Your job contains 1 sequence.
>019408
MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV
LSECYLKREFFDLIDIDSFGSDSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLAS
YGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALP
DNRHYGFISYCNHCGNSQAYSWEELGQMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITK
MLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMS
AVQKEGYVASRSHIASNAIKTNCPMVACIRIAKELQGCQKN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019408
(341 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078431 - symbol:AT3G56330 species:3702 "Arabi... 1207 9.2e-123 1
POMBASE|SPBC25D12.05 - symbol:trm1 "tRNA (guanine-N2-)-me... 239 2.3e-19 1
CGD|CAL0003366 - symbol:TRM1 species:5476 "Candida albica... 186 9.3e-12 1
ZFIN|ZDB-GENE-060810-40 - symbol:trmt1 "tRNA methyltransf... 185 1.7e-11 1
WB|WBGene00006613 - symbol:trm-1 species:6239 "Caenorhabd... 179 5.5e-11 1
UNIPROTKB|F6R277 - symbol:TRMT1 "Uncharacterized protein"... 177 1.4e-10 1
FB|FBgn0032430 - symbol:CG6388 species:7227 "Drosophila m... 119 1.4e-10 2
UNIPROTKB|F1SD98 - symbol:TRMT1 "Uncharacterized protein"... 172 3.6e-10 1
UNIPROTKB|F1MAP8 - symbol:Trmt1 "Protein Trmt1" species:1... 172 4.6e-10 1
MGI|MGI:1289155 - symbol:Trmt1 "tRNA methyltransferase 1"... 171 6.6e-10 1
UNIPROTKB|J9P9R4 - symbol:TRMT1 "Uncharacterized protein"... 170 8.1e-10 1
UNIPROTKB|E2QUE2 - symbol:TRMT1 "Uncharacterized protein"... 170 9.2e-10 1
UNIPROTKB|Q9NXH9 - symbol:TRMT1 "tRNA (guanine(26)-N(2))-... 169 1.1e-09 1
ASPGD|ASPL0000053549 - symbol:trm1 species:162425 "Emeric... 107 4.4e-09 4
DICTYBASE|DDB_G0284575 - symbol:DDB_G0284575 "N(2),N(2)-d... 158 1.7e-08 1
UNIPROTKB|H9KZ98 - symbol:TRMT1L "Uncharacterized protein... 128 4.1e-08 2
TAIR|locus:2074552 - symbol:AT3G02320 species:3702 "Arabi... 154 4.6e-08 1
ZFIN|ZDB-GENE-041014-189 - symbol:trmt1l "tRNA methyltran... 126 3.0e-07 2
SGD|S000002527 - symbol:TRM1 "tRNA methyltransferase" spe... 117 3.6e-07 2
MGI|MGI:1916185 - symbol:Trmt1l "tRNA methyltransferase 1... 112 2.4e-06 2
UNIPROTKB|A5D7S3 - symbol:TRMT1L "TRMT1-like protein" spe... 114 6.1e-06 2
UNIPROTKB|G1K1K3 - symbol:TRMT1L "TRMT1-like protein" spe... 114 6.1e-06 2
UNIPROTKB|I3LG35 - symbol:TRMT1L "Uncharacterized protein... 109 8.3e-06 2
RGD|1307890 - symbol:Trmt1l "tRNA methyltransferase 1 hom... 113 1.5e-05 2
UNIPROTKB|Q496Z9 - symbol:Trmt1l "TRMT1-like protein" spe... 113 1.5e-05 2
UNIPROTKB|I3LM51 - symbol:I3LM51 "Uncharacterized protein... 119 9.1e-05 1
UNIPROTKB|Q7Z2T5 - symbol:TRMT1L "TRMT1-like protein" spe... 124 0.00014 1
>TAIR|locus:2078431 [details] [associations]
symbol:AT3G56330 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0008033 "tRNA processing" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0009536 "plastid" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR002905
Pfam:PF02005 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AL163763 KO:K00555 GO:GO:0004809 eggNOG:COG1867
PANTHER:PTHR10631 IPI:IPI00519270 PIR:T47750 RefSeq:NP_191192.1
UniGene:At.5075 ProteinModelPortal:Q9LYL0 SMR:Q9LYL0 STRING:Q9LYL0
PRIDE:Q9LYL0 EnsemblPlants:AT3G56330.1 GeneID:824800
KEGG:ath:AT3G56330 TAIR:At3g56330 HOGENOM:HOG000233966
InParanoid:Q9LYL0 OMA:CMTATDT PhylomeDB:Q9LYL0
ProtClustDB:CLSN2684175 Genevestigator:Q9LYL0 Uniprot:Q9LYL0
Length = 433
Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
Identities = 225/334 (67%), Positives = 266/334 (79%)
Query: 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV 60
MCGCGIRSLRYL EA+ADFVMAND ND +RRVI NL +ERG+GDE+RWVVTH AN+
Sbjct: 96 MCGCGIRSLRYLVEAEADFVMANDANDDNRRVITDNLSKVERGTGDERRWVVTHMLANKA 155
Query: 61 LSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLAS 120
+ E Y+ + R FNA++ GLLYLTSTDGYSSGGHRP NSLA+
Sbjct: 156 MIERYMVADFFDMIDIDSFGSDSSFLRDAFNALRLGGLLYLTSTDGYSSGGHRPYNSLAA 215
Query: 121 YGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALP 180
YGA+I PMP+ NEIGLRMLIGGAVREA+ GYHV+PLFSYYSYHGPVFRVMLRVHR L
Sbjct: 216 YGAFIRPMPFGNEIGLRMLIGGAVREAALLGYHVTPLFSYYSYHGPVFRVMLRVHRGKLH 275
Query: 181 DNRHYGFISYCNHCGNSQAYSWEELGQMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITK 240
++R+YGF+++CN CG+S ++ELG M CPCS+T SSSLVVSGP+W GPLHDA+++T+
Sbjct: 276 EDRNYGFVTHCNLCGHSHTLRFDELGLMGCPCSDTKASSSLVVSGPMWLGPLHDASYVTE 335
Query: 241 MLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMS 300
ML LA++WGWV +GTG DL+KLLS MI+ESDPRLP GY K+DEMASRAKMNSP LK MMS
Sbjct: 336 MLELAKEWGWVSEGTGMDLDKLLSIMIEESDPRLPPGYTKMDEMASRAKMNSPPLKKMMS 395
Query: 301 AVQKEGYVASRSHIASNAIKTNCPMVACIRIAKE 334
A+ KEGY ASRSHI NA+KT+CPM +RIAKE
Sbjct: 396 ALVKEGYAASRSHIIPNALKTDCPMSHFVRIAKE 429
>POMBASE|SPBC25D12.05 [details] [associations]
symbol:trm1 "tRNA (guanine-N2-)-methyltransferase"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004809 "tRNA (guanine-N2-)-methyltransferase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0030488 "tRNA
methylation" evidence=ISO] [GO:0031965 "nuclear membrane"
evidence=ISO] InterPro:IPR002905 Pfam:PF02005 PomBase:SPBC25D12.05
GO:GO:0005739 EMBL:CU329671 GO:GO:0031965 GenomeReviews:CU329671_GR
GO:GO:0003723 KO:K00555 GO:GO:0004809 eggNOG:COG1867
PANTHER:PTHR10631 HOGENOM:HOG000177995 OMA:VAPECEH
TIGRFAMs:TIGR00308 EMBL:AJ224000 PIR:T39993 PIR:T46565
RefSeq:NP_596547.1 ProteinModelPortal:Q9P804 STRING:Q9P804
PRIDE:Q9P804 EnsemblFungi:SPBC25D12.05.1 GeneID:2540604
KEGG:spo:SPBC25D12.05 OrthoDB:EOG425925 NextBio:20801729
Uniprot:Q9P804
Length = 548
Score = 239 (89.2 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 100/346 (28%), Positives = 153/346 (44%)
Query: 5 GIRSLRYLAEA-KADFVMANDGNDAHRRVILGN-LKSIERGSG--DEKRWVVTHF-DANR 59
G+RS+RY E ++AND +L N +K+IE+ + V+ + DAN
Sbjct: 135 GLRSIRYAKELPNVKRILAND--------LLENAVKTIEKNVNYNNVSDIVIPNKGDANA 186
Query: 60 VLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHR-PNNSL 118
V+ ++ + +V +DGLL +T TD G+ P
Sbjct: 187 VM---HMNKFHYDVIDLDPYGSAAPFLDAAVQSVSKDGLLCITCTDSAVLAGNAYPEKCF 243
Query: 119 ASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSY-YSYHGPVFRVMLRVHRK 177
++YG L + +E +R L+ A+ G + PL S ++ FRV +++ K
Sbjct: 244 SNYGGSSLRSNFCHEQAVRHLLYAIAASAAKYGRAIKPLLSLSIDFY---FRVFVQIKAK 300
Query: 178 -ALPDN-RHYGFISYCNHCGNSQAYSWEELGQMS---CP----CSNTIG---SSSLV--- 222
L N + + Y HC +++ + LG+ S P SN G S++
Sbjct: 301 PVLVKNLQSQSLLIY--HCSGCGSFAEQPLGKTSPGRLPGTTKFSNASGPPVSANCEHCG 358
Query: 223 ----VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGY 278
V GPLW GPLHDA + KM +AE GT + +L+ + DE P +PF Y
Sbjct: 359 YVHHVGGPLWGGPLHDAEFLKKMRAIAEDLDPEVYGTKRRILGMLA-LADEELPDVPF-Y 416
Query: 279 IKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
L ++ S + SP +SA+ GY S SH SNAIKTN P
Sbjct: 417 FVLSQICSVLRSQSPPQNIFVSALLNAGYRVSGSHAKSNAIKTNAP 462
>CGD|CAL0003366 [details] [associations]
symbol:TRM1 species:5476 "Candida albicans" [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030488 "tRNA methylation" evidence=IEA]
[GO:0004809 "tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA] InterPro:IPR002905 Pfam:PF02005 PROSITE:PS51626
CGD:CAL0003366 GO:GO:0003723 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K00555 GO:GO:0004809 eggNOG:COG1867 PANTHER:PTHR10631
TIGRFAMs:TIGR00308 RefSeq:XP_717889.1 RefSeq:XP_717955.1
ProteinModelPortal:Q5A863 STRING:Q5A863 GeneID:3640396
GeneID:3640495 KEGG:cal:CaO19.10775 KEGG:cal:CaO19.3265
Uniprot:Q5A863
Length = 556
Score = 186 (70.5 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 87/347 (25%), Positives = 145/347 (41%)
Query: 1 MCGCGIRSLRYLAEA-KADFVMANDG-NDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN 58
+ G+RS RY E +A ++AND +A + + N K++E +K V DA
Sbjct: 109 LAASGLRSCRYGLEIPEAGKIVANDMLAEAVKSI---N-KNVEYNKLTDKV-VANQGDAI 163
Query: 59 RVLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTD-GYSSGGHRPNNS 117
+ + E + ++ DG+L +T TD G +G P
Sbjct: 164 KFMGST---DEKFHIVDLDPYGTAAPFIDSAIQCLEDDGMLLVTCTDAGVLAGSGYPEKC 220
Query: 118 LASYGAYILPMPYSN-----EIGLRMLIGGAVREASAQGYHVSPLFSY-YSYHGPVFRVM 171
A YG Y N E+G+R+++ A+ + P+ S Y+ FRV
Sbjct: 221 FALYGGNNFGNAYVNGESNHEVGIRLILNLIASTAAKYKKTIEPMLSLSIDYY---FRVF 277
Query: 172 LRVHRKALPDNRHYG--FISY-CNHCG----------NSQAYSWEEL-GQMSCPCSNTIG 217
++V + H ++Y CN CG N+ + + +L G +S C
Sbjct: 278 VKVKTSPINVKNHASETMLTYGCNGCGHKIVQPLGMKNNTKFQYPKLQGPISSNCQYC-- 335
Query: 218 SSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFG 277
+S V+GP++ G LH+ I K+L + E T ++ +L+ +E D PF
Sbjct: 336 GTSYNVAGPMYAGNLHNREFIDKVLKINESSDKEIYVTNERIKGMLTLASNELDDA-PF- 393
Query: 278 YIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
+ L+++ S K S++ AV GY S +H N +KTN P
Sbjct: 394 FFNLNQLCSIFKSPPISIEQYTKAVGNLGYKVSLTHAKKNCVKTNLP 440
>ZFIN|ZDB-GENE-060810-40 [details] [associations]
symbol:trmt1 "tRNA methyltransferase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000571
InterPro:IPR002905 Pfam:PF02005 PROSITE:PS50103 PROSITE:PS51626
SMART:SM00356 ZFIN:ZDB-GENE-060810-40 GO:GO:0008270 GO:GO:0003723
KO:K00555 GO:GO:0004809 PANTHER:PTHR10631
GeneTree:ENSGT00530000063646 TIGRFAMs:TIGR00308 CTD:55621
EMBL:CR847925 IPI:IPI00509831 RefSeq:XP_685886.4 UniGene:Dr.78809
Ensembl:ENSDART00000129393 GeneID:553298 KEGG:dre:553298
NextBio:20880064 ArrayExpress:F1QGD9 Bgee:F1QGD9 Uniprot:F1QGD9
Length = 672
Score = 185 (70.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 79/342 (23%), Positives = 138/342 (40%)
Query: 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANR 59
+ G+RS+R+ E + AND + +I N + + + DA+
Sbjct: 203 LAASGLRSVRFALEVPGLKSITANDYSAKAAALIARNAQH----NNVTHILQASQRDASM 258
Query: 60 VLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLA 119
V+ E ++E + AV GLL +T TD G+ +
Sbjct: 259 VMYEARGRKERYDVIDLDPYGSPSPFLDSAVQAVSEGGLLCITCTDMAVMAGNSGETCYS 318
Query: 120 SYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSY-YSYHGPVFRVMLRVHRKA 178
YG+ + Y +E+ LR+++ + A+ ++ PL S ++ VF V ++ +
Sbjct: 319 KYGSVSIKSKYCHEMALRIILHSLDQRAAVYQRYIEPLLSVSVDFYIRVF-VRVKTGQVV 377
Query: 179 LPDNRHYGFISY-CNHCGNSQAYSWEELGQM---------SCPCSNTIGSSSL------V 222
+ ++ + Y C CG A+ + +G+ S +G +
Sbjct: 378 VKNSASKQALVYNCVGCG---AFHLQRMGKRINQGKHMKYSAATGPPVGPNCEHCGQRHQ 434
Query: 223 VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLD 282
+ GP W PLHD + K+L A T +E +LS M+ E +P Y LD
Sbjct: 435 LGGPAWAEPLHDINFVQKVLG-AVSGNPTRFRTSKRIEGMLS-MVTEELQDVPL-YYTLD 491
Query: 283 EMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
++S ++P + SA+ GY S SH NA+KT+ P
Sbjct: 492 HLSSTVHRSTPPMMQFRSALLHAGYRVSFSHACKNAVKTDAP 533
>WB|WBGene00006613 [details] [associations]
symbol:trm-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR002905 Pfam:PF02005 GO:GO:0003723
KO:K00555 GO:GO:0004809 eggNOG:COG1867 PANTHER:PTHR10631
GeneTree:ENSGT00530000063646 EMBL:AF059608 EMBL:Z77136 PIR:T43053
RefSeq:NP_506513.1 UniGene:Cel.2073 ProteinModelPortal:Q23270
SMR:Q23270 STRING:Q23270 PaxDb:Q23270 EnsemblMetazoa:ZC376.5.1
EnsemblMetazoa:ZC376.5.2 GeneID:179920 KEGG:cel:CELE_ZC376.5
UCSC:ZC376.5 CTD:179920 WormBase:ZC376.5 HOGENOM:HOG000177995
InParanoid:Q23270 OMA:VAPECEH NextBio:907404 TIGRFAMs:TIGR00308
Uniprot:Q23270
Length = 526
Score = 179 (68.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 90/342 (26%), Positives = 141/342 (41%)
Query: 5 GIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHF-DANRVLS 62
G+R+LR+ E F+MAND +D I N+K +G E V HF DA +
Sbjct: 102 GLRALRFSKEVPNVGFIMANDFSDNAVASIQENVKL----NGVEDI-VEAHFGDAVMTMM 156
Query: 63 ECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYG 122
E + + V G+L +T TD G+ P Y
Sbjct: 157 EHRGIDKRFHAVDLDPYGTASTFLDSAVQCVADRGILMVTCTDMAVLCGNTPEACYNKYD 216
Query: 123 AYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSY-YSYHGPVF-RVMLRVHRKALP 180
A M +E+GLR+L+ A+ ++ PL S ++ VF RV + A
Sbjct: 217 AVTTRMKCCHEVGLRILLRAIDSAANRYTRYIEPLVSISVDFYVRVFVRVHTGAFQ-AKQ 275
Query: 181 DNRHYGFISYCNHC-------------GNSQA-YSWEELGQ-MSCPCSNTIGSS-SLVVS 224
G + C+ C GN Q+ YS + +S P + I L
Sbjct: 276 SGTKVGTVLVCSGCHSMEPLVLLKRGEGNQQSKYSIPTVRHSISGPGNRCIHCLLPLHQI 335
Query: 225 GPLWTGPLHDATHITKMLNLAEKWGWVGD-GTGTDLEKLLSRMIDESDPRLPFGYIKLDE 283
GP++ P+H +T +L + GT L+ +L+ + +E D L Y + ++
Sbjct: 336 GPIYLAPIHSKPFVTSLLERLKSTPEAERLGTHGRLQGVLTMVNEELDDVL---YYEHNQ 392
Query: 284 MASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPM 325
MA+ K++ P +++ SA+ G+ S SH AIKTN PM
Sbjct: 393 MANVVKVSVPKSQSVRSAILNAGFKVSGSHCNPRAIKTNAPM 434
>UNIPROTKB|F6R277 [details] [associations]
symbol:TRMT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR002905 Pfam:PF02005 PROSITE:PS50103 PROSITE:PS51626
SMART:SM00356 GO:GO:0008270 GO:GO:0003723 KO:K00555 GO:GO:0004809
PANTHER:PTHR10631 GeneTree:ENSGT00530000063646 OMA:VAPECEH
TIGRFAMs:TIGR00308 CTD:55621 EMBL:DAAA02019375 IPI:IPI01017535
RefSeq:NP_001193303.1 UniGene:Bt.21089 ProteinModelPortal:F6R277
Ensembl:ENSBTAT00000025736 GeneID:539613 KEGG:bta:539613
NextBio:20878107 Uniprot:F6R277
Length = 662
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 81/344 (23%), Positives = 136/344 (39%)
Query: 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVV--THFDAN 58
+ G+RS+R+ E + + NDA R + ++++ +E +V + DA
Sbjct: 162 LAASGLRSIRFAREVPG--LRSVVANDASARAVDLMRRNVQL---NEVAHLVQPSQADAR 216
Query: 59 RVLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSL 118
++ + E AV GLL +T TD G+
Sbjct: 217 MLMYQHQKASERFDVIDLDPYGSPASFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCY 276
Query: 119 ASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYS-YHGPVFRVMLRVHRK 177
+ YGA L +E+ LR ++ A+ V PL S + ++ VF + K
Sbjct: 277 SKYGAMALKSRACHEMALRTVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTGQAK 336
Query: 178 ALPDNRHYGFISYCNHCGNSQAYSWEELGQMSCPCSNTIGSSSLV--------------- 222
+ C CG A+ + LG+ S + S+
Sbjct: 337 VKASASKQALVFQCVGCG---AFHLQRLGKASAASGGRLKFSAACGPPVAPECEHCGQRH 393
Query: 223 -VSGPLWTGPLHDATHITKMLN-LAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIK 280
+ GP+W PLHD + ++L ++ G T + +LS +I E P +P Y
Sbjct: 394 QLGGPMWAEPLHDLEFVGRVLEAVSANPGRFH--TAERIRGVLS-VITEELPDVPL-YYT 449
Query: 281 LDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
LD+++S N+PSL + SA+ G+ S SH NA+KT+ P
Sbjct: 450 LDQLSSTIHCNTPSLLQLRSALLHAGFRVSLSHACKNAVKTDAP 493
>FB|FBgn0032430 [details] [associations]
symbol:CG6388 species:7227 "Drosophila melanogaster"
[GO:0006400 "tRNA modification" evidence=ISS] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=ISS] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002905 Pfam:PF02005
EMBL:AE014134 GO:GO:0003723 KO:K00555 GO:GO:0004809 eggNOG:COG1867
PANTHER:PTHR10631 GeneTree:ENSGT00530000063646 TIGRFAMs:TIGR00308
EMBL:AY051836 RefSeq:NP_609566.1 UniGene:Dm.413
ProteinModelPortal:Q9VK89 SMR:Q9VK89 STRING:Q9VK89 PaxDb:Q9VK89
PRIDE:Q9VK89 EnsemblMetazoa:FBtr0080367 GeneID:34656
KEGG:dme:Dmel_CG6388 UCSC:CG6388-RA FlyBase:FBgn0032430
InParanoid:Q9VK89 OMA:YPLRAKY OrthoDB:EOG42Z35H PhylomeDB:Q9VK89
GenomeRNAi:34656 NextBio:789540 Bgee:Q9VK89 GermOnline:CG6388
Uniprot:Q9VK89
Length = 578
Score = 119 (46.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 223 VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLD 282
+ GP+W+ P+H+ + +L ++ GT + +LS M+ E +P Y D
Sbjct: 344 LGGPIWSAPIHNPEFVQDLLTAVQETTLQSLGTQRRIVGVLS-MVQEELQDVPLYYTP-D 401
Query: 283 EMASRAKMNS-PSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
++ K+ P LK SA+ GY S SH + N++KTN P
Sbjct: 402 KLCCVLKLEIVPMLK-FRSAILHAGYRVSYSHASKNSLKTNAP 443
Score = 104 (41.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 54/234 (23%), Positives = 97/234 (41%)
Query: 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV 60
+ G+RS+RY E V ND R+ + ++ + R + E+ +H DA +
Sbjct: 107 LAATGLRSIRYAQEIAG--VRQIVANDLSRQAV-ASINTNIRHNKVEELIEPSHSDAMTL 163
Query: 61 LSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVK---RDGLLYLTSTDGYSSGGHRPNNS 117
+ YL + R + A++ GLL +T+TD G+ P
Sbjct: 164 M---YLSTQPEKRFDAVDLDPYGCPNRFLDGAMQCLVDGGLLLVTATDMAVLAGNAPEAC 220
Query: 118 LASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYSYHGPVFRVMLRVHRK 177
YG+ L M +E+ LR+L+ A+ G ++ PL S + R+ +RV+
Sbjct: 221 YVKYGSVPLRMKCCHEMALRILLHCIESHANRYGKYIEPLLSISADF--YIRIFVRVYVG 278
Query: 178 ALPDNRHYGFISYCNHCGNSQAYSWEELGQMSCPCSNTIGSSSLVVSGPLWTGP 231
S+ C + ++ + LG ++ P + T G+ + G + TGP
Sbjct: 279 QAQCKLSMSKQSWIYQCTGCETFTLQPLG-ITKP-NPTAGNPQQLKFG-IPTGP 329
>UNIPROTKB|F1SD98 [details] [associations]
symbol:TRMT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004809 "tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002905 Pfam:PF02005 PROSITE:PS51626 GO:GO:0003723
GO:GO:0004809 PANTHER:PTHR10631 GeneTree:ENSGT00530000063646
OMA:VAPECEH TIGRFAMs:TIGR00308 EMBL:CU914348
Ensembl:ENSSSCT00000015018 Uniprot:F1SD98
Length = 542
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 67/254 (26%), Positives = 107/254 (42%)
Query: 92 AVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQG 151
AV GLL +T TD G+ + YGA L +E+ LR+++ A+
Sbjct: 222 AVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQ 281
Query: 152 YHVSPLFSYYS-YHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELGQMSC 210
V PL S + ++ VF + K + C CG A+ + LG+ S
Sbjct: 282 RFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCG---AFHLQRLGKASG 338
Query: 211 PCSNTIGSSSLV----------------VSGPLWTGPLHDATHITKMLN-LAEKWGWVGD 253
+ S+ + GP+W PLHD + ++L ++ G
Sbjct: 339 AAGGRVKFSAACGPPVAPECEHCGQRHQLGGPMWAEPLHDLDFVGQVLEAVSANPGRFH- 397
Query: 254 GTGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSH 313
T + +LS +I E P +P Y LD+++S ++PSL + SA+ G+ S SH
Sbjct: 398 -TAERIRGVLS-VITEELPDVPL-YYTLDQLSSTIHCSTPSLLQLRSALLHAGFRVSLSH 454
Query: 314 IASNAIKTNCPMVA 327
NA+KT+ P A
Sbjct: 455 ACKNAVKTDAPSSA 468
>UNIPROTKB|F1MAP8 [details] [associations]
symbol:Trmt1 "Protein Trmt1" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR002905 Pfam:PF00642 Pfam:PF02005 PROSITE:PS50103
PROSITE:PS51626 SMART:SM00356 GO:GO:0008270 GO:GO:0003723
GO:GO:0004809 PANTHER:PTHR10631 GeneTree:ENSGT00530000063646
TIGRFAMs:TIGR00308 OMA:CVERVAN IPI:IPI00371284 PRIDE:F1MAP8
Ensembl:ENSRNOT00000003941 Uniprot:F1MAP8
Length = 625
Score = 172 (65.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 80/340 (23%), Positives = 135/340 (39%)
Query: 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANR 59
+ G+RS+R+ E V+AND + R V L + +++E +G DA
Sbjct: 121 LAASGLRSIRFALEVPGLQSVVANDASA--RAVELMH-RNVEL-NGVAHLVQPNQADARM 176
Query: 60 VLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLA 119
++ + E AV GLL +T TD G+ +
Sbjct: 177 LMYQHQKASERFDVIDLDPYGSPAPFLDAAVQAVSDGGLLCVTCTDMAVLAGNSGETCYS 236
Query: 120 SYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYS-YHGPVFRVMLRVHRKA 178
YGA L +E+ LR+++ A+ ++ PL S + ++ VF + K
Sbjct: 237 KYGAMALKSRACHEMALRIVLHSLDLHANCYQRYIVPLLSISADFYVRVFVRVFTGQAKV 296
Query: 179 LPDNRHYGFISYCNHCGNSQAYSWEELGQ----------MSCPCSNTIG------SSSLV 222
+ C CG A+ + LG+ S C +
Sbjct: 297 KSSASKQALVFQCVGCG---AFYLQRLGKASGDPGGRVKFSAACGPPVSPECEHCGQRHQ 353
Query: 223 VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLD 282
+ GP+W P+HD + ++L A T T ++ +LS ++ E P +P Y LD
Sbjct: 354 LGGPMWAEPIHDLDFVGQVLE-AVTTNPGRFHTSTRIQGVLS-VVTEELPDVPL-YYTLD 410
Query: 283 EMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTN 322
+++S N+P L + SA+ G+ S SH NA+KT+
Sbjct: 411 QLSSTVHCNTPRLLQLRSALLHAGFRVSLSHACKNAVKTD 450
>MGI|MGI:1289155 [details] [associations]
symbol:Trmt1 "tRNA methyltransferase 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004809 "tRNA (guanine-N2-)-methyltransferase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR002905 Pfam:PF00642 Pfam:PF02005 PROSITE:PS50103
SMART:SM00356 MGI:MGI:1289155 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 KO:K00555 GO:GO:0004809 eggNOG:COG1867
PANTHER:PTHR10631 GeneTree:ENSGT00530000063646 HOGENOM:HOG000177995
TIGRFAMs:TIGR00308 CTD:55621 HOVERGEN:HBG000477 EMBL:AK159467
EMBL:AK171002 IPI:IPI00321152 RefSeq:NP_001158031.1
RefSeq:NP_001158032.1 RefSeq:NP_932137.2 UniGene:Mm.275720
ProteinModelPortal:Q3TX08 SMR:Q3TX08 STRING:Q3TX08
PhosphoSite:Q3TX08 PaxDb:Q3TX08 PRIDE:Q3TX08
Ensembl:ENSMUST00000001974 Ensembl:ENSMUST00000109767 GeneID:212528
KEGG:mmu:212528 InParanoid:Q3TX08 OrthoDB:EOG4S1T6W NextBio:373616
Bgee:Q3TX08 Genevestigator:Q3TX08 GermOnline:ENSMUSG00000001909
Uniprot:Q3TX08
Length = 663
Score = 171 (65.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 81/342 (23%), Positives = 137/342 (40%)
Query: 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANR 59
+ G+RS+R+ E V+AND + R V L + +++E +G DA
Sbjct: 159 LAASGLRSIRFALEVPGLQSVVANDASA--RAVELMH-RNVEL-NGVAHLVQPNQADARM 214
Query: 60 VLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLA 119
++ + E AV GLL +T TD G+ +
Sbjct: 215 LMYQHQKAPERFDVIDLDPYGSPAPFLDAAVQAVSDGGLLCVTCTDMAVLAGNSGETCYS 274
Query: 120 SYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYS-YHGPVFRVMLRVHRKA 178
YGA L +E+ LR+++ A+ ++ PL S + ++ VF + K
Sbjct: 275 KYGAMALKSRACHEMALRIVLHSLDLHANCYQRYIVPLLSISADFYIRVFVRVFTGQAKV 334
Query: 179 LPDNRHYGFISYCNHCGNSQAYSWEELGQMSCPCSNTIGSSSLV---------------- 222
+ C CG A+ + LG+ S I S+
Sbjct: 335 KSSASKQALVFQCVGCG---AFYLQRLGKASGDPGGRIKFSAACGPPVTPECEHCGQRHQ 391
Query: 223 VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLD 282
+ GP+W P+HD + ++L+ A T ++ +LS ++ E P +P Y LD
Sbjct: 392 LGGPMWAEPIHDLDFVGRVLD-AVTTNPGRFHTSMRIQGVLS-VVTEELPDVPL-YYTLD 448
Query: 283 EMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
+++S N+P L + SA+ G+ S SH NA+KT+ P
Sbjct: 449 QLSSTIHCNTPRLLQLRSALLHAGFRVSLSHACKNAVKTDAP 490
>UNIPROTKB|J9P9R4 [details] [associations]
symbol:TRMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004809 "tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR002905 Pfam:PF00642 Pfam:PF02005
PROSITE:PS50103 PROSITE:PS51626 SMART:SM00356 GO:GO:0008270
GO:GO:0003723 GO:GO:0004809 PANTHER:PTHR10631
GeneTree:ENSGT00530000063646 TIGRFAMs:TIGR00308 EMBL:AAEX03012394
EMBL:AAEX03012395 Ensembl:ENSCAFT00000046457 Uniprot:J9P9R4
Length = 637
Score = 170 (64.9 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 66/253 (26%), Positives = 104/253 (41%)
Query: 92 AVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQG 151
AV GLL +T TD G+ + YGA L +E+ LR+++ A+
Sbjct: 225 AVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQ 284
Query: 152 YHVSPLFSYYS-YHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELGQMSC 210
V PL S + ++ VF + K + C CG + + LG+ S
Sbjct: 285 RFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGT---FHLQHLGKASG 341
Query: 211 PCSNTIGSSSLV----------------VSGPLWTGPLHDATHITKMLNLAEKWGWVGDG 254
+ S+ + GPLW P+HD + ++L A
Sbjct: 342 AAGGRVKFSAACGPPVAPECEHCGQRHQLGGPLWAEPIHDLDFVGRVLE-AVSTNPGRFH 400
Query: 255 TGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHI 314
T + +LS +I E P +P Y LD+++S ++PSL + SA+ G+ S SH
Sbjct: 401 TSERIRGVLS-VITEELPDVPL-YYTLDQLSSTIHCSTPSLLQLRSALLHAGFQVSLSHA 458
Query: 315 ASNAIKTNCPMVA 327
NA+KT+ P A
Sbjct: 459 CKNAVKTDAPSSA 471
>UNIPROTKB|E2QUE2 [details] [associations]
symbol:TRMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004809 "tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR002905 Pfam:PF00642 Pfam:PF02005
PROSITE:PS50103 PROSITE:PS51626 SMART:SM00356 GO:GO:0008270
GO:GO:0003723 GO:GO:0004809 PANTHER:PTHR10631
GeneTree:ENSGT00530000063646 OMA:VAPECEH TIGRFAMs:TIGR00308
EMBL:AAEX03012394 EMBL:AAEX03012395 Ensembl:ENSCAFT00000027033
Uniprot:E2QUE2
Length = 694
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 66/253 (26%), Positives = 104/253 (41%)
Query: 92 AVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQG 151
AV GLL +T TD G+ + YGA L +E+ LR+++ A+
Sbjct: 282 AVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQ 341
Query: 152 YHVSPLFSYYS-YHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELGQMSC 210
V PL S + ++ VF + K + C CG + + LG+ S
Sbjct: 342 RFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGT---FHLQHLGKASG 398
Query: 211 PCSNTIGSSSLV----------------VSGPLWTGPLHDATHITKMLNLAEKWGWVGDG 254
+ S+ + GPLW P+HD + ++L A
Sbjct: 399 AAGGRVKFSAACGPPVAPECEHCGQRHQLGGPLWAEPIHDLDFVGRVLE-AVSTNPGRFH 457
Query: 255 TGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHI 314
T + +LS +I E P +P Y LD+++S ++PSL + SA+ G+ S SH
Sbjct: 458 TSERIRGVLS-VITEELPDVPL-YYTLDQLSSTIHCSTPSLLQLRSALLHAGFQVSLSHA 515
Query: 315 ASNAIKTNCPMVA 327
NA+KT+ P A
Sbjct: 516 CKNAVKTDAPSSA 528
>UNIPROTKB|Q9NXH9 [details] [associations]
symbol:TRMT1 "tRNA (guanine(26)-N(2))-dimethyltransferase"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004809 "tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR002905 Pfam:PF00642 Pfam:PF02005
PROSITE:PS50103 SMART:SM00356 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 EMBL:AC005546 CleanEx:HS_TRMT1 KO:K00555
GO:GO:0004809 eggNOG:COG1867 PANTHER:PTHR10631 HOGENOM:HOG000177995
OMA:VAPECEH TIGRFAMs:TIGR00308 EMBL:AF196479 EMBL:AK000251
EMBL:BC002492 EMBL:BC018302 EMBL:BC040126 IPI:IPI00020508
IPI:IPI00178861 RefSeq:NP_001129507.1 RefSeq:NP_001136026.1
RefSeq:NP_060192.1 UniGene:Hs.515169 ProteinModelPortal:Q9NXH9
SMR:Q9NXH9 IntAct:Q9NXH9 MINT:MINT-1465402 STRING:Q9NXH9
PhosphoSite:Q9NXH9 DMDM:12643821 PaxDb:Q9NXH9 PRIDE:Q9NXH9
DNASU:55621 Ensembl:ENST00000221504 Ensembl:ENST00000357720
Ensembl:ENST00000437766 GeneID:55621 KEGG:hsa:55621 UCSC:uc002mwj.2
UCSC:uc002mwk.2 CTD:55621 GeneCards:GC19M013215 HGNC:HGNC:25980
HPA:HPA041130 HPA:HPA041380 MIM:611669 neXtProt:NX_Q9NXH9
PharmGKB:PA134867808 HOVERGEN:HBG000477 InParanoid:Q9NXH9
PhylomeDB:Q9NXH9 GenomeRNAi:55621 NextBio:60228 ArrayExpress:Q9NXH9
Bgee:Q9NXH9 Genevestigator:Q9NXH9 GermOnline:ENSG00000104907
Uniprot:Q9NXH9
Length = 659
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 83/347 (23%), Positives = 136/347 (39%)
Query: 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVV-THFDAN 58
+ G+RS+R+ E V+AND + +I N++ D V + DA
Sbjct: 160 LAASGLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQL-----NDVAHLVQPSQADAR 214
Query: 59 RVLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSL 118
++ + E AV GLL +T TD G+
Sbjct: 215 MLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCY 274
Query: 119 ASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYS-YHGPVFRVMLRVHRK 177
+ YGA L +E+ LR+++ A+ V PL S + ++ VF + K
Sbjct: 275 SKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTGQAK 334
Query: 178 ALPDNRHYGFISYCNHCGNSQAYSWEELGQMS-CPCSNTIGSSSL--------------- 221
+ C CG A+ + LG+ S P S++
Sbjct: 335 VKASASKQALVFQCVGCG---AFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRH 391
Query: 222 VVSGPLWTGPLHDATHITKMLN-LAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIK 280
+ GP+W P+HD + ++L ++ G T + +LS +I E P +P Y
Sbjct: 392 QLGGPMWAEPIHDLDFVGRVLEAVSANPGRFH--TSERIRGVLS-VITEELPDVPL-YYT 447
Query: 281 LDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMVA 327
LD+++S N+PSL + SA+ + S SH NA+KT+ P A
Sbjct: 448 LDQLSSTIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASA 494
>ASPGD|ASPL0000053549 [details] [associations]
symbol:trm1 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IDA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR002905 Pfam:PF02005 PROSITE:PS51626 EMBL:BN001308
GO:GO:0003723 EMBL:AACD01000172 KO:K00555 GO:GO:0004809
eggNOG:COG1867 PANTHER:PTHR10631 HOGENOM:HOG000177995
TIGRFAMs:TIGR00308 OrthoDB:EOG425925 RefSeq:XP_682675.1
ProteinModelPortal:Q5AQM4 STRING:Q5AQM4
EnsemblFungi:CADANIAT00001193 GeneID:2867922 KEGG:ani:AN9406.2
OMA:CVERVAN Uniprot:Q5AQM4
Length = 700
Score = 107 (42.7 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 93 VKRDGLLYLTSTDG--YSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQ 150
+K +GLL +T TD ++S G+ P S A YG + +S+E GLR+++ A
Sbjct: 259 IKDEGLLCITCTDAGVWASNGY-PEKSFALYGGVPMKGMHSHEGGLRLILNSVAIAAGKY 317
Query: 151 GYHVSPLFSY-YSYHGPVFRVMLRVHR 176
G + PL S ++ R+ +R+HR
Sbjct: 318 GLAIEPLLSLSIDFYA---RLFVRIHR 341
Score = 71 (30.1 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 223 VSGPLWTGPLHDATHITKMLNL 244
+SGP+W GPLH+ I K+L+L
Sbjct: 409 LSGPMWAGPLHNPHFIQKILDL 430
Score = 67 (28.6 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 264 SRMIDESDPRL----PFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAI 319
+ +I +DP L PF Y L ++ + A++ GY +RSH N +
Sbjct: 486 THIIPRTDPSLRDPHPF-YFSLSSISKVLHTTTVPYYEFCGALRHLGYHCTRSHTKPNTV 544
Query: 320 KTNCPMVACIRIAKE 334
+T+ P I +E
Sbjct: 545 RTDAPWAVIWEIMRE 559
Score = 41 (19.5 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 5 GIRSLRYLAEAK-ADFVMAND 24
G+R+LRY +E V+AND
Sbjct: 165 GLRALRYASEIPFVTRVVAND 185
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 253 DGTGTDLEKLLSRMIDESD 271
D + TD +K L + D SD
Sbjct: 640 DSSSTDAQKRLQQEKDSSD 658
>DICTYBASE|DDB_G0284575 [details] [associations]
symbol:DDB_G0284575 "N(2),N(2)-dimethylguanosine tRNA
methyltransferase" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR002905 Pfam:PF02005
PROSITE:PS50103 PROSITE:PS51626 dictyBase:DDB_G0284575
GO:GO:0008270 GO:GO:0003723 EMBL:AAFI02000066 KO:K00555
GO:GO:0004809 eggNOG:COG1867 PANTHER:PTHR10631 TIGRFAMs:TIGR00308
RefSeq:XP_638511.1 ProteinModelPortal:Q54PG3 STRING:Q54PG3
EnsemblProtists:DDB0186078 GeneID:8624661 KEGG:ddi:DDB_G0284575
InParanoid:Q54PG3 OMA:FGPAVPQ Uniprot:Q54PG3
Length = 604
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 82/343 (23%), Positives = 136/343 (39%)
Query: 1 MCGCGIRSLRYLAEA--KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN 58
+ G+RS+RY E D+++AND + + +K+ E E+R DA
Sbjct: 113 LAATGLRSIRYAKEIGDDLDYILAND---ILQTAVDSIVKNREYNGVPEERIKPNLGDAT 169
Query: 59 RVLSECYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSL 118
V+ E + + AV GLL +T+TD G P
Sbjct: 170 MVMMENRTHSKQYDVVDVDPYGAPTQFLDSAVQAVADGGLLCVTATDTAVLCGSYPEACF 229
Query: 119 ASYGAY-ILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYSYHGPVFRVMLRVHRK 177
Y + + + +E+GLR+L+ + A+ H+ P+ S S V RV +RV+
Sbjct: 230 HKYQSVPVHRAGFCHEMGLRILLHSIEQHANRYKRHIVPILSL-SVDFYV-RVFVRVYSS 287
Query: 178 ALPDNR---HYGFISYCNHCGNSQAYSW---EELG---QMSCPCSNT-IGS------SSL 221
L + I C CG+ +E G + P N +GS
Sbjct: 288 PLEAKKALSKMANIFSCIGCGSFHIQPTGVVKEEGNSIKYKVPLLNKEVGSHCQHCTKQY 347
Query: 222 VVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKL 281
+GP W +H+ + ++ EK T + +L+ +IDE ++ F Y K
Sbjct: 348 QFAGPFWAKRIHNVDFCKQAISFLEK-NPTTFNTSRRMYGVLTSVIDELPDQM-F-YFKS 404
Query: 282 DEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
D +++P + SA+ GY S SH+ + IKT+ P
Sbjct: 405 DHFTHTLHLSTPPTAMIKSAILNGGYKVSSSHVLPS-IKTDAP 446
>UNIPROTKB|H9KZ98 [details] [associations]
symbol:TRMT1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] InterPro:IPR002905 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02005 PROSITE:PS00028 SMART:SM00355
GO:GO:0008270 GO:GO:0003723 GO:GO:0005622 GO:GO:0004809
PANTHER:PTHR10631 OMA:LGPLWSS GeneTree:ENSGT00530000063646
EMBL:AADN02071397 EMBL:AADN02071398 EMBL:AADN02071399
Ensembl:ENSGALT00000008187 Uniprot:H9KZ98
Length = 675
Score = 128 (50.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 45/171 (26%), Positives = 74/171 (43%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F V+ G++ LTSTD S + +L YG I+ Y E+ R +I E
Sbjct: 305 SAFRNVRNLGIVSLTSTDISSLYAKAQHVALRHYGCNIVRTEYYKELAARTVIAAVTSEK 364
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
G+ + + Y V++RV R P + I Y HC + +++ G
Sbjct: 365 MKCGF-LRLMIQYSVCLFFXVLVVIRVLRGPSPADDSAKKIRYLIHCQWCEERIFQKEGN 423
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWG 249
Q+ C C ++ + VV GPLW+G L + + +ML A ++G
Sbjct: 424 MVEENPYQQLPCDCHGSMPGRTAVVLGPLWSGALFNTGFLRRMLFEAVQYG 474
Score = 72 (30.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 290 MNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPM 325
MN P L ++ + + GY SR+H ++TN P+
Sbjct: 567 MNMPKLNKFLNCLSEAGYRVSRTHFDPMGVRTNAPL 602
>TAIR|locus:2074552 [details] [associations]
symbol:AT3G02320 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008033 "tRNA processing"
evidence=IEA;ISS] InterPro:IPR002905 Pfam:PF02005 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC068900 GO:GO:0003723 EMBL:AC009755
KO:K00555 GO:GO:0004809 eggNOG:COG1867 PANTHER:PTHR10631
HOGENOM:HOG000177995 TIGRFAMs:TIGR00308 OMA:YPLRAKY EMBL:AK175413
EMBL:AK175448 IPI:IPI00541973 RefSeq:NP_186881.2 UniGene:At.41153
ProteinModelPortal:Q9SRU7 SMR:Q9SRU7 STRING:Q9SRU7 PaxDb:Q9SRU7
PRIDE:Q9SRU7 EnsemblPlants:AT3G02320.1 GeneID:820451
KEGG:ath:AT3G02320 TAIR:At3g02320 InParanoid:Q9SRU7
PhylomeDB:Q9SRU7 ProtClustDB:CLSN2679995 Genevestigator:Q9SRU7
GermOnline:AT3G02320 Uniprot:Q9SRU7
Length = 589
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 82/339 (24%), Positives = 132/339 (38%)
Query: 5 GIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSE 63
G+R+LRY E + V+A D + A N+K GS + H DA RV
Sbjct: 132 GLRALRYAREIEGIGQVVALDNDLASVEACQRNIKF--NGSVAISKVESHHTDA-RVHML 188
Query: 64 CYLKREXXXXXXXXXXXXXXXXXRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGA 123
+ K + +V GLL T+TD G + YG+
Sbjct: 189 THPKE--FDVVDLDPYGSPSIFLDSAIQSVTDGGLLMCTATDMAVLCGGNGEVCYSKYGS 246
Query: 124 YILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNR 183
Y L Y +E+ LR+L+ A+ ++ P+ S RV +RV+ A
Sbjct: 247 YPLRAKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDF--YVRVFVRVYTSASAMKN 304
Query: 184 HYGFISYCNHCGNSQAYSWEELGQMSCPCSNT------IG----------SSSLVVSGPL 227
+SY C ++ + +G+ S P +N+ IG + GP+
Sbjct: 305 TPLKLSYVYQCIGCDSFHLQPVGR-SLPKNNSVRYLPAIGPVVKQDCNHCGKKYNMGGPI 363
Query: 228 WTGPLHDATHITKMLNLAEKWGWVGDG-TGTDLEKLLSRMIDESDPRLPFGYIKLDEMAS 286
W+ P+HD +T +LN + + D D + + E +P ++ L + +
Sbjct: 364 WSAPMHDPEWVTSILNSVKS---MKDRYPAYDRISAVLTTVSEELLDVPL-FLSLHNLCA 419
Query: 287 RAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPM 325
K SPS SAV Y S +H+ +KT+ PM
Sbjct: 420 TLKCISPSAAMFRSAVINANYRISGTHVNPLGMKTDAPM 458
>ZFIN|ZDB-GENE-041014-189 [details] [associations]
symbol:trmt1l "tRNA methyltransferase 1 homolog (S.
cerevisiae)-like" species:7955 "Danio rerio" [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] InterPro:IPR002905
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF02005 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 ZFIN:ZDB-GENE-041014-189
GO:GO:0008270 GO:GO:0003723 GO:GO:0005622 EMBL:BX957305
GO:GO:0004809 PANTHER:PTHR10631 GeneTree:ENSGT00530000063646
IPI:IPI00506476 Ensembl:ENSDART00000061637 Bgee:F1QUC7
Uniprot:F1QUC7
Length = 691
Score = 126 (49.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 48/189 (25%), Positives = 79/189 (41%)
Query: 90 FNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASA 149
F V+ G++ +TSTD S N +L YG I+ Y E+ RM++ R A+
Sbjct: 362 FRNVRNLGIVSVTSTDTGSLYSKSLNVTLRHYGCQIVRTEYYRELAARMVLASVARAAAR 421
Query: 150 QGYHVSPLFSYYSYHGPVFRV-MLRVHRKALPDNRHYGFISYCNHCGN----SQAYSWEE 204
+ L + H + V +LR +A + + +C C EE
Sbjct: 422 CNKGIEVLLAVALEHFVLVVVRVLRGPTQADESAKKLRQLLHCQWCEERVFLKPGSMVEE 481
Query: 205 --LGQMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKL 262
Q+ C C ++ + V GPLW GPL + + +ML A + D++ L
Sbjct: 482 NLYRQLPCQCHGSMPGKTAVELGPLWGGPLFNTGFLRRMLVAAVQHNM------EDIQPL 535
Query: 263 LSRMIDESD 271
+ +I E+D
Sbjct: 536 VKTLICEAD 544
Score = 66 (28.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 255 TGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHI 314
TG D +L ++ ++ P Y + + R MN P L + + + G+ SR+H
Sbjct: 590 TGDDGGNVLKKVKPDTSLEHPAFYYSIHRHSIRG-MNMPKLNKFLQYLTEAGFRVSRTHF 648
Query: 315 ASNAIKTNCPM 325
++T+ +
Sbjct: 649 DPTGVRTDATL 659
>SGD|S000002527 [details] [associations]
symbol:TRM1 "tRNA methyltransferase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005637 "nuclear
inner membrane" evidence=IEA;IMP;IDA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA;IMP;IDA] [GO:0030488 "tRNA methylation" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0032259
"methylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR002905
Pfam:PF02005 SGD:S000002527 GO:GO:0005739 EMBL:BK006938
GO:GO:0003723 EMBL:Z48758 GO:GO:0005637 RefSeq:NP_010405.3
GeneID:851698 KEGG:sce:YDR120C KO:K00555 GO:GO:0004809
eggNOG:COG1867 PANTHER:PTHR10631 GeneTree:ENSGT00530000063646
HOGENOM:HOG000177995 OMA:VAPECEH TIGRFAMs:TIGR00308
OrthoDB:EOG425925 EMBL:M17193 EMBL:AF086825 EMBL:AF086826
PIR:A28323 RefSeq:NP_010409.3 ProteinModelPortal:P15565 SMR:P15565
DIP:DIP-5202N IntAct:P15565 MINT:MINT-475232 STRING:P15565
PaxDb:P15565 PeptideAtlas:P15565 EnsemblFungi:YDR120C GeneID:851702
KEGG:sce:YDR124W CYGD:YDR120c NextBio:969365 ArrayExpress:P15565
Genevestigator:P15565 GermOnline:YDR120C Uniprot:P15565
Length = 570
Score = 117 (46.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 223 VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGT-GTD--LEKLLSRMIDE-SDPRLPFGY 278
++GP++ GPLH+ I ++L + ++ D T GT +E +LS +E SD PF Y
Sbjct: 379 LAGPMYAGPLHNKEFIEEVLRINKEEHRDQDDTYGTRKRIEGMLSLAKNELSDS--PF-Y 435
Query: 279 IKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCP 324
+ +AS K+ P LK +++ + G+ S +H +++KTN P
Sbjct: 436 FSPNHIASVIKLQVPPLKKVVAGLGSLGFECSLTHAQPSSLKTNAP 481
Score = 73 (30.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 92 AVKRDGLLYLTSTD-GYSSGGHRPNNSLASYG-AYILPMPYSNEIGLRMLIGGAVREASA 149
+++ GL+ +T TD +G P A YG A ++ ++E LR+++ + A+
Sbjct: 228 SIEEGGLMLVTCTDLSVLAGNGYPEKCFALYGGANMVSHESTHESALRLVLNLLKQTAAK 287
Query: 150 QGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELGQMS 209
V PL S S V RV ++V + HC +Y + LG++S
Sbjct: 288 YKKTVEPLLSL-SIDFYV-RVFVKVKTSPIEVKNVMSSTMTTYHCSRCGSYHNQPLGRIS 345
>MGI|MGI:1916185 [details] [associations]
symbol:Trmt1l "tRNA methyltransferase 1 like" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007610 "behavior"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002905 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF02005 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
MGI:MGI:1916185 GO:GO:0046872 GO:GO:0008270 GO:GO:0008344
GO:GO:0003723 GO:GO:0005622 GO:GO:0004809 CTD:81627 eggNOG:COG1867
HOVERGEN:HBG057055 OrthoDB:EOG40S0FG PANTHER:PTHR10631
EMBL:AK004493 EMBL:AK088077 EMBL:AK146088 EMBL:AK148524
EMBL:BC022682 EMBL:BC037478 EMBL:BC110425 EMBL:BC132299
IPI:IPI00459632 IPI:IPI00885379 IPI:IPI00885582 IPI:IPI00885813
RefSeq:NP_081152.2 UniGene:Mm.289373 ProteinModelPortal:A2RSY6
SMR:A2RSY6 PhosphoSite:A2RSY6 PaxDb:A2RSY6 PRIDE:A2RSY6
Ensembl:ENSMUST00000065625 GeneID:98685 KEGG:mmu:98685
UCSC:uc007cyr.1 UCSC:uc007cyt.1 UCSC:uc007cyu.1 UCSC:uc007cyv.2
GeneTree:ENSGT00530000063646 InParanoid:A2RSY6 NextBio:353581
Bgee:A2RSY6 CleanEx:MM_1190005F20RIK Genevestigator:A2RSY6
Uniprot:A2RSY6
Length = 728
Score = 112 (44.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 44/193 (22%), Positives = 83/193 (43%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F V+ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 379 SAFRNVRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 438
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ + LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 439 ARCNKGIEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 496
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML + + G D
Sbjct: 497 MVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRML-----FESIHHGLD-D 550
Query: 259 LEKLLSRMIDESD 271
++ L+ +I ES+
Sbjct: 551 IQPLIKTLIFESE 563
Score = 73 (30.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 268 DESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMV 326
D S PF Y + + + MN P LK + + + G+ SR+H I+T+ P++
Sbjct: 621 DASTAHPPF-YYNIHRHSIKG-MNMPKLKKFLCCLSQAGFRVSRTHFDPMGIRTDAPLM 677
>UNIPROTKB|A5D7S3 [details] [associations]
symbol:TRMT1L "TRMT1-like protein" species:9913 "Bos
taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0004809 "tRNA (guanine-N2-)-methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002905 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF02005 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0046872 GO:GO:0007610 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 GO:GO:0004809 EMBL:BC140663 IPI:IPI00852563
RefSeq:NP_001091590.1 UniGene:Bt.16819 PRIDE:A5D7S3 GeneID:540872
KEGG:bta:540872 CTD:81627 eggNOG:COG1867 HOGENOM:HOG000154681
HOVERGEN:HBG057055 InParanoid:A5D7S3 OrthoDB:EOG40S0FG
NextBio:20878888 PANTHER:PTHR10631 Uniprot:A5D7S3
Length = 737
Score = 114 (45.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F ++ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 390 SAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 449
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ + LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 450 ARCNKGIEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 507
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML+ + G D
Sbjct: 508 MVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLSESLHHGL------DD 561
Query: 259 LEKLLSRMIDESD 271
++ L+ +I ES+
Sbjct: 562 IQTLIKTLIFESE 574
Score = 67 (28.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 255 TGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHI 314
T +L K ++ P PF Y + + + MN P LK + + + G+ SR+H
Sbjct: 619 TTANLVKRQKTDVNTEHP--PF-YYNIHRHSIKG-MNMPKLKKFLCYLSQAGFRVSRTHF 674
Query: 315 ASNAIKTNCPMV 326
++T+ P++
Sbjct: 675 DPMGVRTDAPLM 686
>UNIPROTKB|G1K1K3 [details] [associations]
symbol:TRMT1L "TRMT1-like protein" species:9913 "Bos
taurus" [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002905 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02005 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 GO:GO:0008270 GO:GO:0008344 GO:GO:0003723
GO:GO:0005622 GO:GO:0004809 UniGene:Bt.16819 PANTHER:PTHR10631
OMA:LGPLWSS GeneTree:ENSGT00530000063646 EMBL:DAAA02043606
EMBL:DAAA02043607 EMBL:DAAA02043608 Ensembl:ENSBTAT00000014994
Uniprot:G1K1K3
Length = 737
Score = 114 (45.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F ++ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 390 SAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 449
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ + LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 450 ARCNKGIEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 507
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML+ + G D
Sbjct: 508 MVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLSESLHHGL------DD 561
Query: 259 LEKLLSRMIDESD 271
++ L+ +I ES+
Sbjct: 562 IQTLIKTLIFESE 574
Score = 67 (28.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 255 TGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHI 314
T +L K ++ P PF Y + + + MN P LK + + + G+ SR+H
Sbjct: 619 TTANLVKRQKTDVNTEHP--PF-YYNIHRHSIKG-MNMPKLKKFLCYLSQAGFRVSRTHF 674
Query: 315 ASNAIKTNCPMV 326
++T+ P++
Sbjct: 675 DPMGVRTDAPLM 686
>UNIPROTKB|I3LG35 [details] [associations]
symbol:TRMT1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002905 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02005 PROSITE:PS00028 SMART:SM00355
GO:GO:0008270 GO:GO:0008344 GO:GO:0003723 GO:GO:0005622
GO:GO:0004809 PANTHER:PTHR10631 OMA:LGPLWSS
GeneTree:ENSGT00530000063646 EMBL:CU915492 EMBL:CU972398
Ensembl:ENSSSCT00000029214 Uniprot:I3LG35
Length = 727
Score = 109 (43.4 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 43/193 (22%), Positives = 82/193 (42%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F ++ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 380 SAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 439
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ + LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 440 ARCNKGIEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 497
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML + G D
Sbjct: 498 MVEENPYKQLPCNCYGSMPGKTAIELGPLWSSSLFNTGFLKRMLFESLHHGL------DD 551
Query: 259 LEKLLSRMIDESD 271
++ L+ +I ES+
Sbjct: 552 IQTLIKTLIFESE 564
Score = 71 (30.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 257 TDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIAS 316
T+L K + D S PF Y + + + MN P LK + + + G+ SR+H
Sbjct: 611 TNLAK--KQKTDVSTEHPPF-YYNIHRHSIKG-MNMPKLKKFLCYLSQAGFRVSRTHFDP 666
Query: 317 NAIKTNCPMV 326
++T+ P++
Sbjct: 667 MGVRTDAPLM 676
>RGD|1307890 [details] [associations]
symbol:Trmt1l "tRNA methyltransferase 1 homolog-like"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004809 "tRNA (guanine-N2-)-methyltransferase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA;ISO] [GO:0030534 "adult behavior"
evidence=ISO] InterPro:IPR002905 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02005 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 RGD:1307890 GO:GO:0046872 GO:GO:0008270 GO:GO:0008344
GO:GO:0003723 GO:GO:0005622 GO:GO:0004809 CTD:81627 eggNOG:COG1867
HOGENOM:HOG000154681 HOVERGEN:HBG057055 OrthoDB:EOG40S0FG
PANTHER:PTHR10631 EMBL:BC100650 IPI:IPI00372149
RefSeq:NP_001032269.1 UniGene:Rn.16683 ProteinModelPortal:Q496Z9
PhosphoSite:Q496Z9 PRIDE:Q496Z9 GeneID:304851 KEGG:rno:304851
UCSC:RGD:1307890 InParanoid:Q496Z9 NextBio:653725
Genevestigator:Q496Z9 Uniprot:Q496Z9
Length = 723
Score = 113 (44.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 45/193 (23%), Positives = 83/193 (43%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F V+ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 375 SAFRNVRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 434
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ V LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 435 ARCNKGVEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 492
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML + + G D
Sbjct: 493 MVEENPYKQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRML-----FESIHHGLD-D 546
Query: 259 LEKLLSRMIDESD 271
++ L+ +I ES+
Sbjct: 547 IQPLIKTLIFESE 559
Score = 64 (27.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 268 DESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPM 325
D S PF Y + + + MN P LK + + + G+ SR+H I+T+ +
Sbjct: 617 DASTAHPPF-YYNIHRHSIKG-MNMPKLKKFLCCLSQAGFRVSRTHFDPMGIRTDASL 672
>UNIPROTKB|Q496Z9 [details] [associations]
symbol:Trmt1l "TRMT1-like protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] InterPro:IPR002905 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02005 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 RGD:1307890 GO:GO:0046872 GO:GO:0008270 GO:GO:0008344
GO:GO:0003723 GO:GO:0005622 GO:GO:0004809 CTD:81627 eggNOG:COG1867
HOGENOM:HOG000154681 HOVERGEN:HBG057055 OrthoDB:EOG40S0FG
PANTHER:PTHR10631 EMBL:BC100650 IPI:IPI00372149
RefSeq:NP_001032269.1 UniGene:Rn.16683 ProteinModelPortal:Q496Z9
PhosphoSite:Q496Z9 PRIDE:Q496Z9 GeneID:304851 KEGG:rno:304851
UCSC:RGD:1307890 InParanoid:Q496Z9 NextBio:653725
Genevestigator:Q496Z9 Uniprot:Q496Z9
Length = 723
Score = 113 (44.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 45/193 (23%), Positives = 83/193 (43%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F V+ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 375 SAFRNVRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 434
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ V LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 435 ARCNKGVEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 492
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML + + G D
Sbjct: 493 MVEENPYKQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRML-----FESIHHGLD-D 546
Query: 259 LEKLLSRMIDESD 271
++ L+ +I ES+
Sbjct: 547 IQPLIKTLIFESE 559
Score = 64 (27.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 268 DESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPM 325
D S PF Y + + + MN P LK + + + G+ SR+H I+T+ +
Sbjct: 617 DASTAHPPF-YYNIHRHSIKG-MNMPKLKKFLCCLSQAGFRVSRTHFDPMGIRTDASL 672
>UNIPROTKB|I3LM51 [details] [associations]
symbol:I3LM51 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004809
"tRNA (guanine-N2-)-methyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR002905 Pfam:PF00642 Pfam:PF02005 PROSITE:PS50103
PROSITE:PS51626 SMART:SM00356 GO:GO:0008270 GO:GO:0003723
EMBL:CU463133 GO:GO:0004809 PANTHER:PTHR10631
GeneTree:ENSGT00530000063646 Ensembl:ENSSSCT00000026552 OMA:CFEIRED
Uniprot:I3LM51
Length = 265
Score = 119 (46.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 227 LWTGPLHDATHITKMLN-LAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLDEMA 285
+W PLHD + ++L ++ G T + +LS +I E P +P Y LD+++
Sbjct: 1 MWAEPLHDLDFVGQVLEAVSANPGRFH--TAERIRGVLS-VITEELPDVPL-YYTLDQLS 56
Query: 286 SRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMVA 327
S ++PSL + SA+ G+ S SH NA+KT+ P A
Sbjct: 57 STIHCSTPSLLQLRSALLHAGFRVSLSHACKNAVKTDAPSSA 98
>UNIPROTKB|Q7Z2T5 [details] [associations]
symbol:TRMT1L "TRMT1-like protein" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004809 "tRNA
(guanine-N2-)-methyltransferase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
InterPro:IPR002905 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF02005 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0008344 EMBL:CH471067
GO:GO:0003723 GO:GO:0005622 EMBL:AL109865 GO:GO:0004809 CTD:81627
eggNOG:COG1867 HOGENOM:HOG000154681 HOVERGEN:HBG057055
OrthoDB:EOG40S0FG PANTHER:PTHR10631 EMBL:AF288399 EMBL:AK074936
EMBL:AK074993 EMBL:AK131460 EMBL:AL136133 EMBL:BC039738
EMBL:BC045535 EMBL:AF163261 IPI:IPI00334914 IPI:IPI00844404
RefSeq:NP_001189352.1 RefSeq:NP_112196.3 UniGene:Hs.107149
ProteinModelPortal:Q7Z2T5 SMR:Q7Z2T5 IntAct:Q7Z2T5 STRING:Q7Z2T5
PhosphoSite:Q7Z2T5 DMDM:166988174 PaxDb:Q7Z2T5 PeptideAtlas:Q7Z2T5
PRIDE:Q7Z2T5 Ensembl:ENST00000367504 Ensembl:ENST00000367506
Ensembl:ENST00000458395 GeneID:81627 KEGG:hsa:81627 UCSC:uc001grf.4
GeneCards:GC01M185088 H-InvDB:HIX0001421 HGNC:HGNC:16782
HPA:HPA026728 MIM:611673 neXtProt:NX_Q7Z2T5 PharmGKB:PA25612
InParanoid:Q7Z2T5 OMA:LGPLWSS GenomeRNAi:81627 NextBio:72006
Bgee:Q7Z2T5 CleanEx:HS_C1orf25 Genevestigator:Q7Z2T5 Uniprot:Q7Z2T5
Length = 733
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 55/246 (22%), Positives = 102/246 (41%)
Query: 88 TVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147
+ F ++ G++ +TSTD S + + YG I+ Y E+ R+++ R A
Sbjct: 384 SAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAA 443
Query: 148 SAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALPDNRHYGFISYCNHCGNSQAYSWEELG- 206
+ + LF+ H + V++RV R + I Y HC + +++ G
Sbjct: 444 ARCNKGIEVLFAVALEHFVL--VVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGN 501
Query: 207 --------QMSCPCSNTIGSSSLVVSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTD 258
Q+ C C ++ + + GPLW+ L + + +ML + G D
Sbjct: 502 MVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLFESLHHGL------DD 555
Query: 259 LEKLLSRMIDESD--PRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIAS 316
++ L+ +I ES+ P+ F I ++ + N +KT + Y+A S
Sbjct: 556 IQTLIKTLIFESECTPQSQFS-IHASSNVNKQEENGVFIKTTDDTTT-DNYIAQGKR-KS 612
Query: 317 NAIKTN 322
N + TN
Sbjct: 613 NEMITN 618
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 341 324 0.00086 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 619 (66 KB)
Total size of DFA: 242 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.94u 0.16s 24.10t Elapsed: 00:00:01
Total cpu time: 23.94u 0.16s 24.10t Elapsed: 00:00:01
Start: Sat May 11 14:30:29 2013 End: Sat May 11 14:30:30 2013