A 268 LIGAATASFVVEAKGCQTNLPTWDKV 293 (302)
T ss_dssp HHHHHHHHHHTTSSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHccccccccCCCHHHH
Confidence 99999999999999983 6766543
No 25
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.3e-45 Score=333.47 Aligned_cols=293 Identities=21% Similarity=0.238 Sum_probs=236.5
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
|++|+++|++++|++..++ +.|.+++..... ....+||++.|+|.+|++ + |.++.+
T Consensus 3 m~~i~viG~~~~D~~~~~~--------------------~~~~~~~~~~~~-~~~~~GG~~~NvA~~la~-L--G~~~~~ 58 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIE--------------------TETAPGASNPGS-WMEEAGGGGFNAARNLSR-L--GFEVRI 58 (317)
T ss_dssp CCEEEEESCCEEEEEEEES--------------------SSCCTTSCCCEE-EEEEEECHHHHHHHHHHH-T--TCEEEE
T ss_pred CCeEEEECchheEEeeccC--------------------CCCCCCCCceEe-EEEeCCcHHHHHHHHHHh-c--CCCcEE
Confidence 4589999999999999876 345555444433 678999999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecc-cccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANL-SAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||++++++..+.+|+.++++++ +|++++..+. +.+..++++.+......+.+..++++
T Consensus 59 i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 138 (317)
T 2nwh_A 59 IAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFL 138 (317)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEE
Confidence 999999999999999999999999996566778999999887 6888765443 44456776655531111567889999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
++++ ..+.+.+..+++.+++.+.++++|+..... .+.+.++++++|++++|++|++.|++. +.++.++++
T Consensus 139 ~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~----~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~ 208 (317)
T 2nwh_A 139 LCDA---NLPEDTLTALGLIARACEKPLAAIAISPAK----AVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWP 208 (317)
T ss_dssp EEET---TSCHHHHHHHHHHHHHTTCCEEEECCSHHH----HGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHH
T ss_pred EEeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHHH----HHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHH
Confidence 9975 456789999999999999999999975431 234567889999999999999999864 224455677
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC-eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDG-KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+.+ ...|++.||||+|++|+++++++ ..+++|++++ +++|||||||+|+|+|+++|++|+++++|+++|+
T Consensus 209 ~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~ 279 (317)
T 2nwh_A 209 NIL------RKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVTGAGDAMASGYLAAIAEGKTIREALRQGA 279 (317)
T ss_dssp HHH------HHTTCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHH------HHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 777 45578899999999999998766 4677777654 8999999999999999999999999999999999
Q ss_pred HHHhhhhhhcccc--CCCCCC
Q 019402 321 YAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 321 ~~aa~~v~~~g~~--~p~~~e 339 (341)
++|+.++++.|+. +|+.+|
T Consensus 280 ~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 280 AAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp HHHHHHHSSTTCCGGGCCHHH
T ss_pred HHHHHHHcCCCCCCCCCCHHH
Confidence 9999999999995 456544
No 26
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2e-45 Score=331.20 Aligned_cols=287 Identities=24% Similarity=0.341 Sum_probs=242.9
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc-e
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA-T 81 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~-v 81 (341)
|-++|+|+|++++|++..++ ++|.+++.....+....+||++.|+|.++++ +| .+ +
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~ 69 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVD--------------------HFTKPGETQKAIEMNVFPGGKGANQAVTVAK-IG--EKGC 69 (311)
T ss_dssp CCCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECSEEEEEEECHHHHHHHHHHH-HH--SSCE
T ss_pred ccCCEEEECcceeeEEEecc--------------------cCCCCCceEecCeeeecCCCHHHHHHHHHHH-cC--CCce
Confidence 44689999999999999988 6788888888888899999999999999998 45 89 9
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.|| ++. .++.+|+.+++.++ +|+++++.+.+++..++++++. .+.+++++
T Consensus 70 ~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~ 142 (311)
T 1vm7_A 70 RFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESD 142 (311)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC----HHHHTTCS
T ss_pred EEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC----hhhcccCC
Confidence 999999999999999999999999 554 46678999999887 5889888777877788887775 35678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+ +++.+.++++|+... .+...++++++|++++|++|++.|++....+.+++++
T Consensus 143 ~v~~~~---~~~~~~~~~~---a~~~~~~v~~Dp~~~------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 210 (311)
T 1vm7_A 143 ILLLQN---EIPFETTLEC---AKRFNGIVIFDPAPA------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 210 (311)
T ss_dssp EEEECS---SSCHHHHHHH---HHHCCSEEEECCCSC------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred EEEEeC---CCCHHHHHHH---HHHcCCEEEEeCcch------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHH
Confidence 999976 3344444433 778899999999752 1234568899999999999999998764444567888
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
+++.+ ...|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|+++|
T Consensus 211 ~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 281 (311)
T 1vm7_A 211 AAEKF------LELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFG 281 (311)
T ss_dssp HHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHH------HHcCCCEEEEEECCCCeEEEeCCceEEecCCCc---ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 88888 456889999999999999998888888887654 789999999999999999999999999999999
Q ss_pred HHHHhhhhhhcccc--CCCCCCC
Q 019402 320 CYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 320 ~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+++|+.++++.|+. +|+.+|+
T Consensus 282 ~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 282 TAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp HHHHHHHTTSSSSGGGCCCHHHH
T ss_pred HHHHHHHhCcCCccccCCCHHHH
Confidence 99999999999984 7776553
No 27
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=3.5e-45 Score=329.51 Aligned_cols=290 Identities=19% Similarity=0.197 Sum_probs=239.7
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.+++++|+++.++ ++ .+++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 4 i~~v~~n~~~D~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~ 59 (309)
T 3umo_A 4 IYTLTLAPSLDSATITP--------------------QI-YPEGKLRCTAPVFEPGGGGINVARAIAH-L--GGSATAIF 59 (309)
T ss_dssp EEEECSSCEEEEEEEES--------------------CC-CSSSEEECCCCEEEEESHHHHHHHHHHH-T--TCCEEEEE
T ss_pred EEEEecchhheEEEEcC--------------------cc-cCCCeEEeceeeecCCchHHHHHHHHHH-c--CCCeEEEE
Confidence 56666889999999998 45 5678888899999999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe--CCeeceeecccccccCCcccCCC-chhHhhhhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKR-PEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~ 162 (341)
.+|+| +|+.+++.|+++||+++++...+ +|+.++.+++ +|+++++...++ .+++++++. .+..+.+..+++++
T Consensus 60 ~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~ 135 (309)
T 3umo_A 60 PAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILV 135 (309)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEE
T ss_pred EecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEE
Confidence 99999 99999999999999999986543 5666665554 577777666554 355555422 01112235788999
Q ss_pred Eeccc-cccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCC--CcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 163 IAGFF-LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPY--MDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 163 i~~~~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~--~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++. ...+.+.+.++++.+++.++++++|+... .+.+++++ +|++++|++|++.+++....+.++.++
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~--------~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 207 (309)
T 3umo_A 136 ISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRK 207 (309)
T ss_dssp EESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHH--------HHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHH
T ss_pred EEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcH--------HHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHH
Confidence 99864 34567899999999999999999999643 26677877 499999999999999866555567888
Q ss_pred HHHHHhcCCCCCCCCc-cEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 240 IALKISQWPKASGTHK-RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
+++.+ .+.+. +.++||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|+++
T Consensus 208 ~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~ 278 (309)
T 3umo_A 208 AAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRF 278 (309)
T ss_dssp HHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHH------HHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 88888 44555 7899999999999998888888887655 89999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccccCCCCCCC
Q 019402 319 GCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
|+++|+.+|++.|+.+|+.+|+
T Consensus 279 A~~~aa~~v~~~G~~~~~~~ev 300 (309)
T 3umo_A 279 GVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHTTSSTTCCCCHHHH
T ss_pred HHHHHHHHhcCCCCCCCCHHHH
Confidence 9999999999999998887664
No 28
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=6.7e-44 Score=324.32 Aligned_cols=297 Identities=20% Similarity=0.245 Sum_probs=236.8
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.++++|+++|++++|++...+ ..|. ....+....+||++.|+|.++++ | |.++
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~--------------------~~~~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 61 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEY--------------------NRPM----EETMTFSKYVGGSPANIVIGSSK-L--GLKA 61 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSC--------------------SSCG----GGCCCEEEEEESHHHHHHHHHHH-T--TCCE
T ss_pred ccCCcEEEECcceEEEecCCC--------------------CCCc----cccceeEecCCCHHHHHHHHHHH-c--CCce
Confidence 345689999999999998654 2332 23467788999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cC-CCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhh
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DE-SAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~-~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (341)
.++|.+|+|.+|+++++.|++.||+++++. .+ ..+|+.+++.++ +|+++++.+. +++..++++++.. ..++
T Consensus 62 ~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~ 137 (332)
T 2qcv_A 62 GFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE----AYIR 137 (332)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH----HHHT
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH----HHHc
Confidence 999999999999999999999999999985 33 357888888765 6777665443 3455677776653 4578
Q ss_pred cceEEEEeccccc--cCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
++|++|++++.+. .+.+.+..+++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|++.|++..
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 217 (332)
T 2qcv_A 138 RSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRT 217 (332)
T ss_dssp TEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCS
T ss_pred cCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCC
Confidence 9999999987642 234788899999999999999999642 221 1123456778899999999999999998743
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
. .++..++++.+ ...|++.||||+|++|++++++ ++.+++|++++ +++||+||||+|+|||+++|++|
T Consensus 218 ~--~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~g 286 (332)
T 2qcv_A 218 E--KGDNDETIRYL------FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALISG 286 (332)
T ss_dssp S--CCCHHHHHHHH------TTSSCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHTT
T ss_pred c--CCCHHHHHHHH------HHcCCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHcC
Confidence 2 24667888888 6678999999999999999887 66788887755 88999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+++++|+++|+++|+.++++.|+. +|+.+|+
T Consensus 287 ~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 319 (332)
T 2qcv_A 287 KGIETALKYGSASASIVVSKHSSSDAMPSVEEI 319 (332)
T ss_dssp CCHHHHHHHHHHHHHHHHHC-----CCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHccCCCccCCCCHHHH
Confidence 999999999999999999999984 6776553
No 29
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=1e-44 Score=327.98 Aligned_cols=289 Identities=17% Similarity=0.198 Sum_probs=236.9
Q ss_pred CCCcceEEEecCceeee-EeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC
Q 019402 1 MAYEGILLGMGNPLLDI-SAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG 79 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~ 79 (341)
|+| .+++.+++++|+ ++.++ ++ .+++..+.......+||++.|+|.+|++ +| .
T Consensus 1 ~~m--i~tvt~np~iD~~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~ 54 (320)
T 3ie7_A 1 MSL--IYTITLNPAIDRLLFIRG--------------------EL-EKRKTNRVIKTEFDCGGKGLHVSGVLSK-FG--I 54 (320)
T ss_dssp -CC--EEEEESSCEEEEEEEESS--------------------SC-CTTSCCCCSEEEEEEESHHHHHHHHHHH-HT--C
T ss_pred Cce--EEEEecchHHeeeEEEcC--------------------Cc-cCCCeeEeceeeecCCchHHHHHHHHHH-cC--C
Confidence 666 789999999999 99998 45 6777888888999999999999999998 45 9
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEeCCe--eceeecccccccCCcccCCC--chhHhh
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKR--PEIWSI 154 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~ 154 (341)
++.++|.+|+| +|+.+++.|++.||+++++ +..+ +|+.+++++++|+ |+++...+ ..++++++.. ....+.
T Consensus 55 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~ 130 (320)
T 3ie7_A 55 KNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLSDDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKK 130 (320)
T ss_dssp CEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEETTCSCCEEEECCC--CCCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEECCCceeEEEeCCC--CCCCHHHHHHHHHHHHHH
Confidence 99999999998 9999999999999999999 5554 8999998888888 77655444 2455554432 112256
Q ss_pred hhcceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCC
Q 019402 155 VEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 155 ~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~ 232 (341)
+.++|+++++++.. ..+.+.+..+++.+++.++++++|+.... +.+.+. ++|++++|++|++.+++..
T Consensus 131 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~dil~~N~~E~~~l~g~~-- 200 (320)
T 3ie7_A 131 VKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY--------LNLAVEMGVDFIKPNEDEVIAILDEK-- 200 (320)
T ss_dssp CCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHH--------HHHHHHHCCSEECCBTTGGGGGSCTT--
T ss_pred hcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH--------HHHHHhcCCeEEeeCHHHHHHHhCCC--
Confidence 78999999988653 44568899999999999999999997432 444444 8999999999999987642
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
.....+.+.++ ... ++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++
T Consensus 201 -~~~~~~~~~~~------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~ 269 (320)
T 3ie7_A 201 -TNSLEENIRTL------AEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPI 269 (320)
T ss_dssp -CCCHHHHHHHH------TTT-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred -cCCCHHHHHHH------Hhh-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCH
Confidence 12123334444 223 78999999999999999999999988765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCCC
Q 019402 313 EDCVRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 313 ~~a~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
++|+++|+++|+.+|++.|+.+|+.+|+
T Consensus 270 ~~a~~~A~a~aa~~v~~~G~~~~~~~ev 297 (320)
T 3ie7_A 270 TETLKVATGCSASKVMQQDSSSFDLEAA 297 (320)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCCHHHH
Confidence 9999999999999999999988887654
No 30
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.8e-44 Score=327.64 Aligned_cols=291 Identities=16% Similarity=0.183 Sum_probs=233.4
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
+.++++|++++|++..++ ++ .+++.....+....+||++.|+|.++++ || .++.++
T Consensus 21 Mi~~v~G~~~~D~~~~~~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i 76 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLT--------------------AL-KLDDVNRVQEVSKTAGGKGLNVTRVLAQ-VG--EPVLAS 76 (330)
T ss_dssp CEEEEESSCEEEEEEEES--------------------CC-CTTSEEEESCCEEEEECHHHHHHHHHHH-HT--CCEEEE
T ss_pred EEEEEecchhheEEEecC--------------------Cc-cCCceEEeceEEEcCCchHHHHHHHHHH-hC--CCeEEE
Confidence 477899999999999987 33 4555666678889999999999999998 45 999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCc--hhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRP--EIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~ 162 (341)
|.+|+ .+|+.+++.|++.||+++++...+ +|+.++.++++++++.+...++ .+++++++.. ...+.++++|++|
T Consensus 77 ~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~ 152 (330)
T 2jg1_A 77 GFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVA 152 (330)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEE
T ss_pred EEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 99996 699999999999999999986443 4788877777555554433332 3555444321 1113468899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC---CCcEEEcCHHHHHHHHhhcCC-CCCCH
Q 019402 163 IAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP---YMDYVFGNETEARTFAKVHGW-ETDNV 237 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~---~~dil~~n~~E~~~l~~~~~~-~~~~~ 237 (341)
++++.. ..+.+.+.++++.++++++++++|+.... +.++++ ++|++++|++|++.+++.... +.++.
T Consensus 153 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 224 (330)
T 2jg1_A 153 ISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGAT--------LQTVLENPYKPTVIKPNISELYQLLNQPLDESLESL 224 (330)
T ss_dssp EESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHHH--------HHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHH--------HHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHH
Confidence 988654 34567899999999999999999997432 445555 899999999999999864321 12345
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
+++++.+ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 225 ~~~~~~l------~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~ 295 (330)
T 2jg1_A 225 KQAVSQP------LFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTI---SVLNPVGSGDSTVAGITSAILNHENDHDLLK 295 (330)
T ss_dssp HHHHHSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEeCCCc---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 5666666 556889999999999999998888888887755 8999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCCCCCCC
Q 019402 318 TGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+|+++|+.++++.|+.+|+.+|+
T Consensus 296 ~A~a~aa~~v~~~G~~~~~~~ev 318 (330)
T 2jg1_A 296 KANTLGMLNAQEAQTGYVNLNNY 318 (330)
T ss_dssp HHHHHHHHHHTSSSSSCCCGGGH
T ss_pred HHHHHHHHHhcCcCCCCCCHHHH
Confidence 99999999999999988887764
No 31
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=1.3e-44 Score=327.77 Aligned_cols=296 Identities=17% Similarity=0.173 Sum_probs=234.3
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|.| .|+++|++++|++..++ + |.+++.....+....+||++.|+|.++++ || .+
T Consensus 1 m~m--~i~v~g~~~~D~~~~v~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~ 54 (323)
T 2f02_A 1 MSL--IVTVTMNPSIDISYLLD--------------------H-LKLDTVNRTSQVTKTPGGKGLNVTRVIHD-LG--GD 54 (323)
T ss_dssp -CC--EEEEESSCEEEEEEECS--------------------C-CCTTSEEEESCEEEEEESHHHHHHHHHHH-HT--CC
T ss_pred Cce--EEEEecCceeEEEEecC--------------------C-cccCCEEEeceEEEcCCcHHHHHHHHHHH-cC--CC
Confidence 544 89999999999999987 3 56677777788899999999999999998 45 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCc--hhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRP--EIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 158 (341)
+.++|.+|+ .+|+++++.|++.||+++++...+ +|+.++.++++++++.+...++ .+++++++.. ...+.+.++
T Consensus 55 ~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~ 130 (323)
T 2f02_A 55 VIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGP--TVSPEEISNFLENFDQLIKQA 130 (323)
T ss_dssp EEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCC--CCCHHHHHHHHHHHHHhccCC
Confidence 999999997 599999999999999999986543 4777777776455544433332 4555544320 112346889
Q ss_pred eEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC-CC-C
Q 019402 159 KYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW-ET-D 235 (341)
Q Consensus 159 ~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-~~-~ 235 (341)
|+++++++.+ ..+.+.+..+++.+++.+.++++|+.+.. ..+.+..+ +++|++++|++|++.|++.... +. +
T Consensus 131 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~~~~~ 205 (323)
T 2f02_A 131 EIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS----LRQVLQGP-WKPYLIKPNLEELEGLLGQDFSENPLA 205 (323)
T ss_dssp SEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHH----HHHHHHSS-CCCSEECCBHHHHHHHHTCCCCSSCHH
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH----HHHHHhcc-CCCeEEecCHHHHHHHhCCCCCCCcHH
Confidence 9999988653 24557899999999999999999997543 12222221 6899999999999999874322 12 2
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a 315 (341)
++.++++.+ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|
T Consensus 206 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a 276 (323)
T 2f02_A 206 AVQTALTKP------MFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAEL 276 (323)
T ss_dssp HHHHHHTSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEcCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHH
Confidence 455566666 556889999999999999998888888887655 88999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccccCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|+.++++.|+.+|+.+|+
T Consensus 277 ~~~A~~~aa~~v~~~G~~~~~~~ev 301 (323)
T 2f02_A 277 LKWGMAAGMANAQERMTGHVDVENV 301 (323)
T ss_dssp HHHHHHHHHHHHHSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCcCCCCHHHH
Confidence 9999999999999999988876553
No 32
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=8e-45 Score=327.75 Aligned_cols=284 Identities=20% Similarity=0.250 Sum_probs=231.5
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++...+ ++.....+....+||++.|+|.++++ | |.++.++|
T Consensus 3 ~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~i~ 54 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNP-------------------------GPLRFVNYFEKHVAGSELNFCIAVVR-N--HLSCSLIA 54 (313)
T ss_dssp CEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCCEEEEE
T ss_pred eEEEECcceEEEecCCC-------------------------CcccccceeEecCCChHHHHHHHHHH-C--CCcEEEEE
Confidence 89999999999996332 22345567788999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEE--Ee-CCeeceeec--ccccccCCcccCCCchhHhhhhcce
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVC--VV-GGERSLVAN--LSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~--~~-~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++. ++ +|++++..+ .+++..++++++.. ..++++|
T Consensus 55 ~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~ 130 (313)
T 2v78_A 55 RVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE----NYVRNSR 130 (313)
T ss_dssp EEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSS
T ss_pred EeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH----HHhcCCC
Confidence 99999999999999999999999985 456689999988 65 687876544 35566788777653 5678999
Q ss_pred EEEEeccccc---cCHHHHHHHHHHHHhcCCeEEEeCCc--HHHH--hhhhHHHHhhCCCCc--EEEcCHHHHHHHHhhc
Q 019402 160 YYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFREPQEKALPYMD--YVFGNETEARTFAKVH 230 (341)
Q Consensus 160 ~v~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~d--il~~n~~E~~~l~~~~ 230 (341)
++|++++.+. .+.+.+.++++.+++. ++|+.. ..|. ...++.+.++++++| ++++|++|++.+++
T Consensus 131 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-- 204 (313)
T 2v78_A 131 LVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-- 204 (313)
T ss_dssp EEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS--
T ss_pred EEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC--
Confidence 9999987642 2345666777766654 667743 2332 223455778899999 99999999999986
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.++++++++++ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 205 ---~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 272 (313)
T 2v78_A 205 ---VTDPDEAYRKY------KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGK 272 (313)
T ss_dssp ---CCCHHHHHHHH------HHTTEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ---CCCHHHHHHHH------HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 456789999999999999998888888887765 789999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhhhhcccc--CCCCCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e 339 (341)
++++|+++|+++|+.++++.|+. +|+.+|
T Consensus 273 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 303 (313)
T 2v78_A 273 DIEYSLAHGIAASTLVITVRGDNELTPTLED 303 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999995 576654
No 33
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.1e-44 Score=324.73 Aligned_cols=284 Identities=20% Similarity=0.236 Sum_probs=232.0
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++...+ ++.....+....+||++.|+|.++++ | |.++.++
T Consensus 2 ~~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~~ 53 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP-------------------------GPLRHVSYFEKHVAGSEANYCVAFIK-Q--GNECGII 53 (311)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred CCEEEECCceEEEecCCC-------------------------CcccccceeeecCCChHHHHHHHHHH-C--CCceEEE
Confidence 489999999999997332 12345567788999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCe--eceeec--ccccccCCcccCCCchhHhhhhcc
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGE--RSLVAN--LSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+ |+++.+ .++...++++++.. ..++++
T Consensus 54 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~ 129 (311)
T 2dcn_A 54 AKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSA 129 (311)
T ss_dssp CEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTC
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh----HHHcCC
Confidence 999999999999999999999999885 46678999998886 677 776544 35566787777653 567899
Q ss_pred eEEEEeccccc---cCHHHHHHHHHHHHhcCCeEEEeCCc--HHHH-hhhhHHHHhhCC--CCcEEEcCHHHHHHHHhhc
Q 019402 159 KYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSA--PFIC-EFFREPQEKALP--YMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 159 ~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~ 230 (341)
|++|++++.+. .+.+.+.++++.+++. ++|+.. ..|. ....+.+.++++ ++|++++|++|++.+++
T Consensus 130 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-- 203 (311)
T 2dcn_A 130 DLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-- 203 (311)
T ss_dssp SEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS--
T ss_pred CEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC--
Confidence 99999987642 2346677777776655 677753 2332 123345677888 99999999999999986
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.++++++++.+ ... ++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 204 ---~~~~~~~~~~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~ 270 (311)
T 2dcn_A 204 ---ESDPDKAAKAF------SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGF 270 (311)
T ss_dssp ---CCCHHHHHHHH------TTT-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTC
T ss_pred ---CCCHHHHHHHH------HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 566 88999999999999999888888887765 789999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhhhhcccc--CCCCCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e 339 (341)
++++|+++|+++|+.++++.|+. +|+.+|
T Consensus 271 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 271 EMEKALDYAIVASTLNVMIRGDQENLPTTKD 301 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999985 576654
No 34
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=3e-44 Score=323.41 Aligned_cols=288 Identities=18% Similarity=0.165 Sum_probs=227.2
Q ss_pred EE-EecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 7 LL-GMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 7 i~-~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
|+ +.|++++|++..++ + |.+++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 4 I~~v~g~~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~ 59 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITP--------------------Q-IYPEGKLRCTAPVFEPGGGGINVARAIAH-L--GGSATAIF 59 (309)
T ss_dssp EEEECSSCEEEEEEEES--------------------C-CCSSSEEECCCCEEEEESHHHHHHHHHHH-T--TCCEEEEE
T ss_pred EEEEeccchheEEEEcC--------------------C-CcCCCeeeccceeecCCchHHHHHHHHHH-c--CCCeEEEE
Confidence 55 66799999999987 3 45666777788899999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEE-Ee-CCeeceeecccccccCCcccCCCc--hhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVC-VV-GGERSLVANLSAANCYKSEHLKRP--EIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v 161 (341)
.+|+| +|+.+++.|++.||+++++...+ .|+.++.+ ++ +|+++.+..+++ .++++++... ...+.+++ |++
T Consensus 60 ~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v 134 (309)
T 3cqd_A 60 PAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AIL 134 (309)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEE
T ss_pred EecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEE
Confidence 99998 99999999999999999986543 36777666 65 577765554443 3444443220 01123567 999
Q ss_pred EEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHh-hCCCC-cEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 162 YIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEK-ALPYM-DYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 162 ~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~-dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
|++++.. ..+.+.+.++++.+++.+.++++|+.... +.+ +.+++ |++++|++|++.+++....+.+++.
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 3cqd_A 135 VISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVR 206 (309)
T ss_dssp EEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHH
Confidence 9998653 34568899999999999999999997532 333 33788 9999999999999876544455677
Q ss_pred HHHHHHhcCCCCCCCC-ccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 239 EIALKISQWPKASGTH-KRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
++++.+ ...| ++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|++
T Consensus 207 ~~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~ 277 (309)
T 3cqd_A 207 KAAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVR 277 (309)
T ss_dssp HHHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH------HHcCCCCEEEEEecCCceEEEECCceEEEeCCcc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 888888 4567 88999999999999998877888887654 8999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCCCCCCC
Q 019402 318 TGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+|+++|+.++++.|+..|+.+|+
T Consensus 278 ~A~~~aa~~~~~~G~~~~~~~~v 300 (309)
T 3cqd_A 278 FGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHHTC-----CCCHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCHHHH
Confidence 99999999999999988876653
No 35
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=7.2e-44 Score=320.92 Aligned_cols=281 Identities=22% Similarity=0.266 Sum_probs=228.3
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++...+ +......+....+||++.|+|.++++ +| .++.++|
T Consensus 3 ~i~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~ 54 (309)
T 1v1a_A 3 EVVTAGEPLVALVPQEP-------------------------GHLRGKRLLEVYVGGAEVNVAVALAR-LG--VKVGFVG 54 (309)
T ss_dssp SEEEESCCEEEEECSSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-HT--CCEEEEE
T ss_pred cEEEEccceEEEecCCC-------------------------CcccchheeeeecCcHHHHHHHHHHH-cC--CCeEEEE
Confidence 79999999999986332 12344567788999999999999998 45 9999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.+|+|.+|+.+++.|++.||+++++. ..+ +|+.+++..+ +|+++++.+. ++...++++++.. ..++++|++
T Consensus 55 ~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v 129 (309)
T 1v1a_A 55 RVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRFL 129 (309)
T ss_dssp EECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSEE
T ss_pred EeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh----hHhcCCCEE
Confidence 99999999999999999999999985 455 8999988876 6777765442 4556777776653 457899999
Q ss_pred EEeccccc---cCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH-hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 162 YIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSAP--FIC-EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 162 ~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+. .+.+.+.++++.+++.++++++|+... .|. ....+.+.++++++|++++|++|++.+++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----- 204 (309)
T 1v1a_A 130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV----- 204 (309)
T ss_dssp EEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----
T ss_pred EEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----
Confidence 99998653 234678889999999999999998642 221 1234557789999999999999999998621
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
+++++. .+++.||||+|++|+++ .+ ++.+++|++++ +++|||||||+|+|||+++|++|+++++
T Consensus 205 --~~~~~~---------~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~ 269 (309)
T 1v1a_A 205 --EEALRA---------LSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEE 269 (309)
T ss_dssp --HHHHHH---------TCCSEEEEECGGGCEEE-EETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred --HHHHHh---------cCCCEEEEEecCCCeeE-ecCCcEEEeCCCCC---CcCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 444431 36789999999999998 55 67788887655 7899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhcccc--CCCCCC
Q 019402 315 CVRTGCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~~--~p~~~e 339 (341)
|+++|+++|+.++++.|+. +|+.+|
T Consensus 270 a~~~a~~~aa~~v~~~G~~~~~~~~~~ 296 (309)
T 1v1a_A 270 RLRLANLLGASVAASRGDHEGAPYRED 296 (309)
T ss_dssp HHHHHHHHHHHHHTSSTTTTTCCCHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcCCCCHHH
Confidence 9999999999999999985 576654
No 36
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=1.8e-44 Score=328.77 Aligned_cols=285 Identities=19% Similarity=0.292 Sum_probs=224.1
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|.+|.+|+++|++++|++... .......+||++.|+|.++++ | |.+
T Consensus 21 ~~~m~~ilviG~~~~D~~~~~-------------------------------~~~~~~~~GG~~~NvA~~la~-L--G~~ 66 (339)
T 1tyy_A 21 MKAMNKVWVIGDASVDLVPEK-------------------------------QNSYLKCPGGASANVGVCVAR-L--GGE 66 (339)
T ss_dssp ----CCEEEESCCEEEEEECS-------------------------------SSEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred ccccCCEEEECcceeEEeccC-------------------------------CCceEEcCCCHHHHHHHHHHH-c--CCC
Confidence 334568999999999999742 134567999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (341)
+.++|.+|+|.+|+++++.|++.||+++++. ..+.+|+.+++.++ +|+|++..+. +++..++++.. +.+.
T Consensus 67 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~------~~l~ 140 (339)
T 1tyy_A 67 CGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL------PPFR 140 (339)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC------CCCC
T ss_pred eEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchh------hHhc
Confidence 9999999999999999999999999999985 46678999988776 6888765443 44445554422 3467
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
++|++|++++.+ ..+.+.+.++++.+++.++++++|+... .|. ....+.+.++++++|++++|++|++.|++.
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~- 219 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA- 219 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-
Confidence 899999998653 2344788899999999999999998632 221 123455777889999999999999999873
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC-
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g- 309 (341)
++++++++.+ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 220 ----~~~~~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 286 (339)
T 1tyy_A 220 ----SHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRAN 286 (339)
T ss_dssp ----SSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSS
T ss_pred ----CCHHHHHHHH------HHcCCCEEEEEECCCceEEEeCCceEEcCCCCC---CcCCCCCchHHHHHHHHHHHHhcc
Confidence 3455566655 456788999999999999998888888887755 79999999999999999999997
Q ss_pred ----CCHHHHHHHHHHHHhhhhhhccc--cCCCCCC
Q 019402 310 ----KPVEDCVRTGCYAANVVIQRSGC--TYPPKPE 339 (341)
Q Consensus 310 ----~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e 339 (341)
+++++|+++|+++|+.++++.|+ .+|+.+|
T Consensus 287 ~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 287 CWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp SCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHH
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 89999999999999999999998 4576554
No 37
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=3.4e-44 Score=328.03 Aligned_cols=294 Identities=17% Similarity=0.182 Sum_probs=230.0
Q ss_pred cceEEEecCceeeeEee--cCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 4 EGILLGMGNPLLDISAV--VDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+++|+|+|++++|++.. ++. ++ ...|.+ ..........+||+ .|+|.++++ + |.++
T Consensus 53 ~~~ilvvG~~~~D~~~~g~v~r--------------~~--p~~p~~--~~~~~~~~~~~GG~-~NvA~~la~-L--G~~v 110 (352)
T 4e84_A 53 RSRVLVVGDVMLDRYWFGNVDR--------------IS--PEAPVP--VVHVQRQEERLGGA-ANVARNAVT-L--GGQA 110 (352)
T ss_dssp TCEEEEEECEEEEEEEEEEEEE--------------EC--SSSSSE--EEEEEEEEEEEEEH-HHHHHHHHH-T--TCEE
T ss_pred CCcEEEECccceEEEEeecccc--------------cC--CCCCcc--eEEeeEEEEecChH-HHHHHHHHH-c--CCCE
Confidence 56899999999999986 320 00 022333 35567788999997 899999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeec-eeecc-cccccCCcccCCCchhHhhhhcce
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERS-LVANL-SAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.||++..++..+.+|+.+++.++++++. .+... +++.....+.+ ....+.+.++|
T Consensus 111 ~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~ 188 (352)
T 4e84_A 111 GLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGL--ARFDVLLPQHD 188 (352)
T ss_dssp EEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHH--HHHHHHGGGCS
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHH--HHHHHhcccCC
Confidence 9999999999999999999999999966666777899998888754443 33221 22111111111 11235688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
+++++++.. .+.+.+.++++.+++.|+++++|++... .++++++|++++|++|++.+++ ...+.++..+
T Consensus 189 ~v~~~g~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~ 257 (352)
T 4e84_A 189 VVLMSDYAK-GGLTHVTTMIEKARAAGKAVLVDPKGDD---------WARYRGASLITPNRAELREVVG-QWKSEDDLRA 257 (352)
T ss_dssp EEEEECCSS-SSCSSHHHHHHHHHHTTCEEEEECCSSC---------CSTTTTCSEECCBHHHHHHHHC-CCSSHHHHHH
T ss_pred EEEEeCCCC-CCHHHHHHHHHHHHhcCCEEEEECCCcc---------hhhccCCcEEcCCHHHHHHHhC-CCCCHHHHHH
Confidence 999997642 2334588899999999999999997532 2478899999999999999987 2223345566
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
+++.+.+ ..|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|
T Consensus 258 ~a~~l~~-----~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A 329 (352)
T 4e84_A 258 RVANLRA-----ELDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLA 329 (352)
T ss_dssp HHHHHHH-----HHTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHH-----HhCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 7777721 24788999999999999999999999998755 899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCCCCCC
Q 019402 320 CYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|++.|+..|+.+|+
T Consensus 330 ~aaaa~~v~~~Ga~~~t~~el 350 (352)
T 4e84_A 330 NRAAGIVVGKLGTATVDYDEL 350 (352)
T ss_dssp HHHHHHHHTSSSSCCCCHHHH
T ss_pred HHHHHHHhcCCCCccCCHHHh
Confidence 999999999999988877664
No 38
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=6.4e-44 Score=326.90 Aligned_cols=297 Identities=15% Similarity=0.145 Sum_probs=216.4
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+||++|+++|++++|+...-+ .......+....+||.+.|+|.+|++ ||.++
T Consensus 22 ~mm~kv~~~GE~m~~l~p~~~-------------------------~~~~~~~~~~~~~GG~~aNvA~~lar---LG~~~ 73 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQQG-------------------------IPFSQTTALDIHIGGAEANVAVNLSK---LGHPT 73 (351)
T ss_dssp ---CEEEEECCCEEEEECCTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH---TTCCE
T ss_pred hccCCEEEEcceeEEecCCCC-------------------------CCccccCeEEEecCChHHHHHHHHHH---cCCCe
Confidence 477899999999999876432 12344567789999999999999998 45999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEE-eCCeeceeecccccc---cCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCV-VGGERSLVANLSAAN---CYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~-~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+++++.|+++||+++++...+..++.+++.. +++....+.+...+. .+...++. ..+.+++
T Consensus 74 ~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~ 150 (351)
T 4gm6_A 74 RIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKG 150 (351)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTT
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhh
Confidence 9999999999999999999999999999865555555554444 343333333322221 22222222 3467889
Q ss_pred ceEEEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCC--cHHHHh-hhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 158 AKYYYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLS--APFICE-FFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 158 ~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~--~~~~~~-~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
++++|++++.+..+ .+.+.++++.++++|+++++|+. +..|.. ..++.+.++++++|++++|++|+..+++...
T Consensus 151 ~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 230 (351)
T 4gm6_A 151 IRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISS 230 (351)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCT
T ss_pred cccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCC
Confidence 99999998765443 37888999999999999999884 334432 2456788899999999999999999987543
Q ss_pred CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC--CCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 232 WETDNVEEIALKISQWPKASGTHKRITVITQGA--DPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
...+..+...+.+.... ...+.+.++++.+. .|+.++..++.++++++++. +++|||||||+|+|||+++|++|
T Consensus 231 ~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~VvDttGAGDaF~ag~l~~l~~g 306 (351)
T 4gm6_A 231 ETTDYYQAMHDKYPNIE--LFYATKRTVISASHHLLQGHLWTQGECWESEEYAIY--PIVDRVGGGDAYTAAVLHGILSE 306 (351)
T ss_dssp TCSCHHHHHHHHCTTCC--EEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC--SCSCCTTHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHhhhhhhh--hhhccccceeeeccCCceEEEEeCCceEEeCCCCCC--CcCCCCChhHHHHHHHHHHHHCC
Confidence 32222233333321110 11223345555444 46677778888888776543 78999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhcccc
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCT 333 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~ 333 (341)
+++++|+++|+++|+++|++.|+.
T Consensus 307 ~~~~~al~~A~aaaal~v~~~Ga~ 330 (351)
T 4gm6_A 307 WRPDETVKFATAAAGLKHSIHGDI 330 (351)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999984
No 39
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=5.5e-43 Score=315.45 Aligned_cols=280 Identities=19% Similarity=0.250 Sum_probs=229.5
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++..++ ++|..++.....+....+||++.|+|.++++ +| .++.+
T Consensus 17 ~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~v~~ 73 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVD--------------------KYPKEDSEIRCLSQRWQRGGNASNSCTILSL-LG--APCAF 73 (312)
T ss_dssp CCEEEEESCCEEEEEEEES--------------------SCCCTTCEEECSEEEEEEESHHHHHHHHHHH-HT--CCEEE
T ss_pred CCcEEEECcceEEEeeccc--------------------cCCCccceeecccceeccCccHHHHHHHHHH-cC--CceEE
Confidence 5689999999999999887 4666666666667788999999999999998 45 99999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeec-CCCCcceEEEEEe--CCeeceeecccccccCCcccCCCchhHhhhhcceE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
+|.+|+|.+|+.+++.|+++||+++++.. ++.+|+.++++++ +|+|+++.+.++...+++++++. ..+.++|+
T Consensus 74 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 149 (312)
T 2hlz_A 74 MGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKW 149 (312)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEEE
T ss_pred EEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCCE
Confidence 99999999999999999999999998854 3567888877775 58888877776666777766543 24678999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhc--------CCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 161 YYIAGFFLTVSPESIQMVAEHAAAK--------NKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+|++++ .++....+++.+++. +.++++|+... ++.+.++++++|++++|++|++.+ +
T Consensus 150 v~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~~~dil~~n~~ea~~l-g---- 214 (312)
T 2hlz_A 150 IHIEGR----NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------REELFQLFGYGDVVFVSKDVAKHL-G---- 214 (312)
T ss_dssp EEEECS----SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------CGGGGGGGGSSSEEEECHHHHHHT-T----
T ss_pred EEEecc----CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------hHHHHHHHhcCCEEEEcHHHHHHc-C----
Confidence 999975 356677788888776 67899998643 234678899999999999999886 3
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~ 311 (341)
.++.+++++.+.++ ...| +.||||+|++|+++++. +..+++|+++ .++++|||||||+|+|+|+++|++|++
T Consensus 215 -~~~~~~~~~~l~~~---~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vvdt~GAGDaf~a~~~~~l~~g~~ 287 (312)
T 2hlz_A 215 -FQSAEEALRGLYGR---VRKG-AVLVCAWAEEGADALGPDGKLLHSDAFP--PPRVVDTLGAGDTFNASVIFSLSQGRS 287 (312)
T ss_dssp -CCSHHHHHHHHGGG---SCTT-CEEEEECGGGCEEEECTTCCEEEECCCC--CSSCCCCTTHHHHHHHHHHHHHHTTCC
T ss_pred -CCCHHHHHHHHHHh---cCCC-CEEEEEecccCeEEEccCCCEEECCCCC--CCCcccCCCchHHHHHHHHHHHHcCCC
Confidence 34678888887543 1223 78999999999999874 5577888643 237899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccc
Q 019402 312 VEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 312 ~~~a~~~A~~~aa~~v~~~g~ 332 (341)
+++|+++|+++|+.+|++.|+
T Consensus 288 ~~~a~~~a~~~aa~~v~~~G~ 308 (312)
T 2hlz_A 288 VQEALRFGCQVAGKKCGLQGF 308 (312)
T ss_dssp HHHHHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHHHHHHhhcCc
Confidence 999999999999999999997
No 40
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=1.9e-43 Score=318.64 Aligned_cols=281 Identities=22% Similarity=0.271 Sum_probs=231.2
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++...+ ++.....+....+||++.|+|.+|++ | |.++.++
T Consensus 2 ~~v~viG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i 53 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-------------------------GDLKDVRLFEKHPGGAPANVAVGVSR-L--GVKSSLI 53 (313)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCTTTCCEEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred CcEEEECceeeeeecCCC-------------------------CCcccccceeecCCCHHHHHHHHHHH-C--CCCeEEE
Confidence 479999999999997543 23345667789999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeeccc-ccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLS-AANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.+++|+++++.+.+ +...++++++.. +.+++++++|
T Consensus 54 g~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~~~ 129 (313)
T 3ewm_A 54 SKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW----DIVEEAKIVN 129 (313)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH----HHHHHCSEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH----HHhCCCCEEE
Confidence 999999999999999999999999885 5677899998887778888877655 445777777763 5688999999
Q ss_pred Eecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH---hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 163 IAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC---EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 163 i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
++++.+ +.+.+.+.++++.++ .++++++|+... .|. ....+.+.++++++|++++|++|++.+.+...
T Consensus 130 ~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~---- 204 (313)
T 3ewm_A 130 FGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGV---- 204 (313)
T ss_dssp EESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTC----
T ss_pred EcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCc----
Confidence 999754 344578889999988 478899999642 222 12345677888999999999999998875210
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHh--cCCCHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV--QEKPVE 313 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~--~g~~~~ 313 (341)
...+...||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|+ +|++++
T Consensus 205 ---------------~~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~ 266 (313)
T 3ewm_A 205 ---------------EVKGSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGLDLL 266 (313)
T ss_dssp ---------------CCCCSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHH
T ss_pred ---------------cccCceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHH
Confidence 112345689999999999999998889988765 899999999999999999999 999999
Q ss_pred HHHHHHHHHHhhhhhhccc-cCCCCCCC
Q 019402 314 DCVRTGCYAANVVIQRSGC-TYPPKPEF 340 (341)
Q Consensus 314 ~a~~~A~~~aa~~v~~~g~-~~p~~~e~ 340 (341)
+|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 267 ~a~~~A~~~aa~~v~~~G~~~~p~~~ev 294 (313)
T 3ewm_A 267 KLGKFANLVAALSTQKRGAWSTPRKDEL 294 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 9999999999999999998 56776654
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.6e-44 Score=328.22 Aligned_cols=293 Identities=15% Similarity=0.132 Sum_probs=232.3
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhcc---CCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASK---ENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+.|+|+|++++|++..++ + |.+++.... .+....+||++.|+|.++++ | |.++
T Consensus 13 ~~~~v~G~~~vD~~~~~~--------------------~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 68 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIE--------------------D-FQVNRLYRINDLSKTQMSPGGKGINVSIALSK-L--GVPS 68 (331)
T ss_dssp CEEEEESSCEEEEEEECT--------------------T-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHH-T--TCCE
T ss_pred eEEEEecchHHeEEEEcC--------------------C-ccCCceEEeccccceEEecCcHHHHHHHHHHH-c--CCCe
Confidence 489999999999999997 3 556666666 78889999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcC--CceeEeecCCCCcceEEEEEe-CCee-ceeecccccccCCcccCCCc--hhHhhh
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAG--VNVKYYEDESAPTGTCAVCVV-GGER-SLVANLSAANCYKSEHLKRP--EIWSIV 155 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~g--i~~~~~~~~~~~t~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~ 155 (341)
.++|.+|+| +|+++++.|++.| |+++++...+ +|+.++++++ +|++ +.+...++ .++++++... ...+.+
T Consensus 69 ~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 144 (331)
T 2ajr_A 69 VATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTL 144 (331)
T ss_dssp EEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhc
Confidence 999999998 9999999999999 9999986544 4788877777 5777 44444443 3555444320 012356
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHH-HHHHHhhcCCC
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETE-ARTFAKVHGWE 233 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E-~~~l~~~~~~~ 233 (341)
.++|++|+++..+ ..+.+.+..+++.+++.++++++|+.... ..+.+... +++|++++|++| ++.+++....+
T Consensus 145 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~l~~~-~~~dil~~N~~E~~~~l~g~~~~~ 219 (331)
T 2ajr_A 145 SKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRL----LERIYEGP-EFPNVVKPDLRGNHASFLGVDLKT 219 (331)
T ss_dssp TTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHH----HHHHHHSS-CCCSEECCCCTTCCSCBTTBCCCS
T ss_pred ccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHH----HHHHHhcC-CCCeEEEeCccchHHHHhCCCCCC
Confidence 7899999987643 34457899999999999999999997532 12222221 459999999999 99887643322
Q ss_pred CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEe-cccCCCCcccCCCCcchhhHHHHHHHHh-cCCC
Q 019402 234 TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFP-VILLPKEKLVDTNGAGDAFVGGFLSQLV-QEKP 311 (341)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~-~~~~~~~~vvdttGAGDaf~a~~~~~l~-~g~~ 311 (341)
.++++++++.+ ... ++.||||+|++|++++++++.+++| ++++ +++|||||||+|+|||+++|+ +|++
T Consensus 220 ~~~~~~~~~~l------~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~l~~l~~~g~~ 289 (331)
T 2ajr_A 220 FDDYVKLAEKL------AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKHGAN 289 (331)
T ss_dssp HHHHHHHHHHH------HHH-SSEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHH------HHh-cCEEEEeecCCceEEEeCCcEEEEecCCcc---cccCCCchHHHHHHHHHHHHHHcCCC
Confidence 23455677777 344 7889999999999999888788888 7654 899999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCCCC
Q 019402 312 VEDCVRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 312 ~~~a~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|+++|+.++++.|+.+|+.+|+
T Consensus 290 ~~~al~~A~a~aa~~v~~~G~~~~~~~ev 318 (331)
T 2ajr_A 290 FLEMAKFGFASALAATRRKEKYMPDLEAI 318 (331)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcCcCCCCHHHH
Confidence 99999999999999999999988876553
No 42
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1.2e-42 Score=315.08 Aligned_cols=292 Identities=16% Similarity=0.219 Sum_probs=231.0
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+|+|++++|++..++++|++.+ ...++|..++..........+||++.|+|.+|++ + |.++.++|
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~----------~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~ 68 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHI----------LPDQVHLINLSFLVPTMRREFGGCAGNIAYALNL-L--GGDARMMG 68 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGC----------CTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHH-T--TCCEEEEE
T ss_pred cEEEECcceEEEEEecchhhhhhc----------cccccCCCCcceecccceeccCCHHHHHHHHHHH-c--CCCeeEEE
Confidence 799999999999998843332221 1124566666666677888999999999999998 4 59999999
Q ss_pred eecC-CchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 86 CIGK-DKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~-D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
.+|+ | +|+ +++.|++.||+++++. ..+.+|+.+++.++ +|++.+..+.+++..++++++.. . .++|+++
T Consensus 69 ~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~-----~-~~~~~v~ 140 (326)
T 3b1n_A 69 TLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE-----A-KDIKLAI 140 (326)
T ss_dssp EEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG-----C-CSCSEEE
T ss_pred EECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc-----c-cCCCEEE
Confidence 9999 9 899 9999999999999985 56678999998887 47776655666655555555432 2 7899999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+++. .++.+.++++.+++.+.++++|+.... .....+.+.++++++|++++|++|++.+++.... +.++
T Consensus 141 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~---~~~~--- 209 (326)
T 3b1n_A 141 VGPD----GFQGMVQHTEELAQAGVPFIFDPGQGL-PLFDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDE--- 209 (326)
T ss_dssp ECSC----CHHHHHHHHHHHHHHTCCEEECCGGGG-GGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCC---CHHH---
T ss_pred ECCc----cHHHHHHHHHHHHHCCCEEEEeCchhh-hhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCC---CHHH---
Confidence 9753 357888999999999999999996422 1112345678889999999999999999875422 2332
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
+. . +++.||||+|++|++++++++.+++|+++++ .++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 210 -l~------~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~ 279 (326)
T 3b1n_A 210 -IA------S-RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLM 279 (326)
T ss_dssp -HH------T-TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred -HH------h-cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 31 2 2678999999999999988888888877652 378999999999999999999999999999999999
Q ss_pred Hhhhhhhcccc--CCCCCC
Q 019402 323 ANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 323 aa~~v~~~g~~--~p~~~e 339 (341)
|+.++++.|+. +|+.+|
T Consensus 280 aa~~v~~~G~~~~~~~~~e 298 (326)
T 3b1n_A 280 GALKIAHQGPQTYAPTRAE 298 (326)
T ss_dssp HHHHHTSSSTTCCCCCHHH
T ss_pred HHHHHcCCCCCCCCCCHHH
Confidence 99999999984 566554
No 43
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=9e-43 Score=316.94 Aligned_cols=297 Identities=20% Similarity=0.214 Sum_probs=233.7
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++..++++|++.+ ...+.|..++..........+||++.|+|.++++ + |.++.++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i 77 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQL----------LPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGV-L--GGEVALV 77 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHH----------TTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred CeEEEECChhheEEEecChHHhhhh----------chhhccccccccccccceecCCChHHHHHHHHHH-c--CCCeEEE
Confidence 4899999999999998843333322 0114566666556677888999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+| +|+ +++.|++.||+++++. ..+.+|+.+++.++ +|++.+..+.+++..++++++.. ....++++|++|
T Consensus 78 ~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~ 153 (334)
T 2pkf_A 78 GAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD--VVSAIGKPELVI 153 (334)
T ss_dssp CEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSEEE
T ss_pred EEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCEEE
Confidence 999999 999 9999999999999885 45678999988887 57777766666665665554432 112357899999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+++. .++.+.++++.+++.+.++++|+.... .....+.+.++++++|++++|++|++.+++.... +.++
T Consensus 154 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~---~~~~--- 222 (334)
T 2pkf_A 154 IGAN----DPEAMFLHTEECRKLGLAFAADPSQQL-ARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGW---SEAD--- 222 (334)
T ss_dssp EESC----CHHHHHHHHHHHHHHTCCEEEECGGGG-GTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHCC---CHHH---
T ss_pred EcCC----ChHHHHHHHHHHHhcCCeEEEeccchh-hhhhHHHHHHHHhcCCEEecCHHHHHHHhccCCC---CHHH---
Confidence 9864 357888999999999999999996422 1112345778999999999999999999875422 2332
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCe-EEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGK-VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+ ... ++.||||+|++|++++++++ .+++|+++++ .++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 223 -l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~ 292 (334)
T 2pkf_A 223 -V------MAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSL 292 (334)
T ss_dssp -H------HTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -H------Hhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3 122 67899999999999998777 8888877652 37899999999999999999999999999999999
Q ss_pred HHhhhhhhcccc--CCCCCC
Q 019402 322 AANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 322 ~aa~~v~~~g~~--~p~~~e 339 (341)
+|+.++++.|+. +|+.+|
T Consensus 293 ~aa~~v~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 293 VAVLVLESTGTQEWQWDYEA 312 (334)
T ss_dssp HHHHHHTSSSSSCCCCCHHH
T ss_pred HHHHHHhCCCCCcCCCCHHH
Confidence 999999999984 566554
No 44
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=7.7e-43 Score=313.77 Aligned_cols=286 Identities=18% Similarity=0.200 Sum_probs=229.4
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.|++++|++..++ ++ .+++.....+....+||++.|+|.++++ | |.++.++|
T Consensus 2 i~tv~~n~~~D~~~~~~--------------------~~-~~g~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~~~ 57 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVE--------------------NF-QQGVVNRSERDRKQPGGKGINVSRVLKR-L--GHETKALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECT--------------------TC-CSSSEEECSEEEEEEECHHHHHHHHHHH-T--TCCCEEEE
T ss_pred EEEEecCchheEEEEcC--------------------Cc-ccCCeEEeceeEecCCchHHHHHHHHHH-c--CCCceEEE
Confidence 57899999999999998 32 4556666677889999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCc-hhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRP-EIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~ 164 (341)
.+|+ .+|+.+++.|++.||+++++...+ +|+.++.+ .+|+++.+...+ ..++++++... +.+..++++|++|++
T Consensus 58 ~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~v~~~ 132 (306)
T 2abq_A 58 FLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI-KGKQETELNGTA--PLIKKEHVQALLEQLTELEKGDVLVLA 132 (306)
T ss_dssp EEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE-ESSSCEEEBCCC--CCCCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred Eecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE-eCCceEEEECCC--CCCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 9998 799999999999999999986443 47777665 778776544433 24555444320 011115789999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
++.. ..+.+.+.++++.+++++.++++|+.+. .+.++++ ++|++++|++|+..+++....+.++..++++
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 204 (306)
T 2abq_A 133 GSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGE--------ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQ 204 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHH--------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 8653 3456889999999999999999999743 2567788 9999999999999998754333345566777
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.+ ...|++.||||+|++|++++.+++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 205 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~ 275 (306)
T 2abq_A 205 RL------IGEGIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAA 275 (306)
T ss_dssp HH------HHTTCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HH------HHcCCCEEEEecCCCceEEEeCCCEEEEeCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 77 455788999999999999998888888887654 889999999999999999999999999999999999
Q ss_pred HhhhhhhccccCCCCCC
Q 019402 323 ANVVIQRSGCTYPPKPE 339 (341)
Q Consensus 323 aa~~v~~~g~~~p~~~e 339 (341)
|+.++++. .+|+.+|
T Consensus 276 aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 276 GSATAFSD--GFCTREE 290 (306)
T ss_dssp HHHHHHSS--SCCCHHH
T ss_pred HHHHhcCc--CCCCHHH
Confidence 99999998 5666554
No 45
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=8.7e-43 Score=313.44 Aligned_cols=285 Identities=14% Similarity=0.167 Sum_probs=230.1
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.|++++|++..++ + |.+++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 2 i~tvt~n~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~~~ 57 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTN--------------------D-FKIDGLNRATATYKFAGGKGINVSRVLKT-L--DVESTALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECS--------------------S-CCTTSEEECSEEEEEEESHHHHHHHHHHH-T--TCCCEEEE
T ss_pred EEEEecCceEEEEEEcC--------------------C-cccCceEEeceeEecCCchHHHHHHHHHH-c--CCCeeEEE
Confidence 58899999999999987 3 45677777778899999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhh---hhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSI---VEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~ 162 (341)
.+|+ .+|+.+++.|++.||+++++...+ +|+.++.+ .+|+++.+...++ .+++++++. ..+. ++++|++|
T Consensus 58 ~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~ 130 (306)
T 2jg5_A 58 FAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL-KTGQETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVI 130 (306)
T ss_dssp EECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE-ESSSEEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEE
T ss_pred EecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE-cCCCEEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEE
Confidence 9999 699999999999999999986543 47777655 7787765554443 344444332 1111 56799999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 163 IAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
+++... ..+.+.+..+++.+++.+.++++|+.+.. +.++++ ++|++++|++|++.+++....+.+++.++
T Consensus 131 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 202 (306)
T 2jg5_A 131 VAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL--------AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKY 202 (306)
T ss_dssp EESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHH--------HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHH
T ss_pred EeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHH
Confidence 987643 33457889999999999999999997432 455666 69999999999999987533222345667
Q ss_pred HHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
++.+ ...|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 203 ~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 273 (306)
T 2jg5_A 203 GRLL------VDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQG---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAV 273 (306)
T ss_dssp HHHH------HHTTCSCEEEECGGGCEEEECSSEEEEEECCCC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHH------HHcCCCEEEEccCCCceEEEeCCcEEEEeCCcc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7777 455788999999999999998888888887655 7899999999999999999999999999999999
Q ss_pred HHHhhhhhhccccCCCCCCC
Q 019402 321 YAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 321 ~~aa~~v~~~g~~~p~~~e~ 340 (341)
++|+.++++.| +|+.+|+
T Consensus 274 a~aa~~v~~~G--~~~~~ev 291 (306)
T 2jg5_A 274 ACGTATAFDED--LATRDAI 291 (306)
T ss_dssp HHHHHHHTSSS--SCCHHHH
T ss_pred HHHHHHHcCCC--CCCHHHH
Confidence 99999999999 7776553
No 46
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.4e-42 Score=308.22 Aligned_cols=278 Identities=21% Similarity=0.257 Sum_probs=220.2
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC-
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG- 79 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~- 79 (341)
|+| +|+|+|++++|++.... .+....+||++.|+|.++++ ||.
T Consensus 1 M~~--~ilviG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~---LG~~ 44 (313)
T 3kd6_A 1 MSL--SLLVIGSLAFDDIETPF-------------------------------GRSDNTLGGSSTYIALSASY---FTDE 44 (313)
T ss_dssp --C--CEEEESCCEEEEEECSS-------------------------------CEEEEEEECHHHHHHHHHTT---TCSS
T ss_pred CCc--cEEEEeEEEEeeecCCC-------------------------------CcccccCCCHHHHHHHHHHH---hCCC
Confidence 554 89999999999996332 23468999999999999997 459
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEE--e-CCeeceeecccccccCCcccCCCchhHhhh
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (341)
++.++|.+|+| +|+.+++.|+++||+++++. ..+.+|....-.. + ++++.+....+....+.+. + .+.+
T Consensus 45 ~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 117 (313)
T 3kd6_A 45 PIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH-V-----PQYY 117 (313)
T ss_dssp CEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC-C-----CGGG
T ss_pred ceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc-c-----hHHH
Confidence 99999999999 99999999999999999985 4445553221111 1 2344443334443444432 1 2457
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
+++|++++++ ++++....+++.+ +.+.++++|+. ..|.....+.+.++++++|++++|++|++.|++ .+
T Consensus 118 ~~~~~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp~-~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~ 186 (313)
T 3kd6_A 118 RDSKFVCLGN----IDPELQLKVLDQI-DDPKLVVCDTM-NFWIEGKPEELKKVLARVDVFIVNDSEARLLSG-----DP 186 (313)
T ss_dssp TTCSEEEECS----SCHHHHHHHHTTC-SSCSEEEEECC-HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHS-----CS
T ss_pred ccCCEEEEcC----CCHHHHHHHHHHH-hhCCEEEEcCh-hhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhC-----CC
Confidence 8999999964 4566677777777 57788999994 455555566788899999999999999999987 45
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC-----
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK----- 310 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~----- 310 (341)
+.+++++.+ .+.|++.||||+|++|++++++++.+++|++++. +++|||||||+|+|||+++|++|+
T Consensus 187 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~vvdttGAGDaf~a~~~~~l~~g~~~~~~ 258 (313)
T 3kd6_A 187 NLVKTARII------REMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLE--SIYDPTGAGDTFAGGFIGHLARCGNTSEA 258 (313)
T ss_dssp CHHHHHHHH------HTTSCSEEEEECTTSCEEEEETTEEEEECCCTTC--CCSCCTTHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHH------HHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCC--CcCCCCCccHHHHHHHHHHHHcCCCcccc
Confidence 788899999 5678899999999999999999998898877542 689999999999999999999998
Q ss_pred CHHHHHHHHHHHHhhhhhhcccc---CCCCCCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCT---YPPKPEF 340 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~---~p~~~e~ 340 (341)
++++|+++|+++|+.+|++.|+. .|+++|+
T Consensus 259 ~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev 291 (313)
T 3kd6_A 259 EMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEV 291 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHH
Confidence 89999999999999999999995 4666553
No 47
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.3e-42 Score=309.22 Aligned_cols=276 Identities=18% Similarity=0.247 Sum_probs=219.7
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++. . ...+||++.|+|.++++ + |.++.+
T Consensus 3 ~~~v~viG~~~~D~~p-----------------------~-------------~~~~GG~~~N~A~~la~-L--G~~~~~ 43 (296)
T 2qhp_A 3 NNIIVGMGEALWDVLP-----------------------E-------------GKKIGGAPANFAYHVSQ-F--GFDSRV 43 (296)
T ss_dssp CCEEEEESCCEEEEET-----------------------T-------------EEEEECHHHHHHHHHHH-T--TCEEEE
T ss_pred cceEEEEchhheEecC-----------------------C-------------CCCCCCHHHHHHHHHHH-c--CCCeeE
Confidence 4489999999999972 1 26899999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccc-cccCCcccCCCchhHhhhhcceE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
+|.+|+|.+|+.+++.|++.|| +++. ..+.+|+.+++.++ +|+|++....+. ...+++. ....+.++++|+
T Consensus 44 ~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~ 117 (296)
T 2qhp_A 44 VSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFT----DELKRLALNTRA 117 (296)
T ss_dssp EEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCC----HHHHHHHHTEEE
T ss_pred EEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcc----hhhHhhhcCCCE
Confidence 9999999999999999999999 6664 44678999888776 688776555443 2333322 123356789999
Q ss_pred EEEecccc--ccCHHHHHHHHHHHHh-cCCeEEEeCCc--HHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 161 YYIAGFFL--TVSPESIQMVAEHAAA-KNKVFMMNLSA--PFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 161 v~i~~~~~--~~~~~~~~~~~~~~~~-~~~~v~~d~~~--~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
+|++++.. +.+.+.+..+++.+++ .+.++++|+.. ..| ..+.+.++++++|++++|++|++.+++....+.+
T Consensus 118 v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~---~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~ 194 (296)
T 2qhp_A 118 VCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFY---TKEVLRESFKRCNILKINDEELVTISRMFGYPGI 194 (296)
T ss_dssp EEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCC---CHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTS
T ss_pred EEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCcccc---CHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCC
Confidence 99987543 2245678888888877 68899999843 122 2345677888999999999999999987655556
Q ss_pred CHHHHHHHHhcCCCCCC-CCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 236 NVEEIALKISQWPKASG-THKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
+++++++.+ .. .|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++
T Consensus 195 ~~~~~~~~l------~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~ 265 (296)
T 2qhp_A 195 DLQDKCWIL------LAKYNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPE 265 (296)
T ss_dssp CHHHHHHHH------HHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHH
T ss_pred CHHHHHHHH------HHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHH
Confidence 788888888 33 3788999999999999998888888887755 7899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhccccCCC
Q 019402 315 CVRTGCYAANVVIQRSGCTYPP 336 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~~~p~ 336 (341)
|+++|+++|+.++++.|+..+.
T Consensus 266 a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 266 AHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp HHHHHHHHHHHHHTSSSSSCCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999996443
No 48
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=1.7e-42 Score=311.23 Aligned_cols=270 Identities=20% Similarity=0.228 Sum_probs=220.8
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+++|++++|++..++ ++| +++..........+||++.|+|.++++ + |.++.
T Consensus 19 ~~~~v~viG~~~iD~~~~~~--------------------~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~ 74 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVD--------------------SIP-REGSVNVKDLRPRFGGTAGNFAIVAQK-F--RIPFD 74 (306)
T ss_dssp CCEEEEEECCCEEEEEEECS--------------------CCC-SSEEEECSEEEEEEEHHHHHHHHHHHH-T--TCCCE
T ss_pred CCCcEEEECCceEEEEEecC--------------------CCC-CCceEECcceEecCCChHHHHHHHHHH-c--CCCeE
Confidence 35689999999999999887 466 566666677788999999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+| +|+.+++.|++.||+++++ +.++.+|+.+++++++|+|+++.+.+++..++ +++. .++|++
T Consensus 75 ~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~ga~~~~~-~~l~--------~~~~~v 144 (306)
T 3bf5_A 75 LYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGAMAAWA-PQLA--------DEYEYV 144 (306)
T ss_dssp EEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECTHHHHCC-CCCC--------SCEEEE
T ss_pred EEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCChhhhhh-Hhhc--------CCCCEE
Confidence 99999999 9999999999999999997 45667899999988778888877777666665 3331 579999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
|+++.. .+.++++.+++ ++++|+....+. ...+.+.++++++|++++|++|++.+++....+..
T Consensus 145 ~~~~~~------~~~~~~~~a~~---~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~------ 208 (306)
T 3bf5_A 145 HFSTGP------NYLDMAKSIRS---KIIFDPSQEIHK-YSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP------ 208 (306)
T ss_dssp EECSSS------SHHHHHHHCCS---EEEECCGGGGGG-SCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC------
T ss_pred EECChH------HHHHHHHHhCC---cEEEcCchhhhh-ccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc------
Confidence 998743 45667776654 899999753321 12455778889999999999999999875422110
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
.+ . ||||+|++|++++++++.+++|++++ + +|||||||+|+|||+++|++|+++++|+++|++
T Consensus 209 -~l------~------vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~ 271 (306)
T 3bf5_A 209 -KV------T------TIVTNGERGSSLFMDGKKYDFPAIPS---S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTI 271 (306)
T ss_dssp -SS------C------EEEEEGGGEEEEEETTEEEEEECCCC---C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -cE------E------EEEeecccCeEEEeCCcEEEecCCcC---C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 12 1 99999999999998888888887755 7 999999999999999999999999999999999
Q ss_pred HHhhhhhh--ccc--cCCCCCC
Q 019402 322 AANVVIQR--SGC--TYPPKPE 339 (341)
Q Consensus 322 ~aa~~v~~--~g~--~~p~~~e 339 (341)
+|+.++++ .|+ .+|+.+|
T Consensus 272 ~aa~~v~~~~~G~~~~~p~~~e 293 (306)
T 3bf5_A 272 IAHHVIDDGIENFSLNMEDLER 293 (306)
T ss_dssp HHHHHHHHCSTTCCCCHHHHHH
T ss_pred HHHHHhccCCccccccCCCHHH
Confidence 99999999 998 3555443
No 49
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.5e-41 Score=311.03 Aligned_cols=295 Identities=16% Similarity=0.187 Sum_probs=228.9
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|+.+.++...-. .......+....+||++.|+|.++++ | |.++.++
T Consensus 13 ~~~~~~ge~l~~~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i 64 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDH-------------------------KRIFQTDSFDVTYGGAEANVAAFLAQ-M--GLDAYFV 64 (351)
T ss_dssp CEEEEESCCEEEEECSTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH-T--TSEEEEE
T ss_pred ceEEEechhhheecCCCC-------------------------ccccccceeeEecCChHHHHHHHHHH-c--CCCeEEE
Confidence 489999999988664211 11234567788999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCee-ceeeccc---ccccCCcccCCCchhHhhhhcceE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER-SLVANLS---AANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..++++| .++.+.. +...++++++. ....++++|+
T Consensus 65 ~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~---~~~~~~~~~~ 141 (351)
T 2afb_A 65 TKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFD---WEKILDGARW 141 (351)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCC---HHHHTTTEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCC---HHHhhcCCCE
Confidence 999999999999999999999999986556678888776655555 3344332 22355555554 1234689999
Q ss_pred EEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCCc--HHHH-hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC--
Q 019402 161 YYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLSA--PFIC-EFFREPQEKALPYMDYVFGNETEARTFAKVHGW-- 232 (341)
Q Consensus 161 v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-- 232 (341)
+|++++.+..+ .+.+.++++.+++.++++++|+.. ..|. ...++.+.++++++|++++|++|+..|++....
T Consensus 142 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~ 221 (351)
T 2afb_A 142 FHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGL 221 (351)
T ss_dssp EEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC
T ss_pred EEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccc
Confidence 99998764333 378889999999999999999963 1221 123456778999999999999999999875321
Q ss_pred -------CCCCHHHHHHHHhcCCCCCCC-CccEEEEeeCCCCE--------EEEeCCeEEEEecccCCCCcccCCCCcch
Q 019402 233 -------ETDNVEEIALKISQWPKASGT-HKRITVITQGADPV--------VVAEDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 233 -------~~~~~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~--------~~~~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
+.++++++++.+ ... +++.||||+|++|+ +++.+++.+++|++++ +++|||||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGD 292 (351)
T 2afb_A 222 DLKTGKLNREAYAKIAEEV------TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGD 292 (351)
T ss_dssp -------CHHHHHHHHHHH------HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHHH
T ss_pred cccccccchhhHHHHHHHH------HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCchH
Confidence 112355667777 332 78899999999975 7777888888887765 7899999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhccc-cCCCCCC
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC-TYPPKPE 339 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~-~~p~~~e 339 (341)
+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+.+|
T Consensus 293 aF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 293 SFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999999999999999999999998 5666554
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=9.4e-39 Score=285.95 Aligned_cols=254 Identities=18% Similarity=0.139 Sum_probs=199.2
Q ss_pred CCceeecCchhHHHHHHHHHHhCCCCceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceee
Q 019402 54 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVA 133 (341)
Q Consensus 54 ~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~ 133 (341)
.+....+||++.|+|.++++ + |.++.++|.+|+|. +.+++.|++.||+++++.. +.+|+.+.+...+|+++++.
T Consensus 29 ~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~~~~g~~~~~~ 102 (298)
T 1vk4_A 29 GKREIAYGGGVVMGAITSSL-L--GVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRYGSDPDTRESF 102 (298)
T ss_dssp TEEEEEEECHHHHHHHHHHH-T--TCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC-----CCEEE
T ss_pred CeEEEecCCHHHHHHHHHHH-c--CCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEEcCCCCeeEEE
Confidence 45678999999999999998 4 59999999999997 7788999999999999864 34565555543368888777
Q ss_pred cccccccCCcccCCCchhHhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHh--------hhhHH
Q 019402 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICE--------FFREP 205 (341)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~--------~~~~~ 205 (341)
+.+++..++++++.. ..+++++++++.. .+...++++.+++++.++++|+.+ .... ...+.
T Consensus 103 ~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~~~g~~v~~D~~~-~~~~~~~~~~~~~~~~~ 171 (298)
T 1vk4_A 103 LISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLRRKVMFLSADAQG-FVRVPENEKLVYRDWEM 171 (298)
T ss_dssp EEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHHHHCSEEEEETHH-HHEEEETTEEEECCCTT
T ss_pred eccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHHHcCCEEEEecCc-cccccccccccccchHH
Confidence 767666666665531 5789999987632 122346667778889999999964 2110 11124
Q ss_pred HHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCC
Q 019402 206 QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPK 285 (341)
Q Consensus 206 ~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~ 285 (341)
+.++++++|++++|++|++.|++ .++++++++.+ ...|++.||||+ ++|++++++ +.+++|++++
T Consensus 172 ~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v-- 236 (298)
T 1vk4_A 172 KEKYLKYLDLFKVDSREAETLTG-----TNDLRESCRII------RSFGAKIILATH-ASGVIVFDG-NFYEASFRSW-- 236 (298)
T ss_dssp HHHHGGGCSEEEEEHHHHHHHHS-----CSCHHHHHHHH------HHTTCSSEEEEE-TTEEEEESS-SEEEEECCCS--
T ss_pred HHhhcccCCEEecCHHHHHHHhC-----CCCHHHHHHHH------HhcCCCEEEEEc-CCCcEEEeC-CEEEeccCCc--
Confidence 67789999999999999999987 34688888888 456788999999 999999877 7778886644
Q ss_pred CcccCCCCcchhhHHHHHHHHhc-CCCHHHHHHHHHHHHhhhhhhcccc-CCCCCCC
Q 019402 286 EKLVDTNGAGDAFVGGFLSQLVQ-EKPVEDCVRTGCYAANVVIQRSGCT-YPPKPEF 340 (341)
Q Consensus 286 ~~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~~g~~-~p~~~e~ 340 (341)
+++|||||||+|+|||+++|++ |+++++|+++|+++|+.++++.|+. .|+.+|+
T Consensus 237 -~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~el 292 (298)
T 1vk4_A 237 -SLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRREDLEAI 292 (298)
T ss_dssp -SGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCGGGGGGC
T ss_pred -ccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 8999999999999999999999 9999999999999999999999994 4566655
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.92 E-value=1.1e-25 Score=202.48 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=153.2
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEeecC--CCCcceEEEEEeCCeeceeecccccccCCcccCCC-chhHhh--
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDE--SAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR-PEIWSI-- 154 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 154 (341)
.+.++|.+|+|. |+++ |+++||+++++... ..+|++.+ ..+ ..++++++.. .+.+..
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~~~~~~~~~~ 73 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQELYEGLRLNN 73 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHHHHHHHHHTT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHHHHHHHHhcC
Confidence 467889999998 9988 99999999987531 12233221 111 2344444432 011111
Q ss_pred hhcceEEEEeccccc-cCHHHHHHHHHHHHhcCCe--EEEeCCcH--------HH-HhhhhHHHHh-hCCCCcEEEcCHH
Q 019402 155 VEKAKYYYIAGFFLT-VSPESIQMVAEHAAAKNKV--FMMNLSAP--------FI-CEFFREPQEK-ALPYMDYVFGNET 221 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~--v~~d~~~~--------~~-~~~~~~~~~~-~l~~~dil~~n~~ 221 (341)
+.++|++++ |+... ...+.+.++++.++++|.+ +++||... .| .....+.+.+ +++++|++++|++
T Consensus 74 ~~~~~~v~~-G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~ 152 (312)
T 2yxt_A 74 MNKYDYVLT-GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQF 152 (312)
T ss_dssp CCCCSEEEE-CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHH
T ss_pred CccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHH
Confidence 567899876 43221 1135566888989888854 88997421 11 1123344554 8999999999999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC------CEEEE-------eC-C----eEEEEecccC
Q 019402 222 EARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD------PVVVA-------ED-G----KVKLFPVILL 283 (341)
Q Consensus 222 E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~-------~~-~----~~~~v~~~~~ 283 (341)
|++.|++....+.++.+++++.+ ...|++.||||.|+. |++++ .+ + ..++++++++
T Consensus 153 Ea~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (312)
T 2yxt_A 153 EAELLSGRKIHSQEEALRVMDML------HSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV 226 (312)
T ss_dssp HHHHHHSCCCCSHHHHHHHHHHH------HHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC
T ss_pred HHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc
Confidence 99999875433334567777877 456789999998876 47765 44 2 5677887665
Q ss_pred CCCcccCCCCcchhhHHHHHHHHhc-CCCHHHHHHHHHHHHhhhhhhc
Q 019402 284 PKEKLVDTNGAGDAFVGGFLSQLVQ-EKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 284 ~~~~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++ ||+||||+|+|+|+++|++ |+++++|+++|+++|+.++++.
T Consensus 227 ---~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~ 270 (312)
T 2yxt_A 227 ---DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRT 270 (312)
T ss_dssp ---SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 55 9999999999999999999 9999999999999998888653
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.91 E-value=2.1e-24 Score=191.32 Aligned_cols=227 Identities=14% Similarity=0.108 Sum_probs=157.9
Q ss_pred CceEE-EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCC-chhH-h-
Q 019402 79 GATSY-IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKR-PEIW-S- 153 (341)
Q Consensus 79 ~~v~l-i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~- 153 (341)
+.... +|.+|.| .....|++.|+++.++.. . +..+ .|.+.+ .+ ..++++.+.. .+.+ +
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhc
Confidence 55444 7888877 346788999999998742 1 1112 343331 11 2333343321 0111 1
Q ss_pred -hhhcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcH-----HHH-hh-hhHHHHhhCCCCcEEEcCHHHH
Q 019402 154 -IVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAP-----FIC-EF-FREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 154 -~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~-----~~~-~~-~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.++++++++++........+.+.++++.+++ .++++++||... .|. .. ......++++++|++++|++|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 3457899998654332234677888888887 789999997421 111 11 1222346889999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC-------CEEEEeCCeEEEEecccCCCCcccCCCCcch
Q 019402 224 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-------PVVVAEDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-------G~~~~~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
+.|++....+.++..++++++ ...+++.||||.|++ |++++++++.++++++++ . +||+||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999985433334567778888 667899999999999 889988888888887654 4 79999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhccc
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~ 332 (341)
+|+|+|+++|++|+++++|+++|+++++.++++...
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987643
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.89 E-value=4.3e-23 Score=183.26 Aligned_cols=161 Identities=11% Similarity=0.077 Sum_probs=121.9
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcCCe-EEEeCCcH------HHHhhhhHHHHh-hCCCCcEEEcCHHHHHHHHhh
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKV-FMMNLSAP------FICEFFREPQEK-ALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-v~~d~~~~------~~~~~~~~~~~~-~l~~~dil~~n~~E~~~l~~~ 229 (341)
+|++++.. ..+.+.+..+++.+++.+.+ +++||... .+.....+.+.+ +++++|++++|++|++.|++.
T Consensus 95 ~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 95 IDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp CSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 68887753 22678889999999999986 99997532 111111233443 789999999999999999875
Q ss_pred -cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 230 -HGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 230 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
...+.++.+++++++ .+.+++.||+|.|++| ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 172 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 172 PHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAALA 242 (288)
T ss_dssp CCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHHH
Confidence 333334566777787 4567889999999999 88887777777776544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|++|+++++|+++|+++++.++++.
T Consensus 243 a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 243 ALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999876
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.85 E-value=6.1e-21 Score=166.74 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=125.6
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcC-CeEEEeCCcH------HHHhhhhHHH-HhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSAP------FICEFFREPQ-EKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~~------~~~~~~~~~~-~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.+.+++.. + .+.+.+..+++.+++.+ .++++|+... .|.....+.+ .++++++|++++|++|++.|++
T Consensus 70 ~~~~v~~G~--l-~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGA--L-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC--C-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECC--c-CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 367777653 1 25677888899999888 8999998432 1211112234 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC-C----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-P----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-G----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
....+.++..++++++ ...|++.||+|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l------~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 5433334566778888 456788999999998 8 78888888888887654 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
+++++|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.82 E-value=9.1e-20 Score=160.43 Aligned_cols=162 Identities=16% Similarity=0.154 Sum_probs=127.0
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCC-eEEEeCCcH--H----HHhhhhHHHH-hhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNK-VFMMNLSAP--F----ICEFFREPQE-KALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~d~~~~--~----~~~~~~~~~~-~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.|++++... .+.+.+..+++.+++.+. ++++||... . +.....+.+. ++++++|++++|.+|++.|++
T Consensus 74 ~~d~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGML---PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCC---CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5788888542 236788889999999888 599997421 1 1111223454 688999999999999999987
Q ss_pred hc-CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC--CCE----EEEeCCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 VH-GWETDNVEEIALKISQWPKASGTHKRITVITQGA--DPV----VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~----~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
.. ..+.++..++++++ .+.+++.||+|.|. +|+ +++++++.++++++++ +++||+||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKI------HALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHH------HTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH------HHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 54 33333566778888 55678999999999 784 6777777778887654 789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|++++++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.81 E-value=7.6e-20 Score=162.24 Aligned_cols=167 Identities=13% Similarity=0.123 Sum_probs=126.5
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhcC--CeEEEeC----Cc--HHHHhhhhHHHH-hhCCCCcEEEcCHHHHHH
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN--KVFMMNL----SA--PFICEFFREPQE-KALPYMDYVFGNETEART 225 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~--~~v~~d~----~~--~~~~~~~~~~~~-~~l~~~dil~~n~~E~~~ 225 (341)
.+.|++. .|+.. ....+.+.++++.+++.+ .++++|| .+ ..+.+...+.++ .+++++|++++|..|++.
T Consensus 76 ~~~d~v~-~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 154 (289)
T 3pzs_A 76 KDCDAVL-SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQ 154 (289)
T ss_dssp GGCCEEE-ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCCEEE-ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHH
Confidence 5788864 45432 223467888888888766 7899996 21 223333334455 478899999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeC-CCCE-------EEEeCCeEEEEecccCCCCcccCCCCcchh
Q 019402 226 FAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQG-ADPV-------VVAEDGKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 226 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G-~~G~-------~~~~~~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
|++....+.++..++++++ .+.|++.|+||.| .+|+ +++++++.++++.++++ +.++|++||||+
T Consensus 155 L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dt~GaGD~ 227 (289)
T 3pzs_A 155 LSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVD-FGKRQPVGVGDL 227 (289)
T ss_dssp HHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCC-CTTSCCTTHHHH
T ss_pred HhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeec-CCCCCCCcHHHH
Confidence 9986544445667788888 5678999999985 4786 77777777888766552 223899999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+|+|++++++|+++++|+++|+++++.++++.
T Consensus 228 f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 228 TSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988887764
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.80 E-value=9.6e-19 Score=154.29 Aligned_cols=161 Identities=15% Similarity=0.098 Sum_probs=127.2
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhc-CCeEEEeCCc----HHH---HhhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAK-NKVFMMNLSA----PFI---CEFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~v~~d~~~----~~~---~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.|.+.+.- -.+++.+..+.+.+++. +.++++||-- ..| .+...+.++++++++|++++|..|++.|++
T Consensus 74 ~~daik~G~---l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGY---VGSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECC---CCCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 578888742 12566666666666664 5789999931 112 233445567899999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCC-CCc-cEEEEeeCC----CCEEEEe-CCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASG-THK-RITVITQGA----DPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~vvvt~G~----~G~~~~~-~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
....+.++.+++++++ .+ .|+ +.|+||.|. .|+++++ +++.++++.+++ . +|++|+||+|+|+
T Consensus 151 ~~~~~~~~~~~aa~~L------~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v---~-~dt~GaGD~fsaa 220 (282)
T 3h74_A 151 APYQVTPDLEVILPAL------QAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL---P-GHYNGTGDTLAAV 220 (282)
T ss_dssp CCCCSSCCHHHHHHHH------HTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC---S-SCCTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC---C-CCCcCHHHHHHHH
Confidence 7655567899999999 55 688 899999984 7888884 667777776644 3 8999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+++|++|+++++|+++|+++++.++++.
T Consensus 221 i~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 221 IAGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998864
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.77 E-value=2e-18 Score=153.01 Aligned_cols=164 Identities=11% Similarity=0.042 Sum_probs=121.4
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcH----HHH---hhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP----FIC---EFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~----~~~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
..|.+.+.-....-..+.+.++++.+++.+.++++||-.. .|. +...+.++++++++|++++|..|++.|++.
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~ 156 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDE 156 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCC
Confidence 5678887422111123566666666665678999999432 121 233445678999999999999999999985
Q ss_pred cCC---CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC-------CCEEEEeC--CeEEEEecccCCCCcccCCCCcchh
Q 019402 230 HGW---ETDNVEEIALKISQWPKASGTHKRITVITQGA-------DPVVVAED--GKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 230 ~~~---~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~-------~G~~~~~~--~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
... +.++.+++++++ .+.|++.|+||.|. .|++++++ ++.++++.+++ . +|++|+||+
T Consensus 157 ~~~~~~~~~~~~~aa~~L------~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~GaGD~ 226 (291)
T 3mbh_A 157 PYKADSTDEELKEYLRLL------SDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGTGDT 226 (291)
T ss_dssp CCCSCCCHHHHHHHHHHH------HHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTHHHH
T ss_pred CCCCCCCHHHHHHHHHHH------HhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCChHHH
Confidence 432 234567788888 55688999999653 57788876 35667776543 4 899999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+|+|+++|++|+++++|+++|+++++.++++.
T Consensus 227 f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 227 FTSVITGSLMQGDSLPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988888764
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.76 E-value=2.9e-18 Score=152.54 Aligned_cols=163 Identities=13% Similarity=0.068 Sum_probs=117.7
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhcC------CeEEEeCC----cHHH-HhhhhHHHHhhCCCCcEEEcCHHHH
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN------KVFMMNLS----APFI-CEFFREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~------~~v~~d~~----~~~~-~~~~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.++|+|.+ |+.. ....+.+.++++.+++.+ .++++||- +..| .+...+.++++++++|+++||..|+
T Consensus 75 ~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea 153 (300)
T 3zs7_A 75 SNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEA 153 (300)
T ss_dssp GGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHH
T ss_pred ccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHH
Confidence 46787665 4322 112356667777776654 68999982 1122 2234455677999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-------EEEEeC------CeEEEEecccCCCCcccC
Q 019402 224 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-------VVVAED------GKVKLFPVILLPKEKLVD 290 (341)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-------~~~~~~------~~~~~v~~~~~~~~~vvd 290 (341)
+.|++....+.++.+++++.| .+.|++.|+||.|..| +++..+ ++.++++.+++ +. |
T Consensus 154 ~~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~ 223 (300)
T 3zs7_A 154 SLLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-R 223 (300)
T ss_dssp HHHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-C
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-C
Confidence 999986544445667788888 5568899999999988 333334 46777777665 44 8
Q ss_pred CCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 291 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 291 ttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|+||+|+|+|+++| +|+++++|+++|.++...++++.
T Consensus 224 ~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 224 YTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp BTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999977776543
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.66 E-value=5.1e-16 Score=136.11 Aligned_cols=166 Identities=16% Similarity=0.080 Sum_probs=111.0
Q ss_pred HhhhhcceEEEEeccccc-cCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHHh
Q 019402 152 WSIVEKAKYYYIAGFFLT-VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAK 228 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~ 228 (341)
.+.+..++++++..-.+. ...+.+..+++.+++.++++++|+..........+...++++ +.|++++|..|+..|++
T Consensus 53 ~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g 132 (272)
T 1ekq_A 53 ADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVG 132 (272)
T ss_dssp HHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC
T ss_pred HHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhC
Confidence 355678899988432221 113567778888889999999999743111111223345555 89999999999999987
Q ss_pred hc-C--------CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 229 VH-G--------WETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 229 ~~-~--------~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
.. . .+.++..++++.+.+ .....|++| |+.+ +++++++.++++.... .+.|++|+||+|+
T Consensus 133 ~~~~~~~gvd~~~~~~~~~~aa~~l~~------~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~---~~~~ttGaGD~la 201 (272)
T 1ekq_A 133 VTDWLIKGVDAGEGGGDIIRLAQQAAQ------KLNTVIAIT-GEVD-VIADTSHVYTLHNGHK---LLTKVTGAGCLLT 201 (272)
T ss_dssp ---------------HHHHHHHHHHHH------HHTSEEEEC-SSSE-EEECSSCEEEECCCCG---GGGGSTTHHHHHH
T ss_pred CCcccccCccCCCCHHHHHHHHHHHHH------HcCCEEEEE-CCCC-EEEeCCEEEEEcCCCc---cccCccCchHHHH
Confidence 53 2 123345567777732 223345555 8877 5566666777765432 6679999999998
Q ss_pred HHHHHHHhcCCCHHHHHHHHHH----HHhhhhh
Q 019402 300 GGFLSQLVQEKPVEDCVRTGCY----AANVVIQ 328 (341)
Q Consensus 300 a~~~~~l~~g~~~~~a~~~A~~----~aa~~v~ 328 (341)
|.+.+.+.+|.++++|+++|++ ++....+
T Consensus 202 g~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 202 SVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888889999999999986 4544443
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.1e-14 Score=139.86 Aligned_cols=159 Identities=13% Similarity=0.146 Sum_probs=113.6
Q ss_pred cceEEEEeccccccCHHH---HHHHHHHHHhcCCeEEEeCCc------HHHHhhhhHHHH-hhCCCCcEEEcCHHHHHHH
Q 019402 157 KAKYYYIAGFFLTVSPES---IQMVAEHAAAKNKVFMMNLSA------PFICEFFREPQE-KALPYMDYVFGNETEARTF 226 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~---~~~~~~~~~~~~~~v~~d~~~------~~~~~~~~~~~~-~~l~~~dil~~n~~E~~~l 226 (341)
+.|.|.++.. +.+. +.++++..++.+.++++||-- ..+.....+.+. ++++.+|+++||..|++.|
T Consensus 91 ~~daIkiG~l----s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML----TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC----CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC----CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6788888643 5544 445555555458899999932 122222333344 7889999999999999999
Q ss_pred Hhhc--CCCCCCHHHHHHHHhcCCCCCCCCc-cEEEEeeCCCC--------E--EEE--eCCeEEEEecccCCCCcccCC
Q 019402 227 AKVH--GWETDNVEEIALKISQWPKASGTHK-RITVITQGADP--------V--VVA--EDGKVKLFPVILLPKEKLVDT 291 (341)
Q Consensus 227 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G--------~--~~~--~~~~~~~v~~~~~~~~~vvdt 291 (341)
++.. ..+.++..++++++ .+.+. +.||||.|..+ + +++ .+++.++++.+.+ +++||
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L------~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDL------AKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHH------HHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHH------HHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9853 23345677888888 44455 78999998753 3 455 4567777776654 67899
Q ss_pred CCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhh
Q 019402 292 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 292 tGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
+|+||+|+|+++++|++|.++++|+++|+..-...++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999965444443
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.30 E-value=2.4e-11 Score=105.77 Aligned_cols=161 Identities=14% Similarity=0.085 Sum_probs=107.7
Q ss_pred hHhhhhcceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTF 226 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l 226 (341)
..+.++.+|++++..-.+ +. +.+..+++.+++.++++++|+..........+...++++ ..+++.||..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 446778899999965322 33 356667788888999999999752111111122233332 289999999999999
Q ss_pred HhhcC----CC----C-CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchh
Q 019402 227 AKVHG----WE----T-DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 227 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
++... .+ . ++..++++++.+ .+...|++| |..+ ++++++..+.++.... ...+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~------~~~~~Vvlk-G~~d-~i~~~~~~~~~~~g~~---~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAR------EFNTTVAVT-GAVD-YVSDGRRTFAVYNGHE---LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHH------HTTSEEEEE-SSSE-EEECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHH------HhCcEEEEc-CCCc-EEEcCCEEEEEcCCCc---CcCCccChhHH
Confidence 98652 11 1 345567777743 233456666 8766 4556667777765322 45599999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANV 325 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~ 325 (341)
|+|.+.+.+++|.+ .+|+..|...-+.
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~ 223 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTFGI 223 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHHHH
Confidence 99999999999999 8888777654333
No 63
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.05 E-value=1.2e-09 Score=96.94 Aligned_cols=155 Identities=17% Similarity=0.151 Sum_probs=95.1
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcHHHHhhhhHHHHhhC--CCCcEEEcCHHHHHHHHh
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAPFICEFFREPQEKAL--PYMDYVFGNETEARTFAK 228 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~~~~~~~~~~~~~~l--~~~dil~~n~~E~~~l~~ 228 (341)
..++..|++.+.. .+..+.+....+.+.++. .+.++++|+.+........ +++ +..++++||..|++.|++
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~~l~~~~~~viTPN~~E~~~L~g 181 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGN----FSLTYPEKVVFTPHQMEWQRLSH 181 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTT----CCCSSGGGEEEECCHHHHHHHHC
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccch----hhhcCCCCEEEcCCHHHHHHHhC
Confidence 4456789999863 122233333333333333 4789999996544321111 123 357899999999999987
Q ss_pred hcCCCCC-CH-HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHH
Q 019402 229 VHGWETD-NV-EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL 306 (341)
Q Consensus 229 ~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l 306 (341)
....+.+ +. .++++++ ++ +|+..| .+.++++++..+. ... ..+..+++|+||+++|.+.+.+
T Consensus 182 ~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~~-~~~---g~~~~~t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 182 LPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPFQ-NTG---GNPGMATGGTGDTLAGIIAGFL 245 (310)
T ss_dssp CCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCEE-CCC---CCGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEEE-ECC---CCCCCCCCChHHHHHHHHHHHH
Confidence 5432222 33 5566665 22 455556 4666766444443 333 2367899999999744444445
Q ss_pred hcCCCHHHHHHHHHHHHhhhhh
Q 019402 307 VQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 307 ~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
++|.++.+|+.+|+++.+..-.
T Consensus 246 A~g~~~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 246 AQFKPTIETIAGAVYLHSLIGD 267 (310)
T ss_dssp HHSCSSHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999877666443
No 64
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.05 E-value=6e-10 Score=98.88 Aligned_cols=156 Identities=10% Similarity=0.069 Sum_probs=95.4
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcHHHHhhhhHHHHhh-C-CCCcEEEcCHHHHHHHHh
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAPFICEFFREPQEKA-L-PYMDYVFGNETEARTFAK 228 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~~~~~~~~~~~~~~-l-~~~dil~~n~~E~~~l~~ 228 (341)
+.++..|.+.+.. .+..+.+....+.+.++. .++++++|+.......... .+ + +..++|+||..|++.|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRK----PAIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHCC-----CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccCh----hhcCCCCCEEECCcHHHHHHHhC
Confidence 4556789999963 122233333333333333 4789999996544221111 12 3 468899999999999987
Q ss_pred hcCCCC-CCH-HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHH-
Q 019402 229 VHGWET-DNV-EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ- 305 (341)
Q Consensus 229 ~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~- 305 (341)
....+. ++. .++++++ .+ + .+|+..| .+.++++++..+. .... .+..+++|+||++ +|++++
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g--~~VvlkG-~~~~i~~~~~~~~-~~~~---~~~~~t~GtGD~L-ag~iaa~ 260 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-E--TILVAKS-HQTKIYQGQKIGH-IQVG---GPYQATGGMGDTL-AGMIAGF 260 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-T--CEEEECS-SSCEEEETTEEEE-ECCC---CGGGCSTTHHHHH-HHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-C--CEEEEeC-CCeEEEECCEEEE-ECCC---CCCCCCCcHHHHH-HHHHHHH
Confidence 543322 123 4555555 34 3 3455556 4677777554543 3333 3678999999998 555555
Q ss_pred Hhc-CCCHHHHHHHHHHHHhhhhh
Q 019402 306 LVQ-EKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 306 l~~-g~~~~~a~~~A~~~aa~~v~ 328 (341)
+++ |.++++|+++|+++.+..-+
T Consensus 261 lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 261 VAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHH
Confidence 569 99999999999877766443
No 65
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.91 E-value=2.2e-08 Score=86.81 Aligned_cols=160 Identities=18% Similarity=0.134 Sum_probs=105.3
Q ss_pred hhHhhhhcceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC-CCCcEEEcCHHHHHH
Q 019402 150 EIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEART 225 (341)
Q Consensus 150 ~~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~ 225 (341)
+..+..+.++.+++..-.+ +. +.+...++.+++.++++++||-.-.......+...+++ ...++|.+|..|+..
T Consensus 51 e~~e~~~~a~alvIn~G~l--~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGHL--SQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCSC--CHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCCC--ChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 4556778899999975432 33 45667777788899999999954221111112222222 368999999999999
Q ss_pred HHhhcCC----CC-------C---CHHHHHHHHhcCCCCCCCCc-cEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccC
Q 019402 226 FAKVHGW----ET-------D---NVEEIALKISQWPKASGTHK-RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVD 290 (341)
Q Consensus 226 l~~~~~~----~~-------~---~~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvd 290 (341)
|++.... +. + +..++++++.+ ... ..|++| |.. -+++++++.+.++.... ..-+
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~------~~~~~~Vvlk-G~~-D~i~dg~~~~~~~~G~~---~~~~ 197 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQ------KFPQTVFLAT-GIQ-DVLVSQEQVIVLQNGVP---ELDC 197 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHH------HSTTCEEEEE-SSS-EEEECSSCEEEECCCCG---GGGS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHH------HhCCeEEEEE-CCe-eEEEcCCEEEEeCCCCc---ccCC
Confidence 9885421 11 1 33456666632 223 556666 543 35556666666654321 3456
Q ss_pred CCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 291 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 291 ttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
++|.||++.|.+.+.+.+|.++.+|+..|...
T Consensus 198 v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 198 FTGTGDLVGALVAALLGEGNAPMTAAVAAVSY 229 (273)
T ss_dssp STTHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 79999999999999999999999998887665
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.84 E-value=1.5e-08 Score=95.43 Aligned_cols=158 Identities=13% Similarity=0.097 Sum_probs=101.6
Q ss_pred HhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 152 WSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
.+.++.+|++++..- +..+......+.+.+++.++++++|+....... .+.+ +..+..++++||..|+..|++...
T Consensus 315 ~~~~~~~davviGpG-lg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~~~ 390 (502)
T 3rss_A 315 LELSKDVDVVAIGPG-LGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKKTV 390 (502)
T ss_dssp HHHHTTCSEEEECTT-CCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTCCH
T ss_pred HHHhccCCEEEEeCC-CCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCCCc
Confidence 346778999999752 122222333333355667899999986543211 1222 234567899999999999987432
Q ss_pred CC-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 232 WE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.+ .++ .++++++.+ .. ..+|+..|. +.++++.+..+..+ .. ...++|+|+||+++|.+.+.+++|.
T Consensus 391 ~~~~~d-~~aa~~la~------~~-~~~VvlKG~-~~vi~~~~~~~~~~-~g---~~~~at~GsGD~Lag~iaa~lA~g~ 457 (502)
T 3rss_A 391 GDVKYN-YELAEEFAK------EN-DCVLVLKSA-TTIVTDGEKTLFNI-TG---NTGLSKGGSGDVLTGMIAGFIAQGL 457 (502)
T ss_dssp HHHTTC-HHHHHHHHH------HH-TSEEEECSS-SEEEECSSCEEEEC-CC---CGGGSSTTHHHHHHHHHHHHHHTTC
T ss_pred cchHHH-HHHHHHHHH------Hc-CCEEEEeCC-CeEEEcCCEEEEEC-CC---CCccccCCchHHHHHHHHHHHhCCC
Confidence 11 234 566777632 11 235556665 55666666555433 22 2667999999998888888888999
Q ss_pred CHHHHHHHHHHHHhhh
Q 019402 311 PVEDCVRTGCYAANVV 326 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~ 326 (341)
++.+|+.+|+..-+..
T Consensus 458 ~~~~Aa~~A~~~hg~A 473 (502)
T 3rss_A 458 SPLEASTVSVYLHGFA 473 (502)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999998776654
No 67
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.83 E-value=1.9e-07 Score=86.18 Aligned_cols=215 Identities=12% Similarity=0.034 Sum_probs=122.6
Q ss_pred ceEEEecCceeeeEeecCHHHHHHc----CCC----------------------------CC---ceEEecCcccchHHH
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKY----DIK----------------------------LN---NAILAEDKHLPMYDE 49 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~----~~~----------------------------~~---~~~~~~~~~~p~~~~ 49 (341)
..|++-=+.++|.+.+++++-++++ +.. .| +..+.+. .+...-.
T Consensus 28 ~~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~-~~~~~~~ 106 (474)
T 3drw_A 28 LSIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNE-KMNEWFD 106 (474)
T ss_dssp CEEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCT-THHHHHH
T ss_pred CceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccH-hHHHHHH
Confidence 3788888999999999997544422 211 12 3344433 2222222
Q ss_pred HhccCCceeecCchhHHHHHHHHHHhCCCC-ceEEEEeecCCchhHHHHHHHHhcCCceeE--------ee----cC-CC
Q 019402 50 LASKENVEYIAGGATQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKY--------YE----DE-SA 115 (341)
Q Consensus 50 ~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~~--------~~----~~-~~ 115 (341)
.. ..-...+.||.+.-+|..++. + |. +|.+.++.+.. ...+.| ..+|-.-. +. .. +.
T Consensus 107 ~~-~~~~~~~~GGnA~imAn~La~-l--g~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~ 177 (474)
T 3drw_A 107 KT-FRYEEERLGGQAGIIANTLAG-L--KIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGD 177 (474)
T ss_dssp HH-CCCSEEEEESHHHHHHHHHHH-T--TCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTC
T ss_pred Hh-cccceEecCChHHHHHHHHHH-c--CCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCC
Confidence 11 223367899999999999997 3 47 58888876653 334444 22222110 00 00 11
Q ss_pred CcceEE-EEEeCCeec---------------eeecccccc-cCC-cccCCCchhHhhh-hcceEEEEeccccccC-----
Q 019402 116 PTGTCA-VCVVGGERS---------------LVANLSAAN-CYK-SEHLKRPEIWSIV-EKAKYYYIAGFFLTVS----- 171 (341)
Q Consensus 116 ~t~~~~-~~~~~g~~~---------------~~~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~v~i~~~~~~~~----- 171 (341)
+.-.-+ +.+..|++. ++.....+. .+. .+.+. +..+.+ +.+|.++++|+.+...
T Consensus 178 ~~~iH~I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~--~~l~e~~~~~d~~vLSGlq~m~~~y~dg 255 (474)
T 3drw_A 178 PLKINRIFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIK--PFLGEIGKEVDGAIFSGYQGLRTKYSDG 255 (474)
T ss_dssp CCCEEEEEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTG--GGHHHHHHHCSEEEECCGGGCCSBCTTS
T ss_pred CCCcEEEEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHH--HHHHHhhcCCCEEEEecccccccccccc
Confidence 122222 222234432 222222221 111 11111 122333 4799999999985333
Q ss_pred ---H---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 172 ---P---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 172 ---~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
. +...+.++..+..+.++.+++.+....+.....+..+++++|.+-+|++|+..+....+
T Consensus 256 ~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg 321 (474)
T 3drw_A 256 KDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLG 321 (474)
T ss_dssp CBHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhc
Confidence 1 22335556666789999999987665555666777899999999999999999987643
No 68
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.72 E-value=2.7e-08 Score=86.69 Aligned_cols=144 Identities=16% Similarity=0.122 Sum_probs=95.3
Q ss_pred hhcceEEEEeccccccCH-HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC---CCCcEEEcCHHHHHHHHhhc
Q 019402 155 VEKAKYYYIAGFFLTVSP-ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL---PYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~~-~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dil~~n~~E~~~l~~~~ 230 (341)
++++|++++.+ .+.. +...++++.+.+.+.++++|...... +.+ ...++++||..|++.|++..
T Consensus 96 l~~~davviGP---Glg~~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~ 163 (279)
T 3rpz_A 96 EETYRAIAIGP---GLPQTESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVP 163 (279)
T ss_dssp SSCCSEEEECT---TCCCCHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCC
T ss_pred ccCCCEEEECC---CCCCCHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCC
Confidence 46789999975 3332 34566777777788899999865431 222 34689999999999998743
Q ss_pred CCC-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 231 GWE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 231 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
..+ .++..++++++.+ .. ..+|+-.|. +.++++.+..+.+..... ...++.|+||++++.+...+.+|
T Consensus 164 ~~~~~~d~~~aa~~la~------~~-~~~VvlKG~-~~vi~~~~g~~~~~~~g~---~~~at~GtGD~Lag~iaa~lA~g 232 (279)
T 3rpz_A 164 VNELQKKRAEYAKEWAA------QL-QTVIVLKGN-QTVIAFPDGDCWLNPTGN---GALAKGGTGDTLTGMILGMLCCH 232 (279)
T ss_dssp HHHHTTSHHHHHHHHHH------HH-TSEEEECST-TCEEECTTSCEEECCCCC---GGGCSTTHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHH------Hc-CeEEEEeCC-CcEEECCCceEEEeCCCC---CCCCCCChHHHHHHHHHHHHHCC
Confidence 211 2456667777742 11 224555565 455665553333332222 56789999998766666667899
Q ss_pred CCHHHHHHHHHH
Q 019402 310 KPVEDCVRTGCY 321 (341)
Q Consensus 310 ~~~~~a~~~A~~ 321 (341)
.++.+|+..|..
T Consensus 233 ~~~~~A~~~a~~ 244 (279)
T 3rpz_A 233 EDPKHAVLNAVY 244 (279)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999875
No 69
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.46 E-value=4.1e-06 Score=77.51 Aligned_cols=163 Identities=11% Similarity=0.009 Sum_probs=92.7
Q ss_pred ecCchhHHHHHHHHHHhCCCCceEE--EEeecCCchhHHHHHHHHhcCCceeEee------------cCCCCcceEE-EE
Q 019402 59 IAGGATQNSIKVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSTAAGVNVKYYE------------DESAPTGTCA-VC 123 (341)
Q Consensus 59 ~~GG~~~n~a~~l~~l~~lg~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~~~~~t~~~~-~~ 123 (341)
+.||.+..+|..++. +|.++.+ ++.+|. ...+.|...+|..-.+. ....+....+ +.
T Consensus 109 ~~GGnA~imAn~la~---lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 109 RMGGQAGIMANLLGG---VYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEESHHHHHHHHHTT---TTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccCCcHHHHHHHHHH---cCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEE
Confidence 999999998888876 4588877 666554 34555542233330010 0122223333 33
Q ss_pred EeCCeece-eecccccc-----cCCcccCCC-chhHhhhh----cceEEEEeccccccCH---HHHHHHHH---HHHhcC
Q 019402 124 VVGGERSL-VANLSAAN-----CYKSEHLKR-PEIWSIVE----KAKYYYIAGFFLTVSP---ESIQMVAE---HAAAKN 186 (341)
Q Consensus 124 ~~~g~~~~-~~~~~~~~-----~~~~~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~~---~~~~~~~~---~~~~~~ 186 (341)
+.+|++.. +..+.+|+ ......+.. +++.+.+. ++|.+.++|+.+.-.. +.....++ .....+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 34565432 11111111 111112211 22333444 4999999999852221 22222222 346677
Q ss_pred CeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 187 KVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 187 ~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
.++.+++.+....+.....+ .+++++|.+-+|++|+..+....
T Consensus 261 ~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~l 303 (455)
T 1ua4_A 261 IPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEIL 303 (455)
T ss_dssp CCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred ceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHh
Confidence 89999998766555556666 89999999999999999887754
No 70
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.44 E-value=4.5e-06 Score=79.33 Aligned_cols=162 Identities=12% Similarity=0.066 Sum_probs=104.8
Q ss_pred hhHhhhhc-ceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHH
Q 019402 150 EIWSIVEK-AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTF 226 (341)
Q Consensus 150 ~~~~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l 226 (341)
+..+..+. ++.+++..-.+.- .+.+..+++.+++.++++++||-.-.......+...++++ ..++|.+|..|+..|
T Consensus 298 E~~e~~~~~~~alvin~G~l~~-~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 298 EVNDLAAIPHATLLLNTGSVAP-PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHHHTTSTTCEEEEESSCSCC-HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHHHhccCCeEEEeCCCCCH-HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 44556676 8999997654432 6788888888999999999999543222222344567776 789999999999999
Q ss_pred HhhcC-----CC------CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-------------------CeEE
Q 019402 227 AKVHG-----WE------TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-------------------GKVK 276 (341)
Q Consensus 227 ~~~~~-----~~------~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-------------------~~~~ 276 (341)
++... .+ .++..++++.+.+ +....|++| |+. -+++++ +..+
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~------~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~~~~~~~~ 448 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVAF------KYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTSVEDIPCV 448 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHHH------HTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCCTTSSCEE
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHHH------HhCCEEEEc-CCC-eEEECCCccccccccccccccccCCccEE
Confidence 87431 11 1334456666643 122344454 653 344555 4566
Q ss_pred EEecccCCCCcccCCCCcchhhHHHHHHHHhcCC---CHHHHHHHHHHH
Q 019402 277 LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK---PVEDCVRTGCYA 322 (341)
Q Consensus 277 ~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~---~~~~a~~~A~~~ 322 (341)
.++.-.++ -.-.++|.||++.+.+.+.+.++. ++.+|+..|...
T Consensus 449 ~~~~G~~~--~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 449 AVEAGPIE--IMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp EEECSCCG--GGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred EECCCChh--hccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 66533211 223469999999999888888887 577777666543
No 71
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.41 E-value=3.2e-06 Score=72.60 Aligned_cols=159 Identities=14% Similarity=0.040 Sum_probs=94.3
Q ss_pred hhHhhhhcceEEEEecccccc-CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC-CCCcEEEcCHHHHHHHH
Q 019402 150 EIWSIVEKAKYYYIAGFFLTV-SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEARTFA 227 (341)
Q Consensus 150 ~~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~l~ 227 (341)
|..+..+.++.+++.--++.. ..+.+....+.+.+.++|+++||-+-.......+...+++ .+.++|.+|..|...|.
T Consensus 49 E~~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~ 128 (265)
T 3hpd_A 49 ELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp THHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHh
Confidence 345667788889986543311 1245666778888999999999954221111112233332 25899999999999998
Q ss_pred hhcCC----C-----CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 228 KVHGW----E-----TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 228 ~~~~~----~-----~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
+.... + .++..++++.+.+. .+ ..|++| |+ .-++.+++..+.++.-.. -.-..+|.||+.
T Consensus 129 g~~~~~~gvds~~~~~~d~~~~a~~lA~~-----~~-~vVvlk-G~-~d~I~dg~~~~~~~~G~~---~m~~vtGtGc~L 197 (265)
T 3hpd_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAARE-----FN-TTVAVT-GA-VDYVSDGRRTFAVYNGHE---LLGRVTGTGCMV 197 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHH-----TT-SEEEEE-SS-SEEEECSSCEEEECCCCG---GGGGSTTHHHHH
T ss_pred cccCCCCCccCccccHHHHHHHHHHHHHH-----hC-CEEEEe-CC-CeEEEcCCEEEEECCCCh---HhhcCCccchHH
Confidence 75432 1 12344566666421 12 344454 65 456666666666653211 222348999998
Q ss_pred HHHHHHHHhcCCCHHHHHHHHH
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
.|.+.+.+.++ +..+|...|.
T Consensus 198 sg~iaa~lA~~-~~~~Aa~~a~ 218 (265)
T 3hpd_A 198 AALTGAFVAVT-EPLKATTSAL 218 (265)
T ss_dssp HHHHHHHHTTS-CHHHHHHHHH
T ss_pred HHHHHHHHhcC-ChHHHHHHHH
Confidence 77666666777 4445555544
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.28 E-value=2.4e-05 Score=72.36 Aligned_cols=163 Identities=10% Similarity=-0.015 Sum_probs=91.6
Q ss_pred ecCchhHHHHHHHHHHhCCCCceEE--EEeecCCchhHHHHHHHHhcCCceeEeec------------CCCCcceEE-EE
Q 019402 59 IAGGATQNSIKVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSTAAGVNVKYYED------------ESAPTGTCA-VC 123 (341)
Q Consensus 59 ~~GG~~~n~a~~l~~l~~lg~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~~~~~------------~~~~t~~~~-~~ 123 (341)
+.||.+.-+|..++. + |.++.+ ++.+ |+...+.|...+|.+-.+.. .+.+.-.-+ ..
T Consensus 117 ~mGGnAgimAn~la~-l--g~~~vl~~~~~~-----s~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~E 188 (467)
T 1gc5_A 117 RIGGQAGIMANLLGG-V--YRIPTIVHVPQN-----PKLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYE 188 (467)
T ss_dssp EEESHHHHHHHHHHH-T--SCCCEEECCSCC-----CHHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEE
T ss_pred ccCccHHHHHHHHHh-c--CCCEEEEcCCCC-----CHHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEE
Confidence 999999999999887 3 477776 4544 44455555433333211100 012222222 22
Q ss_pred EeCCeece-eecccccccCCc-----ccCCC-chhHhhhh----cceEEEEeccccccC-------H-H---HHHHHHHH
Q 019402 124 VVGGERSL-VANLSAANCYKS-----EHLKR-PEIWSIVE----KAKYYYIAGFFLTVS-------P-E---SIQMVAEH 181 (341)
Q Consensus 124 ~~~g~~~~-~~~~~~~~~~~~-----~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~-------~-~---~~~~~~~~ 181 (341)
+..|.+.. +..+.+|+.+-. ..+.. +++.+.+. ++|.++++|+.+.-. . + .+.+.++.
T Consensus 189 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~ 268 (467)
T 1gc5_A 189 FPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNI 268 (467)
T ss_dssp ECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHH
T ss_pred cCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHh
Confidence 23454421 111222221111 01111 23334444 499999999985222 1 2 22333333
Q ss_pred HHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 182 ~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
....++++.+++.+....+.....+ .+++++|.+-+|++|+..+....
T Consensus 269 l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~l 316 (467)
T 1gc5_A 269 LNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEII 316 (467)
T ss_dssp HHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred hcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHc
Confidence 3557889999998766555566667 89999999999999998666543
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.24 E-value=9.4e-06 Score=74.90 Aligned_cols=74 Identities=14% Similarity=-0.036 Sum_probs=54.3
Q ss_pred hcceEEEEeccccccC---HH---HHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 156 EKAKYYYIAGFFLTVS---PE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~---~~---~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.++|.++++|+.+.-. +. ...+.++.....++++.+++.+....+.....+ .+++++|.+-+|++|+..+...
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 4499999999985333 22 233333444678899999998766555566667 8999999999999999886544
Q ss_pred c
Q 019402 230 H 230 (341)
Q Consensus 230 ~ 230 (341)
.
T Consensus 306 l 306 (457)
T 1l2l_A 306 M 306 (457)
T ss_dssp T
T ss_pred c
Confidence 3
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.49 E-value=0.00048 Score=64.30 Aligned_cols=148 Identities=20% Similarity=0.182 Sum_probs=89.0
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC---
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW--- 232 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~--- 232 (341)
.+.|.+.+.+- +..+...+..++ . .. ++++|-..... . .+.+.++...|+.||..|+..|++..+.
T Consensus 291 ~~~~a~~iGPG-lG~~~~~l~~~l---~-~~-p~VlDADaL~~----~-~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGMG-LENIPKDFNRWL---E-LA-PCVLDAGVFYH----K-EILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECTT-CSSCCTTHHHHH---H-HS-CEEEEGGGGGS----G-GGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcCC-CCCCHHHHHHHH---h-cC-CEEEECcccCC----c-hhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 57888888752 222221133333 2 34 89999754321 1 1223445568999999999999986221
Q ss_pred --C-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 233 --E-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 233 --~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
+ .++..++++++.+. .+..+|++| |.. .+++.++..+..+.- . .-..+.|.||++++.+.+.+++|
T Consensus 360 ~~~~~~d~~~aa~~la~~-----~g~~~VvlK-G~~-~vI~~~~~~~~~~~g-~---~~mat~GtGdvLsg~Iaa~lA~g 428 (475)
T 3k5w_A 360 MLELLDNKLEIARDFSQK-----YPKVVLLLK-GAN-TLIAHQGQVFINILG-S---VALAKAGSGDVLAGLILSLLSQN 428 (475)
T ss_dssp TTSGGGSCC--CHHHHHH-----CTTEEEEEC-SSS-EEEEETTEEEEECCC-C---GGGCSTTHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHH-----cCCeEEEEe-CCC-CEEECCCEEEEECCC-C---CCCCCCCHHHHHHHHHHHHHHcC
Confidence 1 12334555655321 112344454 553 455566666554421 1 44578999999999999999999
Q ss_pred CCHHHHHHHHHHHHhh
Q 019402 310 KPVEDCVRTGCYAANV 325 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~ 325 (341)
.++.+|+..|...-+.
T Consensus 429 ~~~~~Aa~~a~~lhg~ 444 (475)
T 3k5w_A 429 YTPLDAAINASLAHAL 444 (475)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999988877655443
No 75
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=48.31 E-value=21 Score=27.83 Aligned_cols=57 Identities=7% Similarity=0.010 Sum_probs=37.7
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcC
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGN 219 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n 219 (341)
+.|.++|-.+-+.++.+.++++.+++.|..+.+...+.. ..+.+..+++..|.+.++
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l----~~~~~~~l~~~~d~v~is 61 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLA----RKETVDEVMRNCELLLID 61 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCC----CHHHHHHHHHTCSEEEEE
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCC----CHHHHHHHHhhCCEEEEE
Confidence 456677644555677778999999999988888766543 223345555557765543
No 76
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=44.82 E-value=80 Score=22.34 Aligned_cols=66 Identities=20% Similarity=0.110 Sum_probs=42.4
Q ss_pred hHhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeE--EEeCCcHHHHhhhhHHHHhhC-CCCcEEEcCHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF--MMNLSAPFICEFFREPQEKAL-PYMDYVFGNETE 222 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v--~~d~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E 222 (341)
.|+.+..-|++++.. .-+.+-+..+++.++++|..+ +.+-..... .++.-.++- ..+|+-.++..|
T Consensus 71 iwerypqldvvvivt---tddkewikdfieeakergvevfvvynnkdddr---rkeaqqefrsdgvdvrtvsdke 139 (162)
T 2l82_A 71 IWERYPQLDVVVIVT---TDDKEWIKDFIEEAKERGVEVFVVYNNKDDDR---RKEAQQEFRSDGVDVRTVSDKE 139 (162)
T ss_dssp HHHHCTTCCEEEEEE---CCCHHHHHHHHHHHHHTTCEEEEEEECSCHHH---HHHHHHHHCCSSCEEEEESSHH
T ss_pred HHHhCCCCcEEEEEe---cCcHHHHHHHHHHHHhcCcEEEEEecCCCchh---HHHHHHHhhhcCceeeecCCHH
Confidence 456667778888764 345678999999999999874 444433322 222233343 368988877654
No 77
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=44.57 E-value=74 Score=26.10 Aligned_cols=51 Identities=16% Similarity=0.125 Sum_probs=39.9
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEE
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 217 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~ 217 (341)
..+|.+.++|. .....+.+.++++..|+...|+++.++.+. .+.+.+|.++
T Consensus 30 ~GtD~i~vGGs-~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~----------~v~~gaD~~l 80 (228)
T 3vzx_A 30 SGTDAVIIGGS-DGVTEDNVLRMMSKVRRFLVPCVLEVSAIE----------AIVPGFDLYF 80 (228)
T ss_dssp SSCSEEEECCC-SCCCHHHHHHHHHHHTTSSSCEEEECSCGG----------GCCSCCSEEE
T ss_pred cCCCEEEECCc-CCCCHHHHHHHHHHhhccCCCEEEeCCCHH----------HccccCCEEE
Confidence 45799999984 456788999999999998899999887642 3456777765
No 78
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=40.44 E-value=28 Score=24.81 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=27.2
Q ss_pred ccCCCCcchhhHHHHHHHHhcC-CCHHHHHHHH
Q 019402 288 LVDTNGAGDAFVGGFLSQLVQE-KPVEDCVRTG 319 (341)
Q Consensus 288 vvdttGAGDaf~a~~~~~l~~g-~~~~~a~~~A 319 (341)
-.|-.|-||..-|-+.|+|+.| .+.++|++.-
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~is~eEaveil 95 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLISEREAVEII 95 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3577899999999999999998 4788888753
No 79
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=40.27 E-value=1.5e+02 Score=24.29 Aligned_cols=62 Identities=11% Similarity=-0.069 Sum_probs=39.5
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEE
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 217 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~ 217 (341)
+.+.+.|+|.++-...- . + +.++++.+...+++|++--........--+...++++.+|.+.
T Consensus 86 ~~~~~~dvViIDEaQF~-~-~-v~el~~~l~~~gi~VI~~GL~~DF~~~~F~~~~~Ll~~AD~Vt 147 (234)
T 2orv_A 86 QEALGVAVIGIDEGQFF-P-D-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVV 147 (234)
T ss_dssp HHHTTCSEEEESSGGGC-T-T-HHHHHHHHHHTTCEEEEECCSBCTTSSBCTTGGGGGGGCSEEE
T ss_pred HHhccCCEEEEEchhhh-h-h-HHHHHHHHHhCCCEEEEEecccccccCCcccHHHHHHhcccEE
Confidence 44567899999865432 2 3 8888888888999877643321111111123567888888887
No 80
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=32.95 E-value=68 Score=23.34 Aligned_cols=78 Identities=9% Similarity=0.112 Sum_probs=53.6
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCC
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 236 (341)
.++++...|+ ++.+.+..+.+.++.+++.+..|+.... +.-+..+.+.++.+...++...++ +...-+
T Consensus 26 ~~~iI~t~Gs---i~~~~l~~I~~~~~~r~VIi~TD~D~~G--ekIRk~i~~~lp~~~hafi~r~~~-------gVE~a~ 93 (119)
T 2fcj_A 26 PVVIVCTNGT---ISDARLEELADELEGYDVYLLADADEAG--EKLRRQFRRMFPEAEHLYIDRAYR-------EVAAAP 93 (119)
T ss_dssp CCEEEECCSC---CCHHHHHHHHHHTTTSEEEEECCSSHHH--HHHHHHHHHHCTTSEEECCCTTTC-------STTTSC
T ss_pred CCCEEEeCCc---cCHHHHHHHHHHhcCCCEEEEECCCccH--HHHHHHHHHHCCCCcEEeccCCcc-------CcccCC
Confidence 5788888774 6777888888887777777777875332 223445778899998888888763 333455
Q ss_pred HHHHHHHHhc
Q 019402 237 VEEIALKISQ 246 (341)
Q Consensus 237 ~~~~~~~l~~ 246 (341)
.+...+.|.+
T Consensus 94 ~~~I~~aL~~ 103 (119)
T 2fcj_A 94 IWHLAQVLLR 103 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666666654
No 81
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=29.99 E-value=1.4e+02 Score=24.34 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=32.4
Q ss_pred ceEEEEeccccccCHHHHHHHHH---HHHhcCCeE--EEeCCcHHHHhhhhHHHHhhCC--CCcEEE
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAE---HAAAKNKVF--MMNLSAPFICEFFREPQEKALP--YMDYVF 217 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~---~~~~~~~~v--~~d~~~~~~~~~~~~~~~~~l~--~~dil~ 217 (341)
+|++.+-..... +.....++ .+++.|.++ .+++..+. +.+.++++ .+|++.
T Consensus 86 Ad~itvH~ea~~---~~~~~~i~~~~~i~~~G~k~gvalnp~tp~------~~~~~~l~~g~~D~Vl 143 (227)
T 1tqx_A 86 SNQLTFHFEALN---EDTERCIQLAKEIRDNNLWCGISIKPKTDV------QKLVPILDTNLINTVL 143 (227)
T ss_dssp SSEEEEEGGGGT---TCHHHHHHHHHHHHTTTCEEEEEECTTSCG------GGGHHHHTTTCCSEEE
T ss_pred CCEEEEeecCCc---cCHHHHHHHHHHHHHcCCeEEEEeCCCCcH------HHHHHHhhcCCcCEEE
Confidence 888877654321 13445555 999999885 44554432 34667778 799984
No 82
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=29.10 E-value=87 Score=26.09 Aligned_cols=62 Identities=15% Similarity=0.054 Sum_probs=46.9
Q ss_pred hhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHH
Q 019402 154 IVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEAR 224 (341)
Q Consensus 154 ~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~ 224 (341)
....+|++.+... ..+++.+.++++.+++.|..+.++..... + +...+. .+|++-+|..++.
T Consensus 120 ~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~~e------E-~~~A~~l~g~~iIGinnr~l~ 183 (251)
T 1i4n_A 120 SSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHSRE------D-LEKVFSVIRPKIIGINTRDLD 183 (251)
T ss_dssp HHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECSHH------H-HHHHHTTCCCSEEEEECBCTT
T ss_pred HHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCCHH------H-HHHHHhcCCCCEEEEeCcccc
Confidence 3467899999765 34678999999999999999999998654 2 444333 6899988876643
No 83
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=27.80 E-value=2e+02 Score=25.12 Aligned_cols=92 Identities=13% Similarity=0.198 Sum_probs=51.3
Q ss_pred CceEEEEeecCCchhHHHHHHHHhcCCc---eeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhh
Q 019402 79 GATSYIGCIGKDKFGEEMKKNSTAAGVN---VKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 79 ~~v~li~~vG~D~~g~~i~~~l~~~gi~---~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (341)
.++.++|.-| +-|..+.+.|.++... +..+ .+....+..+. + .|.. +..+.+.. +.+
T Consensus 2 ~~VaIvGatG--~vG~el~~lL~~h~fp~~el~~~-~s~~~aG~~~~-~-~~~~-----------~~~~~~~~----~~~ 61 (344)
T 3tz6_A 2 LSIGIVGATG--QVGQVMRTLLDERDFPASAVRFF-ASARSQGRKLA-F-RGQE-----------IEVEDAET----ADP 61 (344)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTCCEEEEEEE-ECTTTSSCEEE-E-TTEE-----------EEEEETTT----SCC
T ss_pred CEEEEECCCC--hHHHHHHHHHHhCCCCceEEEEE-ECcccCCCcee-e-cCCc-----------eEEEeCCH----HHh
Confidence 4555555544 6799999999987533 3333 23334444433 1 2211 11111111 224
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcH
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP 196 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~ 196 (341)
.++|+++++ .+.....+....+.+.|++ ++|.++.
T Consensus 62 ~~~Dvvf~a-----~~~~~s~~~a~~~~~~G~~-vID~Sa~ 96 (344)
T 3tz6_A 62 SGLDIALFS-----AGSAMSKVQAPRFAAAGVT-VIDNSSA 96 (344)
T ss_dssp TTCSEEEEC-----SCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred ccCCEEEEC-----CChHHHHHHHHHHHhCCCE-EEECCCc
Confidence 578998885 3556667777777788885 5666654
No 84
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=27.11 E-value=1.8e+02 Score=25.86 Aligned_cols=38 Identities=8% Similarity=0.190 Sum_probs=24.8
Q ss_pred cceEEEEecccc-ccCHHHHHHHHHHHHh--cCCeEEEeCC
Q 019402 157 KAKYYYIAGFFL-TVSPESIQMVAEHAAA--KNKVFMMNLS 194 (341)
Q Consensus 157 ~~~~v~i~~~~~-~~~~~~~~~~~~~~~~--~~~~v~~d~~ 194 (341)
+.++|++...+. .....-+.++.+.+++ +|+.+++|-.
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 457787765431 1111236788888888 9999999874
No 85
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=26.68 E-value=1.8e+02 Score=23.53 Aligned_cols=59 Identities=7% Similarity=-0.056 Sum_probs=32.8
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEE
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 217 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~ 217 (341)
+.|+|.++-... ++++.+ +.++.++..+++|++--........--+...++++.+|.+.
T Consensus 101 ~~dvViIDEaQF-~~~~~V-~~l~~l~~~~~~Vi~~Gl~~DF~~~~F~~~~~Ll~~AD~Vt 159 (214)
T 2j9r_A 101 EMDVIAIDEVQF-FDGDIV-EVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVT 159 (214)
T ss_dssp SCCEEEECCGGG-SCTTHH-HHHHHHHHTTCEEEEEECSBCTTSCBCTTHHHHHHHCSEEE
T ss_pred CCCEEEEECccc-CCHHHH-HHHHHHhhCCCEEEEEecccccccCccccHHHHHHhcccEE
Confidence 489999986443 455555 66666566788876632211111000122556667777766
No 86
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=26.57 E-value=89 Score=25.75 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=38.7
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEE
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 217 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~ 217 (341)
..+|.+.+.+. .....+.+.++++.+|+...|+++.++.+. .+.+.+|.++
T Consensus 35 ~GtDaI~vGgs-~gvt~~~~~~~v~~ik~~~~Piil~p~~~~----------~~~~gaD~il 85 (235)
T 3w01_A 35 SQTDAIMIGGT-DDVTEDNVIHLMSKIRRYPLPLVLEISNIE----------SVMPGFDFYF 85 (235)
T ss_dssp SSCSEEEECCS-SCCCHHHHHHHHHHHTTSCSCEEEECCCST----------TCCTTCSEEE
T ss_pred cCCCEEEECCc-CCcCHHHHHHHHHHhcCcCCCEEEecCCHH----------HhhcCCCEEE
Confidence 45799999984 456788899999999998889988887532 3455677665
No 87
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=26.25 E-value=1.5e+02 Score=26.66 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=28.7
Q ss_pred cceEEEEecc-----ccccCHHHHHHHHHHHHh--cCCeEEEeCC
Q 019402 157 KAKYYYIAGF-----FLTVSPESIQMVAEHAAA--KNKVFMMNLS 194 (341)
Q Consensus 157 ~~~~v~i~~~-----~~~~~~~~~~~~~~~~~~--~~~~v~~d~~ 194 (341)
+.++|++... ++......+.++.+.+++ .++.+++|-.
T Consensus 176 ~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 176 SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 5788888762 233345678899999999 8999999864
No 88
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=25.65 E-value=31 Score=29.24 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=33.4
Q ss_pred HhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHH
Q 019402 152 WSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPF 197 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~ 197 (341)
...+.++|+++++|.++ -..++..+++.++.....+.+=|+.+.
T Consensus 181 ~~~lp~~D~viiTgstl--vN~Tl~~lL~~~~~a~~vvl~GPStp~ 224 (270)
T 3l5o_A 181 EFILPECDYVYITCASV--VDKTLPRLLELSRNARRITLVGPGTPL 224 (270)
T ss_dssp HHHGGGCSEEEEETHHH--HHTCHHHHHHHTTTSSEEEEESTTCCC
T ss_pred HHhhccCCEEEEEeehh--hcCCHHHHHhhCCCCCEEEEECCCchh
Confidence 45789999999999864 125678888888766556677888776
No 89
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=25.63 E-value=1.2e+02 Score=27.09 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=28.3
Q ss_pred cceEEEEec----c-ccccCHHHHHHHHHHHHh--cCCeEEEeCC
Q 019402 157 KAKYYYIAG----F-FLTVSPESIQMVAEHAAA--KNKVFMMNLS 194 (341)
Q Consensus 157 ~~~~v~i~~----~-~~~~~~~~~~~~~~~~~~--~~~~v~~d~~ 194 (341)
+.+++++.. - ++......+.++.+.+++ +++.+++|-.
T Consensus 159 ~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a 203 (409)
T 3jzl_A 159 KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNC 203 (409)
T ss_dssp TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCC
Confidence 467888875 2 234455678889999999 8999999864
No 90
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.65 E-value=77 Score=24.54 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=15.4
Q ss_pred CchhHHHHHHHHhcCCceeEe
Q 019402 90 DKFGEEMKKNSTAAGVNVKYY 110 (341)
Q Consensus 90 D~~g~~i~~~l~~~gi~~~~~ 110 (341)
|.+|.++.+.|++.|+++...
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~ 59 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGY 59 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEE
T ss_pred cchHHHHHHHHHHCCCEEEEE
Confidence 677788888888887776543
No 91
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=23.43 E-value=2.2e+02 Score=23.82 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=41.0
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEE-cC
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF-GN 219 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~-~n 219 (341)
+.+.++|+++-- .+++.....++.+.++|+++++-..+ |.+...+.+.++.+...++. +|
T Consensus 69 ~ll~~~DVVIDf-----T~p~a~~~~~~~al~~G~~vVigTTG--~s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 69 RVCAEADYLIDF-----TLPEGTLVHLDAALRHDVKLVIGTTG--FSEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp HHHHHCSEEEEC-----SCHHHHHHHHHHHHHHTCEEEECCCC--CCHHHHHHHHHHTTTSEEEECSC
T ss_pred HHhcCCCEEEEc-----CCHHHHHHHHHHHHHcCCCEEEECCC--CCHHHHHHHHHHhccCCEEEECC
Confidence 456688987653 25778888889999999998875443 22333445777777777666 66
No 92
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=22.96 E-value=1.1e+02 Score=20.34 Aligned_cols=46 Identities=9% Similarity=0.111 Sum_probs=32.9
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEeec-----CCCCcceEEEEEe
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYED-----ESAPTGTCAVCVV 125 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~-----~~~~t~~~~~~~~ 125 (341)
++.+|+.+..+.--+.+++.+++.|..+..+++ .+.+.+.+++.+.
T Consensus 2 ~~i~v~nLp~~~te~~l~~~F~~~G~~v~~v~i~~d~~t~~~rg~aFV~F~ 52 (91)
T 2lxi_A 2 NIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFS 52 (91)
T ss_dssp CEEEEETCCSSCCHHHHHHHHHHHTCCCSBCCSSSCSSSCCCSSEEEEECS
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhCCEeEEEEEEecCCCCCcCceEEEEec
Confidence 578899999888888999999999955544432 2334566776664
No 93
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=22.37 E-value=88 Score=25.72 Aligned_cols=26 Identities=8% Similarity=-0.164 Sum_probs=21.3
Q ss_pred eecCchhHHHHHHHHHHhCCCCceEEEEe
Q 019402 58 YIAGGATQNSIKVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 58 ~~~GG~~~n~a~~l~~l~~lg~~v~li~~ 86 (341)
.+.|+.|+-.|.++++ .|.+|.+++.
T Consensus 26 ~SSG~mG~aiA~~~~~---~Ga~V~lv~~ 51 (232)
T 2gk4_A 26 HSTGHLGKIITETLLS---AGYEVCLITT 51 (232)
T ss_dssp CCCCHHHHHHHHHHHH---TTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHH---CCCEEEEEeC
Confidence 5678899999999886 4599999975
No 94
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=22.14 E-value=86 Score=25.68 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=36.0
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeE--EEeCCcHHHHhhhhHHHHhhCCCCcEEE
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF--MMNLSAPFICEFFREPQEKALPYMDYVF 217 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v--~~d~~~~~~~~~~~~~~~~~l~~~dil~ 217 (341)
..+|++.+-.... . ..+.+.++.+++.|.++ .++|..+. +.+.++++.+|++.
T Consensus 79 aGAd~itvh~Ea~--~-~~~~~~i~~i~~~G~k~gv~lnp~tp~------~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 79 AGADFITLHPETI--N-GQAFRLIDEIRRHDMKVGLILNPETPV------EAMKYYIHKADKIT 133 (231)
T ss_dssp HTCSEEEECGGGC--T-TTHHHHHHHHHHTTCEEEEEECTTCCG------GGGTTTGGGCSEEE
T ss_pred cCCCEEEECcccC--C-ccHHHHHHHHHHcCCeEEEEEECCCcH------HHHHHHHhcCCEEE
Confidence 3579998865321 2 24678899999999884 45555432 34667777899886
No 95
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.02 E-value=2.2e+02 Score=24.49 Aligned_cols=40 Identities=0% Similarity=-0.044 Sum_probs=26.8
Q ss_pred hhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCC
Q 019402 155 VEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLS 194 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~ 194 (341)
++.-|-|.+-+-+....++.+...++.+++.|..+.+...
T Consensus 14 L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~ 53 (311)
T 1zl0_A 14 QPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRH 53 (311)
T ss_dssp CCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTT
T ss_pred CCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECcc
Confidence 4445555554433344577788889999999988877653
No 96
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=21.69 E-value=3.4e+02 Score=22.70 Aligned_cols=74 Identities=18% Similarity=0.212 Sum_probs=42.8
Q ss_pred EEeec-CCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 84 IGCIG-KDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 84 i~~vG-~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|+.+| -...|..+...|.+.|.++..+.... . . ...+.+.++|+|+
T Consensus 24 I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~--~-----------~--------------------~~~~~~~~aDvVi 70 (298)
T 2pv7_A 24 IVIVGGYGKLGGLFARYLRASGYPISILDRED--W-----------A--------------------VAESILANADVVI 70 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCEEEECTTC--G-----------G--------------------GHHHHHTTCSEEE
T ss_pred EEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc--c-----------c--------------------CHHHHhcCCCEEE
Confidence 55666 66788888888888776554331111 0 0 1224567899999
Q ss_pred EeccccccCHHHHHHHHHHHHhc--CCeEEEeCCc
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAK--NKVFMMNLSA 195 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~--~~~v~~d~~~ 195 (341)
++ .++..+..+++..... .-.++.|.++
T Consensus 71 la-----vp~~~~~~vl~~l~~~l~~~~iv~~~~s 100 (298)
T 2pv7_A 71 VS-----VPINLTLETIERLKPYLTENMLLADLTS 100 (298)
T ss_dssp EC-----SCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred Ee-----CCHHHHHHHHHHHHhhcCCCcEEEECCC
Confidence 85 3454566666665432 1236666654
No 97
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=21.60 E-value=2.6e+02 Score=23.04 Aligned_cols=58 Identities=10% Similarity=0.087 Sum_probs=33.9
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCe---EEEeCCcHHHHhhhhHHHHhhCCCCcEEEcC
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV---FMMNLSAPFICEFFREPQEKALPYMDYVFGN 219 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~---v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n 219 (341)
.++++.. ..+.+.+.++.+.+++.|.. +..|++.+.......+...+-+...|+++-|
T Consensus 31 Ga~Vv~~-----~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 31 DSIVVAV-----ELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91 (254)
T ss_dssp TCEEEEE-----ESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCEEEEE-----ECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4555554 34667777777777776654 4567776554333333344445567777755
No 98
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=21.39 E-value=1.8e+02 Score=19.16 Aligned_cols=36 Identities=19% Similarity=0.063 Sum_probs=26.4
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCC
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLS 194 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~ 194 (341)
.++.++++.. +.+++....+...|...++++.+-.+
T Consensus 26 gkaklViiA~---D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 26 GSVKEVVVAK---DADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp TCEEEEEEET---TSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCeeEEEEeC---CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4577777765 66777778888888888888766554
No 99
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=21.38 E-value=42 Score=28.42 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=32.1
Q ss_pred HhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHH
Q 019402 152 WSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPF 197 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~ 197 (341)
...+..+|++.++|.++ -..++..+++.++.....+.+=|+.+.
T Consensus 181 e~ll~~aD~viiTGsTl--vN~Ti~~lL~~~~~a~~vvl~GPS~p~ 224 (270)
T 2h1q_A 181 EFILPECDYVYITCASV--VDKTLPRLLELSRNARRITLVGPGTPL 224 (270)
T ss_dssp HHHGGGCSEEEEETHHH--HHTCHHHHHHHTTTSSEEEEESTTCCC
T ss_pred HHHhhcCCEEEEEeeee--ecCCHHHHHHhCccCCeEEEEecChhh
Confidence 35689999999999864 234677788888754456777787665
No 100
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=20.89 E-value=2.7e+02 Score=20.91 Aligned_cols=49 Identities=14% Similarity=0.164 Sum_probs=23.1
Q ss_pred ccCHHHHHHHHHHHHh----cCCeEEEeCCcHH-HHhhhhHHHHhhCCCCcEEE
Q 019402 169 TVSPESIQMVAEHAAA----KNKVFMMNLSAPF-ICEFFREPQEKALPYMDYVF 217 (341)
Q Consensus 169 ~~~~~~~~~~~~~~~~----~~~~v~~d~~~~~-~~~~~~~~~~~~l~~~dil~ 217 (341)
...|+.+..+++.+++ ..+.+++.+.... ........+...++.+|.++
T Consensus 44 aHnP~si~a~l~al~~~~~~~riivvf~~g~~s~r~k~~~~~~~~~~~~aD~vi 97 (163)
T 3mvn_A 44 AHHPTAITATIDALRAKVGQQRILAVLEPRSNTMKMGVHKHELATSLQDADSVF 97 (163)
T ss_dssp CCSHHHHHHHHHHHHHHHTTSCEEEEECCC---------CHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEECCCCcchhhHHHHHHHHHHHhcCCEEE
Confidence 4567666666666654 1233566654321 11112233445566787666
Done!