BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019409
         (341 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O50533|HEMH_STRCO Probable ferrochelatase OS=Streptomyces coelicolor (strain ATCC
           BAA-471 / A3(2) / M145) GN=hemH PE=3 SV=1
          Length = 375

 Score = 37.0 bits (84), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 20/99 (20%)

Query: 248 IKKEVLKKGGQ-------LAAINLESRAALLAAKQGFAGAATK---YLGLRNMVALLGPV 297
           I KE LK+ GQ       ++ IN ++RA L A ++ FA        Y G RN        
Sbjct: 40  IPKERLKEVGQHYFLFGGVSPINDQNRALLDALRKDFAEHGLDLPVYWGNRN-------- 91

Query: 298 LWGTFLADVVIQMLGTDYARILR-AIYAFAQIRITRTYR 335
            W  +L D + +M+G    RIL  A  A+A     R YR
Sbjct: 92  -WAPYLTDTLREMVGDGRRRILVLATSAYASYSGCRQYR 129


>sp|P48676|PERI_XENLA Peripherin OS=Xenopus laevis GN=prph PE=2 SV=1
          Length = 456

 Score = 32.7 bits (73), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 178 YASEESGVFPGSWENSEASDAQNSLELGLSQWKVQALAAFNAGAVELKSMMLKLMRNLSG 237
           Y S+ + +   +  NSEA   Q   ++  S+ ++Q+L     G       +L+ M+N+  
Sbjct: 277 YKSKFADLSDAANRNSEAL-RQAKQDMNESRRQIQSLTCEVDGLKGTNEALLRQMKNMEE 335

Query: 238 KFFLEAANYQ 247
           +F +EAANYQ
Sbjct: 336 QFGMEAANYQ 345


>sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis
           GN=slc36a4 PE=2 SV=1
          Length = 522

 Score = 32.0 bits (71), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 38  RIGLSTVACTYVALSSKGQGAFDPELRS--VLELATDSELYELERILF 83
            IG++ V   Y++L++ G   F  +++    L L  DS LY+L +IL+
Sbjct: 328 NIGMAIVTTLYISLATLGYFCFGDQIKGSITLNLPQDSWLYQLVKILY 375


>sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo sapiens GN=TDRD6 PE=2 SV=2
          Length = 2096

 Score = 31.6 bits (70), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 18/123 (14%)

Query: 92   LKSFTKRADVDYVMIEQDLEEREDFIASLESRFLFLAADARSTLRGWRPSYRNVLLAVRK 151
            LK  + +A  + + +EQ  +E    +A +  + + +     S  R   P   N+     +
Sbjct: 1729 LKKLSNKAVQNKIYMEQQTDE----LAEITEKDVNIIGTKPSNFRD--PKTDNIC----E 1778

Query: 152  NLNIPCSSKLSTEDLEAEIFLHLLQEYASEE-------SGVFPGSWENSEASDAQNSLEL 204
                PC  K+ TE+LE E+  HL+ +   ++       + + P + E  E  +  NSLE+
Sbjct: 1779 GFENPCKDKIDTEELEGELECHLVDKAEFDDKYLITGFNTLLPHANETKEILEL-NSLEV 1837

Query: 205  GLS 207
             LS
Sbjct: 1838 PLS 1840


>sp|Q820C9|LNT_NITEU Apolipoprotein N-acyltransferase OS=Nitrosomonas europaea (strain
           ATCC 19718 / NBRC 14298) GN=lnt PE=3 SV=1
          Length = 497

 Score = 31.6 bits (70), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 225 KSMMLKLMRNL-SGKFFLEAANYQIKKEVLKKGGQLAAINLESRAALLAAKQGFAGAATK 283
           + + +  MR L +G++ L A N  +   + ++G  L  +++ + A L +  QGF G AT 
Sbjct: 407 QHLQISQMRALETGRYMLRATNTGVTAIIDERGRVLEQLDMFTTAGLHSTAQGF-GGATP 465

Query: 284 YLGLRN 289
           Y+   N
Sbjct: 466 YVRFGN 471


>sp|A5WG08|ASSY_PSYWF Argininosuccinate synthase OS=Psychrobacter sp. (strain PRwf-1)
           GN=argG PE=3 SV=1
          Length = 411

 Score = 31.6 bits (70), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 18/126 (14%)

Query: 127 LAADARST--LRGWRPSYRNVLLAVRKNLNIP----CSSKLSTEDLEAEIFLHLLQE--- 177
           LA D ++    R W  S R  L+A  K  NIP     + K S   ++A + LH+  E   
Sbjct: 141 LAPDVKTIAPWREWDLSSRESLMAYAKEHNIPIDFAANKKKSPYSMDANL-LHISYEGDI 199

Query: 178 ----YASEESGVFPGSWENSEASDAQNSLELGLSQWKVQALAAFNAGAVELKSMMLKLMR 233
               YA  E  ++  S    +A D    LEL   +++   + A N   +E   +M+KL  
Sbjct: 200 LEDPYAEAEDDMWRWSVSPEQAPDTPEYLEL---EYEKGDIVAINGEKLEPYEVMIKL-N 255

Query: 234 NLSGKF 239
            L GK 
Sbjct: 256 ELGGKH 261


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.375 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,867,401
Number of Sequences: 539616
Number of extensions: 4192502
Number of successful extensions: 11600
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 11597
Number of HSP's gapped (non-prelim): 16
length of query: 341
length of database: 191,569,459
effective HSP length: 118
effective length of query: 223
effective length of database: 127,894,771
effective search space: 28520533933
effective search space used: 28520533933
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)