Query 019408
Match_columns 341
No_of_seqs 202 out of 1212
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:37:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3axs_A Probable N(2),N(2)-dime 100.0 7.8E-78 2.7E-82 593.2 28.7 315 1-340 60-383 (392)
2 2dul_A N(2),N(2)-dimethylguano 100.0 1.3E-71 4.3E-76 547.3 30.2 306 1-335 55-378 (378)
3 3k6r_A Putative transferase PH 99.6 1.9E-15 6.5E-20 142.3 9.3 93 1-103 133-225 (278)
4 2b78_A Hypothetical protein SM 99.6 1.3E-14 4.3E-19 142.2 13.7 135 1-168 220-368 (385)
5 4dmg_A Putative uncharacterize 99.6 3.4E-14 1.2E-18 139.8 14.3 132 1-169 222-366 (393)
6 3c0k_A UPF0064 protein YCCW; P 99.5 7.6E-14 2.6E-18 136.8 16.1 138 1-169 228-379 (396)
7 2as0_A Hypothetical protein PH 99.5 1.6E-13 5.6E-18 134.4 13.1 137 1-168 225-375 (396)
8 2igt_A SAM dependent methyltra 99.5 3E-13 1E-17 130.1 13.8 124 1-155 161-299 (332)
9 1wxx_A TT1595, hypothetical pr 99.5 5.8E-13 2E-17 130.0 15.0 135 1-168 217-364 (382)
10 2frn_A Hypothetical protein PH 99.4 7.6E-13 2.6E-17 123.7 10.2 139 1-175 133-276 (278)
11 3p9n_A Possible methyltransfer 99.3 1.6E-11 5.6E-16 107.1 12.5 117 1-125 52-178 (189)
12 3v97_A Ribosomal RNA large sub 99.2 3.4E-11 1.2E-15 126.5 12.8 96 1-103 547-657 (703)
13 2oo3_A Protein involved in cat 99.2 1.6E-11 5.4E-16 115.3 6.9 91 1-101 99-196 (283)
14 3a27_A TYW2, uncharacterized p 99.2 9.1E-11 3.1E-15 109.3 11.7 94 1-104 127-220 (272)
15 2ift_A Putative methylase HI07 99.2 4.4E-11 1.5E-15 106.1 7.7 120 1-126 61-188 (201)
16 2yx1_A Hypothetical protein MJ 99.2 4.1E-11 1.4E-15 115.0 8.0 89 1-103 203-291 (336)
17 2fpo_A Methylase YHHF; structu 99.1 1.2E-10 4.1E-15 103.3 8.9 115 1-124 62-184 (202)
18 2fhp_A Methylase, putative; al 99.1 3.4E-10 1.2E-14 97.5 9.7 99 1-104 52-155 (187)
19 2esr_A Methyltransferase; stru 99.1 2.2E-10 7.4E-15 98.5 8.0 116 1-124 39-162 (177)
20 1ws6_A Methyltransferase; stru 99.0 1.3E-09 4.5E-14 92.2 10.8 96 1-104 49-148 (171)
21 3lpm_A Putative methyltransfer 99.0 1.7E-09 5.8E-14 99.3 11.9 94 2-102 58-175 (259)
22 3bt7_A TRNA (uracil-5-)-methyl 99.0 1.4E-09 4.7E-14 105.6 9.9 93 1-103 221-326 (369)
23 3ajd_A Putative methyltransfer 98.9 6.7E-09 2.3E-13 96.5 12.0 98 1-104 91-211 (274)
24 3duw_A OMT, O-methyltransferas 98.9 1.2E-08 4E-13 90.8 12.2 98 2-103 67-167 (223)
25 2qfm_A Spermine synthase; sper 98.9 3.4E-09 1.2E-13 102.9 9.1 101 2-103 197-314 (364)
26 3evz_A Methyltransferase; NYSG 98.9 7.3E-09 2.5E-13 92.5 10.4 134 2-178 64-221 (230)
27 3tr6_A O-methyltransferase; ce 98.9 9.9E-09 3.4E-13 91.3 10.7 98 2-103 73-174 (225)
28 3m4x_A NOL1/NOP2/SUN family pr 98.9 1.1E-08 3.7E-13 102.4 11.8 95 1-104 113-234 (456)
29 3tfw_A Putative O-methyltransf 98.9 1.7E-08 5.8E-13 92.3 11.9 97 2-103 72-170 (248)
30 2avd_A Catechol-O-methyltransf 98.8 1.4E-08 4.8E-13 90.6 10.9 97 2-102 78-178 (229)
31 3dr5_A Putative O-methyltransf 98.8 9.3E-09 3.2E-13 92.8 9.7 95 2-101 65-161 (221)
32 1iy9_A Spermidine synthase; ro 98.8 1.4E-08 4.8E-13 94.8 10.2 96 2-103 84-189 (275)
33 3m6w_A RRNA methylase; rRNA me 98.8 1.7E-08 5.7E-13 101.2 11.1 94 1-104 109-229 (464)
34 1xdz_A Methyltransferase GIDB; 98.8 8.9E-08 3E-12 86.6 14.9 141 2-177 79-219 (240)
35 3dxy_A TRNA (guanine-N(7)-)-me 98.8 3E-08 1E-12 89.3 11.6 98 2-106 43-152 (218)
36 2ozv_A Hypothetical protein AT 98.8 5.8E-09 2E-13 96.2 7.0 98 1-102 44-169 (260)
37 1sui_A Caffeoyl-COA O-methyltr 98.8 3.4E-08 1.2E-12 90.5 11.8 98 2-103 88-190 (247)
38 3e05_A Precorrin-6Y C5,15-meth 98.8 1.6E-08 5.6E-13 88.8 9.2 93 2-103 49-142 (204)
39 3c3y_A Pfomt, O-methyltransfer 98.8 2.8E-08 9.6E-13 90.3 10.4 98 2-103 79-181 (237)
40 3njr_A Precorrin-6Y methylase; 98.8 2.4E-08 8.1E-13 88.7 9.6 91 2-103 64-154 (204)
41 1nv8_A HEMK protein; class I a 98.8 2.3E-08 8E-13 93.7 9.9 92 1-103 131-249 (284)
42 3ntv_A MW1564 protein; rossman 98.7 2E-08 6.9E-13 90.6 8.7 94 2-102 80-175 (232)
43 3r3h_A O-methyltransferase, SA 98.7 5.6E-09 1.9E-13 95.5 5.0 98 2-103 69-170 (242)
44 3g89_A Ribosomal RNA small sub 98.7 9.9E-08 3.4E-12 87.6 13.4 140 2-176 89-228 (249)
45 3u81_A Catechol O-methyltransf 98.7 2.2E-08 7.5E-13 89.4 8.6 96 2-102 67-169 (221)
46 1wy7_A Hypothetical protein PH 98.7 6.7E-08 2.3E-12 84.8 11.3 86 1-103 57-148 (207)
47 2jjq_A Uncharacterized RNA met 98.7 1.6E-08 5.4E-13 100.3 8.1 88 1-103 298-387 (425)
48 1inl_A Spermidine synthase; be 98.7 2.7E-08 9.4E-13 93.7 9.2 96 2-103 99-205 (296)
49 3cbg_A O-methyltransferase; cy 98.7 5E-08 1.7E-12 88.1 10.4 98 2-103 81-182 (232)
50 3eey_A Putative rRNA methylase 98.7 7.4E-08 2.5E-12 83.9 11.1 95 2-103 31-139 (197)
51 3tma_A Methyltransferase; thum 98.7 3.1E-08 1E-12 95.2 9.4 94 1-103 211-317 (354)
52 3adn_A Spermidine synthase; am 98.7 9.6E-09 3.3E-13 97.0 5.2 99 2-103 92-198 (294)
53 3mti_A RRNA methylase; SAM-dep 98.7 8.4E-08 2.9E-12 82.7 10.7 92 2-103 31-135 (185)
54 1ixk_A Methyltransferase; open 98.7 3.6E-08 1.2E-12 93.6 9.1 94 1-104 126-246 (315)
55 2b3t_A Protein methyltransfera 98.7 3.5E-08 1.2E-12 91.3 8.3 91 2-102 118-237 (276)
56 3c3p_A Methyltransferase; NP_9 98.7 5.9E-08 2E-12 85.7 9.3 93 2-102 65-159 (210)
57 2pt6_A Spermidine synthase; tr 98.7 5.6E-08 1.9E-12 92.8 9.8 96 2-103 125-230 (321)
58 1mjf_A Spermidine synthase; sp 98.7 6.7E-08 2.3E-12 90.3 9.9 93 2-103 84-193 (281)
59 2o07_A Spermidine synthase; st 98.7 6.4E-08 2.2E-12 91.7 9.5 96 2-103 104-209 (304)
60 1uwv_A 23S rRNA (uracil-5-)-me 98.6 4.3E-08 1.5E-12 97.1 8.2 95 1-103 294-389 (433)
61 2fca_A TRNA (guanine-N(7)-)-me 98.6 2E-07 6.8E-12 83.1 11.8 96 2-105 47-154 (213)
62 4dzr_A Protein-(glutamine-N5) 98.6 3.5E-08 1.2E-12 86.1 6.6 95 2-102 39-164 (215)
63 1yzh_A TRNA (guanine-N(7)-)-me 98.6 6.1E-08 2.1E-12 86.0 8.0 96 2-105 50-157 (214)
64 2b2c_A Spermidine synthase; be 98.6 8.1E-08 2.8E-12 91.5 9.2 96 2-103 117-222 (314)
65 2hnk_A SAM-dependent O-methylt 98.6 1.8E-07 6.2E-12 84.4 10.7 98 2-103 69-181 (239)
66 1l3i_A Precorrin-6Y methyltran 98.6 2.2E-07 7.7E-12 79.3 10.6 92 2-103 42-134 (192)
67 2r6z_A UPF0341 protein in RSP 98.6 4.8E-08 1.6E-12 90.5 6.6 72 1-78 91-169 (258)
68 2frx_A Hypothetical protein YE 98.6 1.1E-07 3.7E-12 95.7 9.5 95 1-104 125-246 (479)
69 2gpy_A O-methyltransferase; st 98.6 1.1E-07 3.9E-12 85.2 8.4 96 2-102 63-159 (233)
70 3dmg_A Probable ribosomal RNA 98.6 5.1E-08 1.7E-12 95.3 6.5 91 1-103 241-340 (381)
71 3hm2_A Precorrin-6Y C5,15-meth 98.6 1.8E-07 6.1E-12 79.6 9.2 93 2-103 34-127 (178)
72 1uir_A Polyamine aminopropyltr 98.6 2.3E-07 8E-12 88.0 10.7 96 2-103 86-195 (314)
73 2qm3_A Predicted methyltransfe 98.6 9.4E-08 3.2E-12 92.7 7.7 91 3-101 181-276 (373)
74 1xj5_A Spermidine synthase 1; 98.6 2.3E-07 7.7E-12 89.2 10.3 97 2-103 129-235 (334)
75 3gjy_A Spermidine synthase; AP 98.5 2.5E-07 8.4E-12 88.4 10.1 95 2-104 98-201 (317)
76 4hc4_A Protein arginine N-meth 98.5 7.8E-08 2.7E-12 93.9 6.7 88 2-100 92-186 (376)
77 2i7c_A Spermidine synthase; tr 98.5 2.6E-07 9E-12 86.3 10.0 96 2-103 87-192 (283)
78 1o9g_A RRNA methyltransferase; 98.5 3.2E-08 1.1E-12 90.0 3.6 100 1-104 59-215 (250)
79 2oyr_A UPF0341 protein YHIQ; a 98.5 5.6E-08 1.9E-12 90.3 5.2 88 1-97 96-194 (258)
80 4dcm_A Ribosomal RNA large sub 98.5 2.6E-07 9E-12 90.0 10.0 96 1-103 230-334 (375)
81 3kr9_A SAM-dependent methyltra 98.5 8.4E-08 2.9E-12 87.4 5.8 93 2-103 24-119 (225)
82 2nxc_A L11 mtase, ribosomal pr 98.5 9.1E-08 3.1E-12 87.8 6.1 88 2-102 129-217 (254)
83 3gdh_A Trimethylguanosine synt 98.5 6.1E-08 2.1E-12 87.2 4.8 90 1-101 86-179 (241)
84 3ldg_A Putative uncharacterize 98.5 1.6E-07 5.6E-12 91.8 8.1 96 1-106 202-346 (384)
85 1o54_A SAM-dependent O-methylt 98.5 2E-07 6.8E-12 86.1 8.3 93 1-103 120-213 (277)
86 1dus_A MJ0882; hypothetical pr 98.5 2.5E-07 8.7E-12 79.1 8.0 91 2-103 61-157 (194)
87 1jsx_A Glucose-inhibited divis 98.5 1.6E-07 5.5E-12 82.2 6.9 92 2-103 74-165 (207)
88 3mb5_A SAM-dependent methyltra 98.5 2.8E-07 9.5E-12 83.6 8.6 92 2-103 102-194 (255)
89 3lec_A NADB-rossmann superfami 98.5 1.2E-07 4E-12 86.7 6.0 130 2-173 30-161 (230)
90 3tm4_A TRNA (guanine N2-)-meth 98.5 1.9E-07 6.5E-12 90.6 7.8 93 1-103 225-330 (373)
91 2vdv_E TRNA (guanine-N(7)-)-me 98.5 2.8E-07 9.6E-12 83.7 8.4 99 1-107 57-176 (246)
92 3ldu_A Putative methylase; str 98.5 1.8E-07 6.1E-12 91.5 6.8 71 1-81 203-313 (385)
93 3bwc_A Spermidine synthase; SA 98.4 6E-07 2E-11 84.7 9.8 97 2-103 104-210 (304)
94 3orh_A Guanidinoacetate N-meth 98.4 3.4E-07 1.1E-11 83.0 7.6 91 2-101 69-168 (236)
95 3k0b_A Predicted N6-adenine-sp 98.4 2.5E-07 8.7E-12 90.7 7.3 71 1-81 209-319 (393)
96 3gnl_A Uncharacterized protein 98.4 2E-07 6.8E-12 85.9 5.9 92 2-102 30-124 (244)
97 2b9e_A NOL1/NOP2/SUN domain fa 98.4 5.7E-07 2E-11 85.4 9.0 72 1-78 110-182 (309)
98 2yvl_A TRMI protein, hypotheti 98.4 5.6E-07 1.9E-11 80.8 8.5 91 2-103 100-190 (248)
99 2yxd_A Probable cobalt-precorr 98.4 2.3E-06 7.9E-11 72.5 11.7 88 2-103 44-131 (183)
100 2f8l_A Hypothetical protein LM 98.4 3E-07 1E-11 87.9 6.7 94 1-105 138-258 (344)
101 3grz_A L11 mtase, ribosomal pr 98.4 7.3E-08 2.5E-12 84.6 2.1 89 2-102 69-158 (205)
102 3bzb_A Uncharacterized protein 98.4 8.3E-07 2.8E-11 82.6 9.1 100 2-104 88-206 (281)
103 1sqg_A SUN protein, FMU protei 98.4 5.7E-07 1.9E-11 88.8 8.0 95 1-104 254-374 (429)
104 2h00_A Methyltransferase 10 do 98.4 1.3E-07 4.5E-12 85.9 2.9 76 1-80 73-151 (254)
105 1yb2_A Hypothetical protein TA 98.3 8.8E-07 3E-11 81.8 8.2 91 2-103 119-211 (275)
106 1fbn_A MJ fibrillarin homologu 98.3 4.8E-06 1.6E-10 74.6 12.4 92 2-102 83-177 (230)
107 3jwh_A HEN1; methyltransferase 98.3 3.1E-06 1.1E-10 74.7 10.9 162 2-177 38-211 (217)
108 3jwg_A HEN1, methyltransferase 98.3 3.2E-06 1.1E-10 74.5 10.7 145 2-157 38-189 (219)
109 3ll7_A Putative methyltransfer 98.3 6.8E-07 2.3E-11 88.2 6.8 69 1-78 101-171 (410)
110 1zx0_A Guanidinoacetate N-meth 98.3 1.1E-06 3.9E-11 78.8 7.7 92 2-102 69-169 (236)
111 2yxl_A PH0851 protein, 450AA l 98.3 9.3E-07 3.2E-11 87.9 7.2 96 1-104 267-389 (450)
112 3q7e_A Protein arginine N-meth 98.3 1.2E-06 4.1E-11 84.2 7.7 90 2-101 75-171 (349)
113 3r0q_C Probable protein argini 98.3 6.9E-07 2.3E-11 86.8 5.8 89 2-101 72-167 (376)
114 2pwy_A TRNA (adenine-N(1)-)-me 98.3 1.6E-06 5.4E-11 78.3 7.8 92 2-103 105-198 (258)
115 3kkz_A Uncharacterized protein 98.2 2.6E-06 8.7E-11 77.8 8.9 93 2-103 55-150 (267)
116 3f4k_A Putative methyltransfer 98.2 2.2E-06 7.6E-11 77.3 8.3 93 2-103 55-150 (257)
117 3ckk_A TRNA (guanine-N(7)-)-me 98.2 3.3E-06 1.1E-10 76.7 9.5 98 2-106 55-170 (235)
118 2pjd_A Ribosomal RNA small sub 98.2 1.1E-06 3.7E-11 84.1 6.4 90 2-104 205-304 (343)
119 1g6q_1 HnRNP arginine N-methyl 98.2 1.7E-06 5.7E-11 82.4 7.5 90 2-101 47-143 (328)
120 3o4f_A Spermidine synthase; am 98.2 1.1E-06 3.9E-11 82.9 6.2 99 3-104 93-199 (294)
121 3hem_A Cyclopropane-fatty-acyl 98.2 3.4E-06 1.1E-10 78.6 9.3 90 2-103 81-183 (302)
122 3m70_A Tellurite resistance pr 98.2 2E-06 7E-11 79.2 7.6 89 2-103 129-223 (286)
123 2fyt_A Protein arginine N-meth 98.2 1.6E-06 5.4E-11 83.1 7.0 89 2-100 73-168 (340)
124 3dh0_A SAM dependent methyltra 98.2 4.3E-06 1.5E-10 73.5 9.2 94 2-104 46-144 (219)
125 3lbf_A Protein-L-isoaspartate 98.2 1.2E-06 4.1E-11 76.8 5.6 90 2-105 86-176 (210)
126 2cmg_A Spermidine synthase; tr 98.2 3.9E-07 1.3E-11 84.5 2.3 89 2-103 81-171 (262)
127 2b25_A Hypothetical protein; s 98.2 1.4E-06 4.9E-11 82.7 6.0 98 2-103 114-219 (336)
128 1g8a_A Fibrillarin-like PRE-rR 98.2 2.3E-06 7.9E-11 76.1 6.9 93 2-102 82-177 (227)
129 3c6k_A Spermine synthase; sper 98.2 6.5E-06 2.2E-10 80.2 10.5 101 3-104 215-332 (381)
130 1i9g_A Hypothetical protein RV 98.2 3E-06 1E-10 77.8 7.6 93 2-103 108-203 (280)
131 3cvo_A Methyltransferase-like 98.2 6.4E-06 2.2E-10 73.7 9.5 92 3-101 38-152 (202)
132 3dlc_A Putative S-adenosyl-L-m 98.2 3.6E-06 1.2E-10 73.4 7.6 93 2-103 52-148 (219)
133 2ipx_A RRNA 2'-O-methyltransfe 98.1 5.2E-06 1.8E-10 74.3 8.4 92 2-102 86-181 (233)
134 2pbf_A Protein-L-isoaspartate 98.1 2.2E-06 7.5E-11 76.2 5.7 101 2-104 89-194 (227)
135 4htf_A S-adenosylmethionine-de 98.1 4E-06 1.4E-10 77.2 7.4 93 2-103 77-173 (285)
136 2y1w_A Histone-arginine methyl 98.1 2.9E-06 9.8E-11 81.4 6.0 90 2-102 59-154 (348)
137 3b3j_A Histone-arginine methyl 98.1 1.8E-06 6E-11 86.8 4.3 91 2-103 167-263 (480)
138 3mgg_A Methyltransferase; NYSG 98.1 7.8E-06 2.7E-10 74.7 8.2 96 2-106 46-145 (276)
139 3fpf_A Mtnas, putative unchara 98.1 1.2E-05 4.1E-10 76.0 9.6 90 2-103 131-222 (298)
140 1kpg_A CFA synthase;, cyclopro 98.1 9.6E-06 3.3E-10 74.6 8.8 90 2-103 73-168 (287)
141 1ve3_A Hypothetical protein PH 98.1 9.9E-06 3.4E-10 71.3 8.3 91 2-104 47-143 (227)
142 1i1n_A Protein-L-isoaspartate 98.0 6.6E-06 2.2E-10 73.0 7.0 96 2-103 86-182 (226)
143 3v97_A Ribosomal RNA large sub 98.0 6E-06 2.1E-10 86.7 7.7 82 19-106 258-350 (703)
144 1jg1_A PIMT;, protein-L-isoasp 98.0 6.4E-06 2.2E-10 73.9 6.9 91 2-104 100-190 (235)
145 2xvm_A Tellurite resistance pr 98.0 7.1E-06 2.4E-10 70.6 6.9 91 2-104 41-137 (199)
146 3fzg_A 16S rRNA methylase; met 98.0 1.6E-05 5.5E-10 70.7 9.1 94 2-112 58-159 (200)
147 1nkv_A Hypothetical protein YJ 98.0 5.6E-06 1.9E-10 74.6 6.3 92 2-103 45-140 (256)
148 3sm3_A SAM-dependent methyltra 98.0 1.1E-05 3.8E-10 71.2 7.7 96 2-103 39-141 (235)
149 3uwp_A Histone-lysine N-methyl 98.0 1.4E-05 4.8E-10 78.9 8.7 96 2-102 182-287 (438)
150 1ne2_A Hypothetical protein TA 98.0 1.4E-05 4.9E-10 69.5 7.9 80 1-101 59-144 (200)
151 3thr_A Glycine N-methyltransfe 98.0 1.3E-05 4.6E-10 73.7 7.8 99 2-104 66-176 (293)
152 1xxl_A YCGJ protein; structura 98.0 1.7E-05 5.9E-10 71.2 8.1 92 2-104 30-125 (239)
153 2kw5_A SLR1183 protein; struct 98.0 2.8E-05 9.5E-10 67.5 9.2 91 2-104 38-132 (202)
154 2fk8_A Methoxy mycolic acid sy 97.9 2E-05 6.8E-10 73.7 8.5 91 2-104 99-195 (318)
155 4fzv_A Putative methyltransfer 97.9 8E-05 2.7E-09 72.1 13.0 99 1-104 156-284 (359)
156 3gu3_A Methyltransferase; alph 97.9 1.1E-05 3.9E-10 74.5 6.7 93 2-105 31-128 (284)
157 1ri5_A MRNA capping enzyme; me 97.9 8.4E-06 2.9E-10 74.8 5.8 94 2-103 73-174 (298)
158 1dl5_A Protein-L-isoaspartate 97.9 9.9E-06 3.4E-10 76.5 6.4 90 2-103 84-175 (317)
159 3ocj_A Putative exported prote 97.9 1.1E-05 3.8E-10 75.3 6.6 93 2-103 127-227 (305)
160 3vc1_A Geranyl diphosphate 2-C 97.9 1E-05 3.5E-10 75.8 6.3 93 2-103 126-221 (312)
161 2ex4_A Adrenal gland protein A 97.9 5.6E-06 1.9E-10 74.3 4.2 92 2-103 88-185 (241)
162 2yxe_A Protein-L-isoaspartate 97.9 1E-05 3.4E-10 71.1 5.7 91 2-104 86-178 (215)
163 3bus_A REBM, methyltransferase 97.9 2.1E-05 7.1E-10 71.6 7.8 93 2-103 70-166 (273)
164 2pxx_A Uncharacterized protein 97.9 8.5E-06 2.9E-10 70.9 4.9 90 2-103 51-159 (215)
165 2o57_A Putative sarcosine dime 97.9 2.3E-05 7.7E-10 72.4 8.0 94 2-104 91-188 (297)
166 1vl5_A Unknown conserved prote 97.9 2.7E-05 9.1E-10 70.5 8.3 91 2-103 46-140 (260)
167 3ofk_A Nodulation protein S; N 97.9 9.1E-06 3.1E-10 71.3 4.9 89 2-104 60-155 (216)
168 2okc_A Type I restriction enzy 97.9 6.3E-06 2.1E-10 81.7 4.2 95 1-103 179-307 (445)
169 3g5t_A Trans-aconitate 3-methy 97.9 2.1E-05 7E-10 73.1 7.3 96 2-101 45-147 (299)
170 2ar0_A M.ecoki, type I restric 97.9 1.1E-05 3.8E-10 82.2 5.8 97 1-104 177-313 (541)
171 1nt2_A Fibrillarin-like PRE-rR 97.9 2.8E-05 9.6E-10 69.2 7.6 93 2-102 66-160 (210)
172 1u2z_A Histone-lysine N-methyl 97.9 1.8E-05 6.3E-10 78.5 7.0 95 2-102 251-358 (433)
173 3lcc_A Putative methyl chlorid 97.9 1.4E-05 4.7E-10 71.3 5.6 92 2-104 75-172 (235)
174 1r18_A Protein-L-isoaspartate( 97.9 8.9E-06 3E-10 72.5 4.2 92 2-104 93-195 (227)
175 3q87_B N6 adenine specific DNA 97.8 1.4E-05 4.8E-10 68.4 5.2 79 2-103 32-123 (170)
176 3g5l_A Putative S-adenosylmeth 97.8 2.8E-05 9.7E-10 70.0 7.4 89 2-103 53-145 (253)
177 3e8s_A Putative SAM dependent 97.8 4.5E-05 1.5E-09 66.7 8.3 90 2-104 61-153 (227)
178 3g07_A 7SK snRNA methylphospha 97.8 1.2E-05 4.2E-10 74.8 4.5 102 2-103 55-220 (292)
179 1wzn_A SAM-dependent methyltra 97.8 2.6E-05 9E-10 70.0 6.3 89 2-103 50-145 (252)
180 2p8j_A S-adenosylmethionine-de 97.8 2E-05 6.9E-10 68.5 5.1 91 2-103 32-128 (209)
181 3i9f_A Putative type 11 methyl 97.8 5E-05 1.7E-09 64.0 7.3 84 2-104 26-113 (170)
182 3bkw_A MLL3908 protein, S-aden 97.8 2.3E-05 7.9E-10 69.7 5.4 89 2-103 52-144 (243)
183 3d2l_A SAM-dependent methyltra 97.8 4E-05 1.4E-09 68.1 6.7 88 2-103 42-137 (243)
184 3lkd_A Type I restriction-modi 97.7 3.5E-05 1.2E-09 78.6 7.0 100 1-104 229-359 (542)
185 4gek_A TRNA (CMO5U34)-methyltr 97.7 6.5E-05 2.2E-09 69.3 7.8 92 2-103 79-178 (261)
186 1vbf_A 231AA long hypothetical 97.7 2.5E-05 8.7E-10 69.3 4.6 87 2-104 79-166 (231)
187 1m6y_A S-adenosyl-methyltransf 97.7 7.2E-05 2.5E-09 70.7 7.3 72 1-78 34-106 (301)
188 3l8d_A Methyltransferase; stru 97.7 0.0001 3.4E-09 65.6 7.8 88 2-103 62-153 (242)
189 3dli_A Methyltransferase; PSI- 97.7 0.00048 1.7E-08 61.4 12.4 86 2-104 50-141 (240)
190 4df3_A Fibrillarin-like rRNA/T 97.7 5E-05 1.7E-09 69.3 5.9 93 2-102 86-181 (233)
191 4fsd_A Arsenic methyltransfera 97.6 7.3E-05 2.5E-09 72.4 7.2 99 2-103 92-203 (383)
192 3id6_C Fibrillarin-like rRNA/T 97.6 0.00052 1.8E-08 62.4 12.4 93 2-102 85-180 (232)
193 3h2b_A SAM-dependent methyltra 97.6 0.00011 3.7E-09 63.7 7.5 87 2-104 50-142 (203)
194 3khk_A Type I restriction-modi 97.6 2.5E-05 8.5E-10 79.7 3.7 96 1-103 252-395 (544)
195 3dtn_A Putative methyltransfer 97.6 3.6E-05 1.2E-09 68.4 4.2 90 2-103 53-148 (234)
196 2yqz_A Hypothetical protein TT 97.6 6.6E-05 2.3E-09 67.5 6.1 89 2-102 48-140 (263)
197 1y8c_A S-adenosylmethionine-de 97.6 4.3E-05 1.5E-09 67.8 4.7 89 2-103 46-142 (246)
198 1xtp_A LMAJ004091AAA; SGPP, st 97.6 3.2E-05 1.1E-09 69.3 3.9 90 2-103 102-197 (254)
199 3g2m_A PCZA361.24; SAM-depende 97.6 4.7E-05 1.6E-09 70.6 4.9 94 2-104 91-191 (299)
200 2p7i_A Hypothetical protein; p 97.6 6.3E-05 2.2E-09 66.6 5.5 87 2-104 51-142 (250)
201 3ggd_A SAM-dependent methyltra 97.6 0.00012 4E-09 65.6 7.2 92 2-103 65-163 (245)
202 3ou2_A SAM-dependent methyltra 97.6 7.5E-05 2.6E-09 65.0 5.8 87 2-104 55-147 (218)
203 3lcv_B Sisomicin-gentamicin re 97.6 0.00014 4.7E-09 67.7 7.7 95 2-112 141-243 (281)
204 2gb4_A Thiopurine S-methyltran 97.6 7.7E-05 2.6E-09 68.4 5.7 95 2-101 77-189 (252)
205 3ujc_A Phosphoethanolamine N-m 97.6 3.9E-05 1.3E-09 69.0 3.7 91 2-104 64-160 (266)
206 3e23_A Uncharacterized protein 97.6 8.3E-05 2.8E-09 65.0 5.7 84 2-103 52-141 (211)
207 3cgg_A SAM-dependent methyltra 97.6 9.5E-05 3.2E-09 62.9 5.9 87 2-104 55-148 (195)
208 1pjz_A Thiopurine S-methyltran 97.5 4.2E-05 1.4E-09 67.3 3.4 94 2-100 31-137 (203)
209 3bkx_A SAM-dependent methyltra 97.5 0.00011 3.6E-09 66.9 6.1 97 2-104 52-160 (275)
210 3hnr_A Probable methyltransfer 97.5 5.4E-05 1.9E-09 66.4 3.6 86 2-103 54-145 (220)
211 2a14_A Indolethylamine N-methy 97.5 1.7E-05 5.8E-10 72.6 0.1 101 2-103 64-197 (263)
212 4gqb_A Protein arginine N-meth 97.5 7.4E-05 2.5E-09 77.4 4.6 88 2-100 366-464 (637)
213 3iv6_A Putative Zn-dependent a 97.4 0.00019 6.6E-09 66.4 6.7 90 2-104 54-149 (261)
214 2p35_A Trans-aconitate 2-methy 97.4 0.00011 3.9E-09 65.8 5.0 87 2-103 42-132 (259)
215 3m33_A Uncharacterized protein 97.4 9.3E-05 3.2E-09 65.8 4.1 82 2-100 57-139 (226)
216 2ih2_A Modification methylase 97.4 5.8E-05 2E-09 73.2 3.0 84 2-104 48-165 (421)
217 2bm8_A Cephalosporin hydroxyla 97.4 5.6E-05 1.9E-09 68.4 2.5 90 2-103 90-187 (236)
218 2i62_A Nicotinamide N-methyltr 97.4 3E-05 1E-09 69.8 0.6 101 2-103 65-198 (265)
219 3pfg_A N-methyltransferase; N, 97.4 6.5E-05 2.2E-09 68.0 2.9 84 2-102 59-150 (263)
220 2gs9_A Hypothetical protein TT 97.4 0.00018 6.2E-09 62.7 5.4 85 2-104 45-133 (211)
221 2vdw_A Vaccinia virus capping 97.4 0.00062 2.1E-08 64.0 9.4 98 2-104 57-170 (302)
222 2h1r_A Dimethyladenosine trans 97.4 0.00017 5.8E-09 67.7 5.4 76 2-90 51-127 (299)
223 3ua3_A Protein arginine N-meth 97.3 0.00034 1.2E-08 73.0 7.5 94 2-100 418-531 (745)
224 3bgv_A MRNA CAP guanine-N7 met 97.3 0.00025 8.5E-09 66.2 6.0 101 2-103 43-155 (313)
225 3s1s_A Restriction endonucleas 97.3 7.4E-05 2.5E-09 79.0 2.2 99 1-103 329-465 (878)
226 1ej0_A FTSJ; methyltransferase 97.3 0.00019 6.4E-09 59.7 4.2 85 2-103 31-136 (180)
227 1qzz_A RDMB, aclacinomycin-10- 97.2 0.0005 1.7E-08 65.6 6.9 92 2-104 191-288 (374)
228 3p2e_A 16S rRNA methylase; met 97.2 0.00015 5.2E-09 65.1 3.0 94 2-103 33-139 (225)
229 3mq2_A 16S rRNA methyltransfer 97.2 0.00015 5.1E-09 63.7 2.7 92 2-103 36-140 (218)
230 2r3s_A Uncharacterized protein 97.2 0.00072 2.5E-08 63.3 7.5 93 2-104 174-272 (335)
231 1zq9_A Probable dimethyladenos 97.1 0.00047 1.6E-08 64.1 5.8 79 2-92 37-116 (285)
232 3bxo_A N,N-dimethyltransferase 97.1 0.00012 4E-09 64.8 1.1 84 2-102 49-140 (239)
233 3opn_A Putative hemolysin; str 97.1 0.00021 7.2E-09 64.7 2.8 90 2-102 46-136 (232)
234 1tw3_A COMT, carminomycin 4-O- 97.1 0.00056 1.9E-08 65.0 5.8 92 2-104 192-289 (360)
235 3hp7_A Hemolysin, putative; st 97.0 0.0011 3.6E-08 62.5 7.3 89 2-102 94-184 (291)
236 3g7u_A Cytosine-specific methy 97.0 0.00037 1.3E-08 67.7 4.2 67 1-78 9-79 (376)
237 2avn_A Ubiquinone/menaquinone 97.0 0.0011 3.9E-08 59.9 6.7 85 2-103 63-152 (260)
238 3htx_A HEN1; HEN1, small RNA m 97.0 0.0063 2.1E-07 64.8 12.9 91 2-103 730-834 (950)
239 3cc8_A Putative methyltransfer 96.9 0.00047 1.6E-08 60.2 3.7 87 2-104 41-131 (230)
240 1p91_A Ribosomal RNA large sub 96.9 0.0007 2.4E-08 61.3 5.0 85 2-103 94-178 (269)
241 3ccf_A Cyclopropane-fatty-acyl 96.9 0.0011 3.9E-08 60.5 6.3 86 2-104 66-155 (279)
242 2qy6_A UPF0209 protein YFCK; s 96.9 0.002 6.8E-08 59.4 7.8 101 2-104 69-213 (257)
243 3frh_A 16S rRNA methylase; met 96.9 0.0039 1.3E-07 57.3 9.5 93 2-112 114-213 (253)
244 1g55_A DNA cytosine methyltran 96.9 0.00031 1.1E-08 67.3 2.1 66 1-78 9-76 (343)
245 2nyu_A Putative ribosomal RNA 96.9 0.0016 5.5E-08 55.7 6.4 85 2-103 31-145 (196)
246 2ip2_A Probable phenazine-spec 96.8 0.00073 2.5E-08 63.5 4.3 92 2-104 176-273 (334)
247 3i53_A O-methyltransferase; CO 96.8 0.0032 1.1E-07 59.1 8.2 92 2-104 178-275 (332)
248 3mcz_A O-methyltransferase; ad 96.8 0.0014 4.7E-08 62.0 5.7 95 2-104 188-288 (352)
249 3dp7_A SAM-dependent methyltra 96.8 0.0021 7.1E-08 61.5 6.9 95 2-104 188-288 (363)
250 1x19_A CRTF-related protein; m 96.8 0.0027 9.4E-08 60.3 7.7 92 2-104 199-296 (359)
251 3gwz_A MMCR; methyltransferase 96.7 0.0056 1.9E-07 58.6 9.9 92 2-104 211-308 (369)
252 3dou_A Ribosomal RNA large sub 96.7 0.00097 3.3E-08 58.2 3.9 84 2-103 34-139 (191)
253 4hg2_A Methyltransferase type 96.7 0.0012 4.2E-08 60.6 4.7 85 2-103 48-135 (257)
254 3ege_A Putative methyltransfer 96.7 0.0012 4E-08 59.9 4.4 85 2-104 43-131 (261)
255 1vlm_A SAM-dependent methyltra 96.5 0.0023 8E-08 56.2 5.2 81 2-104 56-140 (219)
256 2qe6_A Uncharacterized protein 96.5 0.011 3.7E-07 54.5 9.8 96 2-104 86-197 (274)
257 4azs_A Methyltransferase WBDD; 96.5 0.0056 1.9E-07 62.3 8.5 65 2-75 75-139 (569)
258 4e2x_A TCAB9; kijanose, tetron 96.5 0.0031 1.1E-07 61.1 6.0 89 2-104 116-209 (416)
259 1g60_A Adenine-specific methyl 96.4 0.0032 1.1E-07 57.6 5.3 51 51-103 6-74 (260)
260 2c7p_A Modification methylase 96.4 0.0017 5.7E-08 61.9 3.5 62 1-78 18-79 (327)
261 3gru_A Dimethyladenosine trans 96.4 0.0037 1.3E-07 58.7 5.7 77 2-91 59-136 (295)
262 2plw_A Ribosomal RNA methyltra 96.4 0.0026 8.8E-08 54.8 4.2 85 2-102 31-153 (201)
263 2aot_A HMT, histamine N-methyl 96.3 0.02 6.8E-07 52.6 10.4 99 2-103 61-172 (292)
264 1eg2_A Modification methylase 96.3 0.0048 1.7E-07 58.5 6.0 54 49-104 38-107 (319)
265 3ufb_A Type I restriction-modi 96.2 0.004 1.4E-07 63.1 5.5 98 1-103 225-362 (530)
266 1af7_A Chemotaxis receptor met 96.2 0.0032 1.1E-07 58.5 4.4 102 2-106 114-255 (274)
267 2g72_A Phenylethanolamine N-me 96.2 0.0011 3.7E-08 61.0 0.9 100 2-102 80-214 (289)
268 2wk1_A NOVP; transferase, O-me 96.1 0.0028 9.6E-08 59.3 3.4 68 29-101 173-242 (282)
269 1boo_A Protein (N-4 cytosine-s 96.0 0.007 2.4E-07 57.3 5.8 57 48-106 13-87 (323)
270 3tqs_A Ribosomal RNA small sub 95.8 0.0054 1.8E-07 56.3 3.6 79 2-91 38-118 (255)
271 3ftd_A Dimethyladenosine trans 95.7 0.014 4.6E-07 53.3 6.0 77 2-92 40-118 (249)
272 2qrv_A DNA (cytosine-5)-methyl 95.7 0.0093 3.2E-07 56.0 5.0 67 1-78 23-91 (295)
273 1qam_A ERMC' methyltransferase 95.6 0.01 3.4E-07 53.7 4.6 78 2-92 39-117 (244)
274 3sso_A Methyltransferase; macr 95.5 0.005 1.7E-07 60.5 2.5 86 4-103 233-324 (419)
275 2zig_A TTHA0409, putative modi 95.4 0.016 5.6E-07 53.8 5.6 72 31-106 5-100 (297)
276 3fut_A Dimethyladenosine trans 95.4 0.011 3.8E-07 54.8 4.3 78 2-92 55-133 (271)
277 1yub_A Ermam, rRNA methyltrans 95.4 0.00027 9.4E-09 63.9 -6.5 74 2-88 38-112 (245)
278 3fpc_A NADP-dependent alcohol 95.3 0.025 8.6E-07 53.5 6.4 89 3-102 177-265 (352)
279 1pl8_A Human sorbitol dehydrog 94.7 0.16 5.4E-06 48.0 10.2 87 3-102 182-272 (356)
280 3m6i_A L-arabinitol 4-dehydrog 94.5 0.12 4.2E-06 48.8 9.1 90 2-103 189-283 (363)
281 3s2e_A Zinc-containing alcohol 94.5 0.07 2.4E-06 50.1 7.3 87 2-102 176-262 (340)
282 2wa2_A Non-structural protein 94.4 0.0045 1.5E-07 57.5 -1.4 86 2-101 91-191 (276)
283 4a2c_A Galactitol-1-phosphate 94.3 0.14 4.9E-06 47.8 8.9 91 2-103 170-260 (346)
284 3ip1_A Alcohol dehydrogenase, 94.3 0.11 3.8E-06 50.1 8.2 90 3-102 224-317 (404)
285 1f8f_A Benzyl alcohol dehydrog 94.2 0.074 2.5E-06 50.6 6.8 88 3-102 201-288 (371)
286 1vj0_A Alcohol dehydrogenase, 94.2 0.087 3E-06 50.4 7.2 88 2-102 205-297 (380)
287 1kol_A Formaldehyde dehydrogen 94.2 0.11 3.7E-06 49.9 7.9 89 3-102 196-299 (398)
288 3fbg_A Putative arginate lyase 94.1 0.081 2.8E-06 49.9 6.7 86 3-102 162-247 (346)
289 4h0n_A DNMT2; SAH binding, tra 94.1 0.026 8.8E-07 53.8 3.2 66 1-78 10-77 (333)
290 4ej6_A Putative zinc-binding d 94.0 0.066 2.3E-06 51.1 5.9 91 2-102 192-283 (370)
291 3lst_A CALO1 methyltransferase 94.0 0.02 7E-07 54.1 2.2 89 2-104 193-287 (348)
292 2oxt_A Nucleoside-2'-O-methylt 93.9 0.0048 1.7E-07 56.9 -2.2 86 2-101 83-183 (265)
293 3uko_A Alcohol dehydrogenase c 93.8 0.074 2.5E-06 50.8 5.9 88 3-103 204-295 (378)
294 2xyq_A Putative 2'-O-methyl tr 93.8 0.02 6.9E-07 53.6 1.8 75 3-102 79-170 (290)
295 3jv7_A ADH-A; dehydrogenase, n 93.8 0.17 5.7E-06 47.5 8.3 88 3-102 182-269 (345)
296 2zfu_A Nucleomethylin, cerebra 93.8 0.031 1.1E-06 48.4 2.9 73 2-103 76-151 (215)
297 1qyr_A KSGA, high level kasuga 93.7 0.043 1.5E-06 50.1 3.8 79 2-91 30-112 (252)
298 1e3j_A NADP(H)-dependent ketos 93.7 0.25 8.4E-06 46.5 9.2 88 3-102 179-270 (352)
299 1wg8_A Predicted S-adenosylmet 93.5 0.11 3.9E-06 48.4 6.3 74 2-88 31-106 (285)
300 1e3i_A Alcohol dehydrogenase, 93.1 0.24 8.2E-06 47.1 8.1 87 3-103 206-297 (376)
301 3qv2_A 5-cytosine DNA methyltr 93.1 0.066 2.3E-06 50.8 4.1 65 1-78 17-84 (327)
302 4dup_A Quinone oxidoreductase; 93.0 0.16 5.5E-06 47.9 6.8 87 3-103 179-265 (353)
303 1cdo_A Alcohol dehydrogenase; 93.0 0.2 6.7E-06 47.6 7.3 86 3-102 203-293 (374)
304 2dph_A Formaldehyde dismutase; 93.0 0.11 3.7E-06 50.0 5.5 88 3-101 196-297 (398)
305 3pi7_A NADH oxidoreductase; gr 93.0 0.12 4.2E-06 48.6 5.8 88 3-103 176-263 (349)
306 3me5_A Cytosine-specific methy 92.9 0.081 2.8E-06 52.9 4.7 70 1-78 95-177 (482)
307 4dvj_A Putative zinc-dependent 92.9 0.22 7.4E-06 47.4 7.5 87 3-102 183-269 (363)
308 1p0f_A NADP-dependent alcohol 92.9 0.25 8.4E-06 46.9 7.9 87 3-102 202-292 (373)
309 2fzw_A Alcohol dehydrogenase c 92.9 0.23 8E-06 47.0 7.7 87 3-102 201-291 (373)
310 2jhf_A Alcohol dehydrogenase E 92.8 0.2 6.8E-06 47.6 7.2 86 3-102 202-292 (374)
311 2d8a_A PH0655, probable L-thre 92.8 0.14 4.8E-06 48.2 5.9 89 3-103 178-267 (348)
312 4eez_A Alcohol dehydrogenase 1 92.5 0.42 1.4E-05 44.6 8.9 90 3-103 174-263 (348)
313 2c0c_A Zinc binding alcohol de 92.5 0.32 1.1E-05 46.1 8.0 87 2-102 174-260 (362)
314 2b5w_A Glucose dehydrogenase; 92.4 0.079 2.7E-06 50.2 3.7 86 3-103 183-273 (357)
315 2h6e_A ADH-4, D-arabinose 1-de 92.1 0.4 1.4E-05 44.9 8.2 85 3-102 181-268 (344)
316 1rjw_A ADH-HT, alcohol dehydro 91.9 0.29 9.9E-06 45.9 6.9 88 2-103 174-261 (339)
317 4a6d_A Hydroxyindole O-methylt 91.7 0.17 5.9E-06 48.0 5.1 91 2-104 188-284 (353)
318 4eye_A Probable oxidoreductase 91.7 0.3 1E-05 45.8 6.7 86 3-102 171-256 (342)
319 2ld4_A Anamorsin; methyltransf 91.4 0.059 2E-06 45.2 1.4 71 22-102 25-100 (176)
320 3vyw_A MNMC2; tRNA wobble urid 91.4 0.1 3.5E-06 49.2 3.1 75 50-161 168-249 (308)
321 2dq4_A L-threonine 3-dehydroge 91.3 0.12 4.2E-06 48.5 3.6 87 3-103 175-262 (343)
322 2p41_A Type II methyltransfera 91.3 0.04 1.4E-06 51.7 0.1 84 2-101 91-189 (305)
323 1pqw_A Polyketide synthase; ro 91.2 0.48 1.6E-05 40.4 7.0 87 4-103 51-137 (198)
324 3uog_A Alcohol dehydrogenase; 91.2 0.27 9.4E-06 46.5 5.9 87 3-103 200-287 (363)
325 3uzu_A Ribosomal RNA small sub 90.9 0.11 3.6E-06 48.2 2.7 49 2-60 51-102 (279)
326 3giw_A Protein of unknown func 90.9 0.43 1.5E-05 44.3 6.8 90 9-103 96-200 (277)
327 4b7c_A Probable oxidoreductase 90.5 0.54 1.9E-05 43.7 7.2 87 3-102 161-247 (336)
328 1wly_A CAAR, 2-haloacrylate re 90.3 0.57 2E-05 43.6 7.2 88 3-103 157-244 (333)
329 3qwb_A Probable quinone oxidor 89.8 0.73 2.5E-05 42.8 7.5 88 3-103 160-247 (334)
330 2eih_A Alcohol dehydrogenase; 89.7 0.62 2.1E-05 43.5 7.0 88 3-103 178-265 (343)
331 3gms_A Putative NADPH:quinone 89.7 0.46 1.6E-05 44.4 6.0 88 3-103 156-243 (340)
332 3jyn_A Quinone oxidoreductase; 89.6 0.6 2.1E-05 43.3 6.7 88 3-103 152-239 (325)
333 3hzh_A Chemotaxis response reg 89.1 4.3 0.00015 32.5 10.9 55 18-78 37-91 (157)
334 1uuf_A YAHK, zinc-type alcohol 89.1 0.36 1.2E-05 45.9 4.9 83 3-102 205-287 (369)
335 3cu5_A Two component transcrip 88.8 5.1 0.00018 31.4 11.0 54 19-78 4-57 (141)
336 3heb_A Response regulator rece 88.8 7.4 0.00025 30.7 12.1 56 18-78 5-67 (152)
337 1qor_A Quinone oxidoreductase; 88.8 0.72 2.5E-05 42.7 6.6 88 3-103 152-239 (327)
338 2j8z_A Quinone oxidoreductase; 88.6 0.78 2.7E-05 43.2 6.8 88 3-103 174-261 (354)
339 3nx4_A Putative oxidoreductase 88.3 0.29 1E-05 45.3 3.5 84 3-103 158-241 (324)
340 2zb4_A Prostaglandin reductase 88.1 1.1 3.9E-05 41.9 7.5 88 3-102 172-259 (357)
341 1fp2_A Isoflavone O-methyltran 88.0 0.24 8.4E-06 46.6 2.8 83 2-103 197-288 (352)
342 3jte_A Response regulator rece 87.5 5.1 0.00017 31.1 10.2 54 18-78 4-57 (143)
343 1fp1_D Isoliquiritigenin 2'-O- 87.4 0.31 1.1E-05 46.3 3.2 83 2-103 218-306 (372)
344 1v3u_A Leukotriene B4 12- hydr 87.3 1.5 5.2E-05 40.5 7.8 86 3-102 157-243 (333)
345 3gaz_A Alcohol dehydrogenase s 87.2 1.3 4.4E-05 41.4 7.3 84 3-102 162-245 (343)
346 3h5i_A Response regulator/sens 86.7 9.5 0.00033 29.6 11.8 79 18-105 6-88 (140)
347 1jvb_A NAD(H)-dependent alcoho 86.7 0.69 2.3E-05 43.3 5.1 88 3-102 182-270 (347)
348 1yb5_A Quinone oxidoreductase; 86.6 1.7 5.7E-05 40.9 7.8 87 3-102 182-268 (351)
349 2hcy_A Alcohol dehydrogenase 1 86.4 0.83 2.8E-05 42.7 5.5 88 3-103 181-269 (347)
350 2k4m_A TR8_protein, UPF0146 pr 85.9 0.13 4.6E-06 43.4 -0.2 63 2-91 44-108 (153)
351 1xa0_A Putative NADPH dependen 85.7 0.65 2.2E-05 43.0 4.3 84 3-102 161-245 (328)
352 3h7a_A Short chain dehydrogena 85.7 3.2 0.00011 36.8 8.8 69 2-78 14-91 (252)
353 3gqv_A Enoyl reductase; medium 85.5 1.6 5.5E-05 41.3 7.1 85 3-101 176-261 (371)
354 3eod_A Protein HNR; response r 85.3 10 0.00036 28.7 11.5 53 17-78 7-59 (130)
355 3cg4_A Response regulator rece 85.2 11 0.00038 29.0 11.6 53 17-78 7-59 (142)
356 3ubt_Y Modification methylase 85.2 0.49 1.7E-05 44.0 3.2 63 1-78 7-69 (331)
357 3two_A Mannitol dehydrogenase; 85.2 0.34 1.2E-05 45.5 2.1 78 3-102 187-264 (348)
358 3swr_A DNA (cytosine-5)-methyl 85.1 1.3 4.4E-05 48.1 6.8 67 1-78 547-626 (1002)
359 3lf2_A Short chain oxidoreduct 84.7 10 0.00035 33.6 11.8 70 3-78 16-95 (265)
360 4g81_D Putative hexonate dehyd 84.4 5.6 0.00019 36.0 9.9 133 3-154 17-184 (255)
361 2j3h_A NADP-dependent oxidored 84.3 1.6 5.4E-05 40.6 6.4 87 3-102 167-254 (345)
362 4a0s_A Octenoyl-COA reductase/ 84.0 3.5 0.00012 39.8 8.9 85 3-103 232-336 (447)
363 2vn8_A Reticulon-4-interacting 83.8 1.3 4.3E-05 42.0 5.5 84 3-101 195-278 (375)
364 2cdc_A Glucose dehydrogenase g 83.6 1.1 3.9E-05 42.2 5.1 83 3-102 191-277 (366)
365 3goh_A Alcohol dehydrogenase, 83.5 0.29 9.8E-06 45.3 0.8 76 3-102 153-228 (315)
366 1iz0_A Quinone oxidoreductase; 83.5 1.8 6.3E-05 39.4 6.3 81 3-102 137-217 (302)
367 3tos_A CALS11; methyltransfera 83.0 0.7 2.4E-05 42.4 3.2 54 48-101 158-215 (257)
368 1tmy_A CHEY protein, TMY; chem 83.0 11 0.00038 28.0 9.9 52 19-78 4-55 (120)
369 1piw_A Hypothetical zinc-type 82.8 0.47 1.6E-05 44.8 2.0 83 3-102 190-275 (360)
370 4ft4_B DNA (cytosine-5)-methyl 82.3 0.89 3E-05 47.7 4.1 53 1-64 219-277 (784)
371 3pk0_A Short-chain dehydrogena 82.0 17 0.00057 32.2 12.0 71 2-78 17-96 (262)
372 3rkr_A Short chain oxidoreduct 81.8 19 0.00066 31.6 12.4 70 2-78 36-114 (262)
373 3reo_A (ISO)eugenol O-methyltr 81.6 1.3 4.4E-05 42.0 4.6 84 2-104 212-301 (368)
374 1zg3_A Isoflavanone 4'-O-methy 81.6 1.1 3.8E-05 42.0 4.1 83 2-103 202-293 (358)
375 2qxy_A Response regulator; reg 81.2 11 0.00037 29.1 9.4 52 18-78 5-56 (142)
376 3rqi_A Response regulator prot 80.8 14 0.0005 30.3 10.5 78 18-104 8-88 (184)
377 3cg0_A Response regulator rece 80.7 17 0.00057 27.8 12.0 79 17-104 9-91 (140)
378 4e7p_A Response regulator; DNA 80.6 18 0.00061 28.3 10.7 54 18-78 21-74 (150)
379 1boo_A Protein (N-4 cytosine-s 80.6 0.54 1.8E-05 44.1 1.5 54 1-62 260-313 (323)
380 3eul_A Possible nitrate/nitrit 80.5 14 0.00049 28.9 10.0 55 17-78 15-69 (152)
381 1ys7_A Transcriptional regulat 80.5 25 0.00086 29.7 12.6 79 18-106 8-90 (233)
382 3av4_A DNA (cytosine-5)-methyl 80.4 2.7 9.4E-05 46.9 7.2 67 1-78 858-937 (1330)
383 3i42_A Response regulator rece 80.4 10 0.00035 28.6 8.8 52 18-78 4-55 (127)
384 3iup_A Putative NADPH:quinone 80.0 1.3 4.3E-05 42.2 3.9 80 3-94 183-262 (379)
385 3f6c_A Positive transcription 79.8 13 0.00044 28.2 9.3 49 19-78 3-54 (134)
386 3ilh_A Two component response 79.8 12 0.0004 28.8 9.2 56 18-78 10-68 (146)
387 3krt_A Crotonyl COA reductase; 79.7 3 0.0001 40.6 6.6 85 3-102 240-343 (456)
388 3p8z_A Mtase, non-structural p 79.5 12 0.0004 34.2 9.8 109 2-131 87-215 (267)
389 3gaf_A 7-alpha-hydroxysteroid 79.3 10 0.00035 33.4 9.6 70 2-78 19-97 (256)
390 2r25_B Osmosensing histidine p 79.3 18 0.00062 27.7 10.1 54 19-78 4-60 (133)
391 3p9c_A Caffeic acid O-methyltr 79.3 1.4 4.6E-05 41.9 3.9 84 2-104 210-299 (364)
392 1gu7_A Enoyl-[acyl-carrier-pro 79.2 2.8 9.4E-05 39.3 6.0 87 3-102 179-274 (364)
393 4ibo_A Gluconate dehydrogenase 79.1 16 0.00054 32.6 10.9 70 2-78 33-111 (271)
394 3i1j_A Oxidoreductase, short c 79.0 17 0.00059 31.4 10.9 71 2-78 21-102 (247)
395 3a10_A Response regulator; pho 78.9 17 0.00058 26.7 10.8 51 19-78 3-53 (116)
396 3v2h_A D-beta-hydroxybutyrate 78.8 16 0.00054 32.8 10.8 71 2-78 32-112 (281)
397 2cf5_A Atccad5, CAD, cinnamyl 78.7 1.4 4.8E-05 41.5 3.7 85 2-102 190-274 (357)
398 3cz5_A Two-component response 78.3 18 0.0006 28.4 9.9 53 18-78 6-59 (153)
399 4eso_A Putative oxidoreductase 78.3 14 0.00048 32.6 10.2 67 2-78 15-90 (255)
400 3tjr_A Short chain dehydrogena 78.2 17 0.00058 32.9 11.0 70 2-78 38-116 (301)
401 3ioy_A Short-chain dehydrogena 78.1 19 0.00066 32.9 11.4 72 2-78 15-95 (319)
402 3kht_A Response regulator; PSI 78.0 22 0.00074 27.4 12.4 54 18-78 6-59 (144)
403 3hdv_A Response regulator; PSI 77.7 21 0.00072 27.1 10.3 54 17-78 7-60 (136)
404 3crn_A Response regulator rece 77.5 21 0.00073 27.1 10.4 52 18-78 4-55 (132)
405 2rjn_A Response regulator rece 77.3 18 0.00062 28.3 9.7 52 18-78 8-59 (154)
406 3oid_A Enoyl-[acyl-carrier-pro 77.1 22 0.00076 31.3 11.2 70 2-78 11-90 (258)
407 3grc_A Sensor protein, kinase; 77.0 17 0.0006 27.8 9.4 53 17-78 6-58 (140)
408 1qkk_A DCTD, C4-dicarboxylate 76.9 20 0.00068 28.1 9.9 78 18-104 4-84 (155)
409 3is3_A 17BETA-hydroxysteroid d 76.7 39 0.0013 29.8 13.3 133 2-152 25-190 (270)
410 3gt7_A Sensor protein; structu 76.7 12 0.00041 29.7 8.5 53 17-78 7-59 (154)
411 3cnb_A DNA-binding response re 76.6 23 0.00078 27.0 11.8 53 18-78 9-62 (143)
412 1h2b_A Alcohol dehydrogenase; 76.4 3.3 0.00011 38.8 5.7 86 2-102 196-284 (359)
413 2zay_A Response regulator rece 76.4 14 0.00049 28.6 8.8 52 18-78 9-60 (147)
414 1dbw_A Transcriptional regulat 76.0 23 0.00077 26.6 10.9 52 18-78 4-55 (126)
415 3nhm_A Response regulator; pro 75.9 23 0.00079 26.7 10.6 51 18-78 5-55 (133)
416 3kcn_A Adenylate cyclase homol 75.8 18 0.00061 28.3 9.3 52 18-78 5-56 (151)
417 3gl9_A Response regulator; bet 75.7 11 0.00038 28.5 7.8 52 18-78 3-54 (122)
418 3hdg_A Uncharacterized protein 75.4 25 0.00084 26.8 11.6 52 18-78 8-59 (137)
419 3ucx_A Short chain dehydrogena 75.3 25 0.00086 30.9 11.1 69 3-78 19-96 (264)
420 3tka_A Ribosomal RNA small sub 75.2 5.3 0.00018 38.1 6.6 77 2-89 66-146 (347)
421 1xhl_A Short-chain dehydrogena 75.1 45 0.0016 30.0 13.0 73 2-78 33-114 (297)
422 4fgs_A Probable dehydrogenase 75.1 4.6 0.00016 37.0 6.1 128 3-152 37-196 (273)
423 2qr3_A Two-component system re 74.9 22 0.00075 27.1 9.4 52 18-78 4-55 (140)
424 3pgx_A Carveol dehydrogenase; 74.5 19 0.00064 32.1 10.0 70 2-78 22-113 (280)
425 1xg5_A ARPG836; short chain de 74.4 45 0.0015 29.3 13.0 72 2-78 39-119 (279)
426 1yqd_A Sinapyl alcohol dehydro 74.3 2.5 8.6E-05 39.8 4.2 86 2-103 197-282 (366)
427 3b2n_A Uncharacterized protein 74.3 26 0.0009 26.6 10.5 54 18-78 4-57 (133)
428 3r0j_A Possible two component 74.3 24 0.00081 30.6 10.5 77 18-104 24-104 (250)
429 1tt7_A YHFP; alcohol dehydroge 74.3 1.6 5.3E-05 40.4 2.7 82 3-101 162-245 (330)
430 3tsc_A Putative oxidoreductase 74.2 23 0.00077 31.4 10.5 69 3-78 19-109 (277)
431 2jah_A Clavulanic acid dehydro 74.2 26 0.0009 30.5 10.8 69 2-77 14-91 (247)
432 3h1g_A Chemotaxis protein CHEY 74.0 26 0.0009 26.5 10.1 54 18-78 6-59 (129)
433 3o38_A Short chain dehydrogena 74.0 25 0.00086 30.8 10.7 66 7-78 35-109 (266)
434 4dry_A 3-oxoacyl-[acyl-carrier 74.0 26 0.00089 31.4 10.9 71 2-78 40-119 (281)
435 2rdm_A Response regulator rece 74.0 26 0.00088 26.3 10.8 53 18-78 6-58 (132)
436 4a27_A Synaptic vesicle membra 73.9 2.6 8.7E-05 39.4 4.1 84 3-102 154-237 (349)
437 3pvc_A TRNA 5-methylaminomethy 73.8 2.9 0.0001 43.0 4.9 55 49-104 149-211 (689)
438 3to5_A CHEY homolog; alpha(5)b 73.7 6.8 0.00023 31.7 6.2 52 19-78 14-65 (134)
439 1yb1_A 17-beta-hydroxysteroid 73.7 47 0.0016 29.2 13.5 70 2-78 38-116 (272)
440 1geg_A Acetoin reductase; SDR 73.7 34 0.0012 29.8 11.4 70 2-78 9-87 (256)
441 2y75_A HTH-type transcriptiona 73.6 3 0.0001 33.2 3.9 56 279-335 27-84 (129)
442 1k66_A Phytochrome response re 73.4 28 0.00097 26.6 11.6 56 18-78 7-70 (149)
443 1srr_A SPO0F, sporulation resp 73.2 26 0.0009 26.1 9.8 52 18-78 4-55 (124)
444 3hv2_A Response regulator/HD d 73.1 31 0.0011 26.9 12.1 52 18-78 15-66 (153)
445 1ylf_A RRF2 family protein; st 72.6 2.9 9.8E-05 34.5 3.7 56 278-335 30-87 (149)
446 3ps9_A TRNA 5-methylaminomethy 72.5 2.5 8.6E-05 43.3 4.0 53 49-101 157-217 (676)
447 3ftp_A 3-oxoacyl-[acyl-carrier 72.4 8.3 0.00028 34.5 7.1 70 2-78 35-113 (270)
448 1yio_A Response regulatory pro 72.4 30 0.001 28.6 10.3 52 18-78 5-56 (208)
449 3cfy_A Putative LUXO repressor 72.2 30 0.001 26.5 9.7 51 19-78 6-56 (137)
450 3ai3_A NADPH-sorbose reductase 72.1 27 0.00092 30.6 10.4 70 2-78 14-93 (263)
451 3sju_A Keto reductase; short-c 72.1 18 0.00061 32.4 9.3 70 2-78 31-109 (279)
452 3oec_A Carveol dehydrogenase ( 71.4 29 0.00099 31.6 10.7 70 2-78 53-143 (317)
453 3lyl_A 3-oxoacyl-(acyl-carrier 71.3 23 0.00078 30.6 9.6 70 2-78 12-90 (247)
454 2bd0_A Sepiapterin reductase; 70.9 37 0.0013 29.1 10.8 71 2-78 9-94 (244)
455 1xq1_A Putative tropinone redu 70.7 52 0.0018 28.5 12.1 69 2-77 21-99 (266)
456 1dz3_A Stage 0 sporulation pro 70.7 31 0.0011 25.9 10.0 52 19-78 4-56 (130)
457 2qvg_A Two component response 70.5 26 0.00087 26.8 8.9 56 18-78 8-67 (143)
458 4fs3_A Enoyl-[acyl-carrier-pro 70.4 16 0.00055 32.3 8.5 123 10-151 27-182 (256)
459 1zgz_A Torcad operon transcrip 70.3 28 0.00096 25.7 8.9 52 18-78 3-54 (122)
460 2py6_A Methyltransferase FKBM; 70.3 7.5 0.00026 37.5 6.6 38 2-39 235-274 (409)
461 2heo_A Z-DNA binding protein 1 69.9 4.8 0.00016 28.6 3.9 45 259-309 12-56 (67)
462 3rih_A Short chain dehydrogena 69.8 18 0.00061 32.8 8.8 71 2-78 48-127 (293)
463 3k69_A Putative transcription 69.8 4.8 0.00017 33.8 4.5 58 278-336 28-87 (162)
464 3lkz_A Non-structural protein 69.8 3 0.0001 39.2 3.4 91 2-115 103-211 (321)
465 4fn4_A Short chain dehydrogena 69.7 22 0.00077 31.9 9.3 125 10-154 26-182 (254)
466 2b4a_A BH3024; flavodoxin-like 69.6 35 0.0012 26.0 9.5 54 17-78 15-68 (138)
467 3kto_A Response regulator rece 69.4 12 0.00041 28.8 6.6 52 18-78 7-58 (136)
468 4imr_A 3-oxoacyl-(acyl-carrier 69.3 20 0.0007 32.0 9.0 69 2-78 40-117 (275)
469 3f6p_A Transcriptional regulat 69.3 33 0.0011 25.6 10.6 52 18-78 3-54 (120)
470 3n74_A 3-ketoacyl-(acyl-carrie 69.2 38 0.0013 29.4 10.6 66 3-78 17-91 (261)
471 2a4k_A 3-oxoacyl-[acyl carrier 69.0 60 0.0021 28.5 12.5 128 2-152 13-172 (263)
472 1xhf_A DYE resistance, aerobic 68.9 32 0.0011 25.4 10.0 52 18-78 4-55 (123)
473 1k68_A Phytochrome response re 68.8 34 0.0012 25.7 13.0 56 18-78 3-63 (140)
474 3mm4_A Histidine kinase homolo 68.8 14 0.00048 31.3 7.4 55 18-78 62-127 (206)
475 1kgs_A DRRD, DNA binding respo 68.6 42 0.0014 28.0 10.5 51 19-78 4-54 (225)
476 1s8n_A Putative antiterminator 68.5 49 0.0017 27.3 10.9 78 18-104 14-94 (205)
477 3l6e_A Oxidoreductase, short-c 68.4 42 0.0014 28.9 10.7 67 2-78 10-85 (235)
478 3imf_A Short chain dehydrogena 68.2 35 0.0012 29.8 10.2 70 2-78 13-91 (257)
479 2eez_A Alanine dehydrogenase; 68.0 16 0.00055 34.5 8.3 88 3-104 173-267 (369)
480 1zsy_A Mitochondrial 2-enoyl t 67.9 4.9 0.00017 37.6 4.6 86 3-102 179-269 (357)
481 1xn7_A Hypothetical protein YH 67.7 4.2 0.00014 30.2 3.2 46 259-312 4-49 (78)
482 4egf_A L-xylulose reductase; s 67.4 38 0.0013 29.8 10.4 70 2-78 27-106 (266)
483 3gvc_A Oxidoreductase, probabl 67.3 28 0.00096 31.1 9.5 67 2-78 36-111 (277)
484 1pjc_A Protein (L-alanine dehy 67.1 15 0.00051 34.6 7.9 90 3-106 177-270 (361)
485 4iin_A 3-ketoacyl-acyl carrier 67.1 22 0.00075 31.4 8.7 70 2-78 36-115 (271)
486 3f1l_A Uncharacterized oxidore 67.1 41 0.0014 29.3 10.4 71 2-78 19-100 (252)
487 2z1n_A Dehydrogenase; reductas 67.1 60 0.0021 28.2 11.5 71 2-78 14-93 (260)
488 4dyv_A Short-chain dehydrogena 66.7 44 0.0015 29.7 10.7 67 2-78 35-110 (272)
489 1i3c_A Response regulator RCP1 66.6 21 0.0007 28.0 7.6 56 18-78 9-69 (149)
490 3lua_A Response regulator rece 66.4 16 0.00054 28.1 6.8 53 18-78 5-58 (140)
491 3n53_A Response regulator rece 65.9 39 0.0014 25.7 9.1 51 18-78 4-54 (140)
492 3tox_A Short chain dehydrogena 65.9 33 0.0011 30.7 9.7 70 2-78 15-93 (280)
493 4dad_A Putative pilus assembly 65.9 12 0.00042 29.0 6.1 54 17-78 20-75 (146)
494 3cxt_A Dehydrogenase with diff 65.6 49 0.0017 29.7 10.9 70 2-78 41-119 (291)
495 1gee_A Glucose 1-dehydrogenase 65.5 66 0.0023 27.7 11.6 70 2-78 14-93 (261)
496 3lte_A Response regulator; str 65.5 20 0.00069 27.0 7.2 52 18-78 7-58 (132)
497 3kyj_B CHEY6 protein, putative 65.5 15 0.00052 28.5 6.5 78 18-103 14-95 (145)
498 3t8r_A Staphylococcus aureus C 65.1 6.4 0.00022 32.2 4.2 57 278-335 28-86 (143)
499 3guy_A Short-chain dehydrogena 64.8 37 0.0013 28.9 9.5 35 2-37 8-45 (230)
500 3ek2_A Enoyl-(acyl-carrier-pro 64.7 61 0.0021 28.1 11.1 130 5-154 26-192 (271)
No 1
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=100.00 E-value=7.8e-78 Score=593.22 Aligned_cols=315 Identities=25% Similarity=0.439 Sum_probs=286.3
Q ss_pred CccccHhHHHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCcc-EEEEeccHHHHHH-HhhhcCCcccEEEeC
Q 019408 1 MCGCGIRSLRYLAE-AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKR-WVVTHFDANRVLS-ECYLKREFFDLIDID 77 (341)
Q Consensus 1 fagsG~rgir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~-~~v~~~DA~~~l~-~~~~~~~~fDvIdlD 77 (341)
|||||++||++|++ +||.+|++||+|+.|++.+++|+++|+++ ++ ++++++||+++|. .. +++||+|++|
T Consensus 60 faGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~----~~~v~v~~~Da~~~l~~~~---~~~fD~V~lD 132 (392)
T 3axs_A 60 LSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP----EDRYEIHGMEANFFLRKEW---GFGFDYVDLD 132 (392)
T ss_dssp SCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC----GGGEEEECSCHHHHHHSCC---SSCEEEEEEC
T ss_pred CCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC----CceEEEEeCCHHHHHHHhh---CCCCcEEEEC
Confidence 79999999999997 57899999999999999999999999985 45 8999999999987 54 3579999999
Q ss_pred CCCCCHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhcCCcEEEE
Q 019408 78 SFGSDSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPL 157 (341)
Q Consensus 78 Pygsp~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i~Pl 157 (341)
|||++.+|++.|+++|++||+|++|+||+++|||+.+..++|+||..|.+.+++||.++|++|..++++|+++++.|+|+
T Consensus 133 P~g~~~~~l~~a~~~Lk~gGll~~t~t~~~~l~g~~~~~~~rkYg~~p~r~~~~~e~~~r~~L~~~~~~a~~~~~~i~P~ 212 (392)
T 3axs_A 133 PFGTPVPFIESVALSMKRGGILSLTATDTAPLSGTYPKTCMRRYMARPLRNEFKHEVGIRILIKKVIELAAQYDIAMIPI 212 (392)
T ss_dssp CSSCCHHHHHHHHHHEEEEEEEEEEECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCcCHHHHHHHHHHHhCCCCEEEEEecchhhhccccHHHHHHHhCCcccccccccchhHHHHHHHHHHhcccCCCeEEee
Confidence 99998899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCeEEEEEEEEeCccc---ccccceeEEEcCCCCCcccccccccCCCCC-CCCCCCCCCcceeeccccccCCC
Q 019408 158 FSYYSYHGPVFRVMLRVHRKALP---DNRHYGFISYCNHCGNSQAYSWEELGQMSC-PCSNTIGSSSLVVSGPLWTGPLH 233 (341)
Q Consensus 158 ~s~~~~~dhy~Rv~vrv~~~~~~---~~~~~g~v~~C~~C~~~~~~~~~~~~~~~C-~c~~~~~~~~~~~~GPlW~G~lh 233 (341)
++++ .|||+||||||.+|+.+ +.+++||++||++|++++.+.........| .|++ +++++||||+||||
T Consensus 213 l~~~--~~~y~Rv~vrv~~~~~~~~~~~~~~g~v~~C~~C~~~~~~~~~~~~~~~C~~cg~-----~~~~~GPlW~g~l~ 285 (392)
T 3axs_A 213 FAYS--HLHYFKLFFVKERGVEKVDKLIEQFGYIQYCFNCMNREVVTDLYKFKEKCPHCGS-----KFHIGGPLWIGKLW 285 (392)
T ss_dssp EEEE--ETTEEEEEEEEEECHHHHHHHHTTEEEEEECTTTCCEEEECCGGGCCSBCTTTCS-----BCEEEEEEECSCSC
T ss_pred EEEE--eCcEEEEEEEEecCHHHHHHHHHhcceEEECCCCCCeEeecCCCCCCCcCCCCCC-----ccceecccccCcCC
Confidence 9999 99999999999999876 467899999999999998743111123567 4655 99999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHhhcccCCCCCCc-ceehhHHHhhcCCCCC-CHHHHHHHHHHCCCEEee
Q 019408 234 DATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFG-YIKLDEMASRAKMNSP-SLKTMMSAVQKEGYVASR 311 (341)
Q Consensus 234 d~~fv~~~l~~~~~~~~~~~~~~~~~~~ll~~~~~e~~~~~pp~-yy~~~~l~~~~k~~~p-~~~~~~~~L~~~Gy~as~ 311 (341)
|++||++|++.+++..|.+ .++.+||+.+.+|. +.|++ ||++|+||+++|+++| |+++++ +||+|||
T Consensus 286 d~~fv~~~l~~~~~~~~~~----~~~~~lL~~~~~E~--~~p~~~~y~~~~l~~~~~~~~p~~~~~~~-----~Gy~~s~ 354 (392)
T 3axs_A 286 DEEFTNFLYEEAQKREEIE----KETKRILKLIKEES--QLQTVGFYVLSKLAEKVKLPAQPPIRIAV-----KFFNGVR 354 (392)
T ss_dssp CHHHHHHHHHHHHTCTTSC----HHHHHHHHHHHHHH--TSCCSSCEEHHHHHHHHTCSCCCCHHHHH-----HHTTCEE
T ss_pred CHHHHHHHHHHhhhcccch----HHHHHHHHHHHHHh--cCCccceEcHHHHHHHcCCCCCCCHHHHh-----cCcEEEe
Confidence 9999999999998776643 57999999999885 45522 9999999999999999 999988 9999999
Q ss_pred eecCCCceecCCCHHHHHHHHHhhhhhcc
Q 019408 312 SHIASNAIKTNCPMVACIRIAKELQGCQK 340 (341)
Q Consensus 312 tH~~~~~iKTdAp~~~i~~i~~~~~~~~~ 340 (341)
||++|+|||||||+++||+|+++|...|+
T Consensus 355 tH~~p~~iKTdAp~~~i~~i~~~~~~~~~ 383 (392)
T 3axs_A 355 THFVGDGFRTNLSFEEVMKKMEELKEKQK 383 (392)
T ss_dssp CTTSTTEEECSSCHHHHHHHHHHHHHHHH
T ss_pred eccCCCcEeccCCHHHHHHHHHHHHHhch
Confidence 99999999999999999999999987665
No 2
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=100.00 E-value=1.3e-71 Score=547.30 Aligned_cols=306 Identities=28% Similarity=0.470 Sum_probs=278.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc---------------CCCCCCCccEEEEeccHHHHHHHhh
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI---------------ERGSGDEKRWVVTHFDANRVLSECY 65 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n---------------~~~~~~~~~~~v~~~DA~~~l~~~~ 65 (341)
|||||++||+++++.++.+|++||+|++|++++++|+++| +++ .++++++|+++++...
T Consensus 55 ~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-----~i~v~~~Da~~~~~~~- 128 (378)
T 2dul_A 55 LSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-----TIVINHDDANRLMAER- 128 (378)
T ss_dssp SCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-----EEEEEESCHHHHHHHS-
T ss_pred CCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-----ceEEEcCcHHHHHHhc-
Confidence 6999999999999757778999999999999999999999 773 4889999999998754
Q ss_pred hcCCcccEEEeCCCCCCHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHH
Q 019408 66 LKREFFDLIDIDSFGSDSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVR 145 (341)
Q Consensus 66 ~~~~~fDvIdlDPygsp~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~ 145 (341)
.++||+|++|||+++.+|++.|++.+++||+|++|+||.+++|+.++..++++||..|.+.+++||.++|+++..+++
T Consensus 129 --~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~td~~~l~~~~~~~~~~~yg~~p~~~~~~~e~~~ri~l~~~~~ 206 (378)
T 2dul_A 129 --HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIAR 206 (378)
T ss_dssp --TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHH
T ss_pred --cCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEeecchhhccccHHHHHHHccCCCcccccccchhHHHHHHHHHH
Confidence 347999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEEecccCCCCeEEEEEEEEeCccc---ccccceeEEEcCCCCCcccccccccCCCCCCCCCCCCCCcce
Q 019408 146 EASAQGYHVSPLFSYYSYHGPVFRVMLRVHRKALP---DNRHYGFISYCNHCGNSQAYSWEELGQMSCPCSNTIGSSSLV 222 (341)
Q Consensus 146 ~Aa~~~~~i~Pl~s~~~~~dhy~Rv~vrv~~~~~~---~~~~~g~v~~C~~C~~~~~~~~~~~~~~~C~c~~~~~~~~~~ 222 (341)
.|+++++.|.|+++++ .+||+|+++||.+|+.. +.+++||++||++|++++.++ +. .+.|.. .
T Consensus 207 ~~~~~g~~i~P~~~~~--~~~y~rv~vrv~~g~~~~~~~~~~~g~v~~C~~c~~~~~~~--~~---~~~~~~-----~-- 272 (378)
T 2dul_A 207 YAAKYDLGIDVILAYY--KDHYFRAFVKLKDGARKGDETLEKLGYIYFDDKTGKFELEQ--GF---LPTRPN-----A-- 272 (378)
T ss_dssp HHHTTTEEEEEEEEEE--ETTEEEEEEEEEESHHHHHHHHTTEEEEEECTTTCCEEEEE--SS---SCCSSS-----C--
T ss_pred hcCcCCcEEEEEEEEe--cCCEEEEEEEEecCHHHHHHHHHhcceEEECCCCCCEEeec--cc---CCCCCC-----C--
Confidence 9999999999999999 99999999999999876 457899999999999999875 11 222332 2
Q ss_pred eeccccccCCCCHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHhhcccCCCCCCcceehhHHHhhcCCCCCCHHHHHHHH
Q 019408 223 VSGPLWTGPLHDATHITKMLNLAEKWGWVGDGTGTDLEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAV 302 (341)
Q Consensus 223 ~~GPlW~G~lhd~~fv~~~l~~~~~~~~~~~~~~~~~~~ll~~~~~e~~~~~pp~yy~~~~l~~~~k~~~p~~~~~~~~L 302 (341)
+||||+|||||++||++|++.+++..|. +..|+.+||+.+.+| .+. |+||++|+||+++|+++||+++|+++|
T Consensus 273 -~GPlw~g~l~d~~f~~~~l~~~~~~~~~---~~~~~~~ll~~~~~E--~~~-p~~y~~~~~~~~~~~~~p~~~~~~~~L 345 (378)
T 2dul_A 273 -YGPVWLGPLKDEKIVSKMVKEAESLSLA---RKKQALKLLKMIDQE--LDI-PLFYDTHAIGRRLKIETKKVEEIISAL 345 (378)
T ss_dssp -EEEEECSCSBCHHHHHHHHHHHHTSCCT---THHHHHHHHHHHHHS--CCS-SCCEEHHHHHHHHTCCBCCHHHHHHHH
T ss_pred -cCCCccCCCCCHHHHHHHHHHhhhcccc---hHHHHHHHHHHHHHh--cCC-CcEEeHHHHHHHcCCCCCCHHHHHHHH
Confidence 9999999999999999999998777664 345799999999988 445 579999999999999999999999999
Q ss_pred HHCCCEEeeeecCCCceecCCCHHHHHHHHHhh
Q 019408 303 QKEGYVASRSHIASNAIKTNCPMVACIRIAKEL 335 (341)
Q Consensus 303 ~~~Gy~as~tH~~~~~iKTdAp~~~i~~i~~~~ 335 (341)
+++||+||||||+|+|||||||+++||+|+|++
T Consensus 346 ~~~Gy~~s~tH~~p~~ikTdAp~~~i~~i~~~~ 378 (378)
T 2dul_A 346 REQGYEATRTHFSPTGIKTSAPYEVFIETIKRI 378 (378)
T ss_dssp HHTTCCEEEETTEEEEEEESSCHHHHHHHHBC-
T ss_pred HHCCCEEEeeecCCCcEecCCCHHHHHHHHhhC
Confidence 999999999999999999999999999999863
No 3
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.59 E-value=1.9e-15 Score=142.26 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=82.8
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
|||+|.+||.+|+ .|+.+|+++|+||.|++.+++|+++|+++ ++++++++|+++++. ...||.|++||..
T Consensus 133 ~aG~G~~~i~~a~-~g~~~V~avD~np~a~~~~~~N~~~N~v~----~~v~~~~~D~~~~~~-----~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 133 FAGIGHLSLPIAV-YGKAKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDFPG-----ENIADRILMGYVV 202 (278)
T ss_dssp TCTTTTTTHHHHH-HTCCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTCCC-----CSCEEEEEECCCS
T ss_pred cCcCcHHHHHHHH-hcCCeEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEeCcHHHhcc-----ccCCCEEEECCCC
Confidence 7999999999999 58889999999999999999999999995 679999999987643 3579999999855
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
++.+|++.|++++++||+|.+..
T Consensus 203 ~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 203 RTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHcCCCCEEEEEe
Confidence 56799999999999999998643
No 4
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.58 E-value=1.3e-14 Score=142.25 Aligned_cols=135 Identities=11% Similarity=0.027 Sum_probs=108.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCc-cEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEK-RWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~-~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
+||||.+++.+|+ .|+.+|+++|+|+.+++.+++|++.|++. . +++++++|+.+++......+.+||+|++||
T Consensus 220 ~cGtG~~sl~la~-~ga~~V~~vD~s~~al~~A~~N~~~n~~~----~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP 294 (385)
T 2b78_A 220 FSYTAAFSVAAAM-GGAMATTSVDLAKRSRALSLAHFEANHLD----MANHQLVVMDVFDYFKYARRHHLTYDIIIIDPP 294 (385)
T ss_dssp TCTTTHHHHHHHH-TTBSEEEEEESCTTHHHHHHHHHHHTTCC----CTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred eeccCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHHhCCCccEEEECCC
Confidence 6999999999998 68889999999999999999999999984 3 689999999999876544456899999999
Q ss_pred C-CC----C-------HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHH
Q 019408 79 F-GS----D-------SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVRE 146 (341)
Q Consensus 79 y-gs----p-------~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~ 146 (341)
+ +. . ..++..+.+.|++||+|++++ |.. .+....+...+..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~------~~~--------------------~~~~~~~~~~i~~~ 348 (385)
T 2b78_A 295 SFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST------NAA--------------------NMTVSQFKKQIEKG 348 (385)
T ss_dssp CC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE------CCT--------------------TSCHHHHHHHHHHH
T ss_pred CCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe------CCC--------------------cCCHHHHHHHHHHH
Confidence 3 21 1 124557789999999999854 322 24556788888888
Q ss_pred HHhcCCcEEEEEecccCCCCeE
Q 019408 147 ASAQGYHVSPLFSYYSYHGPVF 168 (341)
Q Consensus 147 Aa~~~~~i~Pl~s~~~~~dhy~ 168 (341)
+.+.++. .+-...||.||++
T Consensus 349 ~~~~g~~--~~~~~~~~~D~p~ 368 (385)
T 2b78_A 349 FGKQKHT--YLDLQQLPSDFAV 368 (385)
T ss_dssp HTTCCCE--EEEEECCCTTSCC
T ss_pred HHHcCCc--EEEeCCCCCCCCC
Confidence 9899888 5666777799986
No 5
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.55 E-value=3.4e-14 Score=139.76 Aligned_cols=132 Identities=18% Similarity=0.151 Sum_probs=108.6
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
|||||.+++.+|. .|+. |+++|+|+.+++.+++|++.|++. . ++.++|+++++... .+. ||+|++||
T Consensus 222 g~GtG~~sl~~a~-~ga~-V~avDis~~al~~a~~n~~~ng~~----~--~~~~~D~~~~l~~~--~~~-fD~Ii~dpP~ 290 (393)
T 4dmg_A 222 YSYVGGFALRAAR-KGAY-ALAVDKDLEALGVLDQAALRLGLR----V--DIRHGEALPTLRGL--EGP-FHHVLLDPPT 290 (393)
T ss_dssp SCTTTHHHHHHHH-TTCE-EEEEESCHHHHHHHHHHHHHHTCC----C--EEEESCHHHHHHTC--CCC-EEEEEECCCC
T ss_pred ccchhHHHHHHHH-cCCe-EEEEECCHHHHHHHHHHHHHhCCC----C--cEEEccHHHHHHHh--cCC-CCEEEECCCc
Confidence 6999999999998 5887 999999999999999999999984 2 45699999998754 234 99999999
Q ss_pred CCCC-----------HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHH
Q 019408 79 FGSD-----------SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147 (341)
Q Consensus 79 ygsp-----------~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~A 147 (341)
|... ..++..+++.|++||+|.+ +| |... +....+...+.+++
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~-~s-----~s~~--------------------~~~~~f~~~v~~a~ 344 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWL-SS-----CSYH--------------------LRLEDLLEVARRAA 344 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEE-EE-----CCTT--------------------SCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE-EE-----CCCC--------------------CCHHHHHHHHHHHH
Confidence 2210 2677889999999999985 44 5332 44556888889999
Q ss_pred HhcCCcEEEEEecccCCCCeEE
Q 019408 148 SAQGYHVSPLFSYYSYHGPVFR 169 (341)
Q Consensus 148 a~~~~~i~Pl~s~~~~~dhy~R 169 (341)
.+.++.++.+-...|+.||++.
T Consensus 345 ~~~g~~~~i~~~~~~~~DhP~~ 366 (393)
T 4dmg_A 345 ADLGRRLRVHRVTYQPEDHPWS 366 (393)
T ss_dssp HHHTCCEEEEEEEECCTTSCEE
T ss_pred HHhCCeEEEEEEcCCCCCCCcC
Confidence 9999999999999999999864
No 6
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.54 E-value=7.6e-14 Score=136.82 Aligned_cols=138 Identities=13% Similarity=0.033 Sum_probs=112.9
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCC-CCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIER-GSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~-~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
+||+|.+++.+++ .|+.+|+++|+|+.+++.+++|++.|++ . ++++++++|+.+++......+.+||+|++||
T Consensus 228 ~cG~G~~sl~la~-~g~~~V~~vD~s~~al~~a~~n~~~ngl~~----~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP 302 (396)
T 3c0k_A 228 FSYTGGFAVSALM-GGCSQVVSVDTSQEALDIARQNVELNKLDL----SKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPP 302 (396)
T ss_dssp SCTTCSHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCG----GGEEEEESCHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eccCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCc----cceEEEECCHHHHHHHHHhcCCCCCEEEECCC
Confidence 6999999999998 5888999999999999999999999987 4 4789999999999876544456899999999
Q ss_pred C-CC-----------CHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHH
Q 019408 79 F-GS-----------DSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVRE 146 (341)
Q Consensus 79 y-gs-----------p~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~ 146 (341)
+ +. ...++..+++.+++||+|++++ |... +....+...+.++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~------~~~~--------------------~~~~~~~~~i~~~ 356 (396)
T 3c0k_A 303 KFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS------CSGL--------------------MTSDLFQKIIADA 356 (396)
T ss_dssp STTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE------CCTT--------------------CCHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe------CCCc--------------------CCHHHHHHHHHHH
Confidence 3 21 1356778999999999999844 4321 3334567778888
Q ss_pred HHhcCCcEEEEEecccCCCCeEE
Q 019408 147 ASAQGYHVSPLFSYYSYHGPVFR 169 (341)
Q Consensus 147 Aa~~~~~i~Pl~s~~~~~dhy~R 169 (341)
+.+.|+.++.+-...++.||++.
T Consensus 357 ~~~~g~~~~~i~~~~~~~d~p~~ 379 (396)
T 3c0k_A 357 AIDAGRDVQFIEQFRQAADHPVI 379 (396)
T ss_dssp HHHHTCCEEEEEEEECCTTSCEE
T ss_pred HHHcCCeEEEEEECCCCCCCCCC
Confidence 99999999999888888998753
No 7
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.49 E-value=1.6e-13 Score=134.37 Aligned_cols=137 Identities=19% Similarity=0.087 Sum_probs=109.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
+||+|.+++.++. .|+.+|+++|+|+.+++.+++|++.|++. .+++++++|+.+++......+.+||+|++||
T Consensus 225 ~~G~G~~~~~la~-~g~~~v~~vD~s~~~l~~a~~n~~~n~~~----~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~ 299 (396)
T 2as0_A 225 FTYTGGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVE----DRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPA 299 (396)
T ss_dssp TCTTTHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cCCCCHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEECCHHHHHHHHHhhCCCCCEEEECCCC
Confidence 6999999999998 58889999999999999999999999983 3789999999998876544456899999999
Q ss_pred CCC-----------CHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHH
Q 019408 79 FGS-----------DSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147 (341)
Q Consensus 79 ygs-----------p~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~A 147 (341)
|+. ...++..+++.|++||+|++++ |... +....+...+.+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~------~~~~--------------------~~~~~~~~~v~~~~ 353 (396)
T 2as0_A 300 FVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS------CSQH--------------------VDLQMFKDMIIAAG 353 (396)
T ss_dssp SCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE------CCTT--------------------SCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE------CCCC--------------------CCHHHHHHHHHHHH
Confidence 332 1246678899999999988643 4321 33445667777888
Q ss_pred HhcCCcEEEEE-ecccCCCCeE
Q 019408 148 SAQGYHVSPLF-SYYSYHGPVF 168 (341)
Q Consensus 148 a~~~~~i~Pl~-s~~~~~dhy~ 168 (341)
.+.++.++.+- ...|+.||++
T Consensus 354 ~~~~~~~~~i~~~~~~~~d~p~ 375 (396)
T 2as0_A 354 AKAGKFLKMLEPYRTQAPDHPI 375 (396)
T ss_dssp HHTTEEEEESSCBBCSCTTSCC
T ss_pred HHcCCeEEEEeccCCCCCCCCc
Confidence 88999898887 7777777764
No 8
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.47 E-value=3e-13 Score=130.06 Aligned_cols=124 Identities=16% Similarity=0.037 Sum_probs=100.1
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCc-cEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEK-RWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~-~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
+||||.+++.+++ .|+ +|+++|+|+.+++.+++|++.|++. + +++++++|+++++......+++||+|++||
T Consensus 161 gcGtG~~sl~la~-~ga-~V~~VD~s~~al~~a~~n~~~~gl~----~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP 234 (332)
T 2igt_A 161 FGYTGVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLE----QAPIRWICEDAMKFIQREERRGSTYDIILTDPP 234 (332)
T ss_dssp TCTTCHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCT----TSCEEEECSCHHHHHHHHHHHTCCBSEEEECCC
T ss_pred ccccCHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECcHHHHHHHHHhcCCCceEEEECCc
Confidence 6999999999998 688 9999999999999999999999984 3 488999999999865433356899999999
Q ss_pred -CCCC------------HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHH
Q 019408 79 -FGSD------------SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVR 145 (341)
Q Consensus 79 -ygsp------------~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~ 145 (341)
|+.. ..++..+.+.|++||+|.++++ |.. .+....+...+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~-----~~~--------------------~~~~~~~~~~l~~ 289 (332)
T 2igt_A 235 KFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA-----YSI--------------------RASFYSMHELMRE 289 (332)
T ss_dssp SEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE-----CCT--------------------TSCHHHHHHHHHH
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC-----CCC--------------------CCCHHHHHHHHHH
Confidence 3421 3667888999999999888776 432 1344567777788
Q ss_pred HHHhcCCcEE
Q 019408 146 EASAQGYHVS 155 (341)
Q Consensus 146 ~Aa~~~~~i~ 155 (341)
++.+.|+.++
T Consensus 290 a~~~~g~~v~ 299 (332)
T 2igt_A 290 TMRGAGGVVA 299 (332)
T ss_dssp HTTTSCSEEE
T ss_pred HHHHcCCeEE
Confidence 8888888776
No 9
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.46 E-value=5.8e-13 Score=130.01 Aligned_cols=135 Identities=17% Similarity=0.086 Sum_probs=110.8
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
+||+|.+++.++.. +.+|+++|+|+.+++.+++|++.|++. .++++++|+.+++......+.+||+|++||
T Consensus 217 g~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~-----~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 217 FSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLG-----NVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp TCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCT-----TEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred eeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCC-----CceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 68999999999984 678999999999999999999999984 488999999999876544456899999999
Q ss_pred CCCC-----------HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHH
Q 019408 79 FGSD-----------SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREA 147 (341)
Q Consensus 79 ygsp-----------~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~A 147 (341)
|+.. ..++..+++.|++||+|++++ |... +....+...+.+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~------~~~~--------------------~~~~~~~~~i~~~~ 343 (382)
T 1wxx_A 290 FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS------CSHH--------------------MTEPLFYAMVAEAA 343 (382)
T ss_dssp SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE------CCTT--------------------SCHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE------CCCC--------------------CCHHHHHHHHHHHH
Confidence 4421 246778999999999999744 4321 33445677788889
Q ss_pred HhcCCcEEEEEecccCCCCeE
Q 019408 148 SAQGYHVSPLFSYYSYHGPVF 168 (341)
Q Consensus 148 a~~~~~i~Pl~s~~~~~dhy~ 168 (341)
.+.++.++.+-...++.||++
T Consensus 344 ~~~g~~~~~i~~~~~~~d~p~ 364 (382)
T 1wxx_A 344 QDAHRLLRVVEKRGQPFDHPV 364 (382)
T ss_dssp HHTTCCEEEEEEECCCTTSCC
T ss_pred HHcCCeEEEEEcCCCCCCCCC
Confidence 999999999998888898875
No 10
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.40 E-value=7.6e-13 Score=123.70 Aligned_cols=139 Identities=17% Similarity=0.136 Sum_probs=107.7
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
+||||.+++.+++ .|+.+|+++|+|+.+++.+++|++.|++. ++++++++|+.+++. ...||+|++||..
T Consensus 133 gcG~G~~~~~la~-~~~~~V~~vD~s~~~~~~a~~n~~~n~~~----~~v~~~~~D~~~~~~-----~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 133 FAGIGHLSLPIAV-YGKAKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDFPG-----ENIADRILMGYVV 202 (278)
T ss_dssp TCTTTTTHHHHHH-HTCCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTCCC-----CSCEEEEEECCCS
T ss_pred cccCCHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECCHHHhcc-----cCCccEEEECCch
Confidence 6899999999998 57779999999999999999999999984 468899999987654 4689999999954
Q ss_pred CCHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhcCCcEEE----
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSP---- 156 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i~P---- 156 (341)
....+++.+.+.|++||+|.+.. |+... ......+..+.+.+.+.|+.++.
T Consensus 203 ~~~~~l~~~~~~LkpgG~l~~~~------~~~~~-------------------~~~~~~~~~i~~~~~~~G~~~~~~~~~ 257 (278)
T 2frn_A 203 RTHEFIPKALSIAKDGAIIHYHN------TVPEK-------------------LMPREPFETFKRITKEYGYDVEKLNEL 257 (278)
T ss_dssp SGGGGHHHHHHHEEEEEEEEEEE------EEEGG-------------------GTTTTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred hHHHHHHHHHHHCCCCeEEEEEE------eeccc-------------------cccccHHHHHHHHHHHcCCeeEEeeeE
Confidence 45689999999999999999844 22100 00012345667888999999988
Q ss_pred -EEecccCCCCeEEEEEEEE
Q 019408 157 -LFSYYSYHGPVFRVMLRVH 175 (341)
Q Consensus 157 -l~s~~~~~dhy~Rv~vrv~ 175 (341)
+-++++..+|++ +-++|.
T Consensus 258 ~v~~~~p~~~h~~-~d~~v~ 276 (278)
T 2frn_A 258 KIKRYAPGVWHVV-LDLRVF 276 (278)
T ss_dssp EEEEETTTEEEEE-EEEEEE
T ss_pred EEEecCCCceEEE-EEEEEe
Confidence 778886666664 344443
No 11
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.31 E-value=1.6e-11 Score=107.08 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=90.6
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||||..++.+++ .|+.+|+++|+|+.+++.+++|++.+++ .+++++++|+.+++... ..+.||+|++|| |
T Consensus 52 gcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~--~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 52 YAGSGALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGL-----SGATLRRGAVAAVVAAG--TTSPVDLVLADPPY 123 (189)
T ss_dssp TCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTC-----SCEEEEESCHHHHHHHC--CSSCCSEEEECCCT
T ss_pred CCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEccHHHHHhhc--cCCCccEEEECCCC
Confidence 4899999999887 6888999999999999999999999987 36889999999987643 246899999998 7
Q ss_pred CCC----HHHHHHHHH--hcccCCEEEEEecCCC---CCCCCCchhHHhhhcccc
Q 019408 80 GSD----SSFLRTVFN--AVKRDGLLYLTSTDGY---SSGGHRPNNSLASYGAYI 125 (341)
Q Consensus 80 gsp----~~fld~al~--~v~~gGlL~vt~TD~~---~l~g~~~~~~~r~Yg~~~ 125 (341)
... .+++....+ .|++||+|++...... .+.+.......++||.+.
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~yg~~~ 178 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTR 178 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSCCCCCCTTEEECCCEEETTEE
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCCCccCCCceEEEEEcccCcEE
Confidence 763 244555566 8999999998654322 233444455667787653
No 12
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=3.4e-11 Score=126.49 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=80.8
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
|||||.+++.+++ .|+.+|+++|+|+.+++.+++|+++|++. .++++++++|+++++... +++||+|++||
T Consensus 547 g~GtG~~sl~aa~-~ga~~V~aVD~s~~al~~a~~N~~~ngl~---~~~v~~i~~D~~~~l~~~---~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 547 FSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAERNLRLNGLT---GRAHRLIQADCLAWLREA---NEQFDLIFIDPPT 619 (703)
T ss_dssp SCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCC---STTEEEEESCHHHHHHHC---CCCEEEEEECCCS
T ss_pred eechhHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEEecCHHHHHHhc---CCCccEEEECCcc
Confidence 6999999999998 69999999999999999999999999983 236899999999988753 46899999999
Q ss_pred CCCC-------------HHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSD-------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp-------------~~fld~al~~v~~gGlL~vt~ 103 (341)
|+.. ..++..+.+.|++||+|++.+
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4311 134678899999999999744
No 13
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=99.20 E-value=1.6e-11 Score=115.31 Aligned_cols=91 Identities=19% Similarity=0.106 Sum_probs=74.4
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
|+|||.+|+|+++ ++++++++|.++.+++.|++|++.. .+++|++.|+++.|..+...+++||+|++|| |
T Consensus 99 faGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~-------~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 99 YPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFN-------KKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp EECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTT-------SCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred eCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcC-------CcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 7999999999998 4499999999999999999999741 4789999999999987766667899999999 9
Q ss_pred CCCHHHHHHHHHh------cccCCEEEE
Q 019408 80 GSDSSFLRTVFNA------VKRDGLLYL 101 (341)
Q Consensus 80 gsp~~fld~al~~------v~~gGlL~v 101 (341)
+.. ...+.+++. +.++|++.|
T Consensus 170 e~k-~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 170 ERK-EEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CST-THHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCC-cHHHHHHHHHHHhCccCCCeEEEE
Confidence 853 344444433 446888887
No 14
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=9.1e-11 Score=109.27 Aligned_cols=94 Identities=18% Similarity=0.223 Sum_probs=80.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
+||+|.+++.+++..++.+|+++|+|+.+++.+++|++.|++. +++++++|+.++ .. ...||+|++||..
T Consensus 127 gcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-----~~~~~~~d~~~~-~~----~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 127 FAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-----NVIPILADNRDV-EL----KDVADRVIMGYVH 196 (272)
T ss_dssp TCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-----SEEEEESCGGGC-CC----TTCEEEEEECCCS
T ss_pred cCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEECChHHc-Cc----cCCceEEEECCcc
Confidence 5899999999998545679999999999999999999999984 577999999875 22 4579999999943
Q ss_pred CCHHHHHHHHHhcccCCEEEEEec
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~T 104 (341)
....+++.+++.+++||+|++++.
T Consensus 197 ~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 197 KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 456899999999999999998664
No 15
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.16 E-value=4.4e-11 Score=106.10 Aligned_cols=120 Identities=15% Similarity=0.174 Sum_probs=88.9
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCc-ccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREF-FDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~-fDvIdlDP- 78 (341)
.||||..++.+++ .|+.+|+++|+|+.+++.+++|++.+++. ..+++++++|+.+++... ..+. ||+|++||
T Consensus 61 GcGtG~~~~~~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~v~~~~~d~~~~~~~~--~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 61 FAGSGSLGFEALS-RQAKKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQSSLDFLKQP--QNQPHFDVVFLDPP 134 (201)
T ss_dssp TCTTCHHHHHHHH-TTCSEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECSCHHHHTTSC--CSSCCEEEEEECCC
T ss_pred CCccCHHHHHHHH-ccCCEEEEEECCHHHHHHHHHHHHHhCCC---ccceEEEECCHHHHHHhh--ccCCCCCEEEECCC
Confidence 4899999999887 58889999999999999999999998871 126889999999875421 1357 99999999
Q ss_pred CCCC--HHHHHHH--HHhcccCCEEEEEecCCC--CCCCCCchhHHhhhccccC
Q 019408 79 FGSD--SSFLRTV--FNAVKRDGLLYLTSTDGY--SSGGHRPNNSLASYGAYIL 126 (341)
Q Consensus 79 ygsp--~~fld~a--l~~v~~gGlL~vt~TD~~--~l~g~~~~~~~r~Yg~~~~ 126 (341)
|... ..++... .+.|++||+|++++.... ..+........++||.+.+
T Consensus 135 ~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~yG~~~~ 188 (201)
T 2ift_A 135 FHFNLAEQAISLLCENNWLKPNALIYVETEKDKPLITPENWTLLKEKTTGIVSY 188 (201)
T ss_dssp SSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSSCCCCCTTEEEEEEEEETTEEE
T ss_pred CCCccHHHHHHHHHhcCccCCCcEEEEEECCCCCccccchhHHHHHHhcCCEEE
Confidence 5532 2334444 345999999998544332 2344555667788997753
No 16
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.16 E-value=4.1e-11 Score=115.04 Aligned_cols=89 Identities=16% Similarity=0.121 Sum_probs=77.6
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
|||||.+++. ++ ++.+|+++|+|+.+++.+++|++.|++. ++++++++|+.+++ ..||+|++||..
T Consensus 203 g~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~----~~v~~~~~D~~~~~-------~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 203 FAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLE----HKIIPILSDVREVD-------VKGNRVIMNLPK 268 (336)
T ss_dssp TCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCC-------CCEEEEEECCTT
T ss_pred cCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECChHHhc-------CCCcEEEECCcH
Confidence 6999999999 87 6889999999999999999999999984 46899999998775 479999999733
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
....+++.+++.+++||+|.+.+
T Consensus 269 ~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 269 FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEEEE
Confidence 34489999999999999998744
No 17
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.13 E-value=1.2e-10 Score=103.31 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=83.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||||..++.+++ +|+.+|+++|+|+.+++.+++|++.+++ .+++++++|+.+++.. ....||+|++|| |
T Consensus 62 gcG~G~~~~~l~~-~~~~~V~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~D~~~~~~~---~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 62 FAGSGALGLEALS-RYAAGATLIEMDRAVSQQLIKNLATLKA-----GNARVVNSNAMSFLAQ---KGTPHNIVFVDPPF 132 (202)
T ss_dssp TCTTCHHHHHHHH-TTCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCHHHHHSS---CCCCEEEEEECCSS
T ss_pred CCCcCHHHHHHHh-cCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEECCHHHHHhh---cCCCCCEEEECCCC
Confidence 4899999999887 5888999999999999999999999987 3688999999987643 245799999998 5
Q ss_pred CCC--HHHHHHHHH--hcccCCEEEEEecCCCC---CCCCCchhHHhhhccc
Q 019408 80 GSD--SSFLRTVFN--AVKRDGLLYLTSTDGYS---SGGHRPNNSLASYGAY 124 (341)
Q Consensus 80 gsp--~~fld~al~--~v~~gGlL~vt~TD~~~---l~g~~~~~~~r~Yg~~ 124 (341)
... ..+++...+ .|++||+|++++..... +.........++||.+
T Consensus 133 ~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~g~~ 184 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQV 184 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGCSCCCCTTEEEEEEEEETTE
T ss_pred CCCcHHHHHHHHHhcCccCCCcEEEEEECCCccccccCCcceEEeeeccCCE
Confidence 532 234444433 39999999985432211 1222333344566654
No 18
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.09 E-value=3.4e-10 Score=97.47 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=78.9
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.+++ .++.+|+++|+|+.+++.+++|++.+++. .+++++++|+.+.+.........||+|++|| |
T Consensus 52 GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~ 126 (187)
T 2fhp_A 52 YSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEP----EKFEVRKMDANRALEQFYEEKLQFDLVLLDPPY 126 (187)
T ss_dssp TCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHHHHHHHTTCCEEEEEECCCG
T ss_pred CCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCC----cceEEEECcHHHHHHHHHhcCCCCCEEEECCCC
Confidence 3899999999888 68889999999999999999999999873 4689999999997764433346899999998 5
Q ss_pred C--CCHHHHHHH--HHhcccCCEEEEEec
Q 019408 80 G--SDSSFLRTV--FNAVKRDGLLYLTST 104 (341)
Q Consensus 80 g--sp~~fld~a--l~~v~~gGlL~vt~T 104 (341)
. .....+... .+.|++||+++++..
T Consensus 127 ~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 127 AKQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp GGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 4 223444444 567899999998543
No 19
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.08 E-value=2.2e-10 Score=98.46 Aligned_cols=116 Identities=13% Similarity=0.167 Sum_probs=85.7
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.+++ .+..+|+++|+|+.+++.+++|++.+++. .+++++++|+.+++... ...||+|++|| |
T Consensus 39 GcG~G~~~~~l~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~---~~~fD~i~~~~~~ 110 (177)
T 2esr_A 39 FAGSGGLAIEAVS-RGMSAAVLVEKNRKAQAIIQDNIIMTKAE----NRFTLLKMEAERAIDCL---TGRFDLVFLDPPY 110 (177)
T ss_dssp TCTTCHHHHHHHH-TTCCEEEEECCCHHHHHHHHHHHHTTTCG----GGEEEECSCHHHHHHHB---CSCEEEEEECCSS
T ss_pred CCCCCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECcHHHhHHhh---cCCCCEEEECCCC
Confidence 3899999999988 47789999999999999999999998873 46899999999876543 34699999998 5
Q ss_pred CC--CHHHHHHHH--HhcccCCEEEEEecCCCC---CCCCCchhHHhhhccc
Q 019408 80 GS--DSSFLRTVF--NAVKRDGLLYLTSTDGYS---SGGHRPNNSLASYGAY 124 (341)
Q Consensus 80 gs--p~~fld~al--~~v~~gGlL~vt~TD~~~---l~g~~~~~~~r~Yg~~ 124 (341)
.. ...++.... +.|++||+++++...... ..........++||.+
T Consensus 111 ~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~yg~~ 162 (177)
T 2esr_A 111 AKETIVATIEALAAKNLLSEQVMVVCETDKTVLLPKEIATLGIWKEKIYGIS 162 (177)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCCCSEETTEEEEEEEEETTE
T ss_pred CcchHHHHHHHHHhCCCcCCCcEEEEEECCccccccccCceEEEEeeecCcE
Confidence 21 123344444 788999999985432221 2233444445778766
No 20
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.03 E-value=1.3e-09 Score=92.23 Aligned_cols=96 Identities=15% Similarity=0.193 Sum_probs=78.0
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.++. .|.. |+++|+|+.+++.+++|++.+++ ++++.++|+.+.+......+++||+|++|| |
T Consensus 49 GcG~G~~~~~l~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 49 FAGSGAVGLEAAS-EGWE-AVLVEKDPEAVRLLKENVRRTGL------GARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp TCSSCHHHHHHHH-TTCE-EEEECCCHHHHHHHHHHHHHHTC------CCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCCcCHHHHHHHH-CCCe-EEEEeCCHHHHHHHHHHHHHcCC------ceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 3899999999988 5766 99999999999999999998865 467899999997765433345799999998 7
Q ss_pred -CCCHHHHHHHH--HhcccCCEEEEEec
Q 019408 80 -GSDSSFLRTVF--NAVKRDGLLYLTST 104 (341)
Q Consensus 80 -gsp~~fld~al--~~v~~gGlL~vt~T 104 (341)
.....+++... +.|++||.++++..
T Consensus 121 ~~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 121 AMDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TSCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred chhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 44446676666 88999999998554
No 21
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.02 E-value=1.7e-09 Score=99.27 Aligned_cols=94 Identities=11% Similarity=0.156 Sum_probs=77.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||||..++.++. ++..+|+++|+|+.+++.+++|++.|++. ++++++++|+.++.... ...+||+|+.|| |.
T Consensus 58 ~G~G~~~~~la~-~~~~~v~gvDi~~~~~~~a~~n~~~~~~~----~~v~~~~~D~~~~~~~~--~~~~fD~Ii~npPy~ 130 (259)
T 3lpm_A 58 SGNGIIPLLLST-RTKAKIVGVEIQERLADMAKRSVAYNQLE----DQIEIIEYDLKKITDLI--PKERADIVTCNPPYF 130 (259)
T ss_dssp CTTTHHHHHHHT-TCCCEEEEECCSHHHHHHHHHHHHHTTCT----TTEEEECSCGGGGGGTS--CTTCEEEEEECCCC-
T ss_pred CchhHHHHHHHH-hcCCcEEEEECCHHHHHHHHHHHHHCCCc----ccEEEEECcHHHhhhhh--ccCCccEEEECCCCC
Confidence 899999999988 46559999999999999999999999984 57899999998765321 246899999998 53
Q ss_pred CC-----------------------HHHHHHHHHhcccCCEEEEE
Q 019408 81 SD-----------------------SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp-----------------------~~fld~al~~v~~gGlL~vt 102 (341)
.. ..+++.+.+.|++||.+++.
T Consensus 131 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 131 ATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp ----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 22 24778889999999999984
No 22
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.97 E-value=1.4e-09 Score=105.64 Aligned_cols=93 Identities=16% Similarity=0.067 Sum_probs=72.9
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC------------
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR------------ 68 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~------------ 68 (341)
+||+|.+++.+|. ++.+|+++|+|+.|++.+++|++.|++. +++++++|+.+++......+
T Consensus 221 ~cG~G~~~l~la~--~~~~V~gvd~~~~ai~~a~~n~~~ng~~-----~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 221 YCGNGNFSLALAR--NFDRVLATEIAKPSVAAAQYNIAANHID-----NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SCTTSHHHHHHGG--GSSEEEEECCCHHHHHHHHHHHHHTTCC-----SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred cCCCCHHHHHHHh--cCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 6999999997775 5679999999999999999999999983 68899999999886543211
Q ss_pred CcccEEEeCC-CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 69 EFFDLIDIDS-FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 69 ~~fDvIdlDP-ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
..||+|++|| +. ...+.+++.++++|.|...+
T Consensus 294 ~~fD~Vv~dPPr~---g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 294 YQCETIFVDPPRS---GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp CCEEEEEECCCTT---CCCHHHHHHHTTSSEEEEEE
T ss_pred CCCCEEEECcCcc---ccHHHHHHHHhCCCEEEEEE
Confidence 3799999999 21 12345667777777776544
No 23
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.92 E-value=6.7e-09 Score=96.50 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=78.4
Q ss_pred CccccHhHHHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAE-AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
.||+|..++..+.. .+..+|+++|+|+.+++.+++|++.+++. +++++++|+.++..........||+|++||
T Consensus 91 gaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-----~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~P 165 (274)
T 3ajd_A 91 CAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-----NTIIINADMRKYKDYLLKNEIFFDKILLDAP 165 (274)
T ss_dssp TCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred CCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-----cEEEEeCChHhcchhhhhccccCCEEEEcCC
Confidence 48999999998875 35578999999999999999999999873 688999999987653222245799999997
Q ss_pred C-CC--------------------CHHHHHHHHHhcccCCEEEEEec
Q 019408 79 F-GS--------------------DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 y-gs--------------------p~~fld~al~~v~~gGlL~vt~T 104 (341)
+ |. ...+++.+.+.|++||.|.+ +|
T Consensus 166 cs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~-st 211 (274)
T 3ajd_A 166 CSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVY-ST 211 (274)
T ss_dssp CC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEE-EE
T ss_pred CCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE-EE
Confidence 3 21 14678889999999999987 44
No 24
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.89 E-value=1.2e-08 Score=90.84 Aligned_cols=98 Identities=14% Similarity=0.135 Sum_probs=80.0
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC-CcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR-EFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~-~~fDvIdlDPy 79 (341)
||+|..++.++...+ ..+|+++|+|+..++.+++|++.+++. ++++++++|+.+.+....... ..||+|++|+.
T Consensus 67 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~ 142 (223)
T 3duw_A 67 TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN----DRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD 142 (223)
T ss_dssp CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC
T ss_pred CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC
Confidence 799999999987532 358999999999999999999998874 568999999999877653322 57999999983
Q ss_pred -CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 -GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
.....+++.+.+.|++||+|++..
T Consensus 143 ~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 143 KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 222467889999999999998743
No 25
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.89 E-value=3.4e-09 Score=102.85 Aligned_cols=101 Identities=18% Similarity=0.113 Sum_probs=76.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc-C--CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI-E--RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n-~--~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|+|..+.++++ .++.+|+++|+|+.+++++++|+... + ++.++..+++++.+||+++|......+++||+|++||
T Consensus 197 gG~G~~arellk-~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~ 275 (364)
T 2qfm_A 197 GGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDL 275 (364)
T ss_dssp CTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEEC
T ss_pred CChhHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECC
Confidence 689999998888 57789999999999999999998632 1 2200112689999999999987533456899999997
Q ss_pred CC-----CC-----HHHHHHH----HHhcccCCEEEEEe
Q 019408 79 FG-----SD-----SSFLRTV----FNAVKRDGLLYLTS 103 (341)
Q Consensus 79 yg-----sp-----~~fld~a----l~~v~~gGlL~vt~ 103 (341)
+. .| ..|...+ .+.|++||+|++.+
T Consensus 276 ~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 276 TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 43 13 3566665 78999999999855
No 26
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.88 E-value=7.3e-09 Score=92.53 Aligned_cols=134 Identities=14% Similarity=0.144 Sum_probs=97.3
Q ss_pred cc-ccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CG-CGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 ag-sG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
|| +|..++.++.. +..+|+++|+|+.+++.+++|++.+++ +++++++|+..+.. .....||+|+.|| |
T Consensus 64 ~G~~G~~~~~la~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~---~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 64 TGHTAMMALMAEKF-FNCKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIKG---VVEGTFDVIFSAPPY 133 (230)
T ss_dssp CTTTCHHHHHHHHH-HCCEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSSTT---TCCSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhhh---cccCceeEEEECCCC
Confidence 79 99999999884 356899999999999999999999876 46788999642211 1236899999998 5
Q ss_pred CCC----------------------HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHH
Q 019408 80 GSD----------------------SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLR 137 (341)
Q Consensus 80 gsp----------------------~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR 137 (341)
... ..+++.+.+.|++||.|++... ++ .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-----~~--------------------~----- 183 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP-----DK--------------------E----- 183 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE-----SC--------------------H-----
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec-----cc--------------------H-----
Confidence 321 4578888899999999998532 11 0
Q ss_pred HHHHHHHHHHHhcCCcEEEEEecccCCCCeEEEEEEEEeCc
Q 019408 138 MLIGGAVREASAQGYHVSPLFSYYSYHGPVFRVMLRVHRKA 178 (341)
Q Consensus 138 ~ll~~i~~~Aa~~~~~i~Pl~s~~~~~dhy~Rv~vrv~~~~ 178 (341)
.....+.+...++|..++.+ .+. .++.++.+++..+.+
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~-~~~--~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDI-KFK--VGTRWRHSLIFFKGI 221 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-EEC--CCC-CEEEEEEECCC
T ss_pred hHHHHHHHHHHHcCCceEEE-Eec--CCCeEEEEEEEeccc
Confidence 12345566677788877765 455 677777777777654
No 27
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.87 E-value=9.9e-09 Score=91.35 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=80.5
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC--CcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR--EFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~--~~fDvIdlDP 78 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. ++++++++|+.+.+......+ ..||+|++|+
T Consensus 73 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~ 148 (225)
T 3tr6_A 73 TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS----DKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA 148 (225)
T ss_dssp CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS
T ss_pred CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC----CceEEEeCCHHHHHHHhhhccCCCCccEEEECC
Confidence 799999999987522 578999999999999999999998884 568999999999886543211 5899999999
Q ss_pred CC-CCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 FG-SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 yg-sp~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ....+++.+.+.|++||+|++..
T Consensus 149 ~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 149 DKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 32 23467889999999999999743
No 28
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.86 E-value=1.1e-08 Score=102.43 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=77.4
Q ss_pred CccccHhHHHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 1 MCGCGIRSLRYLAE-AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 1 fagsG~rgir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
.||+|..++.+|.. .+..+|+++|+|+.+++.+++|++.+++. ++++++.|+.++.... ...||+|++||-
T Consensus 113 caGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-----nv~v~~~Da~~l~~~~---~~~FD~Il~DaP 184 (456)
T 3m4x_A 113 CAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-----NAIVTNHAPAELVPHF---SGFFDRIVVDAP 184 (456)
T ss_dssp SCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-----SEEEECCCHHHHHHHH---TTCEEEEEEECC
T ss_pred CCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEeCCHHHhhhhc---cccCCEEEECCC
Confidence 48999999999875 34568999999999999999999999984 5889999999876433 358999999992
Q ss_pred --CCC------------------------HHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GSD------------------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gsp------------------------~~fld~al~~v~~gGlL~vt~T 104 (341)
|.- ..+++.|.+.|++||.|.. +|
T Consensus 185 CSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvY-sT 234 (456)
T 3m4x_A 185 CSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIY-ST 234 (456)
T ss_dssp CCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEE-EE
T ss_pred CCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE-EE
Confidence 110 1567889999999999886 55
No 29
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=1.7e-08 Score=92.26 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=80.2
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC-
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF- 79 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy- 79 (341)
||+|..++.++...+ ..+|+++|+|+..++.+++|++.+++. +++++..+|+.+.+... .....||+|++|.-
T Consensus 72 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~l~~~-~~~~~fD~V~~d~~~ 146 (248)
T 3tfw_A 72 TLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD----QRVTLREGPALQSLESL-GECPAFDLIFIDADK 146 (248)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHTC-CSCCCCSEEEECSCG
T ss_pred CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHhc-CCCCCeEEEEECCch
Confidence 799999999987533 578999999999999999999998884 57899999999987654 22348999999983
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
....++++.+.+.|++||+|++..
T Consensus 147 ~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 147 PNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp GGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeC
Confidence 223478899999999999999844
No 30
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.84 E-value=1.4e-08 Score=90.59 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=80.3
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC--CcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR--EFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~--~~fDvIdlDP 78 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. ++++++++|+.+.+......+ ..||+|++||
T Consensus 78 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~ 153 (229)
T 2avd_A 78 TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE----HKIDLRLKPALETLDELLAAGEAGTFDVAVVDA 153 (229)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHHTTCTTCEEEEEECS
T ss_pred CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----CeEEEEEcCHHHHHHHHHhcCCCCCccEEEECC
Confidence 789999999987522 578999999999999999999998874 578999999998876653322 5799999998
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEE
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt 102 (341)
......+++.+.+.|++||+|++.
T Consensus 154 ~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 154 DKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp CSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 333347889999999999999974
No 31
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.84 E-value=9.3e-09 Score=92.82 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=78.8
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
+|+|..++..+... ...+|+++|+|++.++.+++|++.+++. .++++++++|+.+++... ....||+|++|+ .
T Consensus 65 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~~i~~~~gda~~~l~~~--~~~~fD~V~~d~~~ 139 (221)
T 3dr5_A 65 PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS---PSRVRFLLSRPLDVMSRL--ANDSYQLVFGQVSP 139 (221)
T ss_dssp TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECSCHHHHGGGS--CTTCEEEEEECCCT
T ss_pred CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---cCcEEEEEcCHHHHHHHh--cCCCcCeEEEcCcH
Confidence 78999999988742 2468999999999999999999998872 147999999999987643 135899999998 3
Q ss_pred CCCHHHHHHHHHhcccCCEEEE
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~v 101 (341)
.....|++.+.+.|++||+|++
T Consensus 140 ~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 140 MDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEE
Confidence 4344689999999999999998
No 32
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.82 E-value=1.4e-08 Score=94.75 Aligned_cols=96 Identities=20% Similarity=0.153 Sum_probs=78.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc--CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI--ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n--~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..++++++..++.+|+++|+|+.+++++++|+... ++. ..+++++.+|+.+++... .++||+|++|++
T Consensus 84 ~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~---~~rv~v~~~D~~~~l~~~---~~~fD~Ii~d~~ 157 (275)
T 1iy9_A 84 GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD---DPRVDVQVDDGFMHIAKS---ENQYDVIMVDST 157 (275)
T ss_dssp CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT---STTEEEEESCSHHHHHTC---CSCEEEEEESCS
T ss_pred CchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC---CCceEEEECcHHHHHhhC---CCCeeEEEECCC
Confidence 799999999987447889999999999999999998652 331 247899999999988642 468999999984
Q ss_pred CC--------CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS--------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs--------p~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ...|++.+.+.|++||++++..
T Consensus 158 ~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 158 EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 31 1479999999999999999854
No 33
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.81 E-value=1.7e-08 Score=101.24 Aligned_cols=94 Identities=18% Similarity=0.251 Sum_probs=76.6
Q ss_pred CccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
.||+|..++..|... +..+|+++|+|+.+++.+++|++.+++ . ++++++|+.++.... ...||+|++||
T Consensus 109 gaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~-----~-v~~~~~Da~~l~~~~---~~~FD~Il~D~P 179 (464)
T 3m6w_A 109 AAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA-----P-LAVTQAPPRALAEAF---GTYFHRVLLDAP 179 (464)
T ss_dssp SCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC-----C-CEEECSCHHHHHHHH---CSCEEEEEEECC
T ss_pred cCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----e-EEEEECCHHHhhhhc---cccCCEEEECCC
Confidence 489999999999753 346899999999999999999999987 4 788999999876432 35899999998
Q ss_pred C-CC------C------------------HHHHHHHHHhcccCCEEEEEec
Q 019408 79 F-GS------D------------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 y-gs------p------------------~~fld~al~~v~~gGlL~vt~T 104 (341)
+ |+ | ..+++.|.+.|++||.|.. +|
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvy-sT 229 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVY-ST 229 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEE-EE
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE-Ee
Confidence 3 11 1 3467788999999999986 55
No 34
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.80 E-value=8.9e-08 Score=86.62 Aligned_cols=141 Identities=14% Similarity=0.117 Sum_probs=99.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++..+......+|+++|+|+.+++.+++|++.+++. +++++++|+.++.... .....||+|+.+.+..
T Consensus 79 ~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~-~~~~~fD~V~~~~~~~ 152 (240)
T 1xdz_A 79 AGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-----NTTFCHDRAETFGQRK-DVRESYDIVTARAVAR 152 (240)
T ss_dssp SSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEESCHHHHTTCT-TTTTCEEEEEEECCSC
T ss_pred CCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEeccHHHhcccc-cccCCccEEEEeccCC
Confidence 799999999986433467999999999999999999999873 5889999998754210 0135799999998776
Q ss_pred CHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhcCCcEEEEEecc
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYY 161 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i~Pl~s~~ 161 (341)
...+++.+.+.|++||.+++.. |... ..| +..+.+...++|..+.-...+.
T Consensus 153 ~~~~l~~~~~~LkpgG~l~~~~-------g~~~----------------~~~------~~~~~~~l~~~g~~~~~~~~~~ 203 (240)
T 1xdz_A 153 LSVLSELCLPLVKKNGLFVALK-------AASA----------------EEE------LNAGKKAITTLGGELENIHSFK 203 (240)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEE-------CC-C----------------HHH------HHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEe-------CCCc----------------hHH------HHHHHHHHHHcCCeEeEEEEEe
Confidence 7788899999999999998742 2110 111 2344566677777665554444
Q ss_pred cCCCCeEEEEEEEEeC
Q 019408 162 SYHGPVFRVMLRVHRK 177 (341)
Q Consensus 162 ~~~dhy~Rv~vrv~~~ 177 (341)
.|...-.|.++.+.+.
T Consensus 204 ~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 204 LPIEESDRNIMVIRKI 219 (240)
T ss_dssp CTTTCCEEEEEEEEEC
T ss_pred cCCCCCceEEEEEEec
Confidence 3444445666666543
No 35
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.80 E-value=3e-08 Score=89.30 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=79.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEe---CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDI---DS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdl---DP 78 (341)
||+|..++.+|.......|+++|+|+.+++.+++|++.+++. +++++++|+.+++.... ....||.|++ ||
T Consensus 43 cG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-----nv~~~~~Da~~~l~~~~-~~~~~d~v~~~~~~p 116 (218)
T 3dxy_A 43 FGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-----NLRVMCHDAVEVLHKMI-PDNSLRMVQLFFPDP 116 (218)
T ss_dssp CTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-----SEEEECSCHHHHHHHHS-CTTCEEEEEEESCCC
T ss_pred eeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-----cEEEEECCHHHHHHHHc-CCCChheEEEeCCCC
Confidence 799999999998533467999999999999999999998873 58999999999876532 2457998877 77
Q ss_pred CCCCH---------HHHHHHHHhcccCCEEEEEecCC
Q 019408 79 FGSDS---------SFLRTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 79 ygsp~---------~fld~al~~v~~gGlL~vt~TD~ 106 (341)
+-... .|++.+.+.|++||.|.+ +||-
T Consensus 117 ~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i-~td~ 152 (218)
T 3dxy_A 117 WHKARHNKRRIVQVPFAELVKSKLQLGGVFHM-ATDW 152 (218)
T ss_dssp CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE-EESC
T ss_pred ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE-EeCC
Confidence 54321 489999999999999998 6643
No 36
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.80 E-value=5.8e-09 Score=96.22 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=77.1
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH---cCCCCCCCccEEEEeccHHHHHHHh---hhcCCcccEE
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS---IERGSGDEKRWVVTHFDANRVLSEC---YLKREFFDLI 74 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~---n~~~~~~~~~~~v~~~DA~~~l~~~---~~~~~~fDvI 74 (341)
.||||..++.++......+|+++|+|+.+++.+++|++. |++. ++++++++|+.+++... ......||+|
T Consensus 44 G~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~----~~v~~~~~D~~~~~~~~~~~~~~~~~fD~V 119 (260)
T 2ozv_A 44 GAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS----ARIEVLEADVTLRAKARVEAGLPDEHFHHV 119 (260)
T ss_dssp CSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG----GGEEEEECCTTCCHHHHHHTTCCTTCEEEE
T ss_pred CChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc----ceEEEEeCCHHHHhhhhhhhccCCCCcCEE
Confidence 389999999999853346899999999999999999998 8774 56899999998775422 1124579999
Q ss_pred EeCC-CCCC---------------------HHHHHHHHHhcccCCEEEEE
Q 019408 75 DIDS-FGSD---------------------SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 75 dlDP-ygsp---------------------~~fld~al~~v~~gGlL~vt 102 (341)
+.|| |... ..++..+.+.|++||.+++.
T Consensus 120 v~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 120 IMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp EECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 9997 6532 35677888999999999984
No 37
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.79 E-value=3.4e-08 Score=90.51 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=80.5
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc---CCcccEEEeC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK---REFFDLIDID 77 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~---~~~fDvIdlD 77 (341)
+|+|..++.++.... ..+|+++|+|+..++.+++|++.+++. ++++++++|+.+++...... ...||+|++|
T Consensus 88 ~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d 163 (247)
T 1sui_A 88 VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD----HKIDFREGPALPVLDEMIKDEKNHGSYDFIFVD 163 (247)
T ss_dssp CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHSGGGTTCBSEEEEC
T ss_pred CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHHHHHHhccCCCCCEEEEEEc
Confidence 799999999987522 468999999999999999999998874 57899999999988654221 3579999999
Q ss_pred C-CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 78 S-FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 P-ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
. ......+++.+.+.|++||+|.+..
T Consensus 164 ~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 164 ADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 8 3334578899999999999999743
No 38
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.79 E-value=1.6e-08 Score=88.82 Aligned_cols=93 Identities=18% Similarity=0.112 Sum_probs=78.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++......+|+++|+|+.+++.+++|++.+++ .++++.++|+.+.+.. ...||+|++++ +.
T Consensus 49 ~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~----~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 49 AGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-----RNVTLVEAFAPEGLDD----LPDPDRVFIGGSGG 119 (204)
T ss_dssp CTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-----TTEEEEECCTTTTCTT----SCCCSEEEESCCTT
T ss_pred CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-----CcEEEEeCChhhhhhc----CCCCCEEEECCCCc
Confidence 79999999999853357899999999999999999999987 3688999998765432 24699999998 55
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
.+..+++.+.+.|++||.|++..
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 120 MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CHHHHHHHHHHhcCCCeEEEEEe
Confidence 56688999999999999999854
No 39
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.77 E-value=2.8e-08 Score=90.25 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=79.9
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc---CCcccEEEeC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK---REFFDLIDID 77 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~---~~~fDvIdlD 77 (341)
+|+|..++.+++... ..+|+++|+|+..++.+++|++.+++. ++++++++|+.+++...... ...||+|++|
T Consensus 79 ~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d 154 (237)
T 3c3y_A 79 VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE----HKINFIESDAMLALDNLLQGQESEGSYDFGFVD 154 (237)
T ss_dssp CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHSTTCTTCEEEEEEC
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhccCCCCCcCEEEEC
Confidence 689999999988522 468999999999999999999998874 57899999999988765322 3579999999
Q ss_pred CC-CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 78 SF-GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 Py-gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+- .....+++.+.+.|++||+|.+..
T Consensus 155 ~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 155 ADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 72 222477889999999999998743
No 40
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.77 E-value=2.4e-08 Score=88.71 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=76.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.+++ . ..+|+++|+|+.+++.+++|++.+++. ++++++++|+.+.+.. ...||+|++++-..
T Consensus 64 cG~G~~~~~la~-~-~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~~~~----~~~~D~v~~~~~~~ 133 (204)
T 3njr_A 64 GGSGSVSVEWCL-A-GGRAITIEPRADRIENIQKNIDTYGLS----PRMRAVQGTAPAALAD----LPLPEAVFIGGGGS 133 (204)
T ss_dssp CTTCHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCTTGGGTT----SCCCSEEEECSCCC
T ss_pred CCCCHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHHHHcCCC----CCEEEEeCchhhhccc----CCCCCEEEECCccc
Confidence 799999999998 4 568999999999999999999999883 4789999999875432 24699999998323
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ ++++.+.+.|++||.|+++.
T Consensus 134 ~-~~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 134 Q-ALYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp H-HHHHHHHHHSCTTCEEEEEE
T ss_pred H-HHHHHHHHhcCCCcEEEEEe
Confidence 3 38899999999999999854
No 41
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.76 E-value=2.3e-08 Score=93.65 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=76.9
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcc---cEEEeC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFF---DLIDID 77 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~f---DvIdlD 77 (341)
.||||..++..+++ ...+|+++|+|+.+++.+++|++.+++. ++++++++|+...+. .+| |+|+.+
T Consensus 131 G~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~----~~v~~~~~D~~~~~~------~~f~~~D~Ivsn 199 (284)
T 1nv8_A 131 GTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVS----DRFFVRKGEFLEPFK------EKFASIEMILSN 199 (284)
T ss_dssp SCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCT----TSEEEEESSTTGGGG------GGTTTCCEEEEC
T ss_pred eCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECcchhhcc------cccCCCCEEEEc
Confidence 38999999999997 6678999999999999999999999884 468999999987442 368 999999
Q ss_pred C-CCCCH----------------------HHHHHHH-HhcccCCEEEEEe
Q 019408 78 S-FGSDS----------------------SFLRTVF-NAVKRDGLLYLTS 103 (341)
Q Consensus 78 P-ygsp~----------------------~fld~al-~~v~~gGlL~vt~ 103 (341)
| |.... .++...+ +.+++||+|+++.
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 8 65321 5778888 9999999999843
No 42
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.75 E-value=2e-08 Score=90.64 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=79.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHH-HhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLS-ECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~-~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++..+......+|+++|+|+.+++.+++|++.+++. ++++++++|+.+.+. .. ...||+|++|+ .
T Consensus 80 ~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~---~~~fD~V~~~~~~ 152 (232)
T 3ntv_A 80 TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE----NQVRIIEGNALEQFENVN---DKVYDMIFIDAAK 152 (232)
T ss_dssp CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCHHHHT---TSCEEEEEEETTS
T ss_pred CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHHHHHHhhc---cCCccEEEEcCcH
Confidence 799999999987423578999999999999999999998874 478999999988776 43 35899999998 4
Q ss_pred CCCHHHHHHHHHhcccCCEEEEE
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt 102 (341)
.....+++.+.+.|++||+|++.
T Consensus 153 ~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 153 AQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp SSHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEe
Confidence 44457889999999999999874
No 43
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.75 E-value=5.6e-09 Score=95.48 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=80.4
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc--CCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK--REFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~--~~~fDvIdlDP 78 (341)
||+|..++.+|...+ ..+|+++|+|+.+++.+++|++.+++. ++++++++|+.+++...... ...||+|++|.
T Consensus 69 ~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~ 144 (242)
T 3r3h_A 69 TFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE----HKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDA 144 (242)
T ss_dssp SCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT----TTEEEEESCHHHHHHHHHHHHCSSCEEEEEEES
T ss_pred CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcC
Confidence 799999999987422 468999999999999999999999884 57999999999988764321 35899999998
Q ss_pred C-CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 F-GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 y-gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
- .....+++.+.+.|++||+|++.-
T Consensus 145 ~~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 145 DKTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 3 223467889999999999999844
No 44
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.74 E-value=9.9e-08 Score=87.63 Aligned_cols=140 Identities=10% Similarity=0.029 Sum_probs=103.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||||..|+..+......+|+++|+|+.+++.+++|++.+++. +++++++|+.++.... .....||+|+..-+..
T Consensus 89 ~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-----~v~~~~~d~~~~~~~~-~~~~~fD~I~s~a~~~ 162 (249)
T 3g89_A 89 TGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-----GARALWGRAEVLAREA-GHREAYARAVARAVAP 162 (249)
T ss_dssp CTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEECCHHHHTTST-TTTTCEEEEEEESSCC
T ss_pred CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----ceEEEECcHHHhhccc-ccCCCceEEEECCcCC
Confidence 799999999998655678999999999999999999999884 5899999998764310 1135899999987665
Q ss_pred CHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhcCCcEEEEEecc
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYY 161 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i~Pl~s~~ 161 (341)
...+++.+.+.|++||.+++.. |..+ ..| +..+.+++.++|..+.-+..+.
T Consensus 163 ~~~ll~~~~~~LkpgG~l~~~~-------g~~~----------------~~e------~~~~~~~l~~~G~~~~~~~~~~ 213 (249)
T 3g89_A 163 LCVLSELLLPFLEVGGAAVAMK-------GPRV----------------EEE------LAPLPPALERLGGRLGEVLALQ 213 (249)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEE-------CSCC----------------HHH------HTTHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEe-------CCCc----------------HHH------HHHHHHHHHHcCCeEEEEEEee
Confidence 5678888999999999988743 2210 111 2344556667788777777666
Q ss_pred cCCCCeEEEEEEEEe
Q 019408 162 SYHGPVFRVMLRVHR 176 (341)
Q Consensus 162 ~~~dhy~Rv~vrv~~ 176 (341)
.|...-.|..+.+.+
T Consensus 214 ~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 214 LPLSGEARHLVVLEK 228 (249)
T ss_dssp CTTTCCEEEEEEEEE
T ss_pred CCCCCCcEEEEEEEe
Confidence 555445677666655
No 45
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.74 E-value=2.2e-08 Score=89.44 Aligned_cols=96 Identities=9% Similarity=0.135 Sum_probs=74.1
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhh--cCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYL--KREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~--~~~~fDvIdlDP 78 (341)
||+|..++.++... ...+|+++|+|+.+++.+++|++.+++. ++++++++|+.+++..... ....||+|++|+
T Consensus 67 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~ 142 (221)
T 3u81_A 67 AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ----DKVTILNGASQDLIPQLKKKYDVDTLDMVFLDH 142 (221)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHGGGTTTTSCCCCCSEEEECS
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC----CceEEEECCHHHHHHHHHHhcCCCceEEEEEcC
Confidence 79999999998742 2468999999999999999999999884 5799999999988765421 115799999998
Q ss_pred CCCCH----HHHHHHHHhcccCCEEEEE
Q 019408 79 FGSDS----SFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 79 ygsp~----~fld~al~~v~~gGlL~vt 102 (341)
..... .++... +.|++||+|++.
T Consensus 143 ~~~~~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 143 WKDRYLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp CGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred CcccchHHHHHHHhc-cccCCCeEEEEe
Confidence 32211 233333 789999999873
No 46
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.73 E-value=6.7e-08 Score=84.78 Aligned_cols=86 Identities=23% Similarity=0.341 Sum_probs=69.2
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.++. .|+.+|+++|+|+.+++.+++|++.+++ +++++++|+.++ ...||+|++|| |
T Consensus 57 g~G~G~~~~~l~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~-------~~~~D~v~~~~p~ 122 (207)
T 1wy7_A 57 GAGTGVLSYGALL-LGAKEVICVEVDKEAVDVLIENLGEFKG------KFKVFIGDVSEF-------NSRVDIVIMNPPF 122 (207)
T ss_dssp TCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHTGGGTT------SEEEEESCGGGC-------CCCCSEEEECCCC
T ss_pred eCCCCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHcCC------CEEEEECchHHc-------CCCCCEEEEcCCC
Confidence 4899999999988 5788999999999999999999998865 478899998763 23799999999 6
Q ss_pred CCC-----HHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSD-----SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp-----~~fld~al~~v~~gGlL~vt~ 103 (341)
+.. ..+++.+.+.+ | .+++.+
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~-~~~~~~ 148 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--D-VVYSIH 148 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--S-EEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--C-cEEEEE
Confidence 532 36788888887 4 444434
No 47
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.73 E-value=1.6e-08 Score=100.28 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=71.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
+||+|.+++.++. . +.+|+++|+|+.+++.+++|++.|++ . ++++++|+.+++. ..||+|++|| +
T Consensus 298 gcG~G~~sl~la~-~-~~~V~gvD~s~~ai~~A~~n~~~ngl-----~-v~~~~~d~~~~~~------~~fD~Vv~dPPr 363 (425)
T 2jjq_A 298 YSGVGTFGIYLAK-R-GFNVKGFDSNEFAIEMARRNVEINNV-----D-AEFEVASDREVSV------KGFDTVIVDPPR 363 (425)
T ss_dssp TCTTTHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHHTC-----C-EEEEECCTTTCCC------TTCSEEEECCCT
T ss_pred eccchHHHHHHHH-c-CCEEEEEECCHHHHHHHHHHHHHcCC-----c-EEEEECChHHcCc------cCCCEEEEcCCc
Confidence 5899999999987 3 46899999999999999999999987 4 7899999987642 1799999999 3
Q ss_pred -CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 -GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
|....+++ ++..++++|++++++
T Consensus 364 ~g~~~~~~~-~l~~l~p~givyvsc 387 (425)
T 2jjq_A 364 AGLHPRLVK-RLNREKPGVIVYVSC 387 (425)
T ss_dssp TCSCHHHHH-HHHHHCCSEEEEEES
T ss_pred cchHHHHHH-HHHhcCCCcEEEEEC
Confidence 33323444 456689999999954
No 48
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.73 E-value=2.7e-08 Score=93.72 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=76.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH--cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS--IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~--n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..++..++..+..+|+++|+|+.+++.+++|+.. +++. ..+++++++|+.+++... .++||+|++||+
T Consensus 99 ~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~l~~~---~~~fD~Ii~d~~ 172 (296)
T 1inl_A 99 GGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD---DPRAEIVIANGAEYVRKF---KNEFDVIIIDST 172 (296)
T ss_dssp CTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHGGGC---SSCEEEEEEEC-
T ss_pred CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC---CCceEEEECcHHHHHhhC---CCCceEEEEcCC
Confidence 79999999998854678999999999999999999865 3331 146899999999887532 457999999984
Q ss_pred CC---------CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS---------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs---------p~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ...|++.+.+.|++||+|++..
T Consensus 173 ~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 173 DPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp ---------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 31 1478889999999999999853
No 49
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.72 E-value=5e-08 Score=88.11 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=80.1
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC--CcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR--EFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~--~~fDvIdlDP 78 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. +++++..+|+.+.+....... ..||+|++|.
T Consensus 81 ~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~ 156 (232)
T 3cbg_A 81 VFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA----EKISLRLGPALATLEQLTQGKPLPEFDLIFIDA 156 (232)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHHHHHHTSSSCCCEEEEEECS
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECC
Confidence 789999999987532 358999999999999999999988874 578999999998887654322 5799999997
Q ss_pred C-CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 F-GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 y-gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
- .....+++.+.+.|++||+|++..
T Consensus 157 ~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 157 DKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 3 223467889999999999999844
No 50
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.72 E-value=7.4e-08 Score=83.85 Aligned_cols=95 Identities=11% Similarity=0.046 Sum_probs=76.6
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++.++... +..+|+++|+|+.+++.+++|++.+++. .+++++++|+.++... ..+.||+|+.|| |
T Consensus 31 cG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~---~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 31 CGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI----DRVTLIKDGHQNMDKY---IDCPVKAVMFNLGY 103 (197)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG----GGEEEECSCGGGGGGT---CCSCEEEEEEEESB
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHhhh---ccCCceEEEEcCCc
Confidence 79999999998853 3458999999999999999999998873 4789999998765422 236899999997 4
Q ss_pred CC------------CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS------------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs------------p~~fld~al~~v~~gGlL~vt~ 103 (341)
-. +..++..+.+.|++||.|++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 104 LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 10 1357889999999999999854
No 51
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.72 E-value=3.1e-08 Score=95.20 Aligned_cols=94 Identities=17% Similarity=0.095 Sum_probs=76.1
Q ss_pred CccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
|||||...++++... ...+|+++|+|+.+++.+++|++.+++. .+++.++|+.++... ...||+|+.||
T Consensus 211 gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-----~i~~~~~D~~~~~~~----~~~~D~Ii~npP 281 (354)
T 3tma_A 211 FTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-----WIRFLRADARHLPRF----FPEVDRILANPP 281 (354)
T ss_dssp SCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-----TCEEEECCGGGGGGT----CCCCSEEEECCC
T ss_pred CCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEeCChhhCccc----cCCCCEEEECCC
Confidence 699999999999853 2367999999999999999999999872 678999999875321 24589999998
Q ss_pred CCCC-----------HHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSD-----------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp-----------~~fld~al~~v~~gGlL~vt~ 103 (341)
||.. ..+++.+.+.+++||.+++..
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8742 245667778999999999844
No 52
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.70 E-value=9.6e-09 Score=97.01 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=74.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC--
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF-- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy-- 79 (341)
+|+|..+.+.++..+..+|+++|+|+.+++++++|+...+...-+..+++++.+|+.+++.. ..++||+|++|++
T Consensus 92 ~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fDvIi~D~~~p 168 (294)
T 3adn_A 92 GGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---TSQTFDVIISDCTDP 168 (294)
T ss_dssp CTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C---CCCCEEEEEECC---
T ss_pred CChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh---cCCCccEEEECCCCc
Confidence 69999999998855678999999999999999999986531000124678999999988764 2468999999973
Q ss_pred -CCC-----HHHHHHHHHhcccCCEEEEEe
Q 019408 80 -GSD-----SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -gsp-----~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+ .+|++.+.+.|++||+|++.+
T Consensus 169 ~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 169 IGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 322 468889999999999999855
No 53
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.70 E-value=8.4e-08 Score=82.65 Aligned_cols=92 Identities=11% Similarity=0.024 Sum_probs=70.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC-CCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID-SFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD-Pyg 80 (341)
||+|..++.+++ . ..+|+++|+|+.+++.+++|++.+++. ++++.+.|+..+.. . ..+.||+|+.+ ||-
T Consensus 31 cG~G~~~~~la~-~-~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~~~~~l~~-~--~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 31 MGNGNDTAFLAG-L-SKKVYAFDVQEQALGKTSQRLSDLGIE-----NTELILDGHENLDH-Y--VREPIRAAIFNLGYL 100 (185)
T ss_dssp CTTSHHHHHHHT-T-SSEEEEEESCHHHHHHHHHHHHHHTCC-----CEEEEESCGGGGGG-T--CCSCEEEEEEEEC--
T ss_pred CCCCHHHHHHHH-h-CCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCcHHHHHh-h--ccCCcCEEEEeCCCC
Confidence 899999999998 4 568999999999999999999998873 67888877654321 1 14579999999 343
Q ss_pred CC------------HHHHHHHHHhcccCCEEEEEe
Q 019408 81 SD------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp------------~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ..++..+.+.|++||.|.++.
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 21 134577789999999999854
No 54
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.70 E-value=3.6e-08 Score=93.65 Aligned_cols=94 Identities=20% Similarity=0.156 Sum_probs=75.9
Q ss_pred CccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 1 MCGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 1 fagsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
.||+|..++..+... +..+|+++|+|+..++.+++|++.+++. +++++++|+..+.. ....||+|++||-
T Consensus 126 g~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~~~----~~~~fD~Il~d~P 196 (315)
T 1ixk_A 126 AAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-----NVILFHSSSLHIGE----LNVEFDKILLDAP 196 (315)
T ss_dssp CSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-----SEEEESSCGGGGGG----GCCCEEEEEEECC
T ss_pred CCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----eEEEEECChhhccc----ccccCCEEEEeCC
Confidence 389999999998752 3468999999999999999999999883 58899999986542 2357999999982
Q ss_pred --CC------C------------------HHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GS------D------------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gs------p------------------~~fld~al~~v~~gGlL~vt~T 104 (341)
|. | ..+++.+.+.|++||.|.+ +|
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~-st 246 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVY-ST 246 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE-EE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE-Ee
Confidence 21 1 3677889999999999987 55
No 55
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.68 E-value=3.5e-08 Score=91.30 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=74.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||||..++..+.+.+..+|+++|+|+.+++.+++|++.+++. ++++.++|+...+. ...||+|+.+| |.
T Consensus 118 ~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-----~v~~~~~d~~~~~~-----~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 118 TGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-----NIHILQSDWFSALA-----GQQFAMIVSNPPYI 187 (276)
T ss_dssp CTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-----SEEEECCSTTGGGT-----TCCEEEEEECCCCB
T ss_pred CCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEcchhhhcc-----cCCccEEEECCCCC
Confidence 799999999998655678999999999999999999999873 68899999876431 35799999998 64
Q ss_pred CC----------------------------HHHHHHHHHhcccCCEEEEE
Q 019408 81 SD----------------------------SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp----------------------------~~fld~al~~v~~gGlL~vt 102 (341)
.. ..+++.+.+.|++||+|.++
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 22 24566778899999999985
No 56
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.68 E-value=5.9e-08 Score=85.73 Aligned_cols=93 Identities=15% Similarity=0.116 Sum_probs=76.8
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++..+.... ..+|+++|+|+.+++.+++|++.+++. ++++++++|+.+.+... .. ||+|++|. .
T Consensus 65 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~---~~-fD~v~~~~~~ 136 (210)
T 3c3p_A 65 DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI----DRVELQVGDPLGIAAGQ---RD-IDILFMDCDV 136 (210)
T ss_dssp CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG----GGEEEEESCHHHHHTTC---CS-EEEEEEETTT
T ss_pred CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----ceEEEEEecHHHHhccC---CC-CCEEEEcCCh
Confidence 799999999987422 468999999999999999999988773 56899999999876532 34 99999997 3
Q ss_pred CCCHHHHHHHHHhcccCCEEEEE
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt 102 (341)
.....+++.+.+.|++||+|++.
T Consensus 137 ~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 137 FNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhHHHHHHHHHhcCCCeEEEEE
Confidence 33457788999999999999974
No 57
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.68 E-value=5.6e-08 Score=92.77 Aligned_cols=96 Identities=21% Similarity=0.203 Sum_probs=78.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH--cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS--IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~--n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..+++.++..+..+|+++|+|+.+++.+++|+.. ++++ ..+++++++|+.+++... .++||+|++||+
T Consensus 125 ~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~---~~~v~~~~~D~~~~l~~~---~~~fDvIi~d~~ 198 (321)
T 2pt6_A 125 GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE---DKRVNVFIEDASKFLENV---TNTYDVIIVDSS 198 (321)
T ss_dssp CTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG---STTEEEEESCHHHHHHHC---CSCEEEEEEECC
T ss_pred CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCcEEEEEccHHHHHhhc---CCCceEEEECCc
Confidence 69999999998854678999999999999999999876 3331 146899999999987643 457999999984
Q ss_pred ---CCC-----HHHHHHHHHhcccCCEEEEEe
Q 019408 80 ---GSD-----SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 ---gsp-----~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+ ..|++.+.+.|++||+|++..
T Consensus 199 ~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 199 DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 211 478889999999999999864
No 58
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.67 E-value=6.7e-08 Score=90.26 Aligned_cols=93 Identities=20% Similarity=0.196 Sum_probs=75.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc--CC-------CCCCCccEEEEeccHHHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI--ER-------GSGDEKRWVVTHFDANRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n--~~-------~~~~~~~~~v~~~DA~~~l~~~~~~~~~fD 72 (341)
+|+|..+++.++. +..+|+++|+|+.+++.+++|+ .. ++ . ..+++++.+|+.+++.. .+.||
T Consensus 84 ~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~---~~~v~~~~~D~~~~l~~----~~~fD 154 (281)
T 1mjf_A 84 GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGK---HEKAKLTIGDGFEFIKN----NRGFD 154 (281)
T ss_dssp CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTC---CSSEEEEESCHHHHHHH----CCCEE
T ss_pred CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCC---CCcEEEEECchHHHhcc----cCCee
Confidence 6999999999985 8889999999999999999998 32 21 1 14688999999998764 35799
Q ss_pred EEEeCCCC---C-----CHHHHHHHHHhcccCCEEEEEe
Q 019408 73 LIDIDSFG---S-----DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 73 vIdlDPyg---s-----p~~fld~al~~v~~gGlL~vt~ 103 (341)
+|++|++. . ...|++.+.+.|++||+|++..
T Consensus 155 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 155 VIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999852 1 1468889999999999999853
No 59
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.66 E-value=6.4e-08 Score=91.66 Aligned_cols=96 Identities=19% Similarity=0.191 Sum_probs=76.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH--cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS--IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~--n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..+++.++..+..+|+++|+|+..++.+++|+.. +++. ..+++++.+|+.+++... .++||+|++|++
T Consensus 104 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~---~~rv~v~~~Da~~~l~~~---~~~fD~Ii~d~~ 177 (304)
T 2o07_A 104 GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS---SSKLTLHVGDGFEFMKQN---QDAFDVIITDSS 177 (304)
T ss_dssp CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHHTC---SSCEEEEEEECC
T ss_pred CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHhhC---CCCceEEEECCC
Confidence 69999999998744568999999999999999999876 3431 146899999999988642 468999999984
Q ss_pred CC--------CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS--------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs--------p~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ...|++.+.+.|++||+|++..
T Consensus 178 ~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 178 DPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp -----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 31 1257889999999999999855
No 60
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.64 E-value=4.3e-08 Score=97.14 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=74.7
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|.+++..+.. +.+|+++|+|+.+++.+++|++.|++. +++++++|+.+.+.........||+|++|| |
T Consensus 294 gcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~-----~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr 366 (433)
T 1uwv_A 294 FCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQ-----NVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR 366 (433)
T ss_dssp SCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCTTSCCSSSGGGTTCCSEEEECCCT
T ss_pred CCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEECCHHHHhhhhhhhcCCCCEEEECCCC
Confidence 48999999999984 568999999999999999999999883 688999999875543212235799999999 5
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
.....++ ..+..++++++++|++
T Consensus 367 ~g~~~~~-~~l~~~~p~~ivyvsc 389 (433)
T 1uwv_A 367 AGAAGVM-QQIIKLEPIRIVYVSC 389 (433)
T ss_dssp TCCHHHH-HHHHHHCCSEEEEEES
T ss_pred ccHHHHH-HHHHhcCCCeEEEEEC
Confidence 4344444 3455678899999854
No 61
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.64 E-value=2e-07 Score=83.15 Aligned_cols=96 Identities=14% Similarity=0.088 Sum_probs=76.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEe---CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDI---DS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdl---DP 78 (341)
||+|..++..|.......|+++|+|+.+++.+++|++.+++. +++++++|+..+.... ....||.|++ ||
T Consensus 47 cG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-----nv~~~~~d~~~l~~~~--~~~~~d~v~~~~~~p 119 (213)
T 2fca_A 47 TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-----NVKLLNIDADTLTDVF--EPGEVKRVYLNFSDP 119 (213)
T ss_dssp CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-----SEEEECCCGGGHHHHC--CTTSCCEEEEESCCC
T ss_pred cCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-----CEEEEeCCHHHHHhhc--CcCCcCEEEEECCCC
Confidence 799999999988643468999999999999999999988873 6889999998743222 2346998876 67
Q ss_pred CCC---------CHHHHHHHHHhcccCCEEEEEecC
Q 019408 79 FGS---------DSSFLRTVFNAVKRDGLLYLTSTD 105 (341)
Q Consensus 79 ygs---------p~~fld~al~~v~~gGlL~vt~TD 105 (341)
+.. ...+++.+.+.|++||.|.+ .||
T Consensus 120 ~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~-~td 154 (213)
T 2fca_A 120 WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHF-KTD 154 (213)
T ss_dssp CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEE-EES
T ss_pred CcCccccccccCcHHHHHHHHHHcCCCCEEEE-EeC
Confidence 543 24789999999999999998 443
No 62
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.64 E-value=3.5e-08 Score=86.13 Aligned_cols=95 Identities=14% Similarity=0.001 Sum_probs=56.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||||..++.++......+|+++|+|+.+++.+++|++.++. +++++++|+.+.+.........||+|+.|| |.
T Consensus 39 ~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~ 112 (215)
T 4dzr_A 39 TGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA------VVDWAAADGIEWLIERAERGRPWHAIVSNPPYI 112 (215)
T ss_dssp SSBCHHHHHHHHHCTTEEEEEEECC-------------------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCC
T ss_pred CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC------ceEEEEcchHhhhhhhhhccCcccEEEECCCCC
Confidence 79999999999852235899999999999999999998764 467889999986654222346899999998 53
Q ss_pred CC-----------------------------HHHHHHHHHhcccCCE-EEEE
Q 019408 81 SD-----------------------------SSFLRTVFNAVKRDGL-LYLT 102 (341)
Q Consensus 81 sp-----------------------------~~fld~al~~v~~gGl-L~vt 102 (341)
.. ..++..+.+.|++||. ++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 113 PTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp C------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred CCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 21 3445566688999999 5553
No 63
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.63 E-value=6.1e-08 Score=85.97 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=75.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG- 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg- 80 (341)
||+|..++.++......+|+++|+|+.+++.+++|++.+++ .+++++++|+..+... .....||+|++++--
T Consensus 50 cG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~--~~~~~~D~i~~~~~~~ 122 (214)
T 1yzh_A 50 SGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-----PNIKLLWVDGSDLTDY--FEDGEIDRLYLNFSDP 122 (214)
T ss_dssp CTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----SSEEEEECCSSCGGGT--SCTTCCSEEEEESCCC
T ss_pred cCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-----CCEEEEeCCHHHHHhh--cCCCCCCEEEEECCCC
Confidence 79999999999863346899999999999999999999887 3688999999863211 123579999988621
Q ss_pred C-----------CHHHHHHHHHhcccCCEEEEEecC
Q 019408 81 S-----------DSSFLRTVFNAVKRDGLLYLTSTD 105 (341)
Q Consensus 81 s-----------p~~fld~al~~v~~gGlL~vt~TD 105 (341)
. ...+++.+.+.|++||.|.+ .||
T Consensus 123 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~ 157 (214)
T 1yzh_A 123 WPKKRHEKRRLTYKTFLDTFKRILPENGEIHF-KTD 157 (214)
T ss_dssp CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEE-EES
T ss_pred ccccchhhhccCCHHHHHHHHHHcCCCcEEEE-EeC
Confidence 0 13689999999999999998 443
No 64
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.63 E-value=8.1e-08 Score=91.51 Aligned_cols=96 Identities=20% Similarity=0.154 Sum_probs=75.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc--CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI--ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n--~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..++..++..+..+|+++|+|+.+++.+++|+..+ ++. ..+++++.+|+.+++.. ..++||+|++|++
T Consensus 117 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~---~~rv~~~~~D~~~~l~~---~~~~fD~Ii~d~~ 190 (314)
T 2b2c_A 117 GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS---HPKLDLFCGDGFEFLKN---HKNEFDVIITDSS 190 (314)
T ss_dssp CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG---CTTEEEECSCHHHHHHH---CTTCEEEEEECCC
T ss_pred CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC---CCCEEEEEChHHHHHHh---cCCCceEEEEcCC
Confidence 689999999987545689999999999999999998753 331 14789999999998865 2458999999984
Q ss_pred C---CC-----HHHHHHHHHhcccCCEEEEEe
Q 019408 80 G---SD-----SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 g---sp-----~~fld~al~~v~~gGlL~vt~ 103 (341)
. .+ ..|++.+.+.|++||+|++..
T Consensus 191 ~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 191 DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp -------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 2 11 477888899999999999854
No 65
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.61 E-value=1.8e-07 Score=84.41 Aligned_cols=98 Identities=15% Similarity=0.104 Sum_probs=78.6
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc------------C
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK------------R 68 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~------------~ 68 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. +++++.++|+.+.+...... +
T Consensus 69 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~ 144 (239)
T 2hnk_A 69 TFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE----NKIFLKLGSALETLQVLIDSKSAPSWASDFAFG 144 (239)
T ss_dssp CTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCS
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHHHHHHHHHhhcccccccccccCC
Confidence 789999999987533 568999999999999999999988874 46899999999877654221 2
Q ss_pred -CcccEEEeCCC-CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 69 -EFFDLIDIDSF-GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 69 -~~fDvIdlDPy-gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
..||+|++|.- .....+++.+.+.|++||+|++..
T Consensus 145 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 145 PSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 57999999962 222367888999999999999854
No 66
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.60 E-value=2.2e-07 Score=79.34 Aligned_cols=92 Identities=23% Similarity=0.217 Sum_probs=77.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++. .+ .+|+++|+|+.+++.+++|++.+++. .++++.+.|+...+.. ...||+|++++ +.
T Consensus 42 ~G~G~~~~~l~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~----~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 42 CGTGGVTLELAG-RV-RRVYAIDRNPEAISTTEMNLQRHGLG----DNVTLMEGDAPEALCK----IPDIDIAVVGGSGG 111 (192)
T ss_dssp CTTSHHHHHHHT-TS-SEEEEEESCHHHHHHHHHHHHHTTCC----TTEEEEESCHHHHHTT----SCCEEEEEESCCTT
T ss_pred CCCCHHHHHHHH-hc-CEEEEEECCHHHHHHHHHHHHHcCCC----cceEEEecCHHHhccc----CCCCCEEEECCchH
Confidence 799999999987 45 78999999999999999999998873 4688899999875432 13799999998 45
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
....+++.+.+.+++||.+.+..
T Consensus 112 ~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 112 ELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEe
Confidence 55788899999999999999854
No 67
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.60 E-value=4.8e-08 Score=90.54 Aligned_cols=72 Identities=17% Similarity=0.094 Sum_probs=60.7
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCH-------HHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccE
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGND-------AHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDL 73 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~-------~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDv 73 (341)
.||+|..++.+|+ .|. +|+++|+|+ .+++.+++|++.|++. ++++++++|+.+++......+..||+
T Consensus 91 gcG~G~~a~~lA~-~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~----~ri~~~~~d~~~~l~~~~~~~~~fD~ 164 (258)
T 2r6z_A 91 TAGLGRDSFVLAS-LGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTA----ARINLHFGNAAEQMPALVKTQGKPDI 164 (258)
T ss_dssp TCTTCHHHHHHHH-TTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH----TTEEEEESCHHHHHHHHHHHHCCCSE
T ss_pred eCccCHHHHHHHH-hCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCc----cCeEEEECCHHHHHHhhhccCCCccE
Confidence 5899999999998 465 699999999 9999999999998873 35899999999988654221247999
Q ss_pred EEeCC
Q 019408 74 IDIDS 78 (341)
Q Consensus 74 IdlDP 78 (341)
|++||
T Consensus 165 V~~dP 169 (258)
T 2r6z_A 165 VYLDP 169 (258)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99999
No 68
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.59 E-value=1.1e-07 Score=95.69 Aligned_cols=95 Identities=23% Similarity=0.358 Sum_probs=76.0
Q ss_pred CccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
.||+|..++..|... +..+|+++|+|+..++.+++|++.+++. +++++++|+..+.... ...||+|.+||
T Consensus 125 ~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-----nv~~~~~D~~~~~~~~---~~~fD~Il~D~P 196 (479)
T 2frx_A 125 AAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-----NVALTHFDGRVFGAAV---PEMFDAILLDAP 196 (479)
T ss_dssp SCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-----SEEEECCCSTTHHHHS---TTCEEEEEEECC
T ss_pred CCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCCHHHhhhhc---cccCCEEEECCC
Confidence 489999999998753 3468999999999999999999999883 5889999998765322 35799999998
Q ss_pred C-CC------C------------------HHHHHHHHHhcccCCEEEEEec
Q 019408 79 F-GS------D------------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 y-gs------p------------------~~fld~al~~v~~gGlL~vt~T 104 (341)
+ |. | ..+++.|.+.|++||.|.. +|
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvy-sT 246 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVY-ST 246 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE-EE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEE-ec
Confidence 3 21 1 1357788899999999986 45
No 69
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.58 E-value=1.1e-07 Score=85.21 Aligned_cols=96 Identities=16% Similarity=0.180 Sum_probs=78.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++...+..+|+++|+|+..++.+++|++.+++. +++++.++|+...+.... ....||+|++|+ ..
T Consensus 63 ~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~-~~~~fD~I~~~~~~~ 137 (233)
T 2gpy_A 63 TAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE----SRIELLFGDALQLGEKLE-LYPLFDVLFIDAAKG 137 (233)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCGGGSHHHHT-TSCCEEEEEEEGGGS
T ss_pred CCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHHHHHHhcc-cCCCccEEEECCCHH
Confidence 789999999887533568999999999999999999998874 468899999988665431 135799999998 44
Q ss_pred CCHHHHHHHHHhcccCCEEEEE
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt 102 (341)
....+++.+.+.|++||.|++.
T Consensus 138 ~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 138 QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEE
Confidence 4457889999999999999984
No 70
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.58 E-value=5.1e-08 Score=95.31 Aligned_cols=91 Identities=20% Similarity=0.276 Sum_probs=75.5
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.+++ .|+ +|+++|+|+.+++.+++|++.|++ .++++++|+.+... ....||+|+.+| |
T Consensus 241 GcG~G~~~~~la~-~g~-~V~gvDis~~al~~A~~n~~~~~~------~v~~~~~D~~~~~~----~~~~fD~Ii~npp~ 308 (381)
T 3dmg_A 241 GAGYGALTLPLAR-MGA-EVVGVEDDLASVLSLQKGLEANAL------KAQALHSDVDEALT----EEARFDIIVTNPPF 308 (381)
T ss_dssp TCTTSTTHHHHHH-TTC-EEEEEESBHHHHHHHHHHHHHTTC------CCEEEECSTTTTSC----TTCCEEEEEECCCC
T ss_pred eeeCCHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHcCC------CeEEEEcchhhccc----cCCCeEEEEECCch
Confidence 3899999999998 565 899999999999999999999987 36788999986543 135899999998 5
Q ss_pred CC--------CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS--------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs--------p~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ...++..+.+.|++||.|++.+
T Consensus 309 ~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 309 HVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 43 1357788889999999999854
No 71
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.58 E-value=1.8e-07 Score=79.58 Aligned_cols=93 Identities=16% Similarity=0.234 Sum_probs=75.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++...+..+|+++|+|+.+++.+++|++.+++. .++ ++++|+.+.+.. ....||+|+++. +.
T Consensus 34 ~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~-~~~~d~~~~~~~---~~~~~D~i~~~~~~~ 105 (178)
T 3hm2_A 34 GGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS----DRI-AVQQGAPRAFDD---VPDNPDVIFIGGGLT 105 (178)
T ss_dssp TTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT----TSE-EEECCTTGGGGG---CCSCCSEEEECC-TT
T ss_pred CCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC----CCE-EEecchHhhhhc---cCCCCCEEEECCccc
Confidence 799999999988544678999999999999999999988873 367 778888654432 125799999988 44
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
. ..+++.+.+.|++||.|.++.
T Consensus 106 ~-~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 106 A-PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp C-TTHHHHHHHTCCTTCEEEEEE
T ss_pred H-HHHHHHHHHhcCCCCEEEEEe
Confidence 3 478999999999999999854
No 72
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.57 E-value=2.3e-07 Score=88.01 Aligned_cols=96 Identities=19% Similarity=0.187 Sum_probs=77.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH-cC--CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS-IE--RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~-n~--~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|+|..+.+.++..+..+|+++|+|+.+++.+++|+.. |+ ++ ..+++++.+|+.+++... .++||+|++|+
T Consensus 86 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~---~~~v~~~~~D~~~~l~~~---~~~fD~Ii~d~ 159 (314)
T 1uir_A 86 GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD---DPRAVLVIDDARAYLERT---EERYDVVIIDL 159 (314)
T ss_dssp CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG---CTTEEEEESCHHHHHHHC---CCCEEEEEEEC
T ss_pred CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc---CCceEEEEchHHHHHHhc---CCCccEEEECC
Confidence 68999999988754578999999999999999999874 22 21 146899999999987652 45799999998
Q ss_pred CCC-----------CHHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGS-----------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygs-----------p~~fld~al~~v~~gGlL~vt~ 103 (341)
+.. ...|++.+.+.|++||+|++..
T Consensus 160 ~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 160 TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 431 1478889999999999999854
No 73
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.56 E-value=9.4e-08 Score=92.73 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=72.8
Q ss_pred cccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 3 GCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 3 gsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
|+|..++.++. .++ .+|+++|+|+.+++.+++|++.+++. +++++++|+.+.+.. .....||+|++|| |+
T Consensus 181 G~G~~~~~la~-~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~l~~--~~~~~fD~Vi~~~p~~ 252 (373)
T 2qm3_A 181 DDDLTSIALML-SGLPKRIAVLDIDERLTKFIEKAANEIGYE-----DIEIFTFDLRKPLPD--YALHKFDTFITDPPET 252 (373)
T ss_dssp CTTCHHHHHHH-HTCCSEEEEECSCHHHHHHHHHHHHHHTCC-----CEEEECCCTTSCCCT--TTSSCBSEEEECCCSS
T ss_pred CCCHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CEEEEEChhhhhchh--hccCCccEEEECCCCc
Confidence 89999999987 465 79999999999999999999999873 688999999763321 0134799999998 54
Q ss_pred C--CHHHHHHHHHhcccCC-EEEE
Q 019408 81 S--DSSFLRTVFNAVKRDG-LLYL 101 (341)
Q Consensus 81 s--p~~fld~al~~v~~gG-lL~v 101 (341)
. ...|+..+.+.+++|| ++++
T Consensus 253 ~~~~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 253 LEAIRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp HHHHHHHHHHHHHTBCSTTCEEEE
T ss_pred hHHHHHHHHHHHHHcccCCeEEEE
Confidence 2 1367889999999999 4444
No 74
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.56 E-value=2.3e-07 Score=89.17 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=77.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc--CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI--ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n--~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..+++.++..+..+|+++|+|+.+++.+++|+..+ ++. ..+++++++|+.+++... ....||+|++|++
T Consensus 129 ~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~---~~rv~~~~~D~~~~l~~~--~~~~fDlIi~d~~ 203 (334)
T 1xj5_A 129 GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE---DPRVNLVIGDGVAFLKNA--AEGSYDAVIVDSS 203 (334)
T ss_dssp CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---STTEEEEESCHHHHHHTS--CTTCEEEEEECCC
T ss_pred CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCcEEEEECCHHHHHHhc--cCCCccEEEECCC
Confidence 699999999988545679999999999999999999753 331 146899999999987643 2357999999985
Q ss_pred ---CC-----CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 ---GS-----DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 ---gs-----p~~fld~al~~v~~gGlL~vt~ 103 (341)
+. ...|+..+.+.|++||+|++.+
T Consensus 204 ~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 204 DPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 21 1368889999999999999853
No 75
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.54 E-value=2.5e-07 Score=88.40 Aligned_cols=95 Identities=14% Similarity=0.064 Sum_probs=76.5
Q ss_pred ccccHhHHHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAE-AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
+|+|..+.+.++. .++ +|+++|+|+..+++.++|+.++.- .+++++.+|+.+++... ..++||+|++|.|.
T Consensus 98 ~G~G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~-----~rv~v~~~Da~~~l~~~--~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 98 GGACTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRA-----PRVKIRVDDARMVAESF--TPASRDVIIRDVFA 169 (317)
T ss_dssp CGGGHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCT-----TTEEEEESCHHHHHHTC--CTTCEEEEEECCST
T ss_pred CCcCHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCC-----CceEEEECcHHHHHhhc--cCCCCCEEEECCCC
Confidence 6899998888874 355 899999999999999999875432 47899999999998653 23589999999753
Q ss_pred C---C-----HHHHHHHHHhcccCCEEEEEec
Q 019408 81 S---D-----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 s---p-----~~fld~al~~v~~gGlL~vt~T 104 (341)
. + ..|+..+.+.|++||+|.+...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 2 4788999999999999998553
No 76
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.54 E-value=7.8e-08 Score=93.93 Aligned_cols=88 Identities=25% Similarity=0.132 Sum_probs=71.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||||++++.+|+ .||++|+++|.|+ .++.+++|++.|++. ++++++++|+.++ .-+++||+|+-+++|.
T Consensus 92 ~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~n~~~----~~i~~i~~~~~~~-----~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 92 AGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRFNGLE----DRVHVLPGPVETV-----ELPEQVDAIVSEWMGY 160 (376)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHHTTCT----TTEEEEESCTTTC-----CCSSCEEEEECCCCBT
T ss_pred CCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHHcCCC----ceEEEEeeeeeee-----cCCccccEEEeecccc
Confidence 799999999988 7999999999997 679999999999985 6899999998764 2257899999988543
Q ss_pred C-------HHHHHHHHHhcccCCEEE
Q 019408 82 D-------SSFLRTVFNAVKRDGLLY 100 (341)
Q Consensus 82 p-------~~fld~al~~v~~gGlL~ 100 (341)
. ..++.+.-+.|++||++.
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 1 133444447899999987
No 77
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.54 E-value=2.6e-07 Score=86.35 Aligned_cols=96 Identities=22% Similarity=0.224 Sum_probs=77.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcC--CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIE--RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~--~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..+.+.++..+..+|+++|+|+.+++.+++|+..++ ++ ..+++++.+|+.+++... .++||+|++|++
T Consensus 87 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~l~~~---~~~fD~Ii~d~~ 160 (283)
T 2i7c_A 87 GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE---DKRVNVFIEDASKFLENV---TNTYDVIIVDSS 160 (283)
T ss_dssp CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG---STTEEEEESCHHHHHHHC---CSCEEEEEEECC
T ss_pred CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccC---CCcEEEEECChHHHHHhC---CCCceEEEEcCC
Confidence 6899999998875456899999999999999999987542 21 146889999999988653 468999999874
Q ss_pred ---CCC-----HHHHHHHHHhcccCCEEEEEe
Q 019408 80 ---GSD-----SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 ---gsp-----~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+ ..|++.+.+.|++||+|++..
T Consensus 161 ~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 161 DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 211 478889999999999999854
No 78
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.54 E-value=3.2e-08 Score=89.98 Aligned_cols=100 Identities=19% Similarity=0.183 Sum_probs=73.5
Q ss_pred CccccHhHHHHhhh--CCCCEEEEeeCCHHHHHHHHHHHHHc---CCCCCCCcc-------------------------E
Q 019408 1 MCGCGIRSLRYLAE--AKADFVMANDGNDAHRRVILGNLKSI---ERGSGDEKR-------------------------W 50 (341)
Q Consensus 1 fagsG~rgir~a~e--~ga~~V~~~Dis~~A~~~i~~N~~~n---~~~~~~~~~-------------------------~ 50 (341)
.||||..++.++.. .+..+|+++|+|+.+++.+++|+..+ ++. .+ +
T Consensus 59 gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v 134 (250)
T 1o9g_A 59 CCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT----ARELERREQSERFGKPSYLEAAQAARRL 134 (250)
T ss_dssp TCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH----HHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc----ccchhhhhhhhhcccccchhhhhhhhhh
Confidence 48999999999875 23468999999999999999999876 442 11 4
Q ss_pred E-------------EEeccHHHHHHHh-hhcCCcccEEEeCC-CCCC------------HHHHHHHHHhcccCCEEEEEe
Q 019408 51 V-------------VTHFDANRVLSEC-YLKREFFDLIDIDS-FGSD------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 51 ~-------------v~~~DA~~~l~~~-~~~~~~fDvIdlDP-ygsp------------~~fld~al~~v~~gGlL~vt~ 103 (341)
+ +.++|+.+.+... ...+.+||+|+.+| |... ..++..+.+.|++||+|+++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 135 RERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeC
Confidence 4 7888987643210 00234799999998 5421 167788889999999999844
Q ss_pred c
Q 019408 104 T 104 (341)
Q Consensus 104 T 104 (341)
.
T Consensus 215 ~ 215 (250)
T 1o9g_A 215 R 215 (250)
T ss_dssp S
T ss_pred c
Confidence 3
No 79
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.53 E-value=5.6e-08 Score=90.28 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=64.1
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc-------C-CCCCCCccEEEEeccHHHHHHHhhhcCCccc
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI-------E-RGSGDEKRWVVTHFDANRVLSECYLKREFFD 72 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n-------~-~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fD 72 (341)
+||+|..++.+|+ +|+ +|+++|+|+..++++++|++.. + +. .+++++++|+.++|.... ..||
T Consensus 96 ~~G~G~dal~lA~-~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~----~~i~~~~~D~~~~L~~~~---~~fD 166 (258)
T 2oyr_A 96 TAGLGRDAFVLAS-VGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQ----ERLQLIHASSLTALTDIT---PRPQ 166 (258)
T ss_dssp TCTTCHHHHHHHH-HTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHH----HHEEEEESCHHHHSTTCS---SCCS
T ss_pred CCcCCHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhh----cCEEEEECCHHHHHHhCc---ccCC
Confidence 6899999999998 577 5999999999999999888642 2 21 368999999999886532 3699
Q ss_pred EEEeCC-CCCC--HHHHHHHHHhcccCC
Q 019408 73 LIDIDS-FGSD--SSFLRTVFNAVKRDG 97 (341)
Q Consensus 73 vIdlDP-ygsp--~~fld~al~~v~~gG 97 (341)
+|++|| |..+ ++.+...++.++..+
T Consensus 167 vV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred EEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 999999 6432 234445556665533
No 80
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.53 E-value=2.6e-07 Score=89.95 Aligned_cols=96 Identities=17% Similarity=0.148 Sum_probs=75.7
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.+++.....+|+++|+|+.+++.+++|++.|++. +..++++...|+.+.+ ...+||+|++|| |
T Consensus 230 GcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~--~~~~v~~~~~D~~~~~-----~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 230 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE--ALDRCEFMINNALSGV-----EPFRFNAVLCNPPF 302 (375)
T ss_dssp TCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG--GGGGEEEEECSTTTTC-----CTTCEEEEEECCCC
T ss_pred eCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC--cCceEEEEechhhccC-----CCCCeeEEEECCCc
Confidence 4899999999998532578999999999999999999999863 1124778999987632 245899999998 5
Q ss_pred CCC--------HHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSD--------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp--------~~fld~al~~v~~gGlL~vt~ 103 (341)
... ..++..+.+.|++||.|++..
T Consensus 303 h~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 303 HQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp -------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 421 146788899999999999854
No 81
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.52 E-value=8.4e-08 Score=87.38 Aligned_cols=93 Identities=11% Similarity=0.127 Sum_probs=75.3
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
+|||..+|.+++. | +.+|+++|+|+.+++.+++|++.|++. +++++.++|+++.+.. +..||+|++-=-|
T Consensus 24 tGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~----~~i~~~~~d~l~~l~~----~~~~D~IviaG~G 94 (225)
T 3kr9_A 24 SDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFEE----TDQVSVITIAGMG 94 (225)
T ss_dssp CSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCG----GGCCCEEEEEEEC
T ss_pred CCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECchhhhccc----CcCCCEEEEcCCC
Confidence 7999999999995 5 678999999999999999999999985 5799999998765421 2369988874333
Q ss_pred CC--HHHHHHHHHhcccCCEEEEEe
Q 019408 81 SD--SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp--~~fld~al~~v~~gGlL~vt~ 103 (341)
.. ..+++.+...++++|.|.+..
T Consensus 95 g~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 95 GRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp HHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 32 367788888999999999843
No 82
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.52 E-value=9.1e-08 Score=87.85 Aligned_cols=88 Identities=15% Similarity=0.063 Sum_probs=72.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||||..++.+++ .|+ +|+++|+|+.+++.+++|++.|++ . +++.++|+.+.+. ..+||+|+.++...
T Consensus 129 cG~G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~-----~-v~~~~~d~~~~~~-----~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 129 TGSGVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGV-----R-PRFLEGSLEAALP-----FGPFDLLVANLYAE 195 (254)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTC-----C-CEEEESCHHHHGG-----GCCEEEEEEECCHH
T ss_pred CCCcHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCC-----c-EEEEECChhhcCc-----CCCCCEEEECCcHH
Confidence 799999999887 688 999999999999999999999987 3 6788999987531 34799999987321
Q ss_pred -CHHHHHHHHHhcccCCEEEEE
Q 019408 82 -DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 -p~~fld~al~~v~~gGlL~vt 102 (341)
...++..+.+.+++||.|+++
T Consensus 196 ~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 196 LHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEEE
Confidence 235667788899999999984
No 83
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.52 E-value=6.1e-08 Score=87.20 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=70.8
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.++. .| .+|+++|+|+.+++.+++|++.+++. .+++++++|+.++.. ...||+|++|| |
T Consensus 86 gcG~G~~~~~la~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~-----~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 86 FCGVGGNTIQFAL-TG-MRVIAIDIDPVKIALARNNAEVYGIA----DKIEFICGDFLLLAS-----FLKADVVFLSPPW 154 (241)
T ss_dssp TCTTSHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHGG-----GCCCSEEEECCCC
T ss_pred ccccCHHHHHHHH-cC-CEEEEEECCHHHHHHHHHHHHHcCCC----cCeEEEECChHHhcc-----cCCCCEEEECCCc
Confidence 4899999999998 56 78999999999999999999999873 478999999998752 35899999999 6
Q ss_pred CCCHH---HHHHHHHhcccCCEEEE
Q 019408 80 GSDSS---FLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 80 gsp~~---fld~al~~v~~gGlL~v 101 (341)
..... .+....+.+++||++.+
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CCcchhhhHHHHHHhhcCCcceeHH
Confidence 54311 12233456788888665
No 84
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.51 E-value=1.6e-07 Score=91.82 Aligned_cols=96 Identities=7% Similarity=0.075 Sum_probs=70.7
Q ss_pred CccccHhHHHHhhhCCC---------------------------------------CEEEEeeCCHHHHHHHHHHHHHcC
Q 019408 1 MCGCGIRSLRYLAEAKA---------------------------------------DFVMANDGNDAHRRVILGNLKSIE 41 (341)
Q Consensus 1 fagsG~rgir~a~e~ga---------------------------------------~~V~~~Dis~~A~~~i~~N~~~n~ 41 (341)
|||||.+.|++|.- +. .+|+++|+|+.+++.+++|++.++
T Consensus 202 ~CGSGt~lIEAa~~-a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~g 280 (384)
T 3ldg_A 202 TCGSGTFCIEAAMI-GMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVG 280 (384)
T ss_dssp TCTTSHHHHHHHHH-HTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHH-hcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcC
Confidence 79999999999973 32 259999999999999999999999
Q ss_pred CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CCCCH-------HHHHHHHHhcc--cCCEEEEEecCC
Q 019408 42 RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FGSDS-------SFLRTVFNAVK--RDGLLYLTSTDG 106 (341)
Q Consensus 42 ~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygsp~-------~fld~al~~v~--~gGlL~vt~TD~ 106 (341)
+. +.+++.++|+.++.. ...||+|+.|| ||.-. .+....-+.++ +||-+++-++|.
T Consensus 281 l~----~~I~~~~~D~~~l~~-----~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 281 LE----DVVKLKQMRLQDFKT-----NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp CT----TTEEEEECCGGGCCC-----CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred CC----CceEEEECChHHCCc-----cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 85 568999999987532 34799999999 87421 12222223344 377777655443
No 85
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.51 E-value=2e-07 Score=86.11 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=77.0
Q ss_pred CccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 1 MCGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 1 fagsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
.||||..++.+++..+ ..+|+++|+|+.+++.+++|++.+++. .++++.++|+.+.+ ....||+|++||.
T Consensus 120 G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~-----~~~~~D~V~~~~~ 190 (277)
T 1o54_A 120 GVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI----ERVTIKVRDISEGF-----DEKDVDALFLDVP 190 (277)
T ss_dssp CCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG----GGEEEECCCGGGCC-----SCCSEEEEEECCS
T ss_pred CCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHHHcc-----cCCccCEEEECCc
Confidence 3799999999988534 578999999999999999999988873 46889999987652 2347999999983
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
. +..+++.+.+.|++||.|++..
T Consensus 191 ~-~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 191 D-PWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp C-GGGTHHHHHHHEEEEEEEEEEE
T ss_pred C-HHHHHHHHHHHcCCCCEEEEEe
Confidence 2 4478899999999999999854
No 86
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.50 E-value=2.5e-07 Score=79.13 Aligned_cols=91 Identities=15% Similarity=0.205 Sum_probs=74.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCc-cEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEK-RWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~-~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++.++.. ..+|+++|+|+.+++.+++|++.+++. + ++++.+.|+.+.+. ...||+|+++| |
T Consensus 61 ~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~~~~~~~~d~~~~~~-----~~~~D~v~~~~~~ 129 (194)
T 1dus_A 61 CGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLD----NYDIRVVHSDLYENVK-----DRKYNKIITNPPI 129 (194)
T ss_dssp CTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCT----TSCEEEEECSTTTTCT-----TSCEEEEEECCCS
T ss_pred CCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECchhcccc-----cCCceEEEECCCc
Confidence 7999999999884 568999999999999999999988873 2 38899999876432 45799999998 5
Q ss_pred CCC----HHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSD----SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp----~~fld~al~~v~~gGlL~vt~ 103 (341)
... ..+++.+.+.|++||.++++.
T Consensus 130 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 130 RAGKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp TTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 431 356778888999999999854
No 87
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.50 E-value=1.6e-07 Score=82.21 Aligned_cols=92 Identities=11% Similarity=0.061 Sum_probs=77.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++...+..+|+++|+|+.+++.+++|++.+++. .+++.++|+.++. ....||+|+...+..
T Consensus 74 ~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~-----~~~~~D~i~~~~~~~ 143 (207)
T 1jsx_A 74 TGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-----NIEPVQSRVEEFP-----SEPPFDGVISRAFAS 143 (207)
T ss_dssp CTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-----SEEEEECCTTTSC-----CCSCEEEEECSCSSS
T ss_pred CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEecchhhCC-----ccCCcCEEEEeccCC
Confidence 799999999987544568999999999999999999998873 4889999997643 235799999988776
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
...+++.+.+.|++||.+++..
T Consensus 144 ~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 144 LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp HHHHHHHHTTSEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEe
Confidence 6678889999999999999853
No 88
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.49 E-value=2.8e-07 Score=83.56 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=76.9
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. +++++.++|+.+.+ ....||+|++||-.
T Consensus 102 ~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~-----~~~~~D~v~~~~~~ 172 (255)
T 3mb5_A 102 VGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD----DRVTIKLKDIYEGI-----EEENVDHVILDLPQ 172 (255)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT----TTEEEECSCGGGCC-----CCCSEEEEEECSSC
T ss_pred CCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC----CceEEEECchhhcc-----CCCCcCEEEECCCC
Confidence 799999999988523 678999999999999999999999874 45899999998542 23579999999833
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+++.+.+.|++||.+++..
T Consensus 173 -~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 173 -PERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp -GGGGHHHHHHHEEEEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEEE
Confidence 3468999999999999999854
No 89
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.49 E-value=1.2e-07 Score=86.71 Aligned_cols=130 Identities=12% Similarity=0.112 Sum_probs=93.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|||..+|.++++..+.+|+++|+|+.+++.+++|++.|++. +++++.++|+.+.+.. ++.||+|++-=-|.
T Consensus 30 tGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~----~~I~~~~gD~l~~~~~----~~~~D~IviaGmGg 101 (230)
T 3lec_A 30 SDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT----SKIDVRLANGLSAFEE----ADNIDTITICGMGG 101 (230)
T ss_dssp CSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCG----GGCCCEEEEEEECH
T ss_pred CchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECchhhcccc----ccccCEEEEeCCch
Confidence 799999999998522678999999999999999999999985 6799999998876532 23699998755443
Q ss_pred --CHHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhcCCcEEEEEe
Q 019408 82 --DSSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFS 159 (341)
Q Consensus 82 --p~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i~Pl~s 159 (341)
-..+++.+...++++|.|.+.. .. + ...+.+...++|..|.=-.-
T Consensus 102 ~lI~~IL~~~~~~l~~~~~lIlqp--------~~---------------------~----~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 102 RLIADILNNDIDKLQHVKTLVLQP--------NN---------------------R----EDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp HHHHHHHHHTGGGGTTCCEEEEEE--------SS---------------------C----HHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCcCCEEEEEC--------CC---------------------C----hHHHHHHHHHCCCEEEEEEE
Confidence 2366778888899999998733 11 1 23444555667766655333
Q ss_pred cccCCCCeEEEEEE
Q 019408 160 YYSYHGPVFRVMLR 173 (341)
Q Consensus 160 ~~~~~dhy~Rv~vr 173 (341)
.. ..++||.+++-
T Consensus 149 v~-e~~~~Yeii~~ 161 (230)
T 3lec_A 149 LT-ENDKRYEILVV 161 (230)
T ss_dssp EE-C--CEEEEEEE
T ss_pred EE-ECCEEEEEEEE
Confidence 22 36889988654
No 90
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.49 E-value=1.9e-07 Score=90.64 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=70.3
Q ss_pred CccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
+||||..+++++. .+. .+|+++|+|+.+++.+++|++.+++. +.+++.++|+.++.. ....||+|+.||
T Consensus 225 gCGsG~~~i~~a~-~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~----~~i~~~~~D~~~~~~----~~~~fD~Ii~npP 295 (373)
T 3tm4_A 225 MCGSGTILIELAL-RRYSGEIIGIEKYRKHLIGAEMNALAAGVL----DKIKFIQGDATQLSQ----YVDSVDFAISNLP 295 (373)
T ss_dssp TCTTCHHHHHHHH-TTCCSCEEEEESCHHHHHHHHHHHHHTTCG----GGCEEEECCGGGGGG----TCSCEEEEEEECC
T ss_pred cCcCcHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChhhCCc----ccCCcCEEEECCC
Confidence 6899999999998 454 37999999999999999999999884 578899999987532 235799999998
Q ss_pred CCCC-----------HHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSD-----------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp-----------~~fld~al~~v~~gGlL~vt~ 103 (341)
||.- ..+++.+.+.+ .|+++.+++
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~ 330 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITT 330 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE-EEEEEEEES
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEEC
Confidence 7742 23445555556 455555533
No 91
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.49 E-value=2.8e-07 Score=83.72 Aligned_cols=99 Identities=14% Similarity=0.174 Sum_probs=74.6
Q ss_pred CccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHc--------CCCCCCCccEEEEeccHHHHHHHhhhcCCcc
Q 019408 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSI--------ERGSGDEKRWVVTHFDANRVLSECYLKREFF 71 (341)
Q Consensus 1 fagsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n--------~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~f 71 (341)
.||+|..++.++.. +. ..|+++|+|+.+++.+++|++.+ ++ .+++++++|+.+.|.... ....+
T Consensus 57 GcG~G~~~~~la~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-----~nv~~~~~D~~~~l~~~~-~~~~~ 129 (246)
T 2vdv_E 57 GCGFGGLMIDLSPA-FPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-----QNINVLRGNAMKFLPNFF-EKGQL 129 (246)
T ss_dssp TCTTSHHHHHHHHH-STTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-----TTEEEEECCTTSCGGGTS-CTTCE
T ss_pred cCCCCHHHHHHHHh-CCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-----CcEEEEeccHHHHHHHhc-ccccc
Confidence 48999999999984 54 48999999999999999999987 65 368899999987654322 23467
Q ss_pred cEEEe---CCCCCC---------HHHHHHHHHhcccCCEEEEEecCCC
Q 019408 72 DLIDI---DSFGSD---------SSFLRTVFNAVKRDGLLYLTSTDGY 107 (341)
Q Consensus 72 DvIdl---DPygsp---------~~fld~al~~v~~gGlL~vt~TD~~ 107 (341)
|.|++ ||+-.. ..++..+.+.|++||+|.+ .||..
T Consensus 130 d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~-~td~~ 176 (246)
T 2vdv_E 130 SKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT-ITDVK 176 (246)
T ss_dssp EEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE-EESCH
T ss_pred CEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE-EeccH
Confidence 76643 343110 3789999999999999998 55543
No 92
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.46 E-value=1.8e-07 Score=91.49 Aligned_cols=71 Identities=17% Similarity=0.159 Sum_probs=60.2
Q ss_pred CccccHhHHHHhhhCCC---------------------------------------CEEEEeeCCHHHHHHHHHHHHHcC
Q 019408 1 MCGCGIRSLRYLAEAKA---------------------------------------DFVMANDGNDAHRRVILGNLKSIE 41 (341)
Q Consensus 1 fagsG~rgir~a~e~ga---------------------------------------~~V~~~Dis~~A~~~i~~N~~~n~ 41 (341)
|||||.+.|++|.- ++ .+|+.+|+|+.+++.+++|++.++
T Consensus 203 ~CGSGt~lieaa~~-~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~g 281 (385)
T 3ldu_A 203 MCGSGTILIEAAMI-GINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAG 281 (385)
T ss_dssp TCTTCHHHHHHHHH-HTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH-HhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcC
Confidence 79999999999874 32 369999999999999999999999
Q ss_pred CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CCC
Q 019408 42 RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FGS 81 (341)
Q Consensus 42 ~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygs 81 (341)
+. +.+++.++|+.++.. ...||+|+.|| ||.
T Consensus 282 l~----~~i~~~~~D~~~l~~-----~~~~D~Iv~NPPyg~ 313 (385)
T 3ldu_A 282 VD----EYIEFNVGDATQFKS-----EDEFGFIITNPPYGE 313 (385)
T ss_dssp CG----GGEEEEECCGGGCCC-----SCBSCEEEECCCCCC
T ss_pred CC----CceEEEECChhhcCc-----CCCCcEEEECCCCcC
Confidence 84 578999999987532 35799999999 874
No 93
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.44 E-value=6e-07 Score=84.75 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=75.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc--CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI--ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n--~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..+.+.++..+..+|+++|+|+.+++.+++|+... +.. ..+++++.+|+.+++... ..++||+|++|++
T Consensus 104 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~--~~~~fDvIi~d~~ 178 (304)
T 3bwc_A 104 GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLA---DPRATVRVGDGLAFVRQT--PDNTYDVVIIDTT 178 (304)
T ss_dssp CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHHSS--CTTCEEEEEEECC
T ss_pred CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHHhc--cCCceeEEEECCC
Confidence 689999999987445689999999999999999998531 111 146889999999987531 2458999999983
Q ss_pred CC--C------HHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS--D------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs--p------~~fld~al~~v~~gGlL~vt~ 103 (341)
-. | ..|+..+.+.|++||+|++..
T Consensus 179 ~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 179 DPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp ---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 21 1 478888999999999999864
No 94
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.44 E-value=3.4e-07 Score=83.03 Aligned_cols=91 Identities=16% Similarity=0.061 Sum_probs=73.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|+|..+..+++ .+..+|+.+|+|+..++.++++.+..+. .++++.+|+..++... ....||.|+.|++.+
T Consensus 69 ~G~G~~~~~~~~-~~~~~v~~id~~~~~~~~a~~~~~~~~~------~~~~~~~~a~~~~~~~--~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 69 FGMAIAASKVQE-APIDEHWIIECNDGVFQRLRDWAPRQTH------KVIPLKGLWEDVAPTL--PDGHFDGILYDTYPL 139 (236)
T ss_dssp CTTSHHHHHHTT-SCEEEEEEEECCHHHHHHHHHHGGGCSS------EEEEEESCHHHHGGGS--CTTCEEEEEECCCCC
T ss_pred CCccHHHHHHHH-hCCcEEEEEeCCHHHHHHHHHHHhhCCC------ceEEEeehHHhhcccc--cccCCceEEEeeeec
Confidence 689998888876 5567899999999999999999987654 5778999999887543 345799999999643
Q ss_pred ---------CHHHHHHHHHhcccCCEEEE
Q 019408 82 ---------DSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 82 ---------p~~fld~al~~v~~gGlL~v 101 (341)
+..+++.+.+.||+||.|.+
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 12456778899999999986
No 95
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.44 E-value=2.5e-07 Score=90.71 Aligned_cols=71 Identities=10% Similarity=0.183 Sum_probs=59.8
Q ss_pred CccccHhHHHHhhhCCC---------------------------------------CEEEEeeCCHHHHHHHHHHHHHcC
Q 019408 1 MCGCGIRSLRYLAEAKA---------------------------------------DFVMANDGNDAHRRVILGNLKSIE 41 (341)
Q Consensus 1 fagsG~rgir~a~e~ga---------------------------------------~~V~~~Dis~~A~~~i~~N~~~n~ 41 (341)
|||||.+.|++|.- +. .+|+++|+|+.+++.+++|++.++
T Consensus 209 ~CGSGt~~ieaa~~-~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~g 287 (393)
T 3k0b_A 209 VCGSGTIPIEAALI-GQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG 287 (393)
T ss_dssp TCTTSHHHHHHHHH-HTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHH-hcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcC
Confidence 79999999999974 32 359999999999999999999999
Q ss_pred CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CCC
Q 019408 42 RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FGS 81 (341)
Q Consensus 42 ~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygs 81 (341)
+. +.+++.++|+.++.. ...||+|+.|| ||.
T Consensus 288 l~----~~I~~~~~D~~~~~~-----~~~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 288 LG----DLITFRQLQVADFQT-----EDEYGVVVANPPYGE 319 (393)
T ss_dssp CT----TCSEEEECCGGGCCC-----CCCSCEEEECCCCCC
T ss_pred CC----CceEEEECChHhCCC-----CCCCCEEEECCCCcc
Confidence 84 468899999987532 34799999998 875
No 96
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.43 E-value=2e-07 Score=85.88 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=74.4
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||||..+|.++++ | +.+|+++|+|+.+++.+++|++.|++. +++++.++|..+.+.. ++.||+|++-=-|
T Consensus 30 tGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~----~~I~v~~gD~l~~~~~----~~~~D~IviagmG 100 (244)
T 3gnl_A 30 SDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIEK----KDAIDTIVIAGMG 100 (244)
T ss_dssp CSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCG----GGCCCEEEEEEEC
T ss_pred CccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEecchhhccCc----cccccEEEEeCCc
Confidence 7999999999985 5 678999999999999999999999985 5799999998875531 2369999874333
Q ss_pred C--CHHHHHHHHHhcccCCEEEEE
Q 019408 81 S--DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 s--p~~fld~al~~v~~gGlL~vt 102 (341)
. -..+++.+...+++++.|.+.
T Consensus 101 g~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 101 GTLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp HHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEE
Confidence 2 236677888888889998883
No 97
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.42 E-value=5.7e-07 Score=85.45 Aligned_cols=72 Identities=13% Similarity=-0.027 Sum_probs=58.1
Q ss_pred CccccHhHHHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAE-AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.||+|..++.+|.. .+..+|+++|+|+..++.+++|++.+++. +++++++|+.++.... .....||.|++||
T Consensus 110 caG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-----~v~~~~~D~~~~~~~~-~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 110 CAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-----CCELAEEDFLAVSPSD-PRYHEVHYILLDP 182 (309)
T ss_dssp SCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCGGGSCTTC-GGGTTEEEEEECC
T ss_pred CCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----eEEEEeCChHhcCccc-cccCCCCEEEEcC
Confidence 48999999999875 34578999999999999999999999883 6889999997653211 0114699999998
No 98
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.42 E-value=5.6e-07 Score=80.82 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=75.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.+++. ..+|+++|+|+.+++.+++|++.+++. .++++.+.|+.+.+ .....||+|++||- .
T Consensus 100 ~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~----~~~~~~D~v~~~~~-~ 168 (248)
T 2yvl_A 100 TGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLG----KNVKFFNVDFKDAE----VPEGIFHAAFVDVR-E 168 (248)
T ss_dssp CTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCC----TTEEEECSCTTTSC----CCTTCBSEEEECSS-C
T ss_pred CCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCC----CcEEEEEcChhhcc----cCCCcccEEEECCc-C
Confidence 7999999999984 568999999999999999999988873 46788999987632 12357999999984 3
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+++.+.+.|++||.+++..
T Consensus 169 ~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 169 PWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp GGGGHHHHHHHBCTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEe
Confidence 4578899999999999999854
No 99
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.41 E-value=2.3e-06 Score=72.51 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=71.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++. ...+|+++|+|+.+++.+++|++.+++. ++++.++|+.+.+. ...||+|++++...
T Consensus 44 ~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~~-----~~~~D~i~~~~~~~ 111 (183)
T 2yxd_A 44 CGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIK-----NCQIIKGRAEDVLD-----KLEFNKAFIGGTKN 111 (183)
T ss_dssp CCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCC-----SEEEEESCHHHHGG-----GCCCSEEEECSCSC
T ss_pred CCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEEECCcccccc-----CCCCcEEEECCccc
Confidence 799999999987 5578999999999999999999998873 68899999987432 24799999998533
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+..++..+.+. +||.++++.
T Consensus 112 ~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 112 IEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp HHHHHHHHHHT--TCCEEEEEE
T ss_pred HHHHHHHHhhC--CCCEEEEEe
Confidence 44566665555 999999854
No 100
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.40 E-value=3e-07 Score=87.93 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=74.9
Q ss_pred CccccHhHHHHhhhCCC-----CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEE
Q 019408 1 MCGCGIRSLRYLAEAKA-----DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLID 75 (341)
Q Consensus 1 fagsG~rgir~a~e~ga-----~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvId 75 (341)
.||||.+.+.++..... .+|+++|+|+.++++++.|+..+++ .+.+.++|+.... ...+||+|+
T Consensus 138 ~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~------~~~i~~~D~l~~~-----~~~~fD~Ii 206 (344)
T 2f8l_A 138 ACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ------KMTLLHQDGLANL-----LVDPVDVVI 206 (344)
T ss_dssp TCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCTTSCC-----CCCCEEEEE
T ss_pred CCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC------CceEEECCCCCcc-----ccCCccEEE
Confidence 38999999999875221 5799999999999999999998876 3568899986521 235799999
Q ss_pred eCC-CCCC---------------------HHHHHHHHHhcccCCEEEEEecC
Q 019408 76 IDS-FGSD---------------------SSFLRTVFNAVKRDGLLYLTSTD 105 (341)
Q Consensus 76 lDP-ygsp---------------------~~fld~al~~v~~gGlL~vt~TD 105 (341)
.+| ||.- ..|+..+++.|++||.+++..++
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 998 6531 15889999999999999986653
No 101
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.40 E-value=7.3e-08 Score=84.55 Aligned_cols=89 Identities=17% Similarity=0.087 Sum_probs=71.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++. .+..+|+++|+|+.+++.+++|++.+++. .+++.++|+.... ...||+|+.++ +.
T Consensus 69 ~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~------~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 69 TGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIY-----DIALQKTSLLADV------DGKFDLIVANILAE 136 (205)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCC-----CCEEEESSTTTTC------CSCEEEEEEESCHH
T ss_pred CCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEeccccccC------CCCceEEEECCcHH
Confidence 799999999876 67889999999999999999999998874 3788999986532 35899999998 11
Q ss_pred CCHHHHHHHHHhcccCCEEEEE
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt 102 (341)
....++..+.+.|++||.|+++
T Consensus 137 ~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 137 ILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp HHHHHGGGSGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEE
Confidence 1123345556789999999984
No 102
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.38 E-value=8.3e-07 Score=82.56 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=67.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeC-CHHHHHHHHHHHHHc-----CCCCCCCccEEEEecc----HHHHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDG-NDAHRRVILGNLKSI-----ERGSGDEKRWVVTHFD----ANRVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Di-s~~A~~~i~~N~~~n-----~~~~~~~~~~~v~~~D----A~~~l~~~~~~~~~f 71 (341)
||||..++.+++ .|+.+|+++|+ |+.+++.+++|++.| ++..+...++++...| ...+.... ....|
T Consensus 88 ~G~G~~~~~~a~-~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~f 164 (281)
T 3bzb_A 88 AGAGLVSIVAFL-AGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT--GLQRF 164 (281)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH--SCSSB
T ss_pred ccccHHHHHHHH-cCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc--cCCCC
Confidence 799999998887 58889999999 899999999999544 3310000145666333 22332211 24579
Q ss_pred cEEEe-CC-CCC--CHHHHHHHHHhcc---c--CCEEEEEec
Q 019408 72 DLIDI-DS-FGS--DSSFLRTVFNAVK---R--DGLLYLTST 104 (341)
Q Consensus 72 DvIdl-DP-ygs--p~~fld~al~~v~---~--gGlL~vt~T 104 (341)
|+|++ |+ |.. ...++..+.++|+ + ||.+++..+
T Consensus 165 D~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 165 QVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp SEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred CEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 99987 98 433 2356777778899 8 998887554
No 103
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.37 E-value=5.7e-07 Score=88.84 Aligned_cols=95 Identities=23% Similarity=0.267 Sum_probs=74.9
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++..+...+..+|+++|+|+..++.+++|++.+++ .++++++|+..+.... .+..||+|++|| +
T Consensus 254 gaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~------~~~~~~~D~~~~~~~~--~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 254 CAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM------KATVKQGDGRYPSQWC--GEQQFDRILLDAPC 325 (429)
T ss_dssp SCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC------CCEEEECCTTCTHHHH--TTCCEEEEEEECCC
T ss_pred CCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC------CeEEEeCchhhchhhc--ccCCCCEEEEeCCC
Confidence 389999999998753336899999999999999999999887 2578899987764322 235799999998 3
Q ss_pred -CC------C------------------HHHHHHHHHhcccCCEEEEEec
Q 019408 80 -GS------D------------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 -gs------p------------------~~fld~al~~v~~gGlL~vt~T 104 (341)
|+ | ..+++.+.+.|++||.|.+ +|
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvy-st 374 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY-AT 374 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEE-EE
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE-EE
Confidence 21 1 2567889999999999987 45
No 104
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.36 E-value=1.3e-07 Score=85.88 Aligned_cols=76 Identities=11% Similarity=0.025 Sum_probs=58.6
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH-HHHhhhc-CCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV-LSECYLK-REFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~-l~~~~~~-~~~fDvIdlDP 78 (341)
.||||..++.++......+|+++|+|+.+++.+++|++.+++. ++++++++|+.+. +...... ...||+|+.||
T Consensus 73 G~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~np 148 (254)
T 2h00_A 73 GTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS----DLIKVVKVPQKTLLMDALKEESEIIYDFCMCNP 148 (254)
T ss_dssp SCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTCSSTTTSTTCCSCCBSEEEECC
T ss_pred CCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC----ccEEEEEcchhhhhhhhhhcccCCcccEEEECC
Confidence 3799999999987532468999999999999999999999884 4689999998652 2212111 14799999998
Q ss_pred -CC
Q 019408 79 -FG 80 (341)
Q Consensus 79 -yg 80 (341)
|.
T Consensus 149 p~~ 151 (254)
T 2h00_A 149 PFF 151 (254)
T ss_dssp CCC
T ss_pred CCc
Confidence 54
No 105
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.35 E-value=8.8e-07 Score=81.81 Aligned_cols=91 Identities=11% Similarity=0.123 Sum_probs=75.0
Q ss_pred ccccHhHHHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAE-AKADFVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
||+|..++.++.. ....+|+++|+|+.+++.+++|++.+ +. .++++.++|+.+.+ ....||+|++|+.
T Consensus 119 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~~~~-----~~~~fD~Vi~~~~ 188 (275)
T 1yb2_A 119 VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-----GNVRTSRSDIADFI-----SDQMYDAVIADIP 188 (275)
T ss_dssp CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-----TTEEEECSCTTTCC-----CSCCEEEEEECCS
T ss_pred CCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-----CcEEEEECchhccC-----cCCCccEEEEcCc
Confidence 7999999999874 23568999999999999999999988 75 36888999987622 2357999999984
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
. +..+++.+.+.|++||.|++..
T Consensus 189 ~-~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 189 D-PWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp C-GGGSHHHHHHTEEEEEEEEEEE
T ss_pred C-HHHHHHHHHHHcCCCCEEEEEe
Confidence 3 3478899999999999999844
No 106
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.33 E-value=4.8e-06 Score=74.61 Aligned_cols=92 Identities=16% Similarity=0.083 Sum_probs=71.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++...|..+|+++|+|+.+++.+++|++.+ .+++++.+|+......... ...||+|+.|+..
T Consensus 83 cG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~-~~~~D~v~~~~~~- 153 (230)
T 1fbn_A 83 ASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-------ENIIPILGDANKPQEYANI-VEKVDVIYEDVAQ- 153 (230)
T ss_dssp CCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-------TTEEEEECCTTCGGGGTTT-SCCEEEEEECCCS-
T ss_pred ccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-------CCeEEEECCCCCccccccc-CccEEEEEEecCC-
Confidence 799999999988546678999999999999999998755 2577889998752110111 2579999999732
Q ss_pred C---HHHHHHHHHhcccCCEEEEE
Q 019408 82 D---SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p---~~fld~al~~v~~gGlL~vt 102 (341)
+ ..++..+.+.|++||.++++
T Consensus 154 ~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 154 PNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHhCCCCcEEEEE
Confidence 3 45688889999999999985
No 107
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.32 E-value=3.1e-06 Score=74.70 Aligned_cols=162 Identities=12% Similarity=0.016 Sum_probs=96.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++...+..+|+++|+|+.+++.+++|++.+++......++++.++|+.. .......||+|+..- +
T Consensus 38 cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~v~~~~~l~ 113 (217)
T 3jwh_A 38 CGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY----QDKRFHGYDAATVIEVIE 113 (217)
T ss_dssp CTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS----CCGGGCSCSEEEEESCGG
T ss_pred CCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc----ccccCCCcCEEeeHHHHH
Confidence 7999999998874344789999999999999999998777630000168889999732 112235799998654 1
Q ss_pred --CCC--HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhcccc----CCCCCchhhhHHHHHHHHHHHHHhcC
Q 019408 80 --GSD--SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYI----LPMPYSNEIGLRMLIGGAVREASAQG 151 (341)
Q Consensus 80 --gsp--~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~----~~~~~~~E~~lR~ll~~i~~~Aa~~~ 151 (341)
..+ ..++..+.+.|++||++.++-.. . -...|...+ .......+.....+...+.+.+.++|
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~li~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G 183 (217)
T 3jwh_A 114 HLDLSRLGAFERVLFEFAQPKIVIVTTPNI------E----YNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFA 183 (217)
T ss_dssp GCCHHHHHHHHHHHHTTTCCSEEEEEEEBH------H----HHHHTC-----------CCSCBCHHHHHHHHHHHHHHSS
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEEccCc------c----cchhhcccccccccccccccccCHHHHHHHHHHHHHHcC
Confidence 112 36677888899999987765320 0 001111111 01122233455566667778888887
Q ss_pred CcEEEEEecc--cCCCCeEEEEEEEEeC
Q 019408 152 YHVSPLFSYY--SYHGPVFRVMLRVHRK 177 (341)
Q Consensus 152 ~~i~Pl~s~~--~~~dhy~Rv~vrv~~~ 177 (341)
..++-.-.-. ...+++..+..-+++|
T Consensus 184 f~v~~~~~g~~~~~~g~~~q~~~~~~~~ 211 (217)
T 3jwh_A 184 YNVQFQPIGEADPEVGSPTQMAVFIHRG 211 (217)
T ss_dssp EEEEECCCSCCCSSSCCSEEEEEEEECC
T ss_pred ceEEEEecCCccCCCCchheeEeeeecc
Confidence 5543221111 1134555555555554
No 108
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.31 E-value=3.2e-06 Score=74.55 Aligned_cols=145 Identities=16% Similarity=0.068 Sum_probs=87.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++...+..+|+++|+|+.+++.+++|+..+++......++++.++|+... ......||+|+..-
T Consensus 38 cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~V~~~~~l~ 113 (219)
T 3jwg_A 38 CGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR----DKRFSGYDAATVIEVIE 113 (219)
T ss_dssp CTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC----CGGGTTCSEEEEESCGG
T ss_pred CCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc----ccccCCCCEEEEHHHHH
Confidence 79999999988743347899999999999999999988776300001678899997321 12235799998543
Q ss_pred -CCCC--HHHHHHHHHhcccCCEEEEEecC-CCCCCCCCchhHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhcCCcE
Q 019408 79 -FGSD--SSFLRTVFNAVKRDGLLYLTSTD-GYSSGGHRPNNSLASYGAYILPMPYSNEIGLRMLIGGAVREASAQGYHV 154 (341)
Q Consensus 79 -ygsp--~~fld~al~~v~~gGlL~vt~TD-~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i 154 (341)
+..+ ..++..+.+.|++||++.++-.. -....+..+...++ ......+.....+...+.+.+.++|..+
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 114 HLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLR-------HRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp GCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----G-------GGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred hCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCccccc-------ccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 1112 36778888999999977764321 11111111111111 0111223445556666667777777655
Q ss_pred EEE
Q 019408 155 SPL 157 (341)
Q Consensus 155 ~Pl 157 (341)
+-.
T Consensus 187 ~~~ 189 (219)
T 3jwg_A 187 RFL 189 (219)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 109
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.31 E-value=6.8e-07 Score=88.19 Aligned_cols=69 Identities=20% Similarity=0.130 Sum_probs=58.6
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc--CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI--ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n--~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+||+|..++.++. .| .+|+++|+|+.+++.+++|++.+ ++ ++++++++|+.++|... ....||+|++||
T Consensus 101 gcG~G~~al~LA~-~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl-----~~i~~i~~Da~~~L~~~--~~~~fDvV~lDP 171 (410)
T 3ll7_A 101 TGGLGIDFIALMS-KA-SQGIYIERNDETAVAARHNIPLLLNEG-----KDVNILTGDFKEYLPLI--KTFHPDYIYVDP 171 (410)
T ss_dssp SCSSSHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHHSCTT-----CEEEEEESCGGGSHHHH--HHHCCSEEEECC
T ss_pred CCCchHHHHHHHh-cC-CEEEEEECCHHHHHHHHHhHHHhccCC-----CcEEEEECcHHHhhhhc--cCCCceEEEECC
Confidence 5899999998876 34 58999999999999999999988 77 37899999999877543 124799999999
No 110
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.30 E-value=1.1e-06 Score=78.85 Aligned_cols=92 Identities=16% Similarity=0.079 Sum_probs=72.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||||..++.++. .+..+|+++|+|+.+++.+++|++.++. +++++++|+.+++... ....||+|+.|.|..
T Consensus 69 cGtG~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~~~~--~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 69 FGMAIAASKVQE-APIDEHWIIECNDGVFQRLRDWAPRQTH------KVIPLKGLWEDVAPTL--PDGHFDGILYDTYPL 139 (236)
T ss_dssp CTTSHHHHHHHT-SCEEEEEEEECCHHHHHHHHHHGGGCSS------EEEEEESCHHHHGGGS--CTTCEEEEEECCCCC
T ss_pred ccCCHHHHHHHh-cCCCeEEEEcCCHHHHHHHHHHHHhcCC------CeEEEecCHHHhhccc--CCCceEEEEECCccc
Confidence 799999998866 5667899999999999999999886653 6788999999875322 235799999987652
Q ss_pred C--H-------HHHHHHHHhcccCCEEEEE
Q 019408 82 D--S-------SFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p--~-------~fld~al~~v~~gGlL~vt 102 (341)
. . .++..+.+.|++||.|.+.
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 1 1 3367778999999999973
No 111
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.28 E-value=9.3e-07 Score=87.93 Aligned_cols=96 Identities=17% Similarity=0.107 Sum_probs=74.8
Q ss_pred CccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 1 MCGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 1 fagsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
.||+|..++..+... +..+|+++|+|+..++.+++|++.+++. +++++++|+..+... ..+..||+|++||
T Consensus 267 gaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-----~v~~~~~D~~~~~~~--~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 267 AAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-----IVKPLVKDARKAPEI--IGEEVADKVLLDAP 339 (450)
T ss_dssp SCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-----SEEEECSCTTCCSSS--SCSSCEEEEEEECC
T ss_pred CCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-----cEEEEEcChhhcchh--hccCCCCEEEEcCC
Confidence 379999999998753 3368999999999999999999999883 688899998754211 1125799999998
Q ss_pred C-CCC------------------------HHHHHHHHHhcccCCEEEEEec
Q 019408 79 F-GSD------------------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 y-gsp------------------------~~fld~al~~v~~gGlL~vt~T 104 (341)
+ |+. ..+++.+.+.|++||.|.+ +|
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy-~t 389 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLY-TT 389 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEE-EE
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE-Ee
Confidence 2 221 2467888999999999986 44
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.28 E-value=1.2e-06 Score=84.22 Aligned_cols=90 Identities=19% Similarity=0.144 Sum_probs=73.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG- 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg- 80 (341)
||+|..++.++. .|+.+|+++|+|+ +++.+++|++.|++. ++++++++|+.++ ....++||+|+.++.+
T Consensus 75 cG~G~~~~~la~-~g~~~v~gvD~s~-~l~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 75 SGTGILCMFAAK-AGARKVIGIECSS-ISDYAVKIVKANKLD----HVVTIIKGKVEEV----ELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEEECST-HHHHHHHHHHHTTCT----TTEEEEESCTTTC----CCSSSCEEEEEECCCBB
T ss_pred ccchHHHHHHHH-CCCCEEEEECcHH-HHHHHHHHHHHcCCC----CcEEEEECcHHHc----cCCCCceEEEEEccccc
Confidence 799999999998 5888999999994 999999999999884 5689999999765 1234689999998721
Q ss_pred ------CCHHHHHHHHHhcccCCEEEE
Q 019408 81 ------SDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 81 ------sp~~fld~al~~v~~gGlL~v 101 (341)
....++..+.+.|++||++..
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 223456666789999999973
No 113
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.27 E-value=6.9e-07 Score=86.81 Aligned_cols=89 Identities=20% Similarity=0.127 Sum_probs=73.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||||..++.++. .|+.+|+++|+| .+++.+++|++.|++. ++++++++|+.++. . .++||+|+.++.+.
T Consensus 72 cGtG~ls~~la~-~g~~~V~gvD~s-~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~----~-~~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 72 TGSGILAIWSAQ-AGARKVYAVEAT-KMADHARALVKANNLD----HIVEVIEGSVEDIS----L-PEKVDVIISEWMGY 140 (376)
T ss_dssp CTTTHHHHHHHH-TTCSEEEEEESS-TTHHHHHHHHHHTTCT----TTEEEEESCGGGCC----C-SSCEEEEEECCCBT
T ss_pred cCcCHHHHHHHh-cCCCEEEEEccH-HHHHHHHHHHHHcCCC----CeEEEEECchhhcC----c-CCcceEEEEcChhh
Confidence 799999999998 688899999999 9999999999999985 56899999997642 1 26899999998221
Q ss_pred -------CHHHHHHHHHhcccCCEEEE
Q 019408 82 -------DSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 82 -------p~~fld~al~~v~~gGlL~v 101 (341)
+..++....+.|++||+|++
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 22356666689999999985
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.27 E-value=1.6e-06 Score=78.28 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=75.0
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
||+|..++.++...| ..+|+++|+|+.+++.+++|++.+ +. .++++.++|+.+. ......||+|++||-
T Consensus 105 ~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~~~----~~~~~~~D~v~~~~~ 175 (258)
T 2pwy_A 105 TGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-----ENVRFHLGKLEEA----ELEEAAYDGVALDLM 175 (258)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-----CCEEEEESCGGGC----CCCTTCEEEEEEESS
T ss_pred CCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-----CCEEEEECchhhc----CCCCCCcCEEEECCc
Confidence 799999999987524 568999999999999999999988 74 4688899998764 112347999999983
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
. +..+++.+.+.|++||.|++..
T Consensus 176 ~-~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 176 E-PWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp C-GGGGHHHHHHHEEEEEEEEEEE
T ss_pred C-HHHHHHHHHHhCCCCCEEEEEe
Confidence 2 4478899999999999999854
No 115
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.25 E-value=2.6e-06 Score=77.76 Aligned_cols=93 Identities=16% Similarity=0.084 Sum_probs=76.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++.. +..+|+++|+|+.+++.+++|++.+++. +++++.++|+.++- .....||+|+...
T Consensus 55 cG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~----~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 55 CGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQ----NRVTGIVGSMDDLP----FRNEELDLIWSEGAIY 125 (267)
T ss_dssp CTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSCC----CCTTCEEEEEESSCGG
T ss_pred CCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCC----cCcEEEEcChhhCC----CCCCCEEEEEEcCCce
Confidence 7999999999984 6668999999999999999999998874 56899999986532 2346899998765
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
.-.+..++..+.+.|++||.|.++.
T Consensus 126 ~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 126 NIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 1235678888999999999999854
No 116
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.25 E-value=2.2e-06 Score=77.28 Aligned_cols=93 Identities=14% Similarity=0.072 Sum_probs=75.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++.. +..+|+++|+|+.+++.+++|++.+++. +++++.++|+..+ ......||+|+... +
T Consensus 55 ~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 55 CGTGGQTLFLADY-VKGQITGIDLFPDFIEIFNENAVKANCA----DRVKGITGSMDNL----PFQNEELDLIWSEGAIY 125 (257)
T ss_dssp CTTSHHHHHHHHH-CCSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----SSCTTCEEEEEEESCSC
T ss_pred CCCCHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChhhC----CCCCCCEEEEEecChHh
Confidence 7999999999885 4349999999999999999999998884 4688999998543 12346899998764 2
Q ss_pred -CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 -GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
-.+..++..+.+.|++||.|.++.
T Consensus 126 ~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 126 NIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 135578888999999999999865
No 117
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.24 E-value=3.3e-06 Score=76.67 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=73.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH------cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS------IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLID 75 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~------n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvId 75 (341)
||+|...+..|.......|+++|+|+.+++.+++|++. ++. .+++++++|+...|.... ....||.|+
T Consensus 55 cG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-----~nv~~~~~d~~~~l~~~~-~~~~~D~v~ 128 (235)
T 3ckk_A 55 CGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-----QNIACLRSNAMKHLPNFF-YKGQLTKMF 128 (235)
T ss_dssp CTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-----TTEEEEECCTTTCHHHHC-CTTCEEEEE
T ss_pred cCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-----CeEEEEECcHHHhhhhhC-CCcCeeEEE
Confidence 79999999998854346899999999999999999875 233 368899999987554321 235799887
Q ss_pred e---CCCCC---------CHHHHHHHHHhcccCCEEEEEecCC
Q 019408 76 I---DSFGS---------DSSFLRTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 76 l---DPygs---------p~~fld~al~~v~~gGlL~vt~TD~ 106 (341)
+ ||+-. ...++..+.+.|++||.|.+ .||.
T Consensus 129 ~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~-~td~ 170 (235)
T 3ckk_A 129 FLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT-ITDV 170 (235)
T ss_dssp EESCC-----------CCCHHHHHHHHHHEEEEEEEEE-EESC
T ss_pred EeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE-EeCC
Confidence 6 66421 12688889999999999998 5543
No 118
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.24 E-value=1.1e-06 Score=84.14 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=72.6
Q ss_pred ccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++.++.. +. .+|+++|+|+.+++.+++|++.+++. .++...|+.... ...||+|+.+| |
T Consensus 205 cG~G~~~~~la~~-~~~~~v~~vD~s~~~l~~a~~~~~~~~~~------~~~~~~d~~~~~------~~~fD~Iv~~~~~ 271 (343)
T 2pjd_A 205 CGAGVLSVAFARH-SPKIRLTLCDVSAPAVEASRATLAANGVE------GEVFASNVFSEV------KGRFDMIISNPPF 271 (343)
T ss_dssp CTTSHHHHHHHHH-CTTCBCEEEESBHHHHHHHHHHHHHTTCC------CEEEECSTTTTC------CSCEEEEEECCCC
T ss_pred CccCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhCCC------CEEEEccccccc------cCCeeEEEECCCc
Confidence 7999999999884 53 47999999999999999999998872 456788886532 35799999998 5
Q ss_pred CC--------CHHHHHHHHHhcccCCEEEEEec
Q 019408 80 GS--------DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gs--------p~~fld~al~~v~~gGlL~vt~T 104 (341)
.. ...++..+.+.|++||.|.+...
T Consensus 272 ~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 272 HDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 42 23567788899999999998653
No 119
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.23 E-value=1.7e-06 Score=82.40 Aligned_cols=90 Identities=18% Similarity=0.132 Sum_probs=72.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++. .|+.+|+++|+| ..++.+++|++.|++. ++++++++|+.++ ....++||+|+.++.+.
T Consensus 47 cGtG~ls~~la~-~g~~~v~~vD~s-~~~~~a~~~~~~~~~~----~~i~~~~~d~~~~----~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 47 CGTGILSMFAAK-HGAKHVIGVDMS-SIIEMAKELVELNGFS----DKITLLRGKLEDV----HLPFPKVDIIISEWMGY 116 (328)
T ss_dssp CTTSHHHHHHHH-TCCSEEEEEESS-THHHHHHHHHHHTTCT----TTEEEEESCTTTS----CCSSSCEEEEEECCCBT
T ss_pred CccHHHHHHHHH-CCCCEEEEEChH-HHHHHHHHHHHHcCCC----CCEEEEECchhhc----cCCCCcccEEEEeCchh
Confidence 799999999987 688899999999 5899999999999884 5789999998764 12236899999997321
Q ss_pred -------CHHHHHHHHHhcccCCEEEE
Q 019408 82 -------DSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 82 -------p~~fld~al~~v~~gGlL~v 101 (341)
+..++....+.|++||++..
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 23455666689999999974
No 120
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.23 E-value=1.1e-06 Score=82.87 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=73.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC---
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF--- 79 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy--- 79 (341)
|.|...=+.++..++++|+++|||+..+++.++-+...+...-+..+++++.+|++++|+. ..++||+|++|.+
T Consensus 93 GdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~---~~~~yDvIi~D~~dp~ 169 (294)
T 3o4f_A 93 GDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---TSQTFDVIISDCTDPI 169 (294)
T ss_dssp TTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC---SSCCEEEEEESCCCCC
T ss_pred CchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh---ccccCCEEEEeCCCcC
Confidence 5555544555545789999999999999999998753211000125799999999999864 3568999999964
Q ss_pred CCC-----HHHHHHHHHhcccCCEEEEEec
Q 019408 80 GSD-----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gsp-----~~fld~al~~v~~gGlL~vt~T 104 (341)
|.+ .+|.+.+-++|++||++++.+.
T Consensus 170 ~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 170 GPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp CTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 321 3889999999999999998653
No 121
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.23 E-value=3.4e-06 Score=78.57 Aligned_cols=90 Identities=19% Similarity=0.212 Sum_probs=73.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++...| .+|+++|+|+..++.+++|++.+++. +++++.++|+.++ ...||+|+... +
T Consensus 81 cG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~-------~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 81 CGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSP----RRKEVRIQGWEEF-------DEPVDRIVSLGAFE 148 (302)
T ss_dssp CTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCS----SCEEEEECCGGGC-------CCCCSEEEEESCGG
T ss_pred ccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECCHHHc-------CCCccEEEEcchHH
Confidence 799999999988546 67999999999999999999998874 5788999999764 35899987754 2
Q ss_pred --CCC---------HHHHHHHHHhcccCCEEEEEe
Q 019408 80 --GSD---------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 --gsp---------~~fld~al~~v~~gGlL~vt~ 103 (341)
..| ..++..+.+.|++||.|.++.
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 111 477888899999999999854
No 122
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.22 E-value=2e-06 Score=79.21 Aligned_cols=89 Identities=18% Similarity=0.193 Sum_probs=71.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++. .|+ +|+++|+|+.+++.+++|++.+++ ++++.++|+..+.. ...||+|+..+ +.
T Consensus 129 cG~G~~~~~l~~-~g~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~-----~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 129 CGQGRNSLYLSL-LGY-DVTSWDHNENSIAFLNETKEKENL------NISTALYDINAANI-----QENYDFIVSTVVFM 195 (286)
T ss_dssp CTTCHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCGGGCCC-----CSCEEEEEECSSGG
T ss_pred CCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHcCC------ceEEEEeccccccc-----cCCccEEEEccchh
Confidence 799999999988 576 899999999999999999998875 57888999875321 46899999876 21
Q ss_pred --C-C--HHHHHHHHHhcccCCEEEEEe
Q 019408 81 --S-D--SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 --s-p--~~fld~al~~v~~gGlL~vt~ 103 (341)
. + ..++..+.+.|++||.|.+.+
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 2 257788889999999977644
No 123
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.22 E-value=1.6e-06 Score=83.12 Aligned_cols=89 Identities=20% Similarity=0.146 Sum_probs=71.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC--
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF-- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy-- 79 (341)
||+|..++.+++ .|+.+|+++|+|+ +++.+++|++.|++. ++++++++|+.++ ....++||+|+.++.
T Consensus 73 cGtG~ls~~la~-~g~~~v~gvD~s~-~~~~a~~~~~~~~~~----~~i~~~~~d~~~~----~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 73 CGTGILSMFAAK-AGAKKVLGVDQSE-ILYQAMDIIRLNKLE----DTITLIKGKIEEV----HLPVEKVDVIISEWMGY 142 (340)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEEESST-HHHHHHHHHHHTTCT----TTEEEEESCTTTS----CCSCSCEEEEEECCCBT
T ss_pred ccCcHHHHHHHH-cCCCEEEEEChHH-HHHHHHHHHHHcCCC----CcEEEEEeeHHHh----cCCCCcEEEEEEcCchh
Confidence 799999999988 5888999999997 999999999999884 5789999998754 222368999999872
Q ss_pred CC-----CHHHHHHHHHhcccCCEEE
Q 019408 80 GS-----DSSFLRTVFNAVKRDGLLY 100 (341)
Q Consensus 80 gs-----p~~fld~al~~v~~gGlL~ 100 (341)
.- ...++..+.+.|++||.+.
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 21 1235666678999999997
No 124
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.21 E-value=4.3e-06 Score=73.49 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=75.0
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. ++++.++|+..+- .....||+|+..-
T Consensus 46 ~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~----~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 46 TGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-----NVEVLKSEENKIP----LPDNTVDFIFMAFTF 116 (219)
T ss_dssp CTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECBTTBCS----SCSSCEEEEEEESCG
T ss_pred cCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEecccccCC----CCCCCeeEEEeehhh
Confidence 799999999988532 358999999999999999999988873 6888999986531 2345799998764
Q ss_pred --CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 --FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 --ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||.+.++..
T Consensus 117 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 117 HELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp GGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 22345788899999999999998653
No 125
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.21 E-value=1.2e-06 Score=76.83 Aligned_cols=90 Identities=16% Similarity=0.156 Sum_probs=72.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++..+.. ..+|+++|+|+.+++.+++|++.+++. ++++.++|+...+.. ...||+|+++. +.
T Consensus 86 ~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~----~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 86 TGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLH-----NVSTRHGDGWQGWQA----RAPFDAIIVTAAPP 154 (210)
T ss_dssp CTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCCGG----GCCEEEEEESSBCS
T ss_pred CCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCC-----ceEEEECCcccCCcc----CCCccEEEEccchh
Confidence 7999999998884 468999999999999999999998873 688999999864432 35799999986 22
Q ss_pred CCHHHHHHHHHhcccCCEEEEEecC
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTSTD 105 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~TD 105 (341)
.+.+.+.+.|++||.|.++..+
T Consensus 155 ---~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 155 ---EIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ---SCCTHHHHTEEEEEEEEEEECS
T ss_pred ---hhhHHHHHhcccCcEEEEEEcC
Confidence 1123577899999999986543
No 126
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.20 E-value=3.9e-07 Score=84.49 Aligned_cols=89 Identities=9% Similarity=-0.017 Sum_probs=72.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH--cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS--IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~--n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+|+|..+.+.++. + .+|+++|+|+..++.+++|+.. +++. ..+++++.+|+.+++ ++||+|++|..
T Consensus 81 ~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~---~~rv~~~~~D~~~~~-------~~fD~Ii~d~~ 148 (262)
T 2cmg_A 81 GFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKN---NKNFTHAKQLLDLDI-------KKYDLIFCLQE 148 (262)
T ss_dssp SCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHT---CTTEEEESSGGGSCC-------CCEEEEEESSC
T ss_pred CCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccC---CCeEEEEechHHHHH-------hhCCEEEECCC
Confidence 6889998888885 7 8999999999999999998753 1221 146889999998765 47999999974
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
- |..|+..+.+.|++||+|++..
T Consensus 149 d-p~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 149 P-DIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp C-CHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-hHHHHHHHHHhcCCCcEEEEEc
Confidence 3 6678999999999999999843
No 127
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.19 E-value=1.4e-06 Score=82.71 Aligned_cols=98 Identities=17% Similarity=0.149 Sum_probs=72.8
Q ss_pred ccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHH-------cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccE
Q 019408 2 CGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKS-------IERGSGDEKRWVVTHFDANRVLSECYLKREFFDL 73 (341)
Q Consensus 2 agsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~-------n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDv 73 (341)
||+|..++.++...|. .+|+++|+|+.+++.+++|++. |++.. ...++++.++|+.+.+... ....||+
T Consensus 114 ~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~-~~~~v~~~~~d~~~~~~~~--~~~~fD~ 190 (336)
T 2b25_A 114 SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEE-WPDNVDFIHKDISGATEDI--KSLTFDA 190 (336)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSC-CCCCEEEEESCTTCCC---------EEE
T ss_pred CCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccc-cCCceEEEECChHHccccc--CCCCeeE
Confidence 7999999999885355 7899999999999999999985 33310 0136888999997653221 1246999
Q ss_pred EEeCCCCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 74 IDIDSFGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 74 IdlDPygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
|++|+.. |..+++.+.+.|++||.|++..
T Consensus 191 V~~~~~~-~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 191 VALDMLN-PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp EEECSSS-TTTTHHHHGGGEEEEEEEEEEE
T ss_pred EEECCCC-HHHHHHHHHHhcCCCcEEEEEe
Confidence 9999843 3457889999999999999744
No 128
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.18 E-value=2.3e-06 Score=76.14 Aligned_cols=93 Identities=12% Similarity=-0.014 Sum_probs=71.0
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||+|..++..+...| ..+|+++|+|+.+++.+++|++.+ .+++++++|+.+.... ......||+|++|+..
T Consensus 82 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~-~~~~~~~D~v~~~~~~ 153 (227)
T 1g8a_A 82 IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEY-RALVPKVDVIFEDVAQ 153 (227)
T ss_dssp TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGG-TTTCCCEEEEEECCCS
T ss_pred ccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchh-hcccCCceEEEECCCC
Confidence 799999999987534 368999999999999999999865 2577889998763211 1113479999999842
Q ss_pred CC--HHHHHHHHHhcccCCEEEEE
Q 019408 81 SD--SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp--~~fld~al~~v~~gGlL~vt 102 (341)
.. ..++..+.+.|++||.|.+.
T Consensus 154 ~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 154 PTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhHHHHHHHHHHHhcCCCCEEEEE
Confidence 21 13478889999999999986
No 129
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.18 E-value=6.5e-06 Score=80.23 Aligned_cols=101 Identities=15% Similarity=0.065 Sum_probs=71.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc---CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI---ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n---~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
|.|...=+.++ ...++|+++|||+..+++.++-+... .++.+...+++++.+||+++|++....+++||+|++|.|
T Consensus 215 GdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~ 293 (381)
T 3c6k_A 215 GDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLT 293 (381)
T ss_dssp TTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECC
T ss_pred CcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCC
Confidence 45554444454 45689999999999999999865321 111111235889999999999877666778999999953
Q ss_pred ---------CCC-----HHHHHHHHHhcccCCEEEEEec
Q 019408 80 ---------GSD-----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 ---------gsp-----~~fld~al~~v~~gGlL~vt~T 104 (341)
+.+ .+|++.+-++|++||++++.+.
T Consensus 294 D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 294 AVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp SSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 211 2566777889999999987553
No 130
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.17 E-value=3e-06 Score=77.76 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=74.8
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHc-C-CCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSI-E-RGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n-~-~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
||+|..++..+...+ ..+|+++|+|+.+++.+++|++.+ + +. .++++.++|+.+.. .....||+|++|+
T Consensus 108 ~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~----~~v~~~~~d~~~~~----~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 108 AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP----DNWRLVVSDLADSE----LPDGSVDRAVLDM 179 (280)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC----TTEEEECSCGGGCC----CCTTCEEEEEEES
T ss_pred ccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC----CcEEEEECchHhcC----CCCCceeEEEECC
Confidence 799999999887423 568999999999999999999987 5 32 46888999987641 1235799999997
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
- .+..+++.+.+.|++||.|++..
T Consensus 180 ~-~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 180 L-APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp S-CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred c-CHHHHHHHHHHhCCCCCEEEEEe
Confidence 3 24578899999999999999854
No 131
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.17 E-value=6.4e-06 Score=73.70 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=70.7
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCC--CCCCCccEEEEeccHHHH------------------HH
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIER--GSGDEKRWVVTHFDANRV------------------LS 62 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~--~~~~~~~~~v~~~DA~~~------------------l~ 62 (341)
|||.=++-+|. ....+|+.+|.|++-.+.+++|++.+++ . ++++++.+||... ..
T Consensus 38 GtGySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~----~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~ 112 (202)
T 3cvo_A 38 GSGGSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEG----TEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPL 112 (202)
T ss_dssp SCSHHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTT----CEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHH
T ss_pred CchHHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC----CceEEEEeCchhhhcccccccchhhhhHHHHhh
Confidence 78876777775 3247899999999999999999999886 4 6889999997542 21
Q ss_pred Hhhh--cCCcccEEEeCC-CCCCHHHHHHHHHhcccCCEEEE
Q 019408 63 ECYL--KREFFDLIDIDS-FGSDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 63 ~~~~--~~~~fDvIdlDP-ygsp~~fld~al~~v~~gGlL~v 101 (341)
.... ....||+|++|= +. ..++..+++.+++||+|.+
T Consensus 113 ~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 113 AVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEE
T ss_pred hhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEE
Confidence 1111 125799999997 33 3778889999999999965
No 132
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.17 E-value=3.6e-06 Score=73.42 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=75.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++.. ...+|+++|+|+.+++.+++|++.+++. .++++.++|+.++- .....||+|+...
T Consensus 52 ~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~----~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 52 SGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLN----DRIQIVQGDVHNIP----IEDNYADLIVSRGSVF 122 (219)
T ss_dssp CTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECBTTBCS----SCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcccc----CceEEEEcCHHHCC----CCcccccEEEECchHh
Confidence 7999999999885 3457999999999999999999988874 46889999986531 2345899999876
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|.++.
T Consensus 123 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 2344678889999999999999854
No 133
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.14 E-value=5.2e-06 Score=74.35 Aligned_cols=92 Identities=12% Similarity=0.049 Sum_probs=71.7
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||+|..++..+...| ..+|+++|+|+.+++.+.+|++.+ .+++++++|+..... .......||+|+.|+..
T Consensus 86 ~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~-~~~~~~~~D~V~~~~~~ 157 (233)
T 2ipx_A 86 AASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHK-YRMLIAMVDVIFADVAQ 157 (233)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGG-GGGGCCCEEEEEECCCC
T ss_pred ccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhh-hcccCCcEEEEEEcCCC
Confidence 799999999988533 468999999999999999999876 256788999876321 11124579999999853
Q ss_pred CC---HHHHHHHHHhcccCCEEEEE
Q 019408 81 SD---SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp---~~fld~al~~v~~gGlL~vt 102 (341)
+ ..++..+.+.|++||.|+++
T Consensus 158 -~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 158 -PDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp -TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -ccHHHHHHHHHHHHcCCCeEEEEE
Confidence 3 33477788999999999984
No 134
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.14 E-value=2.2e-06 Score=76.18 Aligned_cols=101 Identities=15% Similarity=0.182 Sum_probs=72.5
Q ss_pred ccccHhHHHHhhhCC-----CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEe
Q 019408 2 CGCGIRSLRYLAEAK-----ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDI 76 (341)
Q Consensus 2 agsG~rgir~a~e~g-----a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdl 76 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++..-+..++++.++|+...+.........||+|++
T Consensus 89 ~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~ 168 (227)
T 2pbf_A 89 SGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHV 168 (227)
T ss_dssp CTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEE
T ss_pred CCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEE
Confidence 799999998887433 248999999999999999999987620000036788999988643110011347999999
Q ss_pred CCCCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 77 DSFGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 77 DPygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
++-.. .+++.+.+.|++||.|+++..
T Consensus 169 ~~~~~--~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 169 GASAS--ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CSBBS--SCCHHHHHHEEEEEEEEEEEE
T ss_pred CCchH--HHHHHHHHhcCCCcEEEEEEc
Confidence 98221 345778889999999998653
No 135
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.13 E-value=4e-06 Score=77.19 Aligned_cols=93 Identities=18% Similarity=0.151 Sum_probs=75.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|+ +|+++|+|+.+++.++++++.+++. .+++++++|+.++.. .....||+|+..-
T Consensus 77 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~---~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 77 GGEGQTAIKMAE-RGH-QVILCDLSAQMIDRAKQAAEAKGVS----DNMQFIHCAAQDVAS---HLETPVDLILFHAVLE 147 (285)
T ss_dssp CTTCHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHC-CCG----GGEEEEESCGGGTGG---GCSSCEEEEEEESCGG
T ss_pred CcchHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHhcCCC----cceEEEEcCHHHhhh---hcCCCceEEEECchhh
Confidence 799999999988 465 7999999999999999999988773 478899999987642 1246899998764
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|.++.
T Consensus 148 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 148 WVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 2345678889999999999999854
No 136
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.10 E-value=2.9e-06 Score=81.43 Aligned_cols=90 Identities=23% Similarity=0.180 Sum_probs=72.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++. .|+.+|+++|+|+ .++.+++|++.|++. ++++++++|+.++- ..++||+|+.++.+.
T Consensus 59 cGtG~ls~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~l~----~~v~~~~~d~~~~~-----~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 59 CGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNLT----DRIVVIPGKVEEVS-----LPEQVDIIISEPMGY 127 (348)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEEECST-HHHHHHHHHHHTTCT----TTEEEEESCTTTCC-----CSSCEEEEEECCCBT
T ss_pred CCccHHHHHHHh-CCCCEEEEECCHH-HHHHHHHHHHHcCCC----CcEEEEEcchhhCC-----CCCceeEEEEeCchh
Confidence 799999999988 6888999999997 679999999999884 57899999987541 135799999997321
Q ss_pred ----C--HHHHHHHHHhcccCCEEEEE
Q 019408 82 ----D--SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 ----p--~~fld~al~~v~~gGlL~vt 102 (341)
. ...+..+.+.|++||++.++
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 1 24556677899999999864
No 137
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.08 E-value=1.8e-06 Score=86.84 Aligned_cols=91 Identities=23% Similarity=0.170 Sum_probs=71.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++. .|+.+|+++|+|+ +++.+++|++.|++. ++++++++|+.++ . -.++||+|+.+|.+.
T Consensus 167 cGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl~----~~v~~~~~d~~~~----~-~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 167 CGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNLT----DRIVVIPGKVEEV----S-LPEQVDIIISEPMGY 235 (480)
T ss_dssp CSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTCT----TTEEEEESCTTTC----C-CSSCEEEEECCCCHH
T ss_pred CcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCCC----CcEEEEECchhhC----c-cCCCeEEEEEeCchH
Confidence 799999998887 6888999999999 889999999999884 5789999998753 1 135799999998321
Q ss_pred ---C---HHHHHHHHHhcccCCEEEEEe
Q 019408 82 ---D---SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 ---p---~~fld~al~~v~~gGlL~vt~ 103 (341)
. ...+..+.+.|++||+|.++.
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 133445568899999998643
No 138
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.07 E-value=7.8e-06 Score=74.66 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=76.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++......+|+++|+|+..++.+++|+..+++. ++++...|+..+. .....||+|+...
T Consensus 46 ~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 46 CGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-----NVKFLQANIFSLP----FEDSSFDHIFVCFVLE 116 (276)
T ss_dssp CTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCGGGCC----SCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEcccccCC----CCCCCeeEEEEechhh
Confidence 799999999888532468999999999999999999988873 6888999987542 2346899998764
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEecCC
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~TD~ 106 (341)
...+..++..+.+.|++||+|.++..|.
T Consensus 117 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 117 HLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred hcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 2234578888999999999999976544
No 139
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.07 E-value=1.2e-05 Score=76.03 Aligned_cols=90 Identities=9% Similarity=-0.014 Sum_probs=69.4
Q ss_pred ccccHhH-HHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRS-LRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rg-ir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||+|..+ +.+++..| .+|+++|+|+++++.+++|++..++ +++++.++|+.++- ...||+|+++=..
T Consensus 131 cG~G~~ta~~lA~~~g-a~V~gIDis~~~l~~Ar~~~~~~gl-----~~v~~v~gDa~~l~------d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 131 GGPLPLTGILLSHVYG-MRVNVVEIEPDIAELSRKVIEGLGV-----DGVNVITGDETVID------GLEFDVLMVAALA 198 (298)
T ss_dssp CCSSCHHHHHHHHTTC-CEEEEEESSHHHHHHHHHHHHHHTC-----CSEEEEESCGGGGG------GCCCSEEEECTTC
T ss_pred CCccHHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEECchhhCC------CCCcCEEEECCCc
Confidence 4555554 44454345 4799999999999999999998877 37899999998641 3579999997532
Q ss_pred -CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 -SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 -sp~~fld~al~~v~~gGlL~vt~ 103 (341)
.+..+++...+.|++||.|.+..
T Consensus 199 ~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 199 EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 22468889999999999999854
No 140
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.07 E-value=9.6e-06 Score=74.57 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=72.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++.+.|+ +|+++|+|+..++.++++++..++. .++++.++|+.++ ...||+|+..-
T Consensus 73 cG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~-------~~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 73 CGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENL----RSKRVLLAGWEQF-------DEPVDRIVSIGAFE 140 (287)
T ss_dssp CTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCC----SCEEEEESCGGGC-------CCCCSEEEEESCGG
T ss_pred CcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCC----CCeEEEECChhhC-------CCCeeEEEEeCchh
Confidence 7999999999865666 8999999999999999999977763 4688899998542 15799887652
Q ss_pred -C--CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -F--GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -y--gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+ ..+..++..+.+.|++||.|.++.
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 224578889999999999999854
No 141
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.06 E-value=9.9e-06 Score=71.34 Aligned_cols=91 Identities=20% Similarity=0.110 Sum_probs=70.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++..+. .+. +|+++|+|+.+++.+++|++.++. ++++.++|+..+ ......||+|+..+
T Consensus 47 ~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~----~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 47 CGVGGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRES------NVEFIVGDARKL----SFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTC------CCEEEECCTTSC----CSCTTCEEEEEEESCGG
T ss_pred ccCCHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHhcCC------CceEEECchhcC----CCCCCcEEEEEEcCchH
Confidence 799999988877 565 899999999999999999987752 567889998652 12235799888766
Q ss_pred CCC---CHHHHHHHHHhcccCCEEEEEec
Q 019408 79 FGS---DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 ygs---p~~fld~al~~v~~gGlL~vt~T 104 (341)
+.. +..++..+.+.|++||.|.++..
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 332 23567788899999999998653
No 142
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.05 E-value=6.6e-06 Score=73.02 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=70.9
Q ss_pred ccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||+|..++.++...|. .+|+++|+|+..++.+++|++.+++......++++.+.|+.... .....||+|+++..-
T Consensus 86 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 86 SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----AEEAPYDAIHVGAAA 161 (226)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----GGGCCEEEEEECSBB
T ss_pred CCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc----ccCCCcCEEEECCch
Confidence 7999999988874344 48999999999999999999986530000035788899986432 123579999999722
Q ss_pred CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~ 103 (341)
. .+++.+.+.|++||.|.++.
T Consensus 162 ~--~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 162 P--VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp S--SCCHHHHHTEEEEEEEEEEE
T ss_pred H--HHHHHHHHhcCCCcEEEEEE
Confidence 1 44577889999999999854
No 143
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.04 E-value=6e-06 Score=86.66 Aligned_cols=82 Identities=12% Similarity=0.102 Sum_probs=59.3
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CCCC----HH---H---HH
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FGSD----SS---F---LR 87 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygsp----~~---f---ld 87 (341)
+|+.+|+|+.+++.+++|++.+++. +.+++.++|+.++... .....||+|+.+| ||.- .. + +.
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~----~~i~~~~~D~~~~~~~--~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~ 331 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIG----ELITFEVKDVAQLTNP--LPKGPYGTVLSNPPYGERLDSEPALIALHSLLG 331 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEECCGGGCCCS--CTTCCCCEEEECCCCCC---CCHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChhhCccc--cccCCCCEEEeCCCccccccchhHHHHHHHHHH
Confidence 6999999999999999999999984 5689999999864211 1112799999999 8842 11 1 22
Q ss_pred HHHHhcccCCEEEEEecCC
Q 019408 88 TVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 88 ~al~~v~~gGlL~vt~TD~ 106 (341)
..++.+.+||-+++-+.|.
T Consensus 332 ~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 332 RIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHCTTCEEEEEESCH
T ss_pred HHHHhhCCCCeEEEEeCCH
Confidence 4455566799888755443
No 144
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.04 E-value=6.4e-06 Score=73.93 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=69.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|..++.++...+ .+|+++|+|+.+++.+++|++.+++. ++++..+|+..-+ .....||+|+++.--.
T Consensus 100 ~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~----~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 100 TGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVK-----NVHVILGDGSKGF----PPKAPYDVIIVTAGAP 169 (235)
T ss_dssp CTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCC----GGGCCEEEEEECSBBS
T ss_pred CCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCC-----CcEEEECCcccCC----CCCCCccEEEECCcHH
Confidence 799999999987544 67999999999999999999988874 4788899983211 1223599999987111
Q ss_pred CHHHHHHHHHhcccCCEEEEEec
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~T 104 (341)
.+.+.+.+.|++||.|+++..
T Consensus 170 --~~~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 170 --KIPEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp --SCCHHHHHTEEEEEEEEEEEC
T ss_pred --HHHHHHHHhcCCCcEEEEEEe
Confidence 223567889999999998553
No 145
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.04 E-value=7.1e-06 Score=70.64 Aligned_cols=91 Identities=18% Similarity=0.117 Sum_probs=71.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++|++.+++. .+++.+.|+..+. . ...||+|+... +.
T Consensus 41 ~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~----~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 41 CGNGRNSLYLAA-NGY-DVDAWDKNAMSIANVERIKSIENLD-----NLHTRVVDLNNLT----F-DRQYDFILSTVVLM 108 (199)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECCGGGCC----C-CCCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHhCCCC-----CcEEEEcchhhCC----C-CCCceEEEEcchhh
Confidence 799999998887 465 7999999999999999999988773 5788899987532 1 45799998765 21
Q ss_pred -----CCHHHHHHHHHhcccCCEEEEEec
Q 019408 81 -----SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 -----sp~~fld~al~~v~~gGlL~vt~T 104 (341)
.+..++..+.+.|++||.|.+..+
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 234677888899999999876443
No 146
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.04 E-value=1.6e-05 Score=70.71 Aligned_cols=94 Identities=13% Similarity=0.131 Sum_probs=67.9
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||+|..++..+.+. ++ +|+++|+|+.+++++++|+..+++. .++++ .|..... .+..||+|.+==
T Consensus 58 CG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~----~~v~~--~d~~~~~-----~~~~~DvVLa~k-- 123 (200)
T 3fzg_A 58 CGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTT----IKYRF--LNKESDV-----YKGTYDVVFLLK-- 123 (200)
T ss_dssp CTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCS----SEEEE--ECCHHHH-----TTSEEEEEEEET--
T ss_pred CCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCC----ccEEE--ecccccC-----CCCCcChhhHhh--
Confidence 79999999999874 56 9999999999999999999999884 35554 5554321 245799886532
Q ss_pred CCHHHH-------HHHHHhcccCCEEEEEecCCCCCCCC
Q 019408 81 SDSSFL-------RTVFNAVKRDGLLYLTSTDGYSSGGH 112 (341)
Q Consensus 81 sp~~fl-------d~al~~v~~gGlL~vt~TD~~~l~g~ 112 (341)
-.+.+ ...++.|++||+++- -|+..+.|.
T Consensus 124 -~LHlL~~~~~al~~v~~~L~pggvfIS--fptksl~Gr 159 (200)
T 3fzg_A 124 -MLPVLKQQDVNILDFLQLFHTQNFVIS--FPIKSLSGK 159 (200)
T ss_dssp -CHHHHHHTTCCHHHHHHTCEEEEEEEE--EECCCCC--
T ss_pred -HHHhhhhhHHHHHHHHHHhCCCCEEEE--eChHHhcCC
Confidence 12222 267889999998873 345566664
No 147
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.03 E-value=5.6e-06 Score=74.56 Aligned_cols=92 Identities=13% Similarity=0.068 Sum_probs=74.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++...| .+|+++|+|+..++.+++|++.+++. .++++.++|+.++. . ...||+|+.-.
T Consensus 45 cG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~----~~v~~~~~d~~~~~----~-~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 45 SGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEELGVS----ERVHFIHNDAAGYV----A-NEKCDVAACVGATW 114 (256)
T ss_dssp CTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCCTTCC----C-SSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEECChHhCC----c-CCCCCEEEECCChH
Confidence 799999999887544 47999999999999999999988874 46888999987642 1 45799998632
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|+++.
T Consensus 115 ~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 115 IAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp GTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 2345688889999999999999854
No 148
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.01 E-value=1.1e-05 Score=71.17 Aligned_cols=96 Identities=20% Similarity=0.239 Sum_probs=73.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .|+ +|+++|+|+.+++.+++|++.+++......++++.+.|+..+ ......||+|++.. +
T Consensus 39 ~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v~~~~~l~ 112 (235)
T 3sm3_A 39 CGSGKISLELAS-KGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL----SFHDSSFDFAVMQAFLT 112 (235)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC----CSCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHh-CCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc----CCCCCceeEEEEcchhh
Confidence 799999999988 465 799999999999999999987765311123578889998653 12346899998865 1
Q ss_pred --CCCH---HHHHHHHHhcccCCEEEEEe
Q 019408 80 --GSDS---SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 --gsp~---~fld~al~~v~~gGlL~vt~ 103 (341)
..+. .++..+.+.|++||.|+++.
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 113 SVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp GCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 1233 57888889999999999854
No 149
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.99 E-value=1.4e-05 Score=78.92 Aligned_cols=96 Identities=13% Similarity=0.057 Sum_probs=71.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHH-------HcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLK-------SIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLI 74 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~-------~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvI 74 (341)
||+|...+.+|.+.|+.+|+.+|+|+.+++++++|++ .+++. ..+++++++|+.++-.... -..||+|
T Consensus 182 CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~---~~rVefi~GD~~~lp~~d~--~~~aDVV 256 (438)
T 3uwp_A 182 SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK---HAEYTLERGDFLSEEWRER--IANTSVI 256 (438)
T ss_dssp CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC---CCEEEEEECCTTSHHHHHH--HHTCSEE
T ss_pred CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC---CCCeEEEECcccCCccccc--cCCccEE
Confidence 7999999999987788899999999999999999864 34541 1478999999987543211 1269999
Q ss_pred EeCCC-CCC--HHHHHHHHHhcccCCEEEEE
Q 019408 75 DIDSF-GSD--SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 75 dlDPy-gsp--~~fld~al~~v~~gGlL~vt 102 (341)
++.++ -.+ ...+...++.|++||.|+++
T Consensus 257 f~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 257 FVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred EEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 99873 222 12344567889999999864
No 150
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.99 E-value=1.4e-05 Score=69.53 Aligned_cols=80 Identities=21% Similarity=0.202 Sum_probs=62.3
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
.||+|..++.++. .|+.+|+++|+|+.+++.+++|++ + ++++++|+.++ ...||+|++|| |
T Consensus 59 gcG~G~~~~~l~~-~~~~~v~~vD~~~~~~~~a~~~~~--~--------~~~~~~d~~~~-------~~~~D~v~~~~p~ 120 (200)
T 1ne2_A 59 GTGNGILACGSYL-LGAESVTAFDIDPDAIETAKRNCG--G--------VNFMVADVSEI-------SGKYDTWIMNPPF 120 (200)
T ss_dssp TCTTCHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCT--T--------SEEEECCGGGC-------CCCEEEEEECCCC
T ss_pred eCCccHHHHHHHH-cCCCEEEEEECCHHHHHHHHHhcC--C--------CEEEECcHHHC-------CCCeeEEEECCCc
Confidence 3899999999987 588899999999999999999986 2 35788998763 25799999999 5
Q ss_pred CC-----CHHHHHHHHHhcccCCEEEE
Q 019408 80 GS-----DSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 80 gs-----p~~fld~al~~v~~gGlL~v 101 (341)
.. ...++..+++.+ |.+++
T Consensus 121 ~~~~~~~~~~~l~~~~~~~---g~~~~ 144 (200)
T 1ne2_A 121 GSVVKHSDRAFIDKAFETS---MWIYS 144 (200)
T ss_dssp -------CHHHHHHHHHHE---EEEEE
T ss_pred hhccCchhHHHHHHHHHhc---CcEEE
Confidence 43 235788888887 44544
No 151
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.98 E-value=1.3e-05 Score=73.74 Aligned_cols=99 Identities=19% Similarity=0.271 Sum_probs=72.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC--CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID--SF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD--Py 79 (341)
||+|..++.++. .|+ +|+++|+|+.+++.+++|+...+... ...++.+..+|+..+.... .....||+|+.- .+
T Consensus 66 cG~G~~~~~l~~-~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~-~~~~~fD~V~~~g~~l 141 (293)
T 3thr_A 66 CGTGVDSIMLVE-EGF-SVTSVDASDKMLKYALKERWNRRKEP-AFDKWVIEEANWLTLDKDV-PAGDGFDAVICLGNSF 141 (293)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTTSH-HHHTCEEEECCGGGHHHHS-CCTTCEEEEEECTTCG
T ss_pred CCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHhhhhccccc-ccceeeEeecChhhCcccc-ccCCCeEEEEEcChHH
Confidence 799999999988 476 89999999999999999986433210 0024567888987765332 234689999985 22
Q ss_pred ---CC-------CHHHHHHHHHhcccCCEEEEEec
Q 019408 80 ---GS-------DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 ---gs-------p~~fld~al~~v~~gGlL~vt~T 104 (341)
.. +..++..+.+.|++||+|.++..
T Consensus 142 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 142 AHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 12 34678888999999999998653
No 152
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.96 E-value=1.7e-05 Score=71.17 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=73.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .+ .+|+++|+|+.+++.+++|++.+++. ++++.++|+..+ ......||+|+..-
T Consensus 30 cG~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 98 (239)
T 1xxl_A 30 AGAGHTALAFSP-YV-QECIGVDATKEMVEVASSFAQEKGVE-----NVRFQQGTAESL----PFPDDSFDIITCRYAAH 98 (239)
T ss_dssp CTTSHHHHHHGG-GS-SEEEEEESCHHHHHHHHHHHHHHTCC-----SEEEEECBTTBC----CSCTTCEEEEEEESCGG
T ss_pred cCcCHHHHHHHH-hC-CEEEEEECCHHHHHHHHHHHHHcCCC-----CeEEEecccccC----CCCCCcEEEEEECCchh
Confidence 799999998887 45 48999999999999999999988773 578889998642 12345799998773
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||.|.++..
T Consensus 99 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 99 HFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 33456788889999999999998543
No 153
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.96 E-value=2.8e-05 Score=67.49 Aligned_cols=91 Identities=11% Similarity=-0.011 Sum_probs=70.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF-G 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy-g 80 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++|++.++. ++++.+.|+..+ ......||+|+.... -
T Consensus 38 cG~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~----~~~~~~fD~v~~~~~~~ 105 (202)
T 2kw5_A 38 EGEGRNACFLAS-LGY-EVTAVDQSSVGLAKAKQLAQEKGV------KITTVQSNLADF----DIVADAWEGIVSIFCHL 105 (202)
T ss_dssp CSCTHHHHHHHT-TTC-EEEEECSSHHHHHHHHHHHHHHTC------CEEEECCBTTTB----SCCTTTCSEEEEECCCC
T ss_pred CCCCHhHHHHHh-CCC-eEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcChhhc----CCCcCCccEEEEEhhcC
Confidence 799999988887 565 899999999999999999998765 467888998754 122457999987531 1
Q ss_pred ---CCHHHHHHHHHhcccCCEEEEEec
Q 019408 81 ---SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 ---sp~~fld~al~~v~~gGlL~vt~T 104 (341)
.+..++..+.+.|++||.|+++..
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 123567788889999999998653
No 154
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.95 E-value=2e-05 Score=73.74 Aligned_cols=91 Identities=22% Similarity=0.243 Sum_probs=72.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++...|+ +|+++|+|+..++.++++++.+++. .++++.++|+.++ ...||+|+...
T Consensus 99 cG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~-------~~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 99 CGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTN----RSRQVLLQGWEDF-------AEPVDRIVSIEAFE 166 (318)
T ss_dssp CTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCGGGC-------CCCCSEEEEESCGG
T ss_pred ccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECChHHC-------CCCcCEEEEeChHH
Confidence 7899999998874465 8999999999999999999987763 4688899998543 25799987653
Q ss_pred -CC--CCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FG--SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -yg--sp~~fld~al~~v~~gGlL~vt~T 104 (341)
++ .+..++..+.+.|++||.|.++.-
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 21 235678888999999999998543
No 155
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.95 E-value=8e-05 Score=72.13 Aligned_cols=99 Identities=20% Similarity=0.161 Sum_probs=73.9
Q ss_pred CccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCC-CCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGS-GDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~-~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.||.|.-++-.|. .+. ..|++||+|+.-++.+++|++..+... .....+++.+.|+..+-.. .+..||.|.+|+
T Consensus 156 CAaPGGKT~~la~-~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~---~~~~fD~VLlDa 231 (359)
T 4fzv_A 156 CAAPGGKTLALLQ-TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL---EGDTYDRVLVDV 231 (359)
T ss_dssp SCTTCHHHHHHHH-TTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH---STTCEEEEEEEC
T ss_pred cCCccHHHHHHHH-hcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh---ccccCCEEEECC
Confidence 4788999988776 443 579999999999999999999876520 0124678899999876432 246899999998
Q ss_pred CCCCH----------------------------HHHHHHHHhcccCCEEEEEec
Q 019408 79 FGSDS----------------------------SFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 ygsp~----------------------------~fld~al~~v~~gGlL~vt~T 104 (341)
--|.. ..|+.|+++|++||.|.- +|
T Consensus 232 PCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVY-sT 284 (359)
T 4fzv_A 232 PCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVY-ST 284 (359)
T ss_dssp CCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEE-EE
T ss_pred ccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEE-Ee
Confidence 52211 234688999999998874 66
No 156
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.94 E-value=1.1e-05 Score=74.47 Aligned_cols=93 Identities=14% Similarity=0.186 Sum_probs=74.2
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|+..++. ++++.++|+.++. . ...||+|+...
T Consensus 31 cG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~----~-~~~fD~v~~~~~l 99 (284)
T 3gu3_A 31 CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY------DSEFLEGDATEIE----L-NDKYDIAICHAFL 99 (284)
T ss_dssp CTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS------EEEEEESCTTTCC----C-SSCEEEEEEESCG
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcchhhcC----c-CCCeeEEEECChh
Confidence 799999999988532 46899999999999999999986653 6788999998632 1 35899998876
Q ss_pred --CCCCHHHHHHHHHhcccCCEEEEEecC
Q 019408 79 --FGSDSSFLRTVFNAVKRDGLLYLTSTD 105 (341)
Q Consensus 79 --ygsp~~fld~al~~v~~gGlL~vt~TD 105 (341)
+..+..++..+.+.|++||+|.+...+
T Consensus 100 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 223457888899999999999986643
No 157
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.94 E-value=8.4e-06 Score=74.82 Aligned_cols=94 Identities=17% Similarity=0.142 Sum_probs=72.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .|..+|+++|+|+.+++.+++|+..++.. .++++.++|+...- ......||+|+..- +
T Consensus 73 cG~G~~~~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~~~~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 73 CGKGGDLLKYER-AGIGEYYGVDIAEVSINDARVRARNMKRR----FKVFFRAQDSYGRH---MDLGKEFDVISSQFSFH 144 (298)
T ss_dssp CTTTTTHHHHHH-HTCSEEEEEESCHHHHHHHHHHHHTSCCS----SEEEEEESCTTTSC---CCCSSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHhcCCC----ccEEEEECCccccc---cCCCCCcCEEEECchhh
Confidence 799999999776 57779999999999999999999977663 46788999987641 11245799998764 2
Q ss_pred ---CC---CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 ---GS---DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 ---gs---p~~fld~al~~v~~gGlL~vt~ 103 (341)
.. +..++..+.+.|++||.|+++.
T Consensus 145 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 145 YAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 11 2356777888999999999854
No 158
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.94 E-value=9.9e-06 Score=76.46 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=71.3
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++.++...+ ..+|+++|+|++.++.+++|++.+++. ++++.++|+.+.+. ....||+|+.++ +
T Consensus 84 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-----~v~~~~~d~~~~~~----~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 84 GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-----NVIFVCGDGYYGVP----EFSPYDVIFVTVGV 154 (317)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCCG----GGCCEEEEEECSBB
T ss_pred CCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEEEECChhhccc----cCCCeEEEEEcCCH
Confidence 799999999987533 257999999999999999999998874 48889999976432 134799999998 3
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
... .+.+.+.|++||.|++..
T Consensus 155 ~~~---~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 155 DEV---PETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp SCC---CHHHHHHEEEEEEEEEEB
T ss_pred HHH---HHHHHHhcCCCcEEEEEE
Confidence 211 156678999999999864
No 159
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.94 E-value=1.1e-05 Score=75.29 Aligned_cols=93 Identities=17% Similarity=0.123 Sum_probs=73.2
Q ss_pred ccccHhHHHHhh-hCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLA-EAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~-e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++..+. .....+|+++|+|+.+++.+++|++.+++. ++++++++|+.++. . ...||+|+..+ +
T Consensus 127 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~----~-~~~fD~v~~~~~~ 197 (305)
T 3ocj_A 127 CGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA----GQITLHRQDAWKLD----T-REGYDLLTSNGLN 197 (305)
T ss_dssp CTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEECCGGGCC----C-CSCEEEEECCSSG
T ss_pred CCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECchhcCC----c-cCCeEEEEECChh
Confidence 789999998853 233468999999999999999999988774 56899999998642 1 26899999966 2
Q ss_pred ---CCCHH---HHHHHHHhcccCCEEEEEe
Q 019408 80 ---GSDSS---FLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 ---gsp~~---fld~al~~v~~gGlL~vt~ 103 (341)
..+.. ++..+.+.|++||.|+++.
T Consensus 198 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 198 IYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp GGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 23332 6888899999999999854
No 160
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.93 E-value=1e-05 Score=75.77 Aligned_cols=93 Identities=8% Similarity=-0.062 Sum_probs=74.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++...| .+|+++|+|+.+++.+++|++.+++. .++++.++|+.++ ......||+|+.--
T Consensus 126 cG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 126 CGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELRID----DHVRSRVCNMLDT----PFDKGAVTASWNNESTM 196 (312)
T ss_dssp CTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CCCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChhcC----CCCCCCEeEEEECCchh
Confidence 799999999887434 57999999999999999999999874 4788999998653 12346899996642
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+-.+..++..+.+.|++||.|.++.
T Consensus 197 ~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 197 YVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp GSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 1125678889999999999999754
No 161
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.92 E-value=5.6e-06 Score=74.32 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=70.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .+..+|+++|+|+.+++.+++|+..++. .++++.+.|+..+. .....||+|+++-
T Consensus 88 cG~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 88 AGIGRITKRLLL-PLFREVDMVDITEDFLVQAKTYLGEEGK-----RVRNYFCCGLQDFT----PEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CTTTHHHHHTTT-TTCSEEEEEESCHHHHHHHHHHTGGGGG-----GEEEEEECCGGGCC----CCSSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-hcCCEEEEEeCCHHHHHHHHHHhhhcCC-----ceEEEEEcChhhcC----CCCCCEEEEEEcchhh
Confidence 799999998887 4667899999999999999999987642 35778899976532 2245799998874
Q ss_pred CC-CCH--HHHHHHHHhcccCCEEEEEe
Q 019408 79 FG-SDS--SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 yg-sp~--~fld~al~~v~~gGlL~vt~ 103 (341)
+- .+. .++..+.+.|++||.|+++.
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 11 111 56778889999999999854
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.92 E-value=1e-05 Score=71.14 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=70.7
Q ss_pred ccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||+|..++.++...|. .+|+++|+|+..++.+++|++.+++. .+++.+.|+...+. ....||+|+++. +
T Consensus 86 ~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~----~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 86 TGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-----NVIVIVGDGTLGYE----PLAPYDRIYTTAAG 156 (215)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEESCGGGCCG----GGCCEEEEEESSBB
T ss_pred CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEECCcccCCC----CCCCeeEEEECCch
Confidence 7899999999885333 68999999999999999999988873 57888999853221 135799999987 2
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEec
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt~T 104 (341)
.. +.+.+.+.|++||.|+++..
T Consensus 157 ~~---~~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 157 PK---IPEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp SS---CCHHHHHTEEEEEEEEEEES
T ss_pred HH---HHHHHHHHcCCCcEEEEEEC
Confidence 21 22577889999999998653
No 163
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.91 E-value=2.1e-05 Score=71.58 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=73.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++...| .+|+++|+|+..++.++++++.+++. +++++..+|+.++ ......||+|+.-.
T Consensus 70 cG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 140 (273)
T 3bus_A 70 CGIGKPAVRLATARD-VRVTGISISRPQVNQANARATAAGLA----NRVTFSYADAMDL----PFEDASFDAVWALESLH 140 (273)
T ss_dssp CTTSHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CSCTTCEEEEEEESCTT
T ss_pred CCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEECccccC----CCCCCCccEEEEechhh
Confidence 799999999887544 58999999999999999999988874 4688899998753 12245799887543
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|.++.
T Consensus 141 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 141 HMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 2335577888899999999999854
No 164
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.90 E-value=8.5e-06 Score=70.91 Aligned_cols=90 Identities=12% Similarity=0.112 Sum_probs=69.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++. .|..+|+++|+|+.+++.+++|+.. . ..+++.++|+.++ ......||+|+..+ +.
T Consensus 51 cG~G~~~~~l~~-~~~~~v~~~D~s~~~~~~a~~~~~~--~-----~~i~~~~~d~~~~----~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 51 CGNSALSYELFL-GGFPNVTSVDYSSVVVAAMQACYAH--V-----PQLRWETMDVRKL----DFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CTTCSHHHHHHH-TTCCCEEEEESCHHHHHHHHHHTTT--C-----TTCEEEECCTTSC----CSCSSCEEEEEEESHHH
T ss_pred CCCcHHHHHHHH-cCCCcEEEEeCCHHHHHHHHHhccc--C-----CCcEEEEcchhcC----CCCCCcccEEEECcchh
Confidence 799999999887 5766899999999999999999863 1 2567788898653 12345799998765 21
Q ss_pred ------------------CCHHHHHHHHHhcccCCEEEEEe
Q 019408 81 ------------------SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 ------------------sp~~fld~al~~v~~gGlL~vt~ 103 (341)
.+..++..+.+.|++||.+.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 11466778889999999999854
No 165
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.90 E-value=2.3e-05 Score=72.44 Aligned_cols=94 Identities=9% Similarity=-0.008 Sum_probs=74.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++...|+ +|+++|+|+.+++.++++++..++. .++++.++|+.++ ......||+|+.--
T Consensus 91 cG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 161 (297)
T 2o57_A 91 AGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLA----DNITVKYGSFLEI----PCEDNSYDFIWSQDAFL 161 (297)
T ss_dssp CTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCT----TTEEEEECCTTSC----SSCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEEcCcccC----CCCCCCEeEEEecchhh
Confidence 7899999998874354 7999999999999999999988874 4688899998753 12245799887643
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||.|.++..
T Consensus 162 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 162 HSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 34456788899999999999998643
No 166
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.90 E-value=2.7e-05 Score=70.52 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=71.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..+...+. .+. +|+++|+|+..++.++++++.+++. ++++..+|+..+ ......||+|+..-
T Consensus 46 cG~G~~~~~l~~-~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~l----~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 46 TGGGHVANAFAP-FVK-KVVAFDLTEDILKVARAFIEGNGHQ-----QVEYVQGDAEQM----PFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CTTCHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCC-CC----CSCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-hCC-EEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEecHHhC----CCCCCCEEEEEEhhhhH
Confidence 789999988877 454 8999999999999999999988763 578889998653 12345899998763
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|.++.
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2334578888999999999999854
No 167
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.89 E-value=9.1e-06 Score=71.35 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=69.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .+ .+|+++|+|+.+++.+++|+..+ .++++.++|+.++. ....||+|+...
T Consensus 60 cG~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~-----~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 60 CAAGAFTEKLAP-HC-KRLTVIDVMPRAIGRACQRTKRW-------SHISWAATDILQFS-----TAELFDLIVVAEVLY 125 (216)
T ss_dssp CTTSHHHHHHGG-GE-EEEEEEESCHHHHHHHHHHTTTC-------SSEEEEECCTTTCC-----CSCCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-cC-CEEEEEECCHHHHHHHHHhcccC-------CCeEEEEcchhhCC-----CCCCccEEEEccHHH
Confidence 799999999887 45 48999999999999999998753 25788999987653 246899998864
Q ss_pred C-CCC---HHHHHHHHHhcccCCEEEEEec
Q 019408 79 F-GSD---SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 y-gsp---~~fld~al~~v~~gGlL~vt~T 104 (341)
+ ..+ ..++..+.+.|++||.|+++..
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 1 222 2457788899999999998553
No 168
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.89 E-value=6.3e-06 Score=81.69 Aligned_cols=95 Identities=19% Similarity=0.169 Sum_probs=73.5
Q ss_pred CccccHhHHHHhhhC-------------CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc
Q 019408 1 MCGCGIRSLRYLAEA-------------KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK 67 (341)
Q Consensus 1 fagsG~rgir~a~e~-------------ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~ 67 (341)
.||||.+.+.++... ....++.+|+|+.++++++.|+.+.++. .....+.++|+.... .
T Consensus 179 acGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~---~~~~~i~~gD~l~~~-----~ 250 (445)
T 2okc_A 179 ACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG---TDRSPIVCEDSLEKE-----P 250 (445)
T ss_dssp TCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC---SSCCSEEECCTTTSC-----C
T ss_pred CCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC---cCCCCEeeCCCCCCc-----c
Confidence 389999999887641 1246999999999999999999998873 114567899986431 1
Q ss_pred CCcccEEEeCC-CCCC--------------------HHHHHHHHHhcccCCEEEEEe
Q 019408 68 REFFDLIDIDS-FGSD--------------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 68 ~~~fDvIdlDP-ygsp--------------------~~fld~al~~v~~gGlL~vt~ 103 (341)
..+||+|+.+| |+.. ..|+..+++.|++||.+++..
T Consensus 251 ~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 251 STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 24799999998 7641 268999999999999998744
No 169
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.88 E-value=2.1e-05 Score=73.08 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=73.2
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHHHHHHHh--hhcCCcccEEEeC
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDANRVLSEC--YLKREFFDLIDID 77 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~~~l~~~--~~~~~~fDvIdlD 77 (341)
||+|..++.++... ...+|+++|+|+..++.+++|++.+ +.. .++++.++|+.++-... ......||+|+..
T Consensus 45 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~ 120 (299)
T 3g5t_A 45 CGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY----KNVSFKISSSDDFKFLGADSVDKQKIDMITAV 120 (299)
T ss_dssp CTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC----TTEEEEECCTTCCGGGCTTTTTSSCEEEEEEE
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC----CceEEEEcCHHhCCccccccccCCCeeEEeHh
Confidence 79999999999642 5678999999999999999999986 322 47889999997642110 0001589999876
Q ss_pred C---CCCCHHHHHHHHHhcccCCEEEE
Q 019408 78 S---FGSDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 78 P---ygsp~~fld~al~~v~~gGlL~v 101 (341)
- +-.+..++..+.+.|++||.|++
T Consensus 121 ~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 121 ECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 4 11456888999999999999987
No 170
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.87 E-value=1.1e-05 Score=82.18 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=74.7
Q ss_pred CccccHhHHHHhhh---CC---------------CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCc----cEEEEeccHH
Q 019408 1 MCGCGIRSLRYLAE---AK---------------ADFVMANDGNDAHRRVILGNLKSIERGSGDEK----RWVVTHFDAN 58 (341)
Q Consensus 1 fagsG~rgir~a~e---~g---------------a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~----~~~v~~~DA~ 58 (341)
.||||.+.+.++.. .+ ...++.+|+|+.++++++.|+.++++. . ...+.++|+.
T Consensus 177 aCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~----~~~~~~~~I~~gDtL 252 (541)
T 2ar0_A 177 AAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIE----GNLDHGGAIRLGNTL 252 (541)
T ss_dssp TCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCC----CBGGGTBSEEESCTT
T ss_pred CcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCC----ccccccCCeEeCCCc
Confidence 48999999888753 11 136999999999999999999988873 1 1568899987
Q ss_pred HHHHHhhhcCCcccEEEeCC-CCCC-----------------HHHHHHHHHhcccCCEEEEEec
Q 019408 59 RVLSECYLKREFFDLIDIDS-FGSD-----------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 59 ~~l~~~~~~~~~fDvIdlDP-ygsp-----------------~~fld~al~~v~~gGlL~vt~T 104 (341)
..... ...+||+|+.+| |+.. ..|+..+++.|++||.+++..+
T Consensus 253 ~~~~~---~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 253 GSDGE---NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SHHHH---TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccc---cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 54321 235799999999 7642 1589999999999999997543
No 171
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.86 E-value=2.8e-05 Score=69.18 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=65.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||||..++..+...|..+|+++|+|+.+++.+.++++.. .++.++.+|+......... .+.||+|+.|-...
T Consensus 66 cGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~-~~~fD~V~~~~~~~ 137 (210)
T 1nt2_A 66 AASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-------NNIIPLLFDASKPWKYSGI-VEKVDLIYQDIAQK 137 (210)
T ss_dssp CTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-------SSEEEECSCTTCGGGTTTT-CCCEEEEEECCCST
T ss_pred CcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-------CCeEEEEcCCCCchhhccc-ccceeEEEEeccCh
Confidence 799999998887544468999999999998888877643 2456678887653110011 25799999995221
Q ss_pred C--HHHHHHHHHhcccCCEEEEE
Q 019408 82 D--SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p--~~fld~al~~v~~gGlL~vt 102 (341)
. ..++..+.+.|++||.|.+.
T Consensus 138 ~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 138 NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 12367788899999999985
No 172
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.86 E-value=1.8e-05 Score=78.49 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=70.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHH-------HHHHHHcCCCCCCCccEEEEeccHHHH---HHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVI-------LGNLKSIERGSGDEKRWVVTHFDANRV---LSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i-------~~N~~~n~~~~~~~~~~~v~~~DA~~~---l~~~~~~~~~f 71 (341)
||||..++.+|...|+.+|+++|+|+.+++.+ ++|++.+++. ..++++.++|+... +... ...|
T Consensus 251 CGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---~~nV~~i~gD~~~~~~~~~~~---~~~F 324 (433)
T 1u2z_A 251 SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---LNNVEFSLKKSFVDNNRVAEL---IPQC 324 (433)
T ss_dssp CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC---CCCEEEEESSCSTTCHHHHHH---GGGC
T ss_pred CCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC---CCceEEEEcCccccccccccc---cCCC
Confidence 79999999999866777999999999999999 9999988731 03678888765421 2111 2479
Q ss_pred cEEEeCCCCC-C--HHHHHHHHHhcccCCEEEEE
Q 019408 72 DLIDIDSFGS-D--SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 72 DvIdlDPygs-p--~~fld~al~~v~~gGlL~vt 102 (341)
|+|++..+.. + ...+....+.|++||.|.+.
T Consensus 325 DvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 325 DVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp SEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred CEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 9999975322 1 23456777899999999974
No 173
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.86 E-value=1.4e-05 Score=71.32 Aligned_cols=92 Identities=20% Similarity=0.233 Sum_probs=71.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++|+...+.. .++++.++|+.++. ....||+|+.-. +.
T Consensus 75 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~-----~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 75 CGGGHDVVAMAS-PER-FVVGLDISESALAKANETYGSSPKA----EYFSFVKEDVFTWR-----PTELFDLIFDYVFFC 143 (235)
T ss_dssp CTTCHHHHHHCB-TTE-EEEEECSCHHHHHHHHHHHTTSGGG----GGEEEECCCTTTCC-----CSSCEEEEEEESSTT
T ss_pred CCCCHHHHHHHh-CCC-eEEEEECCHHHHHHHHHHhhccCCC----cceEEEECchhcCC-----CCCCeeEEEEChhhh
Confidence 799999998876 554 6999999999999999999865432 46889999987643 234899998643 21
Q ss_pred -----CCHHHHHHHHHhcccCCEEEEEec
Q 019408 81 -----SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 -----sp~~fld~al~~v~~gGlL~vt~T 104 (341)
.+..++..+.+.|++||.|.+...
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 234678888899999999997543
No 174
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.86 E-value=8.9e-06 Score=72.51 Aligned_cols=92 Identities=13% Similarity=0.167 Sum_probs=70.4
Q ss_pred ccccHhHHHHhhhCCC------CEEEEeeCCHHHHHHHHHHHHHcC-----CCCCCCccEEEEeccHHHHHHHhhhcCCc
Q 019408 2 CGCGIRSLRYLAEAKA------DFVMANDGNDAHRRVILGNLKSIE-----RGSGDEKRWVVTHFDANRVLSECYLKREF 70 (341)
Q Consensus 2 agsG~rgir~a~e~ga------~~V~~~Dis~~A~~~i~~N~~~n~-----~~~~~~~~~~v~~~DA~~~l~~~~~~~~~ 70 (341)
||+|..++.++...+. .+|+++|+|+.+++.+++|++.++ . .++++.++|+...+. ....
T Consensus 93 ~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~----~~~~ 163 (227)
T 1r18_A 93 SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS-----GQLLIVEGDGRKGYP----PNAP 163 (227)
T ss_dssp CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH-----TSEEEEESCGGGCCG----GGCS
T ss_pred CCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC-----CceEEEECCcccCCC----cCCC
Confidence 7899999988874343 489999999999999999998765 3 357888999875221 1257
Q ss_pred ccEEEeCCCCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 71 FDLIDIDSFGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 71 fDvIdlDPygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
||+|+++.--. .+.+.+.+.|++||.|.++..
T Consensus 164 fD~I~~~~~~~--~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 164 YNAIHVGAAAP--DTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEEEECSCBS--SCCHHHHHTEEEEEEEEEEES
T ss_pred ccEEEECCchH--HHHHHHHHHhcCCCEEEEEEe
Confidence 99999998221 234677889999999998653
No 175
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.85 E-value=1.4e-05 Score=68.44 Aligned_cols=79 Identities=16% Similarity=0.178 Sum_probs=62.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||||..++.++. .+ +|+++|+|+.+++. .+ ++++.++|+.+.+. ...||+|+.+| |.
T Consensus 32 cG~G~~~~~l~~-~~--~v~gvD~s~~~~~~------~~--------~~~~~~~d~~~~~~-----~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 32 TSTGVITEQLRK-RN--TVVSTDLNIRALES------HR--------GGNLVRADLLCSIN-----QESVDVVVFNPPYV 89 (170)
T ss_dssp CTTCHHHHHHTT-TS--EEEEEESCHHHHHT------CS--------SSCEEECSTTTTBC-----GGGCSEEEECCCCB
T ss_pred cCccHHHHHHHh-cC--cEEEEECCHHHHhc------cc--------CCeEEECChhhhcc-----cCCCCEEEECCCCc
Confidence 799999999988 56 99999999999988 12 34678999876322 25899999998 64
Q ss_pred C------------CHHHHHHHHHhcccCCEEEEEe
Q 019408 81 S------------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 s------------p~~fld~al~~v~~gGlL~vt~ 103 (341)
. ...++...++.+ +||.+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 2 136778888888 999999854
No 176
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.85 E-value=2.8e-05 Score=69.96 Aligned_cols=89 Identities=11% Similarity=0.140 Sum_probs=70.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|..+|+++|+|+.+++.+++++. . ..+++.++|+..+ ......||+|+..-
T Consensus 53 cG~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~---~-----~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 53 CGFGWHCIYAAE-HGAKKVLGIDLSERMLTEAKRKTT---S-----PVVCYEQKAIEDI----AIEPDAYNVVLSSLALH 119 (253)
T ss_dssp CTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHCC---C-----TTEEEEECCGGGC----CCCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHhhc---c-----CCeEEEEcchhhC----CCCCCCeEEEEEchhhh
Confidence 799999999887 587799999999999999999876 1 3578889998643 22346899998754
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|+++.
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 120 YIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 2335678888899999999999853
No 177
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.83 E-value=4.5e-05 Score=66.68 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=68.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .|+ +|+++|+|+.+++.++++ . ...+...|+.++.......+.+||+|+... +
T Consensus 61 ~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 61 CGEGWLLRALAD-RGI-EAVGVDGDRTLVDAARAA---G--------AGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp CTTCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHT---C--------SSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred CCCCHHHHHHHH-CCC-EEEEEcCCHHHHHHHHHh---c--------ccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 799999988887 465 799999999999999987 2 224578888876432223345699998764 2
Q ss_pred -CCCHHHHHHHHHhcccCCEEEEEec
Q 019408 80 -GSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 -gsp~~fld~al~~v~~gGlL~vt~T 104 (341)
..+..++..+.+.|++||.|+++..
T Consensus 128 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 128 HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 3356788999999999999998654
No 178
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.81 E-value=1.2e-05 Score=74.82 Aligned_cols=102 Identities=12% Similarity=0.086 Sum_probs=69.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCC-------------------------------------
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGS------------------------------------- 44 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~------------------------------------- 44 (341)
||+|..++.++...+..+|+++|+|+.+++.+++|++.++...
T Consensus 55 CG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 134 (292)
T 3g07_A 55 CNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASR 134 (292)
T ss_dssp CTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC--------------------------------------------
T ss_pred CCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccchhhhcc
Confidence 7999999999986566799999999999999999987654210
Q ss_pred ----------------CCCccEEEEeccHHHHHHHh-hhcCCcccEEEeCCCC----------CCHHHHHHHHHhcccCC
Q 019408 45 ----------------GDEKRWVVTHFDANRVLSEC-YLKREFFDLIDIDSFG----------SDSSFLRTVFNAVKRDG 97 (341)
Q Consensus 45 ----------------~~~~~~~v~~~DA~~~l~~~-~~~~~~fDvIdlDPyg----------sp~~fld~al~~v~~gG 97 (341)
.-..++++.++|+....... ......||+|+.---- .+..++..+.+.|++||
T Consensus 135 g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG 214 (292)
T 3g07_A 135 GPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGG 214 (292)
T ss_dssp -------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred CccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCc
Confidence 00035788888876322111 1134689999876510 12356778888999999
Q ss_pred EEEEEe
Q 019408 98 LLYLTS 103 (341)
Q Consensus 98 lL~vt~ 103 (341)
+|+++.
T Consensus 215 ~lil~~ 220 (292)
T 3g07_A 215 ILVLEP 220 (292)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999853
No 179
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.79 E-value=2.6e-05 Score=70.01 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=69.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC----
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID---- 77 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD---- 77 (341)
||+|..++..+. .|. +|+++|+|+.+++.+++|++.++. +++++++|+.++. ....||+|++.
T Consensus 50 cG~G~~~~~l~~-~~~-~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~-----~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 50 CGTGIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNL------KIEFLQGDVLEIA-----FKNEFDAVTMFFSTI 116 (252)
T ss_dssp CTTCHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTC------CCEEEESCGGGCC-----CCSCEEEEEECSSGG
T ss_pred CCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHhcCC------ceEEEECChhhcc-----cCCCccEEEEcCCch
Confidence 799999999987 565 799999999999999999987765 4678899987632 13579999864
Q ss_pred CCCC---CHHHHHHHHHhcccCCEEEEEe
Q 019408 78 SFGS---DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 Pygs---p~~fld~al~~v~~gGlL~vt~ 103 (341)
++-. ...++..+.+.|++||.+.++.
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1322 2356677788999999999854
No 180
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.77 E-value=2e-05 Score=68.50 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=67.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--y 79 (341)
||+|...+.++.+.|. +|+++|+|+.+++.+++|++.++. ++++.+.|+..+ ......||+|+..- +
T Consensus 32 cG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 32 AGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNF------KLNISKGDIRKL----PFKDESMSFVYSYGTIF 100 (209)
T ss_dssp CCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTC------CCCEEECCTTSC----CSCTTCEEEEEECSCGG
T ss_pred CCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC------ceEEEECchhhC----CCCCCceeEEEEcChHH
Confidence 6888887777665554 799999999999999999987653 356778888653 12245799998743 2
Q ss_pred CC----CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 GS----DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 gs----p~~fld~al~~v~~gGlL~vt~ 103 (341)
.. +..++..+.+.|++||.++++.
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 21 2356677788999999999854
No 181
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.77 E-value=5e-05 Score=64.01 Aligned_cols=84 Identities=15% Similarity=0.138 Sum_probs=65.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .+. +|+++|+|+.+++.++++ . .++++.+.| + ......||+|+... +
T Consensus 26 ~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~-----~-----~~v~~~~~d----~---~~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 26 CGNGFYCKYLLE-FAT-KLYCIDINVIALKEVKEK-----F-----DSVITLSDP----K---EIPDNSVDFILFANSFH 86 (170)
T ss_dssp CTTCTTHHHHHT-TEE-EEEEECSCHHHHHHHHHH-----C-----TTSEEESSG----G---GSCTTCEEEEEEESCST
T ss_pred CCCCHHHHHHHh-hcC-eEEEEeCCHHHHHHHHHh-----C-----CCcEEEeCC----C---CCCCCceEEEEEccchh
Confidence 799999999987 454 899999999999999998 2 256778888 1 12345899998765 2
Q ss_pred --CCCHHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gsp~~fld~al~~v~~gGlL~vt~T 104 (341)
..+..+++.+.+.|++||.+.++..
T Consensus 87 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 87 DMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp TCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 2345788899999999999998643
No 182
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.76 E-value=2.3e-05 Score=69.66 Aligned_cols=89 Identities=18% Similarity=0.203 Sum_probs=69.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|..+|+++|+|+.+++.+++++..+ ++++.++|+..+. .....||+|+...
T Consensus 52 ~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 52 CGFGWFCRWAHE-HGASYVLGLDLSEKMLARARAAGPDT--------GITYERADLDKLH----LPQDSFDLAYSSLALH 118 (243)
T ss_dssp CTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHTSCSS--------SEEEEECCGGGCC----CCTTCEEEEEEESCGG
T ss_pred CcCCHHHHHHHH-CCCCeEEEEcCCHHHHHHHHHhcccC--------CceEEEcChhhcc----CCCCCceEEEEecccc
Confidence 799999998887 57768999999999999999876532 4677888887532 2245799988764
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|.++.
T Consensus 119 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 119 YVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 2234577888899999999999854
No 183
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.75 E-value=4e-05 Score=68.08 Aligned_cols=88 Identities=17% Similarity=0.114 Sum_probs=68.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--y 79 (341)
||+|..++.++. . .+|+++|+|+.+++.+++|+..++. ++++.++|+.++. . ...||+|++.+ +
T Consensus 42 ~G~G~~~~~l~~-~--~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~----~-~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 42 CGTGTATLLLAD-H--YEVTGVDLSEEMLEIAQEKAMETNR------HVDFWVQDMRELE----L-PEPVDAITILCDSL 107 (243)
T ss_dssp CTTCHHHHHHTT-T--SEEEEEESCHHHHHHHHHHHHHTTC------CCEEEECCGGGCC----C-SSCEEEEEECTTGG
T ss_pred CCCCHHHHHHhh-C--CeEEEEECCHHHHHHHHHhhhhcCC------ceEEEEcChhhcC----C-CCCcCEEEEeCCch
Confidence 799999998887 3 6899999999999999999987653 4678889986531 1 35799999853 2
Q ss_pred --C-C---CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 --G-S---DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 --g-s---p~~fld~al~~v~~gGlL~vt~ 103 (341)
- . +..++..+.+.|++||.|.++.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 1 1 2346677788999999999844
No 184
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.75 E-value=3.5e-05 Score=78.58 Aligned_cols=100 Identities=12% Similarity=0.062 Sum_probs=75.9
Q ss_pred CccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC
Q 019408 1 MCGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID 77 (341)
Q Consensus 1 fagsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD 77 (341)
.||||.+-+.++.. .+...++.+|+++.++++++.|+.++++. .....+.++|+...-- ......+||+|+..
T Consensus 229 aCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~---~~~~~I~~gDtL~~d~-p~~~~~~fD~IvaN 304 (542)
T 3lkd_A 229 TMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP---IENQFLHNADTLDEDW-PTQEPTNFDGVLMN 304 (542)
T ss_dssp TCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEESCTTTSCS-CCSSCCCBSEEEEC
T ss_pred ccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC---cCccceEecceecccc-cccccccccEEEec
Confidence 48999999988775 24578999999999999999999999873 1357788999864300 00124579999999
Q ss_pred C-CCCC--------------------------HHHHHHHHHhcc-cCCEEEEEec
Q 019408 78 S-FGSD--------------------------SSFLRTVFNAVK-RDGLLYLTST 104 (341)
Q Consensus 78 P-ygsp--------------------------~~fld~al~~v~-~gGlL~vt~T 104 (341)
| |+.. ..|+..+++.|+ +||.+++-..
T Consensus 305 PPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 305 PPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp CCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred CCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 8 7531 027889999999 9999986443
No 185
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.72 E-value=6.5e-05 Score=69.26 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=69.3
Q ss_pred ccccHhHHHHhhhCC--CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-
Q 019408 2 CGCGIRSLRYLAEAK--ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS- 78 (341)
Q Consensus 2 agsG~rgir~a~e~g--a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP- 78 (341)
||||..++..++..+ ..+|+++|+|+..++.++++++..+.. .+++++++|+.++ .-+.||+|++-=
T Consensus 79 cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~----~~v~~~~~D~~~~------~~~~~d~v~~~~~ 148 (261)
T 4gek_A 79 CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP----TPVDVIEGDIRDI------AIENASMVVLNFT 148 (261)
T ss_dssp CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCTTTC------CCCSEEEEEEESC
T ss_pred CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC----ceEEEeecccccc------cccccccceeeee
Confidence 799999998887422 237999999999999999999876653 5788999998653 234699987642
Q ss_pred --CCCC---HHHHHHHHHhcccCCEEEEEe
Q 019408 79 --FGSD---SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 --ygsp---~~fld~al~~v~~gGlL~vt~ 103 (341)
|-.+ ..++....+.|++||.|.++.
T Consensus 149 l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 149 LQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 2212 135677888999999999853
No 186
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.70 E-value=2.5e-05 Score=69.30 Aligned_cols=87 Identities=14% Similarity=0.097 Sum_probs=67.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++..+. .+ .+|+++|+|+.+++.+++|+..++ ++++.++|+...+. ....||+|+++. +.
T Consensus 79 ~G~G~~~~~l~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~-------~v~~~~~d~~~~~~----~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 79 TGIGYYTALIAE-IV-DKVVSVEINEKMYNYASKLLSYYN-------NIKLILGDGTLGYE----EEKPYDRVVVWATAP 145 (231)
T ss_dssp CTTSHHHHHHHH-HS-SEEEEEESCHHHHHHHHHHHTTCS-------SEEEEESCGGGCCG----GGCCEEEEEESSBBS
T ss_pred CCCCHHHHHHHH-Hc-CEEEEEeCCHHHHHHHHHHHhhcC-------CeEEEECCcccccc----cCCCccEEEECCcHH
Confidence 799999998887 45 789999999999999999997553 46788999876221 235799999997 22
Q ss_pred CCHHHHHHHHHhcccCCEEEEEec
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt~T 104 (341)
.+.+.+.+.|++||.|+++..
T Consensus 146 ---~~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 146 ---TLLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ---SCCHHHHHTEEEEEEEEEEEC
T ss_pred ---HHHHHHHHHcCCCcEEEEEEc
Confidence 122567889999999998643
No 187
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.66 E-value=7.2e-05 Score=70.71 Aligned_cols=72 Identities=18% Similarity=0.038 Sum_probs=56.6
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC-CcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR-EFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~-~~fDvIdlDP 78 (341)
.+|+|..++.++...+..+|+++|+|+.+++.+++|++.++ . +++++++|+..+-......+ ..||.|++||
T Consensus 34 g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~-----~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 34 TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-D-----RVSLFKVSYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-T-----TEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred eCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-C-----cEEEEECCHHHHHHHHHhcCCCCCCEEEEcC
Confidence 48999999999885335689999999999999999998775 2 67899999876532221112 4799999999
No 188
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.66 E-value=0.0001 Score=65.55 Aligned_cols=88 Identities=14% Similarity=0.090 Sum_probs=68.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|+ +|+++|+|+.+++.+++|... ..+++.++|+..+ ......||+|+.--
T Consensus 62 ~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 62 CGDGYGTYKLSR-TGY-KAVGVDISEVMIQKGKERGEG--------PDLSFIKGDLSSL----PFENEQFEAIMAINSLE 127 (242)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHTTTCB--------TTEEEEECBTTBC----SSCTTCEEEEEEESCTT
T ss_pred CCCCHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhccc--------CCceEEEcchhcC----CCCCCCccEEEEcChHh
Confidence 799999998887 465 799999999999999988521 3577889998753 12346899887654
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|+++.
T Consensus 128 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 128 WTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp SSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 2234578889999999999999864
No 189
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.66 E-value=0.00048 Score=61.43 Aligned_cols=86 Identities=17% Similarity=0.186 Sum_probs=66.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|+ +|+++|+|+.+++.+++| + ++.+.|+.+++... ....||+|+..-
T Consensus 50 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~-----~--------~~~~~d~~~~~~~~--~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 50 CGRGEFLELCKE-EGI-ESIGVDINEDMIKFCEGK-----F--------NVVKSDAIEYLKSL--PDKYLDGVMISHFVE 112 (240)
T ss_dssp CTTTHHHHHHHH-HTC-CEEEECSCHHHHHHHHTT-----S--------EEECSCHHHHHHTS--CTTCBSEEEEESCGG
T ss_pred CCCCHHHHHHHh-CCC-cEEEEECCHHHHHHHHhh-----c--------ceeeccHHHHhhhc--CCCCeeEEEECCchh
Confidence 799999988777 476 499999999999998886 3 35789998876432 246899998753
Q ss_pred -CCCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+ ..++..+.+.|++||.|.++..
T Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 113 HLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp GSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred hCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 2223 4778888899999999998654
No 190
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.65 E-value=5e-05 Score=69.33 Aligned_cols=93 Identities=11% Similarity=-0.034 Sum_probs=70.0
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
||||......|.--| ..+|+++|++++.++.+++|++.. .++..+..|+...... ......+|+|+.|..-
T Consensus 86 ~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-------~ni~~V~~d~~~p~~~-~~~~~~vDvVf~d~~~ 157 (233)
T 4df3_A 86 IASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-------RNIFPILGDARFPEKY-RHLVEGVDGLYADVAQ 157 (233)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-------TTEEEEESCTTCGGGG-TTTCCCEEEEEECCCC
T ss_pred CcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-------cCeeEEEEeccCcccc-ccccceEEEEEEeccC
Confidence 799999999987534 368999999999999999987643 2456677887654322 2223579999999843
Q ss_pred C--CHHHHHHHHHhcccCCEEEEE
Q 019408 81 S--DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 s--p~~fld~al~~v~~gGlL~vt 102 (341)
. +..++..+.+.||+||.+++.
T Consensus 158 ~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 158 PEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhHHHHHHHHHHhccCCCEEEEE
Confidence 2 235778888999999999974
No 191
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.64 E-value=7.3e-05 Score=72.39 Aligned_cols=99 Identities=11% Similarity=0.086 Sum_probs=74.1
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHc-----C-CCCCCCccEEEEeccHHHHHHHh--hhcCCccc
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSI-----E-RGSGDEKRWVVTHFDANRVLSEC--YLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n-----~-~~~~~~~~~~v~~~DA~~~l~~~--~~~~~~fD 72 (341)
||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+ + .. ..++++.++|+.++.... ......||
T Consensus 92 cG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~---~~~v~~~~~d~~~l~~~~~~~~~~~~fD 168 (383)
T 4fsd_A 92 CGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS---RSNVRFLKGFIENLATAEPEGVPDSSVD 168 (383)
T ss_dssp CTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT---CCCEEEEESCTTCGGGCBSCCCCTTCEE
T ss_pred CccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC---CCceEEEEccHHHhhhcccCCCCCCCEE
Confidence 799999999987532 358999999999999999999866 3 21 136788999987642100 12245899
Q ss_pred EEEeCC----CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 73 LIDIDS----FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 73 vIdlDP----ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+|+... +..+..++..+.+.|++||+|.++.
T Consensus 169 ~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 169 IVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 998776 2334578889999999999999853
No 192
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.64 E-value=0.00052 Score=62.41 Aligned_cols=93 Identities=13% Similarity=-0.041 Sum_probs=61.5
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||||..+...+...| ..+|+++|+|+..++.+.+.++.. .+++++.+|+..... ...-.+.||+|+.|- .
T Consensus 85 ~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-------~nv~~i~~Da~~~~~-~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 85 AASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-------PNIFPLLADARFPQS-YKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp CTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-------TTEEEEECCTTCGGG-TTTTCCCEEEEEECCCC
T ss_pred ecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-------CCeEEEEcccccchh-hhccccceEEEEecCCC
Confidence 799999988876423 458999999999886555555432 246788999875321 111135799999995 2
Q ss_pred CCCHHHHH-HHHHhcccCCEEEEE
Q 019408 80 GSDSSFLR-TVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 gsp~~fld-~al~~v~~gGlL~vt 102 (341)
-.....+. .+-+.|++||.|.+.
T Consensus 157 ~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 157 PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 11122233 333489999999975
No 193
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.63 E-value=0.00011 Score=63.70 Aligned_cols=87 Identities=9% Similarity=-0.088 Sum_probs=67.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..+..++. .|. +|+++|+|+.+++.+++|.. ++++.++|+.++- .....||+|+..- +
T Consensus 50 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~ 113 (203)
T 3h2b_A 50 SGTGRWTGHLAS-LGH-QIEGLEPATRLVELARQTHP----------SVTFHHGTITDLS----DSPKRWAGLLAWYSLI 113 (203)
T ss_dssp CTTCHHHHHHHH-TTC-CEEEECCCHHHHHHHHHHCT----------TSEEECCCGGGGG----GSCCCEEEEEEESSST
T ss_pred CCCCHHHHHHHh-cCC-eEEEEeCCHHHHHHHHHhCC----------CCeEEeCcccccc----cCCCCeEEEEehhhHh
Confidence 799999998887 566 69999999999999998722 4567889987632 2346899998854 1
Q ss_pred -C---CCHHHHHHHHHhcccCCEEEEEec
Q 019408 80 -G---SDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 -g---sp~~fld~al~~v~~gGlL~vt~T 104 (341)
- .+..++..+.+.|++||.|.++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 114 HMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp TCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1 235778888999999999998654
No 194
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.62 E-value=2.5e-05 Score=79.66 Aligned_cols=96 Identities=10% Similarity=-0.022 Sum_probs=72.1
Q ss_pred CccccHhHHHHhhhC-------C--------CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhh
Q 019408 1 MCGCGIRSLRYLAEA-------K--------ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECY 65 (341)
Q Consensus 1 fagsG~rgir~a~e~-------g--------a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~ 65 (341)
.||||.+-+.++... + ...++.+|+++.++++++.|+.++++. ..+.+.++|+... ..
T Consensus 252 aCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~i~i~~gDtL~~---~~ 324 (544)
T 3khk_A 252 AMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID----FNFGKKNADSFLD---DQ 324 (544)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC----CBCCSSSCCTTTS---CS
T ss_pred ccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC----cccceeccchhcC---cc
Confidence 489999988875421 1 347999999999999999999999874 3344478887532 11
Q ss_pred hcCCcccEEEeCC-CCCC--------------------------------HHHHHHHHHhcccCCEEEEEe
Q 019408 66 LKREFFDLIDIDS-FGSD--------------------------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 66 ~~~~~fDvIdlDP-ygsp--------------------------------~~fld~al~~v~~gGlL~vt~ 103 (341)
....+||+|+..| |+.. -.|+..+++.|++||.+++-.
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 1235899999999 8741 148999999999999988644
No 195
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.61 E-value=3.6e-05 Score=68.36 Aligned_cols=90 Identities=11% Similarity=0.137 Sum_probs=68.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..+...+......+|+++|+|+.+++.++++++.+ .++++.++|+.++.. ...||+|+... +
T Consensus 53 ~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~-----~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 53 AGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-------LKVKYIEADYSKYDF-----EEKYDMVVSALSIH 120 (234)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-------TTEEEEESCTTTCCC-----CSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-------CCEEEEeCchhccCC-----CCCceEEEEeCccc
Confidence 799999999887532468999999999999999987643 257788999875421 25899998876 2
Q ss_pred -CCCH---HHHHHHHHhcccCCEEEEEe
Q 019408 80 -GSDS---SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -gsp~---~fld~al~~v~~gGlL~vt~ 103 (341)
-... .++..+.+.|++||.|.++.
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2111 36788889999999999854
No 196
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.61 E-value=6.6e-05 Score=67.49 Aligned_cols=89 Identities=19% Similarity=0.135 Sum_probs=68.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .| .+|+++|+|+.+++.+++|+ .... .++++.++|+..+- .....||+|+..-
T Consensus 48 ~G~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~-~~~~-----~~~~~~~~d~~~~~----~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 48 VGTGRIALPLIA-RG-YRYIALDADAAMLEVFRQKI-AGVD-----RKVQVVQADARAIP----LPDESVHGVIVVHLWH 115 (263)
T ss_dssp CTTSTTHHHHHT-TT-CEEEEEESCHHHHHHHHHHT-TTSC-----TTEEEEESCTTSCC----SCTTCEEEEEEESCGG
T ss_pred CcCCHHHHHHHH-CC-CEEEEEECCHHHHHHHHHHh-hccC-----CceEEEEcccccCC----CCCCCeeEEEECCchh
Confidence 799999999987 45 47999999999999999998 2322 36788899986431 2345799998753
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEE
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt 102 (341)
+..+..++..+.+.|++||.|.++
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 223457788889999999999986
No 197
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.61 E-value=4.3e-05 Score=67.81 Aligned_cols=89 Identities=17% Similarity=0.164 Sum_probs=68.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++|+..++. ++++.++|+..+. . ...||+|+...
T Consensus 46 ~G~G~~~~~l~~-~~~-~~~~~D~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~----~-~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 46 CGTGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGL------KPRLACQDISNLN----I-NRKFDLITCCLDST 112 (246)
T ss_dssp CTTSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTC------CCEEECCCGGGCC----C-SCCEEEEEECTTGG
T ss_pred CCCCHHHHHHHH-CCC-cEEEEECCHHHHHHHHHHHhhcCC------CeEEEecccccCC----c-cCCceEEEEcCccc
Confidence 799999999887 464 699999999999999999987654 4577889987532 1 25799999854
Q ss_pred -CC----CCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FG----SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -yg----sp~~fld~al~~v~~gGlL~vt~ 103 (341)
+- .+..++..+.+.|++||.|.++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 22 12356677788999999999844
No 198
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.61 E-value=3.2e-05 Score=69.29 Aligned_cols=90 Identities=13% Similarity=0.071 Sum_probs=69.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .+..+|+++|+|+.+++.+++|+..+ ..+++.++|+..+ ......||+|+.-- +
T Consensus 102 ~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 102 AGIGRITKNLLT-KLYATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETA----TLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CTTTHHHHHTHH-HHCSEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGC----CCCSSCEEEEEEESCGG
T ss_pred CCcCHHHHHHHH-hhcCEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHC----CCCCCCeEEEEEcchhh
Confidence 799999998887 46778999999999999999988643 2577889998653 12345899998755 1
Q ss_pred -C---CCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 -G---SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -g---sp~~fld~al~~v~~gGlL~vt~ 103 (341)
- .+..++..+.+.|++||.|+++.
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 1 12466778889999999999864
No 199
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.60 E-value=4.7e-05 Score=70.63 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=70.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++|+..+++.. ..+++++++|+.++- . ...||+|++..
T Consensus 91 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~--~~~v~~~~~d~~~~~----~-~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 91 AGMGRLTFPFLD-LGW-EVTALELSTSVLAAFRKRLAEAPADV--RDRCTLVQGDMSAFA----L-DKRFGTVVISSGSI 161 (299)
T ss_dssp CTTTTTHHHHHT-TTC-CEEEEESCHHHHHHHHHHHHTSCHHH--HTTEEEEECBTTBCC----C-SCCEEEEEECHHHH
T ss_pred ccCCHHHHHHHH-cCC-eEEEEECCHHHHHHHHHHHhhccccc--ccceEEEeCchhcCC----c-CCCcCEEEECCccc
Confidence 799999999988 464 69999999999999999998764200 025788999987631 1 46899888542
Q ss_pred -CCCC---HHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSD---SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp---~~fld~al~~v~~gGlL~vt~T 104 (341)
+-.+ ..++..+.+.|++||.|.++.-
T Consensus 162 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 162 NELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp TTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 2222 4667788899999999998543
No 200
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.59 E-value=6.3e-05 Score=66.61 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=67.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++..+. .+. +|+++|+|+.+++.+++++.. .+++.++|+.++. ....||+|++--
T Consensus 51 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~~~~~-----~~~~fD~v~~~~~l~ 114 (250)
T 2p7i_A 51 SFKGDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKD---------GITYIHSRFEDAQ-----LPRRYDNIVLTHVLE 114 (250)
T ss_dssp CTTSHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCS---------CEEEEESCGGGCC-----CSSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-hCC-cEEEEeCCHHHHHHHHHhhhC---------CeEEEEccHHHcC-----cCCcccEEEEhhHHH
Confidence 799999998887 465 699999999999999987642 3567888987651 246799998732
Q ss_pred -CCCCHHHHHHHH-HhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVF-NAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al-~~v~~gGlL~vt~T 104 (341)
...+..++..+. +.|++||.|.++..
T Consensus 115 ~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 115 HIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp GCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 122457888899 99999999998653
No 201
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.58 E-value=0.00012 Score=65.56 Aligned_cols=92 Identities=12% Similarity=0.043 Sum_probs=68.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhh-hcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECY-LKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~-~~~~~fDvIdlDP-y 79 (341)
||+|..++.++. .+. +|+++|+|+.+++.+++|+.. .++++.++|+.++-.... ..+..||+|+..- +
T Consensus 65 cG~G~~~~~la~-~~~-~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 65 CGNGTQTKFLSQ-FFP-RVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp CTTSHHHHHHHH-HSS-CEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CCCCHHHHHHHH-hCC-CEEEEECCHHHHHHHHHhCcc--------cCceEEECcccccccccccccccCccEEEEcchh
Confidence 799999999988 465 799999999999999998731 257788999877543211 1122599998875 2
Q ss_pred --CC---CHHHHHHHHHhcccCCEEEEEe
Q 019408 80 --GS---DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 --gs---p~~fld~al~~v~~gGlL~vt~ 103 (341)
-. +..++..+.+.|++||.|++..
T Consensus 135 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 135 HHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp TTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 21 2467888889999999988754
No 202
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.58 E-value=7.5e-05 Score=65.05 Aligned_cols=87 Identities=16% Similarity=0.077 Sum_probs=67.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..+..++.. |+ +|+++|+|+.+++.+++ ++. .++++.++|+..+ .....||+|+..-
T Consensus 55 ~G~G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~----~~~-----~~~~~~~~d~~~~-----~~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 55 SGTGYWTRHLSGL-AD-RVTALDGSAEMIAEAGR----HGL-----DNVEFRQQDLFDW-----TPDRQWDAVFFAHWLA 118 (218)
T ss_dssp CTTSHHHHHHHHH-SS-EEEEEESCHHHHHHHGG----GCC-----TTEEEEECCTTSC-----CCSSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHhc-CC-eEEEEeCCHHHHHHHHh----cCC-----CCeEEEecccccC-----CCCCceeEEEEechhh
Confidence 7999999998884 65 89999999999999988 443 3678899998765 2356899998865
Q ss_pred CCCC---HHHHHHHHHhcccCCEEEEEec
Q 019408 79 FGSD---SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 ygsp---~~fld~al~~v~~gGlL~vt~T 104 (341)
+-.. ..++..+.+.|++||.|.++..
T Consensus 119 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 119 HVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1211 4567788899999999998643
No 203
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.58 E-value=0.00014 Score=67.73 Aligned_cols=95 Identities=14% Similarity=0.078 Sum_probs=68.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
||+|.+++-++.+.+..+++++|+|+.+++++++|+..|++ ..++...|... ...+..||+|.+==
T Consensus 141 CG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~------~~~~~v~D~~~-----~~p~~~~DvaL~lk--- 206 (281)
T 3lcv_B 141 CGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV------PHRTNVADLLE-----DRLDEPADVTLLLK--- 206 (281)
T ss_dssp CTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC------CEEEEECCTTT-----SCCCSCCSEEEETT---
T ss_pred cCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeeecc-----cCCCCCcchHHHHH---
Confidence 79999999999987788999999999999999999999988 25666777542 22356899996543
Q ss_pred CHHHHH--------HHHHhcccCCEEEEEecCCCCCCCC
Q 019408 82 DSSFLR--------TVFNAVKRDGLLYLTSTDGYSSGGH 112 (341)
Q Consensus 82 p~~fld--------~al~~v~~gGlL~vt~TD~~~l~g~ 112 (341)
..+.|+ ..++.|+.+|++. +-|+..+.|.
T Consensus 207 ti~~Le~q~kg~g~~ll~aL~~~~vvV--Sfp~ksl~Gr 243 (281)
T 3lcv_B 207 TLPCLETQQRGSGWEVIDIVNSPNIVV--TFPTKSLGQR 243 (281)
T ss_dssp CHHHHHHHSTTHHHHHHHHSSCSEEEE--EEECC-----
T ss_pred HHHHhhhhhhHHHHHHHHHhCCCCEEE--eccchhhcCC
Confidence 334443 5678899988877 3355556664
No 204
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.55 E-value=7.7e-05 Score=68.42 Aligned_cols=95 Identities=8% Similarity=0.057 Sum_probs=64.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH----------cCCCC--CCCccEEEEeccHHHHHHHhhhcCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS----------IERGS--GDEKRWVVTHFDANRVLSECYLKRE 69 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~----------n~~~~--~~~~~~~v~~~DA~~~l~~~~~~~~ 69 (341)
||+|..++..+. .|. +|+++|+|+.+++.++++... +++.. ....++++.++|+.++-.. ...
T Consensus 77 CG~G~~~~~La~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~---~~~ 151 (252)
T 2gb4_A 77 CGKAIEMKWFAD-RGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRA---NIG 151 (252)
T ss_dssp CTTCTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGG---CCC
T ss_pred CCCcHHHHHHHH-CCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcc---cCC
Confidence 799999988887 576 799999999999999776531 00000 0013578999999864321 125
Q ss_pred cccEEEeCC-CC--CC---HHHHHHHHHhcccCCEEEE
Q 019408 70 FFDLIDIDS-FG--SD---SSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 70 ~fDvIdlDP-yg--sp---~~fld~al~~v~~gGlL~v 101 (341)
.||+|+.-- |. .+ ..++....+.|++||.|.+
T Consensus 152 ~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 152 KFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp CEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 799987321 21 11 2467788899999999964
No 205
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.55 E-value=3.9e-05 Score=68.97 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=69.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++...| .+|+++|+|+.+++.+++++... .++++.++|+.++ ......||+|+..- +
T Consensus 64 ~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 64 SGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGN-------NKIIFEANDILTK----EFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSC-------TTEEEEECCTTTC----CCCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcC-------CCeEEEECccccC----CCCCCcEEEEeHHHHHH
Confidence 799999999988434 57999999999999999987643 2578889998753 12346899998764 1
Q ss_pred ----CCCHHHHHHHHHhcccCCEEEEEec
Q 019408 80 ----GSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 ----gsp~~fld~al~~v~~gGlL~vt~T 104 (341)
..+..++..+.+.|++||.|.++..
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 2234667788899999999998643
No 206
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.55 E-value=8.3e-05 Score=64.98 Aligned_cols=84 Identities=24% Similarity=0.298 Sum_probs=64.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .|+ +|+++|+|+.+++.+++|+ ++ .+.++|+..+- ....||+|+... +
T Consensus 52 cG~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~---~~--------~~~~~d~~~~~-----~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 52 CGAGYQAEAMLA-AGF-DVDATDGSPELAAEASRRL---GR--------PVRTMLFHQLD-----AIDAYDAVWAHACLL 113 (211)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHH---TS--------CCEECCGGGCC-----CCSCEEEEEECSCGG
T ss_pred CCCCHHHHHHHH-cCC-eEEEECCCHHHHHHHHHhc---CC--------ceEEeeeccCC-----CCCcEEEEEecCchh
Confidence 799999999987 465 7999999999999999987 23 23466665432 356899998876 2
Q ss_pred -C---CCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 -G---SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -g---sp~~fld~al~~v~~gGlL~vt~ 103 (341)
- .+..++..+.+.|++||.|+++.
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 114 HVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 12357788889999999999864
No 207
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.55 E-value=9.5e-05 Score=62.89 Aligned_cols=87 Identities=16% Similarity=0.043 Sum_probs=66.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++|+. ++++.+.|+..+ ......||+|+..| .
T Consensus 55 ~G~G~~~~~l~~-~~~-~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~----~~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 55 CGQGRIGGYLSK-QGH-DVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVD----QISETDFDLIVSAGNVM 118 (195)
T ss_dssp CTTTHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTS----CCCCCCEEEEEECCCCG
T ss_pred CCCCHHHHHHHH-CCC-cEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccC----CCCCCceeEEEECCcHH
Confidence 789999998887 454 79999999999999999763 245678887653 12245799999984 2
Q ss_pred --CC---CHHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GS---DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gs---p~~fld~al~~v~~gGlL~vt~T 104 (341)
-. ...++..+.+.|++||.+.++..
T Consensus 119 ~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 119 GFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 11 14677888899999999998543
No 208
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.52 E-value=4.2e-05 Score=67.30 Aligned_cols=94 Identities=6% Similarity=-0.078 Sum_probs=62.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCC--CC-----CCccEEEEeccHHHHHHHhhhcCCcccEE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERG--SG-----DEKRWVVTHFDANRVLSECYLKREFFDLI 74 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~--~~-----~~~~~~v~~~DA~~~l~~~~~~~~~fDvI 74 (341)
||+|..++..+. .|. +|+++|+|+.+++.++++.+..... .+ ...++++.++|+.++-... ...||+|
T Consensus 31 CG~G~~~~~la~-~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~---~~~fD~v 105 (203)
T 1pjz_A 31 CGKSQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD---IGHCAAF 105 (203)
T ss_dssp TCCSHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH---HHSEEEE
T ss_pred CCCcHhHHHHHH-CCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc---CCCEEEE
Confidence 799999998887 576 7999999999999999876531000 00 0025678899987653210 1379998
Q ss_pred EeC-CCCC-C----HHHHHHHHHhcccCCEEE
Q 019408 75 DID-SFGS-D----SSFLRTVFNAVKRDGLLY 100 (341)
Q Consensus 75 dlD-Pygs-p----~~fld~al~~v~~gGlL~ 100 (341)
+.- .+.. + ..++....+.|++||.+.
T Consensus 106 ~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 106 YDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred EECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 732 2211 1 136677788999999743
No 209
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.52 E-value=0.00011 Score=66.91 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=67.5
Q ss_pred ccccHhHHHHhhhCCC-CEEEEeeCCHH------HHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHH-HhhhcCCcccE
Q 019408 2 CGCGIRSLRYLAEAKA-DFVMANDGNDA------HRRVILGNLKSIERGSGDEKRWVVTHFDANRVLS-ECYLKREFFDL 73 (341)
Q Consensus 2 agsG~rgir~a~e~ga-~~V~~~Dis~~------A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~-~~~~~~~~fDv 73 (341)
||+|..++.++...|. .+|+++|+|+. .++.+++|++.+++. .++++.++| ++.. ........||+
T Consensus 52 cG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~----~~v~~~~~d--~~~~~~~~~~~~~fD~ 125 (275)
T 3bkx_A 52 CGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG----DRLTVHFNT--NLSDDLGPIADQHFDR 125 (275)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG----GGEEEECSC--CTTTCCGGGTTCCCSE
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC----CceEEEECC--hhhhccCCCCCCCEEE
Confidence 7999999999885344 68999999997 999999999987763 468888988 1111 11112457999
Q ss_pred EEeCC----CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 74 IDIDS----FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 74 IdlDP----ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
|+... +..+..+++..-.++++||.|.++..
T Consensus 126 v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 126 VVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 98865 23343444443344555999998654
No 210
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.49 E-value=5.4e-05 Score=66.41 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=65.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..+..++. .|. +|+++|+|+.+++.+++++. . ++++.++|+.++. .. ..||+|+..- +
T Consensus 54 cG~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~-~--------~~~~~~~d~~~~~----~~-~~fD~v~~~~~l~ 117 (220)
T 3hnr_A 54 VGTGNLTNKLLL-AGR-TVYGIEPSREMRMIAKEKLP-K--------EFSITEGDFLSFE----VP-TSIDTIVSTYAFH 117 (220)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHSC-T--------TCCEESCCSSSCC----CC-SCCSEEEEESCGG
T ss_pred CCCCHHHHHHHh-CCC-eEEEEeCCHHHHHHHHHhCC-C--------ceEEEeCChhhcC----CC-CCeEEEEECcchh
Confidence 799999999887 454 79999999999999999876 2 3456788886532 12 5899998875 2
Q ss_pred --CCCHH--HHHHHHHhcccCCEEEEEe
Q 019408 80 --GSDSS--FLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 --gsp~~--fld~al~~v~~gGlL~vt~ 103 (341)
..+.. ++..+.+.|++||.|.++.
T Consensus 118 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 118 HLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 11222 7888889999999999864
No 211
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.47 E-value=1.7e-05 Score=72.62 Aligned_cols=101 Identities=16% Similarity=0.006 Sum_probs=63.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCC-------------CC-----------CccEE-EEecc
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGS-------------GD-----------EKRWV-VTHFD 56 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~-------------~~-----------~~~~~-v~~~D 56 (341)
||+|+..+..+. .|+.+|+++|+|+.+++.++++++.+...- +. ...++ +.+.|
T Consensus 64 CG~G~~~~~~~~-~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D 142 (263)
T 2a14_A 64 SGPTIYQVLAAC-DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCD 142 (263)
T ss_dssp CTTCCGGGTTGG-GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECC
T ss_pred CCccHHHHHHHH-hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEecc
Confidence 688888877766 588899999999999999999987542100 00 01122 66777
Q ss_pred HHHHHHHhhhcCCcccEEEeC-------CC-CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 57 ANRVLSECYLKREFFDLIDID-------SF-GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 57 A~~~l~~~~~~~~~fDvIdlD-------Py-gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+...........||+|..= |. ......+....++||+||.|+++.
T Consensus 143 ~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 143 VHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp TTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 654210000013479998762 20 111245566678999999999853
No 212
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.45 E-value=7.4e-05 Score=77.38 Aligned_cols=88 Identities=26% Similarity=0.213 Sum_probs=68.5
Q ss_pred ccccHh---HHHHhhhCCCC--EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEe
Q 019408 2 CGCGIR---SLRYLAEAKAD--FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDI 76 (341)
Q Consensus 2 agsG~r---gir~a~e~ga~--~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdl 76 (341)
||+|++ +++++.+ ++. +|+++|.|+.|. ..+++++.|+.. ++++|+++|+.++ .-+++.|+|+-
T Consensus 366 aGrGpLv~~al~A~a~-~~~~vkVyAVEknp~A~-~a~~~v~~N~~~----dkVtVI~gd~eev-----~LPEKVDIIVS 434 (637)
T 4gqb_A 366 AGRGPLVNASLRAAKQ-ADRRIKLYAVEKNPNAV-VTLENWQFEEWG----SQVTVVSSDMREW-----VAPEKADIIVS 434 (637)
T ss_dssp CTTSHHHHHHHHHHHH-TTCEEEEEEEESCHHHH-HHHHHHHHHTTG----GGEEEEESCTTTC-----CCSSCEEEEEC
T ss_pred CCCcHHHHHHHHHHHh-cCCCcEEEEEECCHHHH-HHHHHHHhccCC----CeEEEEeCcceec-----cCCcccCEEEE
Confidence 799998 6666664 433 689999999776 567789999985 7899999999765 23679999999
Q ss_pred CCCCCC------HHHHHHHHHhcccCCEEE
Q 019408 77 DSFGSD------SSFLRTVFNAVKRDGLLY 100 (341)
Q Consensus 77 DPygsp------~~fld~al~~v~~gGlL~ 100 (341)
...|+- -.-++++=+.|++||++.
T Consensus 435 EwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 997651 134566667899999987
No 213
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.43 E-value=0.00019 Score=66.42 Aligned_cols=90 Identities=12% Similarity=0.004 Sum_probs=61.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||||..++.++. +|+ +|+++|+|+.+++.+++|++.+.+ ...+...+.. .. ......||+|+.+. +.
T Consensus 54 cGtG~~a~~La~-~g~-~V~gvD~S~~ml~~Ar~~~~~~~v------~~~~~~~~~~-~~---~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 54 ASTRFLIEKALE-RGA-SVTVFDFSQRMCDDLAEALADRCV------TIDLLDITAE-IP---KELAGHFDFVLNDRLIN 121 (261)
T ss_dssp TTCHHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHTSSSCC------EEEECCTTSC-CC---GGGTTCCSEEEEESCGG
T ss_pred CcchHHHHHHHh-cCC-EEEEEECCHHHHHHHHHHHHhccc------eeeeeecccc-cc---cccCCCccEEEEhhhhH
Confidence 799999999987 565 799999999999999999875422 2333222220 00 01135799999997 21
Q ss_pred --CC---HHHHHHHHHhcccCCEEEEEec
Q 019408 81 --SD---SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 --sp---~~fld~al~~v~~gGlL~vt~T 104 (341)
.+ ...+....+++ +||.|+++.-
T Consensus 122 ~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 122 RFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 11 12455566778 9999998653
No 214
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.43 E-value=0.00011 Score=65.83 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=66.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++......+|+++|+|+..++.+++|. .++++.++|+..+. ....||+|+...
T Consensus 42 ~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~-----~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 42 CGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATWK-----PAQKADLLYANAVFQ 106 (259)
T ss_dssp CTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTCC-----CSSCEEEEEEESCGG
T ss_pred CcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhcC-----ccCCcCEEEEeCchh
Confidence 799999998887422346999999999999999881 24567888987542 245799998865
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+..+..++..+.+.|++||.|.++.
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 107 WVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp GSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 2234577888889999999999855
No 215
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.41 E-value=9.3e-05 Score=65.84 Aligned_cols=82 Identities=18% Similarity=0.155 Sum_probs=64.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc-CCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK-REFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~-~~~fDvIdlDPyg 80 (341)
||+|..++.++.. |+ +|+++|+|+.+++.+++| . .++++.++|+.+.+. .. ...||+|+..+
T Consensus 57 cG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~-----~-----~~~~~~~~d~~~~~~---~~~~~~fD~v~~~~-- 119 (226)
T 3m33_A 57 CGHGPDAARFGPQ-AA-RWAAYDFSPELLKLARAN-----A-----PHADVYEWNGKGELP---AGLGAPFGLIVSRR-- 119 (226)
T ss_dssp CTTSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHH-----C-----TTSEEEECCSCSSCC---TTCCCCEEEEEEES--
T ss_pred CCCCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHh-----C-----CCceEEEcchhhccC---CcCCCCEEEEEeCC--
Confidence 7999999999884 64 899999999999999998 2 245678888853321 12 35899999874
Q ss_pred CCHHHHHHHHHhcccCCEEE
Q 019408 81 SDSSFLRTVFNAVKRDGLLY 100 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~ 100 (341)
.+..++..+.+.|++||.|.
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCSGGGGGHHHHEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEE
Confidence 23477888889999999999
No 216
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.40 E-value=5.8e-05 Score=73.24 Aligned_cols=84 Identities=18% Similarity=0.101 Sum_probs=65.3
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||||.+++.++... ...+|+++|+|+.+++.+ . ++++.++|+.... ...+||+|+.+| |
T Consensus 48 cGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~-----~~~~~~~D~~~~~-----~~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 48 CAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------P-----WAEGILADFLLWE-----PGEAFDLILGNPPY 108 (421)
T ss_dssp CTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------T-----TEEEEESCGGGCC-----CSSCEEEEEECCCC
T ss_pred CCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------C-----CCcEEeCChhhcC-----ccCCCCEEEECcCc
Confidence 89999999998743 356899999999998766 1 4578899987532 235899999998 7
Q ss_pred CCCH--------------------------------HHHHHHHHhcccCCEEEEEec
Q 019408 80 GSDS--------------------------------SFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gsp~--------------------------------~fld~al~~v~~gGlL~vt~T 104 (341)
+... .|++.+++.|++||.+++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 109 GIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp CCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 5321 568889999999999997543
No 217
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.40 E-value=5.6e-05 Score=68.44 Aligned_cols=90 Identities=9% Similarity=0.049 Sum_probs=64.9
Q ss_pred ccccHhHHHHhhh----CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH--HHHhhhcCCcccEEE
Q 019408 2 CGCGIRSLRYLAE----AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV--LSECYLKREFFDLID 75 (341)
Q Consensus 2 agsG~rgir~a~e----~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~--l~~~~~~~~~fDvId 75 (341)
||||..++..++. ....+|+++|+|+.+++.++ + .. .+++++++|+.+. +... ....||+|+
T Consensus 90 ~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-~-----~~----~~v~~~~gD~~~~~~l~~~--~~~~fD~I~ 157 (236)
T 2bm8_A 90 VYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-S-----DM----ENITLHQGDCSDLTTFEHL--REMAHPLIF 157 (236)
T ss_dssp CTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-G-----GC----TTEEEEECCSSCSGGGGGG--SSSCSSEEE
T ss_pred CCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-c-----cC----CceEEEECcchhHHHHHhh--ccCCCCEEE
Confidence 7999999988874 12468999999999988776 1 11 3678899998764 3221 223699999
Q ss_pred eCCC-CCCHHHHHHHHH-hcccCCEEEEEe
Q 019408 76 IDSF-GSDSSFLRTVFN-AVKRDGLLYLTS 103 (341)
Q Consensus 76 lDPy-gsp~~fld~al~-~v~~gGlL~vt~ 103 (341)
+|.- .....++..+.+ .|++||+|.+..
T Consensus 158 ~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 158 IDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 9873 223356677776 999999999843
No 218
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.39 E-value=3e-05 Score=69.83 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=68.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCC-------------CCC-----------CccE-EEEecc
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERG-------------SGD-----------EKRW-VVTHFD 56 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~-------------~~~-----------~~~~-~v~~~D 56 (341)
||+|..++..+. .|..+|+++|+|+.+++.++++++.++.. .+. ..++ ++.+.|
T Consensus 65 cG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d 143 (265)
T 2i62_A 65 SGPTIYQLLSAC-ESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCD 143 (265)
T ss_dssp CTTCCGGGTTGG-GTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECC
T ss_pred CCccHHHHHHhh-cccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEee
Confidence 789999988887 57678999999999999999998754210 000 0126 788888
Q ss_pred HHHHHHHhhhcCCcccEEEeCC-CC-------CCHHHHHHHHHhcccCCEEEEEe
Q 019408 57 ANRVLSECYLKREFFDLIDIDS-FG-------SDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 57 A~~~l~~~~~~~~~fDvIdlDP-yg-------sp~~fld~al~~v~~gGlL~vt~ 103 (341)
+.............||+|+.-- +. .+..++..+.+.|++||.|.++.
T Consensus 144 ~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 144 VTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp TTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred eccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 8754211111125799987642 11 13456777788999999999854
No 219
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.38 E-value=6.5e-05 Score=68.04 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=64.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--y 79 (341)
||+|..++.++. .|. +|+++|+|+.+++.+++++. ++++.++|+.++. . ...||+|+... +
T Consensus 59 cG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~----~-~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 59 CGTGMHLRHLAD-SFG-TVEGLELSADMLAIARRRNP----------DAVLHHGDMRDFS----L-GRRFSAVTCMFSSI 121 (263)
T ss_dssp CTTSHHHHHHTT-TSS-EEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTCC----C-SCCEEEEEECTTGG
T ss_pred CcCCHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCC----------CCEEEECChHHCC----c-cCCcCEEEEcCchh
Confidence 799999999987 464 79999999999999999754 3457788887532 1 46899998863 2
Q ss_pred C---C---CHHHHHHHHHhcccCCEEEEE
Q 019408 80 G---S---DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 g---s---p~~fld~al~~v~~gGlL~vt 102 (341)
. + ...++..+.+.|++||.|+++
T Consensus 122 ~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 122 GHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 1 224577888999999999984
No 220
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.37 E-value=0.00018 Score=62.67 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=63.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..+... |..+|+++|+|+.+++.+++|+ . .+++.++|+..+ ......||+|++.-
T Consensus 45 ~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~--~--------~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 106 (211)
T 2gs9_A 45 AGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA--P--------EATWVRAWGEAL----PFPGESFDVVLLFTTLE 106 (211)
T ss_dssp CTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC--T--------TSEEECCCTTSC----CSCSSCEEEEEEESCTT
T ss_pred CCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC--C--------CcEEEEcccccC----CCCCCcEEEEEEcChhh
Confidence 6888877655 5568999999999999999987 2 235678887642 12345799988764
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||.|.++..
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 107 FVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp TCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 22355778888999999999998643
No 221
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.36 E-value=0.00062 Score=63.97 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=64.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCc---cEEEEeccH----HHH-HHHhhhcCCcccE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEK---RWVVTHFDA----NRV-LSECYLKREFFDL 73 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~---~~~v~~~DA----~~~-l~~~~~~~~~fDv 73 (341)
||+|.....++. .+..+|+.+|+|+.+++.+++.+...+.. ... .+++.+.|+ ... |... .....||+
T Consensus 57 CG~G~~l~~~~~-~~~~~v~GiD~S~~~l~~A~~~~~~~~~~--~~~~~~~~~f~~~d~~~d~~~~~l~~~-~~~~~FD~ 132 (302)
T 2vdw_A 57 FGNGADLEKYFY-GEIALLVATDPDADAIARGNERYNKLNSG--IKTKYYKFDYIQETIRSDTFVSSVREV-FYFGKFNI 132 (302)
T ss_dssp CTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHCC------CCCEEEEEECCTTSSSHHHHHHTT-CCSSCEEE
T ss_pred cCCcHhHHHHHh-cCCCeEEEEECCHHHHHHHHHHHHhcccc--ccccccccchhhhhcccchhhhhhhcc-ccCCCeeE
Confidence 688877777776 46678999999999999999988755431 000 134445554 321 2211 12358999
Q ss_pred EEe--------CCCCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 74 IDI--------DSFGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 74 Idl--------DPygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
|.. ++-. ...++..+.+.|++||++.++..
T Consensus 133 V~~~~~lhy~~~~~~-~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 133 IDWQFAIHYSFHPRH-YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp EEEESCGGGTCSTTT-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECchHHHhCCHHH-HHHHHHHHHHHcCCCCEEEEEeC
Confidence 963 3321 24678888899999999998654
No 222
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.35 E-value=0.00017 Score=67.72 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=55.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++..+. .+ .+|+++|+|+.+++.+++|++.++. .+++++++|+.++. ...||+|+.|| |.
T Consensus 51 ~G~G~lt~~La~-~~-~~v~~vDi~~~~~~~a~~~~~~~~~-----~~v~~~~~D~~~~~------~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 51 CGTGNLTVKLLP-LA-KKVITIDIDSRMISEVKKRCLYEGY-----NNLEVYEGDAIKTV------FPKFDVCTANIPYK 117 (299)
T ss_dssp CTTSTTHHHHTT-TS-SEEEEECSCHHHHHHHHHHHHHTTC-----CCEEC----CCSSC------CCCCSEEEEECCGG
T ss_pred CcCcHHHHHHHh-cC-CEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECchhhCC------cccCCEEEEcCCcc
Confidence 799999999887 44 5899999999999999999998776 36788899986531 23799999998 54
Q ss_pred CCHHHHHHHH
Q 019408 81 SDSSFLRTVF 90 (341)
Q Consensus 81 sp~~fld~al 90 (341)
...+.+...+
T Consensus 118 ~~~~~~~~ll 127 (299)
T 2h1r_A 118 ISSPLIFKLI 127 (299)
T ss_dssp GHHHHHHHHH
T ss_pred cccHHHHHHH
Confidence 4445444433
No 223
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.31 E-value=0.00034 Score=72.97 Aligned_cols=94 Identities=16% Similarity=-0.020 Sum_probs=69.7
Q ss_pred ccccHhH---HHHhhhCC----------CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHH-hhhc
Q 019408 2 CGCGIRS---LRYLAEAK----------ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSE-CYLK 67 (341)
Q Consensus 2 agsG~rg---ir~a~e~g----------a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~-~~~~ 67 (341)
||+|+++ ++++++.| +.+|+++|.|+.|+..+++... |+.. ++++++++|+.++--- ....
T Consensus 418 aGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~----d~VtVI~gd~eev~lp~~~~~ 492 (745)
T 3ua3_A 418 GGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK----RRVTIIESDMRSLPGIAKDRG 492 (745)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT----TCSEEEESCGGGHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC----CeEEEEeCchhhcccccccCC
Confidence 7999996 55554333 3499999999999987777665 8885 6799999999887320 0112
Q ss_pred CCcccEEEeCCCCCC------HHHHHHHHHhcccCCEEE
Q 019408 68 REFFDLIDIDSFGSD------SSFLRTVFNAVKRDGLLY 100 (341)
Q Consensus 68 ~~~fDvIdlDPygsp------~~fld~al~~v~~gGlL~ 100 (341)
.++.|+|+-...|+- .+.++.+-+.|++||+++
T Consensus 493 ~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 493 FEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 468999999986642 146677778899999987
No 224
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.31 E-value=0.00025 Score=66.20 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=70.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCC--CCccEEEEeccHHHHHH--HhhhcCCcccEEEeC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSG--DEKRWVVTHFDANRVLS--ECYLKREFFDLIDID 77 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~--~~~~~~v~~~DA~~~l~--~~~~~~~~fDvIdlD 77 (341)
||+|..+..++. .+..+|+++|+|+.+++.+++++..++.... ...+++++++|+..+.. ........||+|+..
T Consensus 43 cG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~ 121 (313)
T 3bgv_A 43 CGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQ 121 (313)
T ss_dssp CTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEE
T ss_pred CCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEe
Confidence 789999998887 5677899999999999999999886521000 01357889999876420 010113479999865
Q ss_pred C-C----CC---CHHHHHHHHHhcccCCEEEEEe
Q 019408 78 S-F----GS---DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 P-y----gs---p~~fld~al~~v~~gGlL~vt~ 103 (341)
- + .+ +..++..+.+.|++||+++++.
T Consensus 122 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 122 FVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 3 2 11 1356777788999999999854
No 225
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.28 E-value=7.4e-05 Score=79.04 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=69.6
Q ss_pred CccccHhHHHHhhhCC---CCEEEEeeCCHHHHHHH--HHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEE
Q 019408 1 MCGCGIRSLRYLAEAK---ADFVMANDGNDAHRRVI--LGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLID 75 (341)
Q Consensus 1 fagsG~rgir~a~e~g---a~~V~~~Dis~~A~~~i--~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvId 75 (341)
+||||.+.+.++...+ ..+++++|+++.+++++ +.|+..|.+.-+. ....+...|.... ......+||+|+
T Consensus 329 aCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~---~~~~~~kFDVVI 404 (878)
T 3s1s_A 329 AAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSL---NPEDFANVSVVV 404 (878)
T ss_dssp TCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGC---CGGGGTTEEEEE
T ss_pred CCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcc---cccccCCCCEEE
Confidence 5899999999987533 24699999999999999 8888875542000 1224556665432 011235799999
Q ss_pred eCC-CCCC--------------------------------HHHHHHHHHhcccCCEEEEEe
Q 019408 76 IDS-FGSD--------------------------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 76 lDP-ygsp--------------------------------~~fld~al~~v~~gGlL~vt~ 103 (341)
.+| |+.. ..|+..+++.|++||.+++-.
T Consensus 405 gNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 405 MNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp ECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 999 8531 136778999999999999744
No 226
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.27 E-value=0.00019 Score=59.70 Aligned_cols=85 Identities=12% Similarity=-0.020 Sum_probs=60.7
Q ss_pred ccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHH-----HHhhhcCCcccEEE
Q 019408 2 CGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVL-----SECYLKREFFDLID 75 (341)
Q Consensus 2 agsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l-----~~~~~~~~~fDvId 75 (341)
||+|..++.++...|. .+|+++|+|+ ..+. .++++.+.|+.+.- ... .....||+|+
T Consensus 31 ~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~~-~~~~~~D~i~ 93 (180)
T 1ej0_A 31 AAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLER-VGDSKVQVVM 93 (180)
T ss_dssp CTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHHH-HTTCCEEEEE
T ss_pred CCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhcc-CCCCceeEEE
Confidence 7999999998875344 6899999999 5432 14567788886542 111 2235799999
Q ss_pred eCC-CC---CC-----------HHHHHHHHHhcccCCEEEEEe
Q 019408 76 IDS-FG---SD-----------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 76 lDP-yg---sp-----------~~fld~al~~v~~gGlL~vt~ 103 (341)
.|+ +. .+ ..++..+.+.+++||.+.++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 997 32 22 467788889999999999854
No 227
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.20 E-value=0.0005 Score=65.61 Aligned_cols=92 Identities=14% Similarity=0.030 Sum_probs=70.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++..+......+++.+|+ +.+++.+++|++.+++. +++++.++|+++.+ +..||+|++..
T Consensus 191 ~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~------~~~~D~v~~~~vl~ 259 (374)
T 1qzz_A 191 GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA----DRVTVAEGDFFKPL------PVTADVVLLSFVLL 259 (374)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT----TTEEEEECCTTSCC------SCCEEEEEEESCGG
T ss_pred CCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC----CceEEEeCCCCCcC------CCCCCEEEEecccc
Confidence 799999999987532357999999 99999999999988774 47889999986421 22499998865
Q ss_pred -CCCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+ ..++..+.+.|++||.|.+...
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 260 NWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2212 2567788899999998887553
No 228
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.19 E-value=0.00015 Score=65.11 Aligned_cols=94 Identities=16% Similarity=0.175 Sum_probs=65.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHH----HHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHR----RVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID 77 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~----~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD 77 (341)
||+|..++..+......+|+.+|+|+.++ +.+++|++..++. ++++.++|+..+-.. ....+|.|.+.
T Consensus 33 CG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-----~v~~~~~d~~~l~~~---~~d~v~~i~~~ 104 (225)
T 3p2e_A 33 TGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-----NVVFVIAAAESLPFE---LKNIADSISIL 104 (225)
T ss_dssp CTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-----SEEEECCBTTBCCGG---GTTCEEEEEEE
T ss_pred ccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-----CeEEEEcCHHHhhhh---ccCeEEEEEEe
Confidence 79999999998643345799999996555 5558888877763 578899998765110 11345555554
Q ss_pred C-CCC--------CHHHHHHHHHhcccCCEEEEEe
Q 019408 78 S-FGS--------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 P-ygs--------p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ +.+ +..++...-+.|++||.+.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 105 FPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp SCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 3 211 2356777788999999999833
No 229
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.17 E-value=0.00015 Score=63.73 Aligned_cols=92 Identities=13% Similarity=0.137 Sum_probs=65.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHH----HcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLK----SIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID 77 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~----~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD 77 (341)
||+|..++.++......+|+++|+|+.+++.+.++++ ..++ .++++.++|+.++- ..... |.|++.
T Consensus 36 cG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~l~----~~~~~-d~v~~~ 105 (218)
T 3mq2_A 36 TGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-----PNLLYLWATAERLP----PLSGV-GELHVL 105 (218)
T ss_dssp CTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-----TTEEEEECCSTTCC----SCCCE-EEEEEE
T ss_pred CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-----CceEEEecchhhCC----CCCCC-CEEEEE
Confidence 7999999999885325689999999998876555443 3444 36788999987631 11223 777654
Q ss_pred C-CCC--------CHHHHHHHHHhcccCCEEEEEe
Q 019408 78 S-FGS--------DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 P-ygs--------p~~fld~al~~v~~gGlL~vt~ 103 (341)
. +.. +..++..+.+.|++||.|+++.
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 4 221 2477888899999999999854
No 230
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.16 E-value=0.00072 Score=63.29 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=70.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEe-CCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDI-DSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdl-DPyg 80 (341)
||+|..++..+......+++++|+| .+++.+++|++.+++. +++++..+|+.+. . . ...||+|++ +.+.
T Consensus 174 ~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~--~--~-~~~~D~v~~~~~l~ 243 (335)
T 2r3s_A 174 ASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA----SRYHTIAGSAFEV--D--Y-GNDYDLVLLPNFLH 243 (335)
T ss_dssp CTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG----GGEEEEESCTTTS--C--C-CSCEEEEEEESCGG
T ss_pred CCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC----cceEEEecccccC--C--C-CCCCcEEEEcchhc
Confidence 7899999999875333589999999 9999999999988773 4688999998753 1 1 234999988 4421
Q ss_pred -C--C--HHHHHHHHHhcccCCEEEEEec
Q 019408 81 -S--D--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 -s--p--~~fld~al~~v~~gGlL~vt~T 104 (341)
. + ..++..+.+.+++||.|.+...
T Consensus 244 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 244 HFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 1 1 3567788889999998887554
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.13 E-value=0.00047 Score=64.14 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=61.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
+|+|..+...+. .+ .+|+++|+|+..++.+++|++.++.. .+++++++|+.++ . -..||+|+.++ |.
T Consensus 37 ~G~G~lt~~L~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~D~~~~----~--~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 37 PGTGNMTVKLLE-KA-KKVVACELDPRLVAELHKRVQGTPVA----SKLQVLVGDVLKT----D--LPFFDTCVANLPYQ 104 (285)
T ss_dssp CTTSTTHHHHHH-HS-SEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEESCTTTS----C--CCCCSEEEEECCGG
T ss_pred CcccHHHHHHHh-hC-CEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEEcceecc----c--chhhcEEEEecCcc
Confidence 799999999987 45 48999999999999999999866552 4688999999753 1 12699999997 66
Q ss_pred CCHHHHHHHHHh
Q 019408 81 SDSSFLRTVFNA 92 (341)
Q Consensus 81 sp~~fld~al~~ 92 (341)
..++.+...+..
T Consensus 105 ~~~~~~~~~l~~ 116 (285)
T 1zq9_A 105 ISSPFVFKLLLH 116 (285)
T ss_dssp GHHHHHHHHHHC
T ss_pred cchHHHHHHHhc
Confidence 555666555543
No 232
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.08 E-value=0.00012 Score=64.82 Aligned_cols=84 Identities=12% Similarity=0.102 Sum_probs=63.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEE-e-CCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLID-I-DSF 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvId-l-DPy 79 (341)
||+|..++.++.. +. +|+++|+|+.+++.+++++. ++++.++|+..+. . ...||+|+ . +.+
T Consensus 49 ~G~G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~----------~~~~~~~d~~~~~----~-~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 49 CGTGTHLEHFTKE-FG-DTAGLELSEDMLTHARKRLP----------DATLHQGDMRDFR----L-GRKFSAVVSMFSSV 111 (239)
T ss_dssp CTTSHHHHHHHHH-HS-EEEEEESCHHHHHHHHHHCT----------TCEEEECCTTTCC----C-SSCEEEEEECTTGG
T ss_pred ccCCHHHHHHHHh-CC-cEEEEeCCHHHHHHHHHhCC----------CCEEEECCHHHcc----c-CCCCcEEEEcCchH
Confidence 7999999988874 54 89999999999999998742 3467788886531 1 45799998 3 232
Q ss_pred --C-C---CHHHHHHHHHhcccCCEEEEE
Q 019408 80 --G-S---DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 --g-s---p~~fld~al~~v~~gGlL~vt 102 (341)
- . ...++..+.+.|++||.|.++
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 1 135677888999999999984
No 233
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.08 E-value=0.00021 Score=64.69 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=61.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||||..+..++. .|+.+|+++|+|+.+++..++|...... .-..++. .+.........||.+..|. |.
T Consensus 46 cGtG~~t~~la~-~g~~~V~gvDis~~ml~~a~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~d~~~~D~v~~ 114 (232)
T 3opn_A 46 SSTGGFTDVMLQ-NGAKLVYALDVGTNQLAWKIRSDERVVV---------MEQFNFR-NAVLADFEQGRPSFTSIDVSFI 114 (232)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEECSSCCCCCHHHHTCTTEEE---------ECSCCGG-GCCGGGCCSCCCSEEEECCSSS
T ss_pred cCCCHHHHHHHh-cCCCEEEEEcCCHHHHHHHHHhCccccc---------cccceEE-EeCHhHcCcCCCCEEEEEEEhh
Confidence 799999999988 5888999999999999987765432211 0011111 1110001112368777887 66
Q ss_pred CCHHHHHHHHHhcccCCEEEEE
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt 102 (341)
+...++..+.+.|++||.+.+.
T Consensus 115 ~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 115 SLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CGGGTHHHHHHHSCTTCEEEEE
T ss_pred hHHHHHHHHHHhccCCCEEEEE
Confidence 6668889999999999999984
No 234
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.08 E-value=0.00056 Score=64.99 Aligned_cols=92 Identities=15% Similarity=0.006 Sum_probs=70.6
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++..+......+++.+|+ +.+++.+++|++.+++. +++++..+|+++.+ +..||+|++.. +
T Consensus 192 ~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~------~~~~D~v~~~~vl~ 260 (360)
T 1tw3_A 192 GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS----DRVDVVEGDFFEPL------PRKADAIILSFVLL 260 (360)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT----TTEEEEECCTTSCC------SSCEEEEEEESCGG
T ss_pred CcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC----CceEEEeCCCCCCC------CCCccEEEEccccc
Confidence 799999999988532357899999 99999999999988874 47889999986421 23499988755 2
Q ss_pred --CCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
..+ ..++..+.+.|++||.|.+...
T Consensus 261 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 261 NWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 211 2577888899999999987553
No 235
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.05 E-value=0.0011 Score=62.45 Aligned_cols=89 Identities=16% Similarity=0.050 Sum_probs=61.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEE-EeccHHHHHHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVV-THFDANRVLSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v-~~~DA~~~l~~~~~~~~~fDvIdlDP-y 79 (341)
||||.++..++. .|+.+|+++|+|+..++...++-. ++.. ...|+..+-.+ ......||+|..|- |
T Consensus 94 cGTG~~t~~L~~-~ga~~V~aVDvs~~mL~~a~r~~~----------rv~~~~~~ni~~l~~~-~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 94 ASTGGFTDVMLQ-NGAKLVYAVDVGTNQLVWKLRQDD----------RVRSMEQYNFRYAEPV-DFTEGLPSFASIDVSF 161 (291)
T ss_dssp CTTSHHHHHHHH-TTCSEEEEECSSSSCSCHHHHTCT----------TEEEECSCCGGGCCGG-GCTTCCCSEEEECCSS
T ss_pred CCccHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhCc----------ccceecccCceecchh-hCCCCCCCEEEEEeeH
Confidence 799999988877 699999999999988877333211 1111 12232211111 11123499999998 7
Q ss_pred CCCHHHHHHHHHhcccCCEEEEE
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt 102 (341)
-+....+....+.|++||.|.+.
T Consensus 162 ~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 162 ISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SCGGGTHHHHHHHSCTTCEEEEE
T ss_pred hhHHHHHHHHHHHcCcCCEEEEE
Confidence 77777888899999999999874
No 236
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.03 E-value=0.00037 Score=67.74 Aligned_cols=67 Identities=21% Similarity=0.055 Sum_probs=51.3
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHh----hhcCCcccEEEe
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSEC----YLKREFFDLIDI 76 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~----~~~~~~fDvIdl 76 (341)
|||+|.+++-+.. +|.+.|+++|+++.|+++.+.|.. ...++++|+.++..+. ......+|+|..
T Consensus 9 FsG~GGlslG~~~-aG~~~v~avE~d~~a~~t~~~N~~----------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 9 FSGVGGLSLGAAR-AGFDVKMAVEIDQHAINTHAINFP----------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp TCTTSHHHHHHHH-HTCEEEEEECSCHHHHHHHHHHCT----------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred ccCcCHHHHHHHH-CCCcEEEEEeCCHHHHHHHHHhCC----------CCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 8999999999877 699999999999999999999864 1235566766543221 112357999999
Q ss_pred CC
Q 019408 77 DS 78 (341)
Q Consensus 77 DP 78 (341)
+|
T Consensus 78 gp 79 (376)
T 3g7u_A 78 GP 79 (376)
T ss_dssp CC
T ss_pred cC
Confidence 99
No 237
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.98 E-value=0.0011 Score=59.87 Aligned_cols=85 Identities=18% Similarity=0.105 Sum_probs=64.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .|. +|+++|+|+.+++.++++.. . . +.++|+..+ ......||+|+...
T Consensus 63 cG~G~~~~~l~~-~~~-~v~gvD~s~~~l~~a~~~~~----~-----~--~~~~d~~~~----~~~~~~fD~v~~~~~~~ 125 (260)
T 2avn_A 63 GGTGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGV----K-----N--VVEAKAEDL----PFPSGAFEAVLALGDVL 125 (260)
T ss_dssp CTTCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTC----S-----C--EEECCTTSC----CSCTTCEEEEEECSSHH
T ss_pred CCcCHHHHHHHH-cCC-eEEEEeCCHHHHHHHHhhcC----C-----C--EEECcHHHC----CCCCCCEEEEEEcchhh
Confidence 799999998887 464 79999999999999998754 1 1 456776542 12245799998853
Q ss_pred -C-CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -F-GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -y-gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+ ..+..++..+.+.|++||.|.++.
T Consensus 126 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 126 SYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp HHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 2 335677888889999999999854
No 238
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.96 E-value=0.0063 Score=64.81 Aligned_cols=91 Identities=14% Similarity=0.053 Sum_probs=67.6
Q ss_pred ccccHhHHHHhhhCCC--CEEEEeeCCHHHHHHHHHHHHHc------CCCCCCCccEEEEeccHHHHHHHhhhcCCcccE
Q 019408 2 CGCGIRSLRYLAEAKA--DFVMANDGNDAHRRVILGNLKSI------ERGSGDEKRWVVTHFDANRVLSECYLKREFFDL 73 (341)
Q Consensus 2 agsG~rgir~a~e~ga--~~V~~~Dis~~A~~~i~~N~~~n------~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDv 73 (341)
||+|..++.++. .+. .+|+++|+|+.+++.++++++.. ++ .++++.++|+.++- .....||+
T Consensus 730 CGTG~lai~LAr-~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-----~nVefiqGDa~dLp----~~d~sFDl 799 (950)
T 3htx_A 730 CGSGSLLDSLLD-YPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-----KSATLYDGSILEFD----SRLHDVDI 799 (950)
T ss_dssp CSSSHHHHHHTS-SCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-----SEEEEEESCTTSCC----TTSCSCCE
T ss_pred CCCCHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-----CceEEEECchHhCC----cccCCeeE
Confidence 799999999987 453 68999999999999999987643 33 36889999987642 23457999
Q ss_pred EEeCC-C---CCCH--HHHHHHHHhcccCCEEEEEe
Q 019408 74 IDIDS-F---GSDS--SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 74 IdlDP-y---gsp~--~fld~al~~v~~gGlL~vt~ 103 (341)
|+.-- + ..+. .++..+.+.|++| +|+++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 98754 2 1121 3677888999998 766643
No 239
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.94 E-value=0.00047 Score=60.18 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=63.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..+..++.. | .+|+++|+|+.+++.+++|+. ++.+.|+..+. .......||+|+..-
T Consensus 41 ~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~------------~~~~~d~~~~~--~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 41 CSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD------------HVVLGDIETMD--MPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp CTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS------------EEEESCTTTCC--CCSCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC------------cEEEcchhhcC--CCCCCCccCEEEECChhh
Confidence 7899999988874 6 789999999999998887542 34567765421 111235799998753
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||.|.++..
T Consensus 105 ~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 105 HLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp GSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 22345778888899999999998543
No 240
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.94 E-value=0.0007 Score=61.34 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=63.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|+|..+..++...+..+|+++|+|+.+++.++++.. ++.+...|+..+ ......||+|+.-.
T Consensus 94 ~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~d~~~~----~~~~~~fD~v~~~~--- 156 (269)
T 1p91_A 94 CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP----------QVTFCVASSHRL----PFSDTSMDAIIRIY--- 156 (269)
T ss_dssp CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTSC----SBCTTCEEEEEEES---
T ss_pred CCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC----------CcEEEEcchhhC----CCCCCceeEEEEeC---
Confidence 6899999998874323579999999999999988642 345677787542 12235799888632
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
...++..+.+.|++||.|.+..
T Consensus 157 ~~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 157 APCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp CCCCHHHHHHHEEEEEEEEEEE
T ss_pred ChhhHHHHHHhcCCCcEEEEEE
Confidence 1256888899999999999854
No 241
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.93 E-value=0.0011 Score=60.46 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=65.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..++.++. .+ .+|+++|+|+..++.+++++ . ++++..+|+..+- . ...||+|+... +
T Consensus 66 cG~G~~~~~l~~-~~-~~v~gvD~s~~~~~~a~~~~--~--------~~~~~~~d~~~~~----~-~~~fD~v~~~~~l~ 128 (279)
T 3ccf_A 66 CGTGQLTEKIAQ-SG-AEVLGTDNAATMIEKARQNY--P--------HLHFDVADARNFR----V-DKPLDAVFSNAMLH 128 (279)
T ss_dssp CTTSHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHC--T--------TSCEEECCTTTCC----C-SSCEEEEEEESCGG
T ss_pred CCCCHHHHHHHh-CC-CeEEEEECCHHHHHHHHhhC--C--------CCEEEECChhhCC----c-CCCcCEEEEcchhh
Confidence 799999998887 55 47999999999999999876 1 2346778876531 1 35799998765 2
Q ss_pred --CCCHHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gsp~~fld~al~~v~~gGlL~vt~T 104 (341)
..+..++..+.+.|++||.|.++..
T Consensus 129 ~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 129 WVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 3355788889999999999998543
No 242
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.92 E-value=0.002 Score=59.37 Aligned_cols=101 Identities=13% Similarity=0.038 Sum_probs=65.6
Q ss_pred ccccHhHHHHhhhC------CC------CEEEEeeCCH---HH-----------HHHHHHHHHHc----------CCCCC
Q 019408 2 CGCGIRSLRYLAEA------KA------DFVMANDGND---AH-----------RRVILGNLKSI----------ERGSG 45 (341)
Q Consensus 2 agsG~rgir~a~e~------ga------~~V~~~Dis~---~A-----------~~~i~~N~~~n----------~~~~~ 45 (341)
.|||.-.+-.+... +. .+++.+|..| +- .++.+++++.- .++.
T Consensus 69 fGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~~~- 147 (257)
T 2qy6_A 69 FGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDE- 147 (257)
T ss_dssp CTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEEC--
T ss_pred CChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhheeccC-
Confidence 47887776654321 21 4789999887 22 23556665530 1110
Q ss_pred CCccEEEEeccHHHHHHHhhhc-CCcccEEEeCCCCC-------CHHHHHHHHHhcccCCEEEEEec
Q 019408 46 DEKRWVVTHFDANRVLSECYLK-REFFDLIDIDSFGS-------DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 46 ~~~~~~v~~~DA~~~l~~~~~~-~~~fDvIdlDPygs-------p~~fld~al~~v~~gGlL~vt~T 104 (341)
...+++++.+||.+.|...... ...||+|++|||.. ...+++...+.+++||.|.+ .|
T Consensus 148 ~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t-ys 213 (257)
T 2qy6_A 148 GRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT-FT 213 (257)
T ss_dssp -CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE-SC
T ss_pred CceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE-Ee
Confidence 0135779999999988764211 12699999999863 23688899999999999984 44
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.90 E-value=0.0039 Score=57.26 Aligned_cols=93 Identities=18% Similarity=0.073 Sum_probs=64.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC---C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID---S 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD---P 78 (341)
||+|.+++.++ +..++++.|||+.+++.+++|+..++. ...+...|.... ..+..||+|.+= |
T Consensus 114 CG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~------~~~~~v~D~~~~-----~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 114 CGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW------DFTFALQDVLCA-----PPAEAGDLALIFKLLP 179 (253)
T ss_dssp CTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC------EEEEEECCTTTS-----CCCCBCSEEEEESCHH
T ss_pred CCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeecccC-----CCCCCcchHHHHHHHH
Confidence 68899998887 667899999999999999999999886 456777786532 224589999554 2
Q ss_pred ----CCCCHHHHHHHHHhcccCCEEEEEecCCCCCCCC
Q 019408 79 ----FGSDSSFLRTVFNAVKRDGLLYLTSTDGYSSGGH 112 (341)
Q Consensus 79 ----ygsp~~fld~al~~v~~gGlL~vt~TD~~~l~g~ 112 (341)
-...+- ...++.|+.+|++. +=++..|.|.
T Consensus 180 ~LE~q~~~~~--~~ll~aL~~~~vvV--sfPtksl~Gr 213 (253)
T 3frh_A 180 LLEREQAGSA--MALLQSLNTPRMAV--SFPTRSLGGR 213 (253)
T ss_dssp HHHHHSTTHH--HHHHHHCBCSEEEE--EEECC-----
T ss_pred HhhhhchhhH--HHHHHHhcCCCEEE--EcChHHhcCC
Confidence 122222 27788899987776 3345556654
No 244
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.88 E-value=0.00031 Score=67.31 Aligned_cols=66 Identities=21% Similarity=0.126 Sum_probs=50.0
Q ss_pred CccccHhHHHHhhhCC--CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAK--ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~g--a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
|||+|.+++-+.+ +| ++.|+++|+++.|+++.+.|.... .++++|+.++...... ...+|+|..+|
T Consensus 9 FaG~Gg~~~g~~~-~G~~~~~v~~~E~d~~a~~~~~~N~~~~----------~~~~~Di~~~~~~~~~-~~~~D~l~~gp 76 (343)
T 1g55_A 9 YSGVGGMHHALRE-SCIPAQVVAAIDVNTVANEVYKYNFPHT----------QLLAKTIEGITLEEFD-RLSFDMILMSP 76 (343)
T ss_dssp TCTTCHHHHHHHH-HTCSEEEEEEECCCHHHHHHHHHHCTTS----------CEECSCGGGCCHHHHH-HHCCSEEEECC
T ss_pred CcCccHHHHHHHH-CCCCceEEEEEeCCHHHHHHHHHhcccc----------ccccCCHHHccHhHcC-cCCcCEEEEcC
Confidence 8999999999887 68 568999999999999999997521 2456776665422111 12599999999
No 245
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.87 E-value=0.0016 Score=55.73 Aligned_cols=85 Identities=16% Similarity=0.066 Sum_probs=57.6
Q ss_pred ccccHhHHHHhhhCCC---------CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEE-eccHHHHH-----HHhhh
Q 019408 2 CGCGIRSLRYLAEAKA---------DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVT-HFDANRVL-----SECYL 66 (341)
Q Consensus 2 agsG~rgir~a~e~ga---------~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~-~~DA~~~l-----~~~~~ 66 (341)
||+|..++..+...|. .+|+++|+|+.+ .+ ..++++ ++|+...- ... .
T Consensus 31 cG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-----~~~~~~~~~d~~~~~~~~~~~~~-~ 93 (196)
T 2nyu_A 31 AAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-----EGATFLCPADVTDPRTSQRILEV-L 93 (196)
T ss_dssp CCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-----TTCEEECSCCTTSHHHHHHHHHH-S
T ss_pred CCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-----CCCeEEEeccCCCHHHHHHHHHh-c
Confidence 7999999999886454 689999999832 12 234566 77754321 111 1
Q ss_pred cCCcccEEEeCC-CC---CC-----------HHHHHHHHHhcccCCEEEEEe
Q 019408 67 KREFFDLIDIDS-FG---SD-----------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 67 ~~~~fDvIdlDP-yg---sp-----------~~fld~al~~v~~gGlL~vt~ 103 (341)
.++.||+|+.|+ +. .. ..++..+.+.|++||.|+++.
T Consensus 94 ~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 94 PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 234799999986 21 11 245667889999999999853
No 246
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.84 E-value=0.00073 Score=63.49 Aligned_cols=92 Identities=17% Similarity=0.122 Sum_probs=70.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
+|+|..++..+......+++++|+ +.+++.+++|++..++. +++++..+|+++- .+..||+|++--
T Consensus 176 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~------~~~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 176 GGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG----ERVSLVGGDMLQE------VPSNGDIYLLSRIIG 244 (334)
T ss_dssp CTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT----TSEEEEESCTTTC------CCSSCSEEEEESCGG
T ss_pred CCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC----CcEEEecCCCCCC------CCCCCCEEEEchhcc
Confidence 799999999987533358999999 99999999999877653 4688899998751 124699998754
Q ss_pred -CCCCH--HHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDS--SFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~--~fld~al~~v~~gGlL~vt~T 104 (341)
+..+. .++..+.+++++||.|.+...
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 22122 567788889999999998643
No 247
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=96.77 E-value=0.0032 Score=59.13 Aligned_cols=92 Identities=12% Similarity=-0.047 Sum_probs=70.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++..+......+++.+|+ +..++..++++...++. +++++..+|++.- . +..||+|++=-
T Consensus 178 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~-----~-p~~~D~v~~~~vlh 246 (332)
T 3i53_A 178 GGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS----GRAQVVVGSFFDP-----L-PAGAGGYVLSAVLH 246 (332)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT----TTEEEEECCTTSC-----C-CCSCSEEEEESCGG
T ss_pred CChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC----cCeEEecCCCCCC-----C-CCCCcEEEEehhhc
Confidence 699999999987633457999999 99999999999987764 5788999998621 1 22799998743
Q ss_pred -CCCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+ ..++..+.++|++||.|.+...
T Consensus 247 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 1111 3567788889999999998654
No 248
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.77 E-value=0.0014 Score=62.02 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=71.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
+|+|..++..+......+++.+|+ +..++.++++++..++. +++++..+|+++... .....||+|++-- +
T Consensus 188 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~---~~~~~~D~v~~~~vlh 259 (352)
T 3mcz_A 188 GGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG----GRVEFFEKNLLDARN---FEGGAADVVMLNDCLH 259 (352)
T ss_dssp CTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG----GGEEEEECCTTCGGG---GTTCCEEEEEEESCGG
T ss_pred CCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC----CceEEEeCCcccCcc---cCCCCccEEEEecccc
Confidence 699999999988533467999999 88999999999988774 578999999875321 0234699998743 1
Q ss_pred --CCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
..+ ..++..+.++|++||.|.+...
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 260 YFDAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 111 4567788899999999998553
No 249
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=96.76 E-value=0.0021 Score=61.53 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=69.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
+|+|..++..+......+++.+|+ +..++.+++|++..++. +++++..+|+++.- . .-+..||+|++-- +.
T Consensus 188 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~--~-~~p~~~D~v~~~~vlh 259 (363)
T 3dp7_A 188 GNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS----ERIHGHGANLLDRD--V-PFPTGFDAVWMSQFLD 259 (363)
T ss_dssp CTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG----GGEEEEECCCCSSS--C-CCCCCCSEEEEESCST
T ss_pred CCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc----cceEEEEccccccC--C-CCCCCcCEEEEechhh
Confidence 699999999988633347999999 99999999999877663 57889999986420 0 0124799998733 11
Q ss_pred -CC----HHHHHHHHHhcccCCEEEEEec
Q 019408 81 -SD----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 -sp----~~fld~al~~v~~gGlL~vt~T 104 (341)
.+ ..++..+.++|++||.|.+...
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 260 CFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp TSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 12 2457778889999999988553
No 250
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=96.76 E-value=0.0027 Score=60.34 Aligned_cols=92 Identities=13% Similarity=0.026 Sum_probs=70.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
+|+|..++..+......+++.+|+ +.+++.+++|++.+++. +++++..+|+++.- -..+|+|++-- +
T Consensus 199 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~------~~~~D~v~~~~vlh 267 (359)
T 1x19_A 199 GGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA----DRMRGIAVDIYKES------YPEADAVLFCRILY 267 (359)
T ss_dssp CTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT----TTEEEEECCTTTSC------CCCCSEEEEESCGG
T ss_pred CcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC----CCEEEEeCccccCC------CCCCCEEEEechhc
Confidence 799999999988532357999999 99999999999988774 46889999987531 12359987754 2
Q ss_pred --CC--CHHHHHHHHHhcccCCEEEEEec
Q 019408 80 --GS--DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 --gs--p~~fld~al~~v~~gGlL~vt~T 104 (341)
.. +..++..+.+.|++||.|.+...
T Consensus 268 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 268 SANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 11 24567788889999999987554
No 251
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=96.75 E-value=0.0056 Score=58.61 Aligned_cols=92 Identities=16% Similarity=0.043 Sum_probs=70.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
+|+|..++..+......+++.+|+ +..++.+++++...++. +++++..+|.+.- . +..||+|++--
T Consensus 211 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~----~~v~~~~~d~~~~-----~-p~~~D~v~~~~vlh 279 (369)
T 3gwz_A 211 GGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA----DRCEILPGDFFET-----I-PDGADVYLIKHVLH 279 (369)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT----TTEEEEECCTTTC-----C-CSSCSEEEEESCGG
T ss_pred CCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC----CceEEeccCCCCC-----C-CCCceEEEhhhhhc
Confidence 699999999988533357999999 99999999999988764 5788999998721 1 23799998744
Q ss_pred -CCCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+ ..++..+.++|++||.|.+...
T Consensus 280 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 280 DWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1111 1467788889999999998543
No 252
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.72 E-value=0.00097 Score=58.24 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=55.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH-----HHHhhh--cCCcccEE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV-----LSECYL--KREFFDLI 74 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~-----l~~~~~--~~~~fDvI 74 (341)
||+|..++.++. . ..+|+++|+++.+ .. ..++++++|+.+. +..... ...+||+|
T Consensus 34 ~G~G~~s~~la~-~-~~~V~gvD~~~~~-----------~~-----~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~V 95 (191)
T 3dou_A 34 SSPGGWTQVLNS-L-ARKIISIDLQEME-----------EI-----AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDV 95 (191)
T ss_dssp CTTCHHHHHHTT-T-CSEEEEEESSCCC-----------CC-----TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred ecCCHHHHHHHH-c-CCcEEEEeccccc-----------cC-----CCeEEEEccccCHHHHHHHHHHhhcccCCcceEE
Confidence 799999999887 4 5689999999742 12 2456788887542 111111 01389999
Q ss_pred EeCCC--CCCH-------------HHHHHHHHhcccCCEEEEEe
Q 019408 75 DIDSF--GSDS-------------SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 75 dlDPy--gsp~-------------~fld~al~~v~~gGlL~vt~ 103 (341)
..|+. .+.. ..++.|.+.|++||.|.+.-
T Consensus 96 lsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 96 VSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 99972 2211 23446678999999999743
No 253
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=96.71 E-value=0.0012 Score=60.58 Aligned_cols=85 Identities=19% Similarity=0.145 Sum_probs=62.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||||..+...+. .| .+|+++|+|+..++.++++ .++++.++|+.++ ......||+|..-=
T Consensus 48 cGtG~~~~~l~~-~~-~~v~gvD~s~~ml~~a~~~-----------~~v~~~~~~~e~~----~~~~~sfD~v~~~~~~h 110 (257)
T 4hg2_A 48 CGSGQASLGLAE-FF-ERVHAVDPGEAQIRQALRH-----------PRVTYAVAPAEDT----GLPPASVDVAIAAQAMH 110 (257)
T ss_dssp CTTTTTHHHHHT-TC-SEEEEEESCHHHHHTCCCC-----------TTEEEEECCTTCC----CCCSSCEEEEEECSCCT
T ss_pred CCCCHHHHHHHH-hC-CEEEEEeCcHHhhhhhhhc-----------CCceeehhhhhhh----cccCCcccEEEEeeehh
Confidence 799999888876 56 5799999999988755421 2567888888643 23456899997643
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 79 FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+-.+..++..+.+.|++||.|++..
T Consensus 111 ~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 111 WFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp TCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 2234578888999999999998744
No 254
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=96.70 E-value=0.0012 Score=59.93 Aligned_cols=85 Identities=16% Similarity=0.061 Sum_probs=63.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++.++. .| .+|+++|+|+..++.++++. ++++.++|+.++ ....+.||+|+.--
T Consensus 43 cG~G~~~~~l~~-~~-~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 43 AGTGGYSVALAN-QG-LFVYAVEPSIVMRQQAVVHP-----------QVEWFTGYAENL----ALPDKSVDGVISILAIH 105 (261)
T ss_dssp CTTSHHHHHHHT-TT-CEEEEECSCHHHHHSSCCCT-----------TEEEECCCTTSC----CSCTTCBSEEEEESCGG
T ss_pred CcccHHHHHHHh-CC-CEEEEEeCCHHHHHHHHhcc-----------CCEEEECchhhC----CCCCCCEeEEEEcchHh
Confidence 799999999987 56 47999999998888766544 356778888642 12346899998765
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|+ ||.+.+...
T Consensus 106 ~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 106 HFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp GCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred hccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 2345678889999999 996666443
No 255
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.55 E-value=0.0023 Score=56.15 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=60.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
||+|..++..+. . +++|+|+.+++.+++| ++ ++.+.|+..+ ......||+|++.-
T Consensus 56 ~G~G~~~~~l~~-~-----~~vD~s~~~~~~a~~~----~~--------~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 113 (219)
T 1vlm_A 56 VGTGRFAVPLKI-K-----IGVEPSERMAEIARKR----GV--------FVLKGTAENL----PLKDESFDFALMVTTIC 113 (219)
T ss_dssp CTTSTTHHHHTC-C-----EEEESCHHHHHHHHHT----TC--------EEEECBTTBC----CSCTTCEEEEEEESCGG
T ss_pred CCCCHHHHHHHH-H-----hccCCCHHHHHHHHhc----CC--------EEEEcccccC----CCCCCCeeEEEEcchHh
Confidence 789999888765 3 8999999999999987 33 3567776542 12345799998764
Q ss_pred -CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||.|.++..
T Consensus 114 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 114 FVDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp GSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 23356788888999999999998654
No 256
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.53 E-value=0.011 Score=54.49 Aligned_cols=96 Identities=13% Similarity=-0.093 Sum_probs=65.0
Q ss_pred ccc---cHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHH-------hhhcCCcc
Q 019408 2 CGC---GIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSE-------CYLKREFF 71 (341)
Q Consensus 2 ags---G~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~-------~~~~~~~f 71 (341)
||+ |.....++......+|+.+|+|+..++..++++..+ ..++++++|+.+.-.. ....-..|
T Consensus 86 cG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~-------~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~ 158 (274)
T 2qe6_A 86 SGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-------PNTAVFTADVRDPEYILNHPDVRRMIDFSRP 158 (274)
T ss_dssp CCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-------TTEEEEECCTTCHHHHHHSHHHHHHCCTTSC
T ss_pred CCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC-------CCeEEEEeeCCCchhhhccchhhccCCCCCC
Confidence 577 877655544222258999999999999999988532 3578899998753110 00111368
Q ss_pred cEEEeCC---CCC---CHHHHHHHHHhcccCCEEEEEec
Q 019408 72 DLIDIDS---FGS---DSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 72 DvIdlDP---ygs---p~~fld~al~~v~~gGlL~vt~T 104 (341)
|+|.+-- |-. +...+....+.|++||.|.++..
T Consensus 159 d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 159 AAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 9887653 211 35678888899999999998543
No 257
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.52 E-value=0.0056 Score=62.34 Aligned_cols=65 Identities=17% Similarity=0.067 Sum_probs=54.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLID 75 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvId 75 (341)
||+|+.+...|. .|+ .|+.+|.++.+++.++..++.++. .++++.++|+.++.... ...+||+|.
T Consensus 75 CG~G~~~~~la~-~ga-~V~giD~~~~~i~~a~~~a~~~~~-----~~~~~~~~~~~~~~~~~--~~~~fD~v~ 139 (569)
T 4azs_A 75 CAQGFFSLSLAS-KGA-TIVGIDFQQENINVCRALAEENPD-----FAAEFRVGRIEEVIAAL--EEGEFDLAI 139 (569)
T ss_dssp CTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHTSTT-----SEEEEEECCHHHHHHHC--CTTSCSEEE
T ss_pred CCCcHHHHHHHh-CCC-EEEEECCCHHHHHHHHHHHHhcCC-----CceEEEECCHHHHhhhc--cCCCccEEE
Confidence 799999999998 687 599999999999999999987764 26788999999887643 235799883
No 258
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=96.46 E-value=0.0031 Score=61.10 Aligned_cols=89 Identities=15% Similarity=0.046 Sum_probs=62.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEE-EEeccHHHHHHHhhhcCCcccEEEeCC--
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWV-VTHFDANRVLSECYLKREFFDLIDIDS-- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~-v~~~DA~~~l~~~~~~~~~fDvIdlDP-- 78 (341)
||+|.....++. .|. +|+.+|+|+..++.++++ ++. .... +...|+..+-. ....||+|+.--
T Consensus 116 cG~G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~----~~~----~~~~~~~~~~~~~l~~----~~~~fD~I~~~~vl 181 (416)
T 4e2x_A 116 CNDGIMLRTIQE-AGV-RHLGFEPSSGVAAKAREK----GIR----VRTDFFEKATADDVRR----TEGPANVIYAANTL 181 (416)
T ss_dssp CTTTTTHHHHHH-TTC-EEEEECCCHHHHHHHHTT----TCC----EECSCCSHHHHHHHHH----HHCCEEEEEEESCG
T ss_pred CCCCHHHHHHHH-cCC-cEEEECCCHHHHHHHHHc----CCC----cceeeechhhHhhccc----CCCCEEEEEECChH
Confidence 689998888876 566 899999999999998876 332 1111 22344433321 235899998754
Q ss_pred --CCCCHHHHHHHHHhcccCCEEEEEec
Q 019408 79 --FGSDSSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 --ygsp~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+..++..+.+.|++||+|.++..
T Consensus 182 ~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 182 CHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 23456888999999999999998643
No 259
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.40 E-value=0.0032 Score=57.64 Aligned_cols=51 Identities=18% Similarity=0.384 Sum_probs=39.0
Q ss_pred EEEeccHHHHHHHhhhcCCcccEEEeCC-CCCC-----------------HHHHHHHHHhcccCCEEEEEe
Q 019408 51 VVTHFDANRVLSECYLKREFFDLIDIDS-FGSD-----------------SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 51 ~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygsp-----------------~~fld~al~~v~~gGlL~vt~ 103 (341)
+++++|+.++|..+. .++||+|++|| |+.. ...+..+.+.|+++|.++|..
T Consensus 6 ~l~~gD~~~~l~~l~--~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIHQMNCFDFLDQVE--NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEEECCHHHHHHHSC--TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEechHHHHHHhcc--ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 578999999998753 45899999999 8754 122345567899999999854
No 260
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.39 E-value=0.0017 Score=61.91 Aligned_cols=62 Identities=18% Similarity=0.091 Sum_probs=49.0
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
|||+|.+++-+.+ +|++.|+++|+++.|+++.+.|.... . ++|+.++.... -..+|+|..+|
T Consensus 18 FaG~Gg~~~g~~~-aG~~~v~~~e~d~~a~~t~~~N~~~~--------~----~~Di~~~~~~~---~~~~D~l~~gp 79 (327)
T 2c7p_A 18 FAGLGGFRLALES-CGAECVYSNEWDKYAQEVYEMNFGEK--------P----EGDITQVNEKT---IPDHDILCAGF 79 (327)
T ss_dssp TCTTTHHHHHHHH-TTCEEEEEECCCHHHHHHHHHHHSCC--------C----BSCGGGSCGGG---SCCCSEEEEEC
T ss_pred CCCcCHHHHHHHH-CCCeEEEEEeCCHHHHHHHHHHcCCC--------C----cCCHHHcCHhh---CCCCCEEEECC
Confidence 8999999999887 79999999999999999999997421 1 56666553321 12589999998
No 261
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.38 E-value=0.0037 Score=58.75 Aligned_cols=77 Identities=14% Similarity=0.035 Sum_probs=58.9
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
+|+|..+...+.. +.+|+++|+|+..++.+++|++. . .+++++++|+.++- .....||+|+.++ |.
T Consensus 59 ~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~--~-----~~v~vi~gD~l~~~----~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 59 LGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL--Y-----NNIEIIWGDALKVD----LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp CTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH--C-----SSEEEEESCTTTSC----GGGSCCSEEEEECCGG
T ss_pred CCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc--C-----CCeEEEECchhhCC----cccCCccEEEEeCccc
Confidence 7999999999873 46899999999999999999983 2 36789999997642 1123699999997 65
Q ss_pred CCHHHHHHHHH
Q 019408 81 SDSSFLRTVFN 91 (341)
Q Consensus 81 sp~~fld~al~ 91 (341)
...+.+...++
T Consensus 126 is~pil~~lL~ 136 (295)
T 3gru_A 126 ISSPITFKLIK 136 (295)
T ss_dssp GHHHHHHHHHH
T ss_pred ccHHHHHHHHh
Confidence 55566554443
No 262
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.36 E-value=0.0026 Score=54.77 Aligned_cols=85 Identities=14% Similarity=0.090 Sum_probs=55.2
Q ss_pred ccccHhHHHHhhhCC--CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHH------------------
Q 019408 2 CGCGIRSLRYLAEAK--ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVL------------------ 61 (341)
Q Consensus 2 agsG~rgir~a~e~g--a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l------------------ 61 (341)
||+|..++..+...+ ..+|+++|+|+.+ .. ..+++.++|+.+..
T Consensus 31 cG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-----~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 31 CYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-----PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp CTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-----TTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-----CCceEEEccccchhhhhhccccccccccchhh
Confidence 799999999987544 4689999999842 11 13455666664421
Q ss_pred -HHh--hhcCCcccEEEeCC-CCC-----CH---------HHHHHHHHhcccCCEEEEE
Q 019408 62 -SEC--YLKREFFDLIDIDS-FGS-----DS---------SFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 62 -~~~--~~~~~~fDvIdlDP-ygs-----p~---------~fld~al~~v~~gGlL~vt 102 (341)
... ......||+|+.|+ +.. .. ..+..+.+.|++||.++++
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 000 01235799999996 211 00 1455677899999999974
No 263
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.34 E-value=0.02 Score=52.62 Aligned_cols=99 Identities=8% Similarity=0.032 Sum_probs=64.9
Q ss_pred ccccHhHHHHhhh---C--CCC-EEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHHHHHHHhh--hcCCccc
Q 019408 2 CGCGIRSLRYLAE---A--KAD-FVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDANRVLSECY--LKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~--ga~-~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~~~l~~~~--~~~~~fD 72 (341)
||+|..++..+.. . ++. .++++|.|++.++..+++++.. ++. ...+.+...|+..+..... .....||
T Consensus 61 ~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~fD 137 (292)
T 2aot_A 61 GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE---NVKFAWHKETSSEYQSRMLEKKELQKWD 137 (292)
T ss_dssp CTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT---TEEEEEECSCHHHHHHHHHTTTCCCCEE
T ss_pred CCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC---cceEEEEecchhhhhhhhccccCCCcee
Confidence 7899877654322 1 332 3499999999999999998743 332 0234556788876542210 1245799
Q ss_pred EEEeCC----CCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 73 LIDIDS----FGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 73 vIdlDP----ygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+|..== +..+..++....+.|++||.|.+..
T Consensus 138 ~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 138 FIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 986542 2224567888889999999999853
No 264
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.29 E-value=0.0048 Score=58.50 Aligned_cols=54 Identities=15% Similarity=0.125 Sum_probs=40.9
Q ss_pred cEEEE-eccHHHHHHHhhhcCCcccEEEeCC-CCCC--------------HHHHHHHHHhcccCCEEEEEec
Q 019408 49 RWVVT-HFDANRVLSECYLKREFFDLIDIDS-FGSD--------------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 49 ~~~v~-~~DA~~~l~~~~~~~~~fDvIdlDP-ygsp--------------~~fld~al~~v~~gGlL~vt~T 104 (341)
...++ ++|+.++|..+ ..+.||+|++|| |+.. .+.+..+.+.|+++|.|++...
T Consensus 38 ~~~l~i~gD~l~~L~~l--~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKL--PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEEECCHHHHHHTS--CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEECCcHHHHHHhC--ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 46688 99999999765 345899999999 8753 1233455678999999999554
No 265
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.25 E-value=0.004 Score=63.15 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=68.3
Q ss_pred CccccHhHHHHhhh---CC----------CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc
Q 019408 1 MCGCGIRSLRYLAE---AK----------ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK 67 (341)
Q Consensus 1 fagsG~rgir~a~e---~g----------a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~ 67 (341)
.||||.+=+.+... .+ -..++.+|+++.++.+++.|+-+.+++ ...+.++|....-......
T Consensus 225 acGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-----~~~I~~~dtL~~~~~~~~~ 299 (530)
T 3ufb_A 225 ACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-----YPRIDPENSLRFPLREMGD 299 (530)
T ss_dssp TCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-----CCEEECSCTTCSCGGGCCG
T ss_pred CCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-----cccccccccccCchhhhcc
Confidence 38999997766432 11 135899999999999999999998874 3456788875421111122
Q ss_pred CCcccEEEeCC-CCCC-------------------HHHHHHHHHhcc-------cCCEEEEEe
Q 019408 68 REFFDLIDIDS-FGSD-------------------SSFLRTVFNAVK-------RDGLLYLTS 103 (341)
Q Consensus 68 ~~~fDvIdlDP-ygsp-------------------~~fld~al~~v~-------~gGlL~vt~ 103 (341)
..+||+|+..| ||.. ..|+...++.|+ +||.+++--
T Consensus 300 ~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 300 KDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp GGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 35799999999 8741 136677777776 689988643
No 266
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=96.23 E-value=0.0032 Score=58.52 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=62.2
Q ss_pred ccccH----hHHHHhhhCC----CCEEEEeeCCHHHHHHHHHHHHH----cCCC-------------CCCC---------
Q 019408 2 CGCGI----RSLRYLAEAK----ADFVMANDGNDAHRRVILGNLKS----IERG-------------SGDE--------- 47 (341)
Q Consensus 2 agsG~----rgir~a~e~g----a~~V~~~Dis~~A~~~i~~N~~~----n~~~-------------~~~~--------- 47 (341)
||||- .++-.+...+ --+|++.|+|+.+++.+++|+-. .++. ..++
T Consensus 114 CgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr 193 (274)
T 1af7_A 114 ASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELA 193 (274)
T ss_dssp CTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHH
T ss_pred ccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhc
Confidence 68897 5665554322 13799999999999999998620 0000 0000
Q ss_pred ccEEEEeccHHHHHHHhhhcCCcccEEEeCC---CCC-C--HHHHHHHHHhcccCCEEEEEecCC
Q 019408 48 KRWVVTHFDANRVLSECYLKREFFDLIDIDS---FGS-D--SSFLRTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 48 ~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP---ygs-p--~~fld~al~~v~~gGlL~vt~TD~ 106 (341)
..+++.+.|..+. .......||+|+.== |-. + ...+....+.|++||+|.+..+++
T Consensus 194 ~~V~F~~~dl~~~---~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 194 NYVEFSSVNLLEK---QYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSEN 255 (274)
T ss_dssp TTEEEEECCTTCS---SCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCC
T ss_pred ccCeEEecccCCC---CCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 1467777886541 001124799998632 222 2 244566678999999999865544
No 267
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=96.18 E-value=0.0011 Score=60.96 Aligned_cols=100 Identities=14% Similarity=0.029 Sum_probs=60.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHc-----------------CCCCC--------CCccEEEEecc
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSI-----------------ERGSG--------DEKRWVVTHFD 56 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n-----------------~~~~~--------~~~~~~v~~~D 56 (341)
||+|...+..+. .+..+|+++|+|+.+++.++++++.. +.... ....+++.+.|
T Consensus 80 cG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D 158 (289)
T 2g72_A 80 SGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPID 158 (289)
T ss_dssp CTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCC
T ss_pred CCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecc
Confidence 688985554444 34458999999999999999876421 10000 00013466667
Q ss_pred HHHHHHH--hhhcCCcccEEEeCC-CC-------CCHHHHHHHHHhcccCCEEEEE
Q 019408 57 ANRVLSE--CYLKREFFDLIDIDS-FG-------SDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 57 A~~~l~~--~~~~~~~fDvIdlDP-yg-------sp~~fld~al~~v~~gGlL~vt 102 (341)
+...+.- .......||+|+.-- +- .+..++..+.+.|++||.|+++
T Consensus 159 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 159 VHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp TTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7542210 001124599997653 11 1234566777899999999985
No 268
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.14 E-value=0.0028 Score=59.26 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--CCCCHHHHHHHHHhcccCCEEEE
Q 019408 29 HRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--FGSDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 29 A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--ygsp~~fld~al~~v~~gGlL~v 101 (341)
.++.+++|++..++. .++++++.+|+.+.|... ...+||+|+||- |.+-..+++.....|++||+|.+
T Consensus 173 ~~~~ar~n~~~~gl~---~~~I~li~Gda~etL~~~--~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLL---DEQVRFLPGWFKDTLPTA--PIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp CHHHHHHHHHHTTCC---STTEEEEESCHHHHSTTC--CCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCC---cCceEEEEeCHHHHHhhC--CCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 367789999998872 257999999999988754 245899999997 43223678888999999999986
No 269
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.05 E-value=0.007 Score=57.28 Aligned_cols=57 Identities=19% Similarity=0.184 Sum_probs=42.8
Q ss_pred ccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CCCC-----------------HHHHHHHHHhcccCCEEEEEecCC
Q 019408 48 KRWVVTHFDANRVLSECYLKREFFDLIDIDS-FGSD-----------------SSFLRTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 48 ~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygsp-----------------~~fld~al~~v~~gGlL~vt~TD~ 106 (341)
....++++|+.++|..+ ..+.||+|++|| |+.. .+.+..+.+.|++||.|++...|.
T Consensus 13 ~~~~ii~gD~~~~l~~l--~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF--PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSEEEEESCHHHHGGGS--CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCceEEeCcHHHHHhhC--CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 35678999999988754 346899999999 8654 123445668899999999966543
No 270
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.79 E-value=0.0054 Score=56.30 Aligned_cols=79 Identities=13% Similarity=0.097 Sum_probs=57.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH-HHHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV-LSECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~-l~~~~~~~~~fDvIdlDP-y 79 (341)
+|+|..+...+. .+ .+|+++|+|++.++.+++|++. . .+++++++|+.++ +... ..+..|| |+-+| |
T Consensus 38 ~G~G~lt~~La~-~~-~~V~avEid~~~~~~~~~~~~~--~-----~~v~~i~~D~~~~~~~~~-~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 38 PGRGALTDYLLT-EC-DNLALVEIDRDLVAFLQKKYNQ--Q-----KNITIYQNDALQFDFSSV-KTDKPLR-VVGNLPY 106 (255)
T ss_dssp CTTTTTHHHHTT-TS-SEEEEEECCHHHHHHHHHHHTT--C-----TTEEEEESCTTTCCGGGS-CCSSCEE-EEEECCH
T ss_pred ccccHHHHHHHH-hC-CEEEEEECCHHHHHHHHHHHhh--C-----CCcEEEEcchHhCCHHHh-ccCCCeE-EEecCCc
Confidence 799999999987 45 6899999999999999999874 2 3678999999876 2221 1134688 55565 5
Q ss_pred CCCHHHHHHHHH
Q 019408 80 GSDSSFLRTVFN 91 (341)
Q Consensus 80 gsp~~fld~al~ 91 (341)
.-.++.+...+.
T Consensus 107 ~is~~il~~ll~ 118 (255)
T 3tqs_A 107 NISTPLLFHLFS 118 (255)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccCHHHHHHHHh
Confidence 434455555443
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.71 E-value=0.014 Score=53.28 Aligned_cols=77 Identities=10% Similarity=0.013 Sum_probs=57.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHH-HHhhhcCCcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVL-SECYLKREFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l-~~~~~~~~~fDvIdlDP-y 79 (341)
+|+|..+...+. .|+.+|+++|+|+.+++.+++| . . .+++++++|+.++- ... ...| .|+.+| |
T Consensus 40 ~G~G~lt~~L~~-~~~~~v~avEid~~~~~~~~~~-~---~-----~~v~~i~~D~~~~~~~~~---~~~~-~vv~NlPy 105 (249)
T 3ftd_A 40 GGTGNLTKVLLQ-HPLKKLYVIELDREMVENLKSI-G---D-----ERLEVINEDASKFPFCSL---GKEL-KVVGNLPY 105 (249)
T ss_dssp SCHHHHHHHHTT-SCCSEEEEECCCHHHHHHHTTS-C---C-----TTEEEECSCTTTCCGGGS---CSSE-EEEEECCT
T ss_pred CchHHHHHHHHH-cCCCeEEEEECCHHHHHHHHhc-c---C-----CCeEEEEcchhhCChhHc---cCCc-EEEEECch
Confidence 799999999987 5778999999999999999998 2 1 36789999997652 111 1133 677776 7
Q ss_pred CCCHHHHHHHHHh
Q 019408 80 GSDSSFLRTVFNA 92 (341)
Q Consensus 80 gsp~~fld~al~~ 92 (341)
.-.++.+...+..
T Consensus 106 ~i~~~il~~ll~~ 118 (249)
T 3ftd_A 106 NVASLIIENTVYN 118 (249)
T ss_dssp TTHHHHHHHHHHT
T ss_pred hccHHHHHHHHhc
Confidence 6666777666553
No 272
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.71 E-value=0.0093 Score=56.00 Aligned_cols=67 Identities=15% Similarity=0.013 Sum_probs=49.4
Q ss_pred CccccHhHHHHhhhCCCCE--EEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKADF--VMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~--V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
|||.|.+++-+.+ +|.+. |+++|+++.|+++.+.|.. ...++++|+.++..+.......+|+|...|
T Consensus 23 FaG~GG~~~g~~~-aG~~~~~v~a~E~d~~a~~ty~~N~~----------~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 23 FDGIATGLLVLKD-LGIQVDRYIASEVCEDSITVGMVRHQ----------GKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp TCTTTHHHHHHHH-TTBCEEEEEEECCCHHHHHHHHHHTT----------TCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred CcCccHHHHHHHH-CCCccceEEEEECCHHHHHHHHHhCC----------CCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 8999998887766 78877 7999999999999999863 113556777665433221123689999998
No 273
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.58 E-value=0.01 Score=53.72 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=56.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
+|+|..++..+. .+ .+|+++|+|+.+++.+++|++.. .+++++++|+.++-. ..+..| .|+.+| |.
T Consensus 39 ~G~G~lt~~l~~-~~-~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~D~~~~~~---~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 39 SGKGHFTLELVQ-RC-NFVTAIEIDHKLCKTTENKLVDH-------DNFQVLNKDILQFKF---PKNQSY-KIFGNIPYN 105 (244)
T ss_dssp CTTSHHHHHHHH-HS-SEEEEECSCHHHHHHHHHHTTTC-------CSEEEECCCGGGCCC---CSSCCC-EEEEECCGG
T ss_pred CCchHHHHHHHH-cC-CeEEEEECCHHHHHHHHHhhccC-------CCeEEEEChHHhCCc---ccCCCe-EEEEeCCcc
Confidence 799999999987 45 68999999999999999998632 367899999976421 112345 466665 76
Q ss_pred CCHHHHHHHHHh
Q 019408 81 SDSSFLRTVFNA 92 (341)
Q Consensus 81 sp~~fld~al~~ 92 (341)
..++.+...+..
T Consensus 106 ~~~~~l~~~l~~ 117 (244)
T 1qam_A 106 ISTDIIRKIVFD 117 (244)
T ss_dssp GHHHHHHHHHHS
T ss_pred cCHHHHHHHHhc
Confidence 555665555543
No 274
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=95.54 E-value=0.005 Score=60.54 Aligned_cols=86 Identities=20% Similarity=0.128 Sum_probs=59.0
Q ss_pred ccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH--HHHhhhcCCcccEEEeCCCC
Q 019408 4 CGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV--LSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 4 sG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~--l~~~~~~~~~fDvIdlDPyg 80 (341)
+|..+++++++. ...+|+.+|+|+... .. . .+++++++|+.++ +.........||+|+.|=.-
T Consensus 233 TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~-~-----~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH 298 (419)
T 3sso_A 233 WGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD-E-----LRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGSH 298 (419)
T ss_dssp CCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC-B-----TTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSCC
T ss_pred CCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc-C-----CCcEEEEecccccchhhhhhcccCCccEEEECCcc
Confidence 678899998862 235899999999852 11 1 4688999998764 32222213579999987411
Q ss_pred C---CHHHHHHHHHhcccCCEEEEEe
Q 019408 81 S---DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 81 s---p~~fld~al~~v~~gGlL~vt~ 103 (341)
. ...++..+.+.||+||++++.-
T Consensus 299 ~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 299 INAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1 2345677889999999999853
No 275
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.43 E-value=0.016 Score=53.84 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=41.2
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CCCCH----------------HH-------H
Q 019408 31 RVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FGSDS----------------SF-------L 86 (341)
Q Consensus 31 ~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-ygsp~----------------~f-------l 86 (341)
.-+++|.+..+.- ....++++++|+.++|..+ ..+.||+|+.|| |.... .| +
T Consensus 5 ~~~~~~~~~gd~~--~~~~~~i~~gD~~~~l~~l--~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~ 80 (297)
T 2zig_A 5 PKAKEAFSEGEKV--SFGVHRLHVGDAREVLASF--PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVW 80 (297)
T ss_dssp ------------------CEEEEESCHHHHHTTS--CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHhhhCccccc--cccCCEEEECcHHHHHhhC--CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHH
Confidence 3455555543220 0135679999999988654 346899999999 75321 12 2
Q ss_pred HHHHHhcccCCEEEEEecCC
Q 019408 87 RTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 87 d~al~~v~~gGlL~vt~TD~ 106 (341)
..+.+.|++||.|++...|.
T Consensus 81 ~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 81 REVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp HHHHHHEEEEEEEEEEECCE
T ss_pred HHHHHHcCCCcEEEEEECCC
Confidence 36678899999999866543
No 276
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.42 E-value=0.011 Score=54.76 Aligned_cols=78 Identities=17% Similarity=0.060 Sum_probs=60.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
+|+|..+...+. .+ .+|+++|+|++.++.+++|+.. .+++++++|+.++-.. ....||.|+-.| |.
T Consensus 55 ~G~G~lt~~L~~-~~-~~V~avEid~~~~~~l~~~~~~--------~~v~vi~~D~l~~~~~---~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 55 PGLGALTRALLE-AG-AEVTAIEKDLRLRPVLEETLSG--------LPVRLVFQDALLYPWE---EVPQGSLLVANLPYH 121 (271)
T ss_dssp CTTSHHHHHHHH-TT-CCEEEEESCGGGHHHHHHHTTT--------SSEEEEESCGGGSCGG---GSCTTEEEEEEECSS
T ss_pred CchHHHHHHHHH-cC-CEEEEEECCHHHHHHHHHhcCC--------CCEEEEECChhhCChh---hccCccEEEecCccc
Confidence 799999999987 46 5799999999999999998862 3578999999765211 112588888886 87
Q ss_pred CCHHHHHHHHHh
Q 019408 81 SDSSFLRTVFNA 92 (341)
Q Consensus 81 sp~~fld~al~~ 92 (341)
-.++.+...+..
T Consensus 122 iss~il~~ll~~ 133 (271)
T 3fut_A 122 IATPLVTRLLKT 133 (271)
T ss_dssp CCHHHHHHHHHH
T ss_pred ccHHHHHHHhcC
Confidence 677887766654
No 277
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=95.42 E-value=0.00027 Score=63.92 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=54.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
||+|..++..+. .+ .+|+++|+|+.+++.+++|++. . .+++++++|+.++-. ..+..| .|+.+| |.
T Consensus 38 ~G~G~~~~~l~~-~~-~~v~~id~~~~~~~~a~~~~~~--~-----~~v~~~~~D~~~~~~---~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 38 TGKGHLTTKLAK-IS-KQVTSIELDSHLFNLSSEKLKL--N-----TRVTLIHQDILQFQF---PNKQRY-KIVGNIPYH 104 (245)
T ss_dssp CCCSSCSHHHHH-HS-SEEEESSSSCSSSSSSSCTTTT--C-----SEEEECCSCCTTTTC---CCSSEE-EEEEECCSS
T ss_pred CCCCHHHHHHHH-hC-CeEEEEECCHHHHHHHHHHhcc--C-----CceEEEECChhhcCc---ccCCCc-EEEEeCCcc
Confidence 799999999987 45 7899999999999999998862 2 468899999876421 112468 667776 76
Q ss_pred CCHHHHHH
Q 019408 81 SDSSFLRT 88 (341)
Q Consensus 81 sp~~fld~ 88 (341)
...+.+..
T Consensus 105 ~~~~~~~~ 112 (245)
T 1yub_A 105 LSTQIIKK 112 (245)
T ss_dssp SCHHHHHH
T ss_pred ccHHHHHH
Confidence 55555443
No 278
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.28 E-value=0.025 Score=53.50 Aligned_cols=89 Identities=10% Similarity=-0.045 Sum_probs=62.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|..++.+|+..|+.+|+++|.+++..+++++ .+.+ .-+.....|..+.+.+.. .+..+|+|+ |.-|.+
T Consensus 177 ~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~v~~~t-~g~g~D~v~-d~~g~~ 246 (352)
T 3fpc_A 177 PVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGAT----DIINYKNGDIVEQILKAT-DGKGVDKVV-IAGGDV 246 (352)
T ss_dssp HHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCC----EEECGGGSCHHHHHHHHT-TTCCEEEEE-ECSSCT
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCc----eEEcCCCcCHHHHHHHHc-CCCCCCEEE-ECCCCh
Confidence 457788888888899889999999998888765 4542 111111345555554432 345799885 776654
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|-+.+.
T Consensus 247 -~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 247 -HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp -THHHHHHHHEEEEEEEEEC
T ss_pred -HHHHHHHHHHhcCCEEEEe
Confidence 5678899999999999863
No 279
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.70 E-value=0.16 Score=48.05 Aligned_cols=87 Identities=14% Similarity=0.069 Sum_probs=58.5
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe----ccHHHHHHHhhhcCCcccEEEeCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH----FDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~----~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+.|...+.+|+..|+.+|+++|.+++-.+++++ .+.+ .+.-.. .|..+.+.+.. +..+|+|+ |.
T Consensus 182 ~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-----~vi~~~~~~~~~~~~~i~~~~--~~g~D~vi-d~ 249 (356)
T 1pl8_A 182 PIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD-----LVLQISKESPQEIARKVEGQL--GCKPEVTI-EC 249 (356)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS-----EEEECSSCCHHHHHHHHHHHH--TSCCSEEE-EC
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC-----EEEcCcccccchHHHHHHHHh--CCCCCEEE-EC
Confidence 457788888887899899999999998888764 5542 221111 22222333322 24699874 66
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEE
Q 019408 79 FGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 79 ygsp~~fld~al~~v~~gGlL~vt 102 (341)
-|.+ ..++.++++++++|.+.+.
T Consensus 250 ~g~~-~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 250 TGAE-ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp SCCH-HHHHHHHHHSCTTCEEEEC
T ss_pred CCCh-HHHHHHHHHhcCCCEEEEE
Confidence 5543 5678899999999998864
No 280
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.54 E-value=0.12 Score=48.83 Aligned_cols=90 Identities=12% Similarity=0.042 Sum_probs=62.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEE-----eccHHHHHHHhhhcCCcccEEEe
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVT-----HFDANRVLSECYLKREFFDLIDI 76 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~-----~~DA~~~l~~~~~~~~~fDvIdl 76 (341)
++.|..++.+|+..|++.|++.|.|++-.+++++- . . ..+... ..|..+.+.+. ..+..+|+|+
T Consensus 189 G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-~-------~~~~~~~~~~~~~~~~~~v~~~-t~g~g~Dvvi- 257 (363)
T 3m6i_A 189 GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-P-------EVVTHKVERLSAEESAKKIVES-FGGIEPAVAL- 257 (363)
T ss_dssp SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-T-------TCEEEECCSCCHHHHHHHHHHH-TSSCCCSEEE-
T ss_pred CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-h-------hcccccccccchHHHHHHHHHH-hCCCCCCEEE-
Confidence 35688889999988998899999999999998873 1 1 111111 13334444433 2355799864
Q ss_pred CCCCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 77 DSFGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 77 DPygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
|.-|.+ ..++.++++++++|.+.+..
T Consensus 258 d~~g~~-~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 258 ECTGVE-SSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp ECSCCH-HHHHHHHHHSCTTCEEEECC
T ss_pred ECCCCh-HHHHHHHHHhcCCCEEEEEc
Confidence 666653 47889999999999998743
No 281
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.53 E-value=0.07 Score=50.05 Aligned_cols=87 Identities=17% Similarity=0.082 Sum_probs=60.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
++.|...+.+|+..|+ +|++.|.|++-.+.+++ .+.+ ..+.....|..+.+.+. .+ .+|+|+. .-|.
T Consensus 176 G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~----~~i~~~~~~~~~~~~~~--~g-~~d~vid-~~g~ 242 (340)
T 3s2e_A 176 GGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE----VAVNARDTDPAAWLQKE--IG-GAHGVLV-TAVS 242 (340)
T ss_dssp STTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHH--HS-SEEEEEE-SSCC
T ss_pred CHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC----EEEeCCCcCHHHHHHHh--CC-CCCEEEE-eCCC
Confidence 3568888999998898 89999999999888765 5542 11111123555555442 23 6898754 4343
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+ ..++.++++++++|.+.+.
T Consensus 243 ~-~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 243 P-KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp H-HHHHHHHHHEEEEEEEEEC
T ss_pred H-HHHHHHHHHhccCCEEEEe
Confidence 3 6788999999999999864
No 282
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=94.36 E-value=0.0045 Score=57.46 Aligned_cols=86 Identities=10% Similarity=-0.001 Sum_probs=55.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEE--eccHHHHHHHhhhcCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVT--HFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~--~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
||+|..+..++. . .+|+++|+++. ...++++... ... +..++++ ++|+..+ ..+.||+|+.|.
T Consensus 91 cGtG~~s~~la~-~--~~V~gVD~s~m-~~~a~~~~~~~~~~----~~~v~~~~~~~D~~~l------~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 91 CGRGSWSYYAAS-Q--PNVREVKAYTL-GTSGHEKPRLVETF----GWNLITFKSKVDVTKM------EPFQADTVLCDI 156 (276)
T ss_dssp CTTCHHHHHHHT-S--TTEEEEEEECC-CCTTSCCCCCCCCT----TGGGEEEECSCCGGGC------CCCCCSEEEECC
T ss_pred cCCCHHHHHHHH-c--CCEEEEECchh-hhhhhhchhhhhhc----CCCeEEEeccCcHhhC------CCCCcCEEEECC
Confidence 799999998887 4 57999999983 1111111000 000 1146677 8898752 246899999996
Q ss_pred -CCCCHH---------HHHHHHHhcccCC--EEEE
Q 019408 79 -FGSDSS---------FLRTVFNAVKRDG--LLYL 101 (341)
Q Consensus 79 -ygsp~~---------fld~al~~v~~gG--lL~v 101 (341)
+.++.+ .++.+.+.|++|| .+++
T Consensus 157 ~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 157 GESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 222212 4556668899999 8776
No 283
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.32 E-value=0.14 Score=47.83 Aligned_cols=91 Identities=13% Similarity=0.091 Sum_probs=63.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|.|..++.+|+..|+..++++|.+++-.+++++ .|.+ ..+.....|..+...... .+..+|+ .+|.-|.
T Consensus 170 G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~----~~i~~~~~~~~~~~~~~~-~~~g~d~-v~d~~G~ 239 (346)
T 4a2c_A 170 GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM----QTFNSSEMSAPQMQSVLR-ELRFNQL-ILETAGV 239 (346)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHHG-GGCSSEE-EEECSCS
T ss_pred CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe----EEEeCCCCCHHHHHHhhc-ccCCccc-ccccccc
Confidence 4568888889988899999999999998888765 5652 222222345555554432 2344565 4676665
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ ..++.++++++++|.+.+..
T Consensus 240 ~-~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 240 P-QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp H-HHHHHHHHHCCTTCEEEECC
T ss_pred c-chhhhhhheecCCeEEEEEe
Confidence 4 67889999999999998743
No 284
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.26 E-value=0.11 Score=50.08 Aligned_cols=90 Identities=10% Similarity=0.059 Sum_probs=61.7
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|..++.+|+..|+.+|+++|.+++-.+++++ .|.+ .-+.....|..+.+.+.. .+..+|+|+ |.-|.+
T Consensus 224 ~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~i~~~t-~g~g~D~vi-d~~g~~ 293 (404)
T 3ip1_A 224 PIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGAD----HVIDPTKENFVEAVLDYT-NGLGAKLFL-EATGVP 293 (404)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS----EEECTTTSCHHHHHHHHT-TTCCCSEEE-ECSSCH
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC----EEEcCCCCCHHHHHHHHh-CCCCCCEEE-ECCCCc
Confidence 567788888888899899999999999888865 4542 111111245555555442 345799774 777765
Q ss_pred HHHHHHHHHhc----ccCCEEEEE
Q 019408 83 SSFLRTVFNAV----KRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v----~~gGlL~vt 102 (341)
...++.+++++ +++|-+.+.
T Consensus 294 ~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 294 QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred HHHHHHHHHHHHhccCCCcEEEEe
Confidence 44667777777 999998873
No 285
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.24 E-value=0.074 Score=50.59 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=59.8
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+.+|+++|.|++..+++++ .+.+ .-+.....|..+.+.+.. .+ .||+| +|.-|.+
T Consensus 201 ~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~~~~~~~-~g-g~D~v-id~~g~~ 269 (371)
T 1f8f_A 201 AVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGAT----HVINSKTQDPVAAIKEIT-DG-GVNFA-LESTGSP 269 (371)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHT-TS-CEEEE-EECSCCH
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCC----EEecCCccCHHHHHHHhc-CC-CCcEE-EECCCCH
Confidence 457778888887899889999999999888764 4542 111111234444444432 23 79977 4665543
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|.+.+.
T Consensus 270 -~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 270 -EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp -HHHHHHHHTEEEEEEEEEC
T ss_pred -HHHHHHHHHHhcCCEEEEe
Confidence 6788999999999998864
No 286
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.19 E-value=0.087 Score=50.42 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=59.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEE-----eccHHHHHHHhhhcCCcccEEEe
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVT-----HFDANRVLSECYLKREFFDLIDI 76 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~-----~~DA~~~l~~~~~~~~~fDvIdl 76 (341)
++.|...+.+|+..|+.+|++.|.|++..+.+++ .+.+ .+ +. ..|..+.+.+.. .+..+|+| +
T Consensus 205 G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~-----~v-i~~~~~~~~~~~~~v~~~~-~g~g~Dvv-i 272 (380)
T 1vj0_A 205 GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD-----LT-LNRRETSVEERRKAIMDIT-HGRGADFI-L 272 (380)
T ss_dssp SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS-----EE-EETTTSCHHHHHHHHHHHT-TTSCEEEE-E
T ss_pred CHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc-----EE-EeccccCcchHHHHHHHHh-CCCCCcEE-E
Confidence 3567788888887887789999999998888764 5542 22 21 123333343332 23469987 4
Q ss_pred CCCCCCHHHHHHHHHhcccCCEEEEE
Q 019408 77 DSFGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 77 DPygsp~~fld~al~~v~~gGlL~vt 102 (341)
|.-|.+ ..++.++++++++|.+.+.
T Consensus 273 d~~g~~-~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 273 EATGDS-RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp ECSSCT-THHHHHHHHEEEEEEEEEC
T ss_pred ECCCCH-HHHHHHHHHHhcCCEEEEE
Confidence 665543 5678899999999998864
No 287
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.16 E-value=0.11 Score=49.87 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=59.7
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEecc-HHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFD-ANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~D-A~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+.|..++.+|+..|+.+|+++|.+++-.+++++ .|. +.+.....| ..+.+.+. ..+..+|+| +|.-|.
T Consensus 196 ~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa-----~~i~~~~~~~~~~~v~~~-t~g~g~Dvv-id~~G~ 264 (398)
T 1kol_A 196 PVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF-----EIADLSLDTPLHEQIAAL-LGEPEVDCA-VDAVGF 264 (398)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC-----EEEETTSSSCHHHHHHHH-HSSSCEEEE-EECCCT
T ss_pred HHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC-----cEEccCCcchHHHHHHHH-hCCCCCCEE-EECCCC
Confidence 567888899988899899999999999888865 454 211111122 33334333 223468987 466554
Q ss_pred C--------------HHHHHHHHHhcccCCEEEEE
Q 019408 82 D--------------SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p--------------~~fld~al~~v~~gGlL~vt 102 (341)
+ .+.++.++++++++|-+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 3 14788999999999998763
No 288
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.13 E-value=0.081 Score=49.87 Aligned_cols=86 Identities=12% Similarity=0.100 Sum_probs=58.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+ +|++.|.+++..+.+++ .+.+ .+.-...|..+.+.+. .+..+|+| +|.-|.+
T Consensus 162 ~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~vi~~~~~~~~~~~~~--~~~g~Dvv-~d~~g~~ 228 (346)
T 3fbg_A 162 GVGSIATQIAKAYGL-RVITTASRNETIEWTKK----MGAD-----IVLNHKESLLNQFKTQ--GIELVDYV-FCTFNTD 228 (346)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHH----HTCS-----EEECTTSCHHHHHHHH--TCCCEEEE-EESSCHH
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCc-----EEEECCccHHHHHHHh--CCCCccEE-EECCCch
Confidence 456666777777888 89999999999888876 4542 2211233444445443 34579966 4665542
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|-++..
T Consensus 229 -~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 229 -MYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp -HHHHHHHHHEEEEEEEEES
T ss_pred -HHHHHHHHHhccCCEEEEE
Confidence 5678999999999999753
No 289
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.10 E-value=0.026 Score=53.83 Aligned_cols=66 Identities=15% Similarity=0.104 Sum_probs=46.8
Q ss_pred CccccHhHHHHhhhCCC--CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKA--DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga--~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
|||.|.+++-+.. +|. +.|+++|+++.|+++.+.|.... .++++|..++..+... ...+|+|...|
T Consensus 10 FaG~GG~~~G~~~-aG~~~~~v~a~e~d~~a~~ty~~N~~~~----------~~~~~DI~~~~~~~~~-~~~~D~l~ggp 77 (333)
T 4h0n_A 10 YSGIGGMHCAWKE-SGLDGEIVAAVDINTVANSVYKHNFPET----------NLLNRNIQQLTPQVIK-KWNVDTILMSP 77 (333)
T ss_dssp TCTTTHHHHHHHH-HTCSEEEEEEECCCHHHHHHHHHHCTTS----------CEECCCGGGCCHHHHH-HTTCCEEEECC
T ss_pred CcCccHHHHHHHH-cCCCceEEEEEeCCHHHHHHHHHhCCCC----------ceeccccccCCHHHhc-cCCCCEEEecC
Confidence 7999998877755 576 67899999999999999997521 2345565544322111 12589999998
No 290
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.01 E-value=0.066 Score=51.13 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=62.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhh-hcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECY-LKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~-~~~~~fDvIdlDPyg 80 (341)
++.|..++.+|+..|+.+|+++|.+++..+++++ .|.+ ..+.....|..+.+.+.. ..+..+|+| +|.-|
T Consensus 192 G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~~i~~~~~~~~gg~Dvv-id~~G 262 (370)
T 4ej6_A 192 GVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT----ATVDPSAGDVVEAIAGPVGLVPGGVDVV-IECAG 262 (370)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS----EEECTTSSCHHHHHHSTTSSSTTCEEEE-EECSC
T ss_pred CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC----EEECCCCcCHHHHHHhhhhccCCCCCEE-EECCC
Confidence 3568888899988899899999999999888766 5552 111112345555554310 112379986 46656
Q ss_pred CCHHHHHHHHHhcccCCEEEEE
Q 019408 81 SDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~vt 102 (341)
.+ ..++.+++++++||.+.+.
T Consensus 263 ~~-~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 263 VA-ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp CH-HHHHHHHHHEEEEEEEEEC
T ss_pred CH-HHHHHHHHHhccCCEEEEE
Confidence 43 6788999999999999874
No 291
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.96 E-value=0.02 Score=54.09 Aligned_cols=89 Identities=18% Similarity=0.135 Sum_probs=60.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
+|+|..++..+......+++.+|+ +..+. +++++..+.. +++++..+|+++- .+ .||+|++--
T Consensus 193 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~----~~v~~~~~d~~~~------~p-~~D~v~~~~vlh 258 (348)
T 3lst_A 193 GGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVA----GRWKVVEGDFLRE------VP-HADVHVLKRILH 258 (348)
T ss_dssp CTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGT----TSEEEEECCTTTC------CC-CCSEEEEESCGG
T ss_pred CccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCC----CCeEEEecCCCCC------CC-CCcEEEEehhcc
Confidence 699999999988633357899999 44444 4444433432 4688999998621 13 799997743
Q ss_pred -CCCC--HHHHHHHHHhcccCCEEEEEec
Q 019408 79 -FGSD--SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 79 -ygsp--~~fld~al~~v~~gGlL~vt~T 104 (341)
+..+ ..++..+.++|++||.|.+...
T Consensus 259 ~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 259 NWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp GSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 1112 3567788899999999998543
No 292
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=93.94 E-value=0.0048 Score=56.86 Aligned_cols=86 Identities=16% Similarity=-0.023 Sum_probs=54.7
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEE--eccHHHHHHHhhhcCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVT--HFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~--~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
||+|..+..++. . .+|+++|+++.+ ..++++... ... +..++++ ++|+..+ ..+.||+|+.|-
T Consensus 83 cGtG~~s~~la~-~--~~V~gvD~s~m~-~~a~~~~~~~~~~----~~~v~~~~~~~D~~~l------~~~~fD~V~sd~ 148 (265)
T 2oxt_A 83 CGRGGWSYYAAS-R--PHVMDVRAYTLG-VGGHEVPRITESY----GWNIVKFKSRVDIHTL------PVERTDVIMCDV 148 (265)
T ss_dssp CTTSHHHHHHHT-S--TTEEEEEEECCC-CSSCCCCCCCCBT----TGGGEEEECSCCTTTS------CCCCCSEEEECC
T ss_pred cCCCHHHHHHHH-c--CcEEEEECchhh-hhhhhhhhhhhcc----CCCeEEEecccCHhHC------CCCCCcEEEEeC
Confidence 799999988877 4 579999999831 111111000 000 0145677 8898752 246899999995
Q ss_pred -CCCCHH---------HHHHHHHhcccCC--EEEE
Q 019408 79 -FGSDSS---------FLRTVFNAVKRDG--LLYL 101 (341)
Q Consensus 79 -ygsp~~---------fld~al~~v~~gG--lL~v 101 (341)
+.++.+ .++.+.+.|++|| .+++
T Consensus 149 ~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 149 GESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 222222 4556668899999 8876
No 293
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.83 E-value=0.074 Score=50.78 Aligned_cols=88 Identities=13% Similarity=0.141 Sum_probs=61.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEE---eccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVT---HFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~---~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+.|..++.+|+..|+.+|+++|.+++-.+++++ .+.+ .+.-. ..|..+.+.+.. .+ .+|+| +|.-
T Consensus 204 ~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-----~vi~~~~~~~~~~~~i~~~~-~g-g~D~v-id~~ 271 (378)
T 3uko_A 204 TVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN-----EFVNPKDHDKPIQEVIVDLT-DG-GVDYS-FECI 271 (378)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC-----EEECGGGCSSCHHHHHHHHT-TS-CBSEE-EECS
T ss_pred HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc-----EEEccccCchhHHHHHHHhc-CC-CCCEE-EECC
Confidence 467888888887899889999999998887654 5552 21111 234555555542 23 79987 4776
Q ss_pred CCCHHHHHHHHHhcccC-CEEEEEe
Q 019408 80 GSDSSFLRTVFNAVKRD-GLLYLTS 103 (341)
Q Consensus 80 gsp~~fld~al~~v~~g-GlL~vt~ 103 (341)
|.+ ..++.+++++++| |.+.+..
T Consensus 272 g~~-~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 272 GNV-SVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CCH-HHHHHHHHTBCTTTCEEEECS
T ss_pred CCH-HHHHHHHHHhhccCCEEEEEc
Confidence 654 6788999999996 9888643
No 294
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=93.80 E-value=0.02 Score=53.56 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=48.7
Q ss_pred cccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEE-EeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 3 GCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVV-THFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 3 gsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v-~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
|+|. ..++...+ ..+|+++|+|+. + .+ +++ +++|+.++- ....||+|+.|++-
T Consensus 79 GpGs--~~~a~~~~~~~~V~gvDis~~----v------~~--------v~~~i~gD~~~~~-----~~~~fD~Vvsn~~~ 133 (290)
T 2xyq_A 79 APGT--AVLRQWLPTGTLLVDSDLNDF----V------SD--------ADSTLIGDCATVH-----TANKWDLIISDMYD 133 (290)
T ss_dssp CHHH--HHHHHHSCTTCEEEEEESSCC----B------CS--------SSEEEESCGGGCC-----CSSCEEEEEECCCC
T ss_pred CcHH--HHHHHHcCCCCEEEEEECCCC----C------CC--------CEEEEECccccCC-----ccCcccEEEEcCCc
Confidence 3366 22333234 368999999998 1 12 346 899986431 12479999999742
Q ss_pred CC---------------HHHHHHHHHhcccCCEEEEE
Q 019408 81 SD---------------SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp---------------~~fld~al~~v~~gGlL~vt 102 (341)
.. ...+..+.+.|++||.+++.
T Consensus 134 ~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 134 PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp CC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 11 13566778899999999984
No 295
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.80 E-value=0.17 Score=47.53 Aligned_cols=88 Identities=20% Similarity=0.179 Sum_probs=61.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|..++.+|+..|+.+|+++|.+++-.+++++ .+.+ .+.-...|..+.+.+.. .+..+|+| +|.-|.+
T Consensus 182 ~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~-----~~i~~~~~~~~~v~~~t-~g~g~d~v-~d~~G~~ 250 (345)
T 3jv7_A 182 GLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD-----AAVKSGAGAADAIRELT-GGQGATAV-FDFVGAQ 250 (345)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS-----EEEECSTTHHHHHHHHH-GGGCEEEE-EESSCCH
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC-----EEEcCCCcHHHHHHHHh-CCCCCeEE-EECCCCH
Confidence 457788888887677889999999999888765 5652 22222334444444432 34578965 5666653
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|-+.+.
T Consensus 251 -~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 251 -STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp -HHHHHHHHHEEEEEEEEEC
T ss_pred -HHHHHHHHHHhcCCEEEEE
Confidence 4789999999999999874
No 296
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=93.76 E-value=0.031 Score=48.40 Aligned_cols=73 Identities=23% Similarity=0.186 Sum_probs=51.2
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
||+|..+..++ .+|+++|+|+. ++ ++.++|+.++ ......||+|+... +
T Consensus 76 ~G~G~~~~~l~-----~~v~~~D~s~~------------~~--------~~~~~d~~~~----~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 76 CGDCRLASSIR-----NPVHCFDLASL------------DP--------RVTVCDMAQV----PLEDESVDVAVFCLSLM 126 (215)
T ss_dssp CTTCHHHHHCC-----SCEEEEESSCS------------ST--------TEEESCTTSC----SCCTTCEEEEEEESCCC
T ss_pred CcCCHHHHHhh-----ccEEEEeCCCC------------Cc--------eEEEeccccC----CCCCCCEeEEEEehhcc
Confidence 68888876653 46999999988 22 1356666542 12245799998765 2
Q ss_pred -CCCHHHHHHHHHhcccCCEEEEEe
Q 019408 80 -GSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 80 -gsp~~fld~al~~v~~gGlL~vt~ 103 (341)
..+..++..+.+.|++||.|.++.
T Consensus 127 ~~~~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 127 GTNIRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHhCCCCeEEEEEE
Confidence 234577888899999999999854
No 297
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=93.72 E-value=0.043 Score=50.07 Aligned_cols=79 Identities=8% Similarity=-0.057 Sum_probs=54.4
Q ss_pred ccccHhHHHHhhhCCCCE--EEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH-HHHhhhcCCcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAKADF--VMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV-LSECYLKREFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~--V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~-l~~~~~~~~~fDvIdlDP 78 (341)
+|+|..+. . . .+ .+ |+++|+|+..++.+++|++.+ .+++++++|+.++ +......+...|+|+-.|
T Consensus 30 ~G~G~lt~-l-~-~~-~~~~v~avEid~~~~~~a~~~~~~~-------~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 30 PGLAALTE-P-V-GE-RLDQLTVIELDRDLAARLQTHPFLG-------PKLTIYQQDAMTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp CTTTTTHH-H-H-HT-TCSCEEEECCCHHHHHHHHTCTTTG-------GGEEEECSCGGGCCHHHHHHHHTSCEEEEEEC
T ss_pred CCCcHHHH-h-h-hC-CCCeEEEEECCHHHHHHHHHHhccC-------CceEEEECchhhCCHHHhhcccCCceEEEECC
Confidence 69999999 4 3 24 45 999999999999999987642 3678999999874 322210011346777776
Q ss_pred -CCCCHHHHHHHHH
Q 019408 79 -FGSDSSFLRTVFN 91 (341)
Q Consensus 79 -ygsp~~fld~al~ 91 (341)
|.-+++.+...+.
T Consensus 99 PY~i~~~il~~ll~ 112 (252)
T 1qyr_A 99 PYNISTPLMFHLFS 112 (252)
T ss_dssp CTTTHHHHHHHHHT
T ss_pred CCCccHHHHHHHHh
Confidence 8766777655443
No 298
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.67 E-value=0.25 Score=46.54 Aligned_cols=88 Identities=15% Similarity=0.097 Sum_probs=58.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe--ccHHHHHHHhhh--cCCcccEEEeCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH--FDANRVLSECYL--KREFFDLIDIDS 78 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~--~DA~~~l~~~~~--~~~~fDvIdlDP 78 (341)
|.|...+.+|+..|++ |++.|.|++..+++++ .+.+ .+.-.. .|..+-+.+... .+..+|+|+ |.
T Consensus 179 ~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~----lGa~-----~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi-d~ 247 (352)
T 1e3j_A 179 PIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKN----CGAD-----VTLVVDPAKEEESSIIERIRSAIGDLPNVTI-DC 247 (352)
T ss_dssp HHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHH----TTCS-----EEEECCTTTSCHHHHHHHHHHHSSSCCSEEE-EC
T ss_pred HHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHH----hCCC-----EEEcCcccccHHHHHHHHhccccCCCCCEEE-EC
Confidence 5677888888878887 9999999998888764 4542 221112 233333333221 135699874 66
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEE
Q 019408 79 FGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 79 ygsp~~fld~al~~v~~gGlL~vt 102 (341)
-|.+ ..++.++++++++|-+.+.
T Consensus 248 ~g~~-~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 248 SGNE-KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SCCH-HHHHHHHHHSCTTCEEEEC
T ss_pred CCCH-HHHHHHHHHHhcCCEEEEE
Confidence 5542 4678899999999998864
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=93.49 E-value=0.11 Score=48.37 Aligned_cols=74 Identities=18% Similarity=0.009 Sum_probs=53.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC-CcccEEEeCC-C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR-EFFDLIDIDS-F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~-~~fDvIdlDP-y 79 (341)
.|.|.-+...+. .+ .+|+++|.|+.|++..++ ++. .+++++++|...+-..+...+ .++|.|.+|+ |
T Consensus 31 ~G~GGHS~~il~-~~-g~VigiD~Dp~Ai~~A~~-L~~--------~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 31 LGGAGHARGILE-RG-GRVIGLDQDPEAVARAKG-LHL--------PGLTVVQGNFRHLKRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp CTTSHHHHHHHH-TT-CEEEEEESCHHHHHHHHH-TCC--------TTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred CCCcHHHHHHHH-CC-CEEEEEeCCHHHHHHHHh-hcc--------CCEEEEECCcchHHHHHHHcCCCCcCEEEeCCcc
Confidence 588999988877 43 489999999999999887 642 267888888876633222212 4799999999 4
Q ss_pred CCCHHHHHH
Q 019408 80 GSDSSFLRT 88 (341)
Q Consensus 80 gsp~~fld~ 88 (341)
.| +.+|.
T Consensus 100 SS--~Qld~ 106 (285)
T 1wg8_A 100 SS--FHLDD 106 (285)
T ss_dssp CH--HHHHC
T ss_pred cc--ccccc
Confidence 44 56664
No 300
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.07 E-value=0.24 Score=47.06 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=60.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe----ccHHHHHHHhhhcCCcccEEEeCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH----FDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~----~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+.|...+.+|+..|+.+|++.|.|++-.+.+++ .+.+ .+ +.. .|..+.+.+... + .+|+| +|.
T Consensus 206 ~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-----~v-i~~~~~~~~~~~~v~~~~~-~-g~Dvv-id~ 272 (376)
T 1e3i_A 206 CVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT-----DC-LNPRELDKPVQDVITELTA-G-GVDYS-LDC 272 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS-----EE-ECGGGCSSCHHHHHHHHHT-S-CBSEE-EES
T ss_pred HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc-----EE-EccccccchHHHHHHHHhC-C-CccEE-EEC
Confidence 457788888888899899999999988887754 4542 21 211 244444544322 3 79987 477
Q ss_pred CCCCHHHHHHHHHhcccC-CEEEEEe
Q 019408 79 FGSDSSFLRTVFNAVKRD-GLLYLTS 103 (341)
Q Consensus 79 ygsp~~fld~al~~v~~g-GlL~vt~ 103 (341)
-|.+ +.++.++++++++ |.+.+..
T Consensus 273 ~G~~-~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 273 AGTA-QTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred CCCH-HHHHHHHHHhhcCCCEEEEEC
Confidence 6643 6788999999999 9888643
No 301
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.07 E-value=0.066 Score=50.84 Aligned_cols=65 Identities=12% Similarity=0.051 Sum_probs=44.7
Q ss_pred CccccHhHHHHhhhCCC--CEE-EEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC
Q 019408 1 MCGCGIRSLRYLAEAKA--DFV-MANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID 77 (341)
Q Consensus 1 fagsG~rgir~a~e~ga--~~V-~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD 77 (341)
|||.|.+++-+.. +|. +.| +++|+++.|+++.+.|.... ++++|..++..+... ...+|+|..-
T Consensus 17 FaG~GG~~~G~~~-aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-----------~~~~DI~~~~~~~i~-~~~~Dil~gg 83 (327)
T 3qv2_A 17 FSGIGGLRSSYER-SSININATFIPFDINEIANKIYSKNFKEE-----------VQVKNLDSISIKQIE-SLNCNTWFMS 83 (327)
T ss_dssp TCTTTHHHHHHHH-SSCCCCEEEEEECCCHHHHHHHHHHHCCC-----------CBCCCTTTCCHHHHH-HTCCCEEEEC
T ss_pred CCChhHHHHHHHH-cCCCceEEEEEEECCHHHHHHHHHHCCCC-----------cccCChhhcCHHHhc-cCCCCEEEec
Confidence 7999998877755 674 778 89999999999999998522 223343332211111 1268999999
Q ss_pred C
Q 019408 78 S 78 (341)
Q Consensus 78 P 78 (341)
|
T Consensus 84 p 84 (327)
T 3qv2_A 84 P 84 (327)
T ss_dssp C
T ss_pred C
Confidence 8
No 302
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.03 E-value=0.16 Score=47.95 Aligned_cols=87 Identities=17% Similarity=0.241 Sum_probs=58.9
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+++|+..|+ +|++.|.|++..+.+++ .+.+ ..+.....|..+.+.+.. +..+|+| +|.-|.
T Consensus 179 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~----~~~~~~~~~~~~~~~~~~--~~g~Dvv-id~~g~- 245 (353)
T 4dup_A 179 GIGTTAIQLARAFGA-EVYATAGSTGKCEACER----LGAK----RGINYRSEDFAAVIKAET--GQGVDII-LDMIGA- 245 (353)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHH--SSCEEEE-EESCCG-
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCC----EEEeCCchHHHHHHHHHh--CCCceEE-EECCCH-
Confidence 445666777777888 69999999998888875 4442 111112344555555443 5679976 466664
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.++++++++|-+.+..
T Consensus 246 -~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 246 -AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp -GGHHHHHHTEEEEEEEEECC
T ss_pred -HHHHHHHHHhccCCEEEEEE
Confidence 57788999999999988643
No 303
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.97 E-value=0.2 Score=47.65 Aligned_cols=86 Identities=17% Similarity=0.175 Sum_probs=59.7
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEE-e---ccHHHHHHHhhhcCCcccEEEeCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVT-H---FDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~-~---~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+.|...+.+|+..|+.+|++.|.|++..+.+++ .+.+ .+ +. . .|..+.+.+... + .+|+| +|.
T Consensus 203 ~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~-----~v-i~~~~~~~~~~~~~~~~~~-~-g~D~v-id~ 269 (374)
T 1cdo_A 203 AVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT-----DF-VNPNDHSEPISQVLSKMTN-G-GVDFS-LEC 269 (374)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC-----EE-ECGGGCSSCHHHHHHHHHT-S-CBSEE-EEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc-----eE-EeccccchhHHHHHHHHhC-C-CCCEE-EEC
Confidence 557788888888899899999999998888764 4542 21 11 1 234444544322 3 79986 466
Q ss_pred CCCCHHHHHHHHHhcccC-CEEEEE
Q 019408 79 FGSDSSFLRTVFNAVKRD-GLLYLT 102 (341)
Q Consensus 79 ygsp~~fld~al~~v~~g-GlL~vt 102 (341)
-|.+ +.++.++++++++ |-+.+.
T Consensus 270 ~g~~-~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 270 VGNV-GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SCCH-HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCH-HHHHHHHHHhhcCCcEEEEE
Confidence 5543 6788999999999 988863
No 304
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.96 E-value=0.11 Score=50.04 Aligned_cols=88 Identities=14% Similarity=0.157 Sum_probs=57.7
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH-HHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA-NRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA-~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+.|..++.+|+..|+.+|+++|.|++..+.+++ .+. +.+.....|. .+.+.+.. .+..||+| +|.-|.
T Consensus 196 ~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa-----~~i~~~~~~~~~~~~~~~~-~g~g~Dvv-id~~g~ 264 (398)
T 2dph_A 196 PVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF-----ETIDLRNSAPLRDQIDQIL-GKPEVDCG-VDAVGF 264 (398)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC-----EEEETTSSSCHHHHHHHHH-SSSCEEEE-EECSCT
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC-----cEEcCCCcchHHHHHHHHh-CCCCCCEE-EECCCC
Confidence 457788888887899899999999998887754 343 1111112232 33333332 23469987 466453
Q ss_pred C-------------HHHHHHHHHhcccCCEEEE
Q 019408 82 D-------------SSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 82 p-------------~~fld~al~~v~~gGlL~v 101 (341)
+ ...++.++++++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 265 EAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp TCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred ccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 2 2468899999999998875
No 305
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.96 E-value=0.12 Score=48.60 Aligned_cols=88 Identities=14% Similarity=0.089 Sum_probs=58.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+.+|+..|+ +|++.|.+++-.+.+++ .+.+ .-+.....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 176 ~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~----~~~~~~~~~~~~~v~~~~-~~~g~D~v-id~~g~- 243 (349)
T 3pi7_A 176 QLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKD----IGAA----HVLNEKAPDFEATLREVM-KAEQPRIF-LDAVTG- 243 (349)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHH----HTCS----EEEETTSTTHHHHHHHHH-HHHCCCEE-EESSCH-
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC----EEEECCcHHHHHHHHHHh-cCCCCcEE-EECCCC-
Confidence 445666777777798 79999999988888764 4542 111111244444444432 23469976 577664
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+..++++++++|-+.+..
T Consensus 244 -~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 244 -PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp -HHHHHHHHHSCTTCEEEECC
T ss_pred -hhHHHHHhhhcCCCEEEEEe
Confidence 55688999999999998743
No 306
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.93 E-value=0.081 Score=52.94 Aligned_cols=70 Identities=11% Similarity=-0.037 Sum_probs=50.1
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHH-------------hhhc
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSE-------------CYLK 67 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~-------------~~~~ 67 (341)
|||.|.+++-+-. .|.+.|+++|+++.|+++.+.|..... ...++++|+.++... ....
T Consensus 95 FaG~GGlslG~~~-aG~~~v~avE~d~~A~~ty~~N~~~~p-------~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~ 166 (482)
T 3me5_A 95 FAGIGGIRRGFES-IGGQCVFTSEWNKHAVRTYKANHYCDP-------ATHHFNEDIRDITLSHQEGVSDEAAAEHIRQH 166 (482)
T ss_dssp SCTTSHHHHHHHT-TTEEEEEEECCCHHHHHHHHHHSCCCT-------TTCEEESCTHHHHCTTCTTSCHHHHHHHHHHH
T ss_pred cCCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhcccCC-------CcceeccchhhhhhccccccchhhHHhhhhhc
Confidence 8999988777655 788889999999999999999873211 123567888877511 1111
Q ss_pred CCcccEEEeCC
Q 019408 68 REFFDLIDIDS 78 (341)
Q Consensus 68 ~~~fDvIdlDP 78 (341)
...+|+|.--|
T Consensus 167 ~~~~Dvl~gGp 177 (482)
T 3me5_A 167 IPEHDVLLAGF 177 (482)
T ss_dssp SCCCSEEEEEC
T ss_pred CCCCCEEEecC
Confidence 23589999888
No 307
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.90 E-value=0.22 Score=47.35 Aligned_cols=87 Identities=8% Similarity=0.070 Sum_probs=58.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..+..+|++.|.+++-.+++++ .+.+ .+.-...|..+.+.+. .+..+|+| +|.-|.+
T Consensus 183 ~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad-----~vi~~~~~~~~~v~~~--~~~g~Dvv-id~~g~~ 250 (363)
T 4dvj_A 183 GVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH-----HVIDHSKPLAAEVAAL--GLGAPAFV-FSTTHTD 250 (363)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS-----EEECTTSCHHHHHHTT--CSCCEEEE-EECSCHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC-----EEEeCCCCHHHHHHHh--cCCCceEE-EECCCch
Confidence 456677788875355589999999998888765 5542 2211223444444443 34578965 5665542
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|-+++.
T Consensus 251 -~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 251 -KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -HHHHHHHHHSCTTCEEEEC
T ss_pred -hhHHHHHHHhcCCCEEEEE
Confidence 5778999999999999874
No 308
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.88 E-value=0.25 Score=46.94 Aligned_cols=87 Identities=10% Similarity=0.046 Sum_probs=59.8
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe---ccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH---FDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~---~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+.|...+.+|+..|+.+|++.|.|++..+++++ .+.+ .+.-.. .|..+.+.+... + .+|+|+ |.-
T Consensus 202 ~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-----~vi~~~~~~~~~~~~i~~~t~-g-g~Dvvi-d~~ 269 (373)
T 1p0f_A 202 GVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT-----ECLNPKDYDKPIYEVICEKTN-G-GVDYAV-ECA 269 (373)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS-----EEECGGGCSSCHHHHHHHHTT-S-CBSEEE-ECS
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc-----EEEecccccchHHHHHHHHhC-C-CCCEEE-ECC
Confidence 457778888887899899999999998888764 5542 211111 245555544322 3 799774 776
Q ss_pred CCCHHHHHHHHHhcccC-CEEEEE
Q 019408 80 GSDSSFLRTVFNAVKRD-GLLYLT 102 (341)
Q Consensus 80 gsp~~fld~al~~v~~g-GlL~vt 102 (341)
|.+ +.++.++++++++ |-+.+.
T Consensus 270 g~~-~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 270 GRI-ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CCH-HHHHHHHHTBCTTTCEEEEC
T ss_pred CCH-HHHHHHHHHHhcCCCEEEEE
Confidence 643 6788999999999 988864
No 309
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.87 E-value=0.23 Score=47.03 Aligned_cols=87 Identities=16% Similarity=0.144 Sum_probs=60.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe---ccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH---FDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~---~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+.|...+.+|+..|+.+|+++|.|++..+++++ .+.+ .+.-.. .|..+.+.+... + .+|+| +|.-
T Consensus 201 ~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~-----~vi~~~~~~~~~~~~v~~~~~-~-g~D~v-id~~ 268 (373)
T 2fzw_A 201 GVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGAT-----ECINPQDFSKPIQEVLIEMTD-G-GVDYS-FECI 268 (373)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCS-----EEECGGGCSSCHHHHHHHHTT-S-CBSEE-EECS
T ss_pred HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc-----eEeccccccccHHHHHHHHhC-C-CCCEE-EECC
Confidence 567788888887899889999999998888764 4542 211111 234454544322 3 79986 4776
Q ss_pred CCCHHHHHHHHHhcccC-CEEEEE
Q 019408 80 GSDSSFLRTVFNAVKRD-GLLYLT 102 (341)
Q Consensus 80 gsp~~fld~al~~v~~g-GlL~vt 102 (341)
|.+ +.++.++++++++ |-+.+.
T Consensus 269 g~~-~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 269 GNV-KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CCH-HHHHHHHHTBCTTTCEEEEC
T ss_pred CcH-HHHHHHHHhhccCCcEEEEE
Confidence 643 6788999999999 988864
No 310
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.84 E-value=0.2 Score=47.59 Aligned_cols=86 Identities=16% Similarity=0.138 Sum_probs=59.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe----ccHHHHHHHhhhcCCcccEEEeCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH----FDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~----~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+.|...+.+|+..|+.+|++.|.+++..+.+++ .+.+ .+ +.. .|..+.+.+... + .+|+| +|.
T Consensus 202 ~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~-----~v-i~~~~~~~~~~~~~~~~~~-~-g~D~v-id~ 268 (374)
T 2jhf_A 202 GVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT-----EC-VNPQDYKKPIQEVLTEMSN-G-GVDFS-FEV 268 (374)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS-----EE-ECGGGCSSCHHHHHHHHTT-S-CBSEE-EEC
T ss_pred HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc-----eE-ecccccchhHHHHHHHHhC-C-CCcEE-EEC
Confidence 557778888888899899999999998888754 4542 21 111 234444544322 3 79976 476
Q ss_pred CCCCHHHHHHHHHhcccC-CEEEEE
Q 019408 79 FGSDSSFLRTVFNAVKRD-GLLYLT 102 (341)
Q Consensus 79 ygsp~~fld~al~~v~~g-GlL~vt 102 (341)
-|.+ +.++.++++++++ |.+.+.
T Consensus 269 ~g~~-~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 269 IGRL-DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SCCH-HHHHHHHHHBCTTTCEEEEC
T ss_pred CCCH-HHHHHHHHHhhcCCcEEEEe
Confidence 5543 6788999999999 988864
No 311
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.79 E-value=0.14 Score=48.19 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=59.5
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccE-EEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRW-VVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~-~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+.|...+.+|+..|+.+|++.|.+++..+.+++ .+.+ .+ .....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 178 ~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~-----~~~~~~~~~~~~~v~~~~-~g~g~D~v-id~~g~ 246 (348)
T 2d8a_A 178 PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGAD-----YVINPFEEDVVKEVMDIT-DGNGVDVF-LEFSGA 246 (348)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCS-----EEECTTTSCHHHHHHHHT-TTSCEEEE-EECSCC
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC-----EEECCCCcCHHHHHHHHc-CCCCCCEE-EECCCC
Confidence 467778888887898779999999998887764 3442 21 111234444444432 23468987 466553
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ +.++.++++++++|.+.+..
T Consensus 247 ~-~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 247 P-KALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp H-HHHHHHHHHEEEEEEEEECC
T ss_pred H-HHHHHHHHHHhcCCEEEEEc
Confidence 3 67788999999999888643
No 312
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.54 E-value=0.42 Score=44.58 Aligned_cols=90 Identities=11% Similarity=0.027 Sum_probs=60.9
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+..|+..++.+|+++|.+++-.+++++ .+.+ .-+.....|..+.+.+.. .+..+|+++.+.-+ +
T Consensus 174 ~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~----~~i~~~~~~~~~~v~~~t-~g~g~d~~~~~~~~-~ 243 (348)
T 4eez_A 174 GLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGAD----VTINSGDVNPVDEIKKIT-GGLGVQSAIVCAVA-R 243 (348)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCS----EEEEC-CCCHHHHHHHHT-TSSCEEEEEECCSC-H
T ss_pred CccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCe----EEEeCCCCCHHHHhhhhc-CCCCceEEEEeccC-c
Confidence 456677777776677899999999987776654 5542 222233456666665542 34567887777633 2
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
..++.++++++++|-+.+..
T Consensus 244 -~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 244 -IAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp -HHHHHHHHTEEEEEEEEECC
T ss_pred -chhheeheeecCCceEEEEe
Confidence 66788999999999988643
No 313
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.49 E-value=0.32 Score=46.14 Aligned_cols=87 Identities=18% Similarity=0.268 Sum_probs=58.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|.|...+++|+..|+ +|++.|.+++..+.+++ .+.+ ..+.....|..+.+.+.. +..+|+| +|.-|.
T Consensus 174 G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~----~~~~~~~~~~~~~~~~~~--~~g~D~v-id~~g~ 241 (362)
T 2c0c_A 174 GGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD----RPINYKTEPVGTVLKQEY--PEGVDVV-YESVGG 241 (362)
T ss_dssp BTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHHC--TTCEEEE-EECSCT
T ss_pred cHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc----EEEecCChhHHHHHHHhc--CCCCCEE-EECCCH
Confidence 3566777788887888 79999999988887765 4542 111111234445554432 3468986 466564
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|-+.+.
T Consensus 242 --~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 242 --AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp --HHHHHHHHHEEEEEEEEEC
T ss_pred --HHHHHHHHHHhcCCEEEEE
Confidence 6788999999999988763
No 314
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.44 E-value=0.079 Score=50.15 Aligned_cols=86 Identities=10% Similarity=0.090 Sum_probs=58.8
Q ss_pred cccHhH-HHHh-hhCCCCEEEEeeCCHH---HHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeC
Q 019408 3 GCGIRS-LRYL-AEAKADFVMANDGNDA---HRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDID 77 (341)
Q Consensus 3 gsG~rg-ir~a-~e~ga~~V~~~Dis~~---A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlD 77 (341)
+.|..+ +.+| +..|+++|++.|.+++ -.+++++ .+. +.+.....|..+ +.+. .+ .||+| +|
T Consensus 183 ~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa-----~~v~~~~~~~~~-i~~~--~g-g~Dvv-id 248 (357)
T 2b5w_A 183 SLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA-----TYVDSRQTPVED-VPDV--YE-QMDFI-YE 248 (357)
T ss_dssp HHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC-----EEEETTTSCGGG-HHHH--SC-CEEEE-EE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC-----cccCCCccCHHH-HHHh--CC-CCCEE-EE
Confidence 567777 8889 8789988999999987 7777654 554 222111224334 4443 24 79987 57
Q ss_pred CCCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 78 SFGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 78 Pygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
.-|.+ ..++.++++++++|.+.+..
T Consensus 249 ~~g~~-~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 249 ATGFP-KHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CSCCH-HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCh-HHHHHHHHHHhcCCEEEEEe
Confidence 76753 57889999999999888643
No 315
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.10 E-value=0.4 Score=44.88 Aligned_cols=85 Identities=13% Similarity=0.224 Sum_probs=57.7
Q ss_pred cccHhHHHHhhhC--CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH-HHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSLRYLAEA--KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA-NRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgir~a~e~--ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA-~~~l~~~~~~~~~fDvIdlDPy 79 (341)
+.|...+.+|+.. |+ +|++.|.|++-.+.+++ .+.+ . ++..+. .+++.+.. .+..+|+| +|.-
T Consensus 181 ~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~--vi~~~~~~~~~~~~~-~g~g~D~v-id~~ 246 (344)
T 2h6e_A 181 GLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE----LGAD-----Y--VSEMKDAESLINKLT-DGLGASIA-IDLV 246 (344)
T ss_dssp HHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH----HTCS-----E--EECHHHHHHHHHHHH-TTCCEEEE-EESS
T ss_pred HHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH----hCCC-----E--EeccccchHHHHHhh-cCCCccEE-EECC
Confidence 4577888888877 88 59999999998888765 4542 2 232211 22333332 24479987 4666
Q ss_pred CCCHHHHHHHHHhcccCCEEEEE
Q 019408 80 GSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 gsp~~fld~al~~v~~gGlL~vt 102 (341)
|.+ ..++.++++++++|-+.+.
T Consensus 247 g~~-~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 247 GTE-ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp CCH-HHHHHHHHHEEEEEEEEEC
T ss_pred CCh-HHHHHHHHHhhcCCEEEEe
Confidence 642 4788999999999988864
No 316
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.88 E-value=0.29 Score=45.86 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=58.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|.|...+..|+..|+ +|++.|.|++-.+.+++ .+.+ ..+.....|..+.+.+.. ..+|+| +|.-|.
T Consensus 174 G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~----~~~d~~~~~~~~~~~~~~---~~~d~v-id~~g~ 240 (339)
T 1rjw_A 174 GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD----LVVNPLKEDAAKFMKEKV---GGVHAA-VVTAVS 240 (339)
T ss_dssp STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS----EEECTTTSCHHHHHHHHH---SSEEEE-EESSCC
T ss_pred CHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC----EEecCCCccHHHHHHHHh---CCCCEE-EECCCC
Confidence 3567888888888888 89999999998887764 4441 111111234444444332 368977 466554
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ +.++.++++++++|.+.+..
T Consensus 241 ~-~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 241 K-PAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp H-HHHHHHHHHEEEEEEEEECC
T ss_pred H-HHHHHHHHHhhcCCEEEEec
Confidence 3 67788999999999888643
No 317
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=91.70 E-value=0.17 Score=47.95 Aligned_cols=91 Identities=12% Similarity=0.026 Sum_probs=63.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC--C
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--F 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--y 79 (341)
+|+|..+++.++...--+++..|. |..++..+++++..+. +++++..+|.++- ....+|+|++== .
T Consensus 188 gG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~-----~rv~~~~gD~~~~------~~~~~D~~~~~~vlh 255 (353)
T 4a6d_A 188 GGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEE-----EQIDFQEGDFFKD------PLPEADLYILARVLH 255 (353)
T ss_dssp CTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--C-----CSEEEEESCTTTS------CCCCCSEEEEESSGG
T ss_pred CCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhccc-----CceeeecCccccC------CCCCceEEEeeeecc
Confidence 689999999998633346788887 8899999988764433 5789999997631 223579887632 1
Q ss_pred CCC----HHHHHHHHHhcccCCEEEEEec
Q 019408 80 GSD----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gsp----~~fld~al~~v~~gGlL~vt~T 104 (341)
-.+ ...|..+.+++++||.|.|...
T Consensus 256 ~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 112 3457778889999998887543
No 318
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.65 E-value=0.3 Score=45.84 Aligned_cols=86 Identities=14% Similarity=0.184 Sum_probs=57.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+.+|+..|+ +|++.|.+++..+.+++ .+.+ .+.-...|..+.+.+.. .+..+|+| +|.-|.
T Consensus 171 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~-----~v~~~~~~~~~~v~~~~-~~~g~Dvv-id~~g~- 237 (342)
T 4eye_A 171 GIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKS----VGAD-----IVLPLEEGWAKAVREAT-GGAGVDMV-VDPIGG- 237 (342)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----HTCS-----EEEESSTTHHHHHHHHT-TTSCEEEE-EESCC--
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCc-----EEecCchhHHHHHHHHh-CCCCceEE-EECCch-
Confidence 456677788887888 79999999988887765 3542 22212244444444432 24469977 466565
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|.+.+.
T Consensus 238 -~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 238 -PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp --CHHHHHHTEEEEEEEEEC
T ss_pred -hHHHHHHHhhcCCCEEEEE
Confidence 5678899999999999864
No 319
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=91.42 E-value=0.059 Score=45.22 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=50.4
Q ss_pred EeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEe-CC--C--CCCHHHHHHHHHhcccC
Q 019408 22 ANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDI-DS--F--GSDSSFLRTVFNAVKRD 96 (341)
Q Consensus 22 ~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdl-DP--y--gsp~~fld~al~~v~~g 96 (341)
.+|+|+..++.+++++.. .+++.++|+.++... ......||+|+. .- + ..+..++..+.+.|++|
T Consensus 25 ~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 25 PVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQS-AHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPG 94 (176)
T ss_dssp CHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGG-CCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEE
T ss_pred eeeCCHHHHHHHHHhccc---------CcEEEEechhcCccc-cCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCC
Confidence 389999999999987642 246678888754210 013467999987 32 1 23467888999999999
Q ss_pred CEEEEE
Q 019408 97 GLLYLT 102 (341)
Q Consensus 97 GlL~vt 102 (341)
|.|.+.
T Consensus 95 G~l~~~ 100 (176)
T 2ld4_A 95 GCLFLK 100 (176)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999984
No 320
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=91.39 E-value=0.1 Score=49.22 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=55.6
Q ss_pred EEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC-------HHHHHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhc
Q 019408 50 WVVTHFDANRVLSECYLKREFFDLIDIDSFGSD-------SSFLRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYG 122 (341)
Q Consensus 50 ~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp-------~~fld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg 122 (341)
.++..+||.+.|.+.. ..+||+|++|+|+.. .+++....+++++||.|. |.| +-
T Consensus 168 L~l~~GDa~~~l~~l~--~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la-TYt-----aa----------- 228 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVE--NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV-SYS-----SS----------- 228 (308)
T ss_dssp EEEEESCHHHHGGGCC--SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE-ESC-----CC-----------
T ss_pred EEEEechHHHHHhhhc--ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE-EEe-----Cc-----------
Confidence 4578999999987652 347999999999742 257777788999999998 464 21
Q ss_pred cccCCCCCchhhhHHHHHHHHHHHHHhcCCcEEEEEecc
Q 019408 123 AYILPMPYSNEIGLRMLIGGAVREASAQGYHVSPLFSYY 161 (341)
Q Consensus 123 ~~~~~~~~~~E~~lR~ll~~i~~~Aa~~~~~i~Pl~s~~ 161 (341)
+.|.|.....|..|+-+--+.
T Consensus 229 ------------------g~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 229 ------------------LSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp ------------------HHHHHHHHHTTCEEEEEECC-
T ss_pred ------------------HHHHHHHHHCCCEEEecCCCC
Confidence 466778888888887664443
No 321
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.30 E-value=0.12 Score=48.49 Aligned_cols=87 Identities=11% Similarity=0.073 Sum_probs=58.9
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccE-EEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRW-VVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~-~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
|.|...+.+|+..|+.+|++.|.+++-.+.+++- . +.+ .....|..+.+.+.. +..+|+| +|.-|.
T Consensus 175 ~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-----a-----~~v~~~~~~~~~~~~~~~~--~~g~D~v-id~~g~ 241 (343)
T 2dq4_A 175 PIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-----A-----DRLVNPLEEDLLEVVRRVT--GSGVEVL-LEFSGN 241 (343)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-----C-----SEEECTTTSCHHHHHHHHH--SSCEEEE-EECSCC
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-----H-----HhccCcCccCHHHHHHHhc--CCCCCEE-EECCCC
Confidence 5677888888888987799999999888777552 2 111 111234444444432 4579987 466564
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ +.++.++++++++|.+.+..
T Consensus 242 ~-~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 242 E-AAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp H-HHHHHHHHHEEEEEEEEECC
T ss_pred H-HHHHHHHHHHhcCCEEEEEe
Confidence 3 66788999999999888643
No 322
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=91.27 E-value=0.04 Score=51.70 Aligned_cols=84 Identities=18% Similarity=0.062 Sum_probs=53.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeC----CHHHHHHHHHHHHHcCCCCCCCccEEEEec-cHHHHHHHhhhcCCcccEEEe
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDG----NDAHRRVILGNLKSIERGSGDEKRWVVTHF-DANRVLSECYLKREFFDLIDI 76 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Di----s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~-DA~~~l~~~~~~~~~fDvIdl 76 (341)
||+|..+..++. . .+|+++|+ ++..++.+. . ... ....+++.++ |+..+ ..++||+|+.
T Consensus 91 cG~G~~s~~la~-~--~~V~gvD~~~~~~~~~~~~~~--~--~~~---~~~~v~~~~~~D~~~l------~~~~fD~V~s 154 (305)
T 2p41_A 91 CGRGGWSYYCGG-L--KNVREVKGLTKGGPGHEEPIP--M--STY---GWNLVRLQSGVDVFFI------PPERCDTLLC 154 (305)
T ss_dssp CTTSHHHHHHHT-S--TTEEEEEEECCCSTTSCCCCC--C--CST---TGGGEEEECSCCTTTS------CCCCCSEEEE
T ss_pred CCCCHHHHHHHh-c--CCEEEEeccccCchhHHHHHH--h--hhc---CCCCeEEEeccccccC------CcCCCCEEEE
Confidence 799999988887 4 36999999 553221110 0 111 0135777888 87643 2358999999
Q ss_pred CC-C--CCCH-------HHHHHHHHhcccCCEEEE
Q 019408 77 DS-F--GSDS-------SFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 77 DP-y--gsp~-------~fld~al~~v~~gGlL~v 101 (341)
|- + |... ..+..+.+.|++||.+++
T Consensus 155 d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 155 DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 95 2 2210 234556688999998887
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.19 E-value=0.48 Score=40.41 Aligned_cols=87 Identities=13% Similarity=0.074 Sum_probs=53.0
Q ss_pred ccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCCH
Q 019408 4 CGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSDS 83 (341)
Q Consensus 4 sG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp~ 83 (341)
.|...++.++..|+ +|++.|.+++..+.+++ .+.. ..+.....|..+.+.+... +..+|+|+ |--|.
T Consensus 51 iG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~~~~~~~-~~~~D~vi-~~~g~-- 117 (198)
T 1pqw_A 51 VGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE----YVGDSRSVDFADEILELTD-GYGVDVVL-NSLAG-- 117 (198)
T ss_dssp HHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS----EEEETTCSTHHHHHHHHTT-TCCEEEEE-ECCCT--
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC----EEeeCCcHHHHHHHHHHhC-CCCCeEEE-ECCch--
Confidence 34444555665687 69999999987776543 3431 1111122344444443322 33699887 44352
Q ss_pred HHHHHHHHhcccCCEEEEEe
Q 019408 84 SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 84 ~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.+++.++++|.+.+..
T Consensus 118 ~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 118 EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HHHHHHHHTEEEEEEEEECS
T ss_pred HHHHHHHHHhccCCEEEEEc
Confidence 67889999999999888643
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.18 E-value=0.27 Score=46.54 Aligned_cols=87 Identities=15% Similarity=0.096 Sum_probs=59.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe-ccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH-FDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~-~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+.|...+.+|+..|+ +|++.|.+++-.+.+++ .+.+ .+.-.. .|..+.+.+.. .+..+|+| +|.-|.
T Consensus 200 ~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~vi~~~~~~~~~~v~~~~-~g~g~D~v-id~~g~ 267 (363)
T 3uog_A 200 GVALFGLQIAKATGA-EVIVTSSSREKLDRAFA----LGAD-----HGINRLEEDWVERVYALT-GDRGADHI-LEIAGG 267 (363)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HTCS-----EEEETTTSCHHHHHHHHH-TTCCEEEE-EEETTS
T ss_pred HHHHHHHHHHHHcCC-EEEEEecCchhHHHHHH----cCCC-----EEEcCCcccHHHHHHHHh-CCCCceEE-EECCCh
Confidence 457777888887888 79999999998888654 4542 211111 34444454432 34579976 466553
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.++++++++|-+.+..
T Consensus 268 --~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 268 --AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp --SCHHHHHHHEEEEEEEEEEC
T ss_pred --HHHHHHHHHhhcCCEEEEEe
Confidence 56788999999999998754
No 325
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=90.94 E-value=0.11 Score=48.20 Aligned_cols=49 Identities=14% Similarity=-0.050 Sum_probs=40.6
Q ss_pred ccccHhHHHHhhhCCCC---EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHH
Q 019408 2 CGCGIRSLRYLAEAKAD---FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRV 60 (341)
Q Consensus 2 agsG~rgir~a~e~ga~---~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~ 60 (341)
+|+|..++..+.. +.. +|+++|+|++.++.+++|. . .+++++++|+.++
T Consensus 51 ~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~----~-----~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 51 PGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF----G-----ELLELHAGDALTF 102 (279)
T ss_dssp CTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH----G-----GGEEEEESCGGGC
T ss_pred cccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc----C-----CCcEEEECChhcC
Confidence 7999999999874 433 3999999999999999994 1 3678999999875
No 326
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=90.90 E-value=0.43 Score=44.25 Aligned_cols=90 Identities=16% Similarity=0.092 Sum_probs=57.0
Q ss_pred HHHhhh-CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhh--cCCccc-----EEEeCC--
Q 019408 9 LRYLAE-AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYL--KREFFD-----LIDIDS-- 78 (341)
Q Consensus 9 ir~a~e-~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~--~~~~fD-----vIdlDP-- 78 (341)
.+.+.+ ..-.+|+.+|+|+..++..++++..+.. ..+++++.|+.+.-..+.. ....|| .|.+--
T Consensus 96 ~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-----~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avL 170 (277)
T 3giw_A 96 HEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-----GRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIV 170 (277)
T ss_dssp HHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-----SEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCG
T ss_pred HHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-----CcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhH
Confidence 444443 1234799999999999999998864322 3678999999875221100 012355 243332
Q ss_pred -CCC----CHHHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGS----DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygs----p~~fld~al~~v~~gGlL~vt~ 103 (341)
|-. |...+....+.|++||+|.++.
T Consensus 171 H~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 171 HFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp GGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred hcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 221 2356777888999999999853
No 327
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.48 E-value=0.54 Score=43.70 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=58.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+++++..|+ +|++.|.+++..+.+.+. .+.. ..+.....|..+.+.+.. +..+|+| +|.-|.
T Consensus 161 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~---~g~~----~~~~~~~~~~~~~~~~~~--~~~~d~v-i~~~g~- 228 (336)
T 4b7c_A 161 AVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEE---LGFD----GAIDYKNEDLAAGLKREC--PKGIDVF-FDNVGG- 228 (336)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---TCCS----EEEETTTSCHHHHHHHHC--TTCEEEE-EESSCH-
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cCCC----EEEECCCHHHHHHHHHhc--CCCceEE-EECCCc-
Confidence 456667777777888 899999999888877332 3431 111122345555555443 3479976 566553
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|-+.+.
T Consensus 229 -~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 229 -EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp -HHHHHHHTTEEEEEEEEEC
T ss_pred -chHHHHHHHHhhCCEEEEE
Confidence 6788999999999998863
No 328
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.34 E-value=0.57 Score=43.56 Aligned_cols=88 Identities=15% Similarity=0.159 Sum_probs=56.7
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.+ ..+.....|..+.+.+.. .+..+|+|+ |.-|.
T Consensus 157 giG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~i~~~~-~~~~~d~vi-~~~g~- 224 (333)
T 1wly_A 157 GMGHIMVPWARHLGA-TVIGTVSTEEKAETARK----LGCH----HTINYSTQDFAEVVREIT-GGKGVDVVY-DSIGK- 224 (333)
T ss_dssp TTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHH-TTCCEEEEE-ECSCT-
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC----EEEECCCHHHHHHHHHHh-CCCCCeEEE-ECCcH-
Confidence 456666777777787 79999999988887765 3431 111112234444444332 234689875 66554
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.++++++++|.+.+..
T Consensus 225 -~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 225 -DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp -TTHHHHHHTEEEEEEEEECC
T ss_pred -HHHHHHHHhhccCCEEEEEe
Confidence 66788999999999887643
No 329
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.81 E-value=0.73 Score=42.82 Aligned_cols=88 Identities=18% Similarity=0.159 Sum_probs=58.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+.+++..|+ +|++.|.+++-.+.+++ .+.+ ..+.....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 160 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~----~~~~~~~~~~~~~~~~~~-~~~g~D~v-id~~g~- 227 (334)
T 3qwb_A 160 GVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGAE----YLINASKEDILRQVLKFT-NGKGVDAS-FDSVGK- 227 (334)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHHT-TTSCEEEE-EECCGG-
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc----EEEeCCCchHHHHHHHHh-CCCCceEE-EECCCh-
Confidence 455666777777788 79999999998887765 4441 111112245555554432 24579976 466554
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.++++++++|.+.+..
T Consensus 228 -~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 228 -DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp -GGHHHHHHHEEEEEEEEECC
T ss_pred -HHHHHHHHHhccCCEEEEEc
Confidence 67888999999999988743
No 330
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.74 E-value=0.62 Score=43.55 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=57.1
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.. ..+.....|..+.+.+.. .+..+|+|+ |.-| +
T Consensus 178 ~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~----~ga~----~~~d~~~~~~~~~~~~~~-~~~~~d~vi-~~~g-~ 245 (343)
T 2eih_A 178 GVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKA----LGAD----ETVNYTHPDWPKEVRRLT-GGKGADKVV-DHTG-A 245 (343)
T ss_dssp TTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCS----EEEETTSTTHHHHHHHHT-TTTCEEEEE-ESSC-S
T ss_pred hHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCC----EEEcCCcccHHHHHHHHh-CCCCceEEE-ECCC-H
Confidence 566777788877788 79999999998888764 3441 111111234444444332 234689774 6655 2
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.++++++++|-+.+..
T Consensus 246 -~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 246 -LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp -SSHHHHHHHEEEEEEEEESS
T ss_pred -HHHHHHHHhhccCCEEEEEe
Confidence 56788999999999887643
No 331
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.66 E-value=0.46 Score=44.44 Aligned_cols=88 Identities=14% Similarity=0.035 Sum_probs=58.5
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+.+|+..|+ +|++.|.+++..+.+++ .+.+ ..+.....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 156 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lga~----~~~~~~~~~~~~~~~~~~-~~~g~Dvv-id~~g~- 223 (340)
T 3gms_A 156 AIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR----LGAA----YVIDTSTAPLYETVMELT-NGIGADAA-IDSIGG- 223 (340)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH----HTCS----EEEETTTSCHHHHHHHHT-TTSCEEEE-EESSCH-
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----CCCc----EEEeCCcccHHHHHHHHh-CCCCCcEE-EECCCC-
Confidence 567788888887888 79999999988888775 3442 111112244444444432 34579977 466554
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+....++++++++|.+.+..
T Consensus 224 -~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 224 -PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp -HHHHHHHHTEEEEEEEEECC
T ss_pred -hhHHHHHHHhcCCCEEEEEe
Confidence 45566779999999998743
No 332
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.61 E-value=0.6 Score=43.30 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=58.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+.+++..|+ +|++.|.+++-.+.+++ .+.+ ..+.....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 152 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~----~~~~~~~~~~~~~~~~~~-~~~g~Dvv-id~~g~- 219 (325)
T 3jyn_A 152 GVGSLACQWAKALGA-KLIGTVSSPEKAAHAKA----LGAW----ETIDYSHEDVAKRVLELT-DGKKCPVV-YDGVGQ- 219 (325)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHT-TTCCEEEE-EESSCG-
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC----EEEeCCCccHHHHHHHHh-CCCCceEE-EECCCh-
Confidence 446666677776788 79999999998888764 3442 111112344444444432 34578976 566564
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+..++++++++|-+.+..
T Consensus 220 -~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 220 -DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp -GGHHHHHTTEEEEEEEEECC
T ss_pred -HHHHHHHHHhcCCCEEEEEe
Confidence 66788999999999998754
No 333
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=89.08 E-value=4.3 Score=32.50 Aligned_cols=55 Identities=11% Similarity=-0.004 Sum_probs=40.5
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
-+|..+|-++...+.+++-++..++ .+.....|..+.+.........+|+|++|-
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~------~v~~~~~~~~~al~~l~~~~~~~dliilD~ 91 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGF------NIIDTAADGEEAVIKYKNHYPNIDIVTLXI 91 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEEEEESSHHHHHHHHHHHGGGCCEEEECS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCC------eEEEEECCHHHHHHHHHhcCCCCCEEEEec
Confidence 3799999999999999999987765 232245666666665543322699999997
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.07 E-value=0.36 Score=45.92 Aligned_cols=83 Identities=22% Similarity=0.306 Sum_probs=55.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|++ |++.|.|++-.+.+++ .+.+ .+ +...+. +++.+.. ..+|+| +|.-|.+
T Consensus 205 ~vG~~aiqlak~~Ga~-Vi~~~~~~~~~~~a~~----lGa~-----~v-i~~~~~-~~~~~~~---~g~Dvv-id~~g~~ 268 (369)
T 1uuf_A 205 GLGHMGIKLAHAMGAH-VVAFTTSEAKREAAKA----LGAD-----EV-VNSRNA-DEMAAHL---KSFDFI-LNTVAAP 268 (369)
T ss_dssp HHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHH----HTCS-----EE-EETTCH-HHHHTTT---TCEEEE-EECCSSC
T ss_pred HHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH----cCCc-----EE-eccccH-HHHHHhh---cCCCEE-EECCCCH
Confidence 4577888888878885 9999999988888765 4542 21 222222 3333322 368987 4665543
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|.+.+.
T Consensus 269 -~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 269 -HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp -CCHHHHHTTEEEEEEEEEC
T ss_pred -HHHHHHHHHhccCCEEEEe
Confidence 3567899999999988763
No 335
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=88.85 E-value=5.1 Score=31.40 Aligned_cols=54 Identities=9% Similarity=0.036 Sum_probs=37.0
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.++..++..... -.+.....+..+.+.... ...+|+|++|-
T Consensus 4 ~ILivdd~~~~~~~l~~~L~~~~~~----~~~~~~~~~~~~al~~~~--~~~~dlvllD~ 57 (141)
T 3cu5_A 4 RILIVDDEKLTRDGLIANINWKALS----FDQIDQADDGINAIQIAL--KHPPNVLLTDV 57 (141)
T ss_dssp EEEEECSCHHHHHHHHHHCCGGGSC----CSEEEEESSHHHHHHHHT--TSCCSEEEEES
T ss_pred eEEEEeCCHHHHHHHHHHHHHccCC----cEEeeecccHHHHHHHHh--cCCCCEEEEeC
Confidence 6899999999999998877642221 122225667777766543 34699999996
No 336
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=88.83 E-value=7.4 Score=30.67 Aligned_cols=56 Identities=14% Similarity=0.193 Sum_probs=40.0
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhh-------hcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECY-------LKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~-------~~~~~fDvIdlDP 78 (341)
-+|..+|-++...+.+++-++..+.. ..+ ....|..+.+..+. .....+|+|++|-
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~----~~v-~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~ 67 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVN----NEI-IAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDL 67 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCC----CCE-EEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCc----ceE-EEeCCHHHHHHHHhccccccccccCCCCEEEEeC
Confidence 46899999999999999999987752 123 24456666665442 1245799999996
No 337
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.81 E-value=0.72 Score=42.67 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=55.1
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.. ..+.....|..+.+.+.. .+..+|+|+ |.-|
T Consensus 152 giG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~----~g~~----~~~~~~~~~~~~~~~~~~-~~~~~D~vi-~~~g-- 218 (327)
T 1qor_A 152 GVGLIACQWAKALGA-KLIGTVGTAQKAQSALK----AGAW----QVINYREEDLVERLKEIT-GGKKVRVVY-DSVG-- 218 (327)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHT-TTCCEEEEE-ECSC--
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC----EEEECCCccHHHHHHHHh-CCCCceEEE-ECCc--
Confidence 345555666666787 79999999988887765 3431 111111234444444332 234689874 5545
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
.+.++.++++++++|-+.+..
T Consensus 219 ~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 219 RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp GGGHHHHHHTEEEEEEEEECC
T ss_pred hHHHHHHHHHhcCCCEEEEEe
Confidence 367788999999999887643
No 338
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.61 E-value=0.78 Score=43.17 Aligned_cols=88 Identities=18% Similarity=0.237 Sum_probs=55.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.+ ..+.....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 174 giG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~g~~----~~~~~~~~~~~~~~~~~~-~~~~~d~v-i~~~G~- 241 (354)
T 2j8z_A 174 GVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEK----LGAA----AGFNYKKEDFSEATLKFT-KGAGVNLI-LDCIGG- 241 (354)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHT-TTSCEEEE-EESSCG-
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCc----EEEecCChHHHHHHHHHh-cCCCceEE-EECCCc-
Confidence 345555666776787 79999999988887743 3431 111111234444444332 23468987 466564
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.+..++++++++|.+.+..
T Consensus 242 -~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 242 -SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp -GGHHHHHHHEEEEEEEEECC
T ss_pred -hHHHHHHHhccCCCEEEEEe
Confidence 46778899999999888643
No 339
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=88.29 E-value=0.29 Score=45.27 Aligned_cols=84 Identities=17% Similarity=0.282 Sum_probs=57.1
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+ +|++.|.|++-.+.+++ .+.+ . .+...|... +.. ..+..+|+| +|.-|.
T Consensus 158 ~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~-vi~~~~~~~-~~~--~~~~~~d~v-~d~~g~- 221 (324)
T 3nx4_A 158 GVGSTAVALLHKLGY-QVAAVSGRESTHGYLKS----LGAN-----R-ILSRDEFAE-SRP--LEKQLWAGA-IDTVGD- 221 (324)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHH----HTCS-----E-EEEGGGSSC-CCS--SCCCCEEEE-EESSCH-
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCC-----E-EEecCCHHH-HHh--hcCCCccEE-EECCCc-
Confidence 567777888887898 79999999998888865 4542 2 122222111 111 123468964 677664
Q ss_pred HHHHHHHHHhcccCCEEEEEe
Q 019408 83 SSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt~ 103 (341)
+.++.++++++++|-+.+..
T Consensus 222 -~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 222 -KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp -HHHHHHHHTEEEEEEEEECC
T ss_pred -HHHHHHHHHHhcCCEEEEEe
Confidence 68899999999999998743
No 340
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.08 E-value=1.1 Score=41.94 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=56.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...++.++..|+.+|++.|.+++..+.+++. .+.. ..+.....|..+.+.+... + .+|+|+ |.-|.
T Consensus 172 giG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~----~~~d~~~~~~~~~~~~~~~-~-~~d~vi-~~~G~- 240 (357)
T 2zb4_A 172 ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD----AAINYKKDNVAEQLRESCP-A-GVDVYF-DNVGG- 240 (357)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS----EEEETTTSCHHHHHHHHCT-T-CEEEEE-ESCCH-
T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc----eEEecCchHHHHHHHHhcC-C-CCCEEE-ECCCH-
Confidence 4455556667767887899999999887777653 2331 1111112344444444322 2 688764 55553
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|-+.+.
T Consensus 241 -~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 241 -NISDTVISQMNENSHIILC 259 (357)
T ss_dssp -HHHHHHHHTEEEEEEEEEC
T ss_pred -HHHHHHHHHhccCcEEEEE
Confidence 7788999999999988863
No 341
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=88.00 E-value=0.24 Score=46.55 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=58.3
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
+|+|..++..+....-.+++.+|+ +..++.+++ . ..+++..+|+++- . + .||+|++--
T Consensus 197 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-----~~v~~~~~d~~~~-----~-p-~~D~v~~~~~lh 257 (352)
T 1fp2_A 197 GGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-----NNLTYVGGDMFTS-----I-P-NADAVLLKYILH 257 (352)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-----TTEEEEECCTTTC-----C-C-CCSEEEEESCGG
T ss_pred CCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-----CCcEEEeccccCC-----C-C-CccEEEeehhhc
Confidence 699999999987532347999999 888776554 1 1377888998641 1 2 399887643
Q ss_pred -CCCCH--HHHHHHHHhccc---CCEEEEEe
Q 019408 79 -FGSDS--SFLRTVFNAVKR---DGLLYLTS 103 (341)
Q Consensus 79 -ygsp~--~fld~al~~v~~---gGlL~vt~ 103 (341)
+..+. .++..+.++|++ ||.|.+..
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 22122 567788889999 99998754
No 342
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=87.55 E-value=5.1 Score=31.15 Aligned_cols=54 Identities=13% Similarity=-0.037 Sum_probs=39.2
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+ ....+..+.+.........+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~------~v-~~~~~~~~a~~~~~~~~~~~dlvi~d~ 57 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGN------EV-LTASSSTEGLRIFTENCNSIDVVITDM 57 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EE-EEESSHHHHHHHHHHTTTTCCEEEEES
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc------eE-EEeCCHHHHHHHHHhCCCCCCEEEEeC
Confidence 4689999999999999999987664 22 244555555554432245799999996
No 343
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=87.44 E-value=0.31 Score=46.26 Aligned_cols=83 Identities=11% Similarity=-0.009 Sum_probs=58.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
+|+|...+..+....-.+++.+|+ +..++.+++ . ..+++..+|+++- . + .||+|++--
T Consensus 218 ~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-----~~v~~~~~d~~~~-----~-~-~~D~v~~~~~lh 278 (372)
T 1fp1_D 218 GGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-----SGIEHVGGDMFAS-----V-P-QGDAMILKAVCH 278 (372)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-----TTEEEEECCTTTC-----C-C-CEEEEEEESSGG
T ss_pred CCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-----CCCEEEeCCcccC-----C-C-CCCEEEEecccc
Confidence 699999999987532347889999 888766543 1 2477889998741 1 2 299887743
Q ss_pred -CCCCH--HHHHHHHHhcccCCEEEEEe
Q 019408 79 -FGSDS--SFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 79 -ygsp~--~fld~al~~v~~gGlL~vt~ 103 (341)
+..+. .++..+.+.|++||.|.+..
T Consensus 279 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 279 NWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 12122 56778889999999999753
No 344
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.27 E-value=1.5 Score=40.55 Aligned_cols=86 Identities=17% Similarity=0.167 Sum_probs=55.2
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe-ccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH-FDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~-~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.. ..+.... .|..+.+.+... ..+|+|+ |.-|.
T Consensus 157 giG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~vi-~~~g~ 224 (333)
T 1v3u_A 157 AVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IGFD----AAFNYKTVNSLEEALKKASP--DGYDCYF-DNVGG 224 (333)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS----EEEETTSCSCHHHHHHHHCT--TCEEEEE-ESSCH
T ss_pred cHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCc----EEEecCCHHHHHHHHHHHhC--CCCeEEE-ECCCh
Confidence 445555666766788 79999999988777633 3431 1111122 455555554432 3689874 55453
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|.+.+.
T Consensus 225 --~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 225 --EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp --HHHHHHHTTEEEEEEEEEC
T ss_pred --HHHHHHHHHHhcCCEEEEE
Confidence 5688999999999988763
No 345
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.19 E-value=1.3 Score=41.43 Aligned_cols=84 Identities=21% Similarity=0.256 Sum_probs=57.2
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+ +|++. .+++..+.+++ .+.+ .+. ...|..+.+.+.. .+..+|+| +|.-|.
T Consensus 162 ~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~----lGa~-----~i~-~~~~~~~~~~~~~-~~~g~D~v-id~~g~- 226 (343)
T 3gaz_A 162 GVGHVAIQIALARGA-RVFAT-ARGSDLEYVRD----LGAT-----PID-ASREPEDYAAEHT-AGQGFDLV-YDTLGG- 226 (343)
T ss_dssp HHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHH----HTSE-----EEE-TTSCHHHHHHHHH-TTSCEEEE-EESSCT-
T ss_pred HHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHH----cCCC-----Eec-cCCCHHHHHHHHh-cCCCceEE-EECCCc-
Confidence 456677788887888 68888 88887777654 4542 222 3345555554432 34579965 567664
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|-+.+.
T Consensus 227 -~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 227 -PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp -HHHHHHHHHEEEEEEEEES
T ss_pred -HHHHHHHHHHhcCCeEEEE
Confidence 7888999999999998863
No 346
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=86.72 E-value=9.5 Score=29.59 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=50.6
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC---CC-CHHHHHHHHHhc
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF---GS-DSSFLRTVFNAV 93 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy---gs-p~~fld~al~~v 93 (341)
.+|..+|-++...+.+++-++..+. .+. ...|..+.+..... +..+|+|++|-. |. ...++.. ++..
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~-~~~~dlvi~D~~l~~~~~g~~~~~~-l~~~ 76 (140)
T 3h5i_A 6 KKILIVEDSKFQAKTIANILNKYGY------TVE-IALTGEAAVEKVSG-GWYPDLILMDIELGEGMDGVQTALA-IQQI 76 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHT-TCCCSEEEEESSCSSSCCHHHHHHH-HHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCC------EEE-EecChHHHHHHHhc-CCCCCEEEEeccCCCCCCHHHHHHH-HHhC
Confidence 4799999999999999999987765 232 45566666655422 357999999962 22 2233333 3333
Q ss_pred ccCCEEEEEecC
Q 019408 94 KRDGLLYLTSTD 105 (341)
Q Consensus 94 ~~gGlL~vt~TD 105 (341)
..--++.+|..+
T Consensus 77 ~~~~ii~ls~~~ 88 (140)
T 3h5i_A 77 SELPVVFLTAHT 88 (140)
T ss_dssp CCCCEEEEESSS
T ss_pred CCCCEEEEECCC
Confidence 444566676653
No 347
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.69 E-value=0.69 Score=43.32 Aligned_cols=88 Identities=13% Similarity=0.048 Sum_probs=56.1
Q ss_pred cccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
|.|...++.++.. |+ +|++.|.|++..+.+++ .+.+ ..+.....|..+.+.+.... ..+|+|+ |.-|.
T Consensus 182 ~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~----~g~~----~~~~~~~~~~~~~~~~~~~~-~~~d~vi-~~~g~ 250 (347)
T 1jvb_A 182 GLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKR----AGAD----YVINASMQDPLAEIRRITES-KGVDAVI-DLNNS 250 (347)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHH----HTCS----EEEETTTSCHHHHHHHHTTT-SCEEEEE-ESCCC
T ss_pred cHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCC----EEecCCCccHHHHHHHHhcC-CCceEEE-ECCCC
Confidence 5677778888877 88 69999999998887754 3431 11111123333334333211 3689764 55454
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+ ..++.++++++++|.+.+.
T Consensus 251 ~-~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 251 E-KTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp H-HHHTTGGGGEEEEEEEEEC
T ss_pred H-HHHHHHHHHHhcCCEEEEE
Confidence 2 4778899999999988763
No 348
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.64 E-value=1.7 Score=40.90 Aligned_cols=87 Identities=10% Similarity=0.196 Sum_probs=55.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.. ..+.....|..+.+.+.. .+..+|+| +|.-|.
T Consensus 182 giG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~----~~~d~~~~~~~~~~~~~~-~~~~~D~v-i~~~G~- 249 (351)
T 1yb5_A 182 GVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGAH----EVFNHREVNYIDKIKKYV-GEKGIDII-IEMLAN- 249 (351)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS----EEEETTSTTHHHHHHHHH-CTTCEEEE-EESCHH-
T ss_pred hHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCCC----EEEeCCCchHHHHHHHHc-CCCCcEEE-EECCCh-
Confidence 455566677777787 69999999988876543 3431 111112234444444332 23468987 455453
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|-+.+.
T Consensus 250 -~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 250 -VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp -HHHHHHHHHEEEEEEEEEC
T ss_pred -HHHHHHHHhccCCCEEEEE
Confidence 5678899999999988863
No 349
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=86.38 E-value=0.83 Score=42.75 Aligned_cols=88 Identities=15% Similarity=0.066 Sum_probs=55.8
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEE-eccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVT-HFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~-~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
|.|...++.++..|+ +|++.|.+++..+.+++ .+.. ..+.+. ..|..+.+.+... + .+|+|+ |.-|.
T Consensus 181 giG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~~~~~~~~-~-~~D~vi-~~~g~ 248 (347)
T 2hcy_A 181 GLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGGE----VFIDFTKEKDIVGAVLKATD-G-GAHGVI-NVSVS 248 (347)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTCC----EEEETTTCSCHHHHHHHHHT-S-CEEEEE-ECSSC
T ss_pred hHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCCc----eEEecCccHhHHHHHHHHhC-C-CCCEEE-ECCCc
Confidence 456666777776787 79999999887776654 3431 111111 2345555554322 3 689875 44443
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
.+.++.++++++++|-+.+..
T Consensus 249 -~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 249 -EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp -HHHHHHHTTSEEEEEEEEECC
T ss_pred -HHHHHHHHHHHhcCCEEEEEe
Confidence 267888999999999887643
No 350
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=85.92 E-value=0.13 Score=43.44 Aligned_cols=63 Identities=19% Similarity=0.158 Sum_probs=38.7
Q ss_pred ccccH-hHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEE-EeCCC
Q 019408 2 CGCGI-RSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLI-DIDSF 79 (341)
Q Consensus 2 agsG~-rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvI-dlDPy 79 (341)
+|+|. .++..+.+.|.+ |+++|+|+.|++ +++.|.++-..+.. +.||+| ++-|
T Consensus 44 ~G~g~~vA~~La~~~g~~-V~atDInp~Av~--------------------~v~dDiF~P~~~~Y---~~~DLIYsirP- 98 (153)
T 2k4m_A 44 AGRFLYVSDYIRKHSKVD-LVLTDIKPSHGG--------------------IVRDDITSPRMEIY---RGAALIYSIRP- 98 (153)
T ss_dssp CTTCCHHHHHHHHHSCCE-EEEECSSCSSTT--------------------EECCCSSSCCHHHH---TTEEEEEEESC-
T ss_pred cCCChHHHHHHHHhCCCe-EEEEECCccccc--------------------eEEccCCCCccccc---CCcCEEEEcCC-
Confidence 47774 555555436754 999999999887 23445544322221 269999 9999
Q ss_pred CCCHHHHHHHHH
Q 019408 80 GSDSSFLRTVFN 91 (341)
Q Consensus 80 gsp~~fld~al~ 91 (341)
|.+.....++
T Consensus 99 --P~El~~~i~~ 108 (153)
T 2k4m_A 99 --PAEIHSSLMR 108 (153)
T ss_dssp --CTTTHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 6444433333
No 351
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=85.67 E-value=0.65 Score=43.00 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=52.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH-HHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA-NRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA-~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
|.|...+.+|+..|++ |++.|.+++-.+.+++ .+.+ .+ +...|. .+.+... .+..+|+| +|.-|.
T Consensus 161 ~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~~----lGa~-----~~-i~~~~~~~~~~~~~--~~~~~d~v-id~~g~ 226 (328)
T 1xa0_A 161 GVGSLAVSMLAKRGYT-VEASTGKAAEHDYLRV----LGAK-----EV-LAREDVMAERIRPL--DKQRWAAA-VDPVGG 226 (328)
T ss_dssp HHHHHHHHHHHHTTCC-EEEEESCTTCHHHHHH----TTCS-----EE-EECC---------C--CSCCEEEE-EECSTT
T ss_pred HHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHH----cCCc-----EE-EecCCcHHHHHHHh--cCCcccEE-EECCcH
Confidence 4566777888878885 9999999887777754 4542 21 111121 1222222 23468976 577665
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|.+.+.
T Consensus 227 --~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 227 --RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp --TTHHHHHHTEEEEEEEEEC
T ss_pred --HHHHHHHHhhccCCEEEEE
Confidence 4678899999999998863
No 352
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=85.66 E-value=3.2 Score=36.79 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=44.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+ .++.++..|. .+++...... ...|
T Consensus 14 Gas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id 85 (252)
T 3h7a_A 14 GAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG------GRIVARSLDARNEDEVTAFLNAADAH-APLE 85 (252)
T ss_dssp CCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHHHHH-SCEE
T ss_pred CCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC------CeEEEEECcCCCHHHHHHHHHHHHhh-CCce
Confidence 3566666665543 576 69999999988887777776543 2455666554 3334443333 4689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 86 ~lv~nA 91 (252)
T 3h7a_A 86 VTIFNV 91 (252)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 353
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.55 E-value=1.6 Score=41.32 Aligned_cols=85 Identities=7% Similarity=0.033 Sum_probs=54.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+ +|++.. |++-.+++++ .|.+ .-+.....|..+.+.+.. +..+|+| +|.-|.+
T Consensus 176 ~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~----~vi~~~~~~~~~~v~~~t--~g~~d~v-~d~~g~~ 242 (371)
T 3gqv_A 176 ATATVTMQMLRLSGY-IPIATC-SPHNFDLAKS----RGAE----EVFDYRAPNLAQTIRTYT--KNNLRYA-LDCITNV 242 (371)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS----EEEETTSTTHHHHHHHHT--TTCCCEE-EESSCSH
T ss_pred HHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHH----cCCc----EEEECCCchHHHHHHHHc--cCCccEE-EECCCch
Confidence 467888888888888 576664 7777666654 5542 111112345555555442 2349986 5776653
Q ss_pred HHHHHHHHHhc-ccCCEEEE
Q 019408 83 SSFLRTVFNAV-KRDGLLYL 101 (341)
Q Consensus 83 ~~fld~al~~v-~~gGlL~v 101 (341)
..++.+++++ +++|-+.+
T Consensus 243 -~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 243 -ESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp -HHHHHHHHHSCTTCEEEEE
T ss_pred -HHHHHHHHHhhcCCCEEEE
Confidence 6678899999 68998876
No 354
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=85.27 E-value=10 Score=28.71 Aligned_cols=53 Identities=15% Similarity=0.039 Sum_probs=40.4
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
..+|..+|-++...+.+++-++..+. .+. ...|..+.+.... ...+|+|++|-
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~--~~~~dlvi~d~ 59 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGA------TTV-LAADGVDALELLG--GFTPDLMICDI 59 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESCHHHHHHHHT--TCCCSEEEECC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCc------eEE-EeCCHHHHHHHHh--cCCCCEEEEec
Confidence 45899999999999999999987765 232 3567777666553 34699999995
No 355
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=85.24 E-value=11 Score=28.98 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=39.0
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
..+|..+|-++...+.+++-++..+. .+. ...+..+.+.... ...+|+|++|-
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~--~~~~dlii~d~ 59 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGF------HII-SADSGGQCIDLLK--KGFSGVVLLDI 59 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHH--TCCCEEEEEES
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCe------EEE-EeCCHHHHHHHHH--hcCCCEEEEeC
Confidence 35799999999999999999997765 332 4455555555443 24699999996
No 356
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=85.19 E-value=0.49 Score=43.97 Aligned_cols=63 Identities=17% Similarity=0.116 Sum_probs=46.0
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
|||.|.+++=+-. +|.+-|+++|+++.|+++.+.|.. . +++++|..++-.. .-...|+|.-=|
T Consensus 7 FsG~GG~~~G~~~-aG~~~v~a~e~d~~a~~ty~~N~~---------~--~~~~~DI~~i~~~---~~~~~D~l~ggp 69 (331)
T 3ubt_Y 7 FSGAGGLDLGFQK-AGFRIICANEYDKSIWKTYESNHS---------A--KLIKGDISKISSD---EFPKCDGIIGGP 69 (331)
T ss_dssp SCTTCHHHHHHHH-TTCEEEEEEECCTTTHHHHHHHCC---------S--EEEESCGGGCCGG---GSCCCSEEECCC
T ss_pred CcCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHHCC---------C--CcccCChhhCCHh---hCCcccEEEecC
Confidence 8999987765433 799999999999999999999852 1 3567787654322 123579888777
No 357
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.16 E-value=0.34 Score=45.51 Aligned_cols=78 Identities=21% Similarity=0.284 Sum_probs=55.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+ +|++.|.|++-.+.+++ .+.+ . ++ .|... . .+.+|+|+ |.-|.+
T Consensus 187 ~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~--v~-~~~~~----~---~~~~D~vi-d~~g~~ 245 (348)
T 3two_A 187 GLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVK-----H--FY-TDPKQ----C---KEELDFII-STIPTH 245 (348)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCS-----E--EE-SSGGG----C---CSCEEEEE-ECCCSC
T ss_pred HHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCC-----e--ec-CCHHH----H---hcCCCEEE-ECCCcH
Confidence 457778888887898 79999999988887765 5552 2 22 33211 1 12689774 776754
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
..++.++++++++|-+.+.
T Consensus 246 -~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 246 -YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp -CCHHHHHTTEEEEEEEEEC
T ss_pred -HHHHHHHHHHhcCCEEEEE
Confidence 3678899999999999874
No 358
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.07 E-value=1.3 Score=48.10 Aligned_cols=67 Identities=19% Similarity=0.107 Sum_probs=49.2
Q ss_pred CccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhh------------c
Q 019408 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYL------------K 67 (341)
Q Consensus 1 fagsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~------------~ 67 (341)
|||.|.+++=+-. +|. +.|+++|+++.|+++.+.|.. ...+++.|+..++..... .
T Consensus 547 FaG~GGlslGl~~-AG~~~vv~avEid~~A~~ty~~N~p----------~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~ 615 (1002)
T 3swr_A 547 FSGCGGLSEGFHQ-AGISDTLWAIEMWDPAAQAFRLNNP----------GSTVFTEDCNILLKLVMAGETTNSRGQRLPQ 615 (1002)
T ss_dssp SCTTSHHHHHHHH-HTSEEEEEEECSSHHHHHHHHHHCT----------TSEEECSCHHHHHHHHHHTCSBCTTCCBCCC
T ss_pred ccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhCC----------CCccccccHHHHhhhccchhhhhhhhhhccc
Confidence 8999998776654 687 778999999999999998853 235678999887643110 1
Q ss_pred CCcccEEEeCC
Q 019408 68 REFFDLIDIDS 78 (341)
Q Consensus 68 ~~~fDvIdlDP 78 (341)
...+|+|.-=|
T Consensus 616 ~~~vDll~GGp 626 (1002)
T 3swr_A 616 KGDVEMLCGGP 626 (1002)
T ss_dssp TTTCSEEEECC
T ss_pred CCCeeEEEEcC
Confidence 12578998887
No 359
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.71 E-value=10 Score=33.64 Aligned_cols=70 Identities=14% Similarity=0.075 Sum_probs=42.1
Q ss_pred cccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 3 GCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 3 gsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
|+|..|...+.+ .|+ +|+++|.+++..+.+.+.++. .+- .++.++..|.. +++......-.+.|
T Consensus 16 as~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 89 (265)
T 3lf2_A 16 GSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPG-----ARLFASVCDVLDALQVRAFAEACERTLGCAS 89 (265)
T ss_dssp CSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTT-----CCEEEEECCTTCHHHHHHHHHHHHHHHCSCS
T ss_pred CCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCC-----ceEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 566666655543 576 599999999988887777764 221 23555555543 33333322223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 90 ~lvnnA 95 (265)
T 3lf2_A 90 ILVNNA 95 (265)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 360
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=84.44 E-value=5.6 Score=35.99 Aligned_cols=133 Identities=15% Similarity=0.101 Sum_probs=72.1
Q ss_pred cccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEecc------HHHHHHHhhhcCCcccE
Q 019408 3 GCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFD------ANRVLSECYLKREFFDL 73 (341)
Q Consensus 3 gsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~D------A~~~l~~~~~~~~~fDv 73 (341)
|++..|...+.. .|+ +|+++|.+++..+-..+-++..+. ++..+..| +.+++.+...+-.+-|+
T Consensus 17 as~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 89 (255)
T 4g81_D 17 SARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY------DAHGVAFDVTDELAIEAAFSKLDAEGIHVDI 89 (255)
T ss_dssp CSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC------CEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred CCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC------cEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 444444443332 577 599999999888777776765543 34444444 34445554444446788
Q ss_pred EEeCC-CCCCHHHH----------------------HHHHHhc-c--cCCEEEEEecCCCCCCCCCchhHHhhhccccCC
Q 019408 74 IDIDS-FGSDSSFL----------------------RTVFNAV-K--RDGLLYLTSTDGYSSGGHRPNNSLASYGAYILP 127 (341)
Q Consensus 74 IdlDP-ygsp~~fl----------------------d~al~~v-~--~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~ 127 (341)
++-.- ...+.+|. ..++..+ + .+|-+...++- .+..+....--|+++-
T Consensus 90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~----~~~~~~~~~~~Y~asK-- 163 (255)
T 4g81_D 90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL----TSQAARPTVAPYTAAK-- 163 (255)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG----GGTSBCTTCHHHHHHH--
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh----hhcCCCCCchhHHHHH--
Confidence 86543 11111211 1444444 2 44655544442 2333333344455432
Q ss_pred CCCchhhhHHHHHHHHHHHHHhcCCcE
Q 019408 128 MPYSNEIGLRMLIGGAVREASAQGYHV 154 (341)
Q Consensus 128 ~~~~~E~~lR~ll~~i~~~Aa~~~~~i 154 (341)
-|+.-|-..++.+-+.+|+.+
T Consensus 164 ------aal~~ltr~lA~ela~~gIrV 184 (255)
T 4g81_D 164 ------GGIKMLTCSMAAEWAQFNIQT 184 (255)
T ss_dssp ------HHHHHHHHHHHHHHGGGTEEE
T ss_pred ------HHHHHHHHHHHHHhcccCeEE
Confidence 677888888888877775433
No 361
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=84.34 E-value=1.6 Score=40.56 Aligned_cols=87 Identities=13% Similarity=0.226 Sum_probs=55.5
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe-ccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH-FDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~-~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
|.|...++.++..|+ +|++.|.|++..+.+++. .+.. ..+.... .|..+.+.+.. +..+|+|+ |.-|.
T Consensus 167 ~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~---~g~~----~~~d~~~~~~~~~~~~~~~--~~~~d~vi-~~~g~ 235 (345)
T 2j3h_A 167 AVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTK---FGFD----DAFNYKEESDLTAALKRCF--PNGIDIYF-ENVGG 235 (345)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---SCCS----EEEETTSCSCSHHHHHHHC--TTCEEEEE-ESSCH
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cCCc----eEEecCCHHHHHHHHHHHh--CCCCcEEE-ECCCH
Confidence 455566677776787 799999999888777632 2431 1111111 24444454432 24689874 55453
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|-+.+.
T Consensus 236 --~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 236 --KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp --HHHHHHHTTEEEEEEEEEC
T ss_pred --HHHHHHHHHHhcCCEEEEE
Confidence 6788999999999988864
No 362
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=83.98 E-value=3.5 Score=39.85 Aligned_cols=85 Identities=9% Similarity=0.144 Sum_probs=55.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEec--c------------------HHHHHH
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHF--D------------------ANRVLS 62 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~--D------------------A~~~l~ 62 (341)
|.|...+.+|+..|+ +|++.+.+++..+.+++ .+.+ .+ +... | ..+.+.
T Consensus 232 ~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~----lGa~-----~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (447)
T 4a0s_A 232 GLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA----LGCD-----LV-INRAELGITDDIADDPRRVVETGRKLAKLVV 300 (447)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCC-----CE-EEHHHHTCCTTGGGCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCC-----EE-EecccccccccccccccccchhhhHHHHHHH
Confidence 456667778887787 68888999998888754 4542 21 2111 1 022233
Q ss_pred HhhhcCCcccEEEeCCCCCCHHHHHHHHHhcccCCEEEEEe
Q 019408 63 ECYLKREFFDLIDIDSFGSDSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 63 ~~~~~~~~fDvIdlDPygsp~~fld~al~~v~~gGlL~vt~ 103 (341)
+.. +..+|+| +|.-|. +.++.++++++++|-+.+..
T Consensus 301 ~~~--g~g~Dvv-id~~G~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 301 EKA--GREPDIV-FEHTGR--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHH--SSCCSEE-EECSCH--HHHHHHHHHSCTTCEEEESC
T ss_pred HHh--CCCceEE-EECCCc--hHHHHHHHHHhcCCEEEEEe
Confidence 322 5579987 466554 67889999999999998743
No 363
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=83.82 E-value=1.3 Score=42.01 Aligned_cols=84 Identities=14% Similarity=0.128 Sum_probs=51.1
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+.+|+..|+ +|++.+ +++..+.++ ..+.+ ..+.....|..+.+.+ ...+|+| +|.-|.+
T Consensus 195 ~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa~----~v~~~~~~~~~~~~~~----~~g~D~v-id~~g~~ 259 (375)
T 2vn8_A 195 GVGTFAIQVMKAWDA-HVTAVC-SQDASELVR----KLGAD----DVIDYKSGSVEEQLKS----LKPFDFI-LDNVGGS 259 (375)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTCS----EEEETTSSCHHHHHHT----SCCBSEE-EESSCTT
T ss_pred HHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHH----HcCCC----EEEECCchHHHHHHhh----cCCCCEE-EECCCCh
Confidence 456666777777787 688888 666555553 34542 1111112233333322 2368987 5776765
Q ss_pred HHHHHHHHHhcccCCEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~v 101 (341)
..-++.++++++++|-+..
T Consensus 260 ~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 260 TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp HHHHGGGGBCSSSCCEEEE
T ss_pred hhhhHHHHHhhcCCcEEEE
Confidence 3445788899999998886
No 364
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=83.59 E-value=1.1 Score=42.17 Aligned_cols=83 Identities=20% Similarity=0.239 Sum_probs=54.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCH---HHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGND---AHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~---~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
|.|...+.+|+..|+ +|++.|.++ +-.+.+++ .+. +.+. .. |..+.+.+ . +..+|+| +|.-
T Consensus 191 ~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~----~ga-----~~v~-~~-~~~~~~~~-~--~~~~d~v-id~~ 254 (366)
T 2cdc_A 191 PIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEE----TKT-----NYYN-SS-NGYDKLKD-S--VGKFDVI-IDAT 254 (366)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHH----HTC-----EEEE-CT-TCSHHHHH-H--HCCEEEE-EECC
T ss_pred HHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHH----hCC-----ceec-hH-HHHHHHHH-h--CCCCCEE-EECC
Confidence 457777888887898 899999997 66666653 444 2221 11 22223332 1 1468987 4665
Q ss_pred CCCHHHH-HHHHHhcccCCEEEEE
Q 019408 80 GSDSSFL-RTVFNAVKRDGLLYLT 102 (341)
Q Consensus 80 gsp~~fl-d~al~~v~~gGlL~vt 102 (341)
|.+ ..+ +.+++.++++|.+.+.
T Consensus 255 g~~-~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 255 GAD-VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CCC-THHHHHHGGGEEEEEEEEEC
T ss_pred CCh-HHHHHHHHHHHhcCCEEEEE
Confidence 654 456 8899999999988764
No 365
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.53 E-value=0.29 Score=45.25 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=50.4
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+ +|++.| |++-.+.+++ .+. + .+++ | ..+. +..+|+| +|.-|.
T Consensus 153 ~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~----lGa-----~--~v~~-d----~~~v---~~g~Dvv-~d~~g~- 209 (315)
T 3goh_A 153 AVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAK----RGV-----R--HLYR-E----PSQV---TQKYFAI-FDAVNS- 209 (315)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHH----HTE-----E--EEES-S----GGGC---CSCEEEE-ECC----
T ss_pred HHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHH----cCC-----C--EEEc-C----HHHh---CCCccEE-EECCCc-
Confidence 568888899988898 899999 8888888765 454 1 2333 4 1221 5679976 577665
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.+..++++++++|-+.+.
T Consensus 210 -~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 -QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp -----TTGGGEEEEEEEEEE
T ss_pred -hhHHHHHHHhcCCCEEEEE
Confidence 3347789999999998864
No 366
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.51 E-value=1.8 Score=39.42 Aligned_cols=81 Identities=11% Similarity=0.077 Sum_probs=53.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
|.|...+..|+..|+ +|++.|.+++..+.+++ .+. +.+ +...+..++.... ..+|+|+ | -|.
T Consensus 137 ~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga-----~~~-~~~~~~~~~~~~~----~~~d~vi-d-~g~- 198 (302)
T 1iz0_A 137 ALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGA-----EEA-ATYAEVPERAKAW----GGLDLVL-E-VRG- 198 (302)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTC-----SEE-EEGGGHHHHHHHT----TSEEEEE-E-CSC-
T ss_pred HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCC-----CEE-EECCcchhHHHHh----cCceEEE-E-CCH-
Confidence 445666777777788 79999999888877654 454 221 2222202233322 3689875 4 665
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.+..++++++++|.+.+.
T Consensus 199 -~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 199 -KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -TTHHHHHTTEEEEEEEEEC
T ss_pred -HHHHHHHHhhccCCEEEEE
Confidence 5678899999999988753
No 367
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=83.05 E-value=0.7 Score=42.35 Aligned_cols=54 Identities=11% Similarity=0.203 Sum_probs=42.1
Q ss_pred ccEEEEeccHHHHHHHhhh--cCCcccEEEeCC--CCCCHHHHHHHHHhcccCCEEEE
Q 019408 48 KRWVVTHFDANRVLSECYL--KREFFDLIDIDS--FGSDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 48 ~~~~v~~~DA~~~l~~~~~--~~~~fDvIdlDP--ygsp~~fld~al~~v~~gGlL~v 101 (341)
++++++.+++.+.|..... ...+||+|++|= |.+-...++..+..|++||+|++
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEE
Confidence 5799999999999977532 234799999997 43223467888899999999997
No 368
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=82.98 E-value=11 Score=27.99 Aligned_cols=52 Identities=10% Similarity=0.013 Sum_probs=36.9
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.+++-++..+. .+.....+....+..... ..+|+|++|-
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g~------~vv~~~~~~~~a~~~~~~--~~~dlil~D~ 55 (120)
T 1tmy_A 4 RVLIVDDAAFMRMMLKDIITKAGY------EVAGEATNGREAVEKYKE--LKPDIVTMDI 55 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC------EEEEEESSHHHHHHHHHH--HCCSEEEEEC
T ss_pred eEEEEcCcHHHHHHHHHHHhhcCc------EEEEEECCHHHHHHHHHh--cCCCEEEEeC
Confidence 688999999999999999986655 222234555555544322 3689999996
No 369
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=82.82 E-value=0.47 Score=44.77 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=53.5
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH-HHHHHhhhcCCcccEEEeCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN-RVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~-~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+.|...+.+|+..|+ +|++.|.|++-.+.+++ .+.+ . ++..+.. ++..... ..+|+| +|.-|.
T Consensus 190 ~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~--v~~~~~~~~~~~~~~---~~~D~v-id~~g~ 253 (360)
T 1piw_A 190 GIGSMGTLISKAMGA-ETYVISRSSRKREDAMK----MGAD-----H--YIATLEEGDWGEKYF---DTFDLI-VVCASS 253 (360)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH----HTCS-----E--EEEGGGTSCHHHHSC---SCEEEE-EECCSC
T ss_pred HHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH----cCCC-----E--EEcCcCchHHHHHhh---cCCCEE-EECCCC
Confidence 567788888887788 59999999888887765 4542 2 2221111 2222221 368977 455443
Q ss_pred --CHHHHHHHHHhcccCCEEEEE
Q 019408 82 --DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 --p~~fld~al~~v~~gGlL~vt 102 (341)
+ ..++.++++++++|.+.+.
T Consensus 254 ~~~-~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 254 LTD-IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp STT-CCTTTGGGGEEEEEEEEEC
T ss_pred CcH-HHHHHHHHHhcCCCEEEEe
Confidence 2 4456789999999988863
No 370
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=82.34 E-value=0.89 Score=47.70 Aligned_cols=53 Identities=21% Similarity=0.079 Sum_probs=40.6
Q ss_pred CccccHhHHHHhhhCC------CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHh
Q 019408 1 MCGCGIRSLRYLAEAK------ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSEC 64 (341)
Q Consensus 1 fagsG~rgir~a~e~g------a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~ 64 (341)
|||.|.+++=+-. +| .+-|+++|+|+.|+++.+.|.- ...+++.|+++++...
T Consensus 219 FAG~GGls~Gfe~-AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp----------~~~~~~~di~~i~~~~ 277 (784)
T 4ft4_B 219 YSGCGGMSTGLCL-GAALSGLKLETRWAVDFNSFACQSLKYNHP----------QTEVRNEKADEFLALL 277 (784)
T ss_dssp TCTTSHHHHHHHH-HHHHHTEEEEEEEEEESCHHHHHHHHHHCT----------TSEEEESCHHHHHHHH
T ss_pred CcCccHHHHHHHH-hCcccCCceeEEEEEeCCHHHHHHHHHHCC----------CCceecCcHHHhhhhh
Confidence 8999998765543 23 4678999999999999999864 2356789998887543
No 371
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.04 E-value=17 Score=32.18 Aligned_cols=71 Identities=11% Similarity=0.031 Sum_probs=43.3
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|+|..|...+.+ .|+ +|++.|.+++..+.+.+.++..+- .++.++..|.. +++.+....-...|
T Consensus 17 Gas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 17 GGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGS-----GKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSS-----SCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC-----CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3666667665543 576 699999999988877777764431 24556666643 23333222223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 91 ~lvnnA 96 (262)
T 3pk0_A 91 VVCANA 96 (262)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 372
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.75 E-value=19 Score=31.62 Aligned_cols=70 Identities=7% Similarity=-0.061 Sum_probs=44.3
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|.. +++........+.|
T Consensus 36 Gas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 108 (262)
T 3rkr_A 36 GASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGG------EAESHACDLSHSDAIAAFATGVLAAHGRCD 108 (262)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC------EEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCC------ceeEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 4677777666554 576 599999999988888777765432 4556666643 23333222223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+.-.
T Consensus 109 ~lv~~A 114 (262)
T 3rkr_A 109 VLVNNA 114 (262)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 373
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=81.63 E-value=1.3 Score=42.02 Aligned_cols=84 Identities=13% Similarity=-0.052 Sum_probs=58.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-CC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-FG 80 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-yg 80 (341)
+|+|..++..++.....+++.+|+ +..++..+++ .++++..+|+++- . +.. |+|++-- +.
T Consensus 212 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~~---~---p~~-D~v~~~~vlh 272 (368)
T 3reo_A 212 GGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----------SGVEHLGGDMFDG---V---PKG-DAIFIKWICH 272 (368)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTTC---C---CCC-SEEEEESCGG
T ss_pred CCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----------CCCEEEecCCCCC---C---CCC-CEEEEechhh
Confidence 699999999988633347899999 8777655431 2578889998741 1 122 9887643 11
Q ss_pred -CC----HHHHHHHHHhcccCCEEEEEec
Q 019408 81 -SD----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 81 -sp----~~fld~al~~v~~gGlL~vt~T 104 (341)
.+ ..++..+.++|++||.|.+...
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 11 2467788889999999988554
No 374
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=81.57 E-value=1.1 Score=42.03 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=57.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS--- 78 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP--- 78 (341)
+|+|..+...+....-.+++.+|+ +..++.+++ . ..+++..+|+++ . . + .||+|++--
T Consensus 202 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-----~~v~~~~~d~~~---~--~-~-~~D~v~~~~vlh 262 (358)
T 1zg3_A 202 GGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-----ENLNFVGGDMFK---S--I-P-SADAVLLKWVLH 262 (358)
T ss_dssp CTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-----SSEEEEECCTTT---C--C-C-CCSEEEEESCGG
T ss_pred CCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-----CCcEEEeCccCC---C--C-C-CceEEEEccccc
Confidence 689999999987532347899999 676654442 2 237788999874 1 1 2 499887743
Q ss_pred -CCCCH--HHHHHHHHhccc---CCEEEEEe
Q 019408 79 -FGSDS--SFLRTVFNAVKR---DGLLYLTS 103 (341)
Q Consensus 79 -ygsp~--~fld~al~~v~~---gGlL~vt~ 103 (341)
+..+. .++..+.++|++ ||.|.+..
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 22222 667788889999 99888754
No 375
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=81.16 E-value=11 Score=29.13 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=39.0
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+..+. ...+|+|++|-
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~--~~~~dlvi~d~ 56 (142)
T 2qxy_A 5 PTVMVVDESRITFLAVKNALEKDGF------NVI-WAKNEQEAFTFLR--REKIDLVFVDV 56 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHGGGTC------EEE-EESSHHHHHHHHT--TSCCSEEEEEC
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCC------EEE-EECCHHHHHHHHh--ccCCCEEEEeC
Confidence 4689999999999999999887665 333 4556666665543 24799999997
No 376
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=80.76 E-value=14 Score=30.31 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=49.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---CCCCHHHHHHHHHhcc
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS---FGSDSSFLRTVFNAVK 94 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP---ygsp~~fld~al~~v~ 94 (341)
.+|..+|-++...+.++.-++..+. .+ ....|..+.+.... ...||+|++|- =.....++...-+.-.
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~------~v-~~~~~~~~al~~~~--~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~ 78 (184)
T 3rqi_A 8 KNFLVIDDNEVFAGTLARGLERRGY------AV-RQAHNKDEALKLAG--AEKFEFITVXLHLGNDSGLSLIAPLCDLQP 78 (184)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EE-EEECSHHHHHHHHT--TSCCSEEEECSEETTEESHHHHHHHHHHCT
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCC------EE-EEeCCHHHHHHHHh--hCCCCEEEEeccCCCccHHHHHHHHHhcCC
Confidence 4799999999999999999987665 33 34567777766553 34699999995 2222344443322222
Q ss_pred cCCEEEEEec
Q 019408 95 RDGLLYLTST 104 (341)
Q Consensus 95 ~gGlL~vt~T 104 (341)
.--++.+|+.
T Consensus 79 ~~~ii~lt~~ 88 (184)
T 3rqi_A 79 DARILVLTGY 88 (184)
T ss_dssp TCEEEEEESS
T ss_pred CCCEEEEeCC
Confidence 2335556553
No 377
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=80.74 E-value=17 Score=27.76 Aligned_cols=79 Identities=9% Similarity=-0.037 Sum_probs=48.9
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C---CCCHHHHHHHHHh
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F---GSDSSFLRTVFNA 92 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y---gsp~~fld~al~~ 92 (341)
..+|..+|-++...+.+++-++..++ .+.....+..+.+..... ..+|+|++|- . .....++...-+.
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~------~v~~~~~~~~~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~l~~~ 80 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGY------DVLGVFDNGEEAVRCAPD--LRPDIALVDIMLCGALDGVETAARLAAG 80 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTC------EEEEEESSHHHHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCC------eeEEEECCHHHHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHHHHhC
Confidence 45799999999999999999997766 233234555555544432 3699999995 2 1222344332222
Q ss_pred cccCCEEEEEec
Q 019408 93 VKRDGLLYLTST 104 (341)
Q Consensus 93 v~~gGlL~vt~T 104 (341)
..--++.+|..
T Consensus 81 -~~~~ii~ls~~ 91 (140)
T 3cg0_A 81 -CNLPIIFITSS 91 (140)
T ss_dssp -SCCCEEEEECC
T ss_pred -CCCCEEEEecC
Confidence 34456666543
No 378
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=80.63 E-value=18 Score=28.33 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=38.7
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
-+|..+|-++...+.+++-++..+- ........|..+.+..+. ...+|+|++|-
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~-----~~~v~~~~~~~~al~~l~--~~~~dlii~D~ 74 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPD-----VESVLQAKNGQEAIQLLE--KESVDIAILDV 74 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTT-----EEEEEEESSHHHHHHHHT--TSCCSEEEECS
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCC-----cEEEEEECCHHHHHHHhh--ccCCCEEEEeC
Confidence 4799999999999999998885531 112234566666666543 34699999996
No 379
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=80.56 E-value=0.54 Score=44.12 Aligned_cols=54 Identities=9% Similarity=-0.140 Sum_probs=43.3
Q ss_pred CccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHH
Q 019408 1 MCGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLS 62 (341)
Q Consensus 1 fagsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~ 62 (341)
|+|||.-++.+.. .| .+.+.+|+++.++++++++++..+. ....++.|+.+++.
T Consensus 260 F~GsGtt~~aa~~-~g-r~~ig~e~~~~~~~~~~~r~~~~~~------~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 260 FGGSNTTGLVAER-ES-RKWISFEMKPEYVAASAFRFLDNNI------SEEKITDIYNRILN 313 (323)
T ss_dssp TCTTCHHHHHHHH-TT-CEEEEEESCHHHHHHHHGGGSCSCS------CHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHH-cC-CCEEEEeCCHHHHHHHHHHHHhccc------chHHHHHHHHHHHc
Confidence 8999999999887 46 5688999999999999999885544 23456788887754
No 380
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=80.51 E-value=14 Score=28.91 Aligned_cols=55 Identities=16% Similarity=0.036 Sum_probs=39.2
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
-.+|..+|-++...+.+++-++..+. ..+.....|..+.+..... ..+|+|++|-
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~-----~~~v~~~~~~~~a~~~l~~--~~~dlii~d~ 69 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGS-----VNVVGEADDGAAALELIKA--HLPDVALLDY 69 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSS-----EEEEEEESSHHHHHHHHHH--HCCSEEEEET
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCC-----eEEEEEeCCHHHHHHHHHh--cCCCEEEEeC
Confidence 46799999999999999999987653 1222245566666654432 3699999996
No 381
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=80.50 E-value=25 Score=29.65 Aligned_cols=79 Identities=15% Similarity=0.065 Sum_probs=49.2
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC--C-CCHHHHHHHHHhc-
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF--G-SDSSFLRTVFNAV- 93 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy--g-sp~~fld~al~~v- 93 (341)
-+|..+|-++...+.++.-++..+. .+. ...|..+.+..... ..+|+|++|-- + ....++. .++..
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~~~~--~~~dlvllD~~l~~~~g~~~~~-~l~~~~ 77 (233)
T 1ys7_A 8 PRVLVVDDDSDVLASLERGLRLSGF------EVA-TAVDGAEALRSATE--NRPDAIVLDINMPVLDGVSVVT-ALRAMD 77 (233)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--SCCSEEEEESSCSSSCHHHHHH-HHHHTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCC------EEE-EECCHHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHH-HHHhcC
Confidence 4699999999999999999987655 332 45566666654432 46999999962 2 1123332 23322
Q ss_pred ccCCEEEEEecCC
Q 019408 94 KRDGLLYLTSTDG 106 (341)
Q Consensus 94 ~~gGlL~vt~TD~ 106 (341)
..-.++.+|+.+.
T Consensus 78 ~~~~ii~lt~~~~ 90 (233)
T 1ys7_A 78 NDVPVCVLSARSS 90 (233)
T ss_dssp CCCCEEEEECCCT
T ss_pred CCCCEEEEEcCCC
Confidence 2335677766543
No 382
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=80.44 E-value=2.7 Score=46.90 Aligned_cols=67 Identities=18% Similarity=0.098 Sum_probs=49.6
Q ss_pred CccccHhHHHHhhhCCC-CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhh------------c
Q 019408 1 MCGCGIRSLRYLAEAKA-DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYL------------K 67 (341)
Q Consensus 1 fagsG~rgir~a~e~ga-~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~------------~ 67 (341)
|||.|.+++=+-. +|. +.|+++|+++.|+++.+.|.. ...+++.|+..++..... .
T Consensus 858 FsG~GGlslGfe~-AG~~~vv~avEid~~A~~ty~~N~p----------~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 858 FSGCGGLSEGFHQ-AGISETLWAIEMWDPAAQAFRLNNP----------GTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp TCTTSHHHHHHHH-TTSEEEEEEECCSHHHHHHHHHHCT----------TSEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred ccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhCC----------CCcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 8999998876654 786 678999999999999999852 234678999988754210 0
Q ss_pred CCcccEEEeCC
Q 019408 68 REFFDLIDIDS 78 (341)
Q Consensus 68 ~~~fDvIdlDP 78 (341)
...+|+|.--|
T Consensus 927 ~~~vDvl~GGp 937 (1330)
T 3av4_A 927 KGDVEMLCGGP 937 (1330)
T ss_dssp TTTCSEEEECC
T ss_pred cCccceEEecC
Confidence 12478888877
No 383
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=80.36 E-value=10 Score=28.62 Aligned_cols=52 Identities=12% Similarity=0.017 Sum_probs=38.2
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+..... ..+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~--~~~dlii~D~ 55 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEMLGF------QAD-YVMSGTDALHAMST--RGYDAVFIDL 55 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTE------EEE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred ceEEEEcCCHHHHHHHHHHHHHcCC------CEE-EECCHHHHHHHHHh--cCCCEEEEeC
Confidence 3689999999999999999987764 232 34566666554432 4699999996
No 384
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=79.98 E-value=1.3 Score=42.25 Aligned_cols=80 Identities=6% Similarity=-0.035 Sum_probs=49.1
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|..++.+|+..|+ +|++.|.|++-.+.+++ .+.+ .-+.....|..+.+.+.. .+..+|+| +|.-|.+
T Consensus 183 ~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~----~~~~~~~~~~~~~v~~~t-~~~g~d~v-~d~~g~~ 251 (379)
T 3iup_A 183 NLGQMLNQICLKDGI-KLVNIVRKQEQADLLKA----QGAV----HVCNAASPTFMQDLTEAL-VSTGATIA-FDATGGG 251 (379)
T ss_dssp HHHHHHHHHHHHHTC-CEEEEESSHHHHHHHHH----TTCS----CEEETTSTTHHHHHHHHH-HHHCCCEE-EESCEEE
T ss_pred HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHh----CCCc----EEEeCCChHHHHHHHHHh-cCCCceEE-EECCCch
Confidence 345666777887798 59999999999888875 5552 112212344444444432 23468976 5776643
Q ss_pred HHHHHHHHHhcc
Q 019408 83 SSFLRTVFNAVK 94 (341)
Q Consensus 83 ~~fld~al~~v~ 94 (341)
..++.++++++
T Consensus 252 -~~~~~~~~~l~ 262 (379)
T 3iup_A 252 -KLGGQILTCME 262 (379)
T ss_dssp -SHHHHHHHHHH
T ss_pred -hhHHHHHHhcc
Confidence 45566666664
No 385
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=79.84 E-value=13 Score=28.24 Aligned_cols=49 Identities=14% Similarity=-0.031 Sum_probs=35.3
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe---ccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH---FDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~---~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.+++-++..+. .+.... .+|.+.+.. ..+|+|++|-
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~------~v~~~~~~~~~a~~~~~~-----~~~dlii~d~ 54 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI------EILAELTEGGSAVQRVET-----LKPDIVIIDV 54 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE------EEEEEESSSTTHHHHHHH-----HCCSEEEEET
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc------EEEEEcCCHHHHHHHHHh-----cCCCEEEEec
Confidence 588999999999999999987664 222122 445555543 3699999996
No 386
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=79.84 E-value=12 Score=28.83 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=38.3
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhh---cCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYL---KREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~---~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++.-++..+. ........+..+.+..+.. .+..||+|++|-
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~~~-----~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~ 68 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMTHR-----VEEIQSVTSGNAAINKLNELYAAGRWPSIICIDI 68 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCC-----EEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCC-----CeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcC
Confidence 4799999999999999998886654 1112334555555544322 225799999996
No 387
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=79.73 E-value=3 Score=40.62 Aligned_cols=85 Identities=9% Similarity=0.108 Sum_probs=55.3
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEe--cc--------------H---HHHHHH
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTH--FD--------------A---NRVLSE 63 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~--~D--------------A---~~~l~~ 63 (341)
+.|..++.+|+..|+ +|++++.+++-.+.+++ .|.+ .+ +.. .| . .+.+.+
T Consensus 240 ~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~----lGa~-----~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 308 (456)
T 3krt_A 240 GLGSYATQFALAGGA-NPICVVSSPQKAEICRA----MGAE-----AI-IDRNAEGYRFWKDENTQDPKEWKRFGKRIRE 308 (456)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCC-----EE-EETTTTTCCSEEETTEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHh----hCCc-----EE-EecCcCcccccccccccchHHHHHHHHHHHH
Confidence 456777788887788 67888889998888865 4442 11 111 11 1 122332
Q ss_pred hhhcCCcccEEEeCCCCCCHHHHHHHHHhcccCCEEEEE
Q 019408 64 CYLKREFFDLIDIDSFGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 64 ~~~~~~~fDvIdlDPygsp~~fld~al~~v~~gGlL~vt 102 (341)
. ..+..+|+| +|.-|. +.++.++++++++|.+.+.
T Consensus 309 ~-t~g~g~Dvv-id~~G~--~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 309 L-TGGEDIDIV-FEHPGR--ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp H-HTSCCEEEE-EECSCH--HHHHHHHHHEEEEEEEEES
T ss_pred H-hCCCCCcEE-EEcCCc--hhHHHHHHHhhCCcEEEEE
Confidence 2 224579976 566554 7788999999999999873
No 388
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=79.51 E-value=12 Score=34.20 Aligned_cols=109 Identities=18% Similarity=0.103 Sum_probs=69.1
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHH--HHHHHHHHcCCCCCCCccEEEEec-cHHHHHHHhhhcCCcccEEEeC-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRR--VILGNLKSIERGSGDEKRWVVTHF-DANRVLSECYLKREFFDLIDID- 77 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~--~i~~N~~~n~~~~~~~~~~~v~~~-DA~~~l~~~~~~~~~fDvIdlD- 77 (341)
|+.|..+-.++.+.|+.+|+++|+-..-.+ .+. +..|- +.+++.++ |++. ....++|.|..|
T Consensus 87 aapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~---~s~gw-----n~v~fk~gvDv~~------~~~~~~DtllcDI 152 (267)
T 3p8z_A 87 CGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPM---STYGW-----NIVKLMSGKDVFY------LPPEKCDTLLCDI 152 (267)
T ss_dssp CTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCC---CCTTT-----TSEEEECSCCGGG------CCCCCCSEEEECC
T ss_pred CCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchh---hhcCc-----CceEEEeccceee------cCCccccEEEEec
Confidence 688999998888889999999999654221 000 01111 24667777 8732 234689999777
Q ss_pred -CCCCCHHHHHH-----HH----HhcccCCEEEEEecCCCCCCCCCchh------HHhhhccccCCCCCc
Q 019408 78 -SFGSDSSFLRT-----VF----NAVKRDGLLYLTSTDGYSSGGHRPNN------SLASYGAYILPMPYS 131 (341)
Q Consensus 78 -Pygsp~~fld~-----al----~~v~~gGlL~vt~TD~~~l~g~~~~~------~~r~Yg~~~~~~~~~ 131 (341)
| .+|.+.+|+ +| +.+++ |-.|+ -+||+..|+. ..++||..-.+.|++
T Consensus 153 ge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~-----KVl~py~p~v~e~l~~lq~~fgg~lVR~P~S 215 (267)
T 3p8z_A 153 GE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCI-----KVLNPYMPTVIEHLERLQRKHGGMLVRNPLS 215 (267)
T ss_dssp CC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE-----EESCCCSHHHHHHHHHHHHHHCCEEECCTTS
T ss_pred CC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEE-----EEccCCChhHHHHHHHHHHHhCCEeEeCCCC
Confidence 6 777788774 23 34566 55554 3578887655 356688765444443
No 389
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.27 E-value=10 Score=33.42 Aligned_cols=70 Identities=7% Similarity=0.003 Sum_probs=43.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|.. +++.+....-.+.|
T Consensus 19 Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 91 (256)
T 3gaf_A 19 GAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGG------KAIGLECNVTDEQHREAVIKAALDQFGKIT 91 (256)
T ss_dssp SCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------cEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3667677665543 476 499999999888887777765432 4555555543 33333322223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 92 ~lv~nA 97 (256)
T 3gaf_A 92 VLVNNA 97 (256)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 390
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=79.27 E-value=18 Score=27.74 Aligned_cols=54 Identities=20% Similarity=0.144 Sum_probs=36.1
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEecc---HHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFD---ANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~D---A~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.++.-++..+.. .+. ...| |...+......+..||+|++|-
T Consensus 4 ~ILivdD~~~~~~~l~~~L~~~g~~-----~v~-~~~~~~~al~~~~~~~~~~~~~dlvllD~ 60 (133)
T 2r25_B 4 KILVVEDNHVNQEVIKRMLNLEGIE-----NIE-LACDGQEAFDKVKELTSKGENYNMIFMDV 60 (133)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC-----CEE-EESSHHHHHHHHHHHHHHTCCCSEEEECS
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCc-----eEE-EECCHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 5889999999999999999876541 222 3444 4444433222234799999995
No 391
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=79.26 E-value=1.4 Score=41.85 Aligned_cols=84 Identities=14% Similarity=0.008 Sum_probs=57.5
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC-C-
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS-F- 79 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP-y- 79 (341)
+|+|..++..++...-.+++.+|+ +..++.++++ .++++..+|+++ .. +.. |+|++-= .
T Consensus 210 ~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~D~~~---~~---p~~-D~v~~~~vlh 270 (364)
T 3p9c_A 210 GGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----------PGVTHVGGDMFK---EV---PSG-DTILMKWILH 270 (364)
T ss_dssp CTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT---CC---CCC-SEEEEESCGG
T ss_pred CCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----------CCeEEEeCCcCC---CC---CCC-CEEEehHHhc
Confidence 699999999988633347899999 7766554421 357888999874 11 122 9887643 1
Q ss_pred CCC----HHHHHHHHHhcccCCEEEEEec
Q 019408 80 GSD----SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gsp----~~fld~al~~v~~gGlL~vt~T 104 (341)
..+ ..++..+.++|++||.|.+...
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 112 2557778889999999988543
No 392
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=79.20 E-value=2.8 Score=39.27 Aligned_cols=87 Identities=8% Similarity=0.065 Sum_probs=48.5
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHH----HHHHHHHHHHcCCCCCCCccEEEEe----ccHHHHHHHhhh-cCCcccE
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAH----RRVILGNLKSIERGSGDEKRWVVTH----FDANRVLSECYL-KREFFDL 73 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A----~~~i~~N~~~n~~~~~~~~~~~v~~----~DA~~~l~~~~~-~~~~fDv 73 (341)
+.|...+.+|+..|++ |++...+++. .+.+ +..|.+ .+.-.. .|..+.+.+... .+..+|+
T Consensus 179 ~vG~~aiqlak~~Ga~-vi~~~~~~~~~~~~~~~~----~~lGa~-----~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dv 248 (364)
T 1gu7_A 179 AVGKYASQIGKLLNFN-SISVIRDRPNLDEVVASL----KELGAT-----QVITEDQNNSREFGPTIKEWIKQSGGEAKL 248 (364)
T ss_dssp HHHHHHHHHHHHHTCE-EEEEECCCTTHHHHHHHH----HHHTCS-----EEEEHHHHHCGGGHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHCCCE-EEEEecCccccHHHHHHH----HhcCCe-----EEEecCccchHHHHHHHHHHhhccCCCceE
Confidence 4566778888877885 5555444332 3333 235552 221111 233334443320 2346898
Q ss_pred EEeCCCCCCHHHHHHHHHhcccCCEEEEE
Q 019408 74 IDIDSFGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 74 IdlDPygsp~~fld~al~~v~~gGlL~vt 102 (341)
| +|.-|. +....++++++++|.+.+.
T Consensus 249 v-id~~G~--~~~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 249 A-LNCVGG--KSSTGIARKLNNNGLMLTY 274 (364)
T ss_dssp E-EESSCH--HHHHHHHHTSCTTCEEEEC
T ss_pred E-EECCCc--hhHHHHHHHhccCCEEEEe
Confidence 7 476564 3334789999999998863
No 393
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=79.10 E-value=16 Score=32.65 Aligned_cols=70 Identities=9% Similarity=0.022 Sum_probs=43.1
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|+|..|...+.+ .|+ +|+++|.+++..+.+.+.++..+. ++.++..|. .+++.+......+.|
T Consensus 33 Gas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 33 GSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGH------DAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC------CEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------ceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 3566666655543 576 699999999888877777765432 345555543 333333333334689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 106 ~lv~nA 111 (271)
T 4ibo_A 106 ILVNNA 111 (271)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 394
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.03 E-value=17 Score=31.38 Aligned_cols=71 Identities=8% Similarity=-0.041 Sum_probs=42.6
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH--------HHHHHHhhhcCCc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA--------NRVLSECYLKREF 70 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA--------~~~l~~~~~~~~~ 70 (341)
.|||..|...+++ .|+ +|++.|.+++..+.+.+.++..+. ....++..|. .+++......-..
T Consensus 21 Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~ 94 (247)
T 3i1j_A 21 GAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQ-----PQPLIIALNLENATAQQYRELAARVEHEFGR 94 (247)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTS-----CCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCC-----CCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence 4677777665543 576 599999999988888877775542 1223333332 3333333222236
Q ss_pred ccEEEeCC
Q 019408 71 FDLIDIDS 78 (341)
Q Consensus 71 fDvIdlDP 78 (341)
.|+++.-.
T Consensus 95 id~lv~nA 102 (247)
T 3i1j_A 95 LDGLLHNA 102 (247)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89887665
No 395
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=78.89 E-value=17 Score=26.74 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=37.9
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.+++.++..+. .+. ...+..+.+..... ..+|+|++|-
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~------~v~-~~~~~~~a~~~~~~--~~~dlvl~D~ 53 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGY------EID-TAENGEEALKKFFS--GNYDLVILDI 53 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--SCCSEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCC------EEE-EeCCHHHHHHHHhc--CCCCEEEEEC
Confidence 688999999999999999987665 333 45566666654432 3699999996
No 396
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=78.79 E-value=16 Score=32.81 Aligned_cols=71 Identities=10% Similarity=-0.015 Sum_probs=41.2
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeC-CHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDG-NDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Di-s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~f 71 (341)
.|||..|...+.+ .|+ +|+++|. +++..+.+.+.++...- .++.++..|. .+++.+....-...
T Consensus 32 Gas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 32 GSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSS-----GTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCS-----SCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccC-----CcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 3566667665543 576 6889998 67777766666653211 2455555554 33333333333367
Q ss_pred cEEEeCC
Q 019408 72 DLIDIDS 78 (341)
Q Consensus 72 DvIdlDP 78 (341)
|+++.-.
T Consensus 106 D~lv~nA 112 (281)
T 3v2h_A 106 DILVNNA 112 (281)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9887654
No 397
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=78.70 E-value=1.4 Score=41.46 Aligned_cols=85 Identities=21% Similarity=0.266 Sum_probs=55.0
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
++.|...+.+|+..|+ +|++.|.+++-.+.+++ ..+.+ .+ +...|. +.+.+.. ..+|+| +|.-|.
T Consensus 190 G~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~---~lGa~-----~v-i~~~~~-~~~~~~~---~g~D~v-id~~g~ 254 (357)
T 2cf5_A 190 GGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ---DLGAD-----DY-VIGSDQ-AKMSELA---DSLDYV-IDTVPV 254 (357)
T ss_dssp SHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT---TSCCS-----CE-EETTCH-HHHHHST---TTEEEE-EECCCS
T ss_pred CHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH---HcCCc-----ee-eccccH-HHHHHhc---CCCCEE-EECCCC
Confidence 3567778888887788 79999999887766652 24442 22 222332 2333321 268976 577554
Q ss_pred CHHHHHHHHHhcccCCEEEEE
Q 019408 82 DSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt 102 (341)
+ ..++.++++++++|-+.+.
T Consensus 255 ~-~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 255 H-HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp C-CCSHHHHTTEEEEEEEEEC
T ss_pred h-HHHHHHHHHhccCCEEEEe
Confidence 3 3467789999999998864
No 398
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=78.29 E-value=18 Score=28.38 Aligned_cols=53 Identities=15% Similarity=0.024 Sum_probs=37.7
Q ss_pred CEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++. .+. .+.....+..+.+.... ...+|+|++|-
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~~~------~v~~~~~~~~~a~~~l~--~~~~dlii~D~ 59 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIERRPGY------AVVAEAADAGEAYRLYR--ETTPDIVVMDL 59 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTSTTE------EEEEEESSHHHHHHHHH--TTCCSEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHhhCCCc------EEEEEeCCHHHHHHHHh--cCCCCEEEEec
Confidence 4689999999999999998875 333 22224566666665543 24699999996
No 399
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=78.27 E-value=14 Score=32.59 Aligned_cols=67 Identities=16% Similarity=0.078 Sum_probs=38.9
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.+. .++.++..|.. +++......-...|
T Consensus 15 Gas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 15 GGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG---------PRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3566666665543 576 69999999988777666542 23444554432 23332222223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 85 ~lv~nA 90 (255)
T 4eso_A 85 LLHINA 90 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 400
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.16 E-value=17 Score=32.91 Aligned_cols=70 Identities=14% Similarity=0.050 Sum_probs=44.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|.. +++.+........|
T Consensus 38 Gas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 38 GGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGF------DAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC------ceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 4677777766554 575 599999999988888777765443 4455555543 23333222223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+--.
T Consensus 111 ~lvnnA 116 (301)
T 3tjr_A 111 VVFSNA 116 (301)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887665
No 401
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=78.14 E-value=19 Score=32.93 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=45.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHH------HHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANR------VLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~------~l~~~~~~~~~fD 72 (341)
.|||..|...+++ .|+ +|++.|.+++..+-+.+.++..+.. .++.++..|..+ ++..........|
T Consensus 15 Gas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 89 (319)
T 3ioy_A 15 GGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSG----PEVMGVQLDVASREGFKMAADEVEARFGPVS 89 (319)
T ss_dssp TTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred CCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCC----CeEEEEECCCCCHHHHHHHHHHHHHhCCCCC
Confidence 3667777666554 576 5999999999888887777654431 245666665432 3333322223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+.-.
T Consensus 90 ~lv~nA 95 (319)
T 3ioy_A 90 ILCNNA 95 (319)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887765
No 402
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=77.98 E-value=22 Score=27.44 Aligned_cols=54 Identities=17% Similarity=0.110 Sum_probs=40.1
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+.. .......|..+.+.... ...+|+|++|.
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~~~-----~~v~~~~~~~~a~~~l~--~~~~dlii~D~ 59 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRKDIH-----CQLEFVDNGAKALYQVQ--QAKYDLIILDI 59 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTCC-----EEEEEESSHHHHHHHHT--TCCCSEEEECT
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCC-----eeEEEECCHHHHHHHhh--cCCCCEEEEeC
Confidence 46899999999999999999877652 12234566666666543 34799999997
No 403
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=77.71 E-value=21 Score=27.15 Aligned_cols=54 Identities=20% Similarity=0.094 Sum_probs=38.5
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
..+|..+|-++...+.+++-++..+. .+. ...+..+.+..... ...+|+|++|-
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~~~~-~~~~dlvi~D~ 60 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGI------DAV-GADGAEEARLYLHY-QKRIGLMITDL 60 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC------CEE-EESSHHHHHHHHHH-CTTEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCc------eEE-EeCCHHHHHHHHHh-CCCCcEEEEec
Confidence 35799999999999999999988776 232 34455555544322 23499999996
No 404
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=77.53 E-value=21 Score=27.14 Aligned_cols=52 Identities=17% Similarity=0.033 Sum_probs=38.3
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++.-++..+. .+. ...+..+.+..... ..+|+|++|-
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~al~~~~~--~~~dlvl~D~ 55 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEFEGY------EVE-IAATAGEGLAKIEN--EFFNLALFXI 55 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--SCCSEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHHHHHCCc------eEE-EeCCHHHHHHHHhc--CCCCEEEEec
Confidence 4689999999999999999986654 333 45566666654432 4689999996
No 405
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=77.25 E-value=18 Score=28.35 Aligned_cols=52 Identities=15% Similarity=0.036 Sum_probs=39.0
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+.... ...+|+|++|-
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~--~~~~dlvi~d~ 59 (154)
T 2rjn_A 8 YTVMLVDDEQPILNSLKRLIKRLGC------NII-TFTSPLDALEALK--GTSVQLVISDM 59 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTC------EEE-EESCHHHHHHHHT--TSCCSEEEEES
T ss_pred CeEEEEcCCHHHHHHHHHHHHHcCC------eEE-EeCCHHHHHHHHh--cCCCCEEEEec
Confidence 4799999999999999999987655 333 4556666665543 24699999996
No 406
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=77.12 E-value=22 Score=31.28 Aligned_cols=70 Identities=4% Similarity=-0.028 Sum_probs=40.8
Q ss_pred ccccHhHHHHhhh---CCCCEEEEe-eCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMAN-DGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~-Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~f 71 (341)
.|+|..|...+.+ .|+. |++. +.+++..+.+.+-++..+ .++.++..|.. +++......-.+.
T Consensus 11 Gas~gIG~aia~~l~~~G~~-vv~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 11 GSSRGVGKAAAIRLAENGYN-IVINYARSKKAALETAEEIEKLG------VKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp SCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHTTT------CCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3667777665543 5765 5554 889888777777665433 24555665533 3333332222357
Q ss_pred cEEEeCC
Q 019408 72 DLIDIDS 78 (341)
Q Consensus 72 DvIdlDP 78 (341)
|+++.-.
T Consensus 84 d~lv~nA 90 (258)
T 3oid_A 84 DVFVNNA 90 (258)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9887654
No 407
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=76.99 E-value=17 Score=27.80 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=39.5
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
..+|..+|-++...+.+++-++..+. .+ ....|+.+.+..... ..||+|++|-
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~------~v-~~~~~~~~a~~~l~~--~~~dlvi~d~ 58 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGF------DS-DMVHSAAQALEQVAR--RPYAAMTVDL 58 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTC------EE-EEECSHHHHHHHHHH--SCCSEEEECS
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCC------eE-EEECCHHHHHHHHHh--CCCCEEEEeC
Confidence 35799999999999999999987765 23 344566666654432 4699999996
No 408
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=76.91 E-value=20 Score=28.12 Aligned_cols=78 Identities=14% Similarity=0.149 Sum_probs=49.0
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC--C-CCHHHHHHHHHhcc
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF--G-SDSSFLRTVFNAVK 94 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy--g-sp~~fld~al~~v~ 94 (341)
.+|..+|-++...+.+++-++..+. .+. ...+....+.... ...+|+|++|-. + ....++...-+.-.
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~--~~~~dliild~~l~~~~g~~~~~~l~~~~~ 74 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGF------TVS-SFASATEALAGLS--ADFAGIVISDIRMPGMDGLALFRKILALDP 74 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESCHHHHHHTCC--TTCCSEEEEESCCSSSCHHHHHHHHHHHCT
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCc------EEE-EECCHHHHHHHHH--hCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 4689999999999999999987665 333 4566666665543 346999999962 2 12233433222222
Q ss_pred cCCEEEEEec
Q 019408 95 RDGLLYLTST 104 (341)
Q Consensus 95 ~gGlL~vt~T 104 (341)
.--++.+|..
T Consensus 75 ~~pii~ls~~ 84 (155)
T 1qkk_A 75 DLPMILVTGH 84 (155)
T ss_dssp TSCEEEEECG
T ss_pred CCCEEEEECC
Confidence 3346666543
No 409
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=76.73 E-value=39 Score=29.76 Aligned_cols=133 Identities=11% Similarity=0.130 Sum_probs=69.2
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeC-CHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDG-NDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Di-s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~f 71 (341)
.|+|..|...+.+ .|+ +|++.|. +++..+.+.+.++..+. ++.++..|.. +++.+....-.+.
T Consensus 25 Gas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 25 GSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGS------DAIAIKADIRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp CTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC------CEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC------cEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3566666555443 576 4666655 56666666666665442 4555665543 3333332222357
Q ss_pred cEEEeCC-C---CC-----CHHH--------------HHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCC
Q 019408 72 DLIDIDS-F---GS-----DSSF--------------LRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPM 128 (341)
Q Consensus 72 DvIdlDP-y---gs-----p~~f--------------ld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~ 128 (341)
|+++--. . +. +..+ +..++..++++|-+..+++..+... +.....-|+++-
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~~Y~asK--- 171 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF---SVPKHSLYSGSK--- 171 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC---CCTTCHHHHHHH---
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC---CCCCCchhHHHH---
Confidence 9887654 1 11 1111 1255566777777766666332211 222233354432
Q ss_pred CCchhhhHHHHHHHHHHHHHhcCC
Q 019408 129 PYSNEIGLRMLIGGAVREASAQGY 152 (341)
Q Consensus 129 ~~~~E~~lR~ll~~i~~~Aa~~~~ 152 (341)
.++..+...++++.+.++.
T Consensus 172 -----aa~~~~~~~la~e~~~~gi 190 (270)
T 3is3_A 172 -----GAVDSFVRIFSKDCGDKKI 190 (270)
T ss_dssp -----HHHHHHHHHHHHHHGGGTC
T ss_pred -----HHHHHHHHHHHHHhcccCe
Confidence 5666677777776665544
No 410
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=76.65 E-value=12 Score=29.67 Aligned_cols=53 Identities=11% Similarity=-0.043 Sum_probs=39.8
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
..+|..+|-++...+.+++-++..+. .+ ....|..+.+.... ...||+|++|-
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~------~v-~~~~~~~~al~~l~--~~~~dlii~D~ 59 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGY------QT-EHVRNGREAVRFLS--LTRPDLIISDV 59 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC------EE-EEESSHHHHHHHHT--TCCCSEEEEES
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCC------EE-EEeCCHHHHHHHHH--hCCCCEEEEeC
Confidence 35799999999999999999987665 23 34456666666543 34799999996
No 411
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=76.65 E-value=23 Score=27.00 Aligned_cols=53 Identities=6% Similarity=-0.030 Sum_probs=38.1
Q ss_pred CEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++. .+. .......+..+.+..... ..+|+|++|-
T Consensus 9 ~~iLivdd~~~~~~~l~~~L~~~~~~------~~v~~~~~~~~a~~~l~~--~~~dlii~d~ 62 (143)
T 3cnb_A 9 FSILIIEDDKEFADMLTQFLENLFPY------AKIKIAYNPFDAGDLLHT--VKPDVVMLDL 62 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCTT------CEEEEECSHHHHHHHHHH--TCCSEEEEET
T ss_pred ceEEEEECCHHHHHHHHHHHHhccCc------cEEEEECCHHHHHHHHHh--cCCCEEEEec
Confidence 4799999999999999999987 665 212344555555544432 3699999996
No 412
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=76.43 E-value=3.3 Score=38.81 Aligned_cols=86 Identities=19% Similarity=0.167 Sum_probs=54.4
Q ss_pred ccccHhHHHHhhhC-CCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC
Q 019408 2 CGCGIRSLRYLAEA-KADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 2 agsG~rgir~a~e~-ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg 80 (341)
++.|...+.+|+.. |+ +|++.|.|++-.+++++ .|.+ .+.-...+..+.+.+.. .+..+|+| +|.-|
T Consensus 196 G~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~vi~~~~~~~~~v~~~~-~g~g~Dvv-id~~G 263 (359)
T 1h2b_A 196 GGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER----LGAD-----HVVDARRDPVKQVMELT-RGRGVNVA-MDFVG 263 (359)
T ss_dssp SHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH----TTCS-----EEEETTSCHHHHHHHHT-TTCCEEEE-EESSC
T ss_pred CHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH----hCCC-----EEEeccchHHHHHHHHh-CCCCCcEE-EECCC
Confidence 35677888888877 88 69999999998888764 4542 22111222223333332 23468976 57766
Q ss_pred CCHH--HHHHHHHhcccCCEEEEE
Q 019408 81 SDSS--FLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 81 sp~~--fld~al~~v~~gGlL~vt 102 (341)
.+ . .++.++++ ++|.+.+.
T Consensus 264 ~~-~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 264 SQ-ATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp CH-HHHHHGGGGEE--EEEEEEEC
T ss_pred Cc-hHHHHHHHhhc--CCCEEEEE
Confidence 53 3 67778887 77877753
No 413
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=76.37 E-value=14 Score=28.58 Aligned_cols=52 Identities=12% Similarity=-0.064 Sum_probs=37.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+..... ..+|+|++|-
T Consensus 9 ~~iLivd~~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~--~~~dlii~d~ 60 (147)
T 2zay_A 9 WRIMLVDTQLPALAASISALSQEGF------DII-QCGNAIEAVPVAVK--THPHLIITEA 60 (147)
T ss_dssp EEEEEECTTGGGGHHHHHHHHHHTE------EEE-EESSHHHHHHHHHH--HCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCC------eEE-EeCCHHHHHHHHHc--CCCCEEEEcC
Confidence 4699999999999999999987665 233 44555555554432 3699999996
No 414
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=75.96 E-value=23 Score=26.61 Aligned_cols=52 Identities=15% Similarity=-0.046 Sum_probs=38.9
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++..++..+. .+. ...+....+.... ...+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~------~v~-~~~~~~~~~~~~~--~~~~dlvi~D~ 55 (126)
T 1dbw_A 4 YTVHIVDDEEPVRKSLAFMLTMNGF------AVK-MHQSAEAFLAFAP--DVRNGVLVTDL 55 (126)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTC------EEE-EESCHHHHHHHGG--GCCSEEEEEEC
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc------EEE-EeCCHHHHHHHHh--cCCCCEEEEEC
Confidence 4689999999999999999987665 333 4566666666543 24689999995
No 415
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=75.92 E-value=23 Score=26.71 Aligned_cols=51 Identities=18% Similarity=0.006 Sum_probs=36.5
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++.-++ .+. .+. ...|....+..... ..+|+|++|.
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~-~~~------~v~-~~~~~~~a~~~l~~--~~~dlvi~d~ 55 (133)
T 3nhm_A 5 PKVLIVENSWTMRETLRLLLS-GEF------DCT-TAADGASGLQQALA--HPPDVLISDV 55 (133)
T ss_dssp CEEEEECSCHHHHHHHHHHHT-TTS------EEE-EESSHHHHHHHHHH--SCCSEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHh-CCc------EEE-EECCHHHHHHHHhc--CCCCEEEEeC
Confidence 479999999999999988776 443 332 45566666654432 4699999997
No 416
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=75.83 E-value=18 Score=28.35 Aligned_cols=52 Identities=15% Similarity=0.103 Sum_probs=36.5
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++. +. .+. ...|..+.+..... ...||+|++|-
T Consensus 5 ~~ILivdd~~~~~~~l~~~L~~-~~------~v~-~~~~~~~a~~~l~~-~~~~dlvi~D~ 56 (151)
T 3kcn_A 5 ERILLVDDDYSLLNTLKRNLSF-DF------EVT-TCESGPEALACIKK-SDPFSVIMVDM 56 (151)
T ss_dssp CEEEEECSCHHHHHHHHHHHTT-TS------EEE-EESSHHHHHHHHHH-SCCCSEEEEES
T ss_pred CeEEEEeCCHHHHHHHHHHhcc-Cc------eEE-EeCCHHHHHHHHHc-CCCCCEEEEeC
Confidence 4799999999999999988863 43 332 44566666554432 33589999996
No 417
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=75.72 E-value=11 Score=28.52 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=39.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++..++..+. .+. ...|..+.+.... ...+|+|++|-
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~g~------~v~-~~~~~~~al~~l~--~~~~dlvllD~ 54 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKEGY------EVI-EAENGQIALEKLS--EFTPDLIVLXI 54 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHT--TBCCSEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCc------EEE-EeCCHHHHHHHHH--hcCCCEEEEec
Confidence 3689999999999999999987765 332 4567777766553 34799999995
No 418
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=75.41 E-value=25 Score=26.78 Aligned_cols=52 Identities=12% Similarity=-0.086 Sum_probs=37.1
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
-+|..+|-++...+.+++-++..+. .+ ....|..+.+..... ..+|+|++|-
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~~~------~v-~~~~~~~~a~~~l~~--~~~dlvi~d~ 59 (137)
T 3hdg_A 8 LKILIVEDDTDAREWLSTIISNHFP------EV-WSAGDGEEGERLFGL--HAPDVIITDI 59 (137)
T ss_dssp CCEEEECSCHHHHHHHHHHHHTTCS------CE-EEESSHHHHHHHHHH--HCCSEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHHHHhcCc------EE-EEECCHHHHHHHHhc--cCCCEEEEeC
Confidence 4689999999999999999986443 22 234555555554432 3699999996
No 419
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=75.32 E-value=25 Score=30.93 Aligned_cols=69 Identities=9% Similarity=-0.031 Sum_probs=42.7
Q ss_pred cccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCcccE
Q 019408 3 GCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFDL 73 (341)
Q Consensus 3 gsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fDv 73 (341)
|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|. .+++.+....-.+.|+
T Consensus 19 as~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (264)
T 3ucx_A 19 VGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGR------RALSVGTDITDDAQVAHLVDETMKAYGRVDV 91 (264)
T ss_dssp CCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred CCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCC------cEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 556666555443 576 599999999988888877765432 455555553 3334333333346898
Q ss_pred EEeCC
Q 019408 74 IDIDS 78 (341)
Q Consensus 74 IdlDP 78 (341)
++--.
T Consensus 92 lv~nA 96 (264)
T 3ucx_A 92 VINNA 96 (264)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 87654
No 420
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=75.18 E-value=5.3 Score=38.07 Aligned_cols=77 Identities=18% Similarity=0.090 Sum_probs=53.1
Q ss_pred ccccHhHHHHhhhCC-CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC--CcccEEEeCC
Q 019408 2 CGCGIRSLRYLAEAK-ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR--EFFDLIDIDS 78 (341)
Q Consensus 2 agsG~rgir~a~e~g-a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~--~~fDvIdlDP 78 (341)
.|.|.-+...+...| ..+|+++|.++.|++..+ ++ .. .++++++++...+...+...+ .++|.|.+|-
T Consensus 66 lG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~----~Rv~lv~~nF~~l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 66 FGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DD----PRFSIIHGPFSALGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CC----TTEEEEESCGGGHHHHHHHTTCTTCEEEEEEEC
T ss_pred cCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cC----CcEEEEeCCHHHHHHHHHhcCCCCcccEEEECC
Confidence 478888888776434 368999999999999883 33 11 467888877666544332222 2599999998
Q ss_pred -CCCCHHHHHHH
Q 019408 79 -FGSDSSFLRTV 89 (341)
Q Consensus 79 -ygsp~~fld~a 89 (341)
+.| +.+|.+
T Consensus 137 GVSS--~QlD~~ 146 (347)
T 3tka_A 137 GVSS--PQLDDA 146 (347)
T ss_dssp SCCH--HHHHCG
T ss_pred ccCH--HHhcCC
Confidence 443 777743
No 421
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=75.14 E-value=45 Score=29.97 Aligned_cols=73 Identities=8% Similarity=-0.041 Sum_probs=42.5
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+++ .|+ +|+++|.+++..+.+.+.+...+.. ..++.++..|.. +++.+....-...|
T Consensus 33 Gas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 108 (297)
T 1xhl_A 33 GSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVP---AEKINAVVADVTEASGQDDIINTTLAKFGKID 108 (297)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCC---CceEEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4677777666553 576 5999999998877776666543210 014556666543 23333222223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+--.
T Consensus 109 ~lvnnA 114 (297)
T 1xhl_A 109 ILVNNA 114 (297)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 422
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=75.09 E-value=4.6 Score=36.97 Aligned_cols=128 Identities=13% Similarity=0.173 Sum_probs=64.5
Q ss_pred cccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEecc------HHHHHHHhhhcCCcccE
Q 019408 3 GCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFD------ANRVLSECYLKREFFDL 73 (341)
Q Consensus 3 gsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~D------A~~~l~~~~~~~~~fDv 73 (341)
||+..|...|+. .|+ +|+++|.+++.++-..+.+ +- ++..+..| +.+++.+...+-.+.|+
T Consensus 37 as~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 37 ATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---GG------GAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp CSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CT------TCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred cCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---CC------CeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 344444444332 477 5999999998877665443 21 22333444 33344443332235687
Q ss_pred EEeCC-------CCC--CHHHH--------------HHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCC
Q 019408 74 IDIDS-------FGS--DSSFL--------------RTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPY 130 (341)
Q Consensus 74 IdlDP-------ygs--p~~fl--------------d~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~ 130 (341)
++-.- +.. +..|- ..++..++++|-+...++-. |..+....--|+++-
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~----~~~~~~~~~~Y~asK----- 177 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTA----GSTGTPAFSVYAASK----- 177 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG----GGSCCTTCHHHHHHH-----
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehh----hccCCCCchHHHHHH-----
Confidence 76543 211 11111 25556667666655444422 222333334455432
Q ss_pred chhhhHHHHHHHHHHHHHhcCC
Q 019408 131 SNEIGLRMLIGGAVREASAQGY 152 (341)
Q Consensus 131 ~~E~~lR~ll~~i~~~Aa~~~~ 152 (341)
-|+.-|-..++.+-+.+|+
T Consensus 178 ---aav~~ltr~lA~Ela~~gI 196 (273)
T 4fgs_A 178 ---AALRSFARNWILDLKDRGI 196 (273)
T ss_dssp ---HHHHHHHHHHHHHTTTSCE
T ss_pred ---HHHHHHHHHHHHHhcccCe
Confidence 5677677666666555543
No 423
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=74.94 E-value=22 Score=27.06 Aligned_cols=52 Identities=13% Similarity=0.007 Sum_probs=37.4
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+..... ..+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~--~~~dlvi~d~ 55 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFS------KVI-TLSSPVSLSTVLRE--ENPEVVLLDM 55 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSS------EEE-EECCHHHHHHHHHH--SCEEEEEEET
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCc------EEE-EeCCHHHHHHHHHc--CCCCEEEEeC
Confidence 4689999999999999998886654 333 34555555554432 3699999996
No 424
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=74.49 E-value=19 Score=32.08 Aligned_cols=70 Identities=9% Similarity=0.018 Sum_probs=40.7
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeC-------------CHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HH
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDG-------------NDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NR 59 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Di-------------s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~ 59 (341)
.|+|..|...+++ .|+ +|+++|. +++..+.+.+-++..+. ++.++..|. .+
T Consensus 22 Gas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 22 GAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR------KALTRVLDVRDDAALRE 94 (280)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC------CEEEEECCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCC------eEEEEEcCCCCHHHHHH
Confidence 3566667665543 576 5889998 67777776666654432 455555554 33
Q ss_pred HHHHhhhcCCcccEEEeCC
Q 019408 60 VLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 60 ~l~~~~~~~~~fDvIdlDP 78 (341)
++.+....-.+.|+++.-.
T Consensus 95 ~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 95 LVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 3333322223679887654
No 425
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=74.42 E-value=45 Score=29.35 Aligned_cols=72 Identities=10% Similarity=-0.042 Sum_probs=42.9
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|+++|.++...+.+.+.++..+.. .++.++..|.. +++......-...|
T Consensus 39 GasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 113 (279)
T 1xg5_A 39 GASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYP----GTLIPYRCDLSNEEDILSMFSAIRSQHSGVD 113 (279)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCS----SEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCC----ceEEEEEecCCCHHHHHHHHHHHHHhCCCCC
Confidence 4677777666553 575 6999999998887777766654431 24555665543 22222221123589
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+.-.
T Consensus 114 ~vi~~A 119 (279)
T 1xg5_A 114 ICINNA 119 (279)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887643
No 426
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=74.34 E-value=2.5 Score=39.84 Aligned_cols=86 Identities=17% Similarity=0.189 Sum_probs=54.4
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCC
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGS 81 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygs 81 (341)
+|.|...+..|+..|+ +|++.|.+++..+.+++. .+. +. .+...|. +.+.+.. ..+|+|+ |.-|.
T Consensus 197 G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~---lGa-----~~-v~~~~~~-~~~~~~~---~~~D~vi-d~~g~ 261 (366)
T 1yqd_A 197 GGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKN---FGA-----DS-FLVSRDQ-EQMQAAA---GTLDGII-DTVSA 261 (366)
T ss_dssp SHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHT---SCC-----SE-EEETTCH-HHHHHTT---TCEEEEE-ECCSS
T ss_pred CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cCC-----ce-EEeccCH-HHHHHhh---CCCCEEE-ECCCc
Confidence 3567777888887888 799999998877766532 343 12 2222332 2333332 2689774 66554
Q ss_pred CHHHHHHHHHhcccCCEEEEEe
Q 019408 82 DSSFLRTVFNAVKRDGLLYLTS 103 (341)
Q Consensus 82 p~~fld~al~~v~~gGlL~vt~ 103 (341)
+ ..++.++++++++|.+....
T Consensus 262 ~-~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 262 V-HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp C-CCSHHHHHHEEEEEEEEECC
T ss_pred H-HHHHHHHHHHhcCCEEEEEc
Confidence 3 34577899999999888643
No 427
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=74.31 E-value=26 Score=26.62 Aligned_cols=54 Identities=6% Similarity=-0.025 Sum_probs=36.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++..++..+- -.......|..+.+..... ..+|+|++|-
T Consensus 4 ~~Ilivdd~~~~~~~l~~~l~~~~~-----~~~v~~~~~~~~al~~~~~--~~~dlvilD~ 57 (133)
T 3b2n_A 4 TSLIIAEDQNMLRQAMVQLIKLHGD-----FEILADTDNGLDAMKLIEE--YNPNVVILDI 57 (133)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHSS-----EEEEEEESCHHHHHHHHHH--HCCSEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCC-----cEEEEEcCCHHHHHHHHhh--cCCCEEEEec
Confidence 3689999999999999999986641 0122234555555544322 3689999996
No 428
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=74.29 E-value=24 Score=30.56 Aligned_cols=77 Identities=18% Similarity=0.062 Sum_probs=48.7
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC---CCCCHHHHHHHHHhcc
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS---FGSDSSFLRTVFNAVK 94 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP---ygsp~~fld~al~~v~ 94 (341)
.+|..+|-++...+.++.-++..+. .+. ...|..+.+..... ..||+|++|- -.....++. .++...
T Consensus 24 ~~ILivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~al~~~~~--~~~dlvllD~~lp~~~g~~~~~-~lr~~~ 93 (250)
T 3r0j_A 24 ARVLVVDDEANIVELLSVSLKFQGF------EVY-TATNGAQALDRARE--TRPDAVILDVXMPGMDGFGVLR-RLRADG 93 (250)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--HCCSEEEEESCCSSSCHHHHHH-HHHHTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCC------EEE-EECCHHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHH-HHHhcC
Confidence 4799999999999999999987665 333 45566666655432 3699999995 222223333 233322
Q ss_pred -cCCEEEEEec
Q 019408 95 -RDGLLYLTST 104 (341)
Q Consensus 95 -~gGlL~vt~T 104 (341)
.--++.+|+.
T Consensus 94 ~~~~ii~lt~~ 104 (250)
T 3r0j_A 94 IDAPALFLTAR 104 (250)
T ss_dssp CCCCEEEEECS
T ss_pred CCCCEEEEECC
Confidence 2346667664
No 429
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=74.27 E-value=1.6 Score=40.41 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=52.6
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH--HHHHHhhhcCCcccEEEeCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN--RVLSECYLKREFFDLIDIDSFG 80 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~--~~l~~~~~~~~~fDvIdlDPyg 80 (341)
|.|...+.+|+..|++ |++.|.+++..+.+++ .+.+ . ++..+-. +.+.. ..+..+|+| +|.-|
T Consensus 162 ~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~~----lGa~-----~--v~~~~~~~~~~~~~--~~~~~~d~v-id~~g 226 (330)
T 1tt7_A 162 GVGGIAVSMLNKRGYD-VVASTGNREAADYLKQ----LGAS-----E--VISREDVYDGTLKA--LSKQQWQGA-VDPVG 226 (330)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEESSSSTHHHHHH----HTCS-----E--EEEHHHHCSSCCCS--SCCCCEEEE-EESCC
T ss_pred HHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH----cCCc-----E--EEECCCchHHHHHH--hhcCCccEE-EECCc
Confidence 4566667777777885 8999999877777754 4542 2 2221111 00111 112358875 67777
Q ss_pred CCHHHHHHHHHhcccCCEEEE
Q 019408 81 SDSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 81 sp~~fld~al~~v~~gGlL~v 101 (341)
. +.++.++++++++|-+.+
T Consensus 227 ~--~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 227 G--KQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp T--HHHHHHHTTEEEEEEEEE
T ss_pred H--HHHHHHHHhhcCCCEEEE
Confidence 5 578899999999999886
No 430
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=74.19 E-value=23 Score=31.45 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=39.6
Q ss_pred cccHhHHHHhhh---CCCCEEEEeeC-------------CHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HH
Q 019408 3 GCGIRSLRYLAE---AKADFVMANDG-------------NDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RV 60 (341)
Q Consensus 3 gsG~rgir~a~e---~ga~~V~~~Di-------------s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~ 60 (341)
|||..|...+.+ .|+ +|+++|. +++..+...+-++..+. ++.++..|.. ++
T Consensus 19 as~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 19 AARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR------RIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp TTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCC------eEEEEECCCCCHHHHHHH
Confidence 566666655543 576 6889998 67776666665554432 4555555543 23
Q ss_pred HHHhhhcCCcccEEEeCC
Q 019408 61 LSECYLKREFFDLIDIDS 78 (341)
Q Consensus 61 l~~~~~~~~~fDvIdlDP 78 (341)
+.+....-.+.|+++.-.
T Consensus 92 ~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 92 VDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 333222223579887654
No 431
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=74.17 E-value=26 Score=30.47 Aligned_cols=69 Identities=10% Similarity=-0.030 Sum_probs=41.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|.. +++.+....-...|
T Consensus 14 Gas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 86 (247)
T 2jah_A 14 GASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGA------KVHVLELDVADRQGVDAAVASTVEALGGLD 86 (247)
T ss_dssp SCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC------cEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3677777665543 576 699999999888777766654332 3455555542 23332222223579
Q ss_pred EEEeC
Q 019408 73 LIDID 77 (341)
Q Consensus 73 vIdlD 77 (341)
+++.-
T Consensus 87 ~lv~n 91 (247)
T 2jah_A 87 ILVNN 91 (247)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88753
No 432
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=74.04 E-value=26 Score=26.47 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=37.9
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
-+|..+|-++...+.+++-++..+.. .+ ....+..+.+..... ...+|+|++|-
T Consensus 6 ~~iLivdd~~~~~~~l~~~L~~~g~~-----~v-~~~~~~~~a~~~~~~-~~~~dlvi~D~ 59 (129)
T 3h1g_A 6 MKLLVVDDSSTMRRIIKNTLSRLGYE-----DV-LEAEHGVEAWEKLDA-NADTKVLITDW 59 (129)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCC-----CE-EEESSHHHHHHHHHH-CTTCCEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCCc-----EE-EEeCCHHHHHHHHHh-CCCCCEEEEeC
Confidence 46899999999999999999877652 22 334455555543322 23689999995
No 433
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=74.03 E-value=25 Score=30.76 Aligned_cols=66 Identities=12% Similarity=0.041 Sum_probs=39.6
Q ss_pred hHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCcccEEEeC
Q 019408 7 RSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFDLIDID 77 (341)
Q Consensus 7 rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fDvIdlD 77 (341)
.|...+.+ .|+ +|+++|.+++..+.+.+.++..+- .++.++..|.. +++.+......+.|+|+.-
T Consensus 35 IG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ 108 (266)
T 3o38_A 35 IGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGL-----GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNN 108 (266)
T ss_dssp HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCS-----SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred hHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC-----CceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEEC
Confidence 45444432 575 599999999888877776654321 35666666643 3333332222367988776
Q ss_pred C
Q 019408 78 S 78 (341)
Q Consensus 78 P 78 (341)
.
T Consensus 109 A 109 (266)
T 3o38_A 109 A 109 (266)
T ss_dssp C
T ss_pred C
Confidence 5
No 434
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=74.02 E-value=26 Score=31.36 Aligned_cols=71 Identities=8% Similarity=-0.046 Sum_probs=42.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.+...+- ..+.++..|. .+++.+....-.+.|
T Consensus 40 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 113 (281)
T 4dry_A 40 GGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTG-----NIVRAVVCDVGDPDQVAALFAAVRAEFARLD 113 (281)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-----CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3667677665543 576 599999999888877776654322 1234455553 233333322223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 114 ~lvnnA 119 (281)
T 4dry_A 114 LLVNNA 119 (281)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 435
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=74.00 E-value=26 Score=26.33 Aligned_cols=53 Identities=8% Similarity=-0.098 Sum_probs=38.5
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+..... ...+|+|++|-
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~-~~~~dlvi~d~ 58 (132)
T 2rdm_A 6 VTILLADDEAILLLDFESTLTDAGF------LVT-AVSSGAKAIEMLKS-GAAIDGVVTDI 58 (132)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHT-TCCCCEEEEES
T ss_pred ceEEEEcCcHHHHHHHHHHHHHcCC------EEE-EECCHHHHHHHHHc-CCCCCEEEEee
Confidence 4689999999999999999987665 333 35566666654432 12699999996
No 436
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=73.88 E-value=2.6 Score=39.42 Aligned_cols=84 Identities=13% Similarity=0.050 Sum_probs=47.8
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCCCC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFGSD 82 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPygsp 82 (341)
+.|...+.+|+..|+.+|++.+ +++-.+.++ .+.+ .+.-...|..+.+.+. .+..+|+|+ |.-|.
T Consensus 154 ~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~-----~~~~~~~~~~~~~~~~--~~~g~Dvv~-d~~g~- 218 (349)
T 4a27_A 154 GVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT-----HLFDRNADYVQEVKRI--SAEGVDIVL-DCLCG- 218 (349)
T ss_dssp HHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS-----EEEETTSCHHHHHHHH--CTTCEEEEE-EECC--
T ss_pred HHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc-----EEEcCCccHHHHHHHh--cCCCceEEE-ECCCc-
Confidence 4567777888766777888888 444334433 3442 2211234555555544 245799654 66564
Q ss_pred HHHHHHHHHhcccCCEEEEE
Q 019408 83 SSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 83 ~~fld~al~~v~~gGlL~vt 102 (341)
+.++.++++++++|-+.+.
T Consensus 219 -~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 219 -DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp -------CTTEEEEEEEEEE
T ss_pred -hhHHHHHHHhhcCCEEEEE
Confidence 3348899999999999873
No 437
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=73.84 E-value=2.9 Score=43.01 Aligned_cols=55 Identities=15% Similarity=0.104 Sum_probs=40.8
Q ss_pred cEEEEeccHHHHHHHhhhc-CCcccEEEeCCCCCC-------HHHHHHHHHhcccCCEEEEEec
Q 019408 49 RWVVTHFDANRVLSECYLK-REFFDLIDIDSFGSD-------SSFLRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 49 ~~~v~~~DA~~~l~~~~~~-~~~fDvIdlDPygsp-------~~fld~al~~v~~gGlL~vt~T 104 (341)
..++..+||.+.|.++... ...+|.|++|||... ..|+....+++++||.++. .|
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t-~~ 211 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST-FT 211 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE-SC
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe-cc
Confidence 4668899999999865311 357999999998632 3667777788899998774 44
No 438
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=73.69 E-value=6.8 Score=31.67 Aligned_cols=52 Identities=17% Similarity=0.108 Sum_probs=38.5
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|=++...+++++-++..|+. .+ ....|....+..... ..||+|++|=
T Consensus 14 rILiVDD~~~~r~~l~~~L~~~G~~-----~v-~~a~~g~~al~~~~~--~~~DlillD~ 65 (134)
T 3to5_A 14 KILIVDDFSTMRRIVKNLLRDLGFN-----NT-QEADDGLTALPMLKK--GDFDFVVTDW 65 (134)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC-----CE-EEESSHHHHHHHHHH--HCCSEEEEES
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCc-----EE-EEECCHHHHHHHHHh--CCCCEEEEcC
Confidence 5999999999999999999988762 22 234555555554432 4799999995
No 439
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=73.65 E-value=47 Score=29.21 Aligned_cols=70 Identities=9% Similarity=-0.113 Sum_probs=43.1
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+ .++.++..|.. +++.+....-...|
T Consensus 38 GasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 110 (272)
T 1yb1_A 38 GAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG------AKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 110 (272)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC------CeEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 4677777766554 565 59999999988877777666443 24555666543 23333222223689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+--.
T Consensus 111 ~li~~A 116 (272)
T 1yb1_A 111 ILVNNA 116 (272)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 440
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=73.65 E-value=34 Score=29.76 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=41.2
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+ .++.++..|.. +++.+....-...|
T Consensus 9 Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 9 GAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAG------GHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 3667777666543 575 69999999887776666665433 23455555543 23333222223689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+.-.
T Consensus 82 ~lv~nA 87 (256)
T 1geg_A 82 VIVNNA 87 (256)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 441
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=73.61 E-value=3 Score=33.23 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=42.3
Q ss_pred eehhHHHhhcCCCCCCHHHHHHHHHHCCCEEeeeecCCCceecCCCHHH--HHHHHHhh
Q 019408 279 IKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMVA--CIRIAKEL 335 (341)
Q Consensus 279 y~~~~l~~~~k~~~p~~~~~~~~L~~~Gy~as~tH~~~~~iKTdAp~~~--i~~i~~~~ 335 (341)
.+..+||..++++.+...+++..|+++||-.+.. =...|++-.-|+++ +.||++.+
T Consensus 27 ~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~~~-g~~ggy~L~~~~~~itl~di~~~~ 84 (129)
T 2y75_A 27 TSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIR-GAYGGYVLGSEPDAITAGDIIRVL 84 (129)
T ss_dssp BCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEC-----CCEEESSCGGGCBHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHHHHCCceEecC-CCCCceEeCCCHHHCcHHHHHHHH
Confidence 6899999999999999999999999999965532 12357777777666 66666654
No 442
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=73.40 E-value=28 Score=26.57 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=38.7
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcC--------CcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKR--------EFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~--------~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+.. ..+ ....+..+.+..+.... ..||+|++|-
T Consensus 7 ~~iLivdd~~~~~~~l~~~L~~~g~~----~~v-~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~ 70 (149)
T 1k66_A 7 QPLLVVEDSDEDFSTFQRLLQREGVV----NPI-YRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDL 70 (149)
T ss_dssp SCEEEECCCHHHHHHHHHHHHHTTBC----SCE-EEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECS
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCC----ceE-EEECCHHHHHHHHHhcccccCcccCCCCcEEEEEC
Confidence 46899999999999999999977641 123 23455555555443210 5799999996
No 443
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=73.18 E-value=26 Score=26.07 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=37.0
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...+..+.+..... ..+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~------~v~-~~~~~~~a~~~~~~--~~~dlvl~D~ 55 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKEGY------QTF-QAANGLQALDIVTK--ERPDLVLLDM 55 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTC------EEE-EESSHHHHHHHHHH--HCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCc------EEE-EeCCHHHHHHHHhc--cCCCEEEEec
Confidence 3689999999999999999886554 232 44555555544322 3689999995
No 444
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=73.06 E-value=31 Score=26.91 Aligned_cols=52 Identities=13% Similarity=0.022 Sum_probs=38.3
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...|..+.+..+.. ..||+|++|-
T Consensus 15 ~~ILivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~--~~~dlvi~D~ 66 (153)
T 3hv2_A 15 PEILLVDSQEVILQRLQQLLSPLPY------TLH-FARDATQALQLLAS--REVDLVISAA 66 (153)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSC------EEE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred ceEEEECCCHHHHHHHHHHhcccCc------EEE-EECCHHHHHHHHHc--CCCCEEEEeC
Confidence 5799999999999999998886654 232 45566666654432 4699999996
No 445
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=72.64 E-value=2.9 Score=34.52 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=44.5
Q ss_pred ceehhHHHhhcCCCCCCHHHHHHHHHHCCCEEeeeecCCCceecCCCHHH--HHHHHHhh
Q 019408 278 YIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMVA--CIRIAKEL 335 (341)
Q Consensus 278 yy~~~~l~~~~k~~~p~~~~~~~~L~~~Gy~as~tH~~~~~iKTdAp~~~--i~~i~~~~ 335 (341)
..+..+||..++++.+-+.+++..|+++|+-.|.-- ..|++-.-|+++ +.||++.+
T Consensus 30 ~~~~~~iA~~~~i~~~~l~kil~~L~~~Glv~s~rG--~GGy~L~~~p~~Itl~dVi~a~ 87 (149)
T 1ylf_A 30 LCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRG--PGGAGLLKDLHEITLLDVYHAV 87 (149)
T ss_dssp GCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC-----CCEEESSCGGGCBHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEccC--CCceEeCCChhhCcHHHHHHHH
Confidence 378999999999988888999999999999777655 568988888776 56666654
No 446
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=72.46 E-value=2.5 Score=43.30 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=40.0
Q ss_pred cEEEEeccHHHHHHHhhhc-CCcccEEEeCCCCC-------CHHHHHHHHHhcccCCEEEE
Q 019408 49 RWVVTHFDANRVLSECYLK-REFFDLIDIDSFGS-------DSSFLRTVFNAVKRDGLLYL 101 (341)
Q Consensus 49 ~~~v~~~DA~~~l~~~~~~-~~~fDvIdlDPygs-------p~~fld~al~~v~~gGlL~v 101 (341)
..++..+|+.+.|.+.... ...||.|++|+|.. ...++....+++++||.++.
T Consensus 157 ~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 157 TLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 3567889999999875321 35799999999973 13566777788999998884
No 447
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=72.42 E-value=8.3 Score=34.52 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=42.4
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|+|..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++..+..|. .+++.+....-...|
T Consensus 35 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (270)
T 3ftp_A 35 GASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGL------EGRGAVLNVNDATAVDALVESTLKEFGALN 107 (270)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTC------CCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------cEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3566666655543 576 699999999988888887776543 233444443 233333322223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 108 ~lvnnA 113 (270)
T 3ftp_A 108 VLVNNA 113 (270)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 448
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=72.39 E-value=30 Score=28.61 Aligned_cols=52 Identities=19% Similarity=0.041 Sum_probs=39.3
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++.-++..+. .+. ...+..+.+.... ...+|+|++|-
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~al~~~~--~~~~dlvl~D~ 56 (208)
T 1yio_A 5 PTVFVVDDDMSVREGLRNLLRSAGF------EVE-TFDCASTFLEHRR--PEQHGCLVLDM 56 (208)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTC------EEE-EESSHHHHHHHCC--TTSCEEEEEES
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc------eEE-EcCCHHHHHHhhh--ccCCCEEEEeC
Confidence 4699999999999999999986554 333 4567777776542 34699999996
No 449
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.23 E-value=30 Score=26.55 Aligned_cols=51 Identities=10% Similarity=-0.091 Sum_probs=35.7
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.++.-++..+. .+. ...+....+..... ..+|+|++|-
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~--~~~dlvllD~ 56 (137)
T 3cfy_A 6 RVLLVEDSTSLAILYKQYVKDEPY------DIF-HVETGRDAIQFIER--SKPQLIILDL 56 (137)
T ss_dssp EEEEECSCTTHHHHHHHHTTTSSS------EEE-EESSHHHHHHHHHH--HCCSEEEECS
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCc------eEE-EeCCHHHHHHHHHh--cCCCEEEEec
Confidence 689999999999999988775444 332 34555555544322 3689999995
No 450
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=72.13 E-value=27 Score=30.57 Aligned_cols=70 Identities=11% Similarity=-0.032 Sum_probs=40.3
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHH------HHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDAN------RVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~f 71 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++.. +. ++.++..|.. +++.+....-...
T Consensus 14 Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (263)
T 3ai3_A 14 GSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGV------RVLEVAVDVATPEGVDAVVESVRSSFGGA 86 (263)
T ss_dssp SCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCC------CEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCC------ceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3667777666543 576 6999999988777666655432 32 3455555543 2233222222357
Q ss_pred cEEEeCC
Q 019408 72 DLIDIDS 78 (341)
Q Consensus 72 DvIdlDP 78 (341)
|+|+--.
T Consensus 87 d~lv~~A 93 (263)
T 3ai3_A 87 DILVNNA 93 (263)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9887654
No 451
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=72.11 E-value=18 Score=32.35 Aligned_cols=70 Identities=6% Similarity=-0.059 Sum_probs=42.5
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|.. +++.+....-.+.|
T Consensus 31 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 31 GVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGH------DVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC------CEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------cEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 3566667655543 576 599999999888877776664332 4555665543 23333322223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 104 ~lv~nA 109 (279)
T 3sju_A 104 ILVNSA 109 (279)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 452
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=71.43 E-value=29 Score=31.64 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=39.9
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCC------------HHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHH
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGN------------DAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRV 60 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis------------~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~ 60 (341)
.|||..|...+.+ .|+ +|+++|.+ ++..+...+.++..+. ++.++..|. .++
T Consensus 53 Gas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 53 GAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR------RIIARQADVRDLASLQAV 125 (317)
T ss_dssp SCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCC------eEEEEECCCCCHHHHHHH
Confidence 3667777665543 576 58888886 6666655555554432 455555554 333
Q ss_pred HHHhhhcCCcccEEEeCC
Q 019408 61 LSECYLKREFFDLIDIDS 78 (341)
Q Consensus 61 l~~~~~~~~~fDvIdlDP 78 (341)
+.+....-.+.|+++.-.
T Consensus 126 ~~~~~~~~g~iD~lVnnA 143 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNV 143 (317)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 333322223689887654
No 453
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=71.30 E-value=23 Score=30.60 Aligned_cols=70 Identities=9% Similarity=-0.007 Sum_probs=45.0
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|. .+++.+......+.|
T Consensus 12 Gas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 12 GASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGF------KARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp SCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------ceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4677777665544 575 599999999888887777765543 455555554 333444433344689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+.-.
T Consensus 85 ~li~~A 90 (247)
T 3lyl_A 85 ILVNNA 90 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 988765
No 454
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=70.91 E-value=37 Score=29.06 Aligned_cols=71 Identities=8% Similarity=-0.081 Sum_probs=43.5
Q ss_pred ccccHhHHHHhhh---CCCC------EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHH------HHHHhhh
Q 019408 2 CGCGIRSLRYLAE---AKAD------FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANR------VLSECYL 66 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~------~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~------~l~~~~~ 66 (341)
.|||..|...+.+ .|+. +|++.|.+++..+.+.+.++..+ .++.++..|..+ ++.....
T Consensus 9 GasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 9 GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG------ALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT------CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC------CeeeEEEecCCCHHHHHHHHHHHHH
Confidence 4677777666553 4764 79999999988877776665322 245566666432 2332222
Q ss_pred cCCcccEEEeCC
Q 019408 67 KREFFDLIDIDS 78 (341)
Q Consensus 67 ~~~~fDvIdlDP 78 (341)
.....|+|+.-.
T Consensus 83 ~~g~id~li~~A 94 (244)
T 2bd0_A 83 RYGHIDCLVNNA 94 (244)
T ss_dssp HTSCCSEEEECC
T ss_pred hCCCCCEEEEcC
Confidence 223689887643
No 455
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=70.74 E-value=52 Score=28.51 Aligned_cols=69 Identities=12% Similarity=0.022 Sum_probs=40.8
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhc-CCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLK-REFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~-~~~f 71 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|.. +++...... +.+.
T Consensus 21 GasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 93 (266)
T 1xq1_A 21 GGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGF------QVTGSVCDASLRPEREKLMQTVSSMFGGKL 93 (266)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------eeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4677777666553 575 699999998887776666654332 3555555543 223222111 1357
Q ss_pred cEEEeC
Q 019408 72 DLIDID 77 (341)
Q Consensus 72 DvIdlD 77 (341)
|+|+.-
T Consensus 94 d~li~~ 99 (266)
T 1xq1_A 94 DILINN 99 (266)
T ss_dssp SEEEEE
T ss_pred cEEEEC
Confidence 987653
No 456
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=70.72 E-value=31 Score=25.93 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=35.9
Q ss_pred EEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.+++-++.. +. .+.....|..+.+..... ..+|+|++|-
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~~~~------~~~~~~~~~~~a~~~~~~--~~~dlvllD~ 56 (130)
T 1dz3_A 4 KVCIADDNRELVSLLDEYISSQPDM------EVIGTAYNGQDCLQMLEE--KRPDILLLDI 56 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTTE------EEEEEESSHHHHHHHHHH--HCCSEEEEES
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc------eEEEEeCCHHHHHHHHhc--CCCCEEEEec
Confidence 5889999999999999988754 32 222234566665554432 3689999996
No 457
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=70.49 E-value=26 Score=26.83 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=38.9
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc----CCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK----REFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~----~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+.. ..+. ...+..+.+..+... ...+|+|++|-
T Consensus 8 ~~ILivdd~~~~~~~l~~~L~~~g~~----~~v~-~~~~~~~a~~~l~~~~~~~~~~~dlii~D~ 67 (143)
T 2qvg_A 8 VDILYLEDDEVDIQSVERVFHKISSL----IKIE-IAKSGNQALDMLYGRNKENKIHPKLILLDI 67 (143)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHHCTT----CCEE-EESSHHHHHHHHHTCTTCCCCCCSEEEEET
T ss_pred CeEEEEeCCHHHHHHHHHHHHHhCCC----ceEE-EECCHHHHHHHHHhcccccCCCCCEEEEec
Confidence 35899999999999999999977651 1232 345555555544321 15799999996
No 458
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=70.37 E-value=16 Score=32.34 Aligned_cols=123 Identities=12% Similarity=0.066 Sum_probs=66.9
Q ss_pred HHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCcccEEEeCC-C---
Q 019408 10 RYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFDLIDIDS-F--- 79 (341)
Q Consensus 10 r~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fDvIdlDP-y--- 79 (341)
+++. .|+ +|+++|.+++..+-+.+-++..+- .++.++..|+ .+++.+....-.+.|+++-.- +
T Consensus 27 ~la~-~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~ 99 (256)
T 4fs3_A 27 VLDQ-LGA-KLVFTYRKERSRKELEKLLEQLNQ-----PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANM 99 (256)
T ss_dssp HHHH-TTC-EEEEEESSGGGHHHHHHHHGGGTC-----SSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCG
T ss_pred HHHH-CCC-EEEEEECCHHHHHHHHHHHHhcCC-----CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccc
Confidence 3344 587 599999998887777666654332 2344555543 333433333234678776542 1
Q ss_pred ----CC-----CHHHH--------------HHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhH
Q 019408 80 ----GS-----DSSFL--------------RTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGL 136 (341)
Q Consensus 80 ----gs-----p~~fl--------------d~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~l 136 (341)
+. ...|. ..++..++++|-+..+++- .|..+...+--|+++- -++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~----~~~~~~~~~~~Y~asK--------aal 167 (256)
T 4fs3_A 100 EDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL----GGEFAVQNYNVMGVAK--------ASL 167 (256)
T ss_dssp GGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG----GGTSCCTTTHHHHHHH--------HHH
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc----ccccCcccchhhHHHH--------HHH
Confidence 11 01121 1334456677776655542 2333444444565433 677
Q ss_pred HHHHHHHHHHHHhcC
Q 019408 137 RMLIGGAVREASAQG 151 (341)
Q Consensus 137 R~ll~~i~~~Aa~~~ 151 (341)
.-|...++.+-+.+|
T Consensus 168 ~~ltr~lA~Ela~~g 182 (256)
T 4fs3_A 168 EANVKYLALDLGPDN 182 (256)
T ss_dssp HHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHhCccC
Confidence 778888877777665
No 459
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=70.34 E-value=28 Score=25.73 Aligned_cols=52 Identities=8% Similarity=-0.003 Sum_probs=36.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++.++..+. .+. ...+....+..... ..+|+|++|-
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~------~v~-~~~~~~~~~~~~~~--~~~dlvi~d~ 54 (122)
T 1zgz_A 3 HHIVIVEDEPVTQARLQSYFTQEGY------TVS-VTASGAGLREIMQN--QSVDLILLDI 54 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred cEEEEEECCHHHHHHHHHHHHHCCC------eEE-EecCHHHHHHHHhc--CCCCEEEEeC
Confidence 3689999999999999999987665 232 34455555543322 3699999996
No 460
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=70.33 E-value=7.5 Score=37.51 Aligned_cols=38 Identities=8% Similarity=0.048 Sum_probs=32.7
Q ss_pred ccccHhHHHHh-hhCC-CCEEEEeeCCHHHHHHHHHHHHH
Q 019408 2 CGCGIRSLRYL-AEAK-ADFVMANDGNDAHRRVILGNLKS 39 (341)
Q Consensus 2 agsG~rgir~a-~e~g-a~~V~~~Dis~~A~~~i~~N~~~ 39 (341)
|+.|..++.++ ...+ ..+|+++|-+|.+++.+++|++.
T Consensus 235 An~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 235 ASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 57899999988 3233 47999999999999999999998
No 461
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=69.85 E-value=4.8 Score=28.57 Aligned_cols=45 Identities=16% Similarity=0.309 Sum_probs=35.6
Q ss_pred HHHHHHHhhcccCCCCCCcceehhHHHhhcCCCCCCHHHHHHHHHHCCCEE
Q 019408 259 LEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVA 309 (341)
Q Consensus 259 ~~~ll~~~~~e~~~~~pp~yy~~~~l~~~~k~~~p~~~~~~~~L~~~Gy~a 309 (341)
-.++|+.+.+. + . ..+..+||..++++-+.....++.|++.||-.
T Consensus 12 ~~~IL~~L~~~---~-~--~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~ 56 (67)
T 2heo_A 12 EQKILQVLSDD---G-G--PVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVS 56 (67)
T ss_dssp HHHHHHHHHHH---C-S--CEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHc---C-C--CcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEe
Confidence 34677777632 1 2 37999999999999888899999999999943
No 462
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=69.79 E-value=18 Score=32.81 Aligned_cols=71 Identities=10% Similarity=-0.005 Sum_probs=42.2
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHH------HHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANR------VLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~------~l~~~~~~~~~fD 72 (341)
.|+|..|...+++ .|+ +|++.|.+++..+.+.+.++..+. .++.++..|..+ ++.+....-...|
T Consensus 48 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 48 GGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGA-----GNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSS-----SCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCC-----CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3667677665543 576 699999998877766665553331 245566666543 2333222223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 122 ~lvnnA 127 (293)
T 3rih_A 122 VVCANA 127 (293)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 463
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=69.76 E-value=4.8 Score=33.84 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=44.7
Q ss_pred ceehhHHHhhcCCCCCCHHHHHHHHHHCCCEEeeeecCCCceecCCCHHH--HHHHHHhhh
Q 019408 278 YIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMVA--CIRIAKELQ 336 (341)
Q Consensus 278 yy~~~~l~~~~k~~~p~~~~~~~~L~~~Gy~as~tH~~~~~iKTdAp~~~--i~~i~~~~~ 336 (341)
..+..+||..++++.+-+.+++..|+++||-.|..-- ..|++=..|+++ +.||++.+-
T Consensus 28 ~~s~~~IA~~~~is~~~l~kil~~L~~aGlv~s~rG~-~GGy~Lar~p~~Itl~dIi~ave 87 (162)
T 3k69_A 28 KVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVGK-NGGYQLDLALADMNLGDLYDLTI 87 (162)
T ss_dssp CBCHHHHHHHHTSCGGGTHHHHHHHHHTTSSEEECST-TCEEECCSCGGGSBHHHHHHHHS
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeecCC-CCCeEecCChhhCcHHHHHHHHc
Confidence 4799999999999999999999999999996554332 236887777666 566666553
No 464
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=69.75 E-value=3 Score=39.17 Aligned_cols=91 Identities=14% Similarity=0.028 Sum_probs=58.8
Q ss_pred ccccHhHHHHhhhCCCCEEEEeeCCHHHHH------HHHHHHHHcCCCCCCCccEEEEec-cHHHHHHHhhhcCCcccEE
Q 019408 2 CGCGIRSLRYLAEAKADFVMANDGNDAHRR------VILGNLKSIERGSGDEKRWVVTHF-DANRVLSECYLKREFFDLI 74 (341)
Q Consensus 2 agsG~rgir~a~e~ga~~V~~~Dis~~A~~------~i~~N~~~n~~~~~~~~~~~v~~~-DA~~~l~~~~~~~~~fDvI 74 (341)
||.|..+-.++...|+.+|+++|+-..--+ .+-. +-+++..+ |++. ...+++|+|
T Consensus 103 aapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w------------~lV~~~~~~Dv~~------l~~~~~D~i 164 (321)
T 3lkz_A 103 CGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGW------------NIVTMKSGVDVFY------RPSECCDTL 164 (321)
T ss_dssp CTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTG------------GGEEEECSCCTTS------SCCCCCSEE
T ss_pred CCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCC------------cceEEEeccCHhh------CCCCCCCEE
Confidence 688999998888889999999999754111 1111 12445554 7632 223679999
Q ss_pred EeCC-CCCCHHHHHH-----HH----HhcccC-CEEEEEecCCCCCCCCCch
Q 019408 75 DIDS-FGSDSSFLRT-----VF----NAVKRD-GLLYLTSTDGYSSGGHRPN 115 (341)
Q Consensus 75 dlDP-ygsp~~fld~-----al----~~v~~g-GlL~vt~TD~~~l~g~~~~ 115 (341)
..|= =.+|.+.+|. +| +.+++| |-.|+ -+||+..|+
T Consensus 165 vcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-----KVl~pY~~~ 211 (321)
T 3lkz_A 165 LCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-----KVLCPYMPK 211 (321)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-----EESCTTSHH
T ss_pred EEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-----EEcCCCChH
Confidence 9997 5566777763 23 446777 76665 356874443
No 465
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=69.74 E-value=22 Score=31.89 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=66.8
Q ss_pred HHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCcccEEEeCC-----
Q 019408 10 RYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFDLIDIDS----- 78 (341)
Q Consensus 10 r~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fDvIdlDP----- 78 (341)
+++. .|+ +|+++|.+++..+-+.+-++..+. ++..++.|+ .+++.+...+-.+-|+++-.-
T Consensus 26 ~la~-~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~------~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~ 97 (254)
T 4fn4_A 26 KFAL-NDS-IVVAVELLEDRLNQIVQELRGMGK------EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDG 97 (254)
T ss_dssp HHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCT
T ss_pred HHHH-cCC-EEEEEECCHHHHHHHHHHHHhcCC------cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCC
Confidence 4444 476 589999999999888888876553 344555553 333333333223578876432
Q ss_pred CCC----CHHHH---------------HHHHHhcc--cCCEEEEEecCCCCCCCCCchhHHhhhccccCCCCCchhhhHH
Q 019408 79 FGS----DSSFL---------------RTVFNAVK--RDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMPYSNEIGLR 137 (341)
Q Consensus 79 ygs----p~~fl---------------d~al~~v~--~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~~~~E~~lR 137 (341)
++. +.+.. ..++..++ .+|-+...++- .|..+....--|+++- -|+.
T Consensus 98 ~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~----~g~~~~~~~~~Y~asK--------aal~ 165 (254)
T 4fn4_A 98 VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI----AGIRGGFAGAPYTVAK--------HGLI 165 (254)
T ss_dssp TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGTCSSSSCHHHHHHH--------HHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech----hhcCCCCCChHHHHHH--------HHHH
Confidence 221 11111 14444442 24544433432 2222222333455432 6778
Q ss_pred HHHHHHHHHHHhcCCcE
Q 019408 138 MLIGGAVREASAQGYHV 154 (341)
Q Consensus 138 ~ll~~i~~~Aa~~~~~i 154 (341)
-|-..++.+-+.+|+.+
T Consensus 166 ~ltr~lA~ela~~gIrV 182 (254)
T 4fn4_A 166 GLTRSIAAHYGDQGIRA 182 (254)
T ss_dssp HHHHHHHHHHGGGTEEE
T ss_pred HHHHHHHHHhhhhCeEE
Confidence 88888888877775443
No 466
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=69.61 E-value=35 Score=25.98 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=39.8
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
..+|..+|-++...+.++.-++..+. .+ ....+..+.+..... ...+|+|++|-
T Consensus 15 ~~~ilivdd~~~~~~~l~~~L~~~g~------~v-~~~~~~~~al~~l~~-~~~~dlvilD~ 68 (138)
T 2b4a_A 15 PFRVTLVEDEPSHATLIQYHLNQLGA------EV-TVHPSGSAFFQHRSQ-LSTCDLLIVSD 68 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC------EE-EEESSHHHHHHTGGG-GGSCSEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCC------EE-EEeCCHHHHHHHHHh-CCCCCEEEEeC
Confidence 45799999999999999999987665 33 245666666654432 04699999996
No 467
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=69.42 E-value=12 Score=28.81 Aligned_cols=52 Identities=10% Similarity=0.031 Sum_probs=39.2
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...|..+.+.... ...||+|++|-
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~--~~~~dlvi~D~ 58 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPLDV------TIQ-CFASAESFMRQQI--SDDAIGMIIEA 58 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSS------EEE-EESSHHHHTTSCC--CTTEEEEEEET
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCc------EEE-EeCCHHHHHHHHh--ccCCCEEEEeC
Confidence 4799999999999999998876554 333 4567777765442 35699999996
No 468
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=69.34 E-value=20 Score=31.97 Aligned_cols=69 Identities=9% Similarity=-0.039 Sum_probs=42.4
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|+|..|...+.+ .|+ +|++.|.+++..+.+.+.++..+. ++.++..|. .+++...... ...|
T Consensus 40 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD 111 (275)
T 4imr_A 40 GSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGG------TAQELAGDLSEAGAGTDLIERAEAI-APVD 111 (275)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTC------CEEEEECCTTSTTHHHHHHHHHHHH-SCCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCC------eEEEEEecCCCHHHHHHHHHHHHHh-CCCC
Confidence 3566667665543 576 699999998877777766654432 345555554 3344433333 4689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 112 ~lvnnA 117 (275)
T 4imr_A 112 ILVINA 117 (275)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 469
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=69.28 E-value=33 Score=25.58 Aligned_cols=52 Identities=17% Similarity=0.095 Sum_probs=39.2
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++.-++..+. .+. ...|..+.+.... ...+|+|++|-
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~al~~~~--~~~~dlii~D~ 54 (120)
T 3f6p_A 3 KKILVVDDEKPIADILEFNLRKEGY------EVH-CAHDGNEAVEMVE--ELQPDLILLDI 54 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHH--TTCCSEEEEET
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCE------EEE-EeCCHHHHHHHHh--hCCCCEEEEeC
Confidence 4689999999999999999987765 232 3556666665543 34799999996
No 470
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=69.16 E-value=38 Score=29.43 Aligned_cols=66 Identities=12% Similarity=0.045 Sum_probs=38.8
Q ss_pred cccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCcccE
Q 019408 3 GCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFDL 73 (341)
Q Consensus 3 gsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fDv 73 (341)
|||..|...+.+ .|+ +|++.|.+++..+.+.+.+ + .++.++..|. .+++.+....-.+.|+
T Consensus 17 as~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 17 AGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI---G------DAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C------TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---C------CceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 566666655543 575 5999999998877666643 2 2344555543 3333333222236798
Q ss_pred EEeCC
Q 019408 74 IDIDS 78 (341)
Q Consensus 74 IdlDP 78 (341)
++.-.
T Consensus 87 li~~A 91 (261)
T 3n74_A 87 LVNNA 91 (261)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 87654
No 471
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=68.97 E-value=60 Score=28.51 Aligned_cols=128 Identities=16% Similarity=0.063 Sum_probs=65.6
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|+++|.+++..+.+.+.+. .++.++..|.. +++......-.+.|
T Consensus 13 Gas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 13 GAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE---------AEAIAVVADVSDPKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC---------SSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc---------CceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 3677777666553 575 69999999877655443221 13445555532 23333222223578
Q ss_pred EEEeCC-------CCC-C-HHH--------------HHHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCCCC
Q 019408 73 LIDIDS-------FGS-D-SSF--------------LRTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILPMP 129 (341)
Q Consensus 73 vIdlDP-------ygs-p-~~f--------------ld~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~~~ 129 (341)
+|+--- +.. + ..+ +..++..++.+|-+...+|-.+ . +.....-|+++-
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~----~-~~~~~~~Y~asK---- 153 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG----L-GAFGLAHYAAGK---- 153 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT----C-CHHHHHHHHHCS----
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh----c-CCCCcHHHHHHH----
Confidence 887532 110 1 111 1233444443566665555322 2 334455666543
Q ss_pred CchhhhHHHHHHHHHHHHHhcCC
Q 019408 130 YSNEIGLRMLIGGAVREASAQGY 152 (341)
Q Consensus 130 ~~~E~~lR~ll~~i~~~Aa~~~~ 152 (341)
.++..+...++++.+.+|.
T Consensus 154 ----~a~~~~~~~la~e~~~~gi 172 (263)
T 2a4k_A 154 ----LGVVGLARTLALELARKGV 172 (263)
T ss_dssp ----SHHHHHHHHHHHHHTTTTC
T ss_pred ----HHHHHHHHHHHHHhhhhCc
Confidence 4666677777766655543
No 472
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=68.94 E-value=32 Score=25.41 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=37.3
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.++..++..+. .+. ...+....+..... ..+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~------~v~-~~~~~~~a~~~~~~--~~~dlvi~D~ 55 (123)
T 1xhf_A 4 PHILIVEDELVTRNTLKSIFEAEGY------DVF-EATDGAEMHQILSE--YDINLVIMDI 55 (123)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTC------EEE-EESSHHHHHHHHHH--SCCSEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHHhhCCc------EEE-EeCCHHHHHHHHhc--CCCCEEEEcC
Confidence 4689999999999999999986554 232 34555555544422 4689999996
No 473
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=68.81 E-value=34 Score=25.66 Aligned_cols=56 Identities=20% Similarity=0.094 Sum_probs=39.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc-----CCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK-----REFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~-----~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+.. ..+ ....+..+.+...... ...+|+|++|-
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~----~~v-~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~ 63 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVP----HEV-VTVRDGMEAMAYLRQEGEYANASRPDLILLXL 63 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSC----CEE-EEECSHHHHHHHHTTCGGGGSCCCCSEEEECS
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCC----ceE-EEECCHHHHHHHHHcccccccCCCCcEEEEec
Confidence 46899999999999999999876541 122 3455666666554321 15799999996
No 474
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=68.79 E-value=14 Score=31.28 Aligned_cols=55 Identities=24% Similarity=0.185 Sum_probs=38.7
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc-----------CCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK-----------REFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~-----------~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+.. .+ ....|..+.+..+... +..||+|++|-
T Consensus 62 ~~ILiVdDd~~~~~~l~~~L~~~g~~-----~v-~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~ 127 (206)
T 3mm4_A 62 KRVLVVDDNFISRKVATGKLKKMGVS-----EV-EQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDC 127 (206)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCS-----EE-EEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEES
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCC-----ee-eeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcC
Confidence 47999999999999999999887651 22 2344555555443221 23799999995
No 475
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=68.61 E-value=42 Score=28.01 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=37.5
Q ss_pred EEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 19 FVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 19 ~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
+|..+|-++...+.++.-++..+. .+. ...|..+.+..... ..+|+|++|-
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~~~~--~~~dlvllD~ 54 (225)
T 1kgs_A 4 RVLVVEDERDLADLITEALKKEMF------TVD-VCYDGEEGMYMALN--EPFDVVILDI 54 (225)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCC------EEE-EECCHHHHHHHHhc--CCCCEEEEeC
Confidence 688999999999999999987655 332 45566665554432 4699999996
No 476
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=68.47 E-value=49 Score=27.30 Aligned_cols=78 Identities=14% Similarity=0.029 Sum_probs=48.9
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC--C-CCHHHHHHHHHhcc
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF--G-SDSSFLRTVFNAVK 94 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy--g-sp~~fld~al~~v~ 94 (341)
.+|..+|-++...+.++.-++..+. .+.....+..+.+..... ..+|+|++|-. + ....++. .++...
T Consensus 14 ~~iLivdd~~~~~~~l~~~L~~~g~------~v~~~~~~~~~al~~~~~--~~~dlvi~D~~~p~~~g~~~~~-~l~~~~ 84 (205)
T 1s8n_A 14 RRVLIAEDEALIRMDLAEMLREEGY------EIVGEAGDGQEAVELAEL--HKPDLVIMDVKMPRRDGIDAAS-EIASKR 84 (205)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTC------EEEEEESSHHHHHHHHHH--HCCSEEEEESSCSSSCHHHHHH-HHHHTT
T ss_pred ccEEEEECCHHHHHHHHHHHHHCCC------EEEEEeCCHHHHHHHHhh--cCCCEEEEeCCCCCCChHHHHH-HHHhcC
Confidence 4799999999999999999987655 232245555555544322 36999999962 1 2223333 233333
Q ss_pred cCCEEEEEec
Q 019408 95 RDGLLYLTST 104 (341)
Q Consensus 95 ~gGlL~vt~T 104 (341)
+.-++.+|+.
T Consensus 85 ~~pii~lt~~ 94 (205)
T 1s8n_A 85 IAPIVVLTAF 94 (205)
T ss_dssp CSCEEEEEEG
T ss_pred CCCEEEEecC
Confidence 4467777665
No 477
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=68.45 E-value=42 Score=28.94 Aligned_cols=67 Identities=6% Similarity=-0.221 Sum_probs=39.1
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+.+. ..+.++..|. .+++.+........|
T Consensus 10 Gas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 10 GAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLG---------NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc---------CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence 3667777665543 576 59999999988776666542 1344455443 233333322223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++.-.
T Consensus 80 ~lvnnA 85 (235)
T 3l6e_A 80 LVLHCA 85 (235)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 887554
No 478
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=68.22 E-value=35 Score=29.81 Aligned_cols=70 Identities=9% Similarity=0.043 Sum_probs=41.6
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+.+.+-++..+ .++.++..|.. +++.+....-...|
T Consensus 13 Gas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 13 GGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP------GQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST------TCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3666667665543 576 59999999988877766554322 24555665543 33333322223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 86 ~lv~nA 91 (257)
T 3imf_A 86 ILINNA 91 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887643
No 479
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=68.01 E-value=16 Score=34.45 Aligned_cols=88 Identities=13% Similarity=0.079 Sum_probs=48.3
Q ss_pred cccHhHH---HHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC
Q 019408 3 GCGIRSL---RYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF 79 (341)
Q Consensus 3 gsG~rgi---r~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy 79 (341)
|.|..|. +.++..|+ +|++.|.+++..+.+++. .+. .+.+...+...+ .+.. ..+|+|+.=..
T Consensus 173 GaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~---~g~------~~~~~~~~~~~l-~~~~---~~~DvVi~~~g 238 (369)
T 2eez_A 173 GGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDV---FGG------RVITLTATEANI-KKSV---QHADLLIGAVL 238 (369)
T ss_dssp CCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---TTT------SEEEEECCHHHH-HHHH---HHCSEEEECCC
T ss_pred CCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cCc------eEEEecCCHHHH-HHHH---hCCCEEEECCC
Confidence 3355554 44555688 799999999887766542 232 222222222222 1111 15798866542
Q ss_pred CC--CHHH--HHHHHHhcccCCEEEEEec
Q 019408 80 GS--DSSF--LRTVFNAVKRDGLLYLTST 104 (341)
Q Consensus 80 gs--p~~f--ld~al~~v~~gGlL~vt~T 104 (341)
.. ..++ ...+++.+++||.+..++.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC-
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEec
Confidence 21 1112 4677889999999887664
No 480
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=67.88 E-value=4.9 Score=37.59 Aligned_cols=86 Identities=10% Similarity=0.093 Sum_probs=49.0
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHH---HHHHHHHHHHHcCCCCCCCccEEEEeccHH--HHHHHhhhcCCcccEEEeC
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDA---HRRVILGNLKSIERGSGDEKRWVVTHFDAN--RVLSECYLKREFFDLIDID 77 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~---A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~--~~l~~~~~~~~~fDvIdlD 77 (341)
+.|..++.+|+..|++.|..+|.++. ..+.++ ..|.+ . ++..+-. .-+.+.......+|+| +|
T Consensus 179 ~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~-----~--vi~~~~~~~~~~~~~~~~~~~~Dvv-id 246 (357)
T 1zsy_A 179 GVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE-----H--VITEEELRRPEMKNFFKDMPQPRLA-LN 246 (357)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS-----E--EEEHHHHHSGGGGGTTSSSCCCSEE-EE
T ss_pred HHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc-----E--EEecCcchHHHHHHHHhCCCCceEE-EE
Confidence 56777788888789877777776543 234443 35542 2 2322110 1111111111148876 57
Q ss_pred CCCCCHHHHHHHHHhcccCCEEEEE
Q 019408 78 SFGSDSSFLRTVFNAVKRDGLLYLT 102 (341)
Q Consensus 78 Pygsp~~fld~al~~v~~gGlL~vt 102 (341)
.-|. +....++++++++|-+.+.
T Consensus 247 ~~g~--~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 247 CVGG--KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SSCH--HHHHHHHTTSCTTCEEEEC
T ss_pred CCCc--HHHHHHHHhhCCCCEEEEE
Confidence 7664 4445789999999998864
No 481
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=67.73 E-value=4.2 Score=30.19 Aligned_cols=46 Identities=15% Similarity=0.274 Sum_probs=37.8
Q ss_pred HHHHHHHhhcccCCCCCCcceehhHHHhhcCCCCCCHHHHHHHHHHCCCEEeee
Q 019408 259 LEKLLSRMIDESDPRLPFGYIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRS 312 (341)
Q Consensus 259 ~~~ll~~~~~e~~~~~pp~yy~~~~l~~~~k~~~p~~~~~~~~L~~~Gy~as~t 312 (341)
+..+++.+.+. ...++.+|+..++++...+...++.|.+.|+ +.|+
T Consensus 4 L~~Il~~L~~~-------g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~-l~R~ 49 (78)
T 1xn7_A 4 LIQVRDLLALR-------GRMEAAQISQTLNTPQPMINAMLQQLESMGK-AVRI 49 (78)
T ss_dssp HHHHHHHHHHS-------CSBCHHHHHHHTTCCHHHHHHHHHHHHHHTS-EEEE
T ss_pred HHHHHHHHHHc-------CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCC-EEEe
Confidence 55677777632 2588999999999999999999999999997 5676
No 482
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=67.42 E-value=38 Score=29.81 Aligned_cols=70 Identities=7% Similarity=-0.087 Sum_probs=41.5
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEEeccH------HHHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVTHFDA------NRVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~f 71 (341)
.|+|..|...+.. .|+ +|++.|.+++..+.+.+.++. .+ .++.++..|. .+++.+....-.+.
T Consensus 27 Gas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 99 (266)
T 4egf_A 27 GATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFG------TDVHTVAIDLAEPDAPAELARRAAEAFGGL 99 (266)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC------CCEEEEECCTTSTTHHHHHHHHHHHHHTSC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3566666655543 576 599999999888777766654 22 2445555553 23333332222367
Q ss_pred cEEEeCC
Q 019408 72 DLIDIDS 78 (341)
Q Consensus 72 DvIdlDP 78 (341)
|+++.-.
T Consensus 100 d~lv~nA 106 (266)
T 4egf_A 100 DVLVNNA 106 (266)
T ss_dssp SEEEEEC
T ss_pred CEEEECC
Confidence 9887654
No 483
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=67.33 E-value=28 Score=31.11 Aligned_cols=67 Identities=9% Similarity=0.008 Sum_probs=37.4
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|+|..|...+.+ .|+ +|+++|.+++..+.+.+.+ +. ++.++..|. .+++.+....-...|
T Consensus 36 Gas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 36 GAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI---GC------GAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CS------SCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CC------cceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3566666555443 576 6999999988777665544 21 234444443 233333322223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 106 ~lvnnA 111 (277)
T 3gvc_A 106 KLVANA 111 (277)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887543
No 484
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=67.14 E-value=15 Score=34.59 Aligned_cols=90 Identities=10% Similarity=0.010 Sum_probs=51.9
Q ss_pred cccHhHHHHhhhCCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCCC--
Q 019408 3 GCGIRSLRYLAEAKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSFG-- 80 (341)
Q Consensus 3 gsG~rgir~a~e~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPyg-- 80 (341)
|.|...++.++..|+ +|++.|.+++..+.+++-.. ..+.+...+...+.... ..+|+|+-=...
T Consensus 177 gvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~---------~~~~~~~~~~~~~~~~~----~~~DvVI~~~~~~~ 242 (361)
T 1pjc_A 177 VVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFG---------SRVELLYSNSAEIETAV----AEADLLIGAVLVPG 242 (361)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG---------GGSEEEECCHHHHHHHH----HTCSEEEECCCCTT
T ss_pred HHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhC---------ceeEeeeCCHHHHHHHH----cCCCEEEECCCcCC
Confidence 344445666666788 89999999988887765332 12222222222222221 158988533211
Q ss_pred CCHHH--HHHHHHhcccCCEEEEEecCC
Q 019408 81 SDSSF--LRTVFNAVKRDGLLYLTSTDG 106 (341)
Q Consensus 81 sp~~f--ld~al~~v~~gGlL~vt~TD~ 106 (341)
.+.+. .+.+++.+++||.++..+.+.
T Consensus 243 ~~~~~li~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 243 RRAPILVPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp SSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred CCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence 11122 456788999999998766543
No 485
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=67.13 E-value=22 Score=31.41 Aligned_cols=70 Identities=11% Similarity=-0.001 Sum_probs=42.5
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeC-CHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDG-NDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Di-s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~f 71 (341)
.|+|..|...+.+ .|+ +|++.+. +++..+.+.+-++..+. ++.++..|.. +++.+......+.
T Consensus 36 Gas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 108 (271)
T 4iin_A 36 GASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGY------KAAVIKFDAASESDFIEAIQTIVQSDGGL 108 (271)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC------CEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC------ceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3667777666554 576 5788887 67777777776665543 4556665543 3333332222368
Q ss_pred cEEEeCC
Q 019408 72 DLIDIDS 78 (341)
Q Consensus 72 DvIdlDP 78 (341)
|+++.-.
T Consensus 109 d~li~nA 115 (271)
T 4iin_A 109 SYLVNNA 115 (271)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9887665
No 486
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=67.13 E-value=41 Score=29.29 Aligned_cols=71 Identities=8% Similarity=-0.038 Sum_probs=41.5
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH--------HHHHHHhhhcCCc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA--------NRVLSECYLKREF 70 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA--------~~~l~~~~~~~~~ 70 (341)
.|+|..|...+.+ .|+ +|++.|.+++..+.+.+.++..+- .++.++..|. .+++........+
T Consensus 19 Gas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~ 92 (252)
T 3f1l_A 19 GASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETG-----RQPQWFILDLLTCTSENCQQLAQRIAVNYPR 92 (252)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-----CCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC-----CCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence 3566666655443 576 699999999888777766654321 1334444444 3334433333346
Q ss_pred ccEEEeCC
Q 019408 71 FDLIDIDS 78 (341)
Q Consensus 71 fDvIdlDP 78 (341)
.|+++.-.
T Consensus 93 id~lv~nA 100 (252)
T 3f1l_A 93 LDGVLHNA 100 (252)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89887543
No 487
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=67.05 E-value=60 Score=28.22 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=40.1
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|||..|-..+.+ .|+ +|++.|.+++..+.+.+.++...- ..++.++..|.. +++.+...... .|
T Consensus 14 Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id 87 (260)
T 2z1n_A 14 AGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVS----GAQVDIVAGDIREPGDIDRLFEKARDLGG-AD 87 (260)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHST----TCCEEEEECCTTCHHHHHHHHHHHHHTTC-CS
T ss_pred CCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC----CCeEEEEEccCCCHHHHHHHHHHHHHhcC-CC
Confidence 3667777666543 576 699999998877766665553200 013455555542 33333322222 78
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+.-.
T Consensus 88 ~lv~~A 93 (260)
T 2z1n_A 88 ILVYST 93 (260)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 488
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=66.66 E-value=44 Score=29.67 Aligned_cols=67 Identities=7% Similarity=-0.117 Sum_probs=38.9
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|++.|.+++..+-+.+.+. .++.++..|. .+++.+....-.+.|
T Consensus 35 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 35 GAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIG---------DDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHT---------SCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC---------CCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4667777665553 576 59999999887776655442 1233444443 333333322223689
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 105 ~lVnnA 110 (272)
T 4dyv_A 105 VLFNNA 110 (272)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 489
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=66.64 E-value=21 Score=27.96 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=39.0
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhc-----CCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLK-----REFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~-----~~~fDvIdlDP 78 (341)
-+|..+|-++...+.++..++..+.. ..+ ....|..+.+...... ...+|+|++|-
T Consensus 9 ~~ILivdd~~~~~~~l~~~L~~~~~~----~~v-~~~~~~~~al~~l~~~~~~~~~~~~dlillD~ 69 (149)
T 1i3c_A 9 KVILLVEDSKADSRLVQEVLKTSTID----HEL-IILRDGLAAMAFLQQQGEYENSPRPNLILLDL 69 (149)
T ss_dssp EEEEEECCCHHHHHHHHHHHHSCCSC----EEE-EEECSHHHHHHHHTTCGGGTTCCCCSEEEECS
T ss_pred CeEEEEECCHHHHHHHHHHHHhcCCC----ccE-EEeCCHHHHHHHHHhccccccCCCCCEEEEeC
Confidence 46899999999999999999865531 122 3455666666554321 14699999996
No 490
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=66.44 E-value=16 Score=28.14 Aligned_cols=53 Identities=15% Similarity=-0.006 Sum_probs=40.3
Q ss_pred CEEEEeeCCHHHHHHHHHHHHH-cCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKS-IERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~-n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++. .++ .+. ...|..+.+..... ...+|+|++|-
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~~~~------~v~-~~~~~~~a~~~l~~-~~~~dlvi~D~ 58 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNIGEY------DFI-EVENLKKFYSIFKD-LDSITLIIMDI 58 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCCC------EEE-EECSHHHHHTTTTT-CCCCSEEEECS
T ss_pred CeEEEEeCCHHHHHHHHHHHHhccCc------cEE-EECCHHHHHHHHhc-CCCCcEEEEeC
Confidence 4799999999999999999987 555 333 56677777765432 15799999997
No 491
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=65.93 E-value=39 Score=25.71 Aligned_cols=51 Identities=18% Similarity=0.104 Sum_probs=35.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++.. . .+. ...+..+.+..... ..+|+|++|-
T Consensus 4 ~~iLivdd~~~~~~~l~~~l~~~-~------~v~-~~~~~~~a~~~~~~--~~~dlvi~D~ 54 (140)
T 3n53_A 4 KKILIIDQQDFSRIELKNFLDSE-Y------LVI-ESKNEKEALEQIDH--HHPDLVILDM 54 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTT-S------EEE-EESSHHHHHHHHHH--HCCSEEEEET
T ss_pred CEEEEEeCCHHHHHHHHHHHHhc-c------eEE-EeCCHHHHHHHHhc--CCCCEEEEeC
Confidence 47899999999999999877644 3 222 34555555554432 3699999996
No 492
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=65.92 E-value=33 Score=30.66 Aligned_cols=70 Identities=7% Similarity=-0.148 Sum_probs=40.9
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~fD 72 (341)
.|+|..|...+.+ .|+ +|+++|.+++..+-+.+.++..+ .++.++..|.. +++......-...|
T Consensus 15 Gas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (280)
T 3tox_A 15 GASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGG------GEAAALAGDVGDEALHEALVELAVRRFGGLD 87 (280)
T ss_dssp STTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTT------CCEEECCCCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3566666655543 576 59999999988777766654322 24455555532 33333322223679
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+++--.
T Consensus 88 ~lvnnA 93 (280)
T 3tox_A 88 TAFNNA 93 (280)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887654
No 493
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=65.92 E-value=12 Score=29.01 Aligned_cols=54 Identities=9% Similarity=0.058 Sum_probs=37.6
Q ss_pred CCEEEEeeCCHHHHHHHHHHHHHcC-CCCCCCccEEEEeccHHHHHHHhhhcC-CcccEEEeCC
Q 019408 17 ADFVMANDGNDAHRRVILGNLKSIE-RGSGDEKRWVVTHFDANRVLSECYLKR-EFFDLIDIDS 78 (341)
Q Consensus 17 a~~V~~~Dis~~A~~~i~~N~~~n~-~~~~~~~~~~v~~~DA~~~l~~~~~~~-~~fDvIdlDP 78 (341)
..+|..+|-++...+.+++-++..+ + .+. ...+..+.+..... . ..+|+|++|-
T Consensus 20 ~~~ilivdd~~~~~~~l~~~L~~~g~~------~v~-~~~~~~~~~~~~~~-~~~~~dlvi~D~ 75 (146)
T 4dad_A 20 MINILVASEDASRLAHLARLVGDAGRY------RVT-RTVGRAAQIVQRTD-GLDAFDILMIDG 75 (146)
T ss_dssp GCEEEEECSCHHHHHHHHHHHHHHCSC------EEE-EECCCHHHHTTCHH-HHTTCSEEEEEC
T ss_pred CCeEEEEeCCHHHHHHHHHHHhhCCCe------EEE-EeCCHHHHHHHHHh-cCCCCCEEEEeC
Confidence 3579999999999999999998876 5 232 23444444433221 2 4799999997
No 494
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=65.65 E-value=49 Score=29.67 Aligned_cols=70 Identities=11% Similarity=-0.025 Sum_probs=41.1
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccH------HHHHHHhhhcCCccc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDA------NRVLSECYLKREFFD 72 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA------~~~l~~~~~~~~~fD 72 (341)
.|||..|...+.+ .|+ +|+++|.+++..+.+.+.++..+. ++.++..|. .+++......-...|
T Consensus 41 Gas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 113 (291)
T 3cxt_A 41 GASYGIGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAGI------NAHGYVCDVTDEDGIQAMVAQIESEVGIID 113 (291)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTC------CCEEEECCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC------eEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 3677777666543 576 699999999887776666654332 334455553 233333322223579
Q ss_pred EEEeCC
Q 019408 73 LIDIDS 78 (341)
Q Consensus 73 vIdlDP 78 (341)
+|+---
T Consensus 114 ~lvnnA 119 (291)
T 3cxt_A 114 ILVNNA 119 (291)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887643
No 495
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=65.52 E-value=66 Score=27.69 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=41.5
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeC-CHHHHHHHHHHHHHcCCCCCCCccEEEEeccHH------HHHHHhhhcCCcc
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDG-NDAHRRVILGNLKSIERGSGDEKRWVVTHFDAN------RVLSECYLKREFF 71 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Di-s~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~------~~l~~~~~~~~~f 71 (341)
.|||..|...+.+ .|+ +|+++|. +++..+.+.+.++..+ .++.++..|.. +++.+....-...
T Consensus 14 GasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (261)
T 1gee_A 14 GSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVG------GEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT------CEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4677777766554 565 5899999 8877777766665432 24555666543 2233222222257
Q ss_pred cEEEeCC
Q 019408 72 DLIDIDS 78 (341)
Q Consensus 72 DvIdlDP 78 (341)
|+|+.-.
T Consensus 87 d~li~~A 93 (261)
T 1gee_A 87 DVMINNA 93 (261)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9887643
No 496
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=65.52 E-value=20 Score=27.02 Aligned_cols=52 Identities=12% Similarity=-0.042 Sum_probs=38.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCC
Q 019408 18 DFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDS 78 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDP 78 (341)
.+|..+|-++...+.+++-++..+. .+. ...|..+.+..... ..+|+|++|-
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~------~v~-~~~~~~~a~~~l~~--~~~dlii~d~ 58 (132)
T 3lte_A 7 KRILVVDDDQAMAAAIERVLKRDHW------QVE-IAHNGFDAGIKLST--FEPAIMTLDL 58 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC------EEE-EESSHHHHHHHHHH--TCCSEEEEES
T ss_pred ccEEEEECCHHHHHHHHHHHHHCCc------EEE-EeCCHHHHHHHHHh--cCCCEEEEec
Confidence 5799999999999999999987665 232 45566666554432 4699999996
No 497
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=65.46 E-value=15 Score=28.50 Aligned_cols=78 Identities=23% Similarity=0.195 Sum_probs=47.8
Q ss_pred CEEEEeeCCHHHHHHHHHHHHHc-CCCCCCCccEEEEeccHHHHHHHhhhcCCcccEEEeCCC---CCCHHHHHHHHHhc
Q 019408 18 DFVMANDGNDAHRRVILGNLKSI-ERGSGDEKRWVVTHFDANRVLSECYLKREFFDLIDIDSF---GSDSSFLRTVFNAV 93 (341)
Q Consensus 18 ~~V~~~Dis~~A~~~i~~N~~~n-~~~~~~~~~~~v~~~DA~~~l~~~~~~~~~fDvIdlDPy---gsp~~fld~al~~v 93 (341)
..|+.+|-++...+.+++-++.. +. .+.....|..+.+...... ..+|+|++|-. .....++.. ++..
T Consensus 14 ~~vlivdd~~~~~~~l~~~L~~~~~~------~~v~~~~~~~~al~~l~~~-~~~dlvilD~~l~~~~g~~~~~~-lr~~ 85 (145)
T 3kyj_B 14 YNVMIVDDAAMMRLYIASFIKTLPDF------KVVAQAANGQEALDKLAAQ-PNVDLILLDIEMPVMDGMEFLRH-AKLK 85 (145)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTCTTE------EEEEEESSHHHHHHHHHHC-TTCCEEEECTTSCCCTTCHHHHH-HHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHhCCCc------eEEEEECCHHHHHHHHhcC-CCCCEEEEeCCCCCCCHHHHHHH-HHhc
Confidence 57999999999999999988754 32 2222456666666554332 26999999962 222244443 3333
Q ss_pred ccCCEEEEEe
Q 019408 94 KRDGLLYLTS 103 (341)
Q Consensus 94 ~~gGlL~vt~ 103 (341)
.+-.++.++.
T Consensus 86 ~~~~iiil~~ 95 (145)
T 3kyj_B 86 TRAKICMLSS 95 (145)
T ss_dssp CCCEEC-CBS
T ss_pred CCCCeEEEEE
Confidence 3445556655
No 498
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=65.07 E-value=6.4 Score=32.25 Aligned_cols=57 Identities=16% Similarity=0.260 Sum_probs=44.3
Q ss_pred ceehhHHHhhcCCCCCCHHHHHHHHHHCCCEEeeeecCCCceecCCCHHH--HHHHHHhh
Q 019408 278 YIKLDEMASRAKMNSPSLKTMMSAVQKEGYVASRSHIASNAIKTNCPMVA--CIRIAKEL 335 (341)
Q Consensus 278 yy~~~~l~~~~k~~~p~~~~~~~~L~~~Gy~as~tH~~~~~iKTdAp~~~--i~~i~~~~ 335 (341)
..+..+||..++++.+-+.+++..|+++|+-.|.--- ..|++-.-|+++ +.||++..
T Consensus 28 ~~s~~~IA~~~~i~~~~l~kil~~L~~aGlv~s~rG~-~GGy~Lar~p~~Itl~dV~~av 86 (143)
T 3t8r_A 28 CISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGA-KGGYQLRVPAEEISAGDIIRLL 86 (143)
T ss_dssp CEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECSSS-SSEEEESSCGGGCBHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCEEEecCCC-CCCeeecCCcccCCHHHHHHHh
Confidence 3799999999999888889999999999996654332 247887777775 55666644
No 499
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=64.76 E-value=37 Score=28.93 Aligned_cols=35 Identities=3% Similarity=-0.081 Sum_probs=24.1
Q ss_pred ccccHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHH
Q 019408 2 CGCGIRSLRYLAE---AKADFVMANDGNDAHRRVILGNL 37 (341)
Q Consensus 2 agsG~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~ 37 (341)
.|||..|...+++ .|+. |++.|.+++..+.+.+.+
T Consensus 8 Gas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~ 45 (230)
T 3guy_A 8 GASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCL 45 (230)
T ss_dssp STTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTC
T ss_pred cCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHH
Confidence 4677777666553 5765 999999988776655433
No 500
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=64.71 E-value=61 Score=28.06 Aligned_cols=130 Identities=13% Similarity=0.054 Sum_probs=65.0
Q ss_pred cHhHHHHhhh---CCCCEEEEeeCCHHHHHHHHHHHHHcCCCCCCCccEEEEecc------HHHHHHHhhhcCCcccEEE
Q 019408 5 GIRSLRYLAE---AKADFVMANDGNDAHRRVILGNLKSIERGSGDEKRWVVTHFD------ANRVLSECYLKREFFDLID 75 (341)
Q Consensus 5 G~rgir~a~e---~ga~~V~~~Dis~~A~~~i~~N~~~n~~~~~~~~~~~v~~~D------A~~~l~~~~~~~~~fDvId 75 (341)
|..|...+.+ .|+ +|+++|.+....+.+++-.+..+ .+.++..| +.+++.+......+.|+++
T Consensus 26 ~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 97 (271)
T 3ek2_A 26 RSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-------SELVFPCDVADDAQIDALFASLKTHWDSLDGLV 97 (271)
T ss_dssp TSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-------CCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC-------CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5566555443 576 68999988665555555444332 12333433 3334444333334679887
Q ss_pred eCC-CC------------CCHHHH---------------HHHHHhcccCCEEEEEecCCCCCCCCCchhHHhhhccccCC
Q 019408 76 IDS-FG------------SDSSFL---------------RTVFNAVKRDGLLYLTSTDGYSSGGHRPNNSLASYGAYILP 127 (341)
Q Consensus 76 lDP-yg------------sp~~fl---------------d~al~~v~~gGlL~vt~TD~~~l~g~~~~~~~r~Yg~~~~~ 127 (341)
.-. +. .....+ ..++..++++|-+..+++-. +..+.....-|+++
T Consensus 98 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~----~~~~~~~~~~Y~as--- 170 (271)
T 3ek2_A 98 HSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG----AERAIPNYNTMGLA--- 170 (271)
T ss_dssp ECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGG----GTSBCTTTTHHHHH---
T ss_pred ECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccc----cccCCCCccchhHH---
Confidence 643 11 111111 23444555566555545422 22222223334432
Q ss_pred CCCchhhhHHHHHHHHHHHHHhcCCcE
Q 019408 128 MPYSNEIGLRMLIGGAVREASAQGYHV 154 (341)
Q Consensus 128 ~~~~~E~~lR~ll~~i~~~Aa~~~~~i 154 (341)
=.++..+...++++.+.++..+
T Consensus 171 -----Kaa~~~~~~~la~e~~~~gi~v 192 (271)
T 3ek2_A 171 -----KAALEASVRYLAVSLGAKGVRV 192 (271)
T ss_dssp -----HHHHHHHHHHHHHHHHTTTCEE
T ss_pred -----HHHHHHHHHHHHHHHHhcCcEE
Confidence 2567777777777776665444
Done!