Your job contains 1 sequence.
>019405
MPRTTTLECPGCPPLRALTFDSLGLIKVIEARGEHGGVPKVVERWGDPHSSNCVLAASID
DSQNDPLLAVARKNGLTDILNPLNGDLRVAISNAGDSGAQPEDDGIVGLHLFKRQREESS
SRSRTLLTCTTKGKASMRSIEVTKVSAESSCSTVKSWNVCASGTIAFSKVDISEKFSLFG
GKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVR
LYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKC
SGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAVCS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019405
(341 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2013678 - symbol:AT1G29320 "AT1G29320" species... 1069 3.9e-108 1
ZFIN|ZDB-GENE-060929-1138 - symbol:wdr74 "WD repeat domai... 304 6.8e-30 2
UNIPROTKB|Q58D06 - symbol:WDR74 "WD repeat-containing pro... 285 4.6e-25 1
UNIPROTKB|I3LD53 - symbol:WDR74 "Uncharacterized protein"... 281 1.2e-24 1
UNIPROTKB|E2R2B7 - symbol:WDR74 "Uncharacterized protein"... 279 2.0e-24 1
UNIPROTKB|E9PS41 - symbol:WDR74 "WD repeat-containing pro... 274 6.8e-24 1
UNIPROTKB|Q6RFH5 - symbol:WDR74 "WD repeat-containing pro... 274 6.8e-24 1
MGI|MGI:2147427 - symbol:Wdr74 "WD repeat domain 74" spec... 272 1.1e-23 1
RGD|1582881 - symbol:Wdr74 "WD repeat domain 74" species:... 272 1.1e-23 1
WB|WBGene00011538 - symbol:T06E6.1 species:6239 "Caenorha... 257 1.1e-21 1
DICTYBASE|DDB_G0290555 - symbol:DDB_G0290555 "WD40 repeat... 216 2.6e-16 2
FB|FBgn0033059 - symbol:CG7845 species:7227 "Drosophila m... 139 1.3e-06 1
CGD|CAL0005449 - symbol:NSA1 species:5476 "Candida albica... 94 3.1e-06 2
UNIPROTKB|Q5A2T0 - symbol:NSA1 "Ribosome biogenesis prote... 94 3.1e-06 2
POMBASE|SPBC83.15 - symbol:SPBC83.15 "ribosome biogenesis... 135 3.1e-06 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 121 0.00015 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 123 0.00027 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 115 0.00036 1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 122 0.00043 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 116 0.00066 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 111 0.00089 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 111 0.00094 1
>TAIR|locus:2013678 [details] [associations]
symbol:AT1G29320 "AT1G29320" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0080008 UniGene:At.15796 UniGene:At.40762
eggNOG:NOG329513 KO:K14841 EMBL:BT026364 IPI:IPI00543633
RefSeq:NP_174226.1 ProteinModelPortal:Q0V856 SMR:Q0V856
PaxDb:Q0V856 PRIDE:Q0V856 EnsemblPlants:AT1G29320.1 GeneID:839806
KEGG:ath:AT1G29320 TAIR:At1g29320 HOGENOM:HOG000029898
InParanoid:Q0V856 OMA:SHQVRLY PhylomeDB:Q0V856
ProtClustDB:CLSN2679695 Genevestigator:Q0V856 Uniprot:Q0V856
Length = 468
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 206/340 (60%), Positives = 242/340 (71%)
Query: 1 MPRTTTLECPGCPPLRALTFDSLGLIKVIEARGEHGGVPKVVERWGDPHSSNCVLAASID 60
MPR E GCPP RALTFDSLGLIKV EARG+ G+P VV WG+ ++S VLAASID
Sbjct: 1 MPRVIPPENLGCPPFRALTFDSLGLIKVTEARGQERGIPTVVNTWGEMNASRSVLAASID 60
Query: 61 DSQNDPLLAVARKNGLTDILNPLNGDLRVAISNAGDSGAQPEDDGIVGLHLFKXXXXXXX 120
D +PLLAVARK+G +++NP NGDL + S GD G PED+ I LHLF+
Sbjct: 61 DRLRNPLLAVARKDGNVEVINPCNGDLHFSYSVFGDDGCSPEDNEISALHLFRKKIDDQT 120
Query: 121 XXXXXXXXXXXKGKASMRSIEVTKVSAESSC-STVKSWNVCASGTIAFSKVDISEKFSLF 179
KG S+RS++ S+ ++ K+W C SG I KVD SE FSLF
Sbjct: 121 ERSCTLLTCTKKGDVSLRSVKFPDAHGNSTDDASPKTWKACGSGEILVGKVDGSENFSLF 180
Query: 180 GGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GGK VE N+WDL++C KIW+AK PPKN+LGIFTPTWFTSA FLS DDHRKFV GT HQV
Sbjct: 181 GGKRVEANIWDLEQCTKIWSAKCPPKNNLGIFTPTWFTSATFLSKDDHRKFVTGTKSHQV 240
Query: 240 RLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGK 299
RLYD S QRRPV+SFDFRET I ++AE+PD IY+GN S DLAS DIRTGKLLG F+GK
Sbjct: 241 RLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFLGK 300
Query: 300 CSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
CSGSIRS+ RHP +IASCGLD YLR +D+KTRQL+SAV
Sbjct: 301 CSGSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAV 340
>ZFIN|ZDB-GENE-060929-1138 [details] [associations]
symbol:wdr74 "WD repeat domain 74" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 SMART:SM00320
ZFIN:ZDB-GENE-060929-1138 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:NOG329513 KO:K14841 CTD:54663 HOVERGEN:HBG052672
OrthoDB:EOG43XV3Z HOGENOM:HOG000006658 EMBL:BC124328
IPI:IPI00802428 RefSeq:NP_001070031.1 UniGene:Dr.76164
ProteinModelPortal:Q08C95 STRING:Q08C95 PRIDE:Q08C95 GeneID:558996
KEGG:dre:558996 InParanoid:Q08C95 NextBio:20882731
ArrayExpress:Q08C95 Bgee:Q08C95 Uniprot:Q08C95
Length = 375
Score = 304 (112.1 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 75/195 (38%), Positives = 112/195 (57%)
Query: 144 KVSAESSCSTVKSWNVCASGTIAFSKVDISEKFSLF-GGKGVEVNVWDLDKCEK-IWTAK 201
KV E S TV+ NV I + + S++ + GGK + VWDL+K +K I+TAK
Sbjct: 110 KVWKEGSTDTVEV-NV--GKDICKMRQNQSQRHHVATGGKENPLKVWDLEKPDKPIFTAK 166
Query: 202 PPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSA-QRRPVMSFDFRETP 260
+ L + P W +F++ D K V T H+VR+YD S QRRPV+ DF E P
Sbjct: 167 NVAHDWLEMRVPVWVRDISFIADSD--KIVTCTGHHKVRVYDPSTPQRRPVLEADFGEYP 224
Query: 261 IKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCG 320
+ A++ + +GN G+LA +D+R G + GCF G +G++R + HP+LP++ASCG
Sbjct: 225 LTALSLPASQDAVVVGNTHGELAILDLRKGLVRGCFKG-LAGAVRGLQCHPSLPLVASCG 283
Query: 321 LDSYLRFWDIKTRQL 335
LD +LR ++ R L
Sbjct: 284 LDRFLRVHSLEDRSL 298
Score = 42 (19.8 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 42 VERWGDPHSSNCVLAA 57
V WGDP+ S +L +
Sbjct: 46 VMAWGDPYESELLLGS 61
>UNIPROTKB|Q58D06 [details] [associations]
symbol:WDR74 "WD repeat-containing protein 74" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IEA] [GO:0001825 "blastocyst formation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0016070 GO:GO:0001825 eggNOG:NOG329513
KO:K14841 GeneTree:ENSGT00390000015119 EMBL:BT021738 EMBL:BT021770
EMBL:BT021791 EMBL:BT021906 EMBL:BT025345 EMBL:BT025445
EMBL:BT026287 EMBL:BT029805 EMBL:BC114802 IPI:IPI00704403
RefSeq:NP_001014854.1 UniGene:Bt.4583 ProteinModelPortal:Q58D06
STRING:Q58D06 PRIDE:Q58D06 Ensembl:ENSBTAT00000012489 GeneID:505875
KEGG:bta:505875 CTD:54663 HOVERGEN:HBG052672 InParanoid:Q58D06
OMA:DLEQTQG OrthoDB:EOG43XV3Z NextBio:20867353 ArrayExpress:Q58D06
Uniprot:Q58D06
Length = 385
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 63/154 (40%), Positives = 89/154 (57%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 149 GGKENALKVWDLQGSEEPLFRAKNVRNDWLDLRVPVWDQDIQFLP--ESQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ AV P+ ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLEATYGEYPLTAVTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
G +GS+R + HP+ P++ASCGLD LR I+
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIR 299
>UNIPROTKB|I3LD53 [details] [associations]
symbol:WDR74 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001825 "blastocyst
formation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016070 GO:GO:0001825
KO:K14841 GeneTree:ENSGT00390000015119 CTD:54663 OMA:DLEQTQG
EMBL:FP340373 RefSeq:NP_001230324.1 UniGene:Ssc.6568
Ensembl:ENSSSCT00000027556 GeneID:100627951 KEGG:ssc:100627951
Uniprot:I3LD53
Length = 385
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/154 (40%), Positives = 89/154 (57%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 149 GGKENALKVWDLQGSEEPVFKAKNVRNDWLDLRVPIWDQDIQFLP--ESQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
G +GS+R + HP+ P++ASCGLD LR I+
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGLDRVLRVHRIR 299
>UNIPROTKB|E2R2B7 [details] [associations]
symbol:WDR74 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001825 "blastocyst
formation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016070 GO:GO:0001825
KO:K14841 GeneTree:ENSGT00390000015119 CTD:54663 OMA:DLEQTQG
EMBL:AAEX03011662 RefSeq:XP_540899.2 Ensembl:ENSCAFT00000024618
GeneID:483778 KEGG:cfa:483778 NextBio:20858130 Uniprot:E2R2B7
Length = 383
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 62/154 (40%), Positives = 88/154 (57%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 150 GGKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--ESQKLVTCTGYHQ 207
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 208 VRVYDPASPQRRPVLEVTYGEYPLMAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 267
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
G +GS+R + HP+ P++ASCGLD LR I+
Sbjct: 268 G-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQ 300
>UNIPROTKB|E9PS41 [details] [associations]
symbol:WDR74 "WD repeat-containing protein 74" species:9606
"Homo sapiens" [GO:0001825 "blastocyst formation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016070 "RNA metabolic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AP001160 GO:GO:0016070
GO:GO:0001825 HGNC:HGNC:25529 ChiTaRS:WDR74 IPI:IPI00984341
ProteinModelPortal:E9PS41 SMR:E9PS41 Ensembl:ENST00000525752
ArrayExpress:E9PS41 Bgee:E9PS41 Uniprot:E9PS41
Length = 328
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 61/154 (39%), Positives = 87/154 (56%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + +WDL E+ ++ AK + L + P W FL +K V T HQ
Sbjct: 92 GGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQ 149
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 150 VRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 209
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
G +GS+R + HP+ P++ASCGLD LR I+
Sbjct: 210 G-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQ 242
>UNIPROTKB|Q6RFH5 [details] [associations]
symbol:WDR74 "WD repeat-containing protein 74" species:9606
"Homo sapiens" [GO:0001825 "blastocyst formation" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0016070 GO:GO:0001825 eggNOG:NOG329513 KO:K14841 CTD:54663
HOVERGEN:HBG052672 OMA:DLEQTQG EMBL:AY500828 EMBL:AK001301
EMBL:AK025383 EMBL:AK292330 EMBL:BC006351 IPI:IPI00018192
IPI:IPI00165237 RefSeq:NP_060563.2 UniGene:Hs.654620
ProteinModelPortal:Q6RFH5 SMR:Q6RFH5 IntAct:Q6RFH5
MINT:MINT-1433008 STRING:Q6RFH5 PhosphoSite:Q6RFH5 DMDM:55976441
SWISS-2DPAGE:Q6RFH5 PaxDb:Q6RFH5 PRIDE:Q6RFH5 DNASU:54663
Ensembl:ENST00000278856 Ensembl:ENST00000311713
Ensembl:ENST00000525239 Ensembl:ENST00000529106 GeneID:54663
KEGG:hsa:54663 UCSC:uc001nvl.2 UCSC:uc001nvm.2
GeneCards:GC11M062600 HGNC:HGNC:25529 HPA:HPA037795
neXtProt:NX_Q6RFH5 PharmGKB:PA142670578 HOGENOM:HOG000006658
InParanoid:Q6RFH5 PhylomeDB:Q6RFH5 ChiTaRS:WDR74 GenomeRNAi:54663
NextBio:57206 ArrayExpress:Q6RFH5 Bgee:Q6RFH5 CleanEx:HS_WDR74
Genevestigator:Q6RFH5 GermOnline:ENSG00000133316 Uniprot:Q6RFH5
Length = 385
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 61/154 (39%), Positives = 87/154 (56%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + +WDL E+ ++ AK + L + P W FL +K V T HQ
Sbjct: 149 GGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
G +GS+R + HP+ P++ASCGLD LR I+
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQ 299
>MGI|MGI:2147427 [details] [associations]
symbol:Wdr74 "WD repeat domain 74" species:10090 "Mus
musculus" [GO:0001825 "blastocyst formation" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016070
"RNA metabolic process" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2147427 GO:GO:0005634
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0016070 GO:GO:0001825 eggNOG:NOG329513 KO:K14841
GeneTree:ENSGT00390000015119 CTD:54663 HOVERGEN:HBG052672
OMA:DLEQTQG OrthoDB:EOG43XV3Z HOGENOM:HOG000006658 EMBL:BC019968
EMBL:AK077521 IPI:IPI00122120 RefSeq:NP_598900.1 UniGene:Mm.29627
ProteinModelPortal:Q8VCG3 SMR:Q8VCG3 STRING:Q8VCG3
PhosphoSite:Q8VCG3 PaxDb:Q8VCG3 PRIDE:Q8VCG3
Ensembl:ENSMUST00000049424 GeneID:107071 KEGG:mmu:107071
UCSC:uc008gmm.1 InParanoid:Q8VCG3 NextBio:358564 Bgee:Q8VCG3
CleanEx:MM_WDR74 Genevestigator:Q8VCG3
GermOnline:ENSMUSG00000042729 Uniprot:Q8VCG3
Length = 384
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 61/153 (39%), Positives = 86/153 (56%)
Query: 181 GKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GK + VWDL E+ ++ AK + L + P W FL +K V T HQV
Sbjct: 150 GKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFLP--GSQKLVTCTGYHQV 207
Query: 240 RLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIG 298
R+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D R G+LLGC G
Sbjct: 208 RVYDPVSPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG 267
Query: 299 KCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
+GS+R + HP+ P++ASCGLD LR I+
Sbjct: 268 -LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIR 299
>RGD|1582881 [details] [associations]
symbol:Wdr74 "WD repeat domain 74" species:10116 "Rattus
norvegicus" [GO:0001825 "blastocyst formation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016070 "RNA metabolic
process" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 RGD:1582881
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH473953 KO:K14841
GeneTree:ENSGT00390000015119 CTD:54663 IPI:IPI00870610
RefSeq:NP_001103039.1 UniGene:Rn.14606 Ensembl:ENSRNOT00000066823
GeneID:690229 KEGG:rno:690229 UCSC:RGD:1582881 NextBio:740452
Uniprot:D3ZMQ7
Length = 366
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 61/153 (39%), Positives = 86/153 (56%)
Query: 181 GKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GK + VWDL E+ ++ AK + L + P W FL +K V T HQV
Sbjct: 151 GKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQV 208
Query: 240 RLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIG 298
R+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D R G+LLGC G
Sbjct: 209 RIYDPASPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG 268
Query: 299 KCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
+GS+R + HP+ P++ASCGLD LR I+
Sbjct: 269 -LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIR 300
>WB|WBGene00011538 [details] [associations]
symbol:T06E6.1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0040035 EMBL:Z81117
eggNOG:NOG329513 KO:K14841 GeneTree:ENSGT00390000015119 PIR:T24597
RefSeq:NP_506824.1 ProteinModelPortal:O45757 STRING:O45757
PaxDb:O45757 EnsemblMetazoa:T06E6.1 GeneID:180039
KEGG:cel:CELE_T06E6.1 UCSC:T06E6.1 CTD:180039 WormBase:T06E6.1
HOGENOM:HOG000017817 InParanoid:O45757 OMA:ATKLHEM NextBio:907848
Uniprot:O45757
Length = 431
Score = 257 (95.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/161 (36%), Positives = 87/161 (54%)
Query: 180 GGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GG + W+L+ ++ W+AK P + LG+ P T A F I + T H++
Sbjct: 136 GGMKNLLKTWNLETGQQTWSAKNVPPDMLGLEIPIMITDARF--IPGQNTILEATKLHEM 193
Query: 240 RLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGC-FIG 298
RLYD AQRRPV F E PI + + I N G++ D+R+ C F G
Sbjct: 194 RLYDPRAQRRPVKKIPFMENPIMCTSLTYKTNQILAANSIGEMGLFDLRSKVHPMCKFKG 253
Query: 299 KCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
+ +GSIRSI HPTLP+ AS G+D +LR D+++R+L+ +
Sbjct: 254 Q-AGSIRSITAHPTLPLAASVGIDRFLRVHDLQSRKLIHKI 293
>DICTYBASE|DDB_G0290555 [details] [associations]
symbol:DDB_G0290555 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0290555 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:AAFI02000164 eggNOG:NOG329513 KO:K14841 RefSeq:XP_635648.1
ProteinModelPortal:Q54FW9 EnsemblProtists:DDB0304570 GeneID:8627720
KEGG:ddi:DDB_G0290555 InParanoid:Q54FW9 OMA:KIYNIHK Uniprot:Q54FW9
Length = 508
Score = 216 (81.1 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 56/188 (29%), Positives = 103/188 (54%)
Query: 156 SWNVCASGTIAFSKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTW 215
S NV A+ F+ ++KF+ FGGK V + +WDL+K K ++AK + L + P
Sbjct: 157 SLNV-ATNLSGFAMNPSNDKFA-FGGKDVNLTIWDLEKQVKTYSAKFK-HDFLNLQEPVS 213
Query: 216 FTSAAFLSIDDHRKFVAGTNDHQVRLYD--TSAQRRPVMSFDFRETPIKAV--AEEPDSF 271
+++ DD K + G+ D +++ YD + R + F + PI+++ + + +
Sbjct: 214 INVVKYMN-DD--KILIGS-DFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQYTNQKEHY 269
Query: 272 NIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIK 331
Y + G + D+RT + +G F +GS++ IA HPTLP++A+ GLD +LR +++
Sbjct: 270 -FYASDSIGKVFCYDVRTSRQVGSFKDS-AGSVKDIAIHPTLPLLATVGLDRHLRVYNLD 327
Query: 332 TRQLLSAV 339
R++L +
Sbjct: 328 NRKMLHKI 335
Score = 43 (20.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 58 SIDDSQNDPLLAVARKNGLTDI 79
+I ND LL VA +NGL D+
Sbjct: 83 AIHPLNNDKLL-VALENGLVDV 103
>FB|FBgn0033059 [details] [associations]
symbol:CG7845 species:7227 "Drosophila melanogaster"
[GO:0046716 "muscle cell homeostasis" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0046716 eggNOG:NOG329513 KO:K14841
GeneTree:ENSGT00390000015119 EMBL:AY052020 RefSeq:NP_001188867.1
RefSeq:NP_610200.1 UniGene:Dm.4409 SMR:Q7K4B2 IntAct:Q7K4B2
STRING:Q7K4B2 EnsemblMetazoa:FBtr0086023 EnsemblMetazoa:FBtr0302508
GeneID:35536 KEGG:dme:Dmel_CG7845 UCSC:CG7845-RA
FlyBase:FBgn0033059 InParanoid:Q7K4B2 OMA:ASEEHGM OrthoDB:EOG4KPRSV
GenomeRNAi:35536 NextBio:793905 Uniprot:Q7K4B2
Length = 419
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/161 (31%), Positives = 71/161 (44%)
Query: 180 GGKGVEVN--VWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTND 236
GGK + N V+DL+ K I+T+K P + L + P W + F +D +
Sbjct: 158 GGKERQNNLKVYDLNADGKQIFTSKNLPNDYLQLEVPVWDSDIGF--VDGPSVLATCSRT 215
Query: 237 HQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKL-LGC 295
VR+YDT QRRPV F E + IY G G L + D R K +
Sbjct: 216 GYVRIYDTRKQRRPVACFASEEHGMSFTTLVAKGNFIYTGTTMGALKAFDTRRMKTHVHT 275
Query: 296 FIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLL 336
+ G +G I + T ++S LD Y+R D +T LL
Sbjct: 276 YKG-FTGGISDLHLDATGRFLSSASLDRYVRIHDSETTVLL 315
>CGD|CAL0005449 [details] [associations]
symbol:NSA1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR015943 CGD:CAL0005449
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006364
EMBL:AACQ01000076 EMBL:AACQ01000075 RefSeq:XP_715968.1
RefSeq:XP_716026.1 GeneID:3642313 GeneID:3642381
KEGG:cal:CaO19.2185 KEGG:cal:CaO19.9731 eggNOG:NOG329513 KO:K14841
Uniprot:Q5A2T0
Length = 406
Score = 94 (38.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 193 KCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVM 252
K + I+ AK + L + P W T+ F K V T Q+RLYDT+ R+P
Sbjct: 192 KPQIIFKAKNVRNDHLELRVPIWITNILFAKAAKGYKLVTSTRYGQIRLYDTAEGRKPRK 251
Query: 253 SFDFRETPI 261
+ E PI
Sbjct: 252 DYKVTEKPI 260
Score = 85 (35.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 291 KLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
KLLG F G +G+ + H I+A GLD YLR +D+++R++L+ V
Sbjct: 311 KLLGKFTGGNTGATFGV--HAYERIVAFAGLDRYLRVFDLESREILAKV 357
>UNIPROTKB|Q5A2T0 [details] [associations]
symbol:NSA1 "Ribosome biogenesis protein NSA1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR015943 CGD:CAL0005449 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0006364 EMBL:AACQ01000076 EMBL:AACQ01000075
RefSeq:XP_715968.1 RefSeq:XP_716026.1 GeneID:3642313 GeneID:3642381
KEGG:cal:CaO19.2185 KEGG:cal:CaO19.9731 eggNOG:NOG329513 KO:K14841
Uniprot:Q5A2T0
Length = 406
Score = 94 (38.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 193 KCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVM 252
K + I+ AK + L + P W T+ F K V T Q+RLYDT+ R+P
Sbjct: 192 KPQIIFKAKNVRNDHLELRVPIWITNILFAKAAKGYKLVTSTRYGQIRLYDTAEGRKPRK 251
Query: 253 SFDFRETPI 261
+ E PI
Sbjct: 252 DYKVTEKPI 260
Score = 85 (35.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 291 KLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSAV 339
KLLG F G +G+ + H I+A GLD YLR +D+++R++L+ V
Sbjct: 311 KLLGKFTGGNTGATFGV--HAYERIVAFAGLDRYLRVFDLESREILAKV 357
>POMBASE|SPBC83.15 [details] [associations]
symbol:SPBC83.15 "ribosome biogenesis protein Nsa1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 PomBase:SPBC83.15 GO:GO:0005634 GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
eggNOG:NOG329513 KO:K14841 PIR:T40704 RefSeq:NP_595647.1
ProteinModelPortal:O94698 EnsemblFungi:SPBC83.15.1 GeneID:2541163
KEGG:spo:SPBC83.15 OrthoDB:EOG432476 NextBio:20802276
Uniprot:O94698
Length = 387
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 46/167 (27%), Positives = 71/167 (42%)
Query: 185 EVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFL----------SIDDHR---KFV 231
E+ +W + K++ K +SL + W T F S DD F
Sbjct: 167 ELELWRTENVVKVFQGKNVKNDSLNLRVRVWITGIVFTEDIINVIDGKSEDDESLCFHFA 226
Query: 232 AGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGK 291
T+ Q+R YDT RRPV +FD +P+ V P +Y + ++ D K
Sbjct: 227 TITHYGQLRFYDTKHGRRPVSTFDVSTSPLSHVGLLPSIKLLYFADKRAQISIFDHSKKK 286
Query: 292 LLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQLLSA 338
++G F G G+ SI H ++A GLD +R +D + L +A
Sbjct: 287 VIGRFQG-VKGAPSSI--HCLGNVVAITGLDRNVRIFDADRKPLANA 330
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/116 (25%), Positives = 65/116 (56%)
Query: 222 LSID--DHRKFVAGTNDHQVRLYDTSAQR-RPVMSFDFRETPIKAVAEE-PDSFNIYIGN 277
++ID D+ F+ G+ND ++++D + + + ++ AV++ P F++ +
Sbjct: 145 VAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSV---S 201
Query: 278 GSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
+ D+ +++ + G SG +R+++ HPTL +IA+ G DS ++ WD++TR
Sbjct: 202 EDKTVKCWDLEKNQIIRDYYGHLSG-VRTVSIHPTLDLIATAGRDSVIKLWDMRTR 256
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 52/198 (26%), Positives = 92/198 (46%)
Query: 144 KVSAESSCSTVKSWNVCASGTIAFSKVDISEKFSLFGG--KGVEVNVWDLDKCEKIWTAK 201
KV+ S T ++C + S SE+ + G GV + +WDL++ + +
Sbjct: 39 KVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGV-IKLWDLEESKMVRAFT 97
Query: 202 PPPKNSLGI-FTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETP 260
N + F P F FL+ +G++D +R++DT ++ + ++
Sbjct: 98 GHRSNCSAVEFHP--F--GEFLA--------SGSSDTNLRVWDTR-KKGCIQTYKGHTRG 144
Query: 261 IKAVAEEPDSFNIYIGNGSGDLASV-DIRTGKLLGCFIGKC-SGSIRSIARHPTLPIIAS 318
I + PD + G G ++ V D+ GKLL F KC G IRS+ HP ++A+
Sbjct: 145 ISTIEFSPDGRWVVSG-GLDNVVKVWDLTAGKLLHEF--KCHEGPIRSLDFHPLEFLLAT 201
Query: 319 CGLDSYLRFWDIKTRQLL 336
D ++FWD++T +L+
Sbjct: 202 GSADRTVKFWDLETFELI 219
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 115 (45.5 bits), Expect = 0.00036, P = 0.00036
Identities = 42/168 (25%), Positives = 74/168 (44%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDH 227
VDIS + ++ ++ WDLD ++I + P ++ W + AF D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDA-------W--TLAFSP--DS 118
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
+ GT+ +V ++ + ++ S D R I ++A PD + G G + DI
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEY-SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 288 RTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 178 ATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 122 (48.0 bits), Expect = 0.00043, P = 0.00043
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 254 FDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTL 313
F+ R + K VA P I +G + D R G LL F G G +R IA HPT
Sbjct: 7 FESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGH-DGPVRGIAFHPTQ 65
Query: 314 PIIASCGLDSYLRFWDIKTRQLLSAVC 340
P+ S G D + W+ K+R+LL ++C
Sbjct: 66 PLFVSGGDDYKVNVWNYKSRKLLFSLC 92
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 30/115 (26%), Positives = 63/115 (54%)
Query: 222 LSID-DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSG 280
L+++ D++ F +G D ++++D ++ R + T ++ +A P + Y+ + +
Sbjct: 207 LAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHIST-VRGLAVSPR--HPYLFSCAE 263
Query: 281 D--LASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTR 333
D + D+ T K++ + G SG + ++A HPTL ++ + G D R WD++TR
Sbjct: 264 DKMVKCWDLETNKVIRHYHGHLSG-VYTLALHPTLDVLVTGGRDGVARVWDMRTR 317
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 111 (44.1 bits), Expect = 0.00089, P = 0.00089
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 169 KVDISEKFSLFGGK-GV-EVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDD 226
K+D+ ++SL G + GV V +WDL+ ++I + P ++ W + AF D
Sbjct: 53 KLDL--QWSLEGHQLGVVSVRLWDLENGKQIKSIDAGPVDA-------W--TLAFSP--D 99
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 100 SQYLATGTHVGKVNIFGVESGKKEY-SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 158
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
I TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 159 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 206
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 111 (44.1 bits), Expect = 0.00094, P = 0.00094
Identities = 41/168 (24%), Positives = 74/168 (44%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDH 227
VDIS + ++ ++ WDL+ ++I + P ++ W + AF D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA-------W--TLAFSP--DS 118
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
+ GT+ +V ++ + ++ S D R I ++A PD + G G + DI
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEY-SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 288 RTGKLLGCFIGKCSGSIRSIARHPTLPIIASCGLDSYLRFWDIKTRQL 335
TGKLL G IRS+ P ++ + D Y++ +D++ L
Sbjct: 178 ATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 341 323 0.00086 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 617 (66 KB)
Total size of DFA: 235 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.62u 0.10s 24.72t Elapsed: 00:00:01
Total cpu time: 24.62u 0.10s 24.72t Elapsed: 00:00:01
Start: Sat May 11 14:25:20 2013 End: Sat May 11 14:25:21 2013