Query 019410
Match_columns 341
No_of_seqs 196 out of 1652
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:39:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1j0a_A 1-aminocyclopropane-1-c 100.0 2E-46 6.7E-51 360.4 22.0 256 24-325 1-272 (325)
2 4d9b_A D-cysteine desulfhydras 100.0 1.8E-44 6.1E-49 349.5 21.2 264 25-325 13-291 (342)
3 1f2d_A 1-aminocyclopropane-1-c 100.0 3.2E-42 1.1E-46 333.2 20.1 260 32-325 3-285 (341)
4 4aec_A Cysteine synthase, mito 100.0 2E-41 6.9E-46 336.7 23.0 263 10-326 71-369 (430)
5 1tzj_A ACC deaminase, 1-aminoc 100.0 4.1E-41 1.4E-45 324.5 19.3 259 32-325 3-284 (338)
6 2egu_A Cysteine synthase; O-ac 100.0 2.7E-38 9.2E-43 301.5 22.8 234 39-325 7-257 (308)
7 3tbh_A O-acetyl serine sulfhyd 100.0 8.7E-38 3E-42 301.8 26.3 235 39-325 14-265 (334)
8 2q3b_A Cysteine synthase A; py 100.0 7.1E-38 2.4E-42 299.2 24.5 235 39-325 9-260 (313)
9 3dwg_A Cysteine synthase B; su 100.0 6.3E-38 2.2E-42 301.6 22.6 232 39-325 8-258 (325)
10 2v03_A Cysteine synthase B; py 100.0 2.5E-37 8.6E-42 294.4 26.3 232 39-325 3-246 (303)
11 1ve1_A O-acetylserine sulfhydr 100.0 1.2E-37 4.2E-42 296.4 23.4 233 40-325 3-254 (304)
12 1z7w_A Cysteine synthase; tran 100.0 1.2E-37 4.2E-42 298.8 22.8 235 39-325 8-260 (322)
13 1y7l_A O-acetylserine sulfhydr 100.0 1.9E-37 6.5E-42 296.6 23.7 235 39-325 6-263 (316)
14 3vc3_A Beta-cyanoalnine syntha 100.0 3.4E-37 1.2E-41 298.9 24.3 237 39-326 28-281 (344)
15 2pqm_A Cysteine synthase; OASS 100.0 2.8E-37 9.6E-42 299.2 23.0 235 39-325 16-271 (343)
16 3l6b_A Serine racemase; pyrido 100.0 3.4E-38 1.2E-42 306.0 16.2 232 39-325 18-276 (346)
17 4h27_A L-serine dehydratase/L- 100.0 1.4E-37 4.9E-42 303.6 20.6 234 39-325 39-296 (364)
18 3aey_A Threonine synthase; PLP 100.0 3.5E-37 1.2E-41 299.1 20.8 232 39-325 21-280 (351)
19 1p5j_A L-serine dehydratase; l 100.0 7.3E-37 2.5E-41 299.4 21.3 235 39-326 39-297 (372)
20 2d1f_A Threonine synthase; ami 100.0 4.6E-37 1.6E-41 299.4 19.4 233 39-325 31-289 (360)
21 2zsj_A Threonine synthase; PLP 100.0 7.9E-37 2.7E-41 296.7 19.2 232 39-325 23-282 (352)
22 1o58_A O-acetylserine sulfhydr 100.0 1.3E-36 4.6E-41 289.4 18.8 233 38-325 12-258 (303)
23 2rkb_A Serine dehydratase-like 100.0 9.8E-37 3.4E-41 291.9 18.0 228 44-325 5-256 (318)
24 2gn0_A Threonine dehydratase c 100.0 4.5E-37 1.5E-41 297.5 14.6 232 39-325 33-288 (342)
25 1v71_A Serine racemase, hypoth 100.0 9.9E-37 3.4E-41 292.6 15.9 232 39-325 19-274 (323)
26 3pc3_A CG1753, isoform A; CBS, 100.0 2.2E-35 7.5E-40 300.8 26.2 238 39-325 53-314 (527)
27 1ve5_A Threonine deaminase; ri 100.0 1.2E-36 4E-41 290.4 15.5 234 39-325 13-270 (311)
28 4d9i_A Diaminopropionate ammon 100.0 3.5E-35 1.2E-39 289.7 22.2 233 44-325 42-326 (398)
29 1jbq_A B, cystathionine beta-s 100.0 3.5E-35 1.2E-39 292.7 20.9 238 39-325 101-362 (435)
30 1tdj_A Biosynthetic threonine 100.0 2.3E-35 8E-40 298.7 14.2 240 31-325 16-279 (514)
31 3ss7_X D-serine dehydratase; t 100.0 2E-34 6.9E-39 288.0 19.6 243 36-325 68-377 (442)
32 3iau_A Threonine deaminase; py 100.0 2.1E-35 7.1E-40 288.4 11.9 238 33-325 47-308 (366)
33 1wkv_A Cysteine synthase; homo 100.0 2.9E-33 1E-37 275.4 21.1 230 45-325 95-332 (389)
34 1x1q_A Tryptophan synthase bet 100.0 3.3E-33 1.1E-37 277.4 16.7 239 45-325 76-365 (418)
35 1v8z_A Tryptophan synthase bet 100.0 1.4E-32 4.8E-37 269.7 19.3 238 45-325 49-336 (388)
36 1qop_B Tryptophan synthase bet 100.0 5.3E-32 1.8E-36 266.7 18.0 237 45-325 54-340 (396)
37 1e5x_A Threonine synthase; thr 100.0 7.2E-31 2.5E-35 265.1 17.1 231 39-324 123-394 (486)
38 2o2e_A Tryptophan synthase bet 100.0 3E-30 1E-34 256.4 19.5 238 45-325 80-367 (422)
39 1vb3_A Threonine synthase; PLP 99.9 2.2E-26 7.4E-31 229.1 11.2 199 101-323 103-343 (428)
40 4f4f_A Threonine synthase; str 99.9 1.2E-21 4E-26 196.6 17.8 177 47-284 94-288 (468)
41 1kl7_A Threonine synthase; thr 99.9 9E-21 3.1E-25 192.3 18.5 191 44-284 94-306 (514)
42 3v7n_A Threonine synthase; ssg 99.8 3.8E-20 1.3E-24 186.1 18.0 185 47-283 103-302 (487)
43 3d02_A Putative LACI-type tran 86.8 16 0.00055 32.2 16.3 160 110-280 51-223 (303)
44 3fwz_A Inner membrane protein 86.2 8.2 0.00028 30.8 10.9 31 122-154 8-38 (140)
45 3r2j_A Alpha/beta-hydrolase-li 84.9 10 0.00034 33.7 11.7 65 117-184 153-218 (227)
46 8abp_A L-arabinose-binding pro 84.7 17 0.00059 32.0 13.4 206 109-335 46-278 (306)
47 3gbv_A Putative LACI-family tr 84.2 21 0.00072 31.3 13.8 202 108-334 57-275 (304)
48 4fs3_A Enoyl-[acyl-carrier-pro 83.1 6.8 0.00023 34.8 9.9 35 120-155 6-41 (256)
49 4fn4_A Short chain dehydrogena 82.5 16 0.00053 32.9 12.1 56 120-184 7-62 (254)
50 3m9w_A D-xylose-binding peripl 81.9 14 0.00047 33.0 11.6 160 110-280 48-222 (313)
51 3pi7_A NADH oxidoreductase; gr 79.6 4.2 0.00015 37.8 7.4 63 109-183 153-215 (349)
52 1p9o_A Phosphopantothenoylcyst 77.8 6.9 0.00024 36.7 8.2 40 118-157 34-90 (313)
53 3gbc_A Pyrazinamidase/nicotina 77.4 3.9 0.00013 35.0 5.9 63 116-181 120-183 (186)
54 3pgx_A Carveol dehydrogenase; 77.4 18 0.00062 32.2 10.8 32 121-154 16-47 (280)
55 4g81_D Putative hexonate dehyd 76.7 19 0.00065 32.4 10.6 31 120-152 9-39 (255)
56 3v8e_A Nicotinamidase; hydrola 76.6 5.9 0.0002 34.8 7.0 64 117-181 150-214 (216)
57 2gk4_A Conserved hypothetical 76.4 3.2 0.00011 37.3 5.2 37 120-156 3-53 (232)
58 3t7c_A Carveol dehydrogenase; 75.9 44 0.0015 30.0 13.5 33 121-155 29-61 (299)
59 3uve_A Carveol dehydrogenase ( 75.2 28 0.00096 30.9 11.4 34 120-155 11-44 (286)
60 3c85_A Putative glutathione-re 74.5 31 0.0011 28.4 10.8 29 123-153 41-70 (183)
61 3gv0_A Transcriptional regulat 74.2 45 0.0015 29.2 19.8 35 245-281 187-225 (288)
62 3two_A Mannitol dehydrogenase; 73.3 7.2 0.00025 36.2 7.1 48 122-182 178-225 (348)
63 3v2g_A 3-oxoacyl-[acyl-carrier 73.2 43 0.0015 29.7 12.1 34 120-155 31-64 (271)
64 2wt9_A Nicotinamidase; hydrola 73.2 7.7 0.00026 34.4 7.0 64 117-182 163-227 (235)
65 4b4k_A N5-carboxyaminoimidazol 73.1 22 0.00074 30.6 9.3 86 232-329 67-153 (181)
66 1im5_A 180AA long hypothetical 72.9 6.1 0.00021 33.3 5.9 63 117-181 116-178 (180)
67 3r1i_A Short-chain type dehydr 72.7 41 0.0014 29.9 11.9 34 120-155 32-65 (276)
68 4iin_A 3-ketoacyl-acyl carrier 72.5 36 0.0012 30.0 11.4 32 123-155 31-62 (271)
69 3hut_A Putative branched-chain 72.3 42 0.0014 30.2 12.0 148 113-281 64-228 (358)
70 3k4h_A Putative transcriptiona 72.3 49 0.0017 28.8 20.1 34 245-280 191-228 (292)
71 3l9w_A Glutathione-regulated p 72.1 21 0.00071 34.5 10.3 50 122-184 5-54 (413)
72 4dmm_A 3-oxoacyl-[acyl-carrier 71.6 39 0.0013 29.9 11.4 31 122-154 30-60 (269)
73 3s55_A Putative short-chain de 71.6 53 0.0018 28.9 13.7 33 121-155 11-43 (281)
74 3pxx_A Carveol dehydrogenase; 71.6 52 0.0018 28.9 13.5 33 121-155 11-43 (287)
75 3u5t_A 3-oxoacyl-[acyl-carrier 71.6 40 0.0014 29.8 11.5 57 120-184 27-83 (267)
76 3oec_A Carveol dehydrogenase ( 71.3 60 0.0021 29.4 13.1 32 122-155 48-79 (317)
77 4gkb_A 3-oxoacyl-[acyl-carrier 70.5 59 0.002 29.0 12.3 55 120-184 7-61 (258)
78 1vp8_A Hypothetical protein AF 70.4 41 0.0014 29.3 10.6 79 104-185 27-106 (201)
79 1tjy_A Sugar transport protein 70.3 60 0.002 29.0 14.7 162 108-280 48-222 (316)
80 3is3_A 17BETA-hydroxysteroid d 70.2 37 0.0013 29.9 10.9 55 122-184 20-74 (270)
81 3qiv_A Short-chain dehydrogena 69.3 39 0.0013 29.1 10.7 31 122-154 11-41 (253)
82 3osu_A 3-oxoacyl-[acyl-carrier 69.2 48 0.0017 28.6 11.3 31 123-155 7-37 (246)
83 4da9_A Short-chain dehydrogena 69.1 61 0.0021 28.8 12.2 31 122-154 31-61 (280)
84 3ged_A Short-chain dehydrogena 68.9 58 0.002 29.0 11.8 29 124-154 6-34 (247)
85 3edm_A Short chain dehydrogena 68.7 51 0.0017 28.8 11.4 33 121-155 9-41 (259)
86 3tjr_A Short chain dehydrogena 68.6 66 0.0023 28.9 12.5 32 121-154 32-63 (301)
87 3hu5_A Isochorismatase family 68.4 6.9 0.00024 33.9 5.4 66 117-184 122-187 (204)
88 3oid_A Enoyl-[acyl-carrier-pro 68.1 50 0.0017 28.9 11.3 57 120-184 4-60 (258)
89 3hcw_A Maltose operon transcri 67.9 63 0.0022 28.3 18.9 156 110-280 58-228 (295)
90 3eef_A N-carbamoylsarcosine am 67.4 14 0.00049 31.1 7.1 64 117-185 106-170 (182)
91 3ksu_A 3-oxoacyl-acyl carrier 67.3 33 0.0011 30.2 9.9 58 122-185 13-70 (262)
92 3ucx_A Short chain dehydrogena 66.9 65 0.0022 28.1 12.2 32 121-154 12-43 (264)
93 3iup_A Putative NADPH:quinone 66.8 9 0.00031 36.2 6.3 62 110-183 161-222 (379)
94 3rg8_A Phosphoribosylaminoimid 66.6 18 0.00062 30.5 7.3 61 246-315 58-118 (159)
95 2uvd_A 3-oxoacyl-(acyl-carrier 66.3 62 0.0021 27.8 11.4 30 123-154 7-36 (246)
96 3o94_A Nicotinamidase; hydrola 66.3 9.9 0.00034 33.3 6.0 64 117-183 139-204 (211)
97 4a2c_A Galactitol-1-phosphate 66.3 16 0.00054 33.5 7.8 51 122-184 162-212 (346)
98 2fvy_A D-galactose-binding per 65.6 69 0.0024 27.9 13.7 33 246-280 203-236 (309)
99 4iiu_A 3-oxoacyl-[acyl-carrier 65.5 61 0.0021 28.3 11.3 55 122-184 28-82 (267)
100 3ijr_A Oxidoreductase, short c 65.5 65 0.0022 28.7 11.7 57 121-185 48-104 (291)
101 1kol_A Formaldehyde dehydrogen 65.4 17 0.00056 34.4 7.9 48 122-181 187-234 (398)
102 3u9l_A 3-oxoacyl-[acyl-carrier 65.1 81 0.0028 28.8 12.5 32 123-155 7-38 (324)
103 3awd_A GOX2181, putative polyo 64.9 65 0.0022 27.7 11.2 31 122-154 15-45 (260)
104 4e3z_A Putative oxidoreductase 64.8 48 0.0016 29.1 10.5 56 123-185 28-83 (272)
105 3gaf_A 7-alpha-hydroxysteroid 64.7 49 0.0017 28.9 10.4 31 122-154 14-44 (256)
106 1u7z_A Coenzyme A biosynthesis 63.7 9.6 0.00033 34.0 5.4 36 120-155 8-57 (226)
107 4grd_A N5-CAIR mutase, phospho 63.5 59 0.002 27.7 10.0 85 232-328 57-142 (173)
108 3goh_A Alcohol dehydrogenase, 63.5 7.2 0.00024 35.6 4.7 47 122-182 144-190 (315)
109 1piw_A Hypothetical zinc-type 63.3 12 0.00042 34.8 6.5 48 122-182 181-228 (360)
110 4ggo_A Trans-2-enoyl-COA reduc 62.9 53 0.0018 31.7 10.9 102 120-257 49-151 (401)
111 3sx2_A Putative 3-ketoacyl-(ac 62.9 79 0.0027 27.7 13.5 33 121-155 14-46 (278)
112 3v8b_A Putative dehydrogenase, 62.4 54 0.0018 29.2 10.4 33 120-154 28-60 (283)
113 1g0o_A Trihydroxynaphthalene r 62.0 77 0.0026 27.9 11.4 31 123-155 32-62 (283)
114 1nf9_A Phenazine biosynthesis 61.3 11 0.00039 32.4 5.4 62 117-181 138-200 (207)
115 4fgs_A Probable dehydrogenase 61.2 67 0.0023 29.0 10.8 33 120-154 29-61 (273)
116 3s2e_A Zinc-containing alcohol 61.2 9.4 0.00032 35.2 5.1 50 122-184 168-217 (340)
117 3r3s_A Oxidoreductase; structu 61.0 91 0.0031 27.8 11.9 32 121-154 50-81 (294)
118 3qk7_A Transcriptional regulat 60.8 86 0.0029 27.4 18.3 36 245-282 186-225 (294)
119 3gk3_A Acetoacetyl-COA reducta 60.1 76 0.0026 27.7 10.9 30 123-154 28-57 (269)
120 2jah_A Clavulanic acid dehydro 60.0 84 0.0029 27.1 12.6 31 122-154 9-39 (247)
121 3nrc_A Enoyl-[acyl-carrier-pro 59.9 73 0.0025 28.1 10.8 33 122-156 28-62 (280)
122 3gyb_A Transcriptional regulat 59.8 84 0.0029 27.0 14.0 187 113-334 53-252 (280)
123 2h0a_A TTHA0807, transcription 59.7 83 0.0028 26.9 13.7 35 245-281 179-217 (276)
124 3tg2_A Vibriobactin-specific i 59.7 11 0.00039 33.2 5.1 65 117-183 134-198 (223)
125 4ej6_A Putative zinc-binding d 59.5 21 0.0007 33.5 7.3 49 122-182 184-232 (370)
126 3ot4_A Putative isochorismatas 59.3 14 0.00048 32.9 5.7 64 117-183 155-219 (236)
127 3huu_A Transcription regulator 59.2 93 0.0032 27.3 18.6 34 245-280 201-238 (305)
128 3sju_A Keto reductase; short-c 59.1 95 0.0032 27.4 12.1 56 120-184 24-79 (279)
129 3sg0_A Extracellular ligand-bi 59.0 98 0.0033 27.8 11.8 149 112-281 80-248 (386)
130 3gqv_A Enoyl reductase; medium 58.8 20 0.00069 33.5 7.1 49 122-183 166-214 (371)
131 1yac_A Ycacgp, YCAC gene produ 58.6 11 0.00037 32.8 4.8 65 116-183 100-165 (208)
132 3tqh_A Quinone oxidoreductase; 58.5 18 0.00062 33.0 6.6 48 122-182 154-201 (321)
133 4eye_A Probable oxidoreductase 58.3 15 0.0005 34.0 6.0 50 122-183 161-210 (342)
134 1e3j_A NADP(H)-dependent ketos 58.2 20 0.00068 33.1 6.9 48 122-182 170-217 (352)
135 3ors_A N5-carboxyaminoimidazol 58.1 76 0.0026 26.8 9.7 64 232-304 48-111 (163)
136 3hb7_A Isochorismatase hydrola 58.1 10 0.00035 32.8 4.5 63 117-182 116-178 (204)
137 1h2b_A Alcohol dehydrogenase; 58.0 15 0.00051 34.2 6.0 48 122-182 188-236 (359)
138 3kke_A LACI family transcripti 57.8 98 0.0034 27.2 21.1 34 245-280 196-233 (303)
139 2fqx_A Membrane lipoprotein TM 57.5 1.1E+02 0.0037 27.6 13.8 154 111-282 53-225 (318)
140 3h7a_A Short chain dehydrogena 57.2 84 0.0029 27.3 10.6 73 122-207 9-81 (252)
141 3tfo_A Putative 3-oxoacyl-(acy 56.7 1E+02 0.0035 27.1 13.7 54 123-185 7-60 (264)
142 2dph_A Formaldehyde dismutase; 56.7 19 0.00064 34.1 6.5 47 122-181 187-234 (398)
143 4evq_A Putative ABC transporte 56.6 51 0.0017 29.8 9.3 140 120-280 82-239 (375)
144 1x9g_A Putative MAR1; structur 56.5 7.9 0.00027 33.6 3.5 60 120-181 106-167 (200)
145 3a28_C L-2.3-butanediol dehydr 56.4 98 0.0034 26.7 11.1 30 123-154 5-34 (258)
146 3nx4_A Putative oxidoreductase 56.2 24 0.00083 32.0 7.0 48 124-183 150-197 (324)
147 3qlj_A Short chain dehydrogena 56.1 70 0.0024 29.0 10.2 32 122-155 29-60 (322)
148 3ipc_A ABC transporter, substr 56.0 1.1E+02 0.0038 27.2 13.4 149 112-281 61-227 (356)
149 1pl8_A Human sorbitol dehydrog 56.0 23 0.00078 32.8 6.9 49 122-182 173-221 (356)
150 1uuf_A YAHK, zinc-type alcohol 55.9 20 0.00069 33.6 6.5 48 122-182 196-243 (369)
151 3tsc_A Putative oxidoreductase 55.6 1.1E+02 0.0036 26.9 13.7 32 121-154 12-43 (277)
152 3l77_A Short-chain alcohol deh 55.5 67 0.0023 27.2 9.5 30 123-154 5-34 (235)
153 2hcy_A Alcohol dehydrogenase 1 55.5 28 0.00097 32.0 7.4 49 122-182 171-219 (347)
154 3kjx_A Transcriptional regulat 55.0 1.2E+02 0.0041 27.2 17.0 156 110-280 114-283 (344)
155 1j2r_A Hypothetical isochorism 55.0 11 0.00036 32.3 4.0 62 117-181 128-190 (199)
156 3qwb_A Probable quinone oxidor 54.7 18 0.00062 33.1 5.9 51 122-184 150-200 (334)
157 3snr_A Extracellular ligand-bi 54.6 1.2E+02 0.0039 27.0 14.3 147 112-281 60-224 (362)
158 2b5w_A Glucose dehydrogenase; 54.5 38 0.0013 31.3 8.2 50 122-181 174-226 (357)
159 3cxt_A Dehydrogenase with diff 54.2 1.2E+02 0.0041 27.0 12.4 31 122-154 36-66 (291)
160 3bfj_A 1,3-propanediol oxidore 54.1 92 0.0031 29.3 10.9 101 172-283 27-144 (387)
161 3llv_A Exopolyphosphatase-rela 53.9 27 0.00092 27.4 6.1 30 123-154 8-37 (141)
162 3v2h_A D-beta-hydroxybutyrate 53.9 1.2E+02 0.004 26.8 11.3 31 122-154 27-57 (281)
163 2rhc_B Actinorhodin polyketide 53.8 1.2E+02 0.0039 26.7 12.2 31 122-154 24-54 (277)
164 3gdg_A Probable NADP-dependent 53.8 1.1E+02 0.0036 26.5 10.7 35 122-156 21-56 (267)
165 3g85_A Transcriptional regulat 53.6 1.1E+02 0.0037 26.4 13.4 34 245-280 187-224 (289)
166 1xa0_A Putative NADPH dependen 53.5 23 0.00079 32.2 6.4 48 123-182 152-199 (328)
167 2g1u_A Hypothetical protein TM 53.3 20 0.00067 28.9 5.3 32 121-154 19-50 (155)
168 3i1j_A Oxidoreductase, short c 53.3 1.1E+02 0.0036 26.1 10.8 31 122-154 16-46 (247)
169 1rjw_A ADH-HT, alcohol dehydro 53.2 21 0.0007 32.9 6.0 47 122-181 166-212 (339)
170 1zem_A Xylitol dehydrogenase; 53.1 1.1E+02 0.0039 26.4 12.2 31 122-154 9-39 (262)
171 3krt_A Crotonyl COA reductase; 52.9 15 0.00053 35.5 5.3 50 122-183 230-279 (456)
172 1fmc_A 7 alpha-hydroxysteroid 52.6 1.1E+02 0.0037 26.0 11.4 55 123-185 13-67 (255)
173 3k9c_A Transcriptional regulat 52.5 1.2E+02 0.004 26.4 20.2 36 245-282 184-223 (289)
174 2fq1_A Isochorismatase; ENTB, 52.5 18 0.00061 32.9 5.4 67 116-184 140-206 (287)
175 3o38_A Short chain dehydrogena 52.0 1.2E+02 0.004 26.3 10.9 32 122-154 24-55 (266)
176 3fpc_A NADP-dependent alcohol 52.0 21 0.00071 33.0 5.9 49 122-182 168-216 (352)
177 1iz0_A Quinone oxidoreductase; 51.9 22 0.00077 32.0 5.9 49 122-182 127-175 (302)
178 4b7c_A Probable oxidoreductase 51.8 18 0.00063 33.1 5.4 49 122-182 151-200 (336)
179 3okf_A 3-dehydroquinate syntha 51.7 73 0.0025 30.5 9.8 92 176-282 61-158 (390)
180 3fbg_A Putative arginate lyase 51.2 15 0.00051 34.0 4.7 50 122-183 152-201 (346)
181 4a0s_A Octenoyl-COA reductase/ 51.0 17 0.00059 34.9 5.3 49 122-182 222-270 (447)
182 3e8x_A Putative NAD-dependent 51.0 38 0.0013 28.9 7.0 52 120-184 21-73 (236)
183 3k31_A Enoyl-(acyl-carrier-pro 50.8 1.2E+02 0.0042 26.9 10.9 33 121-154 31-64 (296)
184 3uog_A Alcohol dehydrogenase; 50.8 19 0.00067 33.5 5.5 49 122-183 191-239 (363)
185 3h5o_A Transcriptional regulat 50.8 1.4E+02 0.0047 26.7 18.1 155 110-280 108-275 (339)
186 3o74_A Fructose transport syst 50.7 1.2E+02 0.004 25.8 20.0 84 230-334 169-255 (272)
187 4ibo_A Gluconate dehydrogenase 50.5 81 0.0028 27.8 9.4 29 122-152 28-56 (271)
188 2py6_A Methyltransferase FKBM; 50.5 4.5 0.00015 39.0 1.0 61 92-157 19-86 (409)
189 3ioy_A Short-chain dehydrogena 50.3 1.2E+02 0.0042 27.4 10.8 32 122-155 10-41 (319)
190 2cdc_A Glucose dehydrogenase g 50.0 25 0.00087 32.7 6.1 50 122-181 182-231 (366)
191 1xmp_A PURE, phosphoribosylami 49.9 81 0.0028 26.8 8.6 64 232-304 56-119 (170)
192 3gms_A Putative NADPH:quinone 49.8 24 0.00083 32.4 5.9 50 122-183 146-195 (340)
193 3tfo_A Putative 3-oxoacyl-(acy 49.5 83 0.0028 27.7 9.3 72 170-257 21-92 (264)
194 3grk_A Enoyl-(acyl-carrier-pro 49.5 79 0.0027 28.3 9.3 33 120-154 31-65 (293)
195 1tt7_A YHFP; alcohol dehydroge 49.5 24 0.00081 32.2 5.8 48 123-182 153-200 (330)
196 3rkr_A Short chain oxidoreduct 49.4 84 0.0029 27.3 9.3 31 123-154 31-61 (262)
197 3e03_A Short chain dehydrogena 49.4 50 0.0017 29.2 7.8 33 122-156 8-40 (274)
198 3jyn_A Quinone oxidoreductase; 49.3 18 0.0006 33.1 4.8 50 122-183 142-191 (325)
199 3zv4_A CIS-2,3-dihydrobiphenyl 49.3 1.4E+02 0.0047 26.3 13.6 53 121-185 6-58 (281)
200 3lop_A Substrate binding perip 49.0 1.5E+02 0.0051 26.6 13.7 147 113-280 65-229 (364)
201 3h75_A Periplasmic sugar-bindi 48.9 1.5E+02 0.0051 26.6 16.7 33 246-280 205-241 (350)
202 3jv7_A ADH-A; dehydrogenase, n 48.8 28 0.00096 32.0 6.2 50 122-184 173-223 (345)
203 1wma_A Carbonyl reductase [NAD 48.8 1.1E+02 0.0037 26.1 9.9 32 123-155 6-38 (276)
204 1nba_A N-carbamoylsarcosine am 48.7 26 0.0009 31.6 5.8 62 117-181 160-222 (264)
205 4dup_A Quinone oxidoreductase; 48.6 20 0.00069 33.2 5.2 50 122-183 169-218 (353)
206 3td9_A Branched chain amino ac 48.2 1.5E+02 0.0052 26.5 13.6 151 111-282 71-239 (366)
207 1xkq_A Short-chain reductase f 48.1 1.4E+02 0.0048 26.1 11.3 30 123-154 9-38 (280)
208 3ftp_A 3-oxoacyl-[acyl-carrier 47.9 1.1E+02 0.0039 26.8 10.0 30 123-154 31-60 (270)
209 1zsy_A Mitochondrial 2-enoyl t 47.7 33 0.0011 31.7 6.5 53 122-182 169-221 (357)
210 3trh_A Phosphoribosylaminoimid 47.7 65 0.0022 27.3 7.7 61 246-312 61-121 (169)
211 1rrm_A Lactaldehyde reductase; 47.6 55 0.0019 30.8 8.2 99 172-283 25-142 (386)
212 3uko_A Alcohol dehydrogenase c 47.6 30 0.001 32.3 6.3 49 122-182 195-243 (378)
213 4imr_A 3-oxoacyl-(acyl-carrier 47.2 1.1E+02 0.0038 26.9 9.9 57 120-185 33-89 (275)
214 3kuu_A Phosphoribosylaminoimid 47.0 76 0.0026 27.1 8.0 71 232-312 57-127 (174)
215 2hq1_A Glucose/ribitol dehydro 46.9 1.3E+02 0.0045 25.4 11.9 30 123-153 7-36 (247)
216 3txy_A Isochorismatase family 46.7 17 0.00059 31.2 4.0 62 117-181 122-184 (199)
217 1xhl_A Short-chain dehydrogena 46.6 1.6E+02 0.0054 26.2 11.6 31 123-154 28-58 (297)
218 3lyl_A 3-oxoacyl-(acyl-carrier 46.6 97 0.0033 26.4 9.1 31 123-155 8-38 (247)
219 1geg_A Acetoin reductase; SDR 46.4 1.4E+02 0.0048 25.6 12.4 30 123-154 5-34 (256)
220 1l7d_A Nicotinamide nucleotide 46.4 39 0.0013 31.9 6.9 47 122-181 173-219 (384)
221 3ai3_A NADPH-sorbose reductase 46.4 1.4E+02 0.0049 25.7 12.5 30 123-154 10-39 (263)
222 2cf5_A Atccad5, CAD, cinnamyl 46.2 37 0.0013 31.4 6.7 48 122-182 182-230 (357)
223 2qq5_A DHRS1, dehydrogenase/re 46.2 1.4E+02 0.0049 25.6 11.3 30 123-154 8-37 (260)
224 1yxm_A Pecra, peroxisomal tran 45.8 1.6E+02 0.0053 25.9 11.2 32 122-155 20-51 (303)
225 3kkj_A Amine oxidase, flavin-c 45.7 22 0.00074 29.3 4.5 28 122-152 4-31 (336)
226 1o4v_A Phosphoribosylaminoimid 45.7 42 0.0014 28.9 6.2 59 232-298 58-116 (183)
227 3imf_A Short chain dehydrogena 45.7 79 0.0027 27.5 8.4 30 123-154 9-38 (257)
228 1jx6_A LUXP protein; protein-l 45.6 1.6E+02 0.0056 26.1 14.6 156 110-280 94-267 (342)
229 1gu7_A Enoyl-[acyl-carrier-pro 45.3 32 0.0011 31.8 6.0 53 122-182 169-221 (364)
230 3tb6_A Arabinose metabolism tr 45.3 1.5E+02 0.005 25.5 18.7 32 247-280 202-237 (298)
231 3tox_A Short chain dehydrogena 45.2 92 0.0032 27.6 9.0 29 122-152 10-38 (280)
232 3sc4_A Short chain dehydrogena 45.1 61 0.0021 28.8 7.7 33 122-156 11-43 (285)
233 1e3i_A Alcohol dehydrogenase, 45.1 36 0.0012 31.7 6.3 49 122-182 197-245 (376)
234 2h6e_A ADH-4, D-arabinose 1-de 45.1 27 0.00093 32.1 5.5 47 122-181 172-220 (344)
235 4egf_A L-xylulose reductase; s 45.0 1.2E+02 0.0042 26.4 9.7 31 122-154 22-52 (266)
236 1jvb_A NAD(H)-dependent alcoho 44.8 28 0.00095 32.1 5.5 49 122-182 172-221 (347)
237 3ip1_A Alcohol dehydrogenase, 44.5 35 0.0012 32.2 6.3 50 122-183 215-264 (404)
238 1u11_A PURE (N5-carboxyaminoim 44.4 43 0.0015 28.8 6.1 64 232-304 66-129 (182)
239 3dbi_A Sugar-binding transcrip 44.3 1.7E+02 0.0059 26.0 21.4 155 111-280 110-278 (338)
240 1edo_A Beta-keto acyl carrier 44.3 1.4E+02 0.0049 25.1 10.3 29 124-153 4-32 (244)
241 1iy8_A Levodione reductase; ox 44.3 1.6E+02 0.0054 25.5 12.5 31 122-154 15-45 (267)
242 3o26_A Salutaridine reductase; 44.2 1.6E+02 0.0055 25.6 14.6 34 120-155 12-45 (311)
243 1p0f_A NADP-dependent alcohol 43.9 40 0.0014 31.3 6.5 49 122-182 193-241 (373)
244 3gxh_A Putative phosphatase (D 43.8 78 0.0027 25.6 7.6 43 206-256 65-107 (157)
245 3zen_D Fatty acid synthase; tr 43.8 4.2E+02 0.014 32.4 16.2 34 122-155 2137-2170(3089)
246 3e3m_A Transcriptional regulat 43.7 1.8E+02 0.0062 26.1 18.6 157 110-280 116-286 (355)
247 1pqw_A Polyketide synthase; ro 43.5 32 0.0011 28.6 5.2 47 122-180 40-86 (198)
248 2c0c_A Zinc binding alcohol de 43.5 26 0.00088 32.7 5.0 50 122-183 165-214 (362)
249 3pk0_A Short-chain dehydrogena 43.4 1.2E+02 0.0042 26.3 9.4 31 122-154 12-42 (262)
250 1cdo_A Alcohol dehydrogenase; 42.9 44 0.0015 31.1 6.6 49 122-182 194-242 (374)
251 1yqd_A Sinapyl alcohol dehydro 42.7 53 0.0018 30.5 7.1 48 122-182 189-237 (366)
252 3mcw_A Putative hydrolase; iso 42.7 32 0.0011 29.3 5.2 40 117-157 109-149 (198)
253 4dry_A 3-oxoacyl-[acyl-carrier 42.6 1.1E+02 0.0038 27.0 9.1 32 120-153 33-64 (281)
254 2vn8_A Reticulon-4-interacting 42.3 42 0.0014 31.2 6.4 48 122-182 185-232 (375)
255 4ffl_A PYLC; amino acid, biosy 42.1 27 0.00092 32.3 4.9 31 122-154 2-32 (363)
256 3ic5_A Putative saccharopine d 41.9 47 0.0016 24.5 5.5 48 123-183 7-55 (118)
257 3gaz_A Alcohol dehydrogenase s 41.8 33 0.0011 31.6 5.4 46 122-180 152-197 (343)
258 2p91_A Enoyl-[acyl-carrier-pro 41.6 1.8E+02 0.0061 25.4 10.9 32 122-154 23-55 (285)
259 2b4q_A Rhamnolipids biosynthes 41.4 1.8E+02 0.0062 25.5 10.8 30 122-153 31-60 (276)
260 3egc_A Putative ribose operon 41.4 1.7E+02 0.0059 25.2 19.3 35 245-281 185-223 (291)
261 2jhf_A Alcohol dehydrogenase E 41.4 44 0.0015 31.0 6.3 49 122-182 193-241 (374)
262 3l49_A ABC sugar (ribose) tran 41.3 1.7E+02 0.0058 25.1 18.8 164 109-281 50-225 (291)
263 1e7w_A Pteridine reductase; di 41.2 1.9E+02 0.0064 25.5 10.7 30 122-153 11-40 (291)
264 1t57_A Conserved protein MTH16 41.1 1.1E+02 0.0038 26.7 8.2 78 104-185 35-113 (206)
265 2b34_A F35G2.2, MAR1 ribonucle 41.1 26 0.00088 30.1 4.3 59 121-182 101-160 (199)
266 2j8z_A Quinone oxidoreductase; 41.0 32 0.0011 31.9 5.2 49 122-182 164-212 (354)
267 3oow_A Phosphoribosylaminoimid 40.7 59 0.002 27.5 6.3 50 246-299 60-109 (166)
268 1fmc_A 7 alpha-hydroxysteroid 40.7 1.7E+02 0.0057 24.8 9.7 72 170-257 28-99 (255)
269 1yb5_A Quinone oxidoreductase; 40.4 33 0.0011 31.8 5.2 49 122-182 172-220 (351)
270 2bm8_A Cephalosporin hydroxyla 40.3 65 0.0022 27.9 6.9 38 248-285 84-121 (236)
271 2x9g_A PTR1, pteridine reducta 40.0 1.9E+02 0.0065 25.3 10.8 34 120-155 23-56 (288)
272 1o2d_A Alcohol dehydrogenase, 39.7 87 0.003 29.4 8.2 77 197-283 58-150 (371)
273 4gqb_A Protein arginine N-meth 39.7 14 0.00047 38.1 2.6 36 249-284 361-396 (637)
274 3nyw_A Putative oxidoreductase 39.7 1.8E+02 0.0062 25.0 11.5 32 121-154 8-39 (250)
275 2j3h_A NADP-dependent oxidored 39.5 41 0.0014 30.7 5.7 49 122-182 157-206 (345)
276 1v3u_A Leukotriene B4 12- hydr 39.4 41 0.0014 30.6 5.7 49 122-182 147-195 (333)
277 3ek2_A Enoyl-(acyl-carrier-pro 39.1 96 0.0033 26.7 7.9 33 122-155 16-49 (271)
278 3e61_A Putative transcriptiona 39.1 1.8E+02 0.0062 24.7 16.4 33 246-280 177-213 (277)
279 3kvo_A Hydroxysteroid dehydrog 39.1 84 0.0029 29.1 7.9 61 122-184 47-107 (346)
280 1mxh_A Pteridine reductase 2; 39.1 1.9E+02 0.0065 25.0 11.9 31 122-154 13-43 (276)
281 3miz_A Putative transcriptiona 38.9 1.9E+02 0.0066 25.0 14.3 34 245-280 196-233 (301)
282 3f4w_A Putative hexulose 6 pho 38.9 78 0.0027 26.6 7.1 68 110-185 67-135 (211)
283 3tpc_A Short chain alcohol deh 38.8 67 0.0023 27.8 6.8 33 122-156 9-41 (257)
284 3lyl_A 3-oxoacyl-(acyl-carrier 38.8 91 0.0031 26.6 7.7 40 111-152 20-59 (247)
285 2d8a_A PH0655, probable L-thre 38.8 29 0.00099 32.0 4.5 48 122-182 169-217 (348)
286 3uf0_A Short-chain dehydrogena 38.8 2E+02 0.0068 25.2 13.6 55 121-185 32-86 (273)
287 1yzv_A Hypothetical protein; s 38.7 16 0.00055 31.6 2.6 63 117-181 106-171 (204)
288 1vj0_A Alcohol dehydrogenase, 38.4 44 0.0015 31.2 5.8 48 122-182 197-245 (380)
289 3ezl_A Acetoacetyl-COA reducta 38.2 1.2E+02 0.0042 25.9 8.4 56 123-185 15-70 (256)
290 3oj0_A Glutr, glutamyl-tRNA re 38.1 48 0.0016 26.1 5.3 27 120-148 20-46 (144)
291 1x13_A NAD(P) transhydrogenase 38.0 52 0.0018 31.4 6.3 47 122-181 173-219 (401)
292 3icc_A Putative 3-oxoacyl-(acy 37.9 97 0.0033 26.4 7.7 56 123-185 9-64 (255)
293 2zb4_A Prostaglandin reductase 37.8 49 0.0017 30.4 6.0 49 122-182 162-212 (357)
294 2zat_A Dehydrogenase/reductase 37.8 1.9E+02 0.0066 24.7 11.0 53 123-184 17-69 (260)
295 1w6u_A 2,4-dienoyl-COA reducta 37.6 2.1E+02 0.0071 25.0 12.0 31 122-154 28-58 (302)
296 3lp6_A Phosphoribosylaminoimid 37.4 53 0.0018 28.1 5.5 64 246-315 62-125 (174)
297 2eih_A Alcohol dehydrogenase; 37.4 31 0.0011 31.6 4.6 48 122-181 168-215 (343)
298 4eez_A Alcohol dehydrogenase 1 37.4 69 0.0023 29.1 6.9 50 122-184 165-215 (348)
299 3f1l_A Uncharacterized oxidore 37.4 2E+02 0.0067 24.7 11.5 32 121-154 13-44 (252)
300 3i6i_A Putative leucoanthocyan 37.4 2.3E+02 0.0078 25.4 11.9 33 122-156 12-44 (346)
301 2fzw_A Alcohol dehydrogenase c 37.3 41 0.0014 31.2 5.4 49 122-182 192-240 (373)
302 3afn_B Carbonyl reductase; alp 36.9 1.2E+02 0.004 25.8 8.1 56 123-185 9-64 (258)
303 1f8f_A Benzyl alcohol dehydrog 36.8 50 0.0017 30.6 5.9 50 122-183 192-241 (371)
304 1qor_A Quinone oxidoreductase; 36.7 37 0.0013 30.8 4.9 49 122-182 142-190 (327)
305 1vlj_A NADH-dependent butanol 36.5 1.6E+02 0.0054 27.9 9.6 99 172-283 37-153 (407)
306 1yb1_A 17-beta-hydroxysteroid 36.5 1.8E+02 0.0063 25.2 9.4 31 122-154 33-63 (272)
307 3imf_A Short chain dehydrogena 36.2 42 0.0014 29.3 5.0 10 273-282 179-188 (257)
308 1wly_A CAAR, 2-haloacrylate re 35.7 33 0.0011 31.3 4.4 49 122-182 147-195 (333)
309 3svt_A Short-chain type dehydr 35.6 1.6E+02 0.0056 25.6 9.0 32 121-154 12-43 (281)
310 1ae1_A Tropinone reductase-I; 35.3 2E+02 0.0069 25.0 9.5 31 122-154 23-53 (273)
311 3ctm_A Carbonyl reductase; alc 35.3 2.2E+02 0.0075 24.6 11.6 55 123-185 36-90 (279)
312 4ekn_B Aspartate carbamoyltran 35.2 70 0.0024 29.6 6.5 57 123-185 153-211 (306)
313 1ae1_A Tropinone reductase-I; 35.0 2.2E+02 0.0077 24.6 12.4 11 272-282 192-202 (273)
314 4eyg_A Twin-arginine transloca 34.8 2.4E+02 0.0083 25.0 14.5 147 113-280 64-230 (368)
315 3kvo_A Hydroxysteroid dehydrog 34.8 2.7E+02 0.0092 25.5 16.9 12 271-282 222-233 (346)
316 3irv_A Cysteine hydrolase; str 34.7 65 0.0022 28.2 6.0 41 117-157 135-175 (233)
317 3tzq_B Short-chain type dehydr 34.6 2.3E+02 0.0078 24.6 13.9 33 121-155 12-44 (271)
318 3h7a_A Short chain dehydrogena 34.6 1.4E+02 0.0049 25.7 8.3 71 170-257 24-94 (252)
319 3grp_A 3-oxoacyl-(acyl carrier 34.5 2.3E+02 0.0079 24.6 10.6 52 122-185 29-80 (266)
320 3rih_A Short chain dehydrogena 34.5 2.5E+02 0.0084 25.0 11.1 54 123-184 43-97 (293)
321 3rot_A ABC sugar transporter, 34.4 2.3E+02 0.0078 24.5 19.0 202 108-335 49-269 (297)
322 3rku_A Oxidoreductase YMR226C; 34.4 1.3E+02 0.0043 26.8 8.1 32 120-153 33-67 (287)
323 4dvj_A Putative zinc-dependent 34.4 44 0.0015 31.0 5.1 49 122-182 173-222 (363)
324 3g1w_A Sugar ABC transporter; 34.2 2.3E+02 0.0078 24.5 18.6 202 108-334 49-264 (305)
325 3ox4_A Alcohol dehydrogenase 2 34.1 62 0.0021 30.6 6.1 77 197-283 48-140 (383)
326 3efb_A Probable SOR-operon reg 34.0 98 0.0033 27.6 7.2 68 210-284 28-96 (266)
327 2c07_A 3-oxoacyl-(acyl-carrier 33.9 2.4E+02 0.0081 24.6 11.0 54 123-185 47-100 (285)
328 3brq_A HTH-type transcriptiona 33.8 2.2E+02 0.0076 24.3 20.4 36 245-282 199-238 (296)
329 3svt_A Short-chain type dehydr 33.8 93 0.0032 27.3 7.0 12 272-283 185-196 (281)
330 1vp8_A Hypothetical protein AF 33.7 1.2E+02 0.0041 26.4 7.2 56 211-280 18-73 (201)
331 1vdm_A Purine phosphoribosyltr 33.3 94 0.0032 24.7 6.4 29 303-331 81-110 (153)
332 4hp8_A 2-deoxy-D-gluconate 3-d 33.3 86 0.0029 27.9 6.6 55 120-185 9-63 (247)
333 2zat_A Dehydrogenase/reductase 33.1 2.3E+02 0.0079 24.2 9.8 72 170-257 31-102 (260)
334 3rih_A Short chain dehydrogena 33.0 1.8E+02 0.0061 25.9 8.9 72 170-257 58-130 (293)
335 3m6i_A L-arabinitol 4-dehydrog 32.9 63 0.0022 29.7 5.9 48 122-181 181-228 (363)
336 2wm3_A NMRA-like family domain 32.9 1.2E+02 0.0042 26.5 7.7 52 123-184 7-59 (299)
337 3m1a_A Putative dehydrogenase; 32.5 2.4E+02 0.0084 24.3 12.3 51 123-184 7-57 (281)
338 2h3h_A Sugar ABC transporter, 32.4 2.5E+02 0.0086 24.4 14.1 156 110-281 47-217 (313)
339 2q5c_A NTRC family transcripti 32.4 60 0.0021 27.7 5.2 39 109-155 131-169 (196)
340 2qhx_A Pteridine reductase 1; 32.3 2.8E+02 0.0096 25.0 11.6 30 122-153 48-77 (328)
341 1yb1_A 17-beta-hydroxysteroid 32.3 2.5E+02 0.0085 24.3 12.7 11 272-282 204-214 (272)
342 3d4o_A Dipicolinate synthase s 32.3 81 0.0028 28.3 6.4 49 104-154 133-186 (293)
343 3l6u_A ABC-type sugar transpor 32.3 2.4E+02 0.0082 24.1 19.3 35 245-281 194-229 (293)
344 2rjo_A Twin-arginine transloca 32.1 2.6E+02 0.0091 24.6 12.3 44 230-280 186-231 (332)
345 2cul_A Glucose-inhibited divis 31.5 47 0.0016 28.5 4.5 31 122-155 5-35 (232)
346 3lqy_A Putative isochorismatas 31.3 71 0.0024 26.8 5.5 41 117-157 109-149 (190)
347 3d3j_A Enhancer of mRNA-decapp 31.3 1.5E+02 0.0051 27.3 8.1 53 123-180 135-190 (306)
348 3pk0_A Short-chain dehydrogena 31.2 2.6E+02 0.0087 24.1 10.5 12 272-283 182-193 (262)
349 2ae2_A Protein (tropinone redu 31.2 2.3E+02 0.0079 24.3 9.1 32 122-155 11-42 (260)
350 3rss_A Putative uncharacterize 31.1 88 0.003 31.0 6.8 54 122-181 54-110 (502)
351 3oqp_A Putative isochorismatas 31.0 74 0.0025 27.5 5.7 40 117-157 105-145 (211)
352 2fep_A Catabolite control prot 30.9 2.6E+02 0.0088 24.1 21.0 36 245-282 194-233 (289)
353 4ibo_A Gluconate dehydrogenase 30.8 1E+02 0.0034 27.2 6.7 12 272-283 196-207 (271)
354 3orq_A N5-carboxyaminoimidazol 30.8 62 0.0021 30.2 5.5 32 122-155 13-44 (377)
355 4eqs_A Coenzyme A disulfide re 30.7 2.3E+02 0.0078 26.8 9.6 60 121-182 147-207 (437)
356 2gru_A 2-deoxy-scyllo-inosose 30.6 2.5E+02 0.0087 26.1 9.8 91 177-281 34-128 (368)
357 3n74_A 3-ketoacyl-(acyl-carrie 30.3 81 0.0028 27.2 5.9 32 122-155 11-42 (261)
358 2aef_A Calcium-gated potassium 30.3 2.5E+02 0.0085 23.7 9.2 94 122-278 10-103 (234)
359 3o26_A Salutaridine reductase; 30.2 2.4E+02 0.0081 24.5 9.1 72 170-257 29-102 (311)
360 4egf_A L-xylulose reductase; s 30.1 73 0.0025 27.9 5.6 12 272-283 192-203 (266)
361 3rkr_A Short chain oxidoreduct 29.9 2.7E+02 0.0091 23.9 12.8 12 272-283 200-211 (262)
362 2ywl_A Thioredoxin reductase r 29.9 73 0.0025 25.7 5.2 31 124-156 4-34 (180)
363 2rir_A Dipicolinate synthase, 29.7 94 0.0032 28.0 6.4 31 122-154 158-188 (300)
364 1xah_A Sadhqs, 3-dehydroquinat 29.7 73 0.0025 29.7 5.7 61 212-283 62-126 (354)
365 2okg_A Central glycolytic gene 29.6 2.3E+02 0.0078 24.9 8.9 34 249-282 57-90 (255)
366 3sc4_A Short chain dehydrogena 29.6 2.9E+02 0.0098 24.2 14.8 11 272-282 187-197 (285)
367 1ja9_A 4HNR, 1,3,6,8-tetrahydr 29.5 93 0.0032 26.8 6.2 56 123-185 23-78 (274)
368 3ntd_A FAD-dependent pyridine 29.5 2.2E+02 0.0076 27.6 9.6 61 120-182 150-211 (565)
369 1x1t_A D(-)-3-hydroxybutyrate 29.5 2.7E+02 0.0091 23.8 10.4 31 123-154 6-36 (260)
370 3ruf_A WBGU; rossmann fold, UD 29.4 2.2E+02 0.0076 25.3 9.0 49 106-156 11-59 (351)
371 4h17_A Hydrolase, isochorismat 29.2 87 0.003 26.6 5.7 40 117-157 119-159 (197)
372 3afn_B Carbonyl reductase; alp 29.1 2.1E+02 0.0072 24.1 8.4 72 170-256 24-95 (258)
373 1vl8_A Gluconate 5-dehydrogena 29.1 2.8E+02 0.0097 24.0 9.8 30 123-154 24-53 (267)
374 3oig_A Enoyl-[acyl-carrier-pro 29.0 1.2E+02 0.0042 26.1 6.9 33 122-155 9-42 (266)
375 3ce6_A Adenosylhomocysteinase; 29.0 1.3E+02 0.0046 29.6 7.7 46 122-180 275-320 (494)
376 4fe7_A Xylose operon regulator 29.0 1.3E+02 0.0045 28.0 7.5 156 113-282 69-241 (412)
377 3i4f_A 3-oxoacyl-[acyl-carrier 28.9 1.6E+02 0.0054 25.3 7.6 33 122-155 8-40 (264)
378 1gee_A Glucose 1-dehydrogenase 28.9 2.7E+02 0.0091 23.6 9.3 70 170-255 24-94 (261)
379 3p2y_A Alanine dehydrogenase/p 28.8 82 0.0028 30.1 5.9 49 122-183 185-233 (381)
380 3q2o_A Phosphoribosylaminoimid 28.8 67 0.0023 29.9 5.4 32 122-155 15-46 (389)
381 2ioy_A Periplasmic sugar-bindi 28.7 1.1E+02 0.0037 26.5 6.5 156 111-281 48-217 (283)
382 3k7y_A Aspartate aminotransfer 28.5 2.5E+02 0.0086 26.3 9.4 49 124-185 101-151 (405)
383 2r6j_A Eugenol synthase 1; phe 28.4 1.4E+02 0.0047 26.4 7.2 32 123-156 14-45 (318)
384 2hqb_A Transcriptional activat 28.0 74 0.0025 28.3 5.3 32 246-281 181-212 (296)
385 2ae2_A Protein (tropinone redu 28.0 2.8E+02 0.0097 23.7 13.7 11 273-283 181-191 (260)
386 3gvc_A Oxidoreductase, probabl 28.0 3.1E+02 0.01 24.0 10.0 34 120-155 29-62 (277)
387 3t37_A Probable dehydrogenase; 27.8 37 0.0013 32.9 3.4 36 245-284 16-52 (526)
388 3keo_A Redox-sensing transcrip 27.8 24 0.00082 31.0 1.8 64 92-157 49-120 (212)
389 1jzt_A Hypothetical 27.5 kDa p 27.8 1.3E+02 0.0043 26.8 6.7 53 123-180 61-116 (246)
390 1sny_A Sniffer CG10964-PA; alp 27.6 2.8E+02 0.0097 23.5 11.9 33 123-156 23-58 (267)
391 2hmt_A YUAA protein; RCK, KTN, 27.4 64 0.0022 24.6 4.2 30 123-154 8-37 (144)
392 1pvv_A Otcase, ornithine carba 27.3 1.8E+02 0.006 27.0 7.8 34 123-157 157-190 (315)
393 3ado_A Lambda-crystallin; L-gu 27.2 65 0.0022 29.9 4.8 30 122-153 7-36 (319)
394 3d3k_A Enhancer of mRNA-decapp 27.1 1.4E+02 0.0049 26.6 7.0 53 123-180 88-143 (259)
395 4dio_A NAD(P) transhydrogenase 26.9 1.2E+02 0.0041 29.2 6.8 49 122-183 191-239 (405)
396 3csu_A Protein (aspartate carb 26.9 1E+02 0.0035 28.6 6.1 56 123-184 156-213 (310)
397 2oln_A NIKD protein; flavoprot 26.8 58 0.002 30.0 4.5 29 124-154 7-35 (397)
398 4e1o_A HDC, histidine decarbox 26.8 1.8E+02 0.0061 27.8 8.2 56 122-185 147-217 (481)
399 3h2s_A Putative NADH-flavin re 26.8 97 0.0033 25.7 5.6 30 124-155 4-33 (224)
400 3lf2_A Short chain oxidoreduct 26.7 3.1E+02 0.01 23.6 12.4 31 122-154 10-40 (265)
401 3oz2_A Digeranylgeranylglycero 26.7 60 0.002 29.3 4.5 28 122-152 6-33 (397)
402 3ve9_A Orotidine-5'-phosphate 26.7 1.7E+02 0.006 25.3 7.3 11 175-185 171-181 (215)
403 4e12_A Diketoreductase; oxidor 26.5 73 0.0025 28.4 4.9 30 122-153 5-34 (283)
404 3tox_A Short chain dehydrogena 26.4 63 0.0021 28.8 4.5 12 272-283 180-191 (280)
405 4dyv_A Short-chain dehydrogena 26.4 3.2E+02 0.011 23.8 9.4 30 122-152 29-58 (272)
406 3d8u_A PURR transcriptional re 26.2 2.9E+02 0.01 23.2 18.0 156 109-280 48-217 (275)
407 3hs3_A Ribose operon repressor 26.2 1.8E+02 0.0063 24.9 7.5 44 229-280 167-214 (277)
408 4eso_A Putative oxidoreductase 26.1 74 0.0025 27.7 4.8 34 120-155 8-41 (255)
409 3o1i_D Periplasmic protein TOR 25.9 3.1E+02 0.011 23.4 18.7 31 246-279 194-226 (304)
410 3dme_A Conserved exported prot 25.9 68 0.0023 28.7 4.7 30 124-155 7-36 (369)
411 1c1d_A L-phenylalanine dehydro 25.8 1.5E+02 0.005 28.0 7.1 45 107-154 155-205 (355)
412 3kl2_A Putative isochorismatas 25.8 1.1E+02 0.0036 26.6 5.8 40 117-157 147-187 (226)
413 4a5l_A Thioredoxin reductase; 25.7 57 0.0019 28.7 4.0 27 124-152 7-33 (314)
414 3s8m_A Enoyl-ACP reductase; ro 25.4 1.5E+02 0.0051 28.7 7.2 63 122-185 62-130 (422)
415 2h7i_A Enoyl-[acyl-carrier-pro 25.3 1.3E+02 0.0044 26.2 6.3 32 123-155 10-42 (269)
416 3rwb_A TPLDH, pyridoxal 4-dehy 25.2 3.2E+02 0.011 23.3 12.0 52 122-185 8-59 (247)
417 1h5q_A NADP-dependent mannitol 25.2 2.9E+02 0.0098 23.4 8.6 31 123-155 17-47 (265)
418 4e6p_A Probable sorbitol dehyd 25.2 2.8E+02 0.0095 23.8 8.5 31 122-154 10-40 (259)
419 1sby_A Alcohol dehydrogenase; 25.2 2.8E+02 0.0095 23.5 8.5 31 122-154 7-38 (254)
420 4hb9_A Similarities with proba 25.1 72 0.0025 29.1 4.8 27 124-152 4-30 (412)
421 4gcm_A TRXR, thioredoxin reduc 25.1 68 0.0023 28.4 4.5 26 125-152 10-35 (312)
422 1ej0_A FTSJ; methyltransferase 24.9 1.6E+02 0.0055 22.7 6.4 33 248-283 25-57 (180)
423 2rgy_A Transcriptional regulat 24.9 3.3E+02 0.011 23.3 19.6 155 112-283 59-228 (290)
424 1xq1_A Putative tropinone redu 24.8 3.2E+02 0.011 23.2 9.8 31 123-154 16-46 (266)
425 2a67_A Isochorismatase family 24.8 88 0.003 25.6 4.8 39 117-156 97-136 (167)
426 1duv_G Octase-1, ornithine tra 24.7 1.8E+02 0.006 27.3 7.3 57 123-185 157-217 (333)
427 2c07_A 3-oxoacyl-(acyl-carrier 24.7 2.8E+02 0.0095 24.2 8.5 71 171-257 62-132 (285)
428 3k40_A Aromatic-L-amino-acid d 24.6 1.6E+02 0.0054 28.3 7.3 55 123-185 142-211 (475)
429 4fc7_A Peroxisomal 2,4-dienoyl 24.6 3.5E+02 0.012 23.5 12.0 33 120-154 27-59 (277)
430 2gnp_A Transcriptional regulat 24.5 2.5E+02 0.0085 24.9 8.2 28 251-278 60-88 (266)
431 3jy6_A Transcriptional regulat 24.5 3.2E+02 0.011 23.1 21.1 35 245-281 180-218 (276)
432 3ew7_A LMO0794 protein; Q8Y8U8 24.5 1.4E+02 0.0048 24.4 6.2 30 124-155 4-33 (221)
433 3clk_A Transcription regulator 24.5 3.3E+02 0.011 23.3 18.1 36 245-282 184-223 (290)
434 3ftp_A 3-oxoacyl-[acyl-carrier 24.5 75 0.0026 28.0 4.6 50 100-152 33-82 (270)
435 2h4a_A YRAM (HI1655); perplasm 24.4 4E+02 0.014 24.1 13.2 149 110-283 46-211 (325)
436 1ml4_A Aspartate transcarbamoy 24.4 80 0.0027 29.2 4.8 56 123-184 157-213 (308)
437 1lnq_A MTHK channels, potassiu 24.4 3.9E+02 0.013 24.0 9.9 115 101-278 95-209 (336)
438 3q9t_A Choline dehydrogenase a 24.3 39 0.0013 34.0 2.9 36 245-284 5-41 (577)
439 3i09_A Periplasmic branched-ch 24.3 3.8E+02 0.013 23.9 14.2 145 113-278 63-228 (375)
440 3kzv_A Uncharacterized oxidore 24.2 3.3E+02 0.011 23.2 12.3 29 123-153 5-35 (254)
441 2i2c_A Probable inorganic poly 24.1 1.4E+02 0.0048 26.6 6.4 41 246-288 35-75 (272)
442 2pju_A Propionate catabolism o 23.9 90 0.0031 27.4 4.9 38 108-153 142-179 (225)
443 3tl3_A Short-chain type dehydr 23.9 3.4E+02 0.012 23.1 9.1 50 121-185 10-59 (257)
444 1yvv_A Amine oxidase, flavin-c 23.9 74 0.0025 28.3 4.5 28 124-153 5-32 (336)
445 2rgh_A Alpha-glycerophosphate 23.9 1.1E+02 0.0038 30.3 6.2 31 119-152 31-61 (571)
446 4e4t_A Phosphoribosylaminoimid 23.8 86 0.0029 29.9 5.1 31 122-154 36-66 (419)
447 4e6p_A Probable sorbitol dehyd 23.7 3.3E+02 0.011 23.2 8.7 68 170-256 25-92 (259)
448 1dxh_A Ornithine carbamoyltran 23.6 1.8E+02 0.0061 27.2 7.1 35 123-157 157-191 (335)
449 2vdc_G Glutamate synthase [NAD 23.6 1.9E+02 0.0064 27.8 7.6 56 122-182 265-321 (456)
450 3e03_A Short chain dehydrogena 23.6 3.6E+02 0.012 23.3 16.1 11 272-282 185-195 (274)
451 3ua3_A Protein arginine N-meth 23.5 25 0.00087 36.7 1.3 35 249-283 413-456 (745)
452 1hdc_A 3-alpha, 20 beta-hydrox 23.4 3.5E+02 0.012 23.1 11.8 31 123-155 8-38 (254)
453 4fk1_A Putative thioredoxin re 23.4 77 0.0026 28.1 4.5 28 122-152 8-35 (304)
454 4dqx_A Probable oxidoreductase 23.3 3.7E+02 0.013 23.4 12.6 32 122-155 29-60 (277)
455 1ryi_A Glycine oxidase; flavop 23.3 80 0.0027 28.7 4.7 29 124-154 20-48 (382)
456 1xu9_A Corticosteroid 11-beta- 23.3 1.3E+02 0.0044 26.4 6.0 32 122-155 30-61 (286)
457 3alj_A 2-methyl-3-hydroxypyrid 23.3 82 0.0028 28.9 4.8 30 123-154 13-42 (379)
458 1ja9_A 4HNR, 1,3,6,8-tetrahydr 23.2 3.4E+02 0.012 23.0 8.7 73 170-257 38-110 (274)
459 3ezl_A Acetoacetyl-COA reducta 23.1 2.6E+02 0.0087 23.8 7.8 73 170-257 30-102 (256)
460 3rp8_A Flavoprotein monooxygen 23.0 83 0.0028 29.1 4.8 29 124-154 26-54 (407)
461 2i6u_A Otcase, ornithine carba 23.0 2E+02 0.0069 26.4 7.3 35 123-157 150-184 (307)
462 3ohp_A Hypoxanthine phosphorib 22.9 1.6E+02 0.0055 24.5 6.2 96 229-331 20-118 (177)
463 2h31_A Multifunctional protein 22.9 1.9E+02 0.0064 28.1 7.3 81 232-328 310-391 (425)
464 3k5i_A Phosphoribosyl-aminoimi 22.9 77 0.0026 29.9 4.6 30 122-153 25-54 (403)
465 1vlv_A Otcase, ornithine carba 22.8 1.8E+02 0.0062 27.1 7.0 35 123-157 169-203 (325)
466 3brs_A Periplasmic binding pro 22.8 1.2E+02 0.0042 26.0 5.7 160 109-283 54-227 (289)
467 1o98_A 2,3-bisphosphoglycerate 22.7 1.3E+02 0.0046 29.8 6.4 53 105-157 93-154 (511)
468 1xq1_A Putative tropinone redu 22.7 3.5E+02 0.012 22.9 11.7 12 272-283 185-196 (266)
469 2cfc_A 2-(R)-hydroxypropyl-COM 22.6 2.9E+02 0.0099 23.2 8.0 70 170-255 19-89 (250)
470 3uf0_A Short-chain dehydrogena 22.6 3.6E+02 0.012 23.4 8.8 70 170-257 48-117 (273)
471 4at0_A 3-ketosteroid-delta4-5a 22.6 74 0.0025 30.9 4.5 28 122-152 43-70 (510)
472 2gas_A Isoflavone reductase; N 22.6 1.4E+02 0.0048 26.0 6.1 33 122-156 4-36 (307)
473 1sg6_A Pentafunctional AROM po 22.6 2.8E+02 0.0097 26.0 8.5 77 196-281 51-139 (393)
474 3ka7_A Oxidoreductase; structu 22.6 93 0.0032 28.8 5.0 27 124-152 3-29 (425)
475 4dbe_A Orotidine 5'-phosphate 22.5 1.9E+02 0.0066 25.1 6.8 17 136-152 125-141 (222)
476 1vl8_A Gluconate 5-dehydrogena 22.4 3.8E+02 0.013 23.1 12.9 12 272-283 193-204 (267)
477 3rwb_A TPLDH, pyridoxal 4-dehy 22.4 3.6E+02 0.012 22.9 9.6 69 170-257 23-91 (247)
478 2x3n_A Probable FAD-dependent 22.3 85 0.0029 28.9 4.7 29 124-154 9-37 (399)
479 1xg5_A ARPG836; short chain de 22.3 3.8E+02 0.013 23.1 9.2 70 170-255 49-120 (279)
480 3ppi_A 3-hydroxyacyl-COA dehyd 22.2 1.3E+02 0.0046 26.2 5.8 31 122-154 32-62 (281)
481 3cgv_A Geranylgeranyl reductas 22.2 81 0.0028 28.7 4.5 30 124-155 7-36 (397)
482 3n0w_A ABC branched chain amin 22.1 4.2E+02 0.015 23.6 16.4 142 113-275 65-225 (379)
483 3ru6_A Orotidine 5'-phosphate 22.1 2.7E+02 0.0094 25.6 8.0 86 112-204 163-250 (303)
484 3n74_A 3-ketoacyl-(acyl-carrie 22.0 3.6E+02 0.012 22.8 9.2 69 170-257 26-94 (261)
485 4f06_A Extracellular ligand-bi 22.0 4.3E+02 0.015 23.7 15.0 142 118-279 70-230 (371)
486 3h5t_A Transcriptional regulat 21.7 4.3E+02 0.015 23.6 17.2 44 230-281 258-305 (366)
487 1pg5_A Aspartate carbamoyltran 21.7 1E+02 0.0036 28.3 5.0 53 123-184 151-205 (299)
488 3fbs_A Oxidoreductase; structu 21.6 97 0.0033 26.7 4.7 29 124-154 5-33 (297)
489 4fcc_A Glutamate dehydrogenase 21.5 2.6E+02 0.0088 27.3 8.0 47 107-155 216-267 (450)
490 1c0p_A D-amino acid oxidase; a 21.4 89 0.003 28.3 4.6 29 124-154 9-37 (363)
491 3nix_A Flavoprotein/dehydrogen 21.4 82 0.0028 29.1 4.4 30 124-155 8-37 (421)
492 1ebd_A E3BD, dihydrolipoamide 21.3 2.2E+02 0.0075 26.8 7.5 35 121-157 170-204 (455)
493 1y56_B Sarcosine oxidase; dehy 21.3 87 0.003 28.5 4.5 31 121-154 6-36 (382)
494 3jzd_A Iron-containing alcohol 21.3 1.8E+02 0.0061 27.2 6.7 73 171-260 29-102 (358)
495 3oig_A Enoyl-[acyl-carrier-pro 21.2 3.8E+02 0.013 22.8 9.2 71 170-257 26-98 (266)
496 3lxd_A FAD-dependent pyridine 21.2 4.1E+02 0.014 24.4 9.4 60 121-182 152-213 (415)
497 3qvp_A Glucose oxidase; oxidor 21.1 51 0.0017 33.2 3.0 35 245-283 18-53 (583)
498 4dgk_A Phytoene dehydrogenase; 21.1 83 0.0029 30.0 4.5 28 123-152 3-30 (501)
499 2gf3_A MSOX, monomeric sarcosi 21.1 94 0.0032 28.2 4.7 29 124-154 6-34 (389)
500 3grp_A 3-oxoacyl-(acyl carrier 20.9 4.1E+02 0.014 23.0 9.2 69 170-257 44-112 (266)
No 1
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=2e-46 Score=360.42 Aligned_cols=256 Identities=38% Similarity=0.597 Sum_probs=214.7
Q ss_pred CCCCchhhcCCCCCcccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCC
Q 019410 24 APPSWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQL 101 (341)
Q Consensus 24 ~~p~~~~~~~~~~~~~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ 101 (341)
+||+|++.|..++ ++.+.+++|||++ +++|++ |++||+| |||++++.+
T Consensus 1 ~~~~~~~~l~~~~--~i~~~~~~TPL~~--~~~l~~~~g~~i~~K--------------------------~E~~~p~~~ 50 (325)
T 1j0a_A 1 MHPKIFALLAKFP--RVELIPWETPIQY--LPNISREIGADVYIK--------------------------RDDLTGLGI 50 (325)
T ss_dssp CCHHHHHHHTTCC--CCCCCCSCCCEEE--CHHHHHHHTSEEEEE--------------------------EGGGSCSTT
T ss_pred CCchhhhhhccCC--CcccccCCCCceE--hhhhhhhhCCEEEEE--------------------------ecccCCCCC
Confidence 6999999999999 7899999999999 677765 8899999 889876557
Q ss_pred CchHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC-CCcCCCCCcchhHHHHHhCCCEE
Q 019410 102 SGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK-VLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 102 ggnK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~-~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
||||+|++.+++.+|+++|.++||++|+|+||||+|+|++|+++|++|++|||..+ + ..|+.++++|||+|
T Consensus 51 gs~K~R~~~~~i~~a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~--------~~k~~~~~~~GA~v 122 (325)
T 1j0a_A 51 GGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEEL--------KGNYLLDKIMGIET 122 (325)
T ss_dssp CSTHHHHHHHHHHHHHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCCCS--------CHHHHHHHHTTCEE
T ss_pred CchHHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCCCC--------CchHHHHHHCCCEE
Confidence 99999999999999999999999999889999999999999999999999999877 4 46899999999999
Q ss_pred EEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHH
Q 019410 181 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 260 (341)
Q Consensus 181 ~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~ 260 (341)
++++.. ++.. ..+...+.+++++++++..|++|+|+.|+.+.+||.+++.||++|+. ..+|+||+|+|||||+
T Consensus 123 ~~~~~~-~~~~-~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vv~~vGtGGt~ 195 (325)
T 1j0a_A 123 RVYDAK-DSFE-LMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSE-----VKFDSIVVAAGSGGTL 195 (325)
T ss_dssp EEESCC-STTT-HHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHTHHHHHHHHHHHHCC-----CCCSEEEEEESSSHHH
T ss_pred EEeCcc-hhhh-hhHHHHHHHHHHHHcCCceEEEcCCCCCHHHHHHHHHHHHHHHHhhC-----CCCCEEEEeCCchHhH
Confidence 999874 3210 00112344566666554568999999999999999999999999984 4699999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhc----cc-CC-C-------CCCceEEeccchHHHHHHHHHH
Q 019410 261 AGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDG----LN-AG-V-------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 261 aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~----~~-~~-~-------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+|++.++|+.++++|||||++.++..+....+..+.++ ++ +. + ..++ +.|+|.+++.+++.++.
T Consensus 196 ~Gi~~~lk~~~~~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~ 272 (325)
T 1j0a_A 196 AGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGE-YGKITGEVAQIIRKVGT 272 (325)
T ss_dssp HHHHHHHHHTTCCCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCCCCSCCEEEECSTTS-TTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHhcCCCCCCCcEEecCcccC-CCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999987766555444333 22 11 1 3567 99999999999888864
No 2
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=1.8e-44 Score=349.47 Aligned_cols=264 Identities=33% Similarity=0.441 Sum_probs=213.9
Q ss_pred CCCchhhcCCCCCcccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCC
Q 019410 25 PPSWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLS 102 (341)
Q Consensus 25 ~p~~~~~~~~~~~~~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~g 102 (341)
.|+....+...+ |+++.+++|||++ +++|++ |++||+| |||++++.+|
T Consensus 13 ~~~~~~~~~a~~--ri~~~~~~TPL~~--~~~l~~~~g~~v~~K--------------------------~E~l~p~~~g 62 (342)
T 4d9b_A 13 ASMPLHHLTRFP--RLEFIGAPTPLEY--LPRLSDYLGREIYIK--------------------------RDDVTPIAMG 62 (342)
T ss_dssp --CTTGGGGGSC--CCCSSCSCCCEEE--CHHHHHHHTSCEEEE--------------------------EGGGCSSTTC
T ss_pred ccCCcchhccCC--cccccCCCCceeE--hhhhHHhhCCEEEEE--------------------------eCCCCCCCCc
Confidence 344555677777 8999999999999 777766 8899999 8998876689
Q ss_pred chHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 103 GNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 103 gnK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
|||+|++.+++.+|+++|.++||++||++||||+|+|++|+++|++|+||||..++..+..+...+|+.++++|||+|++
T Consensus 63 s~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~ 142 (342)
T 4d9b_A 63 GNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 142 (342)
T ss_dssp CTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEE
T ss_pred chHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEE
Confidence 99999999999999999999999998889999999999999999999999998876321000013589999999999999
Q ss_pred ECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHH
Q 019410 183 ISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAG 262 (341)
Q Consensus 183 v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aG 262 (341)
++... +..+.++++++++.++++..|++|++++|+.+.+||.+++.||++|+.+ . ..+|+||+|+|||||++|
T Consensus 143 ~~~~~----~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~~~G~~t~~~EI~~q~~~--~-~~~d~vv~~vGtGGt~aG 215 (342)
T 4d9b_A 143 CDALT----DPDAQLQTLATRIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEE--V-VGLSSVVVASGSAGTHAG 215 (342)
T ss_dssp CSCCS----SHHHHHHHHHHHHHHTTCCEEECCGGGCSHHHHHHHHHHHHHHHHHHTT--T-CCCCEEEEEESSSHHHHH
T ss_pred ECchh----hHHHHHHHHHHHHHhcCCceEEeCCCCCChHHHHHHHHHHHHHHHHHhc--c-CCCCEEEEeCCCCHHHHH
Confidence 98642 1223445566777776656789999999999999999999999999962 1 369999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEeeCCCCccchHhHH----HHhhcccC---------CCCCCceEEeccchHHHHHHHHHH
Q 019410 263 LSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQ----GLLDGLNA---------GVDSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 263 l~~~~k~~~~~~rVigVe~~g~~~~~~~~i~----~l~~~~~~---------~~~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
++.++|..++++|||||++.++..+....+. .++++++. .-..++++.|+|.+++.+++.++.
T Consensus 216 i~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 291 (342)
T 4d9b_A 216 LAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLAS 291 (342)
T ss_dssp HHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHHHHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHHHHHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHH
Confidence 9999999999999999999998766544333 33444443 113678999999999999888765
No 3
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3.2e-42 Score=333.16 Aligned_cols=260 Identities=26% Similarity=0.378 Sum_probs=206.6
Q ss_pred cCCCCCcccccCcCCCcccccCCCCCCC---C-ceEEEeeCCCCCCccccCccchhhHhhhhhccccccc-CCCCCchHh
Q 019410 32 LAPIPSHVFSLGHFPTPIHKWNLPNLPH---N-TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLS-GMQLSGNKV 106 (341)
Q Consensus 32 ~~~~~~~~~~~~~~~TPl~~~~l~~L~~---g-~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~-~~~~ggnK~ 106 (341)
|..+| |+.+.+++|||++ +++|++ | ++||+| |||++ ++.+||||+
T Consensus 3 l~~~~--~i~~~~~~TPL~~--~~~l~~~~~g~~~i~~K--------------------------~E~~n~p~~~Gs~K~ 52 (341)
T 1f2d_A 3 VAKFA--KYPLTFGPSPISN--LNRLSQHLGSKVNVYAK--------------------------REDCNSGLAFGGNKL 52 (341)
T ss_dssp TTSSC--CCCCSSSSCCEEE--CHHHHHHTTTCSEEEEE--------------------------EGGGSCSSTTCCHHH
T ss_pred cccCC--CcccCCCCCccee--HHhHHHhhCCCceEEEE--------------------------eCCCCCCCCCCchHH
Confidence 55666 7889999999999 666654 5 899999 99996 767899999
Q ss_pred HHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCC-Cc--CCCCCcchhHHHHHhCCCEEEEE
Q 019410 107 RKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-LV--DQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 107 Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~-~~--~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
|++.+++.+|+++|.++||++|+|+||||+|+|++|+++|++|++|||..++ .. .+.+...+|+.++++|||+|+.+
T Consensus 53 R~a~~~l~~a~~~g~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~ 132 (341)
T 1f2d_A 53 RKLEYIVPDIVEGDYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVI 132 (341)
T ss_dssp HHHTTTHHHHHHSCCSEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEe
Confidence 9999999999999999999999999999999999999999999999998875 10 01011246899999999999999
Q ss_pred CCccccccCcHHHHHHHHHHHHHhCCCcEEeCCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHH
Q 019410 184 SKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAG 262 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g-~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aG 262 (341)
+...+... . +.+.+.++++.++++..|++|.+ ++||.+..||.+++.||++|+.+ .+..+|+||+|+|||||++|
T Consensus 133 ~~~~~~~~-~-~~~~~~a~~l~~~~~~~~~i~~~~~~np~~~~G~~t~~~Ei~~q~~~--~~~~~d~vv~~vGtGgt~~G 208 (341)
T 1f2d_A 133 EDGFDIGM-R-KSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVINQEVE--LGIKFDKIVVCCVTGSTTAG 208 (341)
T ss_dssp CCCCCSSC-C-HHHHHHHHHHHHTTCCEEEECGGGTTSTTTTTHHHHHHHHHHHHHHH--HTCCCSEEEEEESSSHHHHH
T ss_pred CCccchhH-H-HHHHHHHHHHHhcCCcEEEeCCCcCCCCccHHHHHHHHHHHHHHHHh--cCCCCCEEEEecCchHhHHH
Confidence 86433110 0 12234566677665446889988 99999999999999999999963 12469999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEeeCCCCccchHhHHHH----hhccc-----CCC-----CCCceEEeccchHHHHHHHHHH
Q 019410 263 LSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGL----LDGLN-----AGV-----DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 263 l~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l----~~~~~-----~~~-----~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
++.+++..++++|||||++.++..+...++..+ .++++ ..+ ..++++.|+|.+++..++.++.
T Consensus 209 i~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 285 (341)
T 1f2d_A 209 ILAGMAQYGRQDDVIAIDASFTSEKTKEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAE 285 (341)
T ss_dssp HHHHHGGGTCGGGEEEEECSSCHHHHHHHHHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHH
Confidence 999999999999999999999876554433222 22332 111 3567899999999999888765
No 4
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-41 Score=336.75 Aligned_cols=263 Identities=18% Similarity=0.138 Sum_probs=190.9
Q ss_pred CccccccccccCCCC---------CCCchhhcCCCCC---------cccccCcCCCcccccCCCCCCC--CceEEEeeCC
Q 019410 10 SDAFGFKFLTKTSYA---------PPSWASHLAPIPS---------HVFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNF 69 (341)
Q Consensus 10 ~~~~~~~~~~~~~~~---------~p~~~~~~~~~~~---------~~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~ 69 (341)
|+++.|++.++-+|+ +|+|+..+. |. .++.+.+++|||++ +++|++ |++||+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~ig~TPLv~--l~~Ls~~~g~~I~lK--- 143 (430)
T 4aec_A 71 SSASDFSLAMKRQSRSFADGSERDPSVVCEAVK--RETGPDGLNIADNVSQLIGKTPMVY--LNSIAKGCVANIAAK--- 143 (430)
T ss_dssp -------------------------------CC--CCCTTSSCSCBSSGGGGSSCCCEEE--CCGGGTTCSSEEEEE---
T ss_pred ccccchhhcccCccceeecCCCCCChhHhhhcC--ccccccccchhhhhhccCCCCCeEE--ChhhhhhcCCeEEEE---
Confidence 344778899999999 999999887 33 47889999999999 777766 7899999
Q ss_pred CCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHHcCC-----CeEEEeCCCcchHHHHHHHHHHH
Q 019410 70 SGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQSNHCRAAAVAAKY 144 (341)
Q Consensus 70 ~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~~g~-----~~vVt~G~s~GNhg~AlA~aa~~ 144 (341)
+||+++ +||||+|++.+++.+|+++|. ++||++ ++||||+|+|++|++
T Consensus 144 -----------------------~E~lnp--tGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~a--SsGNhG~AlA~aAa~ 196 (430)
T 4aec_A 144 -----------------------LEIMEP--CCSVKDRIGYSMVTDAEQKGFISPGKSVLVEP--TSGNTGIGLAFIAAS 196 (430)
T ss_dssp -----------------------EGGGST--TSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHHHHHHHHH
T ss_pred -----------------------ECCCCC--CCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEE--CCCHHHHHHHHHHHH
Confidence 777764 689999999999999999986 678875 459999999999999
Q ss_pred cCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-cccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhH
Q 019410 145 LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG 223 (341)
Q Consensus 145 ~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~ 223 (341)
+|++|+||||+.++ ..|+..++.|||+|+.++.+ .|++ .. +.++++.++.++.|+++ ++.||.+
T Consensus 197 ~Gl~~~IvmP~~~s--------~~k~~~~r~~GAeVv~v~~~~~~~~-----a~-~~a~el~~~~~~~~~i~-~~~np~~ 261 (430)
T 4aec_A 197 RGYRLILTMPASMS--------MERRVLLKAFGAELVLTDPAKGMTG-----AV-QKAEEILKNTPDAYMLQ-QFDNPAN 261 (430)
T ss_dssp HTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HH-HHHHHHHHHSTTEEECC-TTTCTHH
T ss_pred hCCEEEEEEcCCCC--------HHHHHHHHHCCCEEEEECCCCChHH-----HH-HHHHHHHHhcCCcEEec-CCCCccH
Confidence 99999999998875 45899999999999999853 3432 22 33455555433456554 4578887
Q ss_pred -HHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccc-----hHhHHHHhh
Q 019410 224 -TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYF-----YDYTQGLLD 297 (341)
Q Consensus 224 -~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~-----~~~i~~l~~ 297 (341)
..||.+++.||++|+. ..+|+||+|+|||||++|++.++|..+++++||||++.+++... .+.+++|..
T Consensus 262 ~~aG~~T~a~EI~eQl~-----~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~ 336 (430)
T 4aec_A 262 PKIHYETTGPEIWDDTK-----GKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGA 336 (430)
T ss_dssp HHHHHHTHHHHHHHHTT-----SCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCC
T ss_pred HHHHHHHHHHHHHHHcC-----CCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccC
Confidence 5899999999999985 36999999999999999999999998999999999999875432 122333333
Q ss_pred cccCC----CCCCceEEeccchHHHHHHHHHHH
Q 019410 298 GLNAG----VDSRDIVNIQNVSVYMTFKNILMN 326 (341)
Q Consensus 298 ~~~~~----~~~~~iv~v~d~~~~~~~~~~~~~ 326 (341)
++.+. -..|+++.|+|.+.+..++.++..
T Consensus 337 ~~~p~~l~~~~vd~~v~Vsd~ea~~a~r~La~~ 369 (430)
T 4aec_A 337 GFIPKNLDQKIMDEVIAISSEEAIETAKQLALK 369 (430)
T ss_dssp SSCCTTCCTTTCSEEEEECHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHhCCeEEEECHHHHHHHHHHHHHH
Confidence 32221 136789999999999988888763
No 5
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=4.1e-41 Score=324.52 Aligned_cols=259 Identities=27% Similarity=0.432 Sum_probs=201.6
Q ss_pred cCCCCCcccccCcCCCcccccCCCCCCC---C-ceEEEeeCCCCCCccccCccchhhHhhhhhccccccc-CCCCCchHh
Q 019410 32 LAPIPSHVFSLGHFPTPIHKWNLPNLPH---N-TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLS-GMQLSGNKV 106 (341)
Q Consensus 32 ~~~~~~~~~~~~~~~TPl~~~~l~~L~~---g-~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~-~~~~ggnK~ 106 (341)
|..+| |+.+.+++|||++ +++|++ | ++||+| |||++ ++++||||+
T Consensus 3 ~~~~~--~i~~~~~~TPL~~--~~~l~~~~~g~~~i~~K--------------------------~E~~n~p~~~gs~K~ 52 (338)
T 1tzj_A 3 LQRFP--RYPLTFGPTPIQP--LARLSKHLGGKVHLYAK--------------------------REDCNSGLAFGGNKT 52 (338)
T ss_dssp GGGSC--CCCCSSSSCCEEE--CHHHHHHTTSSSEEEEE--------------------------EGGGSCSSTTCCHHH
T ss_pred cccCC--ccccCCCCCccEE--HHHHHHhhCCCceEEEE--------------------------eCCCCCCCCCCchHH
Confidence 45556 7889999999999 666644 5 799999 99995 666899999
Q ss_pred HHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc
Q 019410 107 RKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE 186 (341)
Q Consensus 107 Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~ 186 (341)
|++.+++.+|+++|.++||++|+|+||||+|+|++|+++|++|++|||..++...+.+...+|+++++.|||+|+.++..
T Consensus 53 R~a~~~l~~a~~~g~~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~ 132 (338)
T 1tzj_A 53 RKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG 132 (338)
T ss_dssp HHHHTTHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc
Confidence 99999999999999999999888999999999999999999999999988753211112246899999999999999864
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCcEEeCCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHH
Q 019410 187 EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSL 265 (341)
Q Consensus 187 ~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g-~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~ 265 (341)
+++.. .+.+.++++++.++.+..|++|.+ ++||.+..||.+++.||++|+.+ .+..+|+||+|+|||||++|++.
T Consensus 133 -~~~~~-~~~~~~~a~~l~~~~~~~~~~p~~~~~n~~~~~g~~t~~~Ei~~q~~~--~~~~~d~vv~~vG~GGt~~Gi~~ 208 (338)
T 1tzj_A 133 -FDIGF-RRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAE--LGFKFDYVVVCSVTGSTQAGMVV 208 (338)
T ss_dssp --------CHHHHHHHHHHHTTCCEEECCGGGTSSTTTTTHHHHHHHHHHHHHHH--HTSCCSEEEEEESSSHHHHHHHH
T ss_pred -chhhH-HHHHHHHHHHHHhcCCceEEeCCCcCCCcccHHHHHHHHHHHHHHHHh--cCCCCCEEEEecCCcHHHHHHHH
Confidence 32210 011234566666655456889988 89999999999999999999962 12369999999999999999999
Q ss_pred HHhcC-CCCCeEEEEeeCCCCccchHhHH----HHhhcccC------------CCCCCceEEeccchHHHHHHHHHH
Q 019410 266 GSWLG-TLKAKVHAFSVCDDPDYFYDYTQ----GLLDGLNA------------GVDSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 266 ~~k~~-~~~~rVigVe~~g~~~~~~~~i~----~l~~~~~~------------~~~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+++.. .++ |||||++.++..+....+. .+.++++. .-..++++.|+|.+++.+++.++.
T Consensus 209 ~~k~~g~~~-~vigve~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 284 (338)
T 1tzj_A 209 GFAADGRAD-RVIGVDASAKPAQTREQITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCAR 284 (338)
T ss_dssp HHHTTTCGG-GEEEEECSSCHHHHHHHHHHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHH
T ss_pred HHHhhCCCC-eEEEEEccCchHHHHHHHHHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHHH
Confidence 99988 788 9999999998765544332 22332221 112457889999999998888764
No 6
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.7e-38 Score=301.48 Aligned_cols=234 Identities=20% Similarity=0.191 Sum_probs=170.6
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |++||+| |||+++ +||||+|++.+++.+|
T Consensus 7 ~i~~~~~~TPL~~--l~~l~~~~g~~i~~K--------------------------~E~~~p--tgSfK~R~a~~~l~~a 56 (308)
T 2egu_A 7 SITELIGDTPAVK--LNRIVDEDSADVYLK--------------------------LEFMNP--GSSVKDRIALAMIEAA 56 (308)
T ss_dssp CGGGGSSCCCEEE--CCSSSCTTSCEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEE--CCcccccCCCEEEEE--------------------------ecccCC--CCChHHHHHHHHHHHH
Confidence 6778889999999 788876 7899999 888753 7999999999999999
Q ss_pred HHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-ccccc
Q 019410 117 VAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKI 191 (341)
Q Consensus 117 ~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~ 191 (341)
.++|. ++||+ +|+||||+|+|++|+.+|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 57 ~~~g~~~~g~~vv~--assGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~- 125 (308)
T 2egu_A 57 EKAGKLKPGDTIVE--PTSGNTGIGLAMVAAAKGYKAVLVMPDTMS--------LERRNLLRAYGAELVLTPGAQGMRG- 125 (308)
T ss_dssp HHTTCCCTTCEEEE--ECCHHHHHHHHHHHHHHTCEEEEEEESCSC--------HHHHHHHHHTTCEEEEECGGGHHHH-
T ss_pred HHcCCCCCCCEEEE--eCCCHHHHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-
Confidence 98887 68887 578999999999999999999999998874 45899999999999999863 2432
Q ss_pred CcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcC
Q 019410 192 GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG 270 (341)
Q Consensus 192 ~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~ 270 (341)
. .+.++++.++.+ ++++.++.|+.++ .||.+++.||++|+. .++|+||+|+|||||++|++.++|..
T Consensus 126 ----~-~~~a~~l~~~~~--~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~ 193 (308)
T 2egu_A 126 ----A-IAKAEELVREHG--YFMPQQFKNEANPEIHRLTTGKEIVEQMG-----DQLDAFVAGVGTGGTITGAGKVLREA 193 (308)
T ss_dssp ----H-HHHHHHHHHHHC--CBCC--------------CHHHHHHHHHT-----TCCCEEEEEGGGTHHHHHHHHHHHHH
T ss_pred ----H-HHHHHHHHHHCc--CCcCCcCCChhHHHHHHHHHHHHHHHHcC-----CCCCEEEEeeCCchhHHHHHHHHHHh
Confidence 2 233455554432 2456677888875 689999999999996 25999999999999999999999998
Q ss_pred CCCCeEEEEeeCCCCccch-----HhHHHHhhcccCC----CCCCceEEeccchHHHHHHHHHH
Q 019410 271 TLKAKVHAFSVCDDPDYFY-----DYTQGLLDGLNAG----VDSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 271 ~~~~rVigVe~~g~~~~~~-----~~i~~l~~~~~~~----~~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
++++|||||++.+++.... +.++++..++.+. ...|+++.|+|.+++.+++.++.
T Consensus 194 ~~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~ 257 (308)
T 2egu_A 194 YPNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAR 257 (308)
T ss_dssp CTTCEEEEEEECC-----------------------CCCCCCSCSEEEEECHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHHHHHH
Confidence 8999999999998753221 2233343332221 13679999999999999888765
No 7
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=8.7e-38 Score=301.79 Aligned_cols=235 Identities=16% Similarity=0.108 Sum_probs=184.5
Q ss_pred ccccCcCCCcccccCCCCCCC-CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH-NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAV 117 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~-g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~ 117 (341)
++.+.+++|||++ +++|.. |++||+| |||+++ +||||+|++.+++.+|+
T Consensus 14 ~i~~~ig~TPL~~--l~~l~~~g~~i~~K--------------------------~E~~~p--tGSfK~R~a~~~i~~a~ 63 (334)
T 3tbh_A 14 SIDQLIGQTPALY--LNKLNNTKAKVVLK--------------------------MECENP--MASVKDRLGFAIYDKAE 63 (334)
T ss_dssp SGGGGSSCCCEEE--CCTTCCSSSEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEE--CCcccCCCCEEEEE--------------------------eCCCCC--ccCcHHHHHHHHHHHHH
Confidence 7888999999999 777722 7899999 777764 68899999999999999
Q ss_pred HcCC----CeE-EEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-ccccc
Q 019410 118 AQGA----DCI-ITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKI 191 (341)
Q Consensus 118 ~~g~----~~v-Vt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~ 191 (341)
++|. ++| |++ |+||||+|+|++|+.+|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 64 ~~g~l~~g~~vvv~a--SsGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~- 132 (334)
T 3tbh_A 64 KEGKLIPGKSIVVES--SSGNTGVSLAHLGAIRGYKVIITMPESMS--------LERRCLLRIFGAEVILTPAALGMKG- 132 (334)
T ss_dssp HTTSCCTTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-
T ss_pred HcCCCCCCCeEEEEe--CCCHHHHHHHHHHHHhCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCchH-
Confidence 9987 774 775 45999999999999999999999998875 45899999999999999863 2332
Q ss_pred CcHHHHHHHHHHHHHhCCCcEEeCCCCCchhH-HHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcC
Q 019410 192 GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG 270 (341)
Q Consensus 192 ~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~-~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~ 270 (341)
..+ .++++.++.++.++++ ++.||.+ ..||.+++.||++|+. ..+|+||+|+|||||++|++.++|..
T Consensus 133 ----~~~-~a~~~~~~~~~~~~i~-~~~np~n~~~g~~t~~~Ei~~q~~-----~~~d~vv~pvG~GG~~aGi~~~~k~~ 201 (334)
T 3tbh_A 133 ----AVA-MAKKIVAANPNAVLAD-QFATKYNALIHEETTGPEIWEQTN-----HNVDCFIAGVGTGGTLTGVARALKKM 201 (334)
T ss_dssp ----HHH-HHHHHHHHCTTEEECC-TTTCHHHHHHHHHTHHHHHHHHTT-----SCCSEEEEECSSSHHHHHHHHHHHHT
T ss_pred ----HHH-HHHHHHHhCCCEEECC-ccCChhHHHHHHHHHHHHHHHHhC-----CCCCEEEeccCCcHhHHHHHHHHHHh
Confidence 222 3445554433455553 4567875 4588899999999985 36999999999999999999999999
Q ss_pred CCCCeEEEEeeCCCCccc-----hHhHHHHhhcccCCC----CCCceEEeccchHHHHHHHHHH
Q 019410 271 TLKAKVHAFSVCDDPDYF-----YDYTQGLLDGLNAGV----DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 271 ~~~~rVigVe~~g~~~~~-----~~~i~~l~~~~~~~~----~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
.|++|||||++.+++... .+.++++..++.+.. ..++++.|+|.+++.+++.++.
T Consensus 202 ~p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 265 (334)
T 3tbh_A 202 GSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTR 265 (334)
T ss_dssp TCCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 999999999999875432 122333333322211 3578999999999998887765
No 8
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=7.1e-38 Score=299.20 Aligned_cols=235 Identities=18% Similarity=0.163 Sum_probs=187.4
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |++||+| |||+++ +||||+|++.+++.+|
T Consensus 9 ~i~~~~~~TPL~~--~~~l~~~~g~~i~~K--------------------------~E~~~p--tgSfK~R~a~~~l~~a 58 (313)
T 2q3b_A 9 DITQLIGRTPLVR--LRRVTDGAVADIVAK--------------------------LEFFNP--ANSVKDRIGVAMLQAA 58 (313)
T ss_dssp SGGGGSCCCCEEE--CSSSCTTCCSEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHH
T ss_pred hHHHhcCCCceEE--CcccccccCcEEEEE--------------------------ehhcCC--CCcHHHHHHHHHHHHH
Confidence 6778889999999 777766 7899999 888763 7999999999999999
Q ss_pred HHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-ccccc
Q 019410 117 VAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKI 191 (341)
Q Consensus 117 ~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~ 191 (341)
.++|. ++||+ +|+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 59 ~~~g~~~~g~~vv~--assGN~g~alA~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~Ga~v~~~~~~~~~~~- 127 (313)
T 2q3b_A 59 EQAGLIKPDTIILE--PTSGNTGIALAMVCAARGYRCVLTMPETMS--------LERRMLLRAYGAELILTPGADGMSG- 127 (313)
T ss_dssp HHTTCCCTTCEEEE--ECSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-
T ss_pred HHcCCCCCCCEEEE--eCCCHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEeCCCCCHHH-
Confidence 98887 67887 578999999999999999999999998875 45899999999999999863 2432
Q ss_pred CcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHH-HHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcC
Q 019410 192 GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWG-YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG 270 (341)
Q Consensus 192 ~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G-~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~ 270 (341)
. .+.++++.++.+ ..+++.++.||.++.| |.+++.||++|+. .++|+||+|+|||||++|++.++|..
T Consensus 128 ----~-~~~a~~l~~~~~-~~~~~~~~~n~~~~~~~~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~ 196 (313)
T 2q3b_A 128 ----A-IAKAEELAKTDQ-RYFVPQQFENPANPAIHRVTTAEEVWRDTD-----GKVDIVVAGVGTGGTITGVAQVIKER 196 (313)
T ss_dssp ----H-HHHHHHHHHHCT-TEECCCTTTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHH
T ss_pred ----H-HHHHHHHHHhCC-CEEeCCCCCChhhHHHHHHHHHHHHHHHcC-----CCCCEEEEccCcchhHHHHHHHHHHh
Confidence 2 234555655542 3355677789998855 8999999999985 36999999999999999999999998
Q ss_pred CCCCeEEEEeeCCCCccc-----hHhHHHHhhcccCC-C---CCCceEEeccchHHHHHHHHHH
Q 019410 271 TLKAKVHAFSVCDDPDYF-----YDYTQGLLDGLNAG-V---DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 271 ~~~~rVigVe~~g~~~~~-----~~~i~~l~~~~~~~-~---~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
++++|||+|++.+++... .+.++++..++.+. + ..|+++.|+|.+++.+++.++.
T Consensus 197 ~~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~ 260 (313)
T 2q3b_A 197 KPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAR 260 (313)
T ss_dssp CTTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChhhhHhhccEEEEECHHHHHHHHHHHHH
Confidence 999999999999875431 11222232222221 1 3578999999999999888765
No 9
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=6.3e-38 Score=301.64 Aligned_cols=232 Identities=16% Similarity=0.122 Sum_probs=187.7
Q ss_pred ccccCcCCCcccccCCCCCCC---------CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH---------NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKL 109 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~---------g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl 109 (341)
++...+++|||++ +++|++ |++||+| +||+++ +||||+|++
T Consensus 8 ~i~~~ig~TPL~~--~~~l~~~~~~~~~~~g~~v~~K--------------------------~E~~~p--tGSfK~R~a 57 (325)
T 3dwg_A 8 SLLQALGNTPLVG--LQRLSPRWDDGRDGPHVRLWAK--------------------------LEDRNP--TGSIKDRPA 57 (325)
T ss_dssp STGGGCSCCCEEE--CTTTSSBSSCBTTBCCEEEEEE--------------------------ETTSST--TSBTTHHHH
T ss_pred CHHHhcCCCCcEE--ccccchhhcccccCCCcEEEEE--------------------------ECCCCC--CCChHHHHH
Confidence 4566789999999 677653 5799999 677654 688999999
Q ss_pred HHHHHHHHHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 110 EFLMADAVAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 110 ~~ll~~A~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
.+++.+|+++|. ++||++ |+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.
T Consensus 58 ~~~l~~a~~~g~l~~~~~vv~a--SsGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~ 127 (325)
T 3dwg_A 58 VRMIEQAEADGLLRPGATILEP--TSGNTGISLAMAARLKGYRLICVMPENTS--------VERRQLLELYGAQIIFSAA 127 (325)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEESSSC--------HHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHcCCCCCCCEEEEe--CCcHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECC
Confidence 999999999987 889885 56999999999999999999999998875 4589999999999999986
Q ss_pred c-cccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHH
Q 019410 186 E-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGL 263 (341)
Q Consensus 186 ~-~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl 263 (341)
. .|++ . .+.++++.++.++.+++ .++.||.+. .||.+++.||++|+. .+|+||+|+|||||++|+
T Consensus 128 ~~~~~~-----~-~~~a~~l~~~~~~~~~~-~~~~np~~~~~g~~t~~~Ei~~q~~------~~d~vv~pvG~GG~~aGi 194 (325)
T 3dwg_A 128 EGGSNT-----A-VATAKELAATNPSWVML-YQYGNPANTDSHYCGTGPELLADLP------EITHFVAGLGTTGTLMGT 194 (325)
T ss_dssp TTTHHH-----H-HHHHHHHHHHCTTSBCC-CTTTCHHHHHHHHHTHHHHHHHHCT------TCCEEEEECSSSHHHHHH
T ss_pred CCCHHH-----H-HHHHHHHHHhCCCeEeC-CCCCCHHHHHHHHHHHHHHHHHhcC------CCCEEEEecCchHHHHHH
Confidence 3 2432 2 23455555554334444 456789887 599999999999986 399999999999999999
Q ss_pred HHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCC----CCCceEEeccchHHHHHHHHHH
Q 019410 264 SLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGV----DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 264 ~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~----~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+.+++...|+++||||++.+++.. +.++++..++.+.. ..++++.|+|.+++.+++.++.
T Consensus 195 ~~~~k~~~p~~~vigVe~~~~~~~--~~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 258 (325)
T 3dwg_A 195 GRFLREHVANVKIVAAEPRYGEGV--YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVH 258 (325)
T ss_dssp HHHHHHHSTTCEEEEEEEECCGGG--GCCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEeeCCCcch--hccCcccCCcCcccccHhhCCeEEEECHHHHHHHHHHHHH
Confidence 999999899999999999997653 44556666655432 3678999999999999888765
No 10
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=2.5e-37 Score=294.41 Aligned_cols=232 Identities=19% Similarity=0.191 Sum_probs=185.7
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |.+||+| +||+++ +||||+|++.+++.+|
T Consensus 3 ~i~~~~~~TPL~~--~~~l~~~~g~~v~~K--------------------------~E~~~p--tGSfK~R~a~~~i~~a 52 (303)
T 2v03_A 3 TLEQTIGNTPLVK--LQRMGPDNGSEVWLK--------------------------LEGNNP--AGSVKDRAALSMIVEA 52 (303)
T ss_dssp SGGGGSSCCCEEE--CSSSSCSSSCEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHH
T ss_pred chHhhcCCCCcEE--CcccccccCCEEEEE--------------------------eccCCC--CCCcHHHHHHHHHHHH
Confidence 6777889999999 788876 7899999 777763 6889999999999999
Q ss_pred HHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-ccccc
Q 019410 117 VAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKI 191 (341)
Q Consensus 117 ~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~ 191 (341)
+++|. ++||++ |+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 53 ~~~g~~~~g~~vv~~--ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~Ga~v~~~~~~~~~~~- 121 (303)
T 2v03_A 53 EKRGEIKPGDVLIEA--TSGNTGIALAMIAALKGYRMKLLMPDNMS--------QERRAAMRAYGAELILVTKEQGMEG- 121 (303)
T ss_dssp HHTTCCCTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECTTTHHHH-
T ss_pred HHcCCCCCCCEEEEE--CCcHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-
Confidence 98887 789986 45999999999999999999999998875 45899999999999999863 3533
Q ss_pred CcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHH-HHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcC
Q 019410 192 GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG 270 (341)
Q Consensus 192 ~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~-G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~ 270 (341)
. .+.++++.++.+.. ++ .++.||.+.. ||.+++.||++|+. .++|+||+|+|||||++|++.++|..
T Consensus 122 ----~-~~~a~~~~~~~~~~-~~-~~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~ 189 (303)
T 2v03_A 122 ----A-RDLALEMANRGEGK-LL-DQFNNPDNPYAHYTTTGPEIWQQTG-----GRITHFVSSMGTTGTITGVSRFMREQ 189 (303)
T ss_dssp ----H-HHHHHHHHHTTSCE-EC-CTTTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHTS
T ss_pred ----H-HHHHHHHHHhCCCc-cc-CCcCChhhHHHhcCCcHHHHHHHhC-----CCCCEEEEEeCccHhHHHHHHHHHHh
Confidence 2 23455555542233 33 3457888765 78999999999986 25999999999999999999999999
Q ss_pred CCCCeEEEEeeCCCCccchHhHHHHhhcccCCC----CCCceEEeccchHHHHHHHHHH
Q 019410 271 TLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGV----DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 271 ~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~----~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
.|.+|||||++.+++.... ++++..+..+.. ..++++.|+|.+++.+++.++.
T Consensus 190 ~p~~~vigve~~~~~~~~~--~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 246 (303)
T 2v03_A 190 SKPVTIVGLQPEEGSSIPG--IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAV 246 (303)
T ss_dssp SSCCEEEEEEECTTCCCTT--CCCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCccccc--CCcCCCCCCCcccchHHCCEEEEECHHHHHHHHHHHHH
Confidence 9999999999998865332 334433333321 3578999999999999888765
No 11
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=1.2e-37 Score=296.44 Aligned_cols=233 Identities=19% Similarity=0.176 Sum_probs=183.6
Q ss_pred cccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHH
Q 019410 40 FSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAV 117 (341)
Q Consensus 40 ~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~ 117 (341)
+...+++|||++ +++|++ |.+||+| |||+++ +||||+|++.+++.+|+
T Consensus 3 i~~~~~~TPL~~--~~~l~~~~g~~v~~K--------------------------~E~~~p--tGSfK~R~a~~~l~~a~ 52 (304)
T 1ve1_A 3 VEGAIGKTPVVR--LAKVVEPDMAEVWVK--------------------------LEGLNP--GGSIKDRPAWYMIKDAE 52 (304)
T ss_dssp GGGGCCCCCEEE--CCSSSCTTSCEEEEE--------------------------EGGGST--TSBTTHHHHHHHHHHHH
T ss_pred hHHhcCCCCcEE--CcccccccCCEEEEE--------------------------ecccCC--CCcHHHHHHHHHHHHHH
Confidence 344568999999 788876 7899999 788753 78899999999999999
Q ss_pred HcCC----C--eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCcc-ccc
Q 019410 118 AQGA----D--CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEE-YSK 190 (341)
Q Consensus 118 ~~g~----~--~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~-~~~ 190 (341)
++|. + +||+ +|+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++... |++
T Consensus 53 ~~g~~~~g~~~~vv~--assGN~g~a~A~~a~~~G~~~~i~~p~~~~--------~~k~~~~~~~Ga~V~~~~~~~~~~~ 122 (304)
T 1ve1_A 53 ERGILRPGSGQVIVE--PTSGNTGIGLAMIAASRGYRLILTMPAQMS--------EERKRVLKAFGAELVLTDPERRMLA 122 (304)
T ss_dssp HTTSCCTTSCCEEEE--SCCSHHHHHHHHHHHHHTCEEEEEEETTCC--------HHHHHHHHHTTCEEEEECTTTHHHH
T ss_pred HcCCCCCCCccEEEE--eCCcHHHHHHHHHHHHcCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH
Confidence 8886 6 8887 578999999999999999999999998764 458999999999999998642 533
Q ss_pred cCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHH-HHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhc
Q 019410 191 IGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWG-YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWL 269 (341)
Q Consensus 191 ~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G-~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~ 269 (341)
. .+.++++.++ +..| ++.++.||.++.| |.+++.||++|+. .++|+||+|+|+|||++|++.++|.
T Consensus 123 -----~-~~~a~~l~~~-~~~~-~~~~~~n~~~~~g~~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~ 189 (304)
T 1ve1_A 123 -----A-REEALRLKEE-LGAF-MPDQFKNPANVRAHYETTGPELYEALE-----GRIDAFVYGSGTGGTITGVGRYLKE 189 (304)
T ss_dssp -----H-HHHHHHHHHH-HTCB-CCCTTTCHHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHT
T ss_pred -----H-HHHHHHHHhc-CCCE-eCCCCCChhHHHHHHHHHHHHHHHHcC-----CCCCEEEEecCCchhHHHHHHHHHH
Confidence 2 2234445443 2334 4456789999988 6999999999986 2599999999999999999999999
Q ss_pred CCCCCeEEEEeeCCCCccc-----hHhHHHHhhcccCC-C---CCCceEEeccchHHHHHHHHHH
Q 019410 270 GTLKAKVHAFSVCDDPDYF-----YDYTQGLLDGLNAG-V---DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 270 ~~~~~rVigVe~~g~~~~~-----~~~i~~l~~~~~~~-~---~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
..+.+|||||++.+++... .+.++++..+..+. + ..++++.|+|.+++.+++.++.
T Consensus 190 ~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 254 (304)
T 1ve1_A 190 RIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAR 254 (304)
T ss_dssp TCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred hCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHHHHHH
Confidence 9999999999999875322 12222232222221 1 3578999999999999888765
No 12
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.2e-37 Score=298.80 Aligned_cols=235 Identities=17% Similarity=0.108 Sum_probs=185.1
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++.+.+++|||++ +++|++ |.+||+| +||+++ +||||+|++.+++.+|
T Consensus 8 ~i~~~~~~TPL~~--~~~l~~~~g~~v~~K--------------------------~E~~~p--tGSfK~R~a~~~l~~a 57 (322)
T 1z7w_A 8 DVTELIGNTPLVY--LNNVAEGCVGRVAAK--------------------------LEMMEP--CSSVKDRIGFSMISDA 57 (322)
T ss_dssp SGGGGSSCCCEEE--CCGGGTTCSSEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEE--CccccccCCceEEEE--------------------------ecccCC--CCchHHHHHHHHHHHH
Confidence 7888899999999 787766 6899999 777763 7889999999999999
Q ss_pred HHcCC-----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-cccc
Q 019410 117 VAQGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSK 190 (341)
Q Consensus 117 ~~~g~-----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~ 190 (341)
+++|. ++||+ +|+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 58 ~~~G~~~~~~~~vv~--assGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~ 127 (322)
T 1z7w_A 58 EKKGLIKPGESVLIE--PTSGNTGVGLAFTAAAKGYKLIITMPASMS--------TERRIILLAFGVELVLTDPAKGMKG 127 (322)
T ss_dssp HHTTSCCTTTCEEEE--ECSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH
T ss_pred HHcCCCCCCCCEEEE--eCCCHHHHHHHHHHHHcCCCEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCCHHH
Confidence 99997 68887 467999999999999999999999998864 45899999999999999853 2432
Q ss_pred cCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhc
Q 019410 191 IGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWL 269 (341)
Q Consensus 191 ~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~ 269 (341)
. .+.++++.++.++.|+++ ++.|+.+. .||.+++.||++|+. .++|+||+|+|||||++|++.++|.
T Consensus 128 -----~-~~~a~~~~~~~~~~~~i~-~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~ 195 (322)
T 1z7w_A 128 -----A-IAKAEEILAKTPNGYMLQ-QFENPANPKIHYETTGPEIWKGTG-----GKIDGFVSGIGTGGTITGAGKYLKE 195 (322)
T ss_dssp -----H-HHHHHHHHHHCTTEEECC-TTTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHH
T ss_pred -----H-HHHHHHHHHhCCCeEeCC-CCCChhHHHHHHHHHHHHHHHHhc-----CCCCEEEEecCccHhHHHHHHHHHH
Confidence 2 234555655543456554 45577664 489999999999985 3699999999999999999999999
Q ss_pred CCCCCeEEEEeeCCCCccc-----hHhHHHHhhcccCC-C---CCCceEEeccchHHHHHHHHHH
Q 019410 270 GTLKAKVHAFSVCDDPDYF-----YDYTQGLLDGLNAG-V---DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 270 ~~~~~rVigVe~~g~~~~~-----~~~i~~l~~~~~~~-~---~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
..|++||+||++.+++... .+.++++..+..+. + ..++++.|+|.+.+.+++.++.
T Consensus 196 ~~p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 260 (322)
T 1z7w_A 196 QNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLAL 260 (322)
T ss_dssp HCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHHHHHH
Confidence 8999999999999875421 12233332222211 1 3578999999999988888765
No 13
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=1.9e-37 Score=296.61 Aligned_cols=235 Identities=17% Similarity=0.131 Sum_probs=183.4
Q ss_pred ccccCcCCCcccccCCCCCCC-CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH-NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAV 117 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~-g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~ 117 (341)
++.+.+++|||++ +++| + |.+||+| +|++++ +||||+|++.+++.+|.
T Consensus 6 ~i~~~~~~TPL~~--l~~l-~~g~~i~~K--------------------------~E~~~p--tGSfK~R~a~~~i~~a~ 54 (316)
T 1y7l_A 6 DNSYSIGNTPLVR--LKHF-GHNGNVVVK--------------------------IEGRNP--SYSVKCRIGANMVWQAE 54 (316)
T ss_dssp SGGGGCCCCCEEE--CSSS-SSTTCEEEE--------------------------ETTSSG--GGBTHHHHHHHHHHHHH
T ss_pred hhHHhcCCCCcEE--CccC-CCCCEEEEE--------------------------eccCCC--CCChHHHHHHHHHHHHH
Confidence 7788899999999 6766 5 7899999 666643 68889999999999999
Q ss_pred HcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-cccccC
Q 019410 118 AQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIG 192 (341)
Q Consensus 118 ~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~~ 192 (341)
++|. ++||++ |+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 55 ~~g~~~~~~~vv~~--ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~-- 122 (316)
T 1y7l_A 55 KDGTLTKGKEIVDA--TSGNTGIALAYVAAARGYKITLTMPETMS--------LERKRLLCGLGVNLVLTEGAKGMKG-- 122 (316)
T ss_dssp HTTSSCTTCEEEES--CCSHHHHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH--
T ss_pred HcCCCCCCCEEEEe--CCcHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEeCCCCCHHH--
Confidence 9887 788874 56999999999999999999999998865 45899999999999999863 2432
Q ss_pred cHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHH-HHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC
Q 019410 193 SVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT 271 (341)
Q Consensus 193 ~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~-G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~ 271 (341)
. .+.++++.++.+..|+++.++.||.+.. ||.+++.||++|+. .++|+||+|+|||||++|++.++++.+
T Consensus 123 ---~-~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 193 (316)
T 1y7l_A 123 ---A-IAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTD-----GKVDVVVAGVGTGGSITGISRAIKLDF 193 (316)
T ss_dssp ---H-HHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTT-----TCEEEEEEECSSSHHHHHHHHHHHHTS
T ss_pred ---H-HHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHcC-----CCCCEEEEeCCccccHHHHHHHHHHhC
Confidence 2 2345555555445623444567888765 69999999999986 259999999999999999999999988
Q ss_pred -CCCeEEEEeeCCCCccchHh-------HHHHhhcccCC-----C---CCCceEEeccchHHHHHHHHHH
Q 019410 272 -LKAKVHAFSVCDDPDYFYDY-------TQGLLDGLNAG-----V---DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 272 -~~~rVigVe~~g~~~~~~~~-------i~~l~~~~~~~-----~---~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
|.+|||||++.+++....-+ -..++++++.+ + ..++++.|+|.+++.+++.++.
T Consensus 194 ~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 263 (316)
T 1y7l_A 194 GKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMA 263 (316)
T ss_dssp CCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCchhhHhhCCEEEEECHHHHHHHHHHHHH
Confidence 99999999999975322100 00112232221 1 2579999999999999888765
No 14
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=3.4e-37 Score=298.91 Aligned_cols=237 Identities=15% Similarity=0.076 Sum_probs=179.8
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
.+...+++|||++ +++|++ |++||+| +|.+|| +||||+|++.+++.+|
T Consensus 28 ~i~~lIG~TPLv~--~~~Ls~~~G~~IylK-------~E~lnp---------------------tGSfK~RgA~~~i~~a 77 (344)
T 3vc3_A 28 HVSQLIGRTPLVY--LNKVTEGCGAYVAVK-------QEMMQP---------------------TASIADRPAYAMITDA 77 (344)
T ss_dssp SGGGGSCCCCEEE--CCSTTTTCCSEEEEE-------EGGGST---------------------TSBTTHHHHHHHHHHH
T ss_pred cHhhhcCCCceEE--CcccchhhCCEEEEE-------ecCCCC---------------------CCCcHHHHHHHHHHHH
Confidence 3555678999999 888888 8999999 444444 5778999999999999
Q ss_pred HHcCC-----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCcccccc
Q 019410 117 VAQGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKI 191 (341)
Q Consensus 117 ~~~g~-----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~ 191 (341)
+++|. ++||+. |+||||+|+|++|+++|++|+||||..++ ..|+..+++|||+|+.++....
T Consensus 78 ~~~g~l~~g~~~Vv~a--SsGN~g~alA~~aa~~G~~~~IvmP~~~~--------~~k~~~~~~~GA~Vv~v~~~~~--- 144 (344)
T 3vc3_A 78 EEKNLITPGKTTLIEP--TSGNMGISMAFMAAMKGYKMVLTMPSYTS--------LERRVTMRAFGAELILTDPAKG--- 144 (344)
T ss_dssp HHTTCCCTTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGH---
T ss_pred HHcCCCCCCCCEEEEe--CCcHHHHHHHHHHHHcCCcEEEEECCCCh--------HHHHHHHHHcCCEEEEECCCCc---
Confidence 98874 578864 56999999999999999999999999875 4589999999999999975321
Q ss_pred CcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcC
Q 019410 192 GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG 270 (341)
Q Consensus 192 ~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~ 270 (341)
........++...+. +. .+.+.++.||... .||.|++.||++|+. ..+|+||+|+|+||+++|++.++|..
T Consensus 145 -~~~~~~~~~~~~~~~-~~-~~~~~~~~np~~~~a~~~t~g~EI~eq~~-----~~~d~vv~~vGgGG~~~Gi~~~~k~~ 216 (344)
T 3vc3_A 145 -MGGTVKKAYELLENT-PN-AHMLQQFSNPANTQVHFETTGPEIWEDTN-----GQVDIFVMGIGSGGTVSGVGQYLKSK 216 (344)
T ss_dssp -HHHHHHHHHHHHHHS-TT-EECCCTTTCHHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHhhc-cC-ceeccccccchhHHHHHHHHHHHHHHHhC-----CCceEEEEecCCccchHHHhhhhHhh
Confidence 111112222222332 23 4445566788764 568899999999985 47999999999999999999999999
Q ss_pred CCCCeEEEEeeCCCCccc-----hHhHHHHhhcccCCC----CCCceEEeccchHHHHHHHHHHH
Q 019410 271 TLKAKVHAFSVCDDPDYF-----YDYTQGLLDGLNAGV----DSRDIVNIQNVSVYMTFKNILMN 326 (341)
Q Consensus 271 ~~~~rVigVe~~g~~~~~-----~~~i~~l~~~~~~~~----~~~~iv~v~d~~~~~~~~~~~~~ 326 (341)
.|+++||+||+.+++... .+.+.++...+...+ ..|+++.|.|.+++...+.+++.
T Consensus 217 ~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~~L~~~ 281 (344)
T 3vc3_A 217 NPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALK 281 (344)
T ss_dssp CTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHH
T ss_pred CCCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceEEEEECHHHHHHHHHHHHHH
Confidence 999999999998865321 223333322222222 36789999999998888877653
No 15
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=2.8e-37 Score=299.18 Aligned_cols=235 Identities=17% Similarity=0.127 Sum_probs=185.8
Q ss_pred ccccCcCCCcccccCCCCCCC------CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH------NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFL 112 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~------g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~l 112 (341)
++.+.+++|||++ +++|++ |++||+| +||+++ +||||+|++.++
T Consensus 16 ~i~~~~g~TPL~~--~~~l~~~~~~~~g~~v~~K--------------------------~E~~~p--tGSfKdR~a~~~ 65 (343)
T 2pqm_A 16 NILETIGGTPLVE--LHGVTEHPRIKKGTRILVK--------------------------LEYFNP--MSSVKDRVGFNI 65 (343)
T ss_dssp SGGGGSSCCCEEE--CCGGGCSTTSCTTCEEEEE--------------------------EGGGST--TSBTHHHHHHHH
T ss_pred HHHhhcCCCCeEE--CCccccccccccCcEEEEE--------------------------eccCCC--CCChHHHHHHHH
Confidence 6788889999999 677653 6899999 777754 788999999999
Q ss_pred HHHHHHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-c
Q 019410 113 MADAVAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-E 187 (341)
Q Consensus 113 l~~A~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~ 187 (341)
+.+|.++|. ++||++ |+||||+|+|++|+.+|++|+||||..++ ..|+++++.+||+|+.++.. .
T Consensus 66 l~~a~~~g~~~~g~~vv~a--SsGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~ 135 (343)
T 2pqm_A 66 VYQAIKDGRLKPGMEIIES--TSGNTGIALCQAGAVFGYRVNIAMPSTMS--------VERQMIMKAFGAELILTEGKKG 135 (343)
T ss_dssp HHHHHHHTSSCTTCEEEEE--CSSHHHHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGH
T ss_pred HHHHHHcCCCCCCCEEEEE--CCcHHHHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCC
Confidence 999998887 688886 45999999999999999999999998864 45899999999999999863 2
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHH
Q 019410 188 YSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 266 (341)
Q Consensus 188 ~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~ 266 (341)
|++ . .+.++++.++.+..|+++.++.|+.++ .||.+++ ||++|+. .++|+||+|+|||||++|++.+
T Consensus 136 ~~~-----~-~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~~t~~-Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~ 203 (343)
T 2pqm_A 136 MPG-----A-IEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTD-----GEVDIVVSAVGTSGTVIGVAEK 203 (343)
T ss_dssp HHH-----H-HHHHHHHHHHSTTTEEECCTTTCHHHHHHHHHHHH-HHHHHTT-----TCEEEEEEECSSSHHHHHHHHH
T ss_pred HHH-----H-HHHHHHHHHhCCCcEEECCCCCChhHHHHHHHHHH-HHHHHcC-----CCCCEEEEecCCchhHHHHHHH
Confidence 432 2 234555555544565666677889875 6899999 9999986 3699999999999999999999
Q ss_pred HhcCCCCCeEEEEeeCCCCccch-----HhHHHHhhcccCC-C---CCCceEEeccchHHHHHHHHHH
Q 019410 267 SWLGTLKAKVHAFSVCDDPDYFY-----DYTQGLLDGLNAG-V---DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 267 ~k~~~~~~rVigVe~~g~~~~~~-----~~i~~l~~~~~~~-~---~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+|..+|++|||||++.+++.... ..++++..++.+. + ..++++.|+|.+++.+++.++.
T Consensus 204 ~k~~~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~~ 271 (343)
T 2pqm_A 204 LKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVK 271 (343)
T ss_dssp HHHHCTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 99989999999999998744221 1222332222121 1 3578999999999999888765
No 16
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=3.4e-38 Score=306.02 Aligned_cols=232 Identities=18% Similarity=0.181 Sum_probs=182.7
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |++||+| |||+++ +||||+|++.+++.++
T Consensus 18 ~i~~~i~~TPL~~--~~~l~~~~g~~i~~K--------------------------~E~~~p--tGSfK~Rga~~~i~~a 67 (346)
T 3l6b_A 18 NIRDSIHLTPVLT--SSILNQLTGRNLFFK--------------------------CELFQK--TGSFKIRGALNAVRSL 67 (346)
T ss_dssp HHGGGSCCCCEEC--CHHHHHHHTSEEEEE--------------------------EGGGSG--GGBTHHHHHHHHHHTT
T ss_pred HHhcccCCCCeEE--chhhHHHhCCeEEEE--------------------------eCCCCC--CCCcHHHHHHHHHHHH
Confidence 5566778999999 777766 8999999 777764 6889999999999998
Q ss_pred HHc----CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccC
Q 019410 117 VAQ----GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIG 192 (341)
Q Consensus 117 ~~~----g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~ 192 (341)
.++ +.++||++ |+||||+|+|++|+++|++|+||||..++ ..|+++++.|||+|+.++.. |++
T Consensus 68 ~~~g~~~~~~~vv~~--SsGNhg~a~A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~v~~~-~~~-- 134 (346)
T 3l6b_A 68 VPDALERKPKAVVTH--SSGNHGQALTYAAKLEGIPAYIVVPQTAP--------DCKKLAIQAYGASIVYCEPS-DES-- 134 (346)
T ss_dssp C-----CCCSCEEEE--CSSHHHHHHHHHHHHTTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECSS-HHH--
T ss_pred HHhccccCCCEEEEe--CCCHHHHHHHHHHHHhCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCC-HHH--
Confidence 774 66789986 46999999999999999999999998875 45899999999999999864 543
Q ss_pred cHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCC
Q 019410 193 SVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL 272 (341)
Q Consensus 193 ~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~ 272 (341)
. .+.++++.++.+..|+.|++ ||....||.+++.||++|++ .+|+||+|+|||||++|++.++|..+|
T Consensus 135 ---~-~~~a~~l~~~~~~~~i~~~~--np~~~~g~~t~~~Ei~~q~~------~~d~vvv~vG~GG~~aGi~~~~k~~~p 202 (346)
T 3l6b_A 135 ---R-ENVAKRVTEETEGIMVHPNQ--EPAVIAGQGTIALEVLNQVP------LVDALVVPVGGGGMLAGIAITVKALKP 202 (346)
T ss_dssp ---H-HHHHHHHHHHHTCEECCSSS--CHHHHHHHHHHHHHHHHHST------TCCEEEEECSSSHHHHHHHHHHHHHCT
T ss_pred ---H-HHHHHHHHHhcCCEEECCCC--ChHHHHHHHHHHHHHHHhCC------CCCEEEEecCccHHHHHHHHHHHHhCC
Confidence 1 23344454443333444443 88889999999999999985 599999999999999999999999899
Q ss_pred CCeEEEEeeCCCCccch-----------HhHHHHhhcccCCC----------CCCceEEeccchHHHHHHHHHH
Q 019410 273 KAKVHAFSVCDDPDYFY-----------DYTQGLLDGLNAGV----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 273 ~~rVigVe~~g~~~~~~-----------~~i~~l~~~~~~~~----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+++||||++.++..... ..+.++++++...+ ..++++.|+|.+.+.+++.++.
T Consensus 203 ~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 276 (346)
T 3l6b_A 203 SVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWE 276 (346)
T ss_dssp TSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCcHHHHHHHHHcCCeEEEECHHHHHHHHHHHHH
Confidence 99999999998753211 11234444544222 2578999999999998887764
No 17
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.4e-37 Score=303.62 Aligned_cols=234 Identities=18% Similarity=0.158 Sum_probs=183.6
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
+......+|||++ +++|++ |++||+| |||+++ +||||+|++.+++.++
T Consensus 39 ~~~~~~~~TPL~~--~~~l~~~~g~~v~~K--------------------------~E~~~p--tGSfK~Rga~~~i~~a 88 (364)
T 4h27_A 39 SGEPLHVKTPIRD--SMALSKMAGTSVYLK--------------------------MDSAQP--SGSFKIRGIGHFCKRW 88 (364)
T ss_dssp --CCSSCCCCEEE--EHHHHHHHTSEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHH
T ss_pred hcCCCCCcCCeEE--ChhhHHHhCCEEEEE--------------------------eCCCCC--CCCHHHHHHHHHHHHH
Confidence 4455678999999 777766 8899999 788764 7999999999999999
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHH
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTL 196 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~ 196 (341)
.++|.++||+++ +||||+|+|++|+++|++|+||||..++ ..+++.++.+||+|+.++. .|+++
T Consensus 89 ~~~g~~~vv~aS--sGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~Vv~v~~-~~~~a----- 152 (364)
T 4h27_A 89 AKQGCAHFVCSS--SGNAGMAAAYAARQLGVPATIVVPGTTP--------ALTIERLKNEGATVKVVGE-LLDEA----- 152 (364)
T ss_dssp HHTTCCEEEECC--SSHHHHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHTTTCEEEEECS-STTHH-----
T ss_pred HhcCCCEEEEeC--CChHHHHHHHHHHHhCCceEEEECCCCC--------HHHHHHHHHcCCEEEEECC-CHHHH-----
Confidence 999999999864 4999999999999999999999998875 3579999999999999986 46432
Q ss_pred HHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC-CCCe
Q 019410 197 TNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAK 275 (341)
Q Consensus 197 ~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~-~~~r 275 (341)
.+.++++.++.++.++++. +.|+.++.||.+++.||++|+. ..+|+||+|+|||||++|++.++|..+ ++++
T Consensus 153 -~~~a~~l~~~~~~~~~~~~-~~np~~~~G~~t~~~Ei~~q~~-----~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~ 225 (364)
T 4h27_A 153 -FELAKALAKNNPGWVYIPP-FDDPLIWEGHASIVKELKETLW-----EKPGAIALSVGGGGLLCGVVQGLQEVGWGDVP 225 (364)
T ss_dssp -HHHHHHHHHHSTTEEEECS-SCSHHHHHHHTHHHHHHHHHCS-----SCCSEEEEECSSSHHHHHHHHHHHHTTCTTCC
T ss_pred -HHHHHHHHHhCCCeEEeCC-CCCHHHHHHHHHHHHHHHHHhC-----CCCCEEEEcCCccHHHHHHHHHHHHhCCCCCe
Confidence 2345556555324444443 4689999999999999999986 369999999999999999999999887 7899
Q ss_pred EEEEeeCCCCccch----------HhHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHH
Q 019410 276 VHAFSVCDDPDYFY----------DYTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 276 VigVe~~g~~~~~~----------~~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
|+||++.++..... +.+..++++++... ..++.+.|+|.+++.+++.++.
T Consensus 226 vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 296 (364)
T 4h27_A 226 VIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVD 296 (364)
T ss_dssp EEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHTTSCEEEEEECHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHHHHHHHHhcCCEEEEECHHHHHHHHHHHHH
Confidence 99999998764321 11223344443321 1235567999999998888764
No 18
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=3.5e-37 Score=299.10 Aligned_cols=232 Identities=17% Similarity=0.192 Sum_probs=185.0
Q ss_pred ccccCcCCCcccccCC--CCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNL--PNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMA 114 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l--~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~ 114 (341)
++.+++++|||++ + ++|++ |++||+| |||+++ +||||+|++.+++.
T Consensus 21 ~v~~~~g~TPL~~--~~~~~l~~~~g~~v~~K--------------------------~E~~~p--tgS~KdR~a~~~l~ 70 (351)
T 3aey_A 21 VISLLEGSTPLIP--LKGPEEARKKGIRLYAK--------------------------YEGLNP--TGSFKDRGMTLAVS 70 (351)
T ss_dssp CCCSCCCCCCEEE--CCCCHHHHTTTCEEEEE--------------------------EGGGST--TSBTTHHHHHHHHH
T ss_pred ceecCCCCCCeee--cCchhhHHHhCCeEEEE--------------------------ecCCCC--cccHHHHHHHHHHH
Confidence 7889999999999 6 76654 7899999 888863 89999999999999
Q ss_pred HHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCc
Q 019410 115 DAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGS 193 (341)
Q Consensus 115 ~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~ 193 (341)
+|.++|.++||++ |+||||+|+|++|+++|++|+||||.. ++ ..|+++++.+||+|+.++.. |++.
T Consensus 71 ~a~~~g~~~vv~~--SsGN~g~alA~~a~~~G~~~~iv~p~~~~~--------~~k~~~~~~~GA~V~~v~~~-~~~~-- 137 (351)
T 3aey_A 71 KAVEGGAQAVACA--STGNTAASAAAYAARAGILAIVVLPAGYVA--------LGKVAQSLVHGARIVQVEGN-FDDA-- 137 (351)
T ss_dssp HHHHTTCSEEEES--CSSHHHHHHHHHHHHHTSEEEEEEETTCSC--------HHHHHHHHHTTCEEEEEESC-HHHH--
T ss_pred HHHhcCCCEEEEe--CCCHHHHHHHHHHHHcCCCEEEEECCCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH--
Confidence 9999999999984 789999999999999999999999987 54 46899999999999999864 6432
Q ss_pred HHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC--
Q 019410 194 VTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-- 271 (341)
Q Consensus 194 ~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~-- 271 (341)
.+.++++.++. ..++++ + .|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.++++..
T Consensus 138 ----~~~a~~l~~~~-~~~~~~-~-~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~ 205 (351)
T 3aey_A 138 ----LRLTQKLTEAF-PVALVN-S-VNPHRLEGQKTLAFEVVDELG-----DAPHYHALPVGNAGNITAHWMGYKAYHAL 205 (351)
T ss_dssp ----HHHHHHHHHHS-SEEECS-T-TCHHHHHHHHHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhc-CcEecC-C-CCccceeeeeeHHHHHHHHcC-----CCCCEEEEecCchHHHHHHHHHHHHHHhc
Confidence 23345555544 356664 3 789999999999999999996 358999999999999999999998754
Q ss_pred ----CCCeEEEEeeCCCCccchHh----HHHHhhcccCCC-------------CCCceEEeccchHHHHHHHHHH
Q 019410 272 ----LKAKVHAFSVCDDPDYFYDY----TQGLLDGLNAGV-------------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 272 ----~~~rVigVe~~g~~~~~~~~----i~~l~~~~~~~~-------------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+.+||+||++.++......+ ...+++++.... ..++++.|+|.+++.+++.++.
T Consensus 206 G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 280 (351)
T 3aey_A 206 GKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAR 280 (351)
T ss_dssp TSCSSCCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred cccCCCCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 36899999999865421111 012334443221 1247899999999999888764
No 19
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=7.3e-37 Score=299.45 Aligned_cols=235 Identities=18% Similarity=0.156 Sum_probs=184.0
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++....++|||++ +++|++ |++||+| +||+++ +||||+|++.+++.+|
T Consensus 39 ~~~~~~~~TPL~~--l~~l~~~~g~~i~~K--------------------------~E~~~p--tGSfKdRga~~~l~~a 88 (372)
T 1p5j_A 39 SGEPLHVKTPIRD--SMALSKMAGTSVYLK--------------------------MDSAQP--SGSFKIRGIGHFCKRW 88 (372)
T ss_dssp -CCCSSCCCCEEE--EHHHHHHHTSCEEEE--------------------------CGGGSG--GGBTTHHHHHHHHHHH
T ss_pred cccCCCCCCCceE--cHhhHHHhCCEEEEE--------------------------EcCCCC--CCChHHHHHHHHHHHH
Confidence 4456678999999 677765 7899999 777753 7889999999999999
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHH
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTL 196 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~ 196 (341)
.++|.++||+++ +||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++. .|+++
T Consensus 89 ~~~g~~~vv~aS--sGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~-~~~~a----- 152 (372)
T 1p5j_A 89 AKQGCAHFVCSS--AGNAGMAAAYAARQLGVPATIVVPGTTP--------ALTIERLKNEGATCKVVGE-LLDEA----- 152 (372)
T ss_dssp HHTTCCEEEECC--SSHHHHHHHHHHHHHTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-CHHHH-----
T ss_pred HHcCCCEEEEeC--CCHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHhcCCEEEEECC-CHHHH-----
Confidence 989999999864 4999999999999999999999998874 4589999999999999986 46432
Q ss_pred HHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC-CCCe
Q 019410 197 TNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAK 275 (341)
Q Consensus 197 ~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~-~~~r 275 (341)
.+.++++.++.++.++++. +.|+.+++||.+++.||++|+. ..+|+||+|+|||||++|++.++|..+ +++|
T Consensus 153 -~~~a~~l~~~~~~~~~v~~-~~n~~~~~G~~t~~~Ei~~ql~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~ 225 (372)
T 1p5j_A 153 -FELAKALAKNNPGWVYIPP-FDDPLIWEGHASIVKELKETLW-----EKPGAIALSVGGGGLLCGVVQGLQECGWGDVP 225 (372)
T ss_dssp -HHHHHHHHHHSTTEEECCS-SCCHHHHHHHTHHHHHHHHHCS-----SCCSEEEEECSSSHHHHHHHHHHHHTTCTTCC
T ss_pred -HHHHHHHHHhcCCcEEeCC-CCCHHHHhhHHHHHHHHHHHcC-----CCCCEEEEecCCchHHHHHHHHHHHhCCCCce
Confidence 2334555554224455532 3489999999999999999985 369999999999999999999999886 8899
Q ss_pred EEEEeeCCCCccchH----------hHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHHH
Q 019410 276 VHAFSVCDDPDYFYD----------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILMN 326 (341)
Q Consensus 276 VigVe~~g~~~~~~~----------~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~~ 326 (341)
||||++.++...... .+..++++++... ..++++.|+|.+++.+++.++..
T Consensus 226 vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~ 297 (372)
T 1p5j_A 226 VIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDD 297 (372)
T ss_dssp EEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHHcCCceecCCCceeecccCCCCCCHHHHHHHhhcCCEEEEECHHHHHHHHHHHHHH
Confidence 999999987543210 0112333433221 23568999999999998887653
No 20
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.6e-37 Score=299.39 Aligned_cols=233 Identities=17% Similarity=0.191 Sum_probs=186.4
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++.+.+++|||++ +++|++ |++||+| |||+++ +||||+|++.+++.+|
T Consensus 31 ~v~~~~g~TPL~~--~~~l~~~~g~~i~~K--------------------------~E~~~p--tgSfKdR~a~~~l~~a 80 (360)
T 2d1f_A 31 PVTLLEGGTPLIA--ATNLSKQTGCTIHLK--------------------------VEGLNP--TGSFKDRGMTMAVTDA 80 (360)
T ss_dssp CCCCCCCCCCEEE--CHHHHHHHSSEEEEE--------------------------EGGGST--TSBTTHHHHHHHHHHH
T ss_pred ccccccCCCCCee--chhhHHHhCCeEEEE--------------------------ECCCCC--CcCHHHHHHHHHHHHH
Confidence 7889999999999 777765 8899999 888863 8999999999999999
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHH
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVT 195 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~ 195 (341)
+++|.++||++ |+||||+|+|++|+++|++|+||||.. ++ ..|+++++++||+|+.++.. |++.
T Consensus 81 ~~~g~~~vv~a--SsGN~g~alA~~a~~~G~~~~i~~p~~~~~--------~~k~~~~~~~GA~v~~v~~~-~~~~---- 145 (360)
T 2d1f_A 81 LAHGQRAVLCA--STGNTSASAAAYAARAGITCAVLIPQGKIA--------MGKLAQAVMHGAKIIQIDGN-FDDC---- 145 (360)
T ss_dssp HHTTCSEEEEC--CSSHHHHHHHHHHHHHTCEEEEEECSSCCC--------HHHHHHHHHTTCEEEEBSSC-HHHH----
T ss_pred HHCCCCEEEEe--CCcHHHHHHHHHHHHcCCcEEEEEcCCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH----
Confidence 99999999984 789999999999999999999999987 54 46899999999999999864 6432
Q ss_pred HHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC----
Q 019410 196 LTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT---- 271 (341)
Q Consensus 196 ~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~---- 271 (341)
...++++.++.+..|+++ + .|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.+++...
T Consensus 146 --~~~a~~l~~~~~~~~~i~-~-~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~ 216 (360)
T 2d1f_A 146 --LELARKMAADFPTISLVN-S-VNPVRIEGQKTAAFEIVDVLG-----TAPDVHALPVGNAGNITAYWKGYTEYHQLGL 216 (360)
T ss_dssp --HHHHHHHHHHCTTEEECS-T-TCHHHHHHHTHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHTTS
T ss_pred --HHHHHHHHHhcCCeEEcC-C-CChhhhhhHHHHHHHHHHHcC-----CCCCEEEEeCCchHHHHHHHHHHHHHHhccc
Confidence 233555655543457665 3 799999999999999999996 358999999999999999999998753
Q ss_pred --CCCeEEEEeeCCCCccchHh----HHHHhhcccCCC-------------CCCceEEeccchHHHHHHHHHH
Q 019410 272 --LKAKVHAFSVCDDPDYFYDY----TQGLLDGLNAGV-------------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 272 --~~~rVigVe~~g~~~~~~~~----i~~l~~~~~~~~-------------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+.+||+||++.++......+ ...+++++.... ..++++.|+|.+.+.+++.++.
T Consensus 217 ~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 289 (360)
T 2d1f_A 217 IDKLPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVAR 289 (360)
T ss_dssp CSSCCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred cccCceEEEEecCCCCHHhcCCccCCccchHHHhCCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 36899999999865421111 012334443221 1247899999999999888764
No 21
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=7.9e-37 Score=296.67 Aligned_cols=232 Identities=19% Similarity=0.225 Sum_probs=185.2
Q ss_pred ccccCcCCCcccccCCCCCCC--Cce--EEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTE--VWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMA 114 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~--v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~ 114 (341)
++.+.+++|||++ +++|++ |++ ||+| |||+++ +||||+|++.+++.
T Consensus 23 ~v~~~~g~TPL~~--~~~l~~~~g~~~~i~~K--------------------------~E~~~p--tGS~KdR~a~~~l~ 72 (352)
T 2zsj_A 23 IVTLYEGNTPLIE--ADNLARAIGFKGKIYLK--------------------------YEGLNP--TGSFKDRGMTLAIS 72 (352)
T ss_dssp CCCCCCCCCCEEE--CHHHHHHHTCCSEEEEE--------------------------EGGGST--TSBTTHHHHHHHHH
T ss_pred ceecccCCCCCee--hHHHHHHhCCCceEEEE--------------------------ECCCCC--CccHHHHHHHHHHH
Confidence 7889999999999 777765 787 9999 888863 89999999999999
Q ss_pred HHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCc
Q 019410 115 DAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGS 193 (341)
Q Consensus 115 ~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~ 193 (341)
+|.++|.++||++ |+||||+|+|++|+++|++|+||||.. ++ ..|+++++++||+|+.++.+ |++.
T Consensus 73 ~a~~~g~~~vv~~--SsGN~g~alA~~a~~~G~~~~i~~p~~~~~--------~~k~~~~~~~GA~v~~v~~~-~~~~-- 139 (352)
T 2zsj_A 73 KAVEAGKRAVICA--STGNTSASAAAYAARAGLRAYVLLPKGAVA--------IGKLSQAMIYGAKVLAIQGT-FDDA-- 139 (352)
T ss_dssp HHHHTTCCEEEEC--CSSHHHHHHHHHHHHHTCEEEEEEEGGGCC--------HHHHHHHHHTTCEEEEESSC-HHHH--
T ss_pred HHHhcCCCEEEEe--CCchHHHHHHHHHHhcCCcEEEEECCCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH--
Confidence 9999999999984 789999999999999999999999986 54 46899999999999999873 6432
Q ss_pred HHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC--
Q 019410 194 VTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-- 271 (341)
Q Consensus 194 ~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~-- 271 (341)
.+.++++.++. ..++++ + .|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.+++...
T Consensus 140 ----~~~a~~l~~~~-~~~~~~-~-~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~ 207 (352)
T 2zsj_A 140 ----LNIVRKIGENF-PVEIVN-S-VNPYRIEGQKTAAFEICDTLG-----EAPDYHFIPVGNAGNITAYWKGFKIYYEE 207 (352)
T ss_dssp ----HHHHHHHHHHS-SEEECS-T-TCTHHHHHHTHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHc-CcEECC-C-CCcchhhhHhHHHHHHHHHcC-----CCCCEEEEeCCCcHHHHHHHHHHHHHHhc
Confidence 23345555554 356664 3 789999999999999999996 358999999999999999999998753
Q ss_pred ----CCCeEEEEeeCCCCccchHh----HHHHhhcccCCC-------------CCCceEEeccchHHHHHHHHHH
Q 019410 272 ----LKAKVHAFSVCDDPDYFYDY----TQGLLDGLNAGV-------------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 272 ----~~~rVigVe~~g~~~~~~~~----i~~l~~~~~~~~-------------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+.+||+||++.++......+ ...+++++.... ..++++.|+|.+++.+++.++.
T Consensus 208 G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 282 (352)
T 2zsj_A 208 GKITKLPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIAS 282 (352)
T ss_dssp TSCSSCCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 36899999999865432111 012334443221 1247899999999998888764
No 22
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=1.3e-36 Score=289.38 Aligned_cols=233 Identities=18% Similarity=0.185 Sum_probs=182.6
Q ss_pred cccccCcCCCcccccCCCCCCCCceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHH
Q 019410 38 HVFSLGHFPTPIHKWNLPNLPHNTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAV 117 (341)
Q Consensus 38 ~~~~~~~~~TPl~~~~l~~L~~g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~ 117 (341)
|.+.+..++|||++ +++|+ .+||+| +||+++ +||||+|++.+++.+|+
T Consensus 12 ~~~~~~~~~TPL~~--l~~l~--~~v~~K--------------------------~E~~~p--tGSfK~R~a~~~l~~a~ 59 (303)
T 1o58_A 12 HMMERLIGSTPIVR--LDSID--SRIFLK--------------------------LEKNNP--GGSVKDRPALFMILDAE 59 (303)
T ss_dssp CHHHHHSCCCCEEE--CTTTC--TTEEEE--------------------------EGGGST--TSBTTHHHHHHHHHHHH
T ss_pred hhhhhccCCCCeEE--CccCC--ceEEEE--------------------------ecCCCC--CCChHHHHHHHHHHHHH
Confidence 45567889999999 77776 689999 777763 79999999999999999
Q ss_pred HcCC--CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-cccccCcH
Q 019410 118 AQGA--DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSV 194 (341)
Q Consensus 118 ~~g~--~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~~~~~~ 194 (341)
++|. ++||+ +|+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.. .|++
T Consensus 60 ~~g~~~~~vv~--aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~---- 125 (303)
T 1o58_A 60 KRGLLKNGIVE--PTSGNMGIAIAMIGAKRGHRVILTMPETMS--------VERRKVLKMLGAELVLTPGELGMKG---- 125 (303)
T ss_dssp HTTCCTTCEEE--ECSSHHHHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH----
T ss_pred HcCCCCCCEEE--ECchHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH----
Confidence 8887 67885 477999999999999999999999998864 45899999999999999863 2543
Q ss_pred HHHHHHHHHHHHhCCCcEEeCCCCCchhHHH-HHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCC
Q 019410 195 TLTNILKEKLLKEGRRPYVIPVGGSNSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLK 273 (341)
Q Consensus 195 ~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~-G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~ 273 (341)
.. +.++++.++. +.|+ +.++.||.++. ||.+++.||++|+. ..+|+||+|+|+|||++|++.++|..+|+
T Consensus 126 -~~-~~a~~~~~~~-~~~~-~~~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~ 196 (303)
T 1o58_A 126 -AV-EKALEISRET-GAHM-LNQFENPYNVYSHQFTTGPEILKQMD-----YQIDAFVAGVGTGGTISGVGRVLKGFFGN 196 (303)
T ss_dssp -HH-HHHHHHHHHH-CCBC-CCTTTCHHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHHHHGG
T ss_pred -HH-HHHHHHHHhc-CeEe-CCCCCCHHHHHHHHHHHHHHHHHHcC-----CCCCEEEEeeCCcccHHHHHHHHHHhCCC
Confidence 22 2344554443 3444 45678898765 78999999999986 25999999999999999999999988888
Q ss_pred -CeEEEEeeCCCCccch-----HhHHHHhhcccCC-C---CCCceEEeccchHHHHHHHHHH
Q 019410 274 -AKVHAFSVCDDPDYFY-----DYTQGLLDGLNAG-V---DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 274 -~rVigVe~~g~~~~~~-----~~i~~l~~~~~~~-~---~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+|||||++.+++.... ..++++..+..+. + ..++++.|+|.+++.+++.++.
T Consensus 197 ~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 258 (303)
T 1o58_A 197 GVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAK 258 (303)
T ss_dssp GSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 9999999998754321 1222332222111 1 3578999999999999888765
No 23
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-37 Score=291.90 Aligned_cols=228 Identities=18% Similarity=0.210 Sum_probs=179.9
Q ss_pred cCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHHcCC
Q 019410 44 HFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVAQGA 121 (341)
Q Consensus 44 ~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~~g~ 121 (341)
..+|||++ +++|++ |++||+| |||+++ +||||+|++.+++.+|.++|.
T Consensus 5 ~~~TPL~~--~~~l~~~~g~~v~~K--------------------------~E~~~p--tgS~K~R~a~~~l~~a~~~g~ 54 (318)
T 2rkb_A 5 HVVTPLLE--SWALSQVAGMPVFLK--------------------------CENVQP--SGSFKIRGIGHFCQEMAKKGC 54 (318)
T ss_dssp SCCCCEEE--EHHHHHHHTSCEEEE--------------------------EGGGST--TSBTTHHHHHHHHHHHHHTTC
T ss_pred CccCCcee--hHhhHHHhCCeEEEE--------------------------ecCCCC--CCCHHHHHHHHHHHHHHHcCC
Confidence 47899999 677765 7899999 788753 699999999999999999999
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHHHHHHH
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILK 201 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a 201 (341)
++||++ |+||||+|+|++|+++|++|++|||..++ ..+++.++.+||+|+.++. .|++. .+.+
T Consensus 55 ~~vv~~--ssGN~g~alA~~a~~~G~~~~i~~p~~~~--------~~k~~~~~~~Ga~V~~~~~-~~~~~------~~~a 117 (318)
T 2rkb_A 55 RHLVCS--SGGNAGIAAAYAARKLGIPATIVLPESTS--------LQVVQRLQGEGAEVQLTGK-VWDEA------NLRA 117 (318)
T ss_dssp CEEEEC--CCSHHHHHHHHHHHHHTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-SHHHH------HHHH
T ss_pred CEEEEE--CCchHHHHHHHHHHHcCCCEEEEECCCCc--------HHHHHHHHhcCCEEEEECC-CHHHH------HHHH
Confidence 999986 44999999999999999999999998875 3579999999999999986 46432 2335
Q ss_pred HHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC-CCCeEEEEe
Q 019410 202 EKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFS 280 (341)
Q Consensus 202 ~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~-~~~rVigVe 280 (341)
+++.++. +.++++ ++.|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.+++..+ +++|||||+
T Consensus 118 ~~~~~~~-~~~~~~-~~~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve 190 (318)
T 2rkb_A 118 QELAKRD-GWENVP-PFDHPLIWKGHASLVQELKAVLR-----TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAME 190 (318)
T ss_dssp HHHHHST-TEEECC-SSCSHHHHHHHHHHHHHHHHHSS-----SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEE
T ss_pred HHHHHhc-CCEEeC-CCCChhhccchhHHHHHHHHhcC-----CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEe
Confidence 5565543 344443 34689999999999999999985 369999999999999999999999876 789999999
Q ss_pred eCCCCccchH----------hHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHH
Q 019410 281 VCDDPDYFYD----------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 281 ~~g~~~~~~~----------~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
+.++...... .+..++++++... ..++++.|+|.+++.+++.++.
T Consensus 191 ~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 256 (318)
T 2rkb_A 191 THGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLD 256 (318)
T ss_dssp ETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 9987542211 0112333333211 2356899999999999888765
No 24
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=4.5e-37 Score=297.51 Aligned_cols=232 Identities=16% Similarity=0.175 Sum_probs=182.7
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |++||+| +||+++ +||||+|++.+++.++
T Consensus 33 ~i~~~i~~TPL~~--l~~l~~~~g~~i~~K--------------------------~E~~~p--tGSfKdR~a~~~i~~a 82 (342)
T 2gn0_A 33 RLAGKIYKTGMPR--SNYFSERCKGEIFLK--------------------------FENMQR--TGSFKIRGAFNKLSSL 82 (342)
T ss_dssp HHTTTSCCCCCCB--CHHHHHHHTSEEEEE--------------------------EGGGSG--GGBTHHHHHHHHHHHS
T ss_pred HHhhhcCCCCceE--chhhHHHhCCEEEEE--------------------------EccCCC--cCChHHHHHHHHHHHH
Confidence 5667789999999 777765 8899999 777653 6889999999999988
Q ss_pred H-HcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHH
Q 019410 117 V-AQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVT 195 (341)
Q Consensus 117 ~-~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~ 195 (341)
. +.+.++||++ |+||||+|+|++|+++|++|+||||..++ ..|+++++.+||+|+.++.. |++.
T Consensus 83 ~~~~~~~~vv~~--ssGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~~---- 147 (342)
T 2gn0_A 83 TEAEKRKGVVAC--SAGNHAQGVSLSCAMLGIDGKVVMPKGAP--------KSKVAATCDYSAEVVLHGDN-FNDT---- 147 (342)
T ss_dssp CHHHHHTCEEEE--CSSHHHHHHHHHHHHHTCCEEEEECTTSC--------HHHHHHHHHHSCEEEECCSS-HHHH----
T ss_pred HHhcCCCEEEEE--CCChHHHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH----
Confidence 5 3556789985 57999999999999999999999998874 46899999999999999864 6432
Q ss_pred HHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCe
Q 019410 196 LTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAK 275 (341)
Q Consensus 196 ~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~r 275 (341)
.+.++++.++. +.+++. ++.|+.+..||.+++.||++|+. .+|+||+|+|||||++|++.++|..+|.+|
T Consensus 148 --~~~a~~l~~~~-~~~~~~-~~~n~~~~~g~~t~~~Ei~~q~~------~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~ 217 (342)
T 2gn0_A 148 --IAKVSEIVETE-GRIFIP-PYDDPKVIAGQGTIGLEIMEDLY------DVDNVIVPIGGGGLIAGIAIAIKSINPTIK 217 (342)
T ss_dssp --HHHHHHHHHHH-CCEECC-SSSSHHHHHHHHHHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHHHHHCTTSE
T ss_pred --HHHHHHHHHhc-CCEEeC-CCCCHHHHHHHHHHHHHHHHHcC------CCCEEEEecCCchHHHHHHHHHHHhCCCCe
Confidence 22344444433 244443 23478899999999999999985 499999999999999999999999899999
Q ss_pred EEEEeeCCCCccchH----------hHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHH
Q 019410 276 VHAFSVCDDPDYFYD----------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 276 VigVe~~g~~~~~~~----------~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
||||++.++...... .+..++++++... ..++++.|+|.+++.+++.++.
T Consensus 218 vigve~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 288 (342)
T 2gn0_A 218 VIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQ 288 (342)
T ss_dssp EEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred EEEEEeCCChhHHHHHHcCCccccCCCCccccccCCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 999999987543210 0223445554321 2579999999999999988865
No 25
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=9.9e-37 Score=292.62 Aligned_cols=232 Identities=17% Similarity=0.186 Sum_probs=181.0
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |++||+| |||+++ +||||+|++.+++.++
T Consensus 19 ~i~~~i~~TPL~~--~~~l~~~~g~~i~~K--------------------------~E~~~p--tGS~KdRga~~~i~~~ 68 (323)
T 1v71_A 19 RIKKFANKTPVLT--SSTVNKEFVAEVFFK--------------------------CENFQK--MGAFKFRGALNALSQL 68 (323)
T ss_dssp HHTTTSCCCCEEC--CHHHHHHHTSEEEEE--------------------------EGGGSG--GGBTHHHHHHHHHTTC
T ss_pred HHhccCCCCCceE--hHhhHHHhCCeEEEE--------------------------ecCCCC--cCCHHHHHHHHHHHHH
Confidence 5556679999999 777765 8899999 777754 6889999999998765
Q ss_pred H-HcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHH
Q 019410 117 V-AQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVT 195 (341)
Q Consensus 117 ~-~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~ 195 (341)
. +++.++||++ |+||||+|+|++|+++|++|++|||..++ ..|+++++.|||+|+.++.. +++.
T Consensus 69 ~~~~~~~~vv~~--ssGN~g~alA~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~~---- 133 (323)
T 1v71_A 69 NEAQRKAGVLTF--SSGNHAQAIALSAKILGIPAKIIMPLDAP--------EAKVAATKGYGGQVIMYDRY-KDDR---- 133 (323)
T ss_dssp CHHHHHHCEEEC--CSSHHHHHHHHHHHHTTCCEEEEEETTCC--------HHHHHHHHHTTCEEEEECTT-TTCH----
T ss_pred HHhcCCCeEEEe--CCCcHHHHHHHHHHHcCCCEEEECCCCCc--------HHHHHHHHHcCCEEEEECCC-HHHH----
Confidence 4 2455788885 56999999999999999999999998875 35799999999999999874 5432
Q ss_pred HHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCe
Q 019410 196 LTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAK 275 (341)
Q Consensus 196 ~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~r 275 (341)
.+.++++.++.+ .++++. +.|+....||.+++.||++|+. .+|+||+|+|||||++|++.++|..++++|
T Consensus 134 --~~~a~~l~~~~~-~~~i~~-~~n~~~~~g~~t~~~Ei~~q~~------~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~ 203 (323)
T 1v71_A 134 --EKMAKEISEREG-LTIIPP-YDHPHVLAGQGTAAKELFEEVG------PLDALFVCLGGGGLLSGSALAARHFAPNCE 203 (323)
T ss_dssp --HHHHHHHHHHHT-CBCCCS-SSSHHHHHHHTHHHHHHHHHHC------CCSEEEEECSSSHHHHHHHHHHHHHCTTCE
T ss_pred --HHHHHHHHHhcC-CEecCC-CCCcchhhhHhHHHHHHHHhcC------CCCEEEEecCCcHHHHHHHHHHHHcCCCCE
Confidence 123444444332 344543 5789999999999999999995 589999999999999999999999899999
Q ss_pred EEEEeeCCCCccchH----------hHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHH
Q 019410 276 VHAFSVCDDPDYFYD----------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 276 VigVe~~g~~~~~~~----------~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
||||++.++...... ....++++++... ..++++.|+|.+.+.+++.++.
T Consensus 204 vigve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 274 (323)
T 1v71_A 204 VYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAA 274 (323)
T ss_dssp EEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred EEEEEeCCCchHHHHHHcCCceecCCCCcccccccCCCCcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 999999987643211 0123444444321 2578999999999999888764
No 26
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=2.2e-35 Score=300.75 Aligned_cols=238 Identities=21% Similarity=0.136 Sum_probs=185.1
Q ss_pred ccccCcCCCcccccCCCCCCC--C--ceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--N--TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMA 114 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g--~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~ 114 (341)
.+...+++|||++ +++|++ | ++||+| +|++++ +||||+|++.+++.
T Consensus 53 ~i~~~ig~TPl~~--l~~l~~~~g~~~~i~~K--------------------------~E~~~p--tGS~K~R~a~~~i~ 102 (527)
T 3pc3_A 53 NILEVIGCTPLVK--LNNIPASDGIECEMYAK--------------------------CEFLNP--GGSVKDRIGYRMVQ 102 (527)
T ss_dssp SGGGGSSCCCEEE--CCSHHHHTTCCSEEEEE--------------------------EGGGST--TSBTTHHHHHHHHH
T ss_pred hHHhhcCCCCcEE--cchhhhhcCCCcEEEEE--------------------------eccCCC--CCCHHHHHHHHHHH
Confidence 4566789999999 777755 4 799999 666654 58899999999999
Q ss_pred HHHHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-ccc
Q 019410 115 DAVAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYS 189 (341)
Q Consensus 115 ~A~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~ 189 (341)
+|+++|. ++||+ +|+||||+|+|++|+.+|++|+||||..++ ..|+.++++|||+|+.++.. .|+
T Consensus 103 ~a~~~g~~~~g~~vv~--~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~ 172 (527)
T 3pc3_A 103 DAEEQGLLKPGYTIIE--PTSGNTGIGLAMACAVKGYKCIIVMPEKMS--------NEKVSALRTLGAKIIRTPTEAAYD 172 (527)
T ss_dssp HHHHHTCCCTTCEEEE--ECSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECTTSCTT
T ss_pred HHHHcCCCCCCCEEEE--eCCCHHHHHHHHHHHHhCCeEEEEEcCCCC--------HHHHHHHHHCCCEEEEeCCCCCcc
Confidence 9999997 78887 477999999999999999999999999775 45899999999999999853 354
Q ss_pred ccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchh-HHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHh
Q 019410 190 KIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSW 268 (341)
Q Consensus 190 ~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~-~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k 268 (341)
+.. .. .+.++++.++.+..| ++.++.||. ...||.+++.||++|+. ..+|+||+|+|||||++|++.+++
T Consensus 173 ~~~--~~-~~~a~~~~~~~~~~~-~~~~~~n~~n~~~g~~t~~~Ei~~q~~-----~~~d~vv~~vG~GG~~~G~~~~~k 243 (527)
T 3pc3_A 173 SPE--GL-IYVAQQLQRETPNSI-VLDQYRNAGNPLAHYDGTAAEILWQLD-----NKVDMIVVSAGTAGTISGIGRKIK 243 (527)
T ss_dssp STT--SH-HHHHHHHHHHSSSEE-CCCTTTCTHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHH
T ss_pred cHH--HH-HHHHHHHHHhCCCcE-ecCCCCCcchHHHHHHHHHHHHHHhcC-----CCCCEEEEecCccHHHHHHHHHHH
Confidence 321 12 233555665543444 444556775 35699999999999986 369999999999999999999999
Q ss_pred cCCCCCeEEEEeeCCCCccchHh----------HHHHhhcccCCC----CCCceEEeccchHHHHHHHHHH
Q 019410 269 LGTLKAKVHAFSVCDDPDYFYDY----------TQGLLDGLNAGV----DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 269 ~~~~~~rVigVe~~g~~~~~~~~----------i~~l~~~~~~~~----~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
...|+++||||++.++..+.... ++++..++.+.. ..|+++.|+|.+++.+++.++.
T Consensus 244 ~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p~~~~~~~~d~~~~V~d~e~~~a~r~l~~ 314 (527)
T 3pc3_A 244 EQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNA 314 (527)
T ss_dssp HHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECGGGTHHHHHHHHH
T ss_pred HhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCCCCCCcccchhhCcEEEEECHHHHHHHHHHHHH
Confidence 98999999999999986532211 122222222211 3578999999999999988875
No 27
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=1.2e-36 Score=290.36 Aligned_cols=234 Identities=16% Similarity=0.095 Sum_probs=181.3
Q ss_pred ccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADA 116 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A 116 (341)
++...+++|||++ +++|++ |++||+| |||++ ++||||+|++.+++..+
T Consensus 13 ~i~~~~~~TPL~~--~~~l~~~~g~~i~~K--------------------------~E~~~--ptgSfKdR~a~~~i~~l 62 (311)
T 1ve5_A 13 RIAPYTHRTPLLT--SRLLDGLLGKRLLLK--------------------------AEHLQ--KTGSFKARGALSKALAL 62 (311)
T ss_dssp HHGGGSCCCCEEE--CHHHHHHTTSEEEEE--------------------------EGGGS--GGGBTHHHHHHHHHHHS
T ss_pred HHhccCCCCCcee--chhhHHhhCCeEEEE--------------------------ecCCC--CcCCcHHHHHHHHHHHh
Confidence 5667789999999 676655 7899999 66664 26788999999999887
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHH
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTL 196 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~ 196 (341)
. +.++||++ |+||||+|+|++|+++|++|++|||..++ ..|+++++.+||+|+.++.. |++.
T Consensus 63 ~--~~~~vv~~--ssGN~g~alA~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~~----- 124 (311)
T 1ve5_A 63 E--NPKGLLAV--SSGNHAQGVAYAAQVLGVKALVVMPEDAS--------PYKKACARAYGAEVVDRGVT-AKNR----- 124 (311)
T ss_dssp S--SCCCEEEE--CSSHHHHHHHHHHHHHTCCEEEECCCC----------CCHHHHHHHTTCEEECTTCC-TTTH-----
T ss_pred c--CCCeEEEE--CCCcHHHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH-----
Confidence 6 67789986 47999999999999999999999998875 24799999999999998864 6542
Q ss_pred HHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeE
Q 019410 197 TNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKV 276 (341)
Q Consensus 197 ~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rV 276 (341)
.+.++++.++. +.++++. +.|+.+..||.+++.||++|+.+ .+..+|+||+|+|||||++|++.++|..++++||
T Consensus 125 -~~~a~~~~~~~-~~~~~~~-~~n~~~~~g~~t~~~Ei~~q~~~--~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~v 199 (311)
T 1ve5_A 125 -EEVARALQEET-GYALIHP-FDDPLVIAGQGTAGLELLAQAGR--MGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLV 199 (311)
T ss_dssp -HHHHHHHHHHH-CCEECCS-SSSHHHHHHHHHHHHHHHHHHHH--HTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEE
T ss_pred -HHHHHHHHHhc-CcEecCC-CCCcchhhhccHHHHHHHHHHHh--cCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEE
Confidence 12334444433 2444432 34899999999999999999952 1236999999999999999999999998899999
Q ss_pred EEEeeCCCCccchH-----------hHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHH
Q 019410 277 HAFSVCDDPDYFYD-----------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 277 igVe~~g~~~~~~~-----------~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
|||++.++...... .+.++.+++.... ..++++.|+|.+++.+++.++.
T Consensus 200 igve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 270 (311)
T 1ve5_A 200 LGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGERTFPILRERVDGILTVSEEALLEAERLLFT 270 (311)
T ss_dssp EEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCCSSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCCCCCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHH
Confidence 99999986532110 1345566655321 2578999999999999988864
No 28
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=3.5e-35 Score=289.74 Aligned_cols=233 Identities=15% Similarity=0.149 Sum_probs=178.8
Q ss_pred cCCCcccccCCCCCCC--C-ceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHH--
Q 019410 44 HFPTPIHKWNLPNLPH--N-TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVA-- 118 (341)
Q Consensus 44 ~~~TPl~~~~l~~L~~--g-~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~-- 118 (341)
..+|||++ +++|++ | .+||+| |||++. ++||||+|++.+++.++++
T Consensus 42 ~~~TPL~~--~~~l~~~~g~~~i~~K--------------------------~E~~~~-ptgSfK~Rga~~~i~~~~~~~ 92 (398)
T 4d9i_A 42 YRPTPLCA--LDDLANLFGVKKILVK--------------------------DESKRF-GLNAFXMLGGAYAIAQLLCEK 92 (398)
T ss_dssp CCCCCEEE--CHHHHHHHTSSEEEEE--------------------------EGGGST-TTTBSTHHHHHHHHHHHHHHH
T ss_pred CCCCCcee--hHHHHHHhCCCcEEEE--------------------------ECCCCC-CCCcchhhhhHHHHHHHHHHh
Confidence 37999999 777766 7 599999 888863 3799999999999998842
Q ss_pred ----------------cCCC-eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 119 ----------------QGAD-CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 119 ----------------~g~~-~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
.+.+ +||+ +|+||||+|+|++|+++|++|+||||..++ ..|+..++.+||+|+
T Consensus 93 ~G~~~~~l~~e~l~~~~~~~~~vv~--aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~Vv 162 (398)
T 4d9i_A 93 YHLDIETLSFEHLKNAIGEKMTFAT--TTDGNHGRGVAWAAQQLGQNAVIYMPKGSA--------QERVDAILNLGAECI 162 (398)
T ss_dssp HTCCGGGCCHHHHHHCCSCCCEEEE--ECSSHHHHHHHHHHHHHTCEEEEEECTTCC--------HHHHHHHHTTTCEEE
T ss_pred hcccccccchhhhhhhccCCCEEEE--ECCCHHHHHHHHHHHHcCCCEEEEEeCCCC--------HHHHHHHHHcCCEEE
Confidence 3456 8887 577999999999999999999999998875 458999999999999
Q ss_pred EECCccccccCcHHHHHHHHHHHHHhCCCcEEeCC----CCC--chhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCC
Q 019410 182 LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPV----GGS--NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 255 (341)
Q Consensus 182 ~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~----g~~--n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vG 255 (341)
.++. .|+++ .+ .++++.++. +.++++. ++. ++....||.+++.||++|+.+ .+..+|+||+|+|
T Consensus 163 ~v~~-~~~~a-----~~-~a~~~~~~~-g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~--~g~~~d~vvvpvG 232 (398)
T 4d9i_A 163 VTDM-NYDDT-----VR-LTMQHAQQH-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMRE--MGVTPTHVLLQAG 232 (398)
T ss_dssp ECSS-CHHHH-----HH-HHHHHHHHH-TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHH--TTCCCSEEEEECS
T ss_pred EECC-CHHHH-----HH-HHHHHHHHc-CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhh--cCCCCCEEEEecC
Confidence 9987 46542 22 334444433 3577764 343 266789999999999999974 1235999999999
Q ss_pred chhHHHHHHHHHhcC--CCCCeEEEEeeCCCCccch-----------HhHHHHhhcccCCC-----------CCCceEEe
Q 019410 256 SGGTIAGLSLGSWLG--TLKAKVHAFSVCDDPDYFY-----------DYTQGLLDGLNAGV-----------DSRDIVNI 311 (341)
Q Consensus 256 tGGt~aGl~~~~k~~--~~~~rVigVe~~g~~~~~~-----------~~i~~l~~~~~~~~-----------~~~~iv~v 311 (341)
+|||++|++.+++.. .+.++||||++.++..... ..+.++.+++.... ..++++.|
T Consensus 233 ~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V 312 (398)
T 4d9i_A 233 VGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISC 312 (398)
T ss_dssp SSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHHHHHHHTSCCCC------CCTTCCCSSCCHHHHHHHHHHCCEEEEE
T ss_pred ccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEE
Confidence 999999999999754 4789999999998764321 13456666664321 25789999
Q ss_pred ccchHHHHHHHHHH
Q 019410 312 QNVSVYMTFKNILM 325 (341)
Q Consensus 312 ~d~~~~~~~~~~~~ 325 (341)
+|.+++.+++.++.
T Consensus 313 ~d~e~~~a~~~l~~ 326 (398)
T 4d9i_A 313 QDSVAALGMRVLGN 326 (398)
T ss_dssp CTHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHH
Confidence 99999988887763
No 29
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=3.5e-35 Score=292.73 Aligned_cols=238 Identities=17% Similarity=0.121 Sum_probs=178.8
Q ss_pred ccccCcCCCcccccCCCCCCC--C--ceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH--N--TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMA 114 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~--g--~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~ 114 (341)
++...+++|||++ +++|++ | ++||+| +||+++ +||||+|++.+++.
T Consensus 101 ~i~~~ig~TPLv~--l~~Ls~~~G~~~~v~lK--------------------------~E~~np--tGSfKdR~a~~~i~ 150 (435)
T 1jbq_A 101 DILKKIGDTPMVR--INKIGKKFGLKCELLAK--------------------------CEFFNA--GGSVKDRISLRMIE 150 (435)
T ss_dssp SGGGGSSCCCEEE--CCSHHHHTTCCSEEEEE--------------------------EGGGST--TSBTHHHHHHHHHH
T ss_pred HHHhhCCCCCeEE--CcchhhHhCCCceEEEE--------------------------ECCCCC--cCCHHHHHHHHHHH
Confidence 4567889999999 777765 5 699999 666542 57789999999999
Q ss_pred HHHHcCC----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc-ccc
Q 019410 115 DAVAQGA----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYS 189 (341)
Q Consensus 115 ~A~~~g~----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~-~~~ 189 (341)
+|+++|. ++||++ |+||||+|+|++|+++|++|+||||..++ ..|++++++|||+|+.++.. .|+
T Consensus 151 ~a~~~G~l~~g~tVV~a--SsGN~G~AlA~aaa~~Gi~~~IvmP~~~s--------~~k~~~l~~~GAeVv~v~~~~~~d 220 (435)
T 1jbq_A 151 DAERDGTLKPGDTIIEP--TSGNTGIGLALAAAVRGYRCIIVMPEKMS--------SEKVDVLRALGAEIVRTPTNARFD 220 (435)
T ss_dssp HHHHHTCSCTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEECSCCC--------HHHHHHHHHTTCEEEECCC-----
T ss_pred HHHHcCCCCCCCEEEEe--CCCHHHHHHHHHHHHcCCeEEEEeCCCCC--------HHHHHHHHhCCCEEEEecCCCCcc
Confidence 9998885 678874 56999999999999999999999998875 45899999999999999853 354
Q ss_pred ccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhH-HHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHh
Q 019410 190 KIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSW 268 (341)
Q Consensus 190 ~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~-~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k 268 (341)
+.. .. .+.+++++++.++.|+++ ++.|+.+ ..||.+++.||++|+. ..+|+||+|+|||||++|++.++|
T Consensus 221 ~~~--~~-~~~a~~la~~~~~~~~i~-q~~n~~n~~ag~~t~a~EI~eQl~-----~~~D~vVvpvGtGGtlaGi~~~lk 291 (435)
T 1jbq_A 221 SPE--SH-VGVAWRLKNEIPNSHILD-QYRNASNPLAHYDTTADEILQQCD-----GKLDMLVASVGTGGTITGIARKLK 291 (435)
T ss_dssp --C--CH-HHHHHHHHHHSTTEECCC-TTTCTHHHHHHHHTHHHHHHHHHT-----TCCCEEEEECSSSHHHHHHHHHHH
T ss_pred hHH--HH-HHHHHHHHHhcCCeEEeC-ccCCcccHHHHHHHHHHHHHHHcC-----CCCCEEEEecCCcHhHHHHHHHHH
Confidence 321 11 233555665544556654 3445543 3578999999999995 368999999999999999999999
Q ss_pred cCCCCCeEEEEeeCCCCccchHhHH------HHhhcccC----C----CCCCceEEeccchHHHHHHHHHH
Q 019410 269 LGTLKAKVHAFSVCDDPDYFYDYTQ------GLLDGLNA----G----VDSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 269 ~~~~~~rVigVe~~g~~~~~~~~i~------~l~~~~~~----~----~~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
...|++|||||++.++..+...... .+.++++. . ...|+++.|+|.+++.+++.++.
T Consensus 292 ~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~~l~~~~vd~~~~Vsd~ea~~a~r~La~ 362 (435)
T 1jbq_A 292 EKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIA 362 (435)
T ss_dssp HHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccchhhhhhhccceEEeCHHHHHHHHHHHHH
Confidence 9899999999999988543211110 11222222 1 13578999999999999888764
No 30
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=2.3e-35 Score=298.68 Aligned_cols=240 Identities=18% Similarity=0.189 Sum_probs=185.3
Q ss_pred hcCCCCCcccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHH
Q 019410 31 HLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRK 108 (341)
Q Consensus 31 ~~~~~~~~~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rk 108 (341)
.|..+...++...+++|||++ +++|++ |++||+| |||++ ++||||+|+
T Consensus 16 ~~~~i~~a~i~~~i~~TPL~~--l~~Ls~~~g~~V~lK--------------------------~E~lq--PtgSfKdRg 65 (514)
T 1tdj_A 16 YLRAVLRAPVYEAAQVTPLQK--MEKLSSRLDNVILVK--------------------------REDRQ--PVHSFKLRG 65 (514)
T ss_dssp HHHHHHHCCGGGTCCCCCEEE--CHHHHHHTTSEEEEE--------------------------CGGGS--TTSSSTHHH
T ss_pred hHHHHHHHhHhcccCCCCcEE--chhhHHhhCCeEEEE--------------------------ECCCC--CcccHHHHH
Confidence 344443346777788999999 677765 8899999 88885 378999999
Q ss_pred HHHHHHHHHHc-CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCcc
Q 019410 109 LEFLMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEE 187 (341)
Q Consensus 109 l~~ll~~A~~~-g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~ 187 (341)
+.+++..+.++ +.++||++ |+||||+|+|++|+++|++|+||||..+| ..|+++++.+||+|++++. .
T Consensus 66 A~n~i~~l~~~~~~~gVV~a--SsGNhg~avA~aa~~lGi~~~IvmP~~~p--------~~Kv~~~r~~GAeVvlv~~-~ 134 (514)
T 1tdj_A 66 AYAMMAGLTEEQKAHGVITA--SAGNHAQGVAFSSARLGVKALIVMPTATA--------DIKVDAVRGFGGEVLLHGA-N 134 (514)
T ss_dssp HHHHHHTTTTSSCSSSCEEE--ECSSSHHHHHHHHHHTTCCEEEECCSSCC--------HHHHHHHHHHSCEEECCCS-S
T ss_pred HHHHHHHHHHhcCCCEEEEE--CCcHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECC-C
Confidence 99999887543 45678875 45999999999999999999999998875 3579999999999999986 4
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHH
Q 019410 188 YSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGS 267 (341)
Q Consensus 188 ~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~ 267 (341)
|+++ .+.++++.++. ..++++. +.|+..+.|+.|++.||++|+. .+|+||+|+|||||++|++.++
T Consensus 135 ~dda------~~~a~ela~e~-g~~~v~p-fdnp~~iaGqgTig~EI~eQl~------~~D~vvvpvGgGGliaGia~~l 200 (514)
T 1tdj_A 135 FDEA------KAKAIELSQQQ-GFTWVPP-FDHPMVIAGQGTLALELLQQDA------HLDRVFVPVGGGGLAAGVAVLI 200 (514)
T ss_dssp HHHH------HHHHHHHHHHH-CCEECCS-SCCHHHHHHHHHHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHH
T ss_pred HHHH------HHHHHHHHHhc-CCEeeCC-CCCHHHHHHHHHHHHHHHHHCC------CCCEEEEccCcHHHHHHHHHHH
Confidence 6542 22344454432 2444432 3478888999999999999985 3999999999999999999999
Q ss_pred hcCCCCCeEEEEeeCCCCccch----------HhHHHHhhcccCC-----------CCCCceEEeccchHHHHHHHHHH
Q 019410 268 WLGTLKAKVHAFSVCDDPDYFY----------DYTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 268 k~~~~~~rVigVe~~g~~~~~~----------~~i~~l~~~~~~~-----------~~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
|..+|++|||||++.+++.... ..+..++++++.. -..|+++.|+|.+++.+++.++.
T Consensus 201 k~~~P~~kVIgVep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~ 279 (514)
T 1tdj_A 201 KQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFE 279 (514)
T ss_dssp HHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHHHTTSCCEEEEECHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEeccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 9999999999999998754321 1122334444321 13679999999999999998753
No 31
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=2e-34 Score=288.02 Aligned_cols=243 Identities=15% Similarity=0.155 Sum_probs=180.7
Q ss_pred CCcccccCcCCCcccccCCCCCC----C------CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchH
Q 019410 36 PSHVFSLGHFPTPIHKWNLPNLP----H------NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNK 105 (341)
Q Consensus 36 ~~~~~~~~~~~TPl~~~~l~~L~----~------g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK 105 (341)
|.+..++++++|||++ +++|+ + |.+||+| +|++++ .+||||
T Consensus 68 ~~~~~~~g~~~TPL~~--~~~l~~~l~~~~g~~~~~~v~lK--------------------------~E~~~p-~tGSfK 118 (442)
T 3ss7_X 68 PETAATGGIIESELVA--IPAMQKRLEKEYQQPISGQLLLK--------------------------KDSHLP-ISGSIK 118 (442)
T ss_dssp GGGGGGTTCCCCCEEE--CHHHHHHHHHHHTCCCCSEEEEE--------------------------EGGGCT-TTSBTH
T ss_pred hhhhccCCCCCCCcEE--hHhhhhHHHHhhCCCcCCeEEEe--------------------------ecCCCC-CCCCcH
Confidence 3345567889999999 66654 3 4799999 555531 258889
Q ss_pred hHHHHHHHHH-----HHHcCC---------------------CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC
Q 019410 106 VRKLEFLMAD-----AVAQGA---------------------DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL 159 (341)
Q Consensus 106 ~Rkl~~ll~~-----A~~~g~---------------------~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~ 159 (341)
+|++.+++.. |+++|. .+||+ +|+||||+|+|++|+++|++|+||||.+++
T Consensus 119 ~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~--aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~- 195 (442)
T 3ss7_X 119 ARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAV--GSTGNLGLSIGIMSARIGFKVTVHMSADAR- 195 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEE--ECSSHHHHHHHHHHHHHTCEEEEEEETTSC-
T ss_pred HHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEE--ECCCHHHHHHHHHHHHhCCcEEEEECCCCC-
Confidence 9999998875 777775 36776 467999999999999999999999998875
Q ss_pred cCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHh
Q 019410 160 VDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQ 239 (341)
Q Consensus 160 ~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~ 239 (341)
..|+..++.|||+|+.++. .|+++ . +.++++.++.+..|+++. ..++....||.+++.||.+|+.
T Consensus 196 -------~~k~~~~r~~GA~Vv~v~~-~~~~a-----~-~~a~~~a~~~~~~~~i~~-~n~~~~~~G~~t~g~Ei~eQl~ 260 (442)
T 3ss7_X 196 -------AWKKAKLRSHGVTVVEYEQ-DYGVA-----V-EEGRKAAQSDPNCFFIDD-ENSRTLFLGYSVAGQRLKAQFA 260 (442)
T ss_dssp -------HHHHHHHHHTTCEEEEESS-CHHHH-----H-HHHHHHHHTCTTEEECCT-TTCHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHCCCEEEEECC-CHHHH-----H-HHHHHHHHhCCCceeCCC-CChHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999986 46432 2 234555555445677764 2234467899999999999996
Q ss_pred cCC---CCCCCCEEEEcCCchhHHHHHHHHHhcC-CCCCeEEEEeeCCCCccchH---------hHH-------HHhhcc
Q 019410 240 TGT---GGVKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDPDYFYD---------YTQ-------GLLDGL 299 (341)
Q Consensus 240 ~~~---~g~~~D~Ivv~vGtGGt~aGl~~~~k~~-~~~~rVigVe~~g~~~~~~~---------~i~-------~l~~~~ 299 (341)
+.+ .+..||+||+|+|+||+++|++.++|.. +++++||||++.+++..... .++ .+++++
T Consensus 261 ~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl 340 (442)
T 3ss7_X 261 QQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGL 340 (442)
T ss_dssp HHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCCHHHHHHHHSCGGGCBGGGGTCCCCCSCGGG
T ss_pred hhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCchHHHHHHhcCCCceeeeccCCCchhhHHhhc
Confidence 310 0124669999999999999999999986 89999999999998753211 021 122232
Q ss_pred cCC-----------CCCCceEEeccchHHHHHHHHHH
Q 019410 300 NAG-----------VDSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 300 ~~~-----------~~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
... -..++++.|+|.+++.+++.++.
T Consensus 341 ~v~~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~ 377 (442)
T 3ss7_X 341 AVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQ 377 (442)
T ss_dssp CCSBCCSSHHHHHGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCCCchhHHHHHHhhCCeEEEECHHHHHHHHHHHHH
Confidence 221 13578999999999999988875
No 32
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=2.1e-35 Score=288.38 Aligned_cols=238 Identities=18% Similarity=0.193 Sum_probs=182.1
Q ss_pred CCCCCcccccCcCCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHH
Q 019410 33 APIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLE 110 (341)
Q Consensus 33 ~~~~~~~~~~~~~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~ 110 (341)
..++..++...+++|||++ +++|++ |++||+| |||+++ +||||+|.+.
T Consensus 47 ~~i~~~~i~~~i~~TPL~~--l~~l~~~~g~~i~~K--------------------------~E~~~p--tgSfKdRga~ 96 (366)
T 3iau_A 47 VDILASPVYDVAIESPLEL--AEKLSDRLGVNFYIK--------------------------REDKQR--VFSFKLRGAY 96 (366)
T ss_dssp HHHHHCCGGGTCCCCCEEE--CHHHHHHHTSEEEEE--------------------------EGGGST--TSBTTHHHHH
T ss_pred HHHHHHHHhhhcCCCCcEE--hhhhhHhhCCEEEEE--------------------------ecCCCC--CcchHHHHHH
Confidence 3444457778889999999 777766 8899999 777753 6889999999
Q ss_pred HHHHHHHH-cCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCcccc
Q 019410 111 FLMADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYS 189 (341)
Q Consensus 111 ~ll~~A~~-~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~ 189 (341)
+++..+.+ .+.++||+++ +||||+|+|++|+++|++|++|||..++ ..++..++.+||+|+.++. .|+
T Consensus 97 ~~i~~l~~~~~~~~vv~as--sGN~g~a~A~aa~~~G~~~~iv~P~~~~--------~~k~~~~~~~GA~V~~v~~-~~~ 165 (366)
T 3iau_A 97 NMMSNLSREELDKGVITAS--AGNHAQGVALAGQRLNCVAKIVMPTTTP--------QIKIDAVRALGGDVVLYGK-TFD 165 (366)
T ss_dssp HHHHTSCHHHHHHCEEEEC--SSHHHHHHHHHHHHTTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-SHH
T ss_pred HHHHHHHHhCCCCEEEEeC--CCHHHHHHHHHHHHhCCceEEEeCCCCC--------HHHHHHHHHCCCeEEEECc-CHH
Confidence 98877532 3346788864 4999999999999999999999998765 3579999999999999985 465
Q ss_pred ccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhc
Q 019410 190 KIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWL 269 (341)
Q Consensus 190 ~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~ 269 (341)
++ . +.++++.++. +.++++ ++.|+....||.+++.||++|+. .+|+||+|+|+|||++|++.++|.
T Consensus 166 ~~-----~-~~a~~~~~~~-~~~~i~-~~~n~~~i~g~~t~~~Ei~~q~~------~~d~vvvpvG~GG~~~Gi~~~~k~ 231 (366)
T 3iau_A 166 EA-----Q-THALELSEKD-GLKYIP-PFDDPGVIKGQGTIGTEINRQLK------DIHAVFIPVGGGGLIAGVATFFKQ 231 (366)
T ss_dssp HH-----H-HHHHHHHHHH-TCEECC-SSSSHHHHHHHHHHHHHHHHHCC------SEEEEEEECSSSHHHHHHHHHHHH
T ss_pred HH-----H-HHHHHHHHhc-CCEecC-CCCChHHHHHHHHHHHHHHHhcC------CCCEEEEccCchHHHHHHHHHHHH
Confidence 42 2 2334444432 244443 34578888999999999999983 699999999999999999999999
Q ss_pred CCCCCeEEEEeeCCCCccch----------HhHHHHhhcccCCC-----------CCCceEEeccchHHHHHHHHHH
Q 019410 270 GTLKAKVHAFSVCDDPDYFY----------DYTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 270 ~~~~~rVigVe~~g~~~~~~----------~~i~~l~~~~~~~~-----------~~~~iv~v~d~~~~~~~~~~~~ 325 (341)
.+++++|+||++.++..... ..+..+++++.... ..++++.|+|.+.+.+++.++.
T Consensus 232 ~~~~~~vigVe~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 308 (366)
T 3iau_A 232 IAPNTKIIGVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYD 308 (366)
T ss_dssp HSTTSEEEEEEEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred hCCCCeEEEEeecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHHHHHhcCCCceeECHHHHHHHHHHHHH
Confidence 99999999999998754221 11122344443211 2568999999999999887764
No 33
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=2.9e-33 Score=275.36 Aligned_cols=230 Identities=14% Similarity=0.052 Sum_probs=170.5
Q ss_pred CCCcccccCCCCCCC-CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHH---HHHcC
Q 019410 45 FPTPIHKWNLPNLPH-NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMAD---AVAQG 120 (341)
Q Consensus 45 ~~TPl~~~~l~~L~~-g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~---A~~~g 120 (341)
.+|||++ +++|++ |++||+| |||+++. +||||+|++.+++.. +++.|
T Consensus 95 ~~TPL~~--l~~Ls~~g~~IylK--------------------------~E~lnp~-tGS~K~R~a~~~i~~l~~a~~~g 145 (389)
T 1wkv_A 95 KPTPLVR--SRLQLPNGVRVWLK--------------------------LEWYNPF-SLSVKDRPAVEIISRLSRRVEKG 145 (389)
T ss_dssp CSCCEEE--CCCCCSTTEEEEEE--------------------------EGGGSTT-TSBTTHHHHHHHHHHHTTTSCTT
T ss_pred CCCCeEE--ccccccCCCeEEEE--------------------------EcCCCCC-cCChHHHHHHHHHHHHHHHHhcC
Confidence 6899999 788877 8899999 8888632 688999999999998 55566
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE-EECCccccccCcHHHHHH
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE-LISKEEYSKIGSVTLTNI 199 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~-~v~~~~~~~~~~~~~~~~ 199 (341)
++||+ +|+||||+|+|++|+++|++|+||||..++ ..|+.+++++||+|+ .++.+.++++ ++.
T Consensus 146 -~~Iv~--assGNhG~AlA~aaa~~Gl~~~ivmp~~~~--------~~k~~~~~~~GAeVv~~v~~~~~~da-----~~~ 209 (389)
T 1wkv_A 146 -SLVAD--ATSSNFGVALSAVARLYGYRARVYLPGAAE--------EFGKLLPRLLGAQVIVDPEAPSTVHL-----LPR 209 (389)
T ss_dssp -CEEEE--ECCHHHHHHHHHHHHHTTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEETTCSSSGGG-----HHH
T ss_pred -CEEEE--ECCcHHHHHHHHHHHHcCCeEEEEECCCCC--------HHHHHHHHHcCCEEEEEcCCCCHHHH-----HHH
Confidence 67774 567999999999999999999999998764 347889999999999 7774456543 122
Q ss_pred HHHHHHHhCCCcEEeCCCCCchhH-HHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEE
Q 019410 200 LKEKLLKEGRRPYVIPVGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHA 278 (341)
Q Consensus 200 ~a~~l~~~g~~~~~ip~g~~n~~~-~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVig 278 (341)
+.++.++. +.+++ .++.|+.. ..||.+++.||.+|+.+ .+..||+||+|+|||||++|++.+++..++++||||
T Consensus 210 -a~~~~~~~-g~~~~-~p~~N~~~~~~~~~t~g~Ei~~Q~~~--~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvig 284 (389)
T 1wkv_A 210 -VMKDSKNE-GFVHV-NQFYNDANFEAHMRGTAREIFVQSRR--GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVL 284 (389)
T ss_dssp -HHHHHHHH-CCEEC-CTTTCHHHHHHHHHTHHHHHHHHHHH--TTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred -HHHHHHcc-CcEec-CcCCChHHHHHHHHHHHHHHHHHHHh--cCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEE
Confidence 22333321 23433 23335654 45788999999999974 234699999999999999999999998889999999
Q ss_pred EeeCCCCcc-chHhHHHHhhcccCCCCCC-ceEEeccchHHHHHHHHHH
Q 019410 279 FSVCDDPDY-FYDYTQGLLDGLNAGVDSR-DIVNIQNVSVYMTFKNILM 325 (341)
Q Consensus 279 Ve~~g~~~~-~~~~i~~l~~~~~~~~~~~-~iv~v~d~~~~~~~~~~~~ 325 (341)
|++.+.... ..+.+.. ...+......| +++.|+|.+++.+++.++.
T Consensus 285 Ve~~~~~~l~Gi~~i~~-~~~~~~~~~~dg~~~~Vsd~ea~~a~~~l~~ 332 (389)
T 1wkv_A 285 VQPAQGDSIPGIRRVET-GMLWINMLDISYTLAEVTLEEAMEAVVEVAR 332 (389)
T ss_dssp EEECTTCCCTTCCCGGG-CCSHHHHSCCCCEEEEECHHHHHHHHHHHHH
T ss_pred EecCCCCccccccccCC-cchhhhhheeccEEEEECHHHHHHHHHHHHH
Confidence 999875421 1111100 00000012356 8999999999999888764
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-33 Score=277.39 Aligned_cols=239 Identities=18% Similarity=0.150 Sum_probs=171.4
Q ss_pred CCCcccccCCCCCCC---CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHHcCC
Q 019410 45 FPTPIHKWNLPNLPH---NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVAQGA 121 (341)
Q Consensus 45 ~~TPl~~~~l~~L~~---g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~~g~ 121 (341)
.+|||++ +++|++ |++||+| |||+++ +||||+|++.+++..+.+.|.
T Consensus 76 ~~TPL~~--~~~Ls~~~gg~~i~lK--------------------------~E~l~p--tGSfK~R~a~~~i~~a~~~g~ 125 (418)
T 1x1q_A 76 RPTPLYH--AKRLSEYWGGAQVFLK--------------------------REDLLH--TGAHKINNTLGQALLARRMGK 125 (418)
T ss_dssp CSCCEEE--CHHHHHHHTSSEEEEE--------------------------EGGGSG--GGBTTHHHHHHHHHHHHHHTC
T ss_pred CCCCcEE--hHHhHhhcCCceEEEE--------------------------EccCCc--CccHHHHHHHHHHHHHHHcCC
Confidence 5799999 777765 5899999 888875 788999999999888888888
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC--ccccccCcHHHHHH
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK--EEYSKIGSVTLTNI 199 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~--~~~~~~~~~~~~~~ 199 (341)
+.+|+. +++||||+|+|++|+++|++|+||||...+. . ...|+..++.|||+|+.++. +.|++ ..+.
T Consensus 126 ~~vI~~-~ssGNhg~avA~aaa~~Gi~~~I~mp~~~~~-~----~~~kv~~~~~~GA~Vv~v~~~~~~~~~-----a~~~ 194 (418)
T 1x1q_A 126 RRVIAE-TGAGQHGVSVATVAALFGLECVVYMGEEDVR-R----QALNVFRMKLLGAEVRPVAAGSRTLKD-----ATNE 194 (418)
T ss_dssp CEEEEE-CSSSHHHHHHHHHHHHHTCEEEEEEEHHHHH-T----CHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHH
T ss_pred CEEEEe-cCchHHHHHHHHHHHHcCCCEEEEECCCcch-h----hhHHHHHHHHCCCEEEEECCCCCCHHH-----HHHH
Confidence 877764 3459999999999999999999999975211 0 13578999999999999984 23433 2233
Q ss_pred HHHHHHHhCCCcEEeCCCCC--chh--HH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcC-CCC
Q 019410 200 LKEKLLKEGRRPYVIPVGGS--NSI--GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG-TLK 273 (341)
Q Consensus 200 ~a~~l~~~g~~~~~ip~g~~--n~~--~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~-~~~ 273 (341)
..+.+.++.++.+++..++. +|. .+ .||.+++.||.+|+.+. .+..+|+||+|+|+||+++|++.++|.. +++
T Consensus 195 a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~~~Ei~~Ql~~~-~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~ 273 (418)
T 1x1q_A 195 AIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLEL-FGRLPDALIAAVGGGSNAIGLFAPFAYLPEGR 273 (418)
T ss_dssp HHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHH-HSSCCSEEEEECSSSSHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHhh-cCCCCCEEEEecCCcHhHHHHHHHHHHhCCCC
Confidence 33334444224455544433 333 22 48999999999999521 0235899999999999999999999876 899
Q ss_pred CeEEEEeeCCCCccc---hH--------------------------hHHHHhhcccCC-C----------CCCceEEecc
Q 019410 274 AKVHAFSVCDDPDYF---YD--------------------------YTQGLLDGLNAG-V----------DSRDIVNIQN 313 (341)
Q Consensus 274 ~rVigVe~~g~~~~~---~~--------------------------~i~~l~~~~~~~-~----------~~~~iv~v~d 313 (341)
+|||||++.++..+. .. ....+.+++... + ..++++.|+|
T Consensus 274 ~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd 353 (418)
T 1x1q_A 274 PKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTD 353 (418)
T ss_dssp CEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEEEEBCCC----------------CSBCCHHHHHHHHHTSEEEEEECH
T ss_pred CeEEEEecCCcccccHHHHHHHHcCCeeeeccccccccccccccccCCceeeeccCCCCCCHHHHHHHhccCeEEEEECH
Confidence 999999999874221 01 012233333211 1 2468999999
Q ss_pred chHHHHHHHHHH
Q 019410 314 VSVYMTFKNILM 325 (341)
Q Consensus 314 ~~~~~~~~~~~~ 325 (341)
.+++.+++.++.
T Consensus 354 ~e~~~a~~~l~~ 365 (418)
T 1x1q_A 354 EEALEGFKLLAR 365 (418)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988864
No 35
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.4e-32 Score=269.67 Aligned_cols=238 Identities=17% Similarity=0.117 Sum_probs=171.9
Q ss_pred CCCcccccCCCCCCC--C-ceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHHcCC
Q 019410 45 FPTPIHKWNLPNLPH--N-TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVAQGA 121 (341)
Q Consensus 45 ~~TPl~~~~l~~L~~--g-~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~~g~ 121 (341)
.+|||++ +++|++ | ++||+| |||+++ +||||+|++.+++..|+++|.
T Consensus 49 ~~TPL~~--~~~l~~~~g~~~i~~K--------------------------~E~~~p--tGSfK~R~a~~~i~~a~~~g~ 98 (388)
T 1v8z_A 49 RPTPLYY--AKRLTEKIGGAKIYLK--------------------------REDLVH--GGAHKTNNAIGQALLAKFMGK 98 (388)
T ss_dssp CSCCEEE--CHHHHHHHTSSEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHHHHTTC
T ss_pred CCCCcee--hHhhHhhcCCceEEEE--------------------------eccCCC--CCCHHHHHHHHHHHHHHHcCC
Confidence 4699999 777765 4 899999 777753 788999999999999888898
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc--cccccCcHHHHHH
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNI 199 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~--~~~~~~~~~~~~~ 199 (341)
+++|+. +|+||||+|+|++|+++|++|+||||..... . .+.|+.+++.+||+|+.++.. .|++ ..+.
T Consensus 99 ~~vv~~-~ssGN~g~a~A~aa~~~G~~~~iv~p~~~~~-~----~~~~~~~~~~~GA~V~~~~~~~~~~~~-----a~~~ 167 (388)
T 1v8z_A 99 TRLIAE-TGAGQHGVATAMAGALLGMKVDIYMGAEDVE-R----QKMNVFRMKLLGANVIPVNSGSRTLKD-----AINE 167 (388)
T ss_dssp CEEEEE-ESSSHHHHHHHHHHHHTTCEEEEEEEHHHHT-T----CHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHH
T ss_pred CEEEEe-cCchHHHHHHHHHHHHcCCcEEEEEcCCchh-h----hhhHHHHHHHCCCEEEEECCCCCCHHH-----HHHH
Confidence 888863 3459999999999999999999999974210 1 135789999999999999852 3432 2222
Q ss_pred HHHHHHHhCCCcEEeCCCCCch--h--HH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCC
Q 019410 200 LKEKLLKEGRRPYVIPVGGSNS--I--GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKA 274 (341)
Q Consensus 200 ~a~~l~~~g~~~~~ip~g~~n~--~--~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~ 274 (341)
..+.+.++.++.++++.++.|+ . .+ .||.+++.||++|+.+. .+..+|+||+|+|||||++|++.+++ .++.+
T Consensus 168 a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~~Ei~~q~~~~-~~~~~d~vvvpvG~GG~~aGi~~~~~-~~~~~ 245 (388)
T 1v8z_A 168 ALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEA-EGQLPDVIVACVGGGSNAMGIFYPFV-NDKKV 245 (388)
T ss_dssp HHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHH-HSSCCSEEEEECSSSHHHHHHHGGGT-TCTTS
T ss_pred HHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHHHHHHHHHHHh-cCCCCCEEEEecCccHhHHHHHHHHh-hCCCc
Confidence 2233344333456676665443 2 22 38899999999999420 02358999999999999999999888 47999
Q ss_pred eEEEEeeCCCCccc---hHh--------------------------HHHHhhcccC-----------CCCCCceEEeccc
Q 019410 275 KVHAFSVCDDPDYF---YDY--------------------------TQGLLDGLNA-----------GVDSRDIVNIQNV 314 (341)
Q Consensus 275 rVigVe~~g~~~~~---~~~--------------------------i~~l~~~~~~-----------~~~~~~iv~v~d~ 314 (341)
|||||++.++..+. .+. ...+.+++.. ....++++.|+|.
T Consensus 246 ~vigve~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~~~~~~~V~d~ 325 (388)
T 1v8z_A 246 KLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDE 325 (388)
T ss_dssp EEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEEEEEHH
T ss_pred eEEEEccCccccchhhhhHHHhcCCceeccccccccccccccccCCCceeeeccccCCCChhHHHHHhcCCcEEEEECHH
Confidence 99999999864311 010 1112222211 0124689999999
Q ss_pred hHHHHHHHHHH
Q 019410 315 SVYMTFKNILM 325 (341)
Q Consensus 315 ~~~~~~~~~~~ 325 (341)
+++.+++.++.
T Consensus 326 e~~~a~~~l~~ 336 (388)
T 1v8z_A 326 EALKAFHELSR 336 (388)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988875
No 36
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.98 E-value=5.3e-32 Score=266.70 Aligned_cols=237 Identities=18% Similarity=0.136 Sum_probs=172.2
Q ss_pred CCCcccccCCCCCCC--CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHHcCCC
Q 019410 45 FPTPIHKWNLPNLPH--NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVAQGAD 122 (341)
Q Consensus 45 ~~TPl~~~~l~~L~~--g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~~g~~ 122 (341)
.+|||++ +++|++ |++||+| |||+++ +||||+|++.+++..|+++|.+
T Consensus 54 ~~TPL~~--~~~l~~~~g~~i~lK--------------------------~E~l~p--tGSfK~R~a~~~~~~a~~~g~~ 103 (396)
T 1qop_B 54 RPTALTK--CQNITAGTRTTLYLK--------------------------REDLLH--GGAHKTNQVLGQALLAKRMGKS 103 (396)
T ss_dssp CSCCEEE--CHHHHTTSSEEEEEE--------------------------EGGGST--TSBTHHHHHHHHHHHHHHTTCC
T ss_pred CCCCcEE--hhhhhhccCCeEEEE--------------------------eccCCC--CCcHHHHHHHHHHHHHHHcCcC
Confidence 4699999 677765 7899999 888764 7899999999999999999998
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCCEEEEECCc--cccccCcHHHHHH
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNI 199 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~--~~~~~~~~~~~~~ 199 (341)
+||+. +++||||+|+|++|+++|++|+||||.. .+. .+.|+.+++.+||+|+.++.+ .|++ ..+.
T Consensus 104 ~vi~e-~ssGNhg~a~A~aa~~~G~~~~i~mp~~~~~~------~~~~~~~~~~~GA~V~~v~~~~~~~~~-----a~~~ 171 (396)
T 1qop_B 104 EIIAE-TGAGQHGVASALASALLGLKCRIYMGAKDVER------QSPNVFRMRLMGAEVIPVHSGSATLKD-----ACNE 171 (396)
T ss_dssp EEEEE-ESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHH------CHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHH
T ss_pred EEEEe-cCchHHHHHHHHHHHHCCCcEEEEEcCCchhh------hhhHHHHHHHCCCEEEEECCCCCCHHH-----HHHH
Confidence 88873 2458999999999999999999999974 321 135689999999999999752 3432 2222
Q ss_pred HHHHHHHhCCCcEEeCCCCC--chh--HHH-HHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCC
Q 019410 200 LKEKLLKEGRRPYVIPVGGS--NSI--GTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKA 274 (341)
Q Consensus 200 ~a~~l~~~g~~~~~ip~g~~--n~~--~~~-G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~ 274 (341)
..+.+.++.++.++++.++. +|. .+. ||.+++.||.+|+.+. .+..+|+||+|+|+||+++|++.+++ .++.+
T Consensus 172 a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~~~Ei~~Ql~~~-~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~ 249 (396)
T 1qop_B 172 ALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDK-EGRLPDAVIACVGGGSNAIGMFADFI-NDTSV 249 (396)
T ss_dssp HHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHH-HSSCCSEEEEECSSSHHHHHHHGGGT-TCTTS
T ss_pred HHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHHHHHHHHHHHHh-cCCCCCEEEEcCCchHHHHHHHHHHh-cCCCC
Confidence 22233443334566665533 333 233 7889999999999420 02469999999999999999999998 47999
Q ss_pred eEEEEeeCCCCc---cchHh--------------------------HHHHhhcccC-C----------CCCCceEEeccc
Q 019410 275 KVHAFSVCDDPD---YFYDY--------------------------TQGLLDGLNA-G----------VDSRDIVNIQNV 314 (341)
Q Consensus 275 rVigVe~~g~~~---~~~~~--------------------------i~~l~~~~~~-~----------~~~~~iv~v~d~ 314 (341)
|||||++.++.. .+.+. ...+.+++.. . -..++++.|+|.
T Consensus 250 ~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~V~d~ 329 (396)
T 1qop_B 250 GLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDD 329 (396)
T ss_dssp EEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTSSEEEEEEHH
T ss_pred EEEEEeCCCccccchhhHHHHHcCCeeeeccchhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHH
Confidence 999999998641 11111 1122222221 1 124789999999
Q ss_pred hHHHHHHHHHH
Q 019410 315 SVYMTFKNILM 325 (341)
Q Consensus 315 ~~~~~~~~~~~ 325 (341)
+++.+++.++.
T Consensus 330 e~~~a~~~l~~ 340 (396)
T 1qop_B 330 EALEAFKTLCR 340 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988865
No 37
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=99.97 E-value=7.2e-31 Score=265.15 Aligned_cols=231 Identities=13% Similarity=0.077 Sum_probs=169.2
Q ss_pred ccccCcCCCcccccCCCCCCC---C-ceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHH
Q 019410 39 VFSLGHFPTPIHKWNLPNLPH---N-TEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMA 114 (341)
Q Consensus 39 ~~~~~~~~TPl~~~~l~~L~~---g-~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~ 114 (341)
.+.++.++|||++ +++|++ | .+||+| +|++|| +||||+|++.+++.
T Consensus 123 iv~l~~g~TPLv~--l~~L~~~~lg~~~l~~K-------~E~~nP---------------------TGSFKDRga~~~~~ 172 (486)
T 1e5x_A 123 IVSAFEGNSNLFW--AERFGKQFLGMNDLWVK-------HCGISH---------------------TGSFKDLGMTVLVS 172 (486)
T ss_dssp CCCCCCCCCCEEE--CHHHHHHHHCCSSEEEE-------ETTSST---------------------TSBTTHHHHHHHHH
T ss_pred cccccCCCCCcEE--CcccchhhcCCCcEEEe-------eccCCC---------------------ccCHHHHHHHHHHH
Confidence 4677889999999 666543 3 489999 555555 57779999888776
Q ss_pred HHHH---c--CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCCEEEEECCccc
Q 019410 115 DAVA---Q--GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEY 188 (341)
Q Consensus 115 ~A~~---~--g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~ 188 (341)
.+.. + |.++||+ +|+||||+|+|++|+++|++|+||||.. ++ ..++.+++.+||+|+.++.. |
T Consensus 173 ~l~~~~~~~~g~~~Vv~--aSsGNtG~AlA~~a~~~Gi~~~I~~P~~~~s--------~~k~~~~~~~GA~vi~v~g~-~ 241 (486)
T 1e5x_A 173 QVNRLRKMKRPVVGVGC--ASTGDTSAALSAYCASAGIPSIVFLPANKIS--------MAQLVQPIANGAFVLSIDTD-F 241 (486)
T ss_dssp HHHHHHHTTCCCCEEEE--CCCSHHHHHHHHHHHHHTCCEEEEEEGGGCC--------HHHHHHHHHTTCEEEEEESC-H
T ss_pred HHHHHHHcCCCCeEEEE--cCCCHHHHHHHHHHHHcCCeEEEEECCCCCC--------HHHHHHHHhCCCEEEEECCC-H
Confidence 6544 2 5678886 5789999999999999999999999985 64 35789999999999999864 6
Q ss_pred cccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHh
Q 019410 189 SKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSW 268 (341)
Q Consensus 189 ~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k 268 (341)
++. .++++++.++. +.|+++. .|+..++||.+++.||++|+.. ..+|+||+|+|+||+++|++.+++
T Consensus 242 dd~------~~~a~~l~~~~-~~~~vns--~N~~~i~gq~t~~~Ei~~ql~~----~~~D~vvvpvG~GG~i~Gi~~a~k 308 (486)
T 1e5x_A 242 DGC------MKLIREITAEL-PIYLANS--LNSLRLEGQKTAAIEILQQFDW----QVPDWVIVPGGNLGNIYAFYKGFK 308 (486)
T ss_dssp HHH------HHHHHHHHHHS-CEEEGGG--SHHHHHHHHTHHHHHHHHHTTS----CCCSEEEEECSSTHHHHHHHHHHH
T ss_pred HHH------HHHHHHHHhcC-CEEEeCC--CCHHHHHHHHHHHHHHHHHcCC----CCCCEEEEeCCcHHHHHHHHHHHH
Confidence 542 23445555543 4666653 3899999999999999999852 358999999999999999999987
Q ss_pred cC---C---CCCeEEEEeeCCCCccch------------HhHHHHhhcccCCC---------CCCc----eEEeccchHH
Q 019410 269 LG---T---LKAKVHAFSVCDDPDYFY------------DYTQGLLDGLNAGV---------DSRD----IVNIQNVSVY 317 (341)
Q Consensus 269 ~~---~---~~~rVigVe~~g~~~~~~------------~~i~~l~~~~~~~~---------~~~~----iv~v~d~~~~ 317 (341)
+. | +.+|||+|++.+...... .....+++++..+. ..++ ++.|+|.+.+
T Consensus 309 ~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~gi~i~~p~~~~~~~~~~~~~~g~~~~Vsd~e~~ 388 (486)
T 1e5x_A 309 XCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELM 388 (486)
T ss_dssp HHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC----------------CCCHHHHHHHHHTTCEEEEECHHHHH
T ss_pred HhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCccccCCCCccHHHHHHHHhccCCeEEEECHHHHH
Confidence 64 3 788999999997643211 01234555443321 1334 8999999999
Q ss_pred HHHHHHH
Q 019410 318 MTFKNIL 324 (341)
Q Consensus 318 ~~~~~~~ 324 (341)
.+++ ++
T Consensus 389 ~ai~-l~ 394 (486)
T 1e5x_A 389 DAMA-QA 394 (486)
T ss_dssp HHHH-HH
T ss_pred HHHH-HH
Confidence 9988 54
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.97 E-value=3e-30 Score=256.42 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=165.3
Q ss_pred CCCcccccCCCCCCC---CceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHHHHHHHHcCC
Q 019410 45 FPTPIHKWNLPNLPH---NTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFLMADAVAQGA 121 (341)
Q Consensus 45 ~~TPl~~~~l~~L~~---g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~ll~~A~~~g~ 121 (341)
.+|||++ +++|++ |++||+| |||+++ +||||+|++.+++..|++.|.
T Consensus 80 ~~TPL~~--~~~Ls~~~gg~~i~lK--------------------------~E~lnp--tGSfK~R~a~~~~~~a~~~g~ 129 (422)
T 2o2e_A 80 RPSPLYE--ATRLSQHAGSARIFLK--------------------------REDLNH--TGSHKINNVLGQALLARRMGK 129 (422)
T ss_dssp CSCCEEE--CGGGGGGTTTCEEEEE--------------------------CGGGCC--SSTTHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEE--ChhhHhhcCCCeEEEE--------------------------EcCCCC--CCcHHHHHHHHHHHHHHHcCC
Confidence 5799999 777766 4799999 888865 788999999999888888898
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCc--cccccCcHHHHHH
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNI 199 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~--~~~~~~~~~~~~~ 199 (341)
+.+|+. +++||||+|+|++|+++|++|+||||...+. . ...|+..++.+||+|+.++.+ .|++ ....
T Consensus 130 ~~vI~~-~ssGNhG~A~A~aaa~~G~~~~I~mp~~~~~-~----q~~kv~~~~~~GA~Vv~v~~~~~~~~d-----a~~~ 198 (422)
T 2o2e_A 130 TRVIAE-TGAGQHGVATATACALLGLDCVIYMGGIDTA-R----QALNVARMRLLGAEVVAVQTGSKTLKD-----AINE 198 (422)
T ss_dssp CEEEEE-ESSSHHHHHHHHHHHHHTCEEEEEEEHHHHH-H----SHHHHHHHHHTTCEEEEECSTTSCHHH-----HHHH
T ss_pred CeEEEe-cCccHHHHHHHHHHHHcCCcEEEEeCCCcch-h----hHHHHHHHHHCCCEEEEECCCCCCHHH-----HHHH
Confidence 877753 2459999999999999999999999975321 0 135789999999999999752 3432 2222
Q ss_pred HHHHHHHhCCCcEEeCCCC--Cchh--HH-HHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCC
Q 019410 200 LKEKLLKEGRRPYVIPVGG--SNSI--GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKA 274 (341)
Q Consensus 200 ~a~~l~~~g~~~~~ip~g~--~n~~--~~-~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~ 274 (341)
..+.+.++.++.+++..++ ++|. .+ .|+.+++.||.+|+.+. .+..+|+||+|+|+||+++|++.+++. ++.+
T Consensus 199 a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~g~Ei~~Ql~~~-~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v 276 (422)
T 2o2e_A 199 AFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQ-AGRLPDAVVACVGGGSNAIGIFHAFLD-DPGV 276 (422)
T ss_dssp HHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHH-SSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTC
T ss_pred HHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHHh-hCCCCCEEEEccCCchhHHHHHHHHhc-CCCC
Confidence 2233344323445543332 3433 23 37889999999998531 124689999999999999999888764 7899
Q ss_pred eEEEEeeCCCC-------ccchH----------------------hHHHHhhccc-----C------CCCCCceEEeccc
Q 019410 275 KVHAFSVCDDP-------DYFYD----------------------YTQGLLDGLN-----A------GVDSRDIVNIQNV 314 (341)
Q Consensus 275 rVigVe~~g~~-------~~~~~----------------------~i~~l~~~~~-----~------~~~~~~iv~v~d~ 314 (341)
|||||++.++. ..+.. ....+.+++. + ....++++.|+|.
T Consensus 277 ~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~ 356 (422)
T 2o2e_A 277 RLVGFEAAGDGVETGRHAATFTAGSPGAFHGSFSYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGRVDYRPITDS 356 (422)
T ss_dssp EEEEEEECC-------------------------------------------------------------CCEEEEECHH
T ss_pred eEEEEecCCCcccchhHHHHHHcCCceeccccchhhcccccccccCCceeecccCCCCCCHHHHHHHHhCCeeEEEECHH
Confidence 99999999862 11110 0112322221 1 0123679999999
Q ss_pred hHHHHHHHHHH
Q 019410 315 SVYMTFKNILM 325 (341)
Q Consensus 315 ~~~~~~~~~~~ 325 (341)
+++.+++.++.
T Consensus 357 e~~~a~~~l~~ 367 (422)
T 2o2e_A 357 EAMDAFGLLCR 367 (422)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.93 E-value=2.2e-26 Score=229.06 Aligned_cols=199 Identities=13% Similarity=0.070 Sum_probs=142.4
Q ss_pred CCchHhHHHHHH---HHHHHHcCCCeEEEeCCCcchHHHHHH-HHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHh
Q 019410 101 LSGNKVRKLEFL---MADAVAQGADCIITIGGIQSNHCRAAA-VAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERL 175 (341)
Q Consensus 101 ~ggnK~Rkl~~l---l~~A~~~g~~~vVt~G~s~GNhg~AlA-~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~ 175 (341)
+||||+|++.++ +..+.+.+..+||+ +|+||||+|+| ++|+++|++|+||||.. ++ ..++++|+.
T Consensus 103 TgSfKdr~a~~l~~~l~~a~~~~~~~Iv~--atsGNtG~A~A~~~a~~~G~~~~I~~P~~~~s--------~~k~~~m~~ 172 (428)
T 1vb3_A 103 TLAFKDFGGRFMAQMLTHIAGDKPVTILT--ATSGDTGAAVAHAFYGLPNVKVVILYPRGKIS--------PLQEKLFCT 172 (428)
T ss_dssp TSBTHHHHHHHHHHHHHHHTTTCCEEEEE--ECSSSHHHHHHHHTTTCTTEEEEEEEETTCSC--------HHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCEEEe--cCCchHHHHHHHHHhhhcCCeEEEEECCCCCC--------HHHHHHHHh
Confidence 688899999888 45553333456665 57799999999 59999999999999984 64 357889999
Q ss_pred CCCEE--EEECCccccccCcHHHHHHHHHHHHH------hCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCC
Q 019410 176 VGAHI--ELISKEEYSKIGSVTLTNILKEKLLK------EGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKF 247 (341)
Q Consensus 176 ~GAeV--~~v~~~~~~~~~~~~~~~~~a~~l~~------~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~ 247 (341)
+||+| +.++. .|++. ...++++.+ +. . + ...+..|+....||.+++.||++|+.+ .+..+
T Consensus 173 ~GA~V~~v~v~g-~~d~~------~~~~~~~~~d~~~~~~~-~-~-~~~n~~n~~~~~gq~t~~~Ei~~ql~~--~g~~~ 240 (428)
T 1vb3_A 173 LGGNIETVAIDG-DFDAC------QALVKQAFDDEELKVAL-G-L-NSANSINISRLLAQICYYFEAVAQLPQ--ETRNQ 240 (428)
T ss_dssp CCTTEEEEEEES-CHHHH------HHHHHHGGGCHHHHHHH-T-E-ECCSTTSHHHHHHTTHHHHHHHTTSCT--TTTTS
T ss_pred cCCeEEEEEeCC-CHHHH------HHHHHHHHhchhhhhhc-C-e-eeCCCCCHHHHHHHHHHHHHHHHHccc--ccCCC
Confidence 99999 66665 35432 122233221 11 2 2 233446888899999999999999963 12369
Q ss_pred CEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHh-----------HHHHhhcccCCC-------------
Q 019410 248 DDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDY-----------TQGLLDGLNAGV------------- 303 (341)
Q Consensus 248 D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~-----------i~~l~~~~~~~~------------- 303 (341)
|+||+|+|+||+++|++.+++...|.+|||+|+..++ .+.+. +.++.+++...+
T Consensus 241 d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~--~l~~~~~~G~~~~~~~~~tis~g~~i~~p~~~~~~~~l~~~ 318 (428)
T 1vb3_A 241 LVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVND--TVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRR 318 (428)
T ss_dssp EEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCC--HHHHHHHHSCCCCCCCCCCSSGGGCCSSCTTHHHHHHHHHH
T ss_pred CEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCCh--HHHHHHHcCCcccCCCCCcccchhcCCCCccHHHHHHHHhc
Confidence 9999999999999999999987667779999986653 22111 123344432211
Q ss_pred C-----CCceEEeccchHHHHHHHH
Q 019410 304 D-----SRDIVNIQNVSVYMTFKNI 323 (341)
Q Consensus 304 ~-----~~~iv~v~d~~~~~~~~~~ 323 (341)
. .++++.|+|.+.+.+++.+
T Consensus 319 ~~~~~~~~~~~~Vsd~e~~~a~~~l 343 (428)
T 1vb3_A 319 KIWQLKELGYAAVDDETTQQTMREL 343 (428)
T ss_dssp TTCCGGGSEEEECCHHHHHHHHHHH
T ss_pred chhhhhCcEEEEECHHHHHHHHHHH
Confidence 0 3579999999999998887
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=99.87 E-value=1.2e-21 Score=196.58 Aligned_cols=177 Identities=12% Similarity=0.075 Sum_probs=129.1
Q ss_pred CcccccCCCCCCCCceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHH---HHHHH-HcCCC
Q 019410 47 TPIHKWNLPNLPHNTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFL---MADAV-AQGAD 122 (341)
Q Consensus 47 TPl~~~~l~~L~~g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~l---l~~A~-~~g~~ 122 (341)
|||++ +. -++|+| .|+.||+ |+||+|++.++ +..+. ++|.+
T Consensus 94 ~pl~~--l~-----~~~~~k-------ee~~~PT---------------------gSFKDRga~~~~~~l~~a~~~~g~~ 138 (468)
T 4f4f_A 94 CPLVQ--TD-----ANEFVL-------ELFHGPT---------------------LAFKDVAMQLLARMMDYVLAQRGER 138 (468)
T ss_dssp SCEEE--EE-----TTEEEE-------ECCCSTT---------------------SBTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CceEE--ec-----CCeehH-------HhccCCc---------------------ccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88888 42 269999 8888885 56699999988 77764 56664
Q ss_pred -eEEEeCCCcchHHHH-HHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCC-CEE--EEECCccccccCcHHH
Q 019410 123 -CIITIGGIQSNHCRA-AAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVG-AHI--ELISKEEYSKIGSVTL 196 (341)
Q Consensus 123 -~vVt~G~s~GNhg~A-lA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~G-AeV--~~v~~~~~~~~~~~~~ 196 (341)
+||+ +|+||||++ +|++|+++|++++||||.. ++ ..+...++.+| ++| +.+++ .|+++
T Consensus 139 ~~Vv~--ASSGNtG~aa~aa~a~~~Gi~~~I~~P~~~~s--------~~k~~~~~~~gganV~vv~v~g-~fdda----- 202 (468)
T 4f4f_A 139 ATIVG--ATSGDTGGAAIEAFGGRDNTDIFILFPNGRVS--------PVQQRQMTSSGFSNVHALSIEG-NFDDC----- 202 (468)
T ss_dssp EEEEE--ECSSHHHHHHHHHHTTCSSEEEEEEEETTCSC--------HHHHHHHHCSCCTTEEEEEEES-CHHHH-----
T ss_pred cEEEE--ECCchHHHHHHHHHHhccCCcEEEEeCCCCCC--------HHHHHHHHhcCCCeEEEeecCC-CHHHH-----
Confidence 6665 577999955 5777999999999999987 65 34678899997 555 66665 47543
Q ss_pred HHHHHHHHHHhC-----CCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE---EEEcCCchhHHHHHHHHHh
Q 019410 197 TNILKEKLLKEG-----RRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD---IVVACGSGGTIAGLSLGSW 268 (341)
Q Consensus 197 ~~~~a~~l~~~g-----~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~---Ivv~vGtGGt~aGl~~~~k 268 (341)
+++++++.+.. ...+.++. .|+..+.|+.|++.||++|+. .+|. ||||+|+||+++|++.+.+
T Consensus 203 -~~~~k~~~~d~~~~~~~~~~~vns--in~~ri~GQ~T~~~Ei~~ql~------~~d~~v~vvVPvG~GG~i~g~~~Ak~ 273 (468)
T 4f4f_A 203 -QNLVKGMFNDLEFCDALSLSGVNS--INWARIMPQVVYYFTAALSLG------APDRAVSFTVPTGNFGDIFAGYVAKR 273 (468)
T ss_dssp -HHHHHHHHHCHHHHHHHTEEECCT--TSHHHHGGGHHHHHHHHHHTT------TTSSCEEEEEECSSSHHHHHHHHHHH
T ss_pred -HHHHHHHHhccccccccceEeCCC--CCHHHHHhHHHHHHHHHHhcc------cCCCCeEEEEEeCCcHHHHHHHHHHH
Confidence 22333333210 12344433 488889999999999999985 4788 9999999999999998855
Q ss_pred cCCCCCeEEEEeeCCC
Q 019410 269 LGTLKAKVHAFSVCDD 284 (341)
Q Consensus 269 ~~~~~~rVigVe~~g~ 284 (341)
...|..|||+| +.+.
T Consensus 274 mGlPi~kli~a-~n~~ 288 (468)
T 4f4f_A 274 MGLPIEQLIIA-TNDN 288 (468)
T ss_dssp HTCCEEEEEEE-ECSC
T ss_pred hCCCCCEEEEE-eCCc
Confidence 43356699998 5543
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.86 E-value=9e-21 Score=192.25 Aligned_cols=191 Identities=12% Similarity=0.039 Sum_probs=131.0
Q ss_pred cCCCcccccCCCCCCCCceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHH---HHHHH-Hc
Q 019410 44 HFPTPIHKWNLPNLPHNTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFL---MADAV-AQ 119 (341)
Q Consensus 44 ~~~TPl~~~~l~~L~~g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~l---l~~A~-~~ 119 (341)
.+.|||+++-++++ .+||+| .|++||+ |+||||.+.++ +.+++ ++
T Consensus 94 ~g~TPLv~~~l~~l---~~l~~K-------~e~~nPT---------------------gSFKDrga~~~~~~~~~a~~~~ 142 (514)
T 1kl7_A 94 DEVTPLVQNVTGDK---ENLHIL-------ELFHGPT---------------------YAFKDVALQFVGNLFEYFLQRT 142 (514)
T ss_dssp TTSSCEECCTTCSS---SCEEEE-------ECCCSTT---------------------SBTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeehhcccc---cchhhh-------hhccCCC---------------------CcHHHHHHHHHHHHHHHHHHhc
Confidence 67799998212333 479999 8988885 55699999888 44543 34
Q ss_pred C---------CCeEEEeCCCcchHHHHHHHHH--HHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHH--hCCCEEEEECC
Q 019410 120 G---------ADCIITIGGIQSNHCRAAAVAA--KYLNLDCYLILRTS-KVLVDQDPGLIGNLLVER--LVGAHIELISK 185 (341)
Q Consensus 120 g---------~~~vVt~G~s~GNhg~AlA~aa--~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~--~~GAeV~~v~~ 185 (341)
| ..+||+ +|+||||.| |++| ++.|++++|+||.. ++.. .+.++++ .+|++|+.++.
T Consensus 143 g~~~~~~~~~~~~Iv~--ATSGNtG~A-A~~a~a~~~Gi~~~I~~P~~~~S~~-------q~~qm~~~~g~~~~vv~v~g 212 (514)
T 1kl7_A 143 NANLPEGEKKQITVVG--ATSGDTGSA-AIYGLRGKKDVSVFILYPTGRISPI-------QEEQMTTVPDENVQTLSVTG 212 (514)
T ss_dssp HTTSCSSSCCCEEEEE--ECSSSHHHH-HHHHHTTCTTEEEEEEEETTSSCHH-------HHHHHHHCCCTTEEEEEESS
T ss_pred CCccccccCCCCEEEE--CCCCcHHHH-HHHHHHhhcCCeEEEEEcCCCCCHH-------HHHHHhhhcCCCEEEEEcCC
Confidence 5 345665 578999999 6666 89999999999986 6421 1233433 45567777765
Q ss_pred ccccccCcHHHHHHHHHHHHHhCC--CcE-EeCCCCCchhHHHHHHHHHHHHHHHH-hcCCCCCCCCEEEEcCCchhHHH
Q 019410 186 EEYSKIGSVTLTNILKEKLLKEGR--RPY-VIPVGGSNSIGTWGYIEAIKEIEQQL-QTGTGGVKFDDIVVACGSGGTIA 261 (341)
Q Consensus 186 ~~~~~~~~~~~~~~~a~~l~~~g~--~~~-~ip~g~~n~~~~~G~~t~a~EI~~Ql-~~~~~g~~~D~Ivv~vGtGGt~a 261 (341)
.|+++ ...++++.+..+ ..+ +...+..|+..+.|+.+.+.|+.+|+ +. ....+|+||+|+|+||++.
T Consensus 213 -~fdda------~~~vk~l~~~~~~~~~~~~~~~Ns~N~~ri~gQ~tyy~e~~~ql~~~--~~~~~d~~vvP~GngG~i~ 283 (514)
T 1kl7_A 213 -TFDNC------QDIVKAIFGDKEFNSKHNVGAVNSINWARILAQMTYYFYSFFQATNG--KDSKKVKFVVPSGNFGDIL 283 (514)
T ss_dssp -CHHHH------HHHHHHHHHCSSCC--CCBCCCCSCCHHHHHHHHHHHHHHHHHHHSS--SSCCCEEEEEECSSSHHHH
T ss_pred -CHHHH------HHHHHHHHhcccccccceeEeeCCCCHhHHhhHHHHHHHHHHHHhhh--cCCCCcEEEEECCchHHHH
Confidence 46542 334555554311 001 11223347877889999999999999 31 1246899999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEeeCCC
Q 019410 262 GLSLGSWLGTLKAKVHAFSVCDD 284 (341)
Q Consensus 262 Gl~~~~k~~~~~~rVigVe~~g~ 284 (341)
|.+.+.+...|..|+|+|+++++
T Consensus 284 a~~~ak~~G~p~~rli~v~~~n~ 306 (514)
T 1kl7_A 284 AGYFAKKMGLPIEKLAIATNEND 306 (514)
T ss_dssp HHHHHHHHTCCCCCEEEEECSCC
T ss_pred HHHHHHHcCCCCCEEEEEeCCcc
Confidence 98876555456779999999873
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.84 E-value=3.8e-20 Score=186.09 Aligned_cols=185 Identities=10% Similarity=0.018 Sum_probs=134.2
Q ss_pred CcccccCCCCCCCCceEEEeeCCCCCCccccCccchhhHhhhhhcccccccCCCCCchHhHHHHHH---HHHHH-HcCCC
Q 019410 47 TPIHKWNLPNLPHNTEVWLKSNFSGVSDDFWNLWGFERICYVLLLQRDDLSGMQLSGNKVRKLEFL---MADAV-AQGAD 122 (341)
Q Consensus 47 TPl~~~~l~~L~~g~~v~~K~~~~~~~~e~~np~gs~~~~~~~~~~REDl~~~~~ggnK~Rkl~~l---l~~A~-~~g~~ 122 (341)
|||++ +.. ..+.++|+| .|+.||+ |+||||++..+ +..+. ++|.+
T Consensus 103 ~Pl~~--l~~-~~~~~l~vk-------ee~~~PT---------------------gSFKDRga~~~~~ll~~a~~~~g~~ 151 (487)
T 3v7n_A 103 TPLTT--LGT-ENGAPVSLL-------ELSNGPT---------------------LAFKDMAMQLLGNLFEYTLAKHGET 151 (487)
T ss_dssp SCEEE--EEE-ETTEEEEEE-------ECCCSTT---------------------SBTHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceeEE--ecC-CCCcceeHH-------hhccCCc---------------------CcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 78888 421 002249999 8888885 56699999888 78875 45665
Q ss_pred e-EEEeCCCcchHHHHHHHHHH-HcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCC---EEEEECCccccccCcHHH
Q 019410 123 C-IITIGGIQSNHCRAAAVAAK-YLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGA---HIELISKEEYSKIGSVTL 196 (341)
Q Consensus 123 ~-vVt~G~s~GNhg~AlA~aa~-~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GA---eV~~v~~~~~~~~~~~~~ 196 (341)
. ||+ +|+||||.|+|++++ ++|++++|+||.. ++ ..+..+|+.+|| +|+.+++ .|+++
T Consensus 152 ~~Vv~--ASSGNtG~Aaa~a~~~~~Gi~~~I~~P~~~~s--------~~k~~qm~~~Ga~nv~vv~v~G-~fDda----- 215 (487)
T 3v7n_A 152 LNILG--ATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMS--------AFQTAQMYSLQDPNIFNLAVNG-VFDDC----- 215 (487)
T ss_dssp EEEEE--ECSSHHHHHHHHHHTTCTTEEEEEEEETTCSC--------HHHHHHHHTCCCTTEEEEEEES-CHHHH-----
T ss_pred cEEEE--eCChHHHHHHHHHHHhccCCeEEEEECCCCCC--------HHHHHHHHhcCCCcEEEEEECC-CHHHH-----
Confidence 4 665 577999999887876 8999999999987 65 346889999998 6777775 46542
Q ss_pred HHHHHHHHHHh-----CCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC
Q 019410 197 TNILKEKLLKE-----GRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT 271 (341)
Q Consensus 197 ~~~~a~~l~~~-----g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~ 271 (341)
+++++++... ....++++ ..|+..+.|+.+.+.|+..|+.+ .+..+|.||||+|+||+++|++.+.+...
T Consensus 216 -~~~vk~~~~d~~~~~~~~l~~vn--s~Np~ri~gQ~tyy~~~~~el~~--~~~~~d~vvVP~GngG~i~g~~~A~~mGl 290 (487)
T 3v7n_A 216 -QDIVKAVSNDHAFKAQQKIGTVN--SINWARVVAQVVYYFKGYFAATR--SNDERVSFTVPSGNFGNVCAGHIARMMGL 290 (487)
T ss_dssp -HHHHHHHHTCHHHHHHTTEECCS--TTCHHHHHHHHHHHHHHHHHTCS--STTCCEEEEEGGGCHHHHHHHHHHHHTTC
T ss_pred -HHHHHHhhhchHHHhhcCeeeeC--CCCHHHHHhHHHHHHHHHHHHHh--cCCCCcEEEEecCchHHHHHHHHHHHcCC
Confidence 2233333320 11234443 34788889999888888888742 23569999999999999999998766433
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
|-.|||+|+.++
T Consensus 291 p~~rli~a~~~n 302 (487)
T 3v7n_A 291 PIEKLVVATNEN 302 (487)
T ss_dssp CEEEEEEECTTC
T ss_pred CCceEEEEeCCC
Confidence 656999999886
No 43
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=86.78 E-value=16 Score=32.23 Aligned_cols=160 Identities=8% Similarity=-0.051 Sum_probs=78.1
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-----cCCCCCcchh---HHHHHhCCC--E
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLVGA--H 179 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-----~~~~~~~~gn---~~~~~~~GA--e 179 (341)
...+.....++.+.||..+ ...+........+...|++++.+-....+. ...+....+. ..+++.+|. +
T Consensus 51 ~~~~~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~v~~d~~~~g~~a~~~l~~~~g~~~~ 129 (303)
T 3d02_A 51 VKIIEDLIARKVDAITIVP-NDANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGG 129 (303)
T ss_dssp HHHHHHHHHTTCSEEEECC-SCHHHHHHHHHHHHHTTCEEEEESCTTCTTCSEEEESSCHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHcCCCEEEEec-CChHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEecCHHHHHHHHHHHHHHHhCcCce
Confidence 3456666678899988654 333333344455667899988774320110 0000000111 122233675 7
Q ss_pred EEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCC-chhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchh
Q 019410 180 IELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 258 (341)
Q Consensus 180 V~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~-n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGG 258 (341)
+.++....-.. ....+.+...+.+++.++..-++..... +.....++ ....+++++- .++|+||+. +..
T Consensus 130 i~~i~g~~~~~-~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d~ 199 (303)
T 3d02_A 130 YVIYVGSLTVP-QHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSR-RTTLDLMKTY------PDLKAVVSF--GSN 199 (303)
T ss_dssp EEEECSCSSCH-HHHHHHHHHHHHHHHHCTTEEESSSCBSCTTCHHHHH-HHHHHHHHHC------TTEEEEEES--STT
T ss_pred EEEEecCCCCc-cHHHHHHHHHHHHHhhCCCCEEEEeecCCCCCHHHHH-HHHHHHHHhC------CCCCEEEEe--CCc
Confidence 76665321100 1112233344445544433223322111 11112233 2344554432 358888875 446
Q ss_pred HHHHHHHHHhcCCC--CCeEEEEe
Q 019410 259 TIAGLSLGSWLGTL--KAKVHAFS 280 (341)
Q Consensus 259 t~aGl~~~~k~~~~--~~rVigVe 280 (341)
.+.|+..+++..+. ++.|+|++
T Consensus 200 ~a~g~~~al~~~g~~~dv~vig~d 223 (303)
T 3d02_A 200 GPIGAGRAVKEKRAKNKVAVYGMM 223 (303)
T ss_dssp HHHHHHHHHHHTTCTTTCEEEECC
T ss_pred chhHHHHHHHhcCCCCCeEEEEeC
Confidence 77899999988775 68888854
No 44
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.20 E-value=8.2 Score=30.80 Aligned_cols=31 Identities=6% Similarity=-0.035 Sum_probs=24.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
++|+.+|. |..|..+|...+..|++++++-+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEEC
Confidence 34555665 89999999999999988777754
No 45
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=84.91 E-value=10 Score=33.66 Aligned_cols=65 Identities=15% Similarity=0.114 Sum_probs=44.9
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++.|.++|+.+|-. .+.| .+.|.-|..+|++++|+.+.......+ .....+..|+..|++|+..+
T Consensus 153 ~~~gi~~lvv~G~~-T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~--~h~~aL~~m~~~g~~v~~s~ 218 (227)
T 3r2j_A 153 HSIGARRVFVCGVA-YDFCVFFTAMDARKNGFSVVLLEDLTAAVDDA--AWSARTAELKDAGVVLLKSS 218 (227)
T ss_dssp HHHTCCEEEEEESC-TTTHHHHHHHHHHHTTCEEEEEEEEECCSCGG--GHHHHHHHHHTTTCEEECGG
T ss_pred HHcCCCEEEEEEec-cchHHHHHHHHHHHCCCEEEEEhHhhCCCCHH--HHHHHHHHHHHcCCEEEEHH
Confidence 34689999987644 5555 588999999999999987754432111 11234777888999887544
No 46
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=84.66 E-value=17 Score=32.04 Aligned_cols=206 Identities=11% Similarity=0.039 Sum_probs=97.2
Q ss_pred HHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcC----CCCC-cchhH--------HHHHh
Q 019410 109 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVD----QDPG-LIGNL--------LVERL 175 (341)
Q Consensus 109 l~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~----~~~~-~~gn~--------~~~~~ 175 (341)
....++.+..++.+.||..+ ...+........++..|++++++-........ ..+. ...|. .+++.
T Consensus 46 ~~~~i~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~ 124 (306)
T 8abp_A 46 TLNAIDSLAASGAKGFVICT-PDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKE 124 (306)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-SCGGGHHHHHHHHHHTTCEEEEESSCCBCTTSCBCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeC-CCchhhHHHHHHHHHCCCcEEEeCCCCCCccccccccccEEecChhHHHHHHHHHHHHH
Confidence 34456777788899998764 33344444445677789998887522111000 0000 00111 22223
Q ss_pred CCC------EEEEE--CCccccccCcHHHHHHHHHHHHHhC-CC--cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCC
Q 019410 176 VGA------HIELI--SKEEYSKIGSVTLTNILKEKLLKEG-RR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGG 244 (341)
Q Consensus 176 ~GA------eV~~v--~~~~~~~~~~~~~~~~~a~~l~~~g-~~--~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g 244 (341)
+|. ++-++ +..... ...++.+-..+.+++.| +. ...+..+..+. ..|+ ..+.+++++ .
T Consensus 125 ~g~~~~~~~~i~~~~~~~~~~~--~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~------~ 193 (306)
T 8abp_A 125 MQKRGWDVKESAVMAITANELD--TARRRTTGSMDALKAAGFPEKQIYQVPTKSNDI--PGAF-DAANSMLVQ------H 193 (306)
T ss_dssp HHHHTCCGGGEEEEEEECTTSH--HHHHHHHHHHHHHHHHTCCGGGEEEEECSSSSH--HHHH-HHHHHHHTT------C
T ss_pred HHhcCCCccceEEEEecCCCCh--HHHHHHHHHHHHHHhcCCCCcEEEeeccCCCCh--HHHH-HHHHHHHHh------C
Confidence 333 33222 221111 11123334444555543 11 12222222222 2233 234444433 2
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC---CCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccchHHHHHH
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL---KAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFK 321 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~---~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~~~~~~~ 321 (341)
.++|++++-+.+...+.|+..+++..+. ++.|+|++-.. ..+ .+.++..... ...|...-.+.-...-
T Consensus 194 ~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~~~----~~~---~~~~~~~~~~--~ttv~~~~~~~G~~a~ 264 (306)
T 8abp_A 194 PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVD----AVS---ELSKAQATGF--YGSLLPSPDVHGYKSS 264 (306)
T ss_dssp TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSGG----GHH---HHTSSSCCSE--EEEEECCHHHHHHHHH
T ss_pred CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCcHH----HHH---HHHcCCCcce--EEEecCCHHHHHHHHH
Confidence 4688855557788889999999998875 67788765332 111 2223221101 1233333333444445
Q ss_pred HHHHHHHhcCCCCC
Q 019410 322 NILMNILMNGKQPT 335 (341)
Q Consensus 322 ~~~~~~~~~~~~~~ 335 (341)
.++.+.+.+|+.|.
T Consensus 265 ~~l~~~i~~g~~~~ 278 (306)
T 8abp_A 265 EMLYNWVAKDVEPP 278 (306)
T ss_dssp HHHHHHHHHCCCCC
T ss_pred HHHHHHHhcCCCCc
Confidence 55666666777654
No 47
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=84.16 E-value=21 Score=31.30 Aligned_cols=202 Identities=8% Similarity=-0.038 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-----cCCCCCcchh--HHHHHhCC---
Q 019410 108 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--LLVERLVG--- 177 (341)
Q Consensus 108 kl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-----~~~~~~~~gn--~~~~~~~G--- 177 (341)
....++..+..++.+.||..+. ..+........+...|++++++-...... +..+....+. .+.+...|
T Consensus 57 ~~~~~i~~l~~~~vdgiii~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~~ 135 (304)
T 3gbv_A 57 SFVATSQAVIEEQPDGVMFAPT-VPQYTKGFTDALNELGIPYIYIDSQIKDAPPLAFFGQNSHQSGYFAARMLMLLAVND 135 (304)
T ss_dssp HHHHHHHHHHTTCCSEEEECCS-SGGGTHHHHHHHHHHTCCEEEESSCCTTSCCSEEEECCHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhcCCCEEEECCC-ChHHHHHHHHHHHHCCCeEEEEeCCCCCCCceEEEecChHHHHHHHHHHHHHHhCCC
Confidence 3445677777889999997643 33333444555677799988775432110 0000000111 12222233
Q ss_pred CEEEEEC----CccccccCcHHHHHHHHHHHHHhCCCcE--EeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEE
Q 019410 178 AHIELIS----KEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIV 251 (341)
Q Consensus 178 AeV~~v~----~~~~~~~~~~~~~~~~a~~l~~~g~~~~--~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Iv 251 (341)
.+|.++. ...... ....+.+.+.+.+++.+...- .+..+..+.. .++ ....+++++- .++|+||
T Consensus 136 ~~i~~i~~~~~g~~~~~-~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~------~~~~ai~ 205 (304)
T 3gbv_A 136 REIVIFRKIHEGVIGSN-QQESREIGFRQYMQEHHPACNILELNLHADLNI--EDS-RMLDDFFREH------PDVKHGI 205 (304)
T ss_dssp SEEEEEEEEBTTBCCCH-HHHHHHHHHHHHHHHHCTTSEEEEEEEESSCSS--CHH-HHHHHHHHHC------TTCCEEE
T ss_pred CeEEEEEecccCCccch-hHHHHHHHHHHHHHhhCCCcEEEEeeecCCCHH--HHH-HHHHHHHHhC------CCeEEEE
Confidence 5776664 111000 111233344445555543321 1212212222 233 3445665542 3689999
Q ss_pred EcCCchhHHHHHHHHHhcCCC-CCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccchHHHHHHHHHHHHHhc
Q 019410 252 VACGSGGTIAGLSLGSWLGTL-KAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMN 330 (341)
Q Consensus 252 v~vGtGGt~aGl~~~~k~~~~-~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~~~~~~~~~~~~~~~~ 330 (341)
+.... +.|+..+++..+. ++.|+|++-.. ...+ .+.++.. .-.|...-.+.....-.++.+.+.+
T Consensus 206 ~~~d~---a~g~~~al~~~g~~di~vig~d~~~---~~~~---~~~~~~~-----~~tv~~~~~~~g~~av~~l~~~i~~ 271 (304)
T 3gbv_A 206 TFNSK---VYIIGEYLQQRRKSDFSLIGYDLLE---RNVT---CLKEGTV-----SFLIAQQPELQGFNSIKTLCDHLIF 271 (304)
T ss_dssp ESSSC---THHHHHHHHHTTCCSCEEEEESCCH---HHHH---HHHHTSE-----EEEEECCHHHHHHHHHHHHHHHHTS
T ss_pred EcCcc---hHHHHHHHHHcCCCCcEEEEeCCCH---HHHH---HHHcCce-----EEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 86654 5689999998874 88888875321 1011 1222211 0133333345555566666777777
Q ss_pred CCCC
Q 019410 331 GKQP 334 (341)
Q Consensus 331 ~~~~ 334 (341)
|+.+
T Consensus 272 ~~~~ 275 (304)
T 3gbv_A 272 RKEV 275 (304)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7665
No 48
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=83.13 E-value=6.8 Score=34.83 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=22.4
Q ss_pred CCCeEEEeCCCc-chHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~-GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |+++ .--|+++|..-++.|.++++.-+.
T Consensus 6 gK~alVT-Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIM-GIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEE-CCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4445666 5432 246788888888888887766543
No 49
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=82.50 E-value=16 Score=32.93 Aligned_cols=56 Identities=18% Similarity=-0.006 Sum_probs=33.0
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
|...||| ||+ +.-|+++|..-++.|.+++++-+.... ...-...++..|.+++.+.
T Consensus 7 gKvalVT-Gas-~GIG~aiA~~la~~Ga~Vv~~~~~~~~-------~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 7 NKVVIVT-GAG-SGIGRAIAKKFALNDSIVVAVELLEDR-------LNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHcCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 4445666 544 578889888888888876665432110 0112445566677766554
No 50
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=81.94 E-value=14 Score=33.03 Aligned_cols=160 Identities=13% Similarity=0.041 Sum_probs=78.4
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCC------cchh--H-HHHHhCCCE-
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG------LIGN--L-LVERLVGAH- 179 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~------~~gn--~-~~~~~~GAe- 179 (341)
...++.+..++++.||..+. ..+........++..|++++++-..... ..-.+. ..+. . .+++..|..
T Consensus 48 ~~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~-~~~~~~V~~D~~~~g~~a~~~L~~~~G~~~ 125 (313)
T 3m9w_A 48 MSQIENMINRGVDVLVIIPY-NGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIVPQGN 125 (313)
T ss_dssp HHHHHHHHHTTCSEEEEECS-STTSCHHHHHHHHTTTCEEEEESSCCTT-SCCSEEEEECHHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHHcCCCEEEEeCC-ChhhhHHHHHHHHHCCCeEEEECCcCCC-CCceEEEecCHHHHHHHHHHHHHHhCCCCc
Confidence 34566777788999987643 2333234555667789998877442211 000000 0111 1 222245654
Q ss_pred EEEECCccccccCcHHHHHHHHHHHHHhC--CCcEEeCCC-CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 019410 180 IELISKEEYSKIGSVTLTNILKEKLLKEG--RRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGS 256 (341)
Q Consensus 180 V~~v~~~~~~~~~~~~~~~~~a~~l~~~g--~~~~~ip~g-~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGt 256 (341)
|.++....... ...++.+...+.+++.+ +..-++... ..+.....++ ..+.+++++.+ .++|+||+. +
T Consensus 126 i~~i~g~~~~~-~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~-----~~~~ai~~~--~ 196 (313)
T 3m9w_A 126 YFLMGGSPVDN-NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL-KIMENALTANN-----NKIDAVVAS--N 196 (313)
T ss_dssp EEEEESCTTCH-HHHHHHHHHHHHHHHHHHTTSEEEEEEEECGGGCHHHHH-HHHHHHHHHTT-----TCCCEEEES--S
T ss_pred EEEEECCCCCc-cHHHHHHHHHHHHHhhccCCCEEEEeeccCCCcCHHHHH-HHHHHHHHhCC-----CCeeEEEEC--C
Confidence 55553211100 01122233333344331 122222211 1111122233 34556655431 369999975 5
Q ss_pred hhHHHHHHHHHhcCCC--CCeEEEEe
Q 019410 257 GGTIAGLSLGSWLGTL--KAKVHAFS 280 (341)
Q Consensus 257 GGt~aGl~~~~k~~~~--~~rVigVe 280 (341)
...+.|+..+++..+. ++.|+|++
T Consensus 197 d~~a~g~~~al~~~G~~~di~vig~d 222 (313)
T 3m9w_A 197 DATAGGAIQALSAQGLSGKVAISGQD 222 (313)
T ss_dssp HHHHHHHHHHHHTTTCTTTSEECCCS
T ss_pred CchHHHHHHHHHHcCCCCCcEEEecC
Confidence 6778899999998775 57777654
No 51
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=79.62 E-value=4.2 Score=37.81 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 109 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 109 l~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
+..++..+...|.++|+..|| .|.-|.+++..|+.+|.+++++.+.. .++..++.+||+.++-
T Consensus 153 a~~~~~~~~~~g~~~vli~gg-~g~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~~Ga~~~~~ 215 (349)
T 3pi7_A 153 AIAMFDIVKQEGEKAFVMTAG-ASQLCKLIIGLAKEEGFRPIVTVRRD-----------EQIALLKDIGAAHVLN 215 (349)
T ss_dssp HHHHHHHHHHHCCSEEEESST-TSHHHHHHHHHHHHHTCEEEEEESCG-----------GGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEEE
Confidence 334555555556566665544 47899999999999999766665422 2577888999976544
No 52
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=77.83 E-value=6.9 Score=36.70 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=33.9
Q ss_pred HcCCC-eEEEeCCC----------------cchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 118 AQGAD-CIITIGGI----------------QSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 118 ~~g~~-~vVt~G~s----------------~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
..|.+ .+||.|+| +|..|.++|-++...|.+++++.....
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 46777 78899886 599999999999999999998887543
No 53
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=77.45 E-value=3.9 Score=35.02 Aligned_cols=63 Identities=17% Similarity=0.224 Sum_probs=43.4
Q ss_pred HHHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 116 AVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 116 A~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
.++.|.++|+.+|-. .+.| .+.|.-|..+|++++|+.+.......+ .....++.|+..|++|+
T Consensus 120 L~~~gi~~lvv~G~~-t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~--~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 120 LRQRGVDEVDVVGIA-TDHCVRQTAEDAVRNGLATRVLVDLTAGVSAD--TTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTTCEEE
T ss_pred HHhcCCCEEEEEEec-ccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHH--HHHHHHHHHHHcCCEEe
Confidence 345789999987644 4555 688999999999999997754432111 01234778888898875
No 54
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=77.43 E-value=18 Score=32.17 Aligned_cols=32 Identities=22% Similarity=0.084 Sum_probs=23.9
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 16 k~~lVT-Ga-s~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFIT-GA-ARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEec
Confidence 344555 54 368899999999999999887755
No 55
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.67 E-value=19 Score=32.37 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=21.1
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
|...||| ||+ +.-|+++|..-++.|.++++.
T Consensus 9 gKvalVT-Gas-~GIG~aia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 9 GKTALVT-GSA-RGLGFAYAEGLAAAGARVILN 39 (255)
T ss_dssp TCEEEET-TCS-SHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEe-CCC-cHHHHHHHHHHHHCCCEEEEE
Confidence 3344555 544 578889888888888876554
No 56
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=76.62 E-value=5.9 Score=34.80 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=43.3
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCC-CcchhHHHHHhCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP-GLIGNLLVERLVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~-~~~gn~~~~~~~GAeV~ 181 (341)
++.|.++|+.+|-....=-.+.|..|..+|++++|+.+.......+ + .....+..|+..|++|+
T Consensus 150 ~~~gi~~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~-~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 150 EKHHTDEVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDD-PEVINKVKEELKAHNINVV 214 (216)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCC-HHHHHHHHHHHHHTTCEEE
T ss_pred HhCCCCEEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcc-cHHHHHHHHHHHHcCCEEe
Confidence 4578999998765544445688999999999999997754432111 0 11234778888898774
No 57
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=76.37 E-value=3.2 Score=37.29 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=30.8
Q ss_pred CCCeEEEeCCC--------------cchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 120 GADCIITIGGI--------------QSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 120 g~~~vVt~G~s--------------~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
|...+||.|+| +|-.|.++|.++.+.|.+++++....
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 55667787653 89999999999999999999887654
No 58
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=75.90 E-value=44 Score=29.97 Aligned_cols=33 Identities=21% Similarity=0.140 Sum_probs=24.5
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
...||| |++ +.-|.++|..-.+.|.+++++-+.
T Consensus 29 k~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 29 KVAFIT-GAA-RGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEE-CCC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 344555 544 678999999999999998877554
No 59
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=75.21 E-value=28 Score=30.91 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=24.8
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |++ +--|.++|..-.+.|.+++++-+.
T Consensus 11 ~k~~lVT-Gas-~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 11 GKVAFVT-GAA-RGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TCEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEe-CCC-chHHHHHHHHHHHCCCeEEEEecc
Confidence 3344555 544 678999999999999998777554
No 60
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.45 E-value=31 Score=28.40 Aligned_cols=29 Identities=10% Similarity=-0.096 Sum_probs=22.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHc-CCeEEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYL-NLDCYLIL 153 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~-Gl~~~ivv 153 (341)
+|+.+|. |..|..+|...... |.+++++-
T Consensus 41 ~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid 70 (183)
T 3c85_A 41 QVLILGM--GRIGTGAYDELRARYGKISLGIE 70 (183)
T ss_dssp SEEEECC--SHHHHHHHHHHHHHHCSCEEEEE
T ss_pred cEEEECC--CHHHHHHHHHHHhccCCeEEEEE
Confidence 4555664 89999999998888 88877664
No 61
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=74.19 E-value=45 Score=29.19 Aligned_cols=35 Identities=20% Similarity=0.082 Sum_probs=27.8
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCC----CCCeEEEEee
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFSV 281 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~----~~~rVigVe~ 281 (341)
.++|+||+ .+...+.|+..+++..+ .++.|+|++-
T Consensus 187 ~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~d~ 225 (288)
T 3gv0_A 187 DRPDGIVS--ISGSSTIALVAGFEAAGVKIGEDVDIVSKQS 225 (288)
T ss_dssp SCCSEEEE--SCHHHHHHHHHHHHTTTCCTTTSCEEEEEES
T ss_pred CCCcEEEE--cCcHHHHHHHHHHHHcCCCCCCceEEEEecC
Confidence 46899986 45678889999999877 3678998774
No 62
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=73.25 E-value=7.2 Score=36.17 Aligned_cols=48 Identities=10% Similarity=-0.062 Sum_probs=35.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+++++.+.. .++..++.+||+.++
T Consensus 178 ~~VlV~Ga--G~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 178 TKVGVAGF--GGLGSMAVKYAVAMGAEVSVFARNE-----------HKKQDALSMGVKHFY 225 (348)
T ss_dssp CEEEEESC--SHHHHHHHHHHHHTTCEEEEECSSS-----------TTHHHHHHTTCSEEE
T ss_pred CEEEEECC--cHHHHHHHHHHHHCCCeEEEEeCCH-----------HHHHHHHhcCCCeec
Confidence 55555663 7899999999999999755554322 247788999998666
No 63
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=73.22 E-value=43 Score=29.70 Aligned_cols=34 Identities=21% Similarity=0.159 Sum_probs=23.7
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |++ |--|.++|..-.+.|.+++++...
T Consensus 31 gk~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 31 GKTAFVT-GGS-RGIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344555 543 678999999888899887776443
No 64
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=73.22 E-value=7.7 Score=34.36 Aligned_cols=64 Identities=14% Similarity=0.051 Sum_probs=43.8
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCc-CCCCCcchhHHHHHhCCCEEEE
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV-DQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~-~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++|+-+...... .+ .....+..|+..|++|+.
T Consensus 163 ~~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~--~~~~aL~~m~~~g~~v~t 227 (235)
T 2wt9_A 163 KERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNG--SLEQAWQTMQQQGVVRIQ 227 (235)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECCCSTT--HHHHHHHHHHHTTCEEEC
T ss_pred HHCCCCEEEEEEeCccHHHHHHHHHHHhCCCEEEEechhccCCChhH--HHHHHHHHHHHcCCEEEE
Confidence 45789999987654434446889999999999999877544321 11 112347778888998864
No 65
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=73.11 E-value=22 Score=30.65 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=58.0
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEe
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNI 311 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v 311 (341)
.|+.++..+ ..++.|++.+|.-+-+.|+..++ -...||||.+......+...+..+.+-- .++. +.+|
T Consensus 67 ~~~~~~a~~----~g~~ViIa~AG~aahLpGvvAa~----T~~PVIGVPv~s~~l~G~DsLlSivQMP-~Gvp---VaTv 134 (181)
T 4b4k_A 67 FEYAETARE----RGLKVIIAGAGGAAHLPGMVAAK----TNLPVIGVPVQSKALNGLDSLLSIVQMP-GGVP---VATV 134 (181)
T ss_dssp HHHHHHTTT----TTCCEEEEEECSSCCHHHHHHTT----CCSCEEEEECCCTTTTTHHHHHHHHTCC-TTCC---CEEC
T ss_pred HHHHHHHHh----cCceEEEEeccccccchhhHHhc----CCCCEEEEecCCCCccchhhHHHHHhCC-CCCc---eEEE
Confidence 445554432 35889999999999999998775 3568999999876655666666666433 2444 4566
Q ss_pred ccc-hHHHHHHHHHHHHHh
Q 019410 312 QNV-SVYMTFKNILMNILM 329 (341)
Q Consensus 312 ~d~-~~~~~~~~~~~~~~~ 329 (341)
.-| .+..+.-.+|..||-
T Consensus 135 aig~~ga~NAallA~qILa 153 (181)
T 4b4k_A 135 AIGKAGSTNAGLLAAQILG 153 (181)
T ss_dssp CSSHHHHHHHHHHHHHHHT
T ss_pred ecCCccHHHHHHHHHHHHc
Confidence 656 345566667777764
No 66
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=72.93 E-value=6.1 Score=33.33 Aligned_cols=63 Identities=19% Similarity=0.157 Sum_probs=41.9
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++++.+.......+ .....+..|+..|++|+
T Consensus 116 ~~~gi~~lvi~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~~~~~~~--~h~~al~~m~~~g~~v~ 178 (180)
T 1im5_A 116 RGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPE--DEERALEEMKSRGIKIV 178 (180)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTTCEEE
T ss_pred HhCCCCEEEEEEeecCHHHHHHHHHHHHCCCEEEEehhhccCCCHH--HHHHHHHHHHHcCCEEE
Confidence 4568999997764443344578888999999999988755432111 01234667777888875
No 67
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=72.75 E-value=41 Score=29.89 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=24.3
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |++ |.-|+++|....+.|.+++++-+.
T Consensus 32 gk~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 32 GKRALIT-GAS-TGIGKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp TCEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344555 543 688999999988999987777653
No 68
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=72.51 E-value=36 Score=29.96 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=23.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
+++..|+ +|.-|.++|....+.|.+++++.+.
T Consensus 31 ~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 31 NVLITGA-SKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4443454 4688999999999999988777653
No 69
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=72.30 E-value=42 Score=30.22 Aligned_cols=148 Identities=14% Similarity=0.078 Sum_probs=76.9
Q ss_pred HHHHH-HcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcC---------CCCCcc--hhHHHHHhCCC-E
Q 019410 113 MADAV-AQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVD---------QDPGLI--GNLLVERLVGA-H 179 (341)
Q Consensus 113 l~~A~-~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~---------~~~~~~--gn~~~~~~~GA-e 179 (341)
+.+.. +.+.+.|| |...+....+++-.+...+++++.+......... .+.... .-.+.+...|. +
T Consensus 64 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 141 (358)
T 3hut_A 64 ARAFVDDPRVVGVL--GDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTS 141 (358)
T ss_dssp HHHHHHCTTEEEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCE
T ss_pred HHHHhccCCcEEEE--cCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCE
Confidence 44444 55666666 3445667778888899999998775322110000 000001 11333344575 4
Q ss_pred EEEEC-CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCC
Q 019410 180 IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 255 (341)
Q Consensus 180 V~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vG 255 (341)
|.++. ...|. ....+.+.+.+++.|-.. ..++.+..+ +.....+|.+ ..+|.||++ +
T Consensus 142 ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~--------~~~d~i~~~-~ 202 (358)
T 3hut_A 142 VAVIGVTTDWG----LSSAQAFRKAFELRGGAVVVNEEVPPGNRR------FDDVIDEIED--------EAPQAIYLA-M 202 (358)
T ss_dssp EEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCCC------CHHHHHHHHH--------HCCSEEEEE-S
T ss_pred EEEEecCcHHH----HHHHHHHHHHHHHcCCEEEEEEecCCCCcc------HHHHHHHHHh--------cCCCEEEEc-c
Confidence 54443 22221 123344455555544211 122322221 1122233332 258888875 5
Q ss_pred chhHHHHHHHHHhcCCCCCeEEEEee
Q 019410 256 SGGTIAGLSLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 256 tGGt~aGl~~~~k~~~~~~rVigVe~ 281 (341)
.+..+.++...++..+.++.+++...
T Consensus 203 ~~~~a~~~~~~~~~~g~~~p~~~~~~ 228 (358)
T 3hut_A 203 AYEDAAPFLRALRARGSALPVYGSSA 228 (358)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEECGG
T ss_pred CchHHHHHHHHHHHcCCCCcEEecCc
Confidence 66688899999999998888887653
No 70
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=72.29 E-value=49 Score=28.78 Aligned_cols=34 Identities=9% Similarity=-0.059 Sum_probs=26.9
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCC----CCCeEEEEe
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFS 280 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~----~~~rVigVe 280 (341)
.++|+||+. +...+.|+..+++..+ .++.|+|++
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 468999964 6678889999999876 367788875
No 71
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=72.13 E-value=21 Score=34.47 Aligned_cols=50 Identities=8% Similarity=-0.037 Sum_probs=36.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++||.+|. |..|+.+|......|++++++-.+ ..++..++..|..++.-+
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d-----------~~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHD-----------PDHIETLRKFGMKVFYGD 54 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEECC-----------HHHHHHHHHTTCCCEESC
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCCEEEEECC-----------HHHHHHHHhCCCeEEEcC
Confidence 34555675 899999999999999998887432 124777788888776544
No 72
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=71.63 E-value=39 Score=29.91 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=23.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|--|.++|..-.+.|.++++..+
T Consensus 30 ~vlVT-Ga-s~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 30 IALVT-GA-SRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34444 54 468899999999999998877665
No 73
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=71.62 E-value=53 Score=28.94 Aligned_cols=33 Identities=30% Similarity=0.294 Sum_probs=24.5
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
...||| |++ |--|.++|....+.|.+++++-+.
T Consensus 11 k~~lVT-Gas-~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALIT-GGA-RGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEe-CCC-chHHHHHHHHHHHCCCeEEEEeCC
Confidence 344555 544 678999999999999997777654
No 74
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=71.60 E-value=52 Score=28.87 Aligned_cols=33 Identities=24% Similarity=0.208 Sum_probs=24.5
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
...||| |++ |--|.++|..-...|.+++++-+.
T Consensus 11 k~vlVT-Gas-~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVT-GGA-RGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEe-CCC-ChHHHHHHHHHHHCCCeEEEEccc
Confidence 344555 544 688999999999999998777654
No 75
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=71.55 E-value=40 Score=29.82 Aligned_cols=57 Identities=11% Similarity=-0.056 Sum_probs=34.2
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
|...||| |+ +|--|+++|..-.+.|.++++......... ..-...++..|.++..+.
T Consensus 27 ~k~~lVT-Ga-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 83 (267)
T 3u5t_A 27 NKVAIVT-GA-SRGIGAAIAARLASDGFTVVINYAGKAAAA------EEVAGKIEAAGGKALTAQ 83 (267)
T ss_dssp CCEEEEE-SC-SSHHHHHHHHHHHHHTCEEEEEESSCSHHH------HHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHHhcCCeEEEEE
Confidence 4445565 54 468899999999999998877654332100 111334455666665554
No 76
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=71.27 E-value=60 Score=29.42 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=23.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+ +|--|.++|..-.+.|.+++++-..
T Consensus 48 ~~lVT-Ga-s~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 48 VAFIT-GA-ARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp EEEES-SC-SSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCeEEEEecc
Confidence 34454 54 4688999999999999998887554
No 77
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=70.48 E-value=59 Score=29.03 Aligned_cols=55 Identities=15% Similarity=-0.023 Sum_probs=33.6
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
|...||| ||+ +.-|+++|..-++.|.+++++-+.... ...+..++..|.++..+.
T Consensus 7 gKvalVT-Gas-~GIG~aia~~la~~Ga~Vv~~~r~~~~--------~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 7 DKVVIVT-GGA-SGIGGAISMRLAEERAIPVVFARHAPD--------GAFLDALAQRQPRATYLP 61 (258)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESSCCC--------HHHHHHHHHHCTTCEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHcCCEEEEEECCccc--------HHHHHHHHhcCCCEEEEE
Confidence 3444566 544 578999999999999988877654321 122444555565554443
No 78
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=70.44 E-value=41 Score=29.32 Aligned_cols=79 Identities=16% Similarity=0.055 Sum_probs=53.8
Q ss_pred hHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC-CCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 104 NKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 104 nK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~-~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
|=..-++..++.|.+.|.+.||.+ |++|-++..++-.. .|++.++|.-.. .....+..-.....+.++..|.+|+.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVA-S~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t 103 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVA-SSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVR 103 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEE-eCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEE
Confidence 445667788899999999999876 57788876665533 788888887321 11001111124578899999999988
Q ss_pred ECC
Q 019410 183 ISK 185 (341)
Q Consensus 183 v~~ 185 (341)
...
T Consensus 104 ~tH 106 (201)
T 1vp8_A 104 QSH 106 (201)
T ss_dssp CCC
T ss_pred Eec
Confidence 764
No 79
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=70.27 E-value=60 Score=28.99 Aligned_cols=162 Identities=13% Similarity=0.079 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-----c-CCCCCcchh---HHHHHh--C
Q 019410 108 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----V-DQDPGLIGN---LLVERL--V 176 (341)
Q Consensus 108 kl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-----~-~~~~~~~gn---~~~~~~--~ 176 (341)
+....++.++.++.+.||... ..++....+...++..|++++.+-+..... . ..+....+. ..+++. .
T Consensus 48 ~q~~~i~~li~~~vdgiii~~-~~~~~~~~~~~~a~~~gipvV~~d~~~~~~~~~~~v~~~D~~~~g~~~~~~L~~~~~~ 126 (316)
T 1tjy_A 48 GQVQLVNNFVNQGYDAIIVSA-VSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDK 126 (316)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-SSSSTTHHHHHHHHHTTCEEEEESSCCCGGGCSEEEESCCHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHCcCEEEEecCCCCCCCceEEEecCCHHHHHHHHHHHHHHHcCC
Confidence 334456777788999988643 333332344455677899988874321100 0 000000111 112222 2
Q ss_pred CC-EEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCC
Q 019410 177 GA-HIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 255 (341)
Q Consensus 177 GA-eV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vG 255 (341)
|- +|.++....-.. ....+.+-..+.+++.++..-++.....+.....++ ....+++.+- .++|+||++
T Consensus 127 g~~~i~~i~g~~~~~-~~~~r~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~------~~~~aI~~~-- 196 (316)
T 1tjy_A 127 EKAKVAFFYSSPTVT-DQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSL-QTAEGIIKAY------PDLDAIIAP-- 196 (316)
T ss_dssp SSEEEEEEESCSSCH-HHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHH-HHHHHHHHHC------SSCCEEEEC--
T ss_pred CCCEEEEEEcCCCCh-hHHHHHHHHHHHHHhhCCCcEEEEeccCCCCHHHHH-HHHHHHHHhC------CCCCEEEEC--
Confidence 33 565554321100 011222333444444332322222111111112233 2344554432 368999975
Q ss_pred chhHHHHHHHHHhcCC-CCCeEEEEe
Q 019410 256 SGGTIAGLSLGSWLGT-LKAKVHAFS 280 (341)
Q Consensus 256 tGGt~aGl~~~~k~~~-~~~rVigVe 280 (341)
+..++.|+..+++..+ .++.|+|++
T Consensus 197 nD~~A~g~~~al~~~G~~dv~VvG~D 222 (316)
T 1tjy_A 197 DANALPAAAQAAENLKRNNLAIVGFS 222 (316)
T ss_dssp STTHHHHHHHHHHHTTCCSCEEEEBC
T ss_pred CCccHHHHHHHHHHcCCCCEEEEEeC
Confidence 4567889999999887 457787764
No 80
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=70.16 E-value=37 Score=29.87 Aligned_cols=55 Identities=16% Similarity=0.048 Sum_probs=33.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
..||| |+ ++--|.++|..-.+.|.++++........ ...-...++..|.++..+.
T Consensus 20 ~~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 74 (270)
T 3is3_A 20 VALVT-GS-GRGIGAAVAVHLGRLGAKVVVNYANSTKD------AEKVVSEIKALGSDAIAIK 74 (270)
T ss_dssp EEEES-CT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCCCHHH------HHHHHHHHHhcCCcEEEEE
Confidence 34454 54 46889999999999999888765433210 0112344556677766664
No 81
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=69.27 E-value=39 Score=29.14 Aligned_cols=31 Identities=19% Similarity=-0.018 Sum_probs=22.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..+|| |+ +|.-|.++|..-.+.|.+++++-+
T Consensus 11 ~vlIT-Ga-s~giG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 11 VGIVT-GS-GGGIGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEcC
Confidence 34555 54 468899999998889988766644
No 82
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=69.23 E-value=48 Score=28.61 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=22.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
.||| |+ +|--|.++|....+.|.+++++...
T Consensus 7 ~lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 7 ALVT-GA-SRGIGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3454 54 4688999999999999988776553
No 83
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=69.15 E-value=61 Score=28.77 Aligned_cols=31 Identities=23% Similarity=0.084 Sum_probs=22.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |++ |--|.++|..-...|.+++++-.
T Consensus 31 ~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 31 VAIVT-GGR-RGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-cCC-CHHHHHHHHHHHHCCCeEEEEeC
Confidence 34555 543 67888888888888888777653
No 84
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=68.91 E-value=58 Score=28.97 Aligned_cols=29 Identities=17% Similarity=0.068 Sum_probs=22.1
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
||| ||+ +.-|+++|..-.+.|.++++.-.
T Consensus 6 lVT-Gas-~GIG~aia~~la~~Ga~V~~~~~ 34 (247)
T 3ged_A 6 IVT-GGG-HGIGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp EEE-STT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEe-cCC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 455 544 67899999999999998777643
No 85
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=68.69 E-value=51 Score=28.82 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=23.6
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
...||| |++ |--|.++|..-...|.+++++.+.
T Consensus 9 k~vlVT-Gas-~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 9 RTIVVA-GAG-RDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEE-CCC-chHHHHHHHHHHHCCCEEEEEcCC
Confidence 344555 544 678999999988999987776543
No 86
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=68.63 E-value=66 Score=28.85 Aligned_cols=32 Identities=22% Similarity=0.087 Sum_probs=23.2
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |++ |.-|.++|....+.|.+++++-+
T Consensus 32 k~vlVT-Gas-~gIG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 32 RAAVVT-GGA-SGIGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 344555 544 68899999999999988776654
No 87
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=68.38 E-value=6.9 Score=33.87 Aligned_cols=66 Identities=20% Similarity=0.189 Sum_probs=44.3
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++|+-+.......+ .....+..|+..|++|+.++
T Consensus 122 ~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~tt~ 187 (204)
T 3hu5_A 122 RRRGVDTLLVSGTQYPNCIRGTAVDAFALDYDVVVVTDACSARTPG--VAESNINDMRAMGITCVPLT 187 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEECGG
T ss_pred HhCCCCeEEEeeeccchHHHHHHHHHHHCCCEEEEehhhhCCCCHH--HHHHHHHHHHHhCCEEEEHH
Confidence 4578999998764443444678889999999999998754432111 01234677788899886543
No 88
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=68.10 E-value=50 Score=28.87 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
|...||| |+ +|--|+++|..-.+.|.++++........ .......++..|.++..+.
T Consensus 4 ~k~vlVT-Ga-s~gIG~aia~~l~~~G~~vv~~~~r~~~~------~~~~~~~~~~~~~~~~~~~ 60 (258)
T 3oid_A 4 NKCALVT-GS-SRGVGKAAAIRLAENGYNIVINYARSKKA------ALETAEEIEKLGVKVLVVK 60 (258)
T ss_dssp CCEEEES-SC-SSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEe-cC-CchHHHHHHHHHHHCCCEEEEEcCCCHHH------HHHHHHHHHhcCCcEEEEE
Confidence 3334554 54 46889999999889999887764322210 0112334455666665554
No 89
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=67.91 E-value=63 Score=28.34 Aligned_cols=156 Identities=9% Similarity=-0.013 Sum_probs=75.0
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcC-CCCC------cchh--HHHHHhCCC-E
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVD-QDPG------LIGN--LLVERLVGA-H 179 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~-~~~~------~~gn--~~~~~~~GA-e 179 (341)
..++.....++.+.||..+... +. .+...++..|++++++-..... .. ..+. ..+. .+.+...|- +
T Consensus 58 ~~~~~~l~~~~vdGiI~~~~~~-~~--~~~~~l~~~~iPvV~i~~~~~~-~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~ 133 (295)
T 3hcw_A 58 DEVYKMIKQRMVDAFILLYSKE-ND--PIKQMLIDESMPFIVIGKPTSD-IDHQFTHIDNDNILASENLTRHVIEQGVDE 133 (295)
T ss_dssp HHHHHHHHTTCCSEEEESCCCT-TC--HHHHHHHHTTCCEEEESCCCSS-GGGGSCEEEECHHHHHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHhCCcCEEEEcCccc-Ch--HHHHHHHhCCCCEEEECCCCcc-ccCCceEEecCcHHHHHHHHHHHHHcCCcc
Confidence 3455666667788888654322 21 3334456678887776432211 00 0000 0011 112222353 4
Q ss_pred EEEECCc-cccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchh
Q 019410 180 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 258 (341)
Q Consensus 180 V~~v~~~-~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGG 258 (341)
|.++... ... ....+.+.+.+.+++.+-...++. +..+.. .|+ ....+++++... ...+|+||+ .+..
T Consensus 134 I~~i~~~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~-~~~~~~--~~~-~~~~~~l~~~~~---~~~~~ai~~--~~d~ 202 (295)
T 3hcw_A 134 LIFITEKGNFE--VSKDRIQGFETVASQFNLDYQIIE-TSNERE--VIL-NYMQNLHTRLKD---PNIKQAIIS--LDAM 202 (295)
T ss_dssp EEEEEESSCCH--HHHHHHHHHHHHHHHTTCEEEEEE-ECSCHH--HHH-HHHHHHHHHHTC---TTSCEEEEE--SSHH
T ss_pred EEEEcCCccch--hHHHHHHHHHHHHHHcCCCeeEEe-ccCCHH--HHH-HHHHHHHhhccc---CCCCcEEEE--CChH
Confidence 5444321 111 011223334444555442211221 111221 233 345566665431 136899886 5678
Q ss_pred HHHHHHHHHhcCCC----CCeEEEEe
Q 019410 259 TIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 259 t~aGl~~~~k~~~~----~~rVigVe 280 (341)
++.|+..++++.+. ++.|+|++
T Consensus 203 ~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 203 LHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp HHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 89999999998873 56788876
No 90
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=67.41 E-value=14 Score=31.10 Aligned_cols=64 Identities=22% Similarity=0.170 Sum_probs=44.1
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHh-CCCEEEEECC
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIELISK 185 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~-~GAeV~~v~~ 185 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++++.+...+ .+.. ... ..|+. +|++|+..+.
T Consensus 106 ~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as--~~~~--~~a-~~m~~~~ga~v~~~~~ 170 (182)
T 3eef_A 106 RANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAA--RIDP--NWK-DYFTRVYGATVKRSDE 170 (182)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEC--SSCT--THH-HHHHHHHCCEEECTTC
T ss_pred HhcCCCeEEEEEeccCHHHHHHHHHHHHCCCEEEEehhhcCC--HHHH--HHH-HHHHHhcCcEEeEHHH
Confidence 456899999876544444468899999999999999875443 2211 223 67777 7998876553
No 91
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=67.34 E-value=33 Score=30.22 Aligned_cols=58 Identities=19% Similarity=0.054 Sum_probs=32.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
..||| |++ +--|.++|..-.+.|.+++++.+....... ...-...++..|.++..+.-
T Consensus 13 ~vlVT-Gas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 70 (262)
T 3ksu_A 13 VIVIA-GGI-KNLGALTAKTFALESVNLVLHYHQAKDSDT----ANKLKDELEDQGAKVALYQS 70 (262)
T ss_dssp EEEEE-TCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHH----HHHHHHHHHTTTCEEEEEEC
T ss_pred EEEEE-CCC-chHHHHHHHHHHHCCCEEEEEecCccCHHH----HHHHHHHHHhcCCcEEEEEC
Confidence 34555 554 578899998888899987776543221000 01113334455777766643
No 92
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.88 E-value=65 Score=28.13 Aligned_cols=32 Identities=19% Similarity=0.035 Sum_probs=22.5
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |++ +--|.++|..-.+.|.+++++-+
T Consensus 12 k~vlVT-Gas-~gIG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 12 KVVVIS-GVG-PALGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp CEEEEE-SCC-TTHHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEE-CCC-cHHHHHHHHHHHHCcCEEEEEeC
Confidence 344555 543 67899999888888888766644
No 93
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=66.77 E-value=9 Score=36.17 Aligned_cols=62 Identities=11% Similarity=-0.032 Sum_probs=42.8
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
..++..+...|.+.+| .|+..|.-|.+.+..|+.+|.+++++.+. ..++..++.+||+.++.
T Consensus 161 ~~~~~~~~~~g~~vlV-~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~~~ 222 (379)
T 3iup_A 161 LGMVETMRLEGHSALV-HTAAASNLGQMLNQICLKDGIKLVNIVRK-----------QEQADLLKAQGAVHVCN 222 (379)
T ss_dssp HHHHHHHHHTTCSCEE-ESSTTSHHHHHHHHHHHHHTCCEEEEESS-----------HHHHHHHHHTTCSCEEE
T ss_pred HHHHHHhccCCCEEEE-ECCCCCHHHHHHHHHHHHCCCEEEEEECC-----------HHHHHHHHhCCCcEEEe
Confidence 3455555555655555 44234789999999999999986666532 23688889999985543
No 94
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=66.58 E-value=18 Score=30.51 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=44.5
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccch
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVS 315 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~ 315 (341)
.++.||+.+|.-+.+.|+..++- ...||||.+.+....+.. +.++++ +.+++. +++|.++.
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~d-LlS~vq-mp~Gvp---Vatv~~~~ 118 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGFV----KGATIACPPPSDSFAGAD-IYSSLR-MPSGIS---PALVLEPK 118 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHHS----SSCEEECCCCCCGGGGTH-HHHHHC-CCTTCC---CEECCSHH
T ss_pred CCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCc---eEEecCch
Confidence 48999999999999999998874 468999998865544455 777776 555665 45553333
No 95
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=66.33 E-value=62 Score=27.84 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=22.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.+|| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 7 vlVT-Ga-s~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 7 ALVT-GA-SRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444 54 478999999998889988777665
No 96
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=66.31 E-value=9.9 Score=33.33 Aligned_cols=64 Identities=14% Similarity=0.059 Sum_probs=43.2
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHh-CCCEEEEE
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIELI 183 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~-~GAeV~~v 183 (341)
++.|.++|+.+|-. .+.| .+.|.-|..+|++++++.+.......+ .....+..|+. +|+.|+..
T Consensus 139 ~~~gi~~lvi~G~~-T~~CV~~Ta~~a~~~Gy~v~vv~Da~~~~~~~--~h~~aL~~m~~~~G~~i~ts 204 (211)
T 3o94_A 139 RERRVSTVILTGVL-TDISVLHTAIDAYNLGYDIEIVKPAVASIWPE--NHQFALGHFKNTLGAKLVDE 204 (211)
T ss_dssp HHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTSCCEEECT
T ss_pred HhCCCCeEEEEeec-cChHHHHHHHHHHHCCCEEEEechhhcCCCHH--HHHHHHHHHHHHCCcEEech
Confidence 45689999987644 4555 578889999999999987754432111 01234677887 89887643
No 97
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=66.28 E-value=16 Score=33.55 Aligned_cols=51 Identities=22% Similarity=0.171 Sum_probs=39.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++|+..|+ |--|...+..|+.+|.+.++++.... .++.+++.+||+.++-.
T Consensus 162 ~~VlV~Ga--G~vG~~aiq~ak~~G~~~vi~~~~~~----------~k~~~a~~lGa~~~i~~ 212 (346)
T 4a2c_A 162 KNVIIIGA--GTIGLLAIQCAVALGAKSVTAIDISS----------EKLALAKSFGAMQTFNS 212 (346)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESCH----------HHHHHHHHTTCSEEEET
T ss_pred CEEEEECC--CCcchHHHHHHHHcCCcEEEEEechH----------HHHHHHHHcCCeEEEeC
Confidence 56665664 67899999999999999888876432 36889999999866544
No 98
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=65.56 E-value=69 Score=27.95 Aligned_cols=33 Identities=9% Similarity=0.058 Sum_probs=27.0
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCC-CCeEEEEe
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTL-KAKVHAFS 280 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~-~~rVigVe 280 (341)
.+|+||+ .+..++.|+..+++..+. ++.|+|++
T Consensus 203 ~~~ai~~--~~d~~a~g~~~al~~~g~~di~vig~d 236 (309)
T 2fvy_A 203 KIEVVIA--NNDAMAMGAVEALKAHNKSSIPVFGVD 236 (309)
T ss_dssp GCCEEEE--SSHHHHHHHHHHHHHTTCTTSCEECSB
T ss_pred CccEEEE--CCchhHHHHHHHHHHcCCCCceEEecC
Confidence 5899987 466788999999999887 78888754
No 99
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=65.52 E-value=61 Score=28.27 Aligned_cols=55 Identities=16% Similarity=0.059 Sum_probs=32.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
..||| |+ +|--|.++|....+.|.++++........ .......++..|.++..+.
T Consensus 28 ~vlVT-Ga-s~gIG~~la~~l~~~G~~v~i~~~r~~~~------~~~~~~~l~~~~~~~~~~~ 82 (267)
T 4iiu_A 28 SVLVT-GA-SKGIGRAIARQLAADGFNIGVHYHRDAAG------AQETLNAIVANGGNGRLLS 82 (267)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCCchHH------HHHHHHHHHhcCCceEEEE
Confidence 34444 54 46889999999999999887766433210 0112344455565655554
No 100
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=65.49 E-value=65 Score=28.75 Aligned_cols=57 Identities=18% Similarity=0.105 Sum_probs=34.5
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
...||| |+ +|--|.++|..-.+.|.+++++.+..... .......++..|.+++.+.-
T Consensus 48 k~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~ 104 (291)
T 3ijr_A 48 KNVLIT-GG-DSGIGRAVSIAFAKEGANIAIAYLDEEGD------ANETKQYVEKEGVKCVLLPG 104 (291)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHTTTCCEEEEES
T ss_pred CEEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCCchHH------HHHHHHHHHhcCCcEEEEEC
Confidence 344555 54 46789999999999999877776543210 01113344556777666543
No 101
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=65.38 E-value=17 Score=34.36 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=35.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..| + |--|...+..|+.+|.+.++.+... ..++++++.+||+++
T Consensus 187 ~~VlV~G-a-G~vG~~aiqlAk~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 187 STVYVAG-A-GPVGLAAAASARLLGAAVVIVGDLN----------PARLAHAKAQGFEIA 234 (398)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEEESC----------HHHHHHHHHTTCEEE
T ss_pred CEEEEEC-C-cHHHHHHHHHHHHCCCCeEEEEcCC----------HHHHHHHHHcCCcEE
Confidence 5565566 3 7899999999999999655555332 236888899999843
No 102
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=65.13 E-value=81 Score=28.77 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=24.4
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
+++..|+ +|--|.++|......|.++++.++.
T Consensus 7 ~vlVTGa-s~GIG~aia~~L~~~G~~V~~~~r~ 38 (324)
T 3u9l_A 7 IILITGA-SSGFGRLTAEALAGAGHRVYASMRD 38 (324)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEecCc
Confidence 3433454 4789999999999999998888765
No 103
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=64.93 E-value=65 Score=27.66 Aligned_cols=31 Identities=23% Similarity=0.128 Sum_probs=23.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..+|| |+ +|.-|.++|......|.+++++.+
T Consensus 15 ~vlIt-Ga-sggiG~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 15 VAIVT-GG-AQNIGLACVTALAEAGARVIIADL 45 (260)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 34455 54 478999999999989988777654
No 104
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=64.82 E-value=48 Score=29.10 Aligned_cols=56 Identities=11% Similarity=0.012 Sum_probs=33.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|+ +|.-|.++|....+.|.++++........ .......++..|.++..+.-
T Consensus 28 ~vlITGa-s~gIG~a~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 83 (272)
T 4e3z_A 28 VVLVTGG-SRGIGAAVCRLAARQGWRVGVNYAANREA------ADAVVAAITESGGEAVAIPG 83 (272)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCChhH------HHHHHHHHHhcCCcEEEEEc
Confidence 3443454 47899999999999999877664432210 01113344556777766643
No 105
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=64.71 E-value=49 Score=28.89 Aligned_cols=31 Identities=19% Similarity=0.056 Sum_probs=22.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 14 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 44 (256)
T 3gaf_A 14 VAIVT-GA-AAGIGRAIAGTFAKAGASVVVTDL 44 (256)
T ss_dssp EEEEC-SC-SSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34554 54 467899999888888988766654
No 106
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=63.65 E-value=9.6 Score=33.95 Aligned_cols=36 Identities=22% Similarity=0.122 Sum_probs=28.9
Q ss_pred CCCeEEEeCC--------------CcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGG--------------IQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~--------------s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...+||.|+ |+|-.|.++|.++...|.+++++...
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4556778664 37899999999999999999887543
No 107
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=63.55 E-value=59 Score=27.72 Aligned_cols=85 Identities=12% Similarity=0.111 Sum_probs=52.9
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEe
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNI 311 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v 311 (341)
.|+.++..+ ..++.||+.+|.-+.+.|+..++- ...||||.+..........+..+.+ +-.++.+ -+|
T Consensus 57 ~~~~~~a~~----~g~~ViIa~AG~aahLpgvvA~~t----~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpv---atv 124 (173)
T 4grd_A 57 FDYAEKARE----RGLRAIIAGAGGAAHLPGMLAAKT----TVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPV---ATF 124 (173)
T ss_dssp HHHHHHHTT----TTCSEEEEEEESSCCHHHHHHHHC----CSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCC---EEC
T ss_pred HHHHHHHHh----cCCeEEEEeccccccchhhheecC----CCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCc---eEE
Confidence 455555542 358899999999999999998874 4689999988765555555555553 4444442 222
Q ss_pred ccc-hHHHHHHHHHHHHH
Q 019410 312 QNV-SVYMTFKNILMNIL 328 (341)
Q Consensus 312 ~d~-~~~~~~~~~~~~~~ 328 (341)
.-+ .+-.+.-.+|..||
T Consensus 125 ~i~~~~a~NAallA~~IL 142 (173)
T 4grd_A 125 AIGEAGAANAALFAVSIL 142 (173)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred ecCCcchHHHHHHHHHHH
Confidence 222 33344445555554
No 108
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=63.45 E-value=7.2 Score=35.60 Aligned_cols=47 Identities=9% Similarity=-0.056 Sum_probs=35.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+++.+. .. .+...++.+||+.++
T Consensus 144 ~~VlV~Ga--G~vG~~a~qlak~~Ga~Vi~~~-~~-----------~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 144 REVLIVGF--GAVNNLLTQMLNNAGYVVDLVS-AS-----------LSQALAAKRGVRHLY 190 (315)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEC-SS-----------CCHHHHHHHTEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEE-Ch-----------hhHHHHHHcCCCEEE
Confidence 56666665 8999999999999999766654 21 147788999998665
No 109
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.34 E-value=12 Score=34.75 Aligned_cols=48 Identities=17% Similarity=0.155 Sum_probs=34.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|..++..|+.+|.+++++.+.. .++..++.+||+.++
T Consensus 181 ~~VlV~Ga--G~vG~~~~qlak~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 181 KKVGIVGL--GGIGSMGTLISKAMGAETYVISRSS-----------RKREDAMKMGADHYI 228 (360)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEESSS-----------TTHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEcCCH-----------HHHHHHHHcCCCEEE
Confidence 56666665 7899999999999999855544322 146778889997554
No 110
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=62.92 E-value=53 Score=31.72 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=59.1
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHH-HcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHHHH
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAK-YLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTN 198 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~-~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~~~ 198 (341)
|.++++..|+| +..|+|.|.+.+ ..|-..+++..+..+..+. .| ...|.. ..
T Consensus 49 ~pK~vLVtGaS-sGiGlA~AialAf~~GA~vi~v~~~~~~~~~~-------------~a-------tag~~~------~~ 101 (401)
T 4ggo_A 49 APKNVLVLGCS-NGYGLASRITAAFGYGAATIGVSFEKAGSETK-------------YG-------TPGWYN------NL 101 (401)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHHHCCEEEEEECCCCCCSSS-------------CC-------CHHHHH------HH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHhhCCCCEEEEecCCcccccc-------------cc-------cccchh------HH
Confidence 34554444554 678888887766 6788888777655432110 00 001111 12
Q ss_pred HHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCch
Q 019410 199 ILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 257 (341)
Q Consensus 199 ~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtG 257 (341)
...+..++.|.....++.+-.++.... .+..+|.+++ +.+|.+|-+++.+
T Consensus 102 a~~~~i~~~G~~a~~i~~Dv~d~e~i~---~vi~~i~~~~------G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 102 AFDEAAKREGLYSVTIDGDAFSDEIKA---QVIEEAKKKG------IKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHTCCEEEEESCTTSHHHHH---HHHHHHHHTT------CCEEEEEECCCCS
T ss_pred HHHHHHHHcCCCceeEeCCCCCHHHHH---HHHHHHHHhc------CCCCEEEEecccc
Confidence 334455666767777877666665433 3445555543 4799999999976
No 111
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=62.89 E-value=79 Score=27.68 Aligned_cols=33 Identities=24% Similarity=0.123 Sum_probs=24.4
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
...||| |+ +|--|.++|..-.+.|.+++++-+.
T Consensus 14 k~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 14 KVAFIT-GA-ARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CEEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEE-CC-CChHHHHHHHHHHHCCCeEEEEecc
Confidence 344555 54 4688999999999999998777554
No 112
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=62.44 E-value=54 Score=29.23 Aligned_cols=33 Identities=27% Similarity=0.191 Sum_probs=22.8
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+...||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 28 ~k~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 28 SPVALIT-GA-GSGIGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CCEEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3344555 54 367888988888888887776654
No 113
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=61.99 E-value=77 Score=27.94 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=23.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
.||| |+ +|--|+++|....+.|.+++++.+.
T Consensus 32 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 62 (283)
T 1g0o_A 32 ALVT-GA-GRGIGREMAMELGRRGCKVIVNYAN 62 (283)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 54 4689999999999999987776654
No 114
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=61.27 E-value=11 Score=32.42 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=40.2
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++.|.++||.+| ...|.| .+.|..|..+|++++++-+.......+ .....+..++..|++|+
T Consensus 138 ~~~gi~~lvi~G-~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~~~~~~~~v~ 200 (207)
T 1nf9_A 138 RAAGRDQLVLCG-VYAHVGVLISTVDAYSNDIQPFLVADAIADFSEA--HHRMALEYAASRCAMVV 200 (207)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEE
T ss_pred HHcCCCEEEEEe-eecChHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHhCcEEc
Confidence 457899999776 445655 578889999999999987754432110 01223555666677765
No 115
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=61.25 E-value=67 Score=29.03 Aligned_cols=33 Identities=24% Similarity=0.118 Sum_probs=23.8
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|...||| ||+ +.-|+++|..-++.|.++++.-+
T Consensus 29 gKvalVT-Gas-~GIG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 29 AKIAVIT-GAT-SGIGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TCEEEEE-SCS-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEe-CcC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 4445666 544 57899999999999988776644
No 116
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=61.19 E-value=9.4 Score=35.21 Aligned_cols=50 Identities=16% Similarity=0.152 Sum_probs=36.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++|+..|+ |.-|.+++..|+.+|.+++++.+. ..++..++.+||+.++-.
T Consensus 168 ~~VlV~Ga--G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 168 QWVVISGI--GGLGHVAVQYARAMGLRVAAVDID-----------DAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp SEEEEECC--STTHHHHHHHHHHTTCEEEEEESC-----------HHHHHHHHHTTCSEEEET
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEeCC-----------HHHHHHHHHcCCCEEEeC
Confidence 45555554 678999999999999976655432 236888999999866543
No 117
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=60.96 E-value=91 Score=27.78 Aligned_cols=32 Identities=31% Similarity=0.324 Sum_probs=22.1
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |+ +|--|.++|..-.+.|.+++++.+
T Consensus 50 k~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~~~ 81 (294)
T 3r3s_A 50 RKALVT-GG-DSGIGRAAAIAYAREGADVAINYL 81 (294)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 344555 54 367888888888888888666543
No 118
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=60.82 E-value=86 Score=27.42 Aligned_cols=36 Identities=14% Similarity=-0.000 Sum_probs=28.5
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEeeC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 282 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~~ 282 (341)
.++|+||+ .+..++.|+..++++.|. ++.|+|++-.
T Consensus 186 ~~~~ai~~--~nd~~A~g~~~al~~~G~~vP~di~vig~D~~ 225 (294)
T 3qk7_A 186 VPPTAIIT--DCNMLGDGVASALDKAGLLGGEGISLIAYDGL 225 (294)
T ss_dssp SCCSEEEE--SSHHHHHHHHHHHHHTTCSSTTSCEEEEETCS
T ss_pred CCCcEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEeecCc
Confidence 46999997 467888999999998773 6789987743
No 119
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=60.08 E-value=76 Score=27.74 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=21.7
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|+++|..-.+.|.+++++..
T Consensus 28 vlIT-Ga-s~gIG~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 28 AFVT-GG-MGGLGAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp EEET-TT-TSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 3444 54 468899999888888888766653
No 120
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=60.05 E-value=84 Score=27.08 Aligned_cols=31 Identities=26% Similarity=0.157 Sum_probs=22.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 9 ~~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 9 VALIT-GA-SSGIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp EEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 34555 54 478999999988888988776654
No 121
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=59.87 E-value=73 Score=28.09 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=23.0
Q ss_pred CeEEEeCCCcch--HHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQSN--HCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~GN--hg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
..||| |++ |+ -|.++|..-.+.|.+++++-+..
T Consensus 28 ~vlVT-Gas-g~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 28 KILIT-GLL-SNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp EEEEC-CCC-STTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEEE-CCC-CCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 34454 543 45 89999999889999877766543
No 122
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=59.85 E-value=84 Score=27.02 Aligned_cols=187 Identities=11% Similarity=0.029 Sum_probs=87.4
Q ss_pred HHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCC---CC--cchh--HHHHHhCCC-EEEEEC
Q 019410 113 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD---PG--LIGN--LLVERLVGA-HIELIS 184 (341)
Q Consensus 113 l~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~---~~--~~gn--~~~~~~~GA-eV~~v~ 184 (341)
++.+.+++.+.|| .+... + -..+. . .|++++++-....+...-. .. ..+. .+.+...|. +|.++.
T Consensus 53 ~~~l~~~~vdgiI-~~~~~-~-~~~~~---~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~ 125 (280)
T 3gyb_A 53 ITSALSMRPDGII-IAQDI-P-DFTVP---D-SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIAHLR 125 (280)
T ss_dssp HHHHHTTCCSEEE-EESCC--------------CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhCCCCEEE-ecCCC-C-hhhHh---h-cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4455677899999 65432 2 22222 2 8999887754330100000 00 0111 122333464 466665
Q ss_pred CccccccCcHHHHHHHHHHHHHhCCCcE-EeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHH
Q 019410 185 KEEYSKIGSVTLTNILKEKLLKEGRRPY-VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGL 263 (341)
Q Consensus 185 ~~~~~~~~~~~~~~~~a~~l~~~g~~~~-~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl 263 (341)
..... ...+.+.+.+.+++.+.... .+..+ +.....|+ ....+++++- .++|+||+. +..++.|+
T Consensus 126 ~~~~~---~~~R~~gf~~~l~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d~~a~g~ 191 (280)
T 3gyb_A 126 VGSGA---GLRRFESFEATMRAHGLEPLSNDYLG--PAVEHAGY-TETLALLKEH------PEVTAIFSS--NDITAIGA 191 (280)
T ss_dssp CSSHH---HHHHHHHHHHHHHHTTCCCEECCCCS--CCCHHHHH-HHHHHHHHHC------TTCCEEEES--SHHHHHHH
T ss_pred CCCch---HHHHHHHHHHHHHHcCcCCCcccccC--CCCHHHHH-HHHHHHHhCC------CCCCEEEEC--ChHHHHHH
Confidence 43211 12233444445555442222 11111 11122243 3445555442 368999874 56788899
Q ss_pred HHHHhcCC----CCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccchHHHHHHHHHHHHHhcCCCC
Q 019410 264 SLGSWLGT----LKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMNGKQP 334 (341)
Q Consensus 264 ~~~~k~~~----~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~~~~~~~~~~~~~~~~~~~~ 334 (341)
..++++.+ .++.|+|++-.. +..-..+.+ ..|...-.+.....-.++.+.+.+|+.+
T Consensus 192 ~~al~~~g~~vP~di~vvg~d~~~-----------~~~~~~p~l---ttv~~~~~~~g~~av~~l~~~i~~g~~~ 252 (280)
T 3gyb_A 192 LGAARELGLRVPEDLSIIGYDNTP-----------LAQTRLINL---TTIDDNSIGVGYNAALLLLSMLDPEAPH 252 (280)
T ss_dssp HHHHHHHTCCTTTTCEEEEESCCH-----------HHHSTTTCC---CEEECCHHHHHHHHHHHHHHHHCTTSCC
T ss_pred HHHHHHcCCCCCCeeEEEEECCch-----------HhhccCCCc---eEEecCHHHHHHHHHHHHHHHHhcCCCC
Confidence 99998876 367888876321 111122222 2344443444455555566666635544
No 123
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=59.74 E-value=83 Score=26.93 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=26.5
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEee
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 281 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~ 281 (341)
.++|+|| +.+...+.|+..+++..+. ++.|+|++-
T Consensus 179 ~~~~ai~--~~~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 217 (276)
T 2h0a_A 179 SPPLNVF--AGADQVALGVLEEAVRLGLTPGRDVRVLGFDG 217 (276)
T ss_dssp CSSEEEE--CSSHHHHHHHHHHHHTTSCTTTTSEEEEEESC
T ss_pred CCCCEEE--ECCcHHHHHHHHHHHHcCCCCCCCeEEEEeCC
Confidence 3588888 4677889999999998774 456777653
No 124
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=59.71 E-value=11 Score=33.18 Aligned_cols=65 Identities=12% Similarity=-0.014 Sum_probs=42.8
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++++.+.......+ .....+..|+..|+.|+.+
T Consensus 134 ~~~gi~~lii~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~--~h~~aL~~~~~~~a~v~tt 198 (223)
T 3tg2_A 134 RETGRDQLIITGVYAHIGILSTALDAFMFDIQPFVIGDGVADFSLS--DHEFSLRYISGRTGAVKST 198 (223)
T ss_dssp HHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEECH
T ss_pred HhcCcCceEEeecccChHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHcCCEEecH
Confidence 4568999998764443344588999999999999998754432111 0123466667778877543
No 125
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=59.45 E-value=21 Score=33.49 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=35.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+.+..|+.+|.+-++++... ..+..+++.+||+.++
T Consensus 184 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi 232 (370)
T 4ej6_A 184 STVAILGG--GVIGLLTVQLARLAGATTVILSTRQ----------ATKRRLAEEVGATATV 232 (370)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSC----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHcCCCEEE
Confidence 55555664 7899999999999999655555432 2367888999997554
No 126
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=59.28 E-value=14 Score=32.91 Aligned_cols=64 Identities=17% Similarity=0.141 Sum_probs=43.1
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++.|.++||.+|- ..|.| .+.|.-|..+|++++|+.+...+...+ .....+..|+..|++|+.+
T Consensus 155 ~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~aL~~m~~~~a~v~tt 219 (236)
T 3ot4_A 155 AQRGVQTLLVAGA-TTSGCVRASVVDAMSAGFRPLVLSDCVGDRALG--PHEANLFDMRQKYAAVMTH 219 (236)
T ss_dssp HHTTCCEEEEEES-CTTTHHHHHHHHHHHHTCEEEEEEEEECCSCHH--HHHHHHHHHHHHTSEEECH
T ss_pred HHCCCCEEEEeCc-cCcHHHHHHHHHHHHCCCEEEEechhcCCCCHH--HHHHHHHHHHhcCCEEeeH
Confidence 4568999998764 45666 488999999999999998755432111 0123466666778877643
No 127
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=59.24 E-value=93 Score=27.31 Aligned_cols=34 Identities=12% Similarity=-0.100 Sum_probs=27.4
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
.++|+||+ .+..++.|+..+++..+. ++.|+|++
T Consensus 201 ~~~~ai~~--~nd~~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 201 HMPSVIIT--SDVMLNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCCEEEE--CChHHHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 46999997 567888899999998763 67888876
No 128
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=59.12 E-value=95 Score=27.38 Aligned_cols=56 Identities=20% Similarity=0.090 Sum_probs=32.3
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
+...||| |++ |--|.++|..-.+.|.+++++-+.... .......++..|.++..+.
T Consensus 24 ~k~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 24 PQTAFVT-GVS-SGIGLAVARTLAARGIAVYGCARDAKN-------VSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp -CEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 3444555 543 678899998888889887666543211 0112334455566665554
No 129
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=59.02 E-value=98 Score=27.84 Aligned_cols=149 Identities=12% Similarity=0.067 Sum_probs=77.0
Q ss_pred HHHHHHHc-CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCc---CCC-------CC----cchhHHHHHhC
Q 019410 112 LMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV---DQD-------PG----LIGNLLVERLV 176 (341)
Q Consensus 112 ll~~A~~~-g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~---~~~-------~~----~~gn~~~~~~~ 176 (341)
.+.+...+ +.+.|| |...+....+++-.+...+++.+.......... ... +. ...-.+.+..+
T Consensus 80 ~~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 157 (386)
T 3sg0_A 80 NARKLLSEEKVDVLI--GSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKT 157 (386)
T ss_dssp HHHHHHHTSCCSEEE--CCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhcCceEEE--CCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHHHHhc
Confidence 34444454 678777 444567778888899999999887643211000 000 00 01113334456
Q ss_pred CC-EEEEEC-CccccccCcHHHHHHHHHHHHHhCCC---cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEE
Q 019410 177 GA-HIELIS-KEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIV 251 (341)
Q Consensus 177 GA-eV~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~---~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Iv 251 (341)
|. +|.++. +..|. ....+.+.+.+++.|-. ...++.+..+ +.....+ +.. ..+|.||
T Consensus 158 g~~~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~~~----~~~----~~~dav~ 219 (386)
T 3sg0_A 158 GAKKVGYIGFSDAYG----EGYYKVLAAAAPKLGFELTTHEVYARSDAS------VTGQVLK----IIA----TKPDAVF 219 (386)
T ss_dssp TCCEEEEEEESSHHH----HHHHHHHHHHHHHHTCEECCCEEECTTCSC------CHHHHHH----HHH----TCCSEEE
T ss_pred CCCEEEEEecCchHH----HHHHHHHHHHHHHcCCEEEEEEeeCCCCCc------HHHHHHH----HHh----cCCCEEE
Confidence 74 454443 22221 12233444455554421 1223332221 1111222 321 3589888
Q ss_pred EcCCchhHHHHHHHHHhcCCCCCeEEEEee
Q 019410 252 VACGSGGTIAGLSLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 252 v~vGtGGt~aGl~~~~k~~~~~~rVigVe~ 281 (341)
++ +.+..+.++...++..+.+.+++++.-
T Consensus 220 ~~-~~~~~a~~~~~~~~~~g~~~~~~~~~~ 248 (386)
T 3sg0_A 220 IA-SAGTPAVLPQKALRERGFKGAIYQTHG 248 (386)
T ss_dssp EE-CCSGGGHHHHHHHHHTTCCSEEECCGG
T ss_pred Ee-cCcchHHHHHHHHHHcCCCCcEEeccc
Confidence 74 456678889999999888888876543
No 130
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=58.82 E-value=20 Score=33.50 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=35.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ .|.-|.+.+..|+.+|.+++.+. . . .++.+++.+||+.++-
T Consensus 166 ~~VlV~Ga-~G~vG~~a~qla~~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 166 VYVLVYGG-STATATVTMQMLRLSGYIPIATC-S-P----------HNFDLAKSRGAEEVFD 214 (371)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEE-C-G----------GGHHHHHHTTCSEEEE
T ss_pred cEEEEECC-CcHHHHHHHHHHHHCCCEEEEEe-C-H----------HHHHHHHHcCCcEEEE
Confidence 45655554 47899999999999999876654 2 1 2578899999975543
No 131
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=58.58 E-value=11 Score=32.77 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=43.8
Q ss_pred HHHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 116 AVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 116 A~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
.++.|.++||.+|-. .|.| .+.|.-|..+|++++++.+.......+ .....+..++..|++|+.+
T Consensus 100 L~~~gi~~lvi~Gv~-T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~~t 165 (208)
T 1yac_A 100 VKATGKKQLIIAGVV-TEVCVAFPALSAIEEGFDVFVVTDASGTFNEI--TRHSAWDRMSQAGAQLMTW 165 (208)
T ss_dssp HHHTTCSEEEEEEBS-CCCCCHHHHHHHHHTTCEEEEETTSCBCSSHH--HHHHHHHHHHHHTCEEECH
T ss_pred HHhcCCCEEEEEEec-cchhHHHHHHHHHHCCCEEEEECcccCCCCHH--HHHHHHHHHHHcCCEEeeH
Confidence 345789999877644 4555 688999999999998887765432111 0122367777889988643
No 132
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=58.47 E-value=18 Score=32.96 Aligned_cols=48 Identities=17% Similarity=0.087 Sum_probs=35.3
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ .|.-|.+.+..|+.+|.+++++.+ ..+...++.+||+.++
T Consensus 154 ~~vlV~Ga-~G~vG~~a~q~a~~~Ga~vi~~~~------------~~~~~~~~~lGa~~~i 201 (321)
T 3tqh_A 154 DVVLIHAG-AGGVGHLAIQLAKQKGTTVITTAS------------KRNHAFLKALGAEQCI 201 (321)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEEC------------HHHHHHHHHHTCSEEE
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHcCCEEEEEec------------cchHHHHHHcCCCEEE
Confidence 56666654 478999999999999998665542 1247788899998544
No 133
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=58.34 E-value=15 Score=34.02 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=36.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ +|.-|.+++..|+.+|.+++++.+.. .++..++.+|++.+.-
T Consensus 161 ~~VlV~Ga-sg~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~v~~ 210 (342)
T 4eye_A 161 ETVLVLGA-AGGIGTAAIQIAKGMGAKVIAVVNRT-----------AATEFVKSVGADIVLP 210 (342)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSG-----------GGHHHHHHHTCSEEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCcEEec
Confidence 55665554 47899999999999999876665432 2477888899986553
No 134
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=58.23 E-value=20 Score=33.14 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=34.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+ ++.+... ..++..++.+||+.++
T Consensus 170 ~~VlV~Ga--G~vG~~a~qla~~~Ga~-Vi~~~~~----------~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 170 TTVLVIGA--GPIGLVSVLAAKAYGAF-VVCTARS----------PRRLEVAKNCGADVTL 217 (352)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEEESC----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCE-EEEEcCC----------HHHHHHHHHhCCCEEE
Confidence 55555663 78999999999999999 4444322 2357788899997544
No 135
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=58.13 E-value=76 Score=26.77 Aligned_cols=64 Identities=9% Similarity=0.143 Sum_probs=45.3
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCC
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVD 304 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~ 304 (341)
.|+.++..+ ..++.||+.+|.-+.+.|+..++- ...||||.+......+.....++.+ +.+++.
T Consensus 48 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvP 111 (163)
T 3ors_A 48 VQFASEARE----RGINIIIAGAGGAAHLPGMVASLT----TLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIP 111 (163)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHT-CCTTSC
T ss_pred HHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCc
Confidence 455554432 347899999999999999998874 4689999988665445566666766 555554
No 136
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=58.11 E-value=10 Score=32.77 Aligned_cols=63 Identities=11% Similarity=-0.003 Sum_probs=42.0
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++++.+.......+ .....+..++ .|++|+.
T Consensus 116 ~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~l~-~~a~v~t 178 (204)
T 3hb7_A 116 KEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEE--MHEYGLNDLS-IFTKVMT 178 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHH-HHSEEEC
T ss_pred HHCCCCEEEEEeecccHHHHHHHHHHHHCCCEEEEechhccCCCHH--HHHHHHHHHH-hCCEEee
Confidence 4578999998765443444688899999999999998754432111 0123466677 7887753
No 137
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=58.01 E-value=15 Score=34.23 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=34.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHc-CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~-Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|..++..|+.+ |.+++++.+. ..++..++.+||+.++
T Consensus 188 ~~VlV~Ga--G~vG~~avqlak~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi 236 (359)
T 1h2b_A 188 AYVAIVGV--GGLGHIAVQLLKVMTPATVIALDVK-----------EEKLKLAERLGADHVV 236 (359)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCCCEEEEEESS-----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEeCC-----------HHHHHHHHHhCCCEEE
Confidence 56665665 68999999999999 9975544432 2357888999997554
No 138
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=57.81 E-value=98 Score=27.16 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=27.1
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
.++|+||+ .+..++.|+..+++..|. ++.|+|++
T Consensus 196 ~~~~ai~~--~nd~~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 196 DGPTAVVV--ASVNAAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp TSCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 46999997 456788899999998773 67888875
No 139
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=57.48 E-value=1.1e+02 Score=27.56 Aligned_cols=154 Identities=12% Similarity=0.005 Sum_probs=76.2
Q ss_pred HHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHc-CCeEEEEEcCCC--CCcCC-CCC-cch-hH-----HHHHhCCC-
Q 019410 111 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSK--VLVDQ-DPG-LIG-NL-----LVERLVGA- 178 (341)
Q Consensus 111 ~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~-Gl~~~ivvp~~~--~~~~~-~~~-~~g-n~-----~~~~~~GA- 178 (341)
..+..+.+++++.||..+... .-++..+++.+ +++++++-.... +.... ... ..+ .+ ..+-..|.
T Consensus 53 ~~l~~l~~~~~dgIi~~~~~~---~~~~~~~a~~~p~~p~v~id~~~~~~~~~~~v~~d~~~~~~lag~~a~~l~~~Gh~ 129 (318)
T 2fqx_A 53 PSLSAFADENMGLVVACGSFL---VEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGK 129 (318)
T ss_dssp HHHHHHHHTTCSEEEEESTTT---HHHHHHHHHHCTTSCEEEESSCCCSCTTEEEEEECHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECChhH---HHHHHHHHHHCCCCEEEEEcCccCCCCCEEEEEechHHHHHHHHHHHHHHhccCCC
Confidence 346666778899999765322 22344445543 888877743211 11000 000 011 11 12334575
Q ss_pred -EEEEECCccccccCcHHHHHHHHHHHHHhCCCc--EEeCCCC-CchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcC
Q 019410 179 -HIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGG-SNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 254 (341)
Q Consensus 179 -eV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~--~~ip~g~-~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~v 254 (341)
+|-++...... ....+..-..+-+++.++.. ..+-.+. .++. .|+ .++.+++++ .+|+||+..
T Consensus 130 r~Ig~i~g~~~~--~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~--~g~-~~a~~ll~~--------~~daI~~~~ 196 (318)
T 2fqx_A 130 SAVGFIVGMELG--MMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQ--KGQ-ALAAKLYDS--------GVNVIFQVA 196 (318)
T ss_dssp CEEEEEESCCST--TTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHH--HHH-HHHHHHHHT--------TCCEEEEEC
T ss_pred cEEEEEeCcccH--HHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHH--HHH-HHHHHHHHC--------CCcEEEECC
Confidence 88777542221 11223333444444444332 2221221 2232 243 334455432 389988754
Q ss_pred CchhHHHHHHHHHhcCC---CCCeEEEEeeC
Q 019410 255 GSGGTIAGLSLGSWLGT---LKAKVHAFSVC 282 (341)
Q Consensus 255 GtGGt~aGl~~~~k~~~---~~~rVigVe~~ 282 (341)
+.+..|+..++++.+ .++.|+|++-.
T Consensus 197 --d~~a~Gv~~a~~e~g~~P~dv~viG~D~~ 225 (318)
T 2fqx_A 197 --GGTGNGVIKEARDRRLNGQDVWVIGVDRD 225 (318)
T ss_dssp --GGGHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred --CCCchHHHHHHHhhhhccCCcEEEEEecc
Confidence 456777887777632 46899999854
No 140
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=57.19 E-value=84 Score=27.28 Aligned_cols=73 Identities=10% Similarity=-0.055 Sum_probs=43.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHHHHHHH
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILK 201 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a 201 (341)
..||| |++ |.-|.++|..-.+.|.+++++-+.... ...-...++..|.++..+.-+-- ..+.++.+.
T Consensus 9 ~vlVT-Gas-~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~ 75 (252)
T 3h7a_A 9 TVAVI-GAG-DYIGAEIAKKFAAEGFTVFAGRRNGEK-------LAPLVAEIEAAGGRIVARSLDAR----NEDEVTAFL 75 (252)
T ss_dssp EEEEE-CCS-SHHHHHHHHHHHHTTCEEEEEESSGGG-------GHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHH
T ss_pred EEEEE-CCC-chHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEECcCC----CHHHHHHHH
Confidence 34555 544 688999999999999997777654321 11224456667888877754321 123334555
Q ss_pred HHHHHh
Q 019410 202 EKLLKE 207 (341)
Q Consensus 202 ~~l~~~ 207 (341)
+++.+.
T Consensus 76 ~~~~~~ 81 (252)
T 3h7a_A 76 NAADAH 81 (252)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 555444
No 141
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=56.73 E-value=1e+02 Score=27.08 Aligned_cols=54 Identities=15% Similarity=-0.024 Sum_probs=34.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
.||| |+ +|--|+++|..-.+.|.+++++-+.... ...-...++..|.++..+.-
T Consensus 7 ~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~ 60 (264)
T 3tfo_A 7 ILIT-GA-SGGIGEGIARELGVAGAKILLGARRQAR-------IEAIATEIRDAGGTALAQVL 60 (264)
T ss_dssp EEES-ST-TSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEe-CC-ccHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEc
Confidence 3454 54 4688999999999999997777553221 01123455667888777653
No 142
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=56.66 E-value=19 Score=34.05 Aligned_cols=47 Identities=17% Similarity=0.051 Sum_probs=33.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCC-eEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl-~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..| + |--|..++..|+.+|. +++++.+. ..++.+++.+||+++
T Consensus 187 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~-----------~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 187 SHVYIAG-A-GPVGRCAAAGARLLGAACVIVGDQN-----------PERLKLLSDAGFETI 234 (398)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEEESC-----------HHHHHHHHTTTCEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCC-----------HHHHHHHHHcCCcEE
Confidence 5566566 3 7899999999999999 55444332 235788899999743
No 143
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=56.61 E-value=51 Score=29.81 Aligned_cols=140 Identities=14% Similarity=0.052 Sum_probs=74.0
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCC--CC-------C--c--chhHHHHHhCCC-EEEEEC-
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DP-------G--L--IGNLLVERLVGA-HIELIS- 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~--~~-------~--~--~gn~~~~~~~GA-eV~~v~- 184 (341)
+.+.||. ...+....+++-.+...+++.+.+.......... .+ . . ..-.+.+...|. +|-++.
T Consensus 82 ~v~~iig--~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~ 159 (375)
T 4evq_A 82 KADVLIG--TVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLKKAVTVTW 159 (375)
T ss_dssp CCSEEEE--CSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CceEEEc--CCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCCcEEEEEec
Confidence 6777773 3445677788888999999987654211100000 00 0 0 011234444575 454443
Q ss_pred CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHH
Q 019410 185 KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 261 (341)
Q Consensus 185 ~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~a 261 (341)
+..|. ....+.+.+.+++.|-.. ..++.+..+. .....+|.+ ..+|.||+. +++..+.
T Consensus 160 ~~~~~----~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d~------~~~~~~l~~--------~~~dai~~~-~~~~~a~ 220 (375)
T 4evq_A 160 KYAAG----EEMVSGFKKSFTAGKGEVVKDITIAFPDVEF------QSALAEIAS--------LKPDCVYAF-FSGGGAL 220 (375)
T ss_dssp SSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCCCC------HHHHHHHHH--------HCCSEEEEE-CCTHHHH
T ss_pred CchHH----HHHHHHHHHHHHHcCCeEEEEEecCCCCccH------HHHHHHHHh--------cCCCEEEEe-cCcchHH
Confidence 22221 123344455555554221 1233322211 112223322 258998875 5567899
Q ss_pred HHHHHHhcCCCCCeEEEEe
Q 019410 262 GLSLGSWLGTLKAKVHAFS 280 (341)
Q Consensus 262 Gl~~~~k~~~~~~rVigVe 280 (341)
++...++..+.++.+++..
T Consensus 221 ~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 221 KFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp HHHHHHHHTTCCCCEEEEG
T ss_pred HHHHHHHHcCCCceEEecC
Confidence 9999999999889998864
No 144
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=56.45 E-value=7.9 Score=33.57 Aligned_cols=60 Identities=8% Similarity=-0.033 Sum_probs=40.2
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHH--hCCCEEE
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER--LVGAHIE 181 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~--~~GAeV~ 181 (341)
|.++||.+|-....=-.+.|.-|..+|++++++.+.......+ .....+..++ ..|++|+
T Consensus 106 gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~--~h~~aL~~m~~~~~g~~v~ 167 (200)
T 1x9g_A 106 DVDNAVVFGIEGHACILQTVADLLDMNKRVFLPKDGLGSQKKT--DFKAAIKLMSSWGPNCEIT 167 (200)
T ss_dssp TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEGGGEECSSHH--HHHHHHHHHHTSCSSEEEE
T ss_pred CCCEEEEEEEecCcHHHHHHHHHHhCCCEEEEeCCCcCCCCHH--HHHHHHHHHHhhCCCeEEe
Confidence 8999998765443444688999999999999887654432111 0123366777 7888776
No 145
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=56.39 E-value=98 Score=26.72 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=22.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 5 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 5 AMVT-GG-AQGIGRGISEKLAADGFDIAVADL 34 (258)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3555 54 468899999888888988776654
No 146
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=56.19 E-value=24 Score=31.96 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=36.0
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
|+..| .+|.-|.+.+..|+.+|.+++++.+.. .+...++.+||+.++-
T Consensus 150 VlV~G-a~G~vG~~aiqla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~vi~ 197 (324)
T 3nx4_A 150 VVVTG-ASGGVGSTAVALLHKLGYQVAAVSGRE-----------STHGYLKSLGANRILS 197 (324)
T ss_dssp EEESS-TTSHHHHHHHHHHHHTTCCEEEEESCG-----------GGHHHHHHHTCSEEEE
T ss_pred EEEEC-CCcHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCCEEEe
Confidence 55555 447899999999999999877766432 2578889999976553
No 147
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=56.12 E-value=70 Score=28.97 Aligned_cols=32 Identities=22% Similarity=0.043 Sum_probs=23.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+ +|--|.++|..-.+.|.+++++-+.
T Consensus 29 ~vlVT-Ga-s~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 29 VVIVT-GA-GGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 34454 54 4688999999999999988877543
No 148
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=56.02 E-value=1.1e+02 Score=27.24 Aligned_cols=149 Identities=15% Similarity=0.081 Sum_probs=76.5
Q ss_pred HHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCC--------CC--cchh--HH-HHHhCCC
Q 019410 112 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD--------PG--LIGN--LL-VERLVGA 178 (341)
Q Consensus 112 ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~--------~~--~~gn--~~-~~~~~GA 178 (341)
.+.+...++.+.||. ...+....+++-.+...+++++............. +. ..+. .+ +++.+|.
T Consensus 61 ~~~~l~~~~v~~iig--~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 138 (356)
T 3ipc_A 61 VANKFVADGVKFVVG--HANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKD 138 (356)
T ss_dssp HHHHHHHTTCCEEEE--CSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCCcEEEc--CCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHHHhcCC
Confidence 344444578888773 34456777888889999998766432211100000 10 0011 12 2344575
Q ss_pred E-EEEEC-CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEc
Q 019410 179 H-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 253 (341)
Q Consensus 179 e-V~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~ 253 (341)
+ |.++. ...|. ....+.+.+.+++.|-.. ..++.+..+ +.... +++.. ..+|.||++
T Consensus 139 ~~iaii~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~----~~l~~----~~~d~v~~~ 200 (356)
T 3ipc_A 139 AKVAIIHDKTPYG----QGLADETKKAANAAGVTEVMYEGVNVGDKD------FSALI----SKMKE----AGVSIIYWG 200 (356)
T ss_dssp CCEEEEECSSHHH----HHHHHHHHHHHHHTTCCCSEEEECCTTCCC------CHHHH----HHHHH----TTCCEEEEE
T ss_pred CEEEEEeCCChHH----HHHHHHHHHHHHHcCCEEEEEEeeCCCCCC------HHHHH----HHHHh----cCCCEEEEc
Confidence 4 54443 22231 123344455555544221 122322211 11222 23321 358988874
Q ss_pred CCchhHHHHHHHHHhcCCCCCeEEEEee
Q 019410 254 CGSGGTIAGLSLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 254 vGtGGt~aGl~~~~k~~~~~~rVigVe~ 281 (341)
+.+..+.++...++..+.++++++...
T Consensus 201 -~~~~~a~~~~~~~~~~g~~~~~~~~~~ 227 (356)
T 3ipc_A 201 -GLHTEAGLIIRQAADQGLKAKLVSGDG 227 (356)
T ss_dssp -SCHHHHHHHHHHHHHHTCCCEEEECGG
T ss_pred -cCchHHHHHHHHHHHCCCCCcEEEecc
Confidence 566778899999998888888887543
No 149
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=55.98 E-value=23 Score=32.83 Aligned_cols=49 Identities=16% Similarity=0.180 Sum_probs=33.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+-++.+... ..++.+++.+||+.++
T Consensus 173 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 173 HKVLVCGA--GPIGMVTLLVAKAMGAAQVVVTDLS----------ATRLSKAKEIGADLVL 221 (356)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESC----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHhCCCEEE
Confidence 55555663 7899999999999999444444322 2357888999997443
No 150
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=55.86 E-value=20 Score=33.60 Aligned_cols=48 Identities=8% Similarity=0.027 Sum_probs=34.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+++++.+.. .++..++.+||+.++
T Consensus 196 ~~VlV~Ga--G~vG~~aiqlak~~Ga~Vi~~~~~~-----------~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 196 KKVGVVGI--GGLGHMGIKLAHAMGAHVVAFTTSE-----------AKREAAKALGADEVV 243 (369)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSG-----------GGHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEe
Confidence 55555664 6799999999999999854444321 247778889997554
No 151
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=55.59 E-value=1.1e+02 Score=26.87 Aligned_cols=32 Identities=25% Similarity=0.140 Sum_probs=23.8
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |++ +--|.++|..-.+.|.+++++-+
T Consensus 12 k~~lVT-Gas-~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFIT-GAA-RGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE-CCc-cHHHHHHHHHHHHcCCEEEEEec
Confidence 334555 543 67899999999999998887754
No 152
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=55.51 E-value=67 Score=27.24 Aligned_cols=30 Identities=27% Similarity=0.115 Sum_probs=22.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|.++|....+.|.+++++.+
T Consensus 5 vlIT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 5 AVIT-GA-SRGIGEAIARALARDGYALALGAR 34 (235)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4555 54 468899999999889988666654
No 153
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=55.51 E-value=28 Score=32.00 Aligned_cols=49 Identities=16% Similarity=0.107 Sum_probs=34.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++..|.+++++.+.. .+...++.+|++.++
T Consensus 171 ~~vlV~Ga-~ggiG~~~~~~a~~~Ga~V~~~~~~~-----------~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 171 HWVAISGA-AGGLGSLAVQYAKAMGYRVLGIDGGE-----------GKEELFRSIGGEVFI 219 (347)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECST-----------THHHHHHHTTCCEEE
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCcEEEEcCCH-----------HHHHHHHHcCCceEE
Confidence 45554554 47899999999999999776665432 146677889987543
No 154
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=55.01 E-value=1.2e+02 Score=27.23 Aligned_cols=156 Identities=15% Similarity=0.074 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC----cCCCCCcchh--HHHHHhCCCE-EEE
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGAH-IEL 182 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~----~~~~~~~~gn--~~~~~~~GAe-V~~ 182 (341)
..++.....++.+.||..+.. .+. .....+...|++++++-+..... ...+....+. .+.+...|.+ |-+
T Consensus 114 ~~~i~~l~~~~vdGiIi~~~~-~~~--~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~ 190 (344)
T 3kjx_A 114 EKVLYEMLSWRPSGVIIAGLE-HSE--AARAMLDAAGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYRRIGF 190 (344)
T ss_dssp HHHHHHHHTTCCSEEEEECSC-CCH--HHHHHHHHCSSCEEEEEECSSCCSSEEEEECHHHHHHHHHHHHHHHTCCSCCE
T ss_pred HHHHHHHHhCCCCEEEEECCC-CCH--HHHHHHHhCCCCEEEEeCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEE
Confidence 345666677889998876532 222 34445667899998884321110 0000000011 1222234543 444
Q ss_pred ECCcc-ccccCcHHHHHHHHHHHHHhCCC--cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhH
Q 019410 183 ISKEE-YSKIGSVTLTNILKEKLLKEGRR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 259 (341)
Q Consensus 183 v~~~~-~~~~~~~~~~~~~a~~l~~~g~~--~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt 259 (341)
+.... ... ....+.+-+.+.+++.+.. ...+..+..+.. .|+ ....+++++- .++|+||+ .+...
T Consensus 191 i~~~~~~~~-~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~--~~~-~~~~~ll~~~------~~~~ai~~--~nd~~ 258 (344)
T 3kjx_A 191 MGTKMPLDY-RARKRFEGFTEVLGKNGVEIEDREFYSGGSALA--KGR-EMTQAMLERS------PDLDFLYY--SNDMI 258 (344)
T ss_dssp EESSTTTCH-HHHHHHHHHHHHHHHTTCCCSCEEECSSCCCHH--HHH-HHHHHHHHHS------TTCCEEEE--SSHHH
T ss_pred EecCcccCc-cHHHHHHHHHHHHHHcCCCCChheEEeCCCCHH--HHH-HHHHHHHhcC------CCCCEEEE--CCHHH
Confidence 43221 011 1112333344455554321 122222222222 233 3445555542 36999995 56688
Q ss_pred HHHHHHHHhcCCC----CCeEEEEe
Q 019410 260 IAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 260 ~aGl~~~~k~~~~----~~rVigVe 280 (341)
+.|+..+++..+. ++.|+|++
T Consensus 259 A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 259 AAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp HHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEC
Confidence 8999999998774 56777765
No 155
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=54.98 E-value=11 Score=32.29 Aligned_cols=62 Identities=15% Similarity=0.029 Sum_probs=39.4
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++.|.++||.+|-. .|.| .+.|..|..+|++++++.+.......+ .....+..++..|++|+
T Consensus 128 ~~~gi~~lvi~G~~-T~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~--~h~~al~~~~~~~~~v~ 190 (199)
T 1j2r_A 128 RRRGIDTIVLCGIS-TNIGVESTARNAWELGFNLVIAEDACSAASAE--QHNNSINHIYPRIARVR 190 (199)
T ss_dssp HHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEEBSSHH--HHHHHHHHTHHHHSEEE
T ss_pred HHCCCCEEEEEeee-ccHHHHHHHHHHHHCCCEEEEehhhcCCCCHH--HHHHHHHHHHHheeEEe
Confidence 45789999987644 4555 578999999999999998755432110 01122444555566665
No 156
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=54.65 E-value=18 Score=33.13 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=37.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++|+..|+ .|.-|.+++..|+.+|.+++++.+. ..++..++.+|++.++..
T Consensus 150 ~~vlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~-----------~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 150 DYVLLFAA-AGGVGLILNQLLKMKGAHTIAVAST-----------DEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTTCSEEEET
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHcCCcEEEeC
Confidence 55655553 4789999999999999986666542 135778889999865543
No 157
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=54.61 E-value=1.2e+02 Score=26.98 Aligned_cols=147 Identities=12% Similarity=-0.022 Sum_probs=77.9
Q ss_pred HHHHHHHc-CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-cCCCC-------C----cchhHHHHHhCCC
Q 019410 112 LMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-VDQDP-------G----LIGNLLVERLVGA 178 (341)
Q Consensus 112 ll~~A~~~-g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-~~~~~-------~----~~gn~~~~~~~GA 178 (341)
.+.+...+ +.+.||. ...+....+++-.+...+++++.+... +. ....+ . ...-.+.+..+|.
T Consensus 60 ~~~~l~~~~~v~~iig--~~~s~~~~~~~~~~~~~~ip~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 135 (362)
T 3snr_A 60 NARRFVTESKADVIMG--SSVTPPSVAISNVANEAQIPHIALAPL--PITPERAKWSVVMPQPIPIMGKVLYEHMKKNNV 135 (362)
T ss_dssp HHHHHHHTSCCSEEEE--CSSHHHHHHHHHHHHHHTCCEEESSCC--CCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCceEEEc--CCCcHHHHHHHHHHHHcCccEEEecCC--ccccCCCCcEEecCCChHHHHHHHHHHHHhcCC
Confidence 34444555 7888883 344566777888889999998765432 11 00000 0 0111334445675
Q ss_pred -EEEEEC-CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEc
Q 019410 179 -HIELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 253 (341)
Q Consensus 179 -eV~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~ 253 (341)
+|.++. ...|. ....+.+.+.+++.|-.. ..++.+..+ +.....+|.+ ..+|+||++
T Consensus 136 ~~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~--------~~~dav~~~ 197 (362)
T 3snr_A 136 KTVGYIGYSDSYG----DLWFNDLKKQGEAMGLKIVGEERFARPDTS------VAGQALKLVA--------ANPDAILVG 197 (362)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCSC------CHHHHHHHHH--------HCCSEEEEE
T ss_pred CEEEEEecCchHH----HHHHHHHHHHHHHcCCEEEEEeecCCCCCC------HHHHHHHHHh--------cCCCEEEEe
Confidence 454443 22221 123344455555554221 122322221 1112223322 258988874
Q ss_pred CCchhHHHHHHHHHhcCCCCCeEEEEee
Q 019410 254 CGSGGTIAGLSLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 254 vGtGGt~aGl~~~~k~~~~~~rVigVe~ 281 (341)
+.+..+.++...++..+.+++++++.-
T Consensus 198 -~~~~~a~~~~~~~~~~g~~~p~i~~~g 224 (362)
T 3snr_A 198 -ASGTAAALPQTTLRERGYNGLIYQTHG 224 (362)
T ss_dssp -CCHHHHHHHHHHHHHTTCCSEEEECGG
T ss_pred -cCcchHHHHHHHHHHcCCCccEEeccC
Confidence 567788999999999998888876543
No 158
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=54.50 E-value=38 Score=31.27 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=34.7
Q ss_pred CeEEEeCCCcchHHHHH-HHHH-HHcCCe-EEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAA-AVAA-KYLNLD-CYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~Al-A~aa-~~~Gl~-~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |.-|..+ +..| +.+|.+ ++++.+.... ..+...++.+||+.+
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~--------~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRP--------DPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSS--------CHHHHHHHHTTCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCccc--------HHHHHHHHHcCCccc
Confidence 56666665 7899998 9999 999998 5555432210 014778889999866
No 159
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=54.20 E-value=1.2e+02 Score=27.02 Aligned_cols=31 Identities=16% Similarity=-0.075 Sum_probs=22.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|.++|......|.+++++.+
T Consensus 36 ~vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~r 66 (291)
T 3cxt_A 36 IALVT-GA-SYGIGFAIASAYAKAGATIVFNDI 66 (291)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478899999988888988776654
No 160
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=54.09 E-value=92 Score=29.29 Aligned_cols=101 Identities=13% Similarity=0.088 Sum_probs=49.0
Q ss_pred HHHhCC-CEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEE
Q 019410 172 VERLVG-AHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 250 (341)
Q Consensus 172 ~~~~~G-AeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~I 250 (341)
.++.+| -++.++.+....... ....+++.+.|.+.+-....++....||.- ....++.+++.+ ..+| +
T Consensus 27 ~l~~~g~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d-~ 95 (387)
T 3bfj_A 27 RCQLLGGKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNPKD-----TNVRDGLAVFRR----EQCD-I 95 (387)
T ss_dssp HHHHTTCSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSCBH-----HHHHHHHHHHHH----TTCC-E
T ss_pred HHHHcCCCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCCC-E
Confidence 344566 455555432221110 012345555665544223344544445432 233455555543 3466 5
Q ss_pred EEcCCchhH--HHHHHHHH---------hc-----CCCCCeEEEEeeCC
Q 019410 251 VVACGSGGT--IAGLSLGS---------WL-----GTLKAKVHAFSVCD 283 (341)
Q Consensus 251 vv~vGtGGt--~aGl~~~~---------k~-----~~~~~rVigVe~~g 283 (341)
|+++|+|.. +++.+... +. ..+.++++.|..-.
T Consensus 96 IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 96 IVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp EEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred EEEeCCcchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 677888776 44444443 11 01467889888654
No 161
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.95 E-value=27 Score=27.35 Aligned_cols=30 Identities=10% Similarity=-0.012 Sum_probs=23.4
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+++.+|+ |..|.++|......|++++++-+
T Consensus 8 ~v~I~G~--G~iG~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 8 EYIVIGS--EAAGVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp SEEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCeEEEEEC
Confidence 4555565 89999999999999998777643
No 162
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=53.87 E-value=1.2e+02 Score=26.83 Aligned_cols=31 Identities=23% Similarity=0.043 Sum_probs=22.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|--|+++|..-.+.|.+++++-+
T Consensus 27 ~~lVT-Ga-s~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 27 TAVIT-GS-TSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 367899999888888987666543
No 163
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=53.82 E-value=1.2e+02 Score=26.73 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=23.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 24 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 24 VALVT-GA-TSGIGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478999999998889988777654
No 164
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=53.81 E-value=1.1e+02 Score=26.51 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=24.7
Q ss_pred CeEEEeCCCc-chHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~-GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
++++..|+++ +--|.++|....+.|.+++++.+..
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCc
Confidence 3444446553 6789999999999999887776543
No 165
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=53.63 E-value=1.1e+02 Score=26.41 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=27.4
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
.++|+||+ .+...+.|+..+++..+. ++.|+|++
T Consensus 187 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 187 NTPKALFC--NSDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp SCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCcEEEE--cCCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 46899996 467788899999998773 67899987
No 166
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=53.51 E-value=23 Score=32.24 Aligned_cols=48 Identities=13% Similarity=0.011 Sum_probs=34.7
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
+|+..|+ +|.-|.+++..|+.+|.+.+++.+... ++..++.+||+.++
T Consensus 152 ~VlV~Ga-~G~vG~~~~q~a~~~Ga~vi~~~~~~~-----------~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 152 PVLVTGA-TGGVGSLAVSMLAKRGYTVEASTGKAA-----------EHDYLRVLGAKEVL 199 (328)
T ss_dssp CEEESST-TSHHHHHHHHHHHHTTCCEEEEESCTT-----------CHHHHHHTTCSEEE
T ss_pred eEEEecC-CCHHHHHHHHHHHHCCCEEEEEECCHH-----------HHHHHHHcCCcEEE
Confidence 4555554 478999999999999998666654321 46778889997544
No 167
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=53.31 E-value=20 Score=28.92 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=25.4
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.++|+.+|+ |..|..+|...+..|.+++++-+
T Consensus 19 ~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGC--GRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEECC--CHHHHHHHHHHHhCCCeEEEEEC
Confidence 356666675 89999999999999998777654
No 168
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=53.26 E-value=1.1e+02 Score=26.12 Aligned_cols=31 Identities=26% Similarity=0.145 Sum_probs=21.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|--|.++|..-...|.+++++-+
T Consensus 16 ~vlIT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 16 VILVT-GA-ARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp EEEES-ST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CChHHHHHHHHHHHCCCEEEEEec
Confidence 34454 54 468888888888888887666543
No 169
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=53.23 E-value=21 Score=32.91 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=33.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |.-|.+++..|+.+|.+++++.+. ..++..++.+|++.+
T Consensus 166 ~~VlV~Ga--G~vG~~~~~~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 166 EWVAIYGI--GGLGHVAVQYAKAMGLNVVAVDIG-----------DEKLELAKELGADLV 212 (339)
T ss_dssp CEEEEECC--STTHHHHHHHHHHTTCEEEEECSC-----------HHHHHHHHHTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHHCCCCEE
Confidence 45655665 459999999999999965555432 235777888999754
No 170
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=53.14 E-value=1.1e+02 Score=26.44 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=22.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|.++|..-...|.+++++.+
T Consensus 9 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 9 VCLVT-GA-GGNIGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 468999999998889988776654
No 171
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=52.86 E-value=15 Score=35.46 Aligned_cols=50 Identities=14% Similarity=0.047 Sum_probs=37.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ +|--|.+.+..|+.+|.+.+++.+. ..++..++.+||+.++-
T Consensus 230 ~~VlV~Ga-sG~vG~~avqlak~~Ga~vi~~~~~-----------~~~~~~~~~lGa~~vi~ 279 (456)
T 3krt_A 230 DNVLIWGA-SGGLGSYATQFALAGGANPICVVSS-----------PQKAEICRAMGAEAIID 279 (456)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHHTCCEEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCeEEEEECC-----------HHHHHHHHhhCCcEEEe
Confidence 55665554 4789999999999999988877642 23688889999986554
No 172
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=52.64 E-value=1.1e+02 Score=26.04 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=34.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|+ +|.-|+++|..-...|.+++++.+.... .......++..|.++..+..
T Consensus 13 ~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~ 67 (255)
T 1fmc_A 13 CAIITGA-GAGIGKEIAITFATAGASVVVSDINADA-------ANHVVDEIQQLGGQAFACRC 67 (255)
T ss_dssp EEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHHhCCceEEEEc
Confidence 3443454 4789999999999999997777653221 01113344556777766643
No 173
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=52.55 E-value=1.2e+02 Score=26.43 Aligned_cols=36 Identities=8% Similarity=-0.076 Sum_probs=28.7
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEeeC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 282 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~~ 282 (341)
.++|+||+. +..++.|+..++++.+. ++.|+|++-.
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 223 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDS 223 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCH
Confidence 469999874 66788899999998763 6789998744
No 174
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=52.54 E-value=18 Score=32.87 Aligned_cols=67 Identities=10% Similarity=0.100 Sum_probs=43.7
Q ss_pred HHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 116 AVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 116 A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
.++.|.++||.+|-....=..+.|.-|..+|++++++.+.......+ .....+..++..|++|+.+.
T Consensus 140 L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~~~~v~~t~ 206 (287)
T 2fq1_A 140 LKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRD--EHLMSLKYVAGRSGRVVMTE 206 (287)
T ss_dssp HHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEECHH
T ss_pred HHHCCCCEEEEEEeCcchHHHHHHHHHHHCCCEEEEechhccCCCHH--HHHHHHHHHHHhCcEEeeHH
Confidence 34578999998764443344678889999999999998754432111 01223566667788877543
No 175
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=52.03 E-value=1.2e+02 Score=26.27 Aligned_cols=32 Identities=13% Similarity=-0.011 Sum_probs=22.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |++.+.-|.++|....+.|.+++++-+
T Consensus 24 ~vlIT-Gasg~GIG~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 24 VVLVT-AAAGTGIGSTTARRALLEGADVVISDY 55 (266)
T ss_dssp EEEES-SCSSSSHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCCCCchHHHHHHHHHHCCCEEEEecC
Confidence 34454 654336899999988889988766654
No 176
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=52.00 E-value=21 Score=33.02 Aligned_cols=49 Identities=14% Similarity=0.020 Sum_probs=34.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+.+..|+.+|.+-++.+... ..++.+++.+||+.++
T Consensus 168 ~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 168 DTVCVIGI--GPVGLMSVAGANHLGAGRIFAVGSR----------KHCCDIALEYGATDII 216 (352)
T ss_dssp CCEEEECC--SHHHHHHHHHHHTTTCSSEEEECCC----------HHHHHHHHHHTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCcEEEEECCC----------HHHHHHHHHhCCceEE
Confidence 44554563 7899999999999999544444332 2357888999997554
No 177
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=51.86 E-value=22 Score=31.96 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=34.3
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..|+.+|.+++++.+.. .++..++.+|++.+.
T Consensus 127 ~~vlV~Ga-~G~vG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 175 (302)
T 1iz0_A 127 EKVLVQAA-AGALGTAAVQVARAMGLRVLAAASRP-----------EKLALPLALGAEEAA 175 (302)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCEEEEEESSG-----------GGSHHHHHTTCSEEE
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCCEEE
Confidence 45555554 47899999999999999766655422 135567789987543
No 178
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=51.80 E-value=18 Score=33.05 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=35.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHH-HhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVE-RLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~-~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..|+..|.+++++.+.. .++..+ +.+|++.++
T Consensus 151 ~~vlI~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 151 ETVVISGA-AGAVGSVAGQIARLKGCRVVGIAGGA-----------EKCRFLVEELGFDGAI 200 (336)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHHcCCCEEE
Confidence 55655554 47899999999999999776665421 246667 889997554
No 179
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=51.74 E-value=73 Score=30.53 Aligned_cols=92 Identities=12% Similarity=0.186 Sum_probs=49.8
Q ss_pred CCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCc--EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC--EEE
Q 019410 176 VGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD--DIV 251 (341)
Q Consensus 176 ~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~--~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D--~Iv 251 (341)
.|-++.++.+.... ..+.+++.+.+.+.+-.. +.+|.+-.|+.- ....++++++.+ ..+| .+|
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~-----~~v~~~~~~l~~----~~~~R~d~I 127 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTL-----ETFNTVMSFLLE----HNYSRDVVV 127 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBH-----HHHHHHHHHHHH----TTCCTTCEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchH-----HHHHHHHHHHHh----cCCCcCcEE
Confidence 35566555432221 124455666666654222 345655444432 234556665543 2343 678
Q ss_pred EcCCchhH--HHHHHHHHhcCCCCCeEEEEeeC
Q 019410 252 VACGSGGT--IAGLSLGSWLGTLKAKVHAFSVC 282 (341)
Q Consensus 252 v~vGtGGt--~aGl~~~~k~~~~~~rVigVe~~ 282 (341)
+++|+|.. ++|.+.+.+. ..++++.|...
T Consensus 128 IAvGGGsv~D~ak~~Aa~~~--rgip~I~IPTT 158 (390)
T 3okf_A 128 IALGGGVIGDLVGFAAACYQ--RGVDFIQIPTT 158 (390)
T ss_dssp EEEESHHHHHHHHHHHHHBT--TCCEEEEEECS
T ss_pred EEECCcHHhhHHHHHHHHhc--CCCCEEEeCCC
Confidence 89999877 3665554433 56788888864
No 180
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=51.25 E-value=15 Score=34.01 Aligned_cols=50 Identities=20% Similarity=0.167 Sum_probs=35.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|| .|.-|.+++..|+.+|.+++++.+. ..++..++.+||+.++.
T Consensus 152 ~~VlV~gg-~G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi~ 201 (346)
T 3fbg_A 152 KTLLIING-AGGVGSIATQIAKAYGLRVITTASR-----------NETIEWTKKMGADIVLN 201 (346)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEECCS-----------HHHHHHHHHHTCSEEEC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCcEEEE
Confidence 45554544 3789999999999999975555331 23678888899976543
No 181
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=51.05 E-value=17 Score=34.87 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=36.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..|+.+|.+.+++.+. ..++..++.+||+.++
T Consensus 222 ~~VlV~Ga-sG~iG~~a~qla~~~Ga~vi~~~~~-----------~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 222 DIVLIWGA-SGGLGSYAIQFVKNGGGIPVAVVSS-----------AQKEAAVRALGCDLVI 270 (447)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTTCCCEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCCEEE
Confidence 55665554 4789999999999999988777642 2367888999997554
No 182
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=50.99 E-value=38 Score=28.87 Aligned_cols=52 Identities=17% Similarity=0.160 Sum_probs=35.9
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCC-EEEEEC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGA-HIELIS 184 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GA-eV~~v~ 184 (341)
|.+.+|| | .+|.-|.++|......|.+++++.+... +...+...+. +++..+
T Consensus 21 ~~~ilVt-G-atG~iG~~l~~~L~~~G~~V~~~~R~~~-----------~~~~~~~~~~~~~~~~D 73 (236)
T 3e8x_A 21 GMRVLVV-G-ANGKVARYLLSELKNKGHEPVAMVRNEE-----------QGPELRERGASDIVVAN 73 (236)
T ss_dssp CCEEEEE-T-TTSHHHHHHHHHHHHTTCEEEEEESSGG-----------GHHHHHHTTCSEEEECC
T ss_pred CCeEEEE-C-CCChHHHHHHHHHHhCCCeEEEEECChH-----------HHHHHHhCCCceEEEcc
Confidence 3444555 5 4589999999999999999998876432 2444455576 666554
No 183
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=50.83 E-value=1.2e+02 Score=26.90 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=22.5
Q ss_pred CCeEEEeCCCc-chHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~-GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |+++ ..-|+++|..-.+.|.+++++-+
T Consensus 31 k~vlVT-Gasg~~GIG~~ia~~la~~G~~V~~~~r 64 (296)
T 3k31_A 31 KKGVII-GVANDKSLAWGIAKAVCAQGAEVALTYL 64 (296)
T ss_dssp CEEEEE-CCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-eCCCCCCHHHHHHHHHHHCCCEEEEEeC
Confidence 344555 5542 37888888888888888666654
No 184
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=50.76 E-value=19 Score=33.47 Aligned_cols=49 Identities=14% Similarity=0.059 Sum_probs=36.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..| .|.-|.+++..|+.+|.+++++.+. ..++..++.+||+.++-
T Consensus 191 ~~VlV~G--~G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 191 DRVVVQG--TGGVALFGLQIAKATGAEVIVTSSS-----------REKLDRAFALGADHGIN 239 (363)
T ss_dssp CEEEEES--SBHHHHHHHHHHHHTTCEEEEEESC-----------HHHHHHHHHHTCSEEEE
T ss_pred CEEEEEC--CCHHHHHHHHHHHHcCCEEEEEecC-----------chhHHHHHHcCCCEEEc
Confidence 5566565 3789999999999999986666432 23577889999976554
No 185
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=50.76 E-value=1.4e+02 Score=26.72 Aligned_cols=155 Identities=10% Similarity=0.002 Sum_probs=73.6
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC---cCCCCCcchh--HHHHHhCCCE-EEEE
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL---VDQDPGLIGN--LLVERLVGAH-IELI 183 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~---~~~~~~~~gn--~~~~~~~GAe-V~~v 183 (341)
..++.....++.+.||..+... +. .+...+...|++++++-...... ...+....+. .+.+...|-+ |-++
T Consensus 108 ~~~~~~l~~~~vdGiIi~~~~~-~~--~~~~~l~~~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i 184 (339)
T 3h5o_A 108 LQLLRAYLQHRPDGVLITGLSH-AE--PFERILSQHALPVVYMMDLADDGRCCVGFSQEDAGAAITRHLLSRGKRRIGFL 184 (339)
T ss_dssp HHHHHHHHTTCCSEEEEECSCC-CT--THHHHHHHTTCCEEEEESCCSSSCCEEECCHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHcCCCCEEEEeCCCC-CH--HHHHHHhcCCCCEEEEeecCCCCCeEEEECHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3445566677888887654322 21 33344566788887773321110 0000000011 1223334543 4444
Q ss_pred CCccccccCcHHHHHHHHHHHHHhCC---CcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHH
Q 019410 184 SKEEYSKIGSVTLTNILKEKLLKEGR---RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 260 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~~~a~~l~~~g~---~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~ 260 (341)
.... .. ....+.+-+.+.+++.+- ...++..+..+.. .|+ ....+++++- .+||+||+ .+...+
T Consensus 185 ~~~~-~~-~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~--~~~-~~~~~ll~~~------~~~~ai~~--~nD~~A 251 (339)
T 3h5o_A 185 GAQL-DE-RVMKRLDGYRAALDAADCRDAGLEWLDPQPSSMQ--MGA-DMLDRALAER------PDCDALFC--CNDDLA 251 (339)
T ss_dssp EESC-CH-HHHHHHHHHHHHHHHTTCCCGGGEEEECSCCCHH--HHH-HHHHHHHHHC------TTCCEEEE--SSHHHH
T ss_pred eCCC-Cc-cHHHHHHHHHHHHHHCCCCCCChheEecCCCCHH--HHH-HHHHHHHcCC------CCCcEEEE--CChHHH
Confidence 3221 11 011222333444444432 1122322222221 233 2344555432 36899996 566788
Q ss_pred HHHHHHHhcCCC----CCeEEEEe
Q 019410 261 AGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 261 aGl~~~~k~~~~----~~rVigVe 280 (341)
.|+..++++.|. ++.|+|++
T Consensus 252 ~g~~~al~~~G~~vP~disvvgfD 275 (339)
T 3h5o_A 252 IGALARSQQLGIAVPERLAIAGFN 275 (339)
T ss_dssp HHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHHHHcCCCCCCCEEEEEEC
Confidence 999999998773 57788765
No 186
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=50.73 E-value=1.2e+02 Score=25.85 Aligned_cols=84 Identities=15% Similarity=0.082 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCC---CCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCC
Q 019410 230 AIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT---LKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSR 306 (341)
Q Consensus 230 ~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~---~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~ 306 (341)
...+++++-+ .++|+||+ .+...+.|+..+++..+ .++.|+|++-.. +..-..+.+
T Consensus 169 ~~~~~l~~~~-----~~~~ai~~--~~d~~a~g~~~al~~~g~vp~di~vvg~d~~~-----------~~~~~~p~l--- 227 (272)
T 3o74_A 169 LMQQLIDDLG-----GLPDALVT--TSYVLLQGVFDTLQARPVDSRQLQLGTFGDNQ-----------LLDFLPLPV--- 227 (272)
T ss_dssp HHHHHHHHHT-----SCCSEEEE--SSHHHHHHHHHHHHTSCGGGCCCEEEEESCCG-----------GGGTSSSCE---
T ss_pred HHHHHHhcCC-----CCCcEEEE--eCchHHHHHHHHHHHcCCCccceEEEEeCChH-----------HHHhcCCCc---
Confidence 4455555432 15899987 46678899999999887 478888876332 111111211
Q ss_pred ceEEeccchHHHHHHHHHHHHHhcCCCC
Q 019410 307 DIVNIQNVSVYMTFKNILMNILMNGKQP 334 (341)
Q Consensus 307 ~iv~v~d~~~~~~~~~~~~~~~~~~~~~ 334 (341)
..|...-.+.....-.++.+.+.+|+.+
T Consensus 228 ttv~~~~~~~g~~a~~~l~~~i~~~~~~ 255 (272)
T 3o74_A 228 NAMAQQHGQIAATALELALAAIEEKRYE 255 (272)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHCCCC
T ss_pred eEEEeCHHHHHHHHHHHHHHHHhCCCCC
Confidence 1334443455555555666666666543
No 187
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=50.54 E-value=81 Score=27.80 Aligned_cols=29 Identities=17% Similarity=0.160 Sum_probs=19.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
..||| |+ +|--|.++|..-.+.|.+++++
T Consensus 28 ~~lVT-Ga-s~gIG~aia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 28 TALVT-GS-SRGLGRAMAEGLAVAGARILIN 56 (271)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEE
Confidence 34444 54 4678888888888888775554
No 188
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=50.49 E-value=4.5 Score=39.05 Aligned_cols=61 Identities=8% Similarity=0.070 Sum_probs=43.9
Q ss_pred ccccccCC-------CCCchHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 92 QRDDLSGM-------QLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 92 ~REDl~~~-------~~ggnK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
+|.||+.. +..|. ...+...+.+. .+ ...|+-+|+ ||||+++|...+..|++.+.+++.+.
T Consensus 19 ~r~d~~~~~~~~~g~~~~gy-~~~l~~~i~~i-~~-~~~v~IiGA--G~~G~~l~~~l~~~g~~ivgfiDdd~ 86 (409)
T 2py6_A 19 MNDSFLAAADALAVDPMFGI-PANVREVIARR-GN-ATRLVILGT--KGFGAHLMNVRHERPCEVIAAVDDFR 86 (409)
T ss_dssp HHHHHHHHHHHHHHCTTTTS-CHHHHHHHHHH-GG-GCEEEEECS--SSTHHHHHSCSSSCSSEEEEEECTTT
T ss_pred HHHHHHHHhhccCCCCCCCh-HHHHHHHHHHh-CC-CCeEEEEeC--CHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence 47777543 34455 66676666665 33 345666776 89999999988888999999998744
No 189
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=50.27 E-value=1.2e+02 Score=27.36 Aligned_cols=32 Identities=9% Similarity=-0.013 Sum_probs=23.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+ +|--|.++|......|.+++++.+.
T Consensus 10 ~vlVT-Ga-s~gIG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 10 TAFVT-GG-ANGVGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp EEEEE-TT-TSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEc-CC-chHHHHHHHHHHHHCCCEEEEEECC
Confidence 34555 54 4678999999988899987776654
No 190
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=49.96 E-value=25 Score=32.65 Aligned_cols=50 Identities=8% Similarity=0.021 Sum_probs=35.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |.-|.+++..|+.+|.+++++.+.... ..+...++.+||+.+
T Consensus 182 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--------~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 182 RKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPT--------EVEQTVIEETKTNYY 231 (366)
T ss_dssp CEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCC--------HHHHHHHHHHTCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccc--------hHHHHHHHHhCCcee
Confidence 45555564 889999999999999976666543200 125677888999866
No 191
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=49.88 E-value=81 Score=26.79 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=45.0
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCC
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVD 304 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~ 304 (341)
.|+.++..+ ...+.||+.+|.-+-+.|+..++- ...||||.+......+.....++.+ +-.++.
T Consensus 56 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~daLlSivq-mP~Gvp 119 (170)
T 1xmp_A 56 FEYAETARE----RGLKVIIAGAGGAAHLPGMVAAKT----NLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVP 119 (170)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHTTC----CSCEEEEEECCTTTTTHHHHHHHHC-CCTTCC
T ss_pred HHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCe
Confidence 455555432 247889999999999999988763 5689999998766556666666665 334444
No 192
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=49.78 E-value=24 Score=32.37 Aligned_cols=50 Identities=18% Similarity=0.089 Sum_probs=35.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ .|.-|.+++..|+.+|.+++++.+... ++..++.+|++.++-
T Consensus 146 ~~VlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----------~~~~~~~lga~~~~~ 195 (340)
T 3gms_A 146 DVLLVNAC-GSAIGHLFAQLSQILNFRLIAVTRNNK-----------HTEELLRLGAAYVID 195 (340)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEESSST-----------THHHHHHHTCSEEEE
T ss_pred CEEEEeCC-ccHHHHHHHHHHHHcCCEEEEEeCCHH-----------HHHHHHhCCCcEEEe
Confidence 55655554 468999999999999998766654321 477788899986553
No 193
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=49.54 E-value=83 Score=27.74 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=45.0
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. +..+++++++.+.+....++..+-.++... ..+..++.++.+ .+|.
T Consensus 21 a~~la~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v---~~~~~~~~~~~g------~iD~ 84 (264)
T 3tfo_A 21 ARELGVAGAKILLGARRQ-------ARIEAIATEIRDAGGTALAQVLDVTDRHSV---AAFAQAAVDTWG------RIDV 84 (264)
T ss_dssp HHHHHHTTCEEEEEESSH-------HHHHHHHHHHHHTTCEEEEEECCTTCHHHH---HHHHHHHHHHHS------CCCE
T ss_pred HHHHHHCCCEEEEEECCH-------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHH---HHHHHHHHHHcC------CCCE
Confidence 344456799999987642 123455666666554455565555555443 345566766663 6999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
+|..+|..
T Consensus 85 lVnnAG~~ 92 (264)
T 3tfo_A 85 LVNNAGVM 92 (264)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999864
No 194
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=49.50 E-value=79 Score=28.25 Aligned_cols=33 Identities=21% Similarity=0.188 Sum_probs=22.7
Q ss_pred CCCeEEEeCCCcch--HHHHHHHHHHHcCCeEEEEEc
Q 019410 120 GADCIITIGGIQSN--HCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 120 g~~~vVt~G~s~GN--hg~AlA~aa~~~Gl~~~ivvp 154 (341)
|...||| |++ |+ -|+++|....+.|.+++++-+
T Consensus 31 gk~~lVT-Gas-g~~GIG~aia~~la~~G~~V~~~~r 65 (293)
T 3grk_A 31 GKRGLIL-GVA-NNRSIAWGIAKAAREAGAELAFTYQ 65 (293)
T ss_dssp TCEEEEE-CCC-SSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEE-cCC-CCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 3344555 544 44 899999988888988766644
No 195
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=49.45 E-value=24 Score=32.18 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=34.3
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
+|+..|+ +|.-|.+++..|+.+|.+.+++.+... ++..++.+||+.++
T Consensus 153 ~VlV~Ga-~G~vG~~~~q~a~~~Ga~vi~~~~~~~-----------~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 153 SVLVTGA-TGGVGGIAVSMLNKRGYDVVASTGNRE-----------AADYLKQLGASEVI 200 (330)
T ss_dssp CEEEEST-TSHHHHHHHHHHHHHTCCEEEEESSSS-----------THHHHHHHTCSEEE
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHH-----------HHHHHHHcCCcEEE
Confidence 4555554 478999999999999998666654321 46777889987543
No 196
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=49.42 E-value=84 Score=27.32 Aligned_cols=31 Identities=19% Similarity=0.094 Sum_probs=21.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+++..|++ |--|.++|......|.+++++-+
T Consensus 31 ~vlITGas-~gIG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 31 VAVVTGAS-RGIGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp EEEESSTT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCC-ChHHHHHHHHHHHCCCEEEEEEC
Confidence 34434544 67899999888888988766654
No 197
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=49.41 E-value=50 Score=29.15 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=24.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
..||| |+ ++--|+++|..-.+.|.+++++-+..
T Consensus 8 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 8 TLFIT-GA-SRGIGLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCEEEEEeccc
Confidence 34555 54 46899999999999999887776654
No 198
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=49.26 E-value=18 Score=33.12 Aligned_cols=50 Identities=14% Similarity=0.014 Sum_probs=35.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ +|.-|.+++..|+.+|.+++++.+. ..++..++.+|++.++-
T Consensus 142 ~~VlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~-----------~~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 142 EIILFHAA-AGGVGSLACQWAKALGAKLIGTVSS-----------PEKAAHAKALGAWETID 191 (325)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEESS-----------HHHHHHHHHHTCSEEEE
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHcCCCEEEe
Confidence 55655553 4789999999999999976666542 12577788899875543
No 199
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=49.25 E-value=1.4e+02 Score=26.30 Aligned_cols=53 Identities=17% Similarity=0.061 Sum_probs=33.7
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
...||| |+ ++--|.++|..-.+.|.+++++-+... .-....+.+|.++..+.-
T Consensus 6 k~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~ 58 (281)
T 3zv4_A 6 EVALIT-GG-ASGLGRALVDRFVAEGARVAVLDKSAE----------RLRELEVAHGGNAVGVVG 58 (281)
T ss_dssp CEEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEESCHH----------HHHHHHHHTBTTEEEEEC
T ss_pred CEEEEE-CC-CcHHHHHHHHHHHHCcCEEEEEeCCHH----------HHHHHHHHcCCcEEEEEc
Confidence 334555 54 468999999999999998887754321 012334456777666543
No 200
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=49.01 E-value=1.5e+02 Score=26.60 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=76.1
Q ss_pred HHHHHH-cCCCeEEEeCCCcchHHHHHHH--HHHHcCCeEEEEEcCCCCCc-CCC-----CC----cchhHHHHHhCCCE
Q 019410 113 MADAVA-QGADCIITIGGIQSNHCRAAAV--AAKYLNLDCYLILRTSKVLV-DQD-----PG----LIGNLLVERLVGAH 179 (341)
Q Consensus 113 l~~A~~-~g~~~vVt~G~s~GNhg~AlA~--aa~~~Gl~~~ivvp~~~~~~-~~~-----~~----~~gn~~~~~~~GAe 179 (341)
+.+... .+.+.|| |...+....+++- .+...+++++.......... .+. +. ...-.+.+..+|.+
T Consensus 65 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~ 142 (364)
T 3lop_A 65 VRDMARVDNPVALL--TVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVT 142 (364)
T ss_dssp HHHHHHHSCEEEEE--CCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhhcCcEEEE--ecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCc
Confidence 334444 3666665 4455667778888 88999998775543221000 000 00 01113344456754
Q ss_pred -EEEE-CCccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcC
Q 019410 180 -IELI-SKEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 254 (341)
Q Consensus 180 -V~~v-~~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~v 254 (341)
|.++ +...|. ....+.+.+.+++.|-.. ..++.+..+. .. +++++.. ..+|.||++
T Consensus 143 ~iaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~----~~~~l~~----~~~d~v~~~- 203 (364)
T 3lop_A 143 RIGVLYQEDALG----KEAITGVERTLKAHALAITAMASYPRNTANV------GP----AVDKLLA----ADVQAIFLG- 203 (364)
T ss_dssp CEEEEEETTHHH----HHHHHHHHHHHHTTTCCCSEEEEECTTSCCC------HH----HHHHHHH----SCCSEEEEE-
T ss_pred eEEEEEeCchhh----HHHHHHHHHHHHHcCCcEEEEEEecCCCccH------HH----HHHHHHh----CCCCEEEEe-
Confidence 4444 222231 122344444555544221 1233322211 11 2233332 358988874
Q ss_pred CchhHHHHHHHHHhcCCCCCeEEEEe
Q 019410 255 GSGGTIAGLSLGSWLGTLKAKVHAFS 280 (341)
Q Consensus 255 GtGGt~aGl~~~~k~~~~~~rVigVe 280 (341)
+.+..+.++...++..+.++++++..
T Consensus 204 ~~~~~a~~~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 204 ATAEPAAQFVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred cCcHHHHHHHHHHHHcCCCCeEEEec
Confidence 56778889999999988888887754
No 201
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=48.88 E-value=1.5e+02 Score=26.57 Aligned_cols=33 Identities=6% Similarity=-0.138 Sum_probs=25.8
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
++|+||+ .+...+.|+..++++.+. ++.|+|++
T Consensus 205 ~~~aI~~--~~d~~a~g~~~al~~~G~~vP~di~vvg~d 241 (350)
T 3h75_A 205 KTQLVWS--ANDEMALGAMQAARELGRKPGTDLLFSGVN 241 (350)
T ss_dssp TEEEEEE--SSHHHHHHHHHHHHHTTCCBTTTBEEEEES
T ss_pred CcCEEEE--CChHHHHHHHHHHHHcCCCCCCCeEEEecC
Confidence 5888876 466788899999998774 57888865
No 202
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=48.83 E-value=28 Score=31.97 Aligned_cols=50 Identities=16% Similarity=0.108 Sum_probs=35.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHc-CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~-Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++|+..|+ |.-|.+.+..|+.+ |.+++++-.. ..++.+++.+||+.++..
T Consensus 173 ~~vlv~Ga--G~vG~~a~qla~~~g~~~Vi~~~~~-----------~~~~~~~~~lGa~~~i~~ 223 (345)
T 3jv7_A 173 STAVVIGV--GGLGHVGIQILRAVSAARVIAVDLD-----------DDRLALAREVGADAAVKS 223 (345)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCCCEEEEEESC-----------HHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCC-----------HHHHHHHHHcCCCEEEcC
Confidence 55665554 78999999999998 5655555332 236888999999865543
No 203
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=48.81 E-value=1.1e+02 Score=26.14 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=22.4
Q ss_pred eEEEeCCCcchHHHHHHHHHHH-cCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~-~Gl~~~ivvp~ 155 (341)
+++..|+ +|--|.++|..-.. .|.+++++.+.
T Consensus 6 ~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 6 VALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred EEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 3443454 47889999888888 89887776553
No 204
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=48.73 E-value=26 Score=31.61 Aligned_cols=62 Identities=16% Similarity=0.023 Sum_probs=41.3
Q ss_pred HHcCCCeEEEeCCCcchHHH-HHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~-AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++.|.++||.+| ...|.|. +.|.-|..+|++++|+.+.......+ .....+..++..++.|+
T Consensus 160 r~~gi~~lvI~G-v~T~~CV~~Ta~dA~~~Gy~V~Vv~DA~as~~~~--~h~~aL~~m~~~~~~vi 222 (264)
T 1nba_A 160 TSNRIDTLIVTG-ATAAGCVRHTVEDAIAKGFRPIIPRETIGDRVPG--VVQWNLYDIDNKFGDVE 222 (264)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHHTCEEEEEGGGEECSSSS--HHHHHHHHHHHHTCEEE
T ss_pred HhCCCCEEEEEe-cCcCCHHHHHHHHHHHCCCEEEEeccccCCCCHH--HHHHHHHHHHhcCcEEe
Confidence 457899999776 5557776 88999999999999887654432111 01223556666666665
No 205
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=48.57 E-value=20 Score=33.21 Aligned_cols=50 Identities=18% Similarity=0.234 Sum_probs=36.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|| .|.-|.+++..|+..|.+++++.+. ..++..++.+|++.++.
T Consensus 169 ~~VlV~Gg-~g~iG~~~~~~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~~~ 218 (353)
T 4dup_A 169 ESVLIHGG-TSGIGTTAIQLARAFGAEVYATAGS-----------TGKCEACERLGAKRGIN 218 (353)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHHTCSEEEE
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCCEEEe
Confidence 55655544 4789999999999999986655432 23577888899986543
No 206
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=48.20 E-value=1.5e+02 Score=26.49 Aligned_cols=151 Identities=19% Similarity=0.148 Sum_probs=80.0
Q ss_pred HHHHHHHHc-CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCC-------CCc--ch--hHHHH-HhCC
Q 019410 111 FLMADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD-------PGL--IG--NLLVE-RLVG 177 (341)
Q Consensus 111 ~ll~~A~~~-g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~-------~~~--~g--n~~~~-~~~G 177 (341)
..+.+...+ +.+.|| |...+....+++-.+...+++.+............. +.. .+ -...+ +.+|
T Consensus 71 ~~~~~l~~~~~v~~ii--G~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g 148 (366)
T 3td9_A 71 NAAARAIDKEKVLAII--GEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLG 148 (366)
T ss_dssp HHHHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhccCCeEEEE--ccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHhcC
Confidence 334444455 477777 344567788888999999999876643221100001 100 01 12233 4467
Q ss_pred C-EEEEE-C-CccccccCcHHHHHHHHHHHHHhCCCcE--EeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEE
Q 019410 178 A-HIELI-S-KEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 252 (341)
Q Consensus 178 A-eV~~v-~-~~~~~~~~~~~~~~~~a~~l~~~g~~~~--~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv 252 (341)
. +|.++ . ...|.. ...+.+.+.+++.|-... .++.+..+ +.....+|.+ ..+|.||+
T Consensus 149 ~~~iaii~~~~~~~~~----~~~~~~~~~~~~~G~~v~~~~~~~~~~d------~~~~~~~l~~--------~~~d~v~~ 210 (366)
T 3td9_A 149 AKRVVVFTDVEQDYSV----GLSNFFINKFTELGGQVKRVFFRSGDQD------FSAQLSVAMS--------FNPDAIYI 210 (366)
T ss_dssp CCEEEEEEETTCHHHH----HHHHHHHHHHHHTTCEEEEEEECTTCCC------CHHHHHHHHH--------TCCSEEEE
T ss_pred CcEEEEEEeCCCcHHH----HHHHHHHHHHHHCCCEEEEEEeCCCCcc------HHHHHHHHHh--------cCCCEEEE
Confidence 5 45555 2 333421 223444455555442211 13332221 1122223321 35898887
Q ss_pred cCCchhHHHHHHHHHhcCCCCCeEEEEeeC
Q 019410 253 ACGSGGTIAGLSLGSWLGTLKAKVHAFSVC 282 (341)
Q Consensus 253 ~vGtGGt~aGl~~~~k~~~~~~rVigVe~~ 282 (341)
.+.+..+.++...++..+.++++++....
T Consensus 211 -~~~~~~a~~~~~~~~~~g~~~~~~~~~~~ 239 (366)
T 3td9_A 211 -TGYYPEIALISRQARQLGFTGYILAGDGA 239 (366)
T ss_dssp -CSCHHHHHHHHHHHHHTTCCSEEEECGGG
T ss_pred -ccchhHHHHHHHHHHHcCCCceEEeeCCc
Confidence 46778888999999999988888876543
No 207
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=48.07 E-value=1.4e+02 Score=26.08 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=22.0
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 9 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 9 VIIT-GS-SNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3444 54 468899999988888988777654
No 208
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=47.90 E-value=1.1e+02 Score=26.80 Aligned_cols=30 Identities=20% Similarity=0.084 Sum_probs=21.0
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 31 ~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 31 AIVT-GA-SRGIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp EEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444 54 467888888888888887766654
No 209
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=47.67 E-value=33 Score=31.74 Aligned_cols=53 Identities=19% Similarity=0.104 Sum_probs=37.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..|+.+|.+.++++..... ...+...++.+||+.++
T Consensus 169 ~~VlV~Ga-~G~vG~~aiqlak~~Ga~vi~~~~~~~~-------~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 169 DSVIQNAS-NSGVGQAVIQIAAALGLRTINVVRDRPD-------IQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEECCCSC-------HHHHHHHHHHTTCSEEE
T ss_pred CEEEEeCC-cCHHHHHHHHHHHHcCCEEEEEecCccc-------hHHHHHHHHhcCCcEEE
Confidence 56665654 4789999999999999998887754321 01245678889997544
No 210
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=47.65 E-value=65 Score=27.33 Aligned_cols=61 Identities=15% Similarity=0.076 Sum_probs=42.3
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEec
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQ 312 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~ 312 (341)
.++.||+.+|.-+.+.|+..++- ...||||.+.+....+.....++.+ ...++.+ -.|.|.
T Consensus 61 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPV-atV~I~ 121 (169)
T 3trh_A 61 GCAVFIAAAGLAAHLAGTIAAHT----LKPVIGVPMAGGSLGGLDALLSTVQ-MPGGVPV-ACTAIG 121 (169)
T ss_dssp TEEEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCSTTTTHHHHHHHHC-CCTTSCC-EECCST
T ss_pred CCcEEEEECChhhhhHHHHHhcC----CCCEEEeecCCCCCCCHHHHHHhhc-CCCCCce-EEEecC
Confidence 47789999999999999998864 4689999998655445565666665 3344432 344444
No 211
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=47.64 E-value=55 Score=30.85 Aligned_cols=99 Identities=12% Similarity=0.019 Sum_probs=49.0
Q ss_pred HHHhCC-CEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEE
Q 019410 172 VERLVG-AHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 250 (341)
Q Consensus 172 ~~~~~G-AeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~I 250 (341)
.++.+| -++.++.+...... ...+++.+.+++.+-....++....||.- ....++.+++.+ ..+| +
T Consensus 25 ~l~~~g~~~~livtd~~~~~~---g~~~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d-~ 91 (386)
T 1rrm_A 25 EVKRRGYQKALIVTDKTLVQC---GVVAKVTDKMDAAGLAWAIYDGVVPNPTI-----TVVKEGLGVFQN----SGAD-Y 91 (386)
T ss_dssp HHHHHTCCEEEEECBHHHHHT---THHHHHHHHHHHTTCEEEEECBCCSSCBH-----HHHHHHHHHHHH----HTCS-E
T ss_pred HHHHcCCCEEEEEECcchhhc---hHHHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCcC-E
Confidence 344456 45666654221111 13455566666544222334433345432 223445555432 2466 5
Q ss_pred EEcCCchhH--HHHHHHHHhcC----------------CCCCeEEEEeeCC
Q 019410 251 VVACGSGGT--IAGLSLGSWLG----------------TLKAKVHAFSVCD 283 (341)
Q Consensus 251 vv~vGtGGt--~aGl~~~~k~~----------------~~~~rVigVe~~g 283 (341)
|+++|+|.. +++.+...... .+.+++|.|..-.
T Consensus 92 IIavGGGsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 92 LIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp EEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred EEEeCChHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 677888776 44544443311 3467899988654
No 212
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=47.59 E-value=30 Score=32.30 Aligned_cols=49 Identities=12% Similarity=0.020 Sum_probs=34.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+.+..|+.+|.+-++.+.... .++.+++.+||+.++
T Consensus 195 ~~VlV~Ga--G~vG~~a~q~a~~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 195 SNVAIFGL--GTVGLAVAEGAKTAGASRIIGIDIDS----------KKYETAKKFGVNEFV 243 (378)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHHTCSCEEEECSCT----------THHHHHHTTTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHcCCcEEE
Confidence 44554564 78999999999999995444443221 268889999997644
No 213
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=47.17 E-value=1.1e+02 Score=26.90 Aligned_cols=57 Identities=12% Similarity=-0.013 Sum_probs=36.7
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
|...||| |+ ++--|.++|..-.+.|.+++++-+..... ......++..|.++..+..
T Consensus 33 gk~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~ 89 (275)
T 4imr_A 33 GRTALVT-GS-SRGIGAAIAEGLAGAGAHVILHGVKPGST-------AAVQQRIIASGGTAQELAG 89 (275)
T ss_dssp TCEEEET-TC-SSHHHHHHHHHHHHTTCEEEEEESSTTTT-------HHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHHHHhcCCeEEEEEe
Confidence 3334444 54 46899999999999999987776543211 2234455667877776654
No 214
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=47.05 E-value=76 Score=27.05 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=46.9
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEe
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNI 311 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v 311 (341)
.|+.++..+ ..+++||+.+|.-+.+.|+..++- ...||||.+......+...+.++.+ ...++.+ -.|.|
T Consensus 57 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPV-atV~I 126 (174)
T 3kuu_A 57 FSFAEQAEA----NGLHVIIAGNGGAAHLPGMLAAKT----LVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPV-GTLAI 126 (174)
T ss_dssp HHHHHHTTT----TTCSEEEEEEESSCCHHHHHHHTC----SSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCC-EECCS
T ss_pred HHHHHHHHh----CCCcEEEEECChhhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCee-EEEEe
Confidence 455554432 347899999999999999998864 4689999998765545566666665 3444432 33444
Q ss_pred c
Q 019410 312 Q 312 (341)
Q Consensus 312 ~ 312 (341)
.
T Consensus 127 ~ 127 (174)
T 3kuu_A 127 G 127 (174)
T ss_dssp S
T ss_pred C
Confidence 4
No 215
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=46.86 E-value=1.3e+02 Score=25.37 Aligned_cols=30 Identities=17% Similarity=0.051 Sum_probs=22.4
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
+++..|+ +|.-|.++|......|.+++++.
T Consensus 7 ~vlItGa-sggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 7 TAIVTGS-SRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 3443454 47899999999999999877763
No 216
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=46.69 E-value=17 Score=31.18 Aligned_cols=62 Identities=13% Similarity=-0.018 Sum_probs=39.3
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++.|.++||.+|-. .|.| .+.|.-|..+|++++++.+.......+. ....+..++..|++|+
T Consensus 122 ~~~gi~~lvi~G~~-t~~CV~~Ta~~a~~~G~~v~v~~Da~~~~~~~~--~~~al~~~~~~~~~v~ 184 (199)
T 3txy_A 122 RRRGITDIVLTGIA-TNIGVESTAREAYENNYNVVVVSDAVSTWSTDA--QTFALTQIFPKLGQVA 184 (199)
T ss_dssp HHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEEBSCHHH--HHHHHHHTHHHHSEEE
T ss_pred HhCCCCEEEEEeec-cCHHHHHHHHHHHHCCCEEEEecHhhcCCCHHH--HHHHHHHHHhhceEEe
Confidence 45689999987644 4555 5788999999999999987544321110 1122444555566664
No 217
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.64 E-value=1.6e+02 Score=26.23 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=21.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+++..|+ +|.-|+++|..-.+.|.+++++.+
T Consensus 28 ~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 28 SVIITGS-SNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 468899999888888888776654
No 218
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=46.60 E-value=97 Score=26.41 Aligned_cols=31 Identities=13% Similarity=-0.003 Sum_probs=22.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
.+|| |+ +|.-|.++|..-.+.|.+++++.+.
T Consensus 8 vlIT-Ga-s~gIG~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 8 ALVT-GA-SRGIGFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 54 4688999999888899887776553
No 219
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=46.40 E-value=1.4e+02 Score=25.62 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=22.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 5 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 5 ALVT-GA-GQGIGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3555 54 468899999988888988776654
No 220
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=46.39 E-value=39 Score=31.93 Aligned_cols=47 Identities=13% Similarity=0.035 Sum_probs=33.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |+.|+++|..++.+|.+ +++..... .+...++.+|++++
T Consensus 173 ~~V~ViGa--G~iG~~aa~~a~~~Ga~-V~~~d~~~----------~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGV--GVAGLQAIATAKRLGAV-VMATDVRA----------ATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEECSCS----------TTHHHHHHTTCEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCE-EEEEeCCH----------HHHHHHHHcCCeEE
Confidence 45666674 89999999999999997 44443221 13556677999865
No 221
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=46.37 E-value=1.4e+02 Score=25.67 Aligned_cols=30 Identities=27% Similarity=0.185 Sum_probs=22.0
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 10 AVIT-GS-SSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 4555 54 468899999888888988776654
No 222
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=46.22 E-value=37 Score=31.39 Aligned_cols=48 Identities=13% Similarity=-0.093 Sum_probs=33.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHH-hCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~-~~GAeV~~ 182 (341)
++|+..|+ |.-|..++..|+.+|.+++++.+.. .++..++ .+||+.++
T Consensus 182 ~~VlV~Ga--G~vG~~a~qlak~~Ga~Vi~~~~~~-----------~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 182 LRGGILGL--GGVGHMGVKIAKAMGHHVTVISSSN-----------KKREEALQDLGADDYV 230 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEESST-----------THHHHHHTTSCCSCEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHHHHHHcCCceee
Confidence 45554563 7899999999999999765554432 1456666 89997543
No 223
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=46.16 E-value=1.4e+02 Score=25.64 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=21.8
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|--|.++|..-.+.|.+++++.+
T Consensus 8 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 8 CVVT-GA-SRGIGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp EEES-ST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEe-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3444 54 467899999988888988776654
No 224
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=45.76 E-value=1.6e+02 Score=25.93 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=23.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..+|| |+ +|.-|.++|....+.|.+++++.+.
T Consensus 20 ~vlVT-Ga-sggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 20 VAIVT-GG-ATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 4789999999999999987776543
No 225
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=45.73 E-value=22 Score=29.31 Aligned_cols=28 Identities=25% Similarity=0.098 Sum_probs=22.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
+.+| .|| |=.|.++|+..++.|++++||
T Consensus 4 dV~I-IGa--GpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAI-IGT--GIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCCEEEE
Confidence 4344 465 789999999999999998888
No 226
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=45.69 E-value=42 Score=28.93 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=42.6
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhc
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDG 298 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~ 298 (341)
.|+.++..+ ...++||+.+|.-+-+.|+..++- ...||||.+......+.....++.+-
T Consensus 58 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlSivqm 116 (183)
T 1o4v_A 58 FEYAKNAEE----RGIEVIIAGAGGAAHLPGMVASIT----HLPVIGVPVKTSTLNGLDSLFSIVQM 116 (183)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHTC
T ss_pred HHHHHHHHh----CCCcEEEEecCcccccHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhcC
Confidence 455555542 347899999999999999998874 46899999987655555555555544
No 227
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=45.66 E-value=79 Score=27.46 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=22.0
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 9 vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 9 VIIT-GG-SSGMGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp EEET-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444 54 467899999998899998776654
No 228
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=45.57 E-value=1.6e+02 Score=26.09 Aligned_cols=156 Identities=9% Similarity=-0.044 Sum_probs=76.0
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-----cCCCC----C--cchh---HHHHHh
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDP----G--LIGN---LLVERL 175 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-----~~~~~----~--~~gn---~~~~~~ 175 (341)
...+.....++.+.||..+ . .+........+...|++++++.....+. ....+ . ..+. ..+++.
T Consensus 94 ~~~i~~l~~~~vdgiIi~~-~-~~~~~~~~~~~~~~~ip~V~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~ 171 (342)
T 1jx6_A 94 SLSLMEALKSKSDYLIFTL-D-TTRHRKFVEHVLDSTNTKLILQNITTPVREWDKHQPFLYVGFDHAEGSRELATEFGKF 171 (342)
T ss_dssp HHHHHHHHHTTCSEEEECC-S-SSTTHHHHHHHHHHCSCEEEEETCCSCBGGGTTSCCSEEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeC-C-hHhHHHHHHHHHHcCCCEEEEecCCCcccccccCCCceEEecCcHHHHHHHHHHHHHH
Confidence 3456666778899988742 2 2211222233456799988886543210 00000 0 0011 122333
Q ss_pred CC--CEEEEECCccccccCcHHHHHHHHHHHHHhCC-CcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEE
Q 019410 176 VG--AHIELISKEEYSKIGSVTLTNILKEKLLKEGR-RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 252 (341)
Q Consensus 176 ~G--AeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~-~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv 252 (341)
+| .+|.++....... ...+.+-..+.+++.+. ....+-.+..+. ..|+ ....+++++- .++|+||+
T Consensus 172 ~Gg~~~I~~i~~~~~~~--~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~ 240 (342)
T 1jx6_A 172 FPKHTYYSVLYFSEGYI--SDVRGDTFIHQVNRDNNFELQSAYYTKATK--QSGY-DAAKASLAKH------PDVDFIYA 240 (342)
T ss_dssp SCTTCEEEEECCSTTHH--HHHHHHHHHHHHHHHHCCEEEEEECCCSSH--HHHH-HHHHHHHHHC------CCCSEEEE
T ss_pred cCCCceEEEEEcCCcch--hhHHHHHHHHHHHhCCCcEEEEEecCCCCH--HHHH-HHHHHHHHhC------CCccEEEE
Confidence 46 5677775321111 11222333444444332 111121222222 2233 2345555432 36899996
Q ss_pred cCCchhHHHHHHHHHhcCCC-CCeEEEEe
Q 019410 253 ACGSGGTIAGLSLGSWLGTL-KAKVHAFS 280 (341)
Q Consensus 253 ~vGtGGt~aGl~~~~k~~~~-~~rVigVe 280 (341)
.+..++.|+..+++..+. ++.|+|++
T Consensus 241 --~nd~~A~g~~~al~~~g~~di~vvg~D 267 (342)
T 1jx6_A 241 --CSTDVALGAVDALAELGREDIMINGWG 267 (342)
T ss_dssp --SSHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred --CCChhHHHHHHHHHHcCCCCcEEEEeC
Confidence 466788899999987664 67777654
No 229
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=45.33 E-value=32 Score=31.80 Aligned_cols=53 Identities=25% Similarity=0.270 Sum_probs=35.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..|+.+|.+.+++.+.... .......++.+||+.++
T Consensus 169 ~~VlV~Ga-~G~vG~~aiqlak~~Ga~vi~~~~~~~~-------~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 169 DWFIQNGG-TSAVGKYASQIGKLLNFNSISVIRDRPN-------LDEVVASLKELGATQVI 221 (364)
T ss_dssp CEEEESCT-TSHHHHHHHHHHHHHTCEEEEEECCCTT-------HHHHHHHHHHHTCSEEE
T ss_pred cEEEECCC-CcHHHHHHHHHHHHCCCEEEEEecCccc-------cHHHHHHHHhcCCeEEE
Confidence 56665554 4789999999999999987777653321 00124566889997544
No 230
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=45.31 E-value=1.5e+02 Score=25.50 Aligned_cols=32 Identities=6% Similarity=-0.124 Sum_probs=24.9
Q ss_pred CCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 247 FDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 247 ~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
+|+||+ .+..++.|+..+++..+. ++.|+|++
T Consensus 202 ~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d 237 (298)
T 3tb6_A 202 PTAILC--YNDEIALKVIDMLREMDLKVPEDMSIVGYD 237 (298)
T ss_dssp CSEEEC--SSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CeEEEE--eCcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 899885 467788899999998774 56777754
No 231
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=45.17 E-value=92 Score=27.61 Aligned_cols=29 Identities=28% Similarity=0.197 Sum_probs=19.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
..||| |+ +|--|.++|..-.+.|.+++++
T Consensus 10 ~vlVT-Ga-s~GIG~aia~~la~~G~~V~~~ 38 (280)
T 3tox_A 10 IAIVT-GA-SSGIGRAAALLFAREGAKVVVT 38 (280)
T ss_dssp EEEES-ST-TSHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEE
Confidence 34454 54 3678888888888888875554
No 232
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=45.11 E-value=61 Score=28.80 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=24.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
..||| |++ +.-|+++|..-.+.|.+++++-+..
T Consensus 11 ~vlVT-Gas-~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 11 TMFIS-GGS-RGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp EEEEE-SCS-SHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred EEEEE-CCC-CHHHHHHHHHHHHCCCEEEEEECCh
Confidence 34555 544 6789999999999999887776654
No 233
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=45.11 E-value=36 Score=31.71 Aligned_cols=49 Identities=12% Similarity=0.067 Sum_probs=34.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+-++.+.... .++..++.+||+.++
T Consensus 197 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 197 STCAVFGL--GCVGLSAIIGCKIAGASRIIAIDING----------EKFPKAKALGATDCL 245 (376)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCG----------GGHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHhCCcEEE
Confidence 45655663 78999999999999995444443221 257788899997543
No 234
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=45.09 E-value=27 Score=32.07 Aligned_cols=47 Identities=19% Similarity=0.044 Sum_probs=32.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHc--CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYL--NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~--Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |.-|.+++..|+.+ |.+++++.+. ..++..++.+||+.+
T Consensus 172 ~~VlV~Ga--G~vG~~aiqlak~~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~v 220 (344)
T 2h6e_A 172 PVVIVNGI--GGLAVYTIQILKALMKNITIVGISRS-----------KKHRDFALELGADYV 220 (344)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCTTCEEEEECSC-----------HHHHHHHHHHTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHhcCCCEEEEEeCC-----------HHHHHHHHHhCCCEE
Confidence 45555664 78999999999999 9974443321 235778888998654
No 235
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=45.05 E-value=1.2e+02 Score=26.35 Aligned_cols=31 Identities=23% Similarity=0.074 Sum_probs=22.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|+++|..-.+.|.+++++-+
T Consensus 22 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 22 RALIT-GA-TKGIGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp EEEET-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34444 54 467899999888888988666654
No 236
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=44.78 E-value=28 Score=32.06 Aligned_cols=49 Identities=12% Similarity=0.081 Sum_probs=33.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHc-CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~-Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ .|.-|.+++..++.. |.+++++.+. ..++..++.+|++.+.
T Consensus 172 ~~vlV~Ga-gg~iG~~~~~~a~~~~Ga~Vi~~~~~-----------~~~~~~~~~~g~~~~~ 221 (347)
T 1jvb_A 172 KTLLVVGA-GGGLGTMAVQIAKAVSGATIIGVDVR-----------EEAVEAAKRAGADYVI 221 (347)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHHTCCEEEEEESS-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CccHHHHHHHHHHHcCCCeEEEEcCC-----------HHHHHHHHHhCCCEEe
Confidence 45555554 468999999999999 9985555432 1246677888987554
No 237
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=44.52 E-value=35 Score=32.20 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=35.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ |.-|.+.+..|+.+|.+-++.+... ..++.+++.+||+.++-
T Consensus 215 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 215 DNVVILGG--GPIGLAAVAILKHAGASKVILSEPS----------EVRRNLAKELGADHVID 264 (404)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSC----------HHHHHHHHHHTCSEEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHcCCCEEEc
Confidence 45655664 7899999999999999545554322 23688889999986543
No 238
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=44.38 E-value=43 Score=28.81 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCC
Q 019410 232 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVD 304 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~ 304 (341)
.|+.++..+ ...++||+.+|.-+.+.|+..++- ...||||.+......+.....++.+ +-.++.
T Consensus 66 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlSivq-mP~Gvp 129 (182)
T 1u11_A 66 ADYARTAAE----RGLNVIIAGAGGAAHLPGMCAAWT----RLPVLGVPVESRALKGMDSLLSIVQ-MPGGVP 129 (182)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHC-CCTTSC
T ss_pred HHHHHHHHh----CCCcEEEEecCchhhhHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCc
Confidence 455555432 247899999999999999998874 4689999998766556666666665 334444
No 239
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=44.35 E-value=1.7e+02 Score=25.99 Aligned_cols=155 Identities=14% Similarity=0.094 Sum_probs=77.2
Q ss_pred HHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC----cCCCCCcchh--HHHHHhCCC-EEEEE
Q 019410 111 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGA-HIELI 183 (341)
Q Consensus 111 ~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~----~~~~~~~~gn--~~~~~~~GA-eV~~v 183 (341)
..++....++.+.||..+.. .+ ...+...++..|++++++-...... ...+....+. .+.+...|- +|.++
T Consensus 110 ~~~~~l~~~~vdgiIi~~~~-~~-~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i 187 (338)
T 3dbi_A 110 QAIQYLLDLRCDAIMIYPRF-LS-VDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFL 187 (338)
T ss_dssp HHHHHHHHTTCSEEEECCSS-SC-HHHHHHHHHHCSSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEeCCC-CC-hHHHHHHHHcCCCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHCCCCEEEEE
Confidence 34566667788988865432 22 2445666778888877664322110 0000000011 222333454 46555
Q ss_pred CCccccccCcHHHHHHHHHHHHHhCCC---cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHH
Q 019410 184 SKEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 260 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~~~a~~l~~~g~~---~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~ 260 (341)
....... ....+.+-+.+.+++.+.. .+++. +..+. ..|+ ....+++++ ..++|+||+ .+..++
T Consensus 188 ~~~~~~~-~~~~R~~Gf~~al~~~g~~~~~~~~~~-~~~~~--~~~~-~~~~~ll~~------~~~~~ai~~--~nd~~A 254 (338)
T 3dbi_A 188 TGSMDSP-TSIERLAGYKDALAQHGIALNEKLIAN-GKWTP--ASGA-EGVEMLLER------GAKFSALVA--SNDDMA 254 (338)
T ss_dssp CCCTTCH-HHHHHHHHHHHHHHHTTCCCCGGGEEC-CCSSH--HHHH-HHHHHHHHT------TCCCSEEEE--SSHHHH
T ss_pred eCCCCCc-cHHHHHHHHHHHHHHCCCCCCcceEEe-CCCCH--HHHH-HHHHHHHcC------CCCCeEEEE--CChHHH
Confidence 4321100 1112223344445554311 11222 22222 1233 234455443 246999997 566788
Q ss_pred HHHHHHHhcCCC----CCeEEEEe
Q 019410 261 AGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 261 aGl~~~~k~~~~----~~rVigVe 280 (341)
.|+..+++..|. ++.|+|++
T Consensus 255 ~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 255 IGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp HHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHHHHHHcCCCCCCCeEEEEEC
Confidence 899999998773 67899987
No 240
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=44.28 E-value=1.4e+02 Score=25.07 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=21.6
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
++..|+ +|--|.++|....+.|.++++..
T Consensus 4 vlVTGa-sggiG~~la~~l~~~G~~v~~~~ 32 (244)
T 1edo_A 4 VVVTGA-SRGIGKAIALSLGKAGCKVLVNY 32 (244)
T ss_dssp EEETTC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 333354 47899999999999999877754
No 241
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=44.27 E-value=1.6e+02 Score=25.52 Aligned_cols=31 Identities=32% Similarity=0.228 Sum_probs=22.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 15 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 15 VVLIT-GG-GSGLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478899999888888988776654
No 242
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=44.17 E-value=1.6e+02 Score=25.64 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=24.8
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
+...||| |++ |--|.++|..-.+.|.+++++.+.
T Consensus 12 ~k~vlIT-Gas-~GIG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVT-GGN-KGIGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEES-SCS-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEe-cCC-chHHHHHHHHHHHCCCEEEEEeCC
Confidence 3334454 544 678999999999999988777664
No 243
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=43.88 E-value=40 Score=31.34 Aligned_cols=49 Identities=18% Similarity=0.041 Sum_probs=34.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|..++..|+.+|.+-++.+.... .++.+++.+||+.++
T Consensus 193 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 193 STCAVFGL--GGVGFSAIVGCKAAGASRIIGVGTHK----------DKFPKAIELGATECL 241 (373)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCSEEEEECSCG----------GGHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEECCCH----------HHHHHHHHcCCcEEE
Confidence 55655663 78999999999999995444443221 257788999997543
No 244
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=43.81 E-value=78 Score=25.63 Aligned_cols=43 Identities=21% Similarity=0.140 Sum_probs=20.4
Q ss_pred HhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 019410 206 KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGS 256 (341)
Q Consensus 206 ~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGt 256 (341)
+.|...+.+|...+++. ......+..++.++. +. |.+|-++|+
T Consensus 65 ~~G~~~~~i~~Dv~~~~-~~~v~~~~~~i~~~~------G~-dVLVnnAgg 107 (157)
T 3gxh_A 65 QAGMDYVYIPVDWQNPK-VEDVEAFFAAMDQHK------GK-DVLVHCLAN 107 (157)
T ss_dssp HTTCEEEECCCCTTSCC-HHHHHHHHHHHHHTT------TS-CEEEECSBS
T ss_pred HcCCeEEEecCCCCCCC-HHHHHHHHHHHHhcC------CC-CEEEECCCC
Confidence 33434455665544441 112223334444332 24 888888765
No 245
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=43.76 E-value=4.2e+02 Score=32.44 Aligned_cols=34 Identities=3% Similarity=-0.071 Sum_probs=26.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
++++..||++|+-|+++|..-...|.++++.-+.
T Consensus 2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~ 2170 (3089)
T 3zen_D 2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSR 2170 (3089)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444447777779999999999999998887654
No 246
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=43.66 E-value=1.8e+02 Score=26.11 Aligned_cols=157 Identities=12% Similarity=-0.009 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC----cCCCCCcchh--HHHHHhCCC-EEEE
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGA-HIEL 182 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~----~~~~~~~~gn--~~~~~~~GA-eV~~ 182 (341)
..++.....++.+.||..+... +. .....+...|++++++-...... +..+....+. .+.+...|- +|.+
T Consensus 116 ~~~~~~l~~~~vdGiI~~~~~~-~~--~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~r~I~~ 192 (355)
T 3e3m_A 116 EQLVETMLRRRPEAMVLSYDGH-TE--QTIRLLQRASIPIVEIWEKPAHPIGHTVGFSNERAAYDMTNALLARGFRKIVF 192 (355)
T ss_dssp HHHHHHHHHTCCSEEEEECSCC-CH--HHHHHHHHCCSCEEEESSCCSSCSSEEEECCHHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCC-CH--HHHHHHHhCCCCEEEECCccCCCCCCEEEeChHHHHHHHHHHHHHCCCCeEEE
Confidence 3445666677888888764322 21 33345567899988773221110 0000000011 222333564 3544
Q ss_pred ECCccccccCcHHHHHHHHHHHHHhCCC---cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhH
Q 019410 183 ISKEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 259 (341)
Q Consensus 183 v~~~~~~~~~~~~~~~~~a~~l~~~g~~---~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt 259 (341)
+............+.+-+.+.+++.+.. ...+..+..+. ..|+ ....+++++- .+||+||+ .+..+
T Consensus 193 i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~--~nD~~ 261 (355)
T 3e3m_A 193 LGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLSI--EDGV-AAAELILQEY------PDTDCIFC--VSDMP 261 (355)
T ss_dssp EEESSCTTSHHHHHHHHHHHHHHHTTSCSCCEEEESCSSCCH--HHHH-HHHHHHHHHC------TTCCEEEE--SSHHH
T ss_pred EccCcccChhHHHHHHHHHHHHHHCCcCCCccEEEecCCCCH--HHHH-HHHHHHHcCC------CCCcEEEE--CChHH
Confidence 4321110000112333444445554321 12222222221 2243 2345555442 36999997 56778
Q ss_pred HHHHHHHHhcCCC----CCeEEEEe
Q 019410 260 IAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 260 ~aGl~~~~k~~~~----~~rVigVe 280 (341)
+.|+..+++..|. ++.|+|++
T Consensus 262 A~g~~~al~~~G~~vP~disvigfD 286 (355)
T 3e3m_A 262 AFGLLSRLKSIGVAVPEQVSVVGFG 286 (355)
T ss_dssp HHHHHHHHHHHTCCTTTTCEEECSS
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEC
Confidence 8899999988763 66777754
No 247
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=43.52 E-value=32 Score=28.63 Aligned_cols=47 Identities=13% Similarity=0.080 Sum_probs=31.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
++|+..|+ .|.-|.+++..++..|.+++++.+. ..+...++.+|++.
T Consensus 40 ~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~-----------~~~~~~~~~~g~~~ 86 (198)
T 1pqw_A 40 ERVLIHSA-TGGVGMAAVSIAKMIGARIYTTAGS-----------DAKREMLSRLGVEY 86 (198)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHHTCEEEEEESS-----------HHHHHHHHTTCCSE
T ss_pred CEEEEeeC-CChHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHHcCCCE
Confidence 45555553 4789999999999999876655432 12355566677754
No 248
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=43.51 E-value=26 Score=32.66 Aligned_cols=50 Identities=6% Similarity=-0.047 Sum_probs=35.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..|+ +|.-|.+++..|+.+|.+++++.+. ..++..++.+|++.++-
T Consensus 165 ~~VlV~Ga-~G~iG~~~~q~a~~~Ga~Vi~~~~~-----------~~~~~~~~~~Ga~~~~~ 214 (362)
T 2c0c_A 165 KKVLVTAA-AGGTGQFAMQLSKKAKCHVIGTCSS-----------DEKSAFLKSLGCDRPIN 214 (362)
T ss_dssp CEEEETTT-TBTTHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTTCSEEEE
T ss_pred CEEEEeCC-CcHHHHHHHHHHHhCCCEEEEEECC-----------HHHHHHHHHcCCcEEEe
Confidence 45655553 4789999999999999986655432 12577788899986543
No 249
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=43.37 E-value=1.2e+02 Score=26.31 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=21.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 12 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 12 SVVVT-GG-TKGIGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 33444 54 467888988888888887766644
No 250
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=42.89 E-value=44 Score=31.06 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=33.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+-++.+... ..++.+++.+||+.++
T Consensus 194 ~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~----------~~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 194 STCAVFGL--GAVGLAAVMGCHSAGAKRIIAVDLN----------PDKFEKAKVFGATDFV 242 (374)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSC----------GGGHHHHHHTTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCC----------HHHHHHHHHhCCceEE
Confidence 45555663 7899999999999999544444322 1257788899997543
No 251
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=42.75 E-value=53 Score=30.51 Aligned_cols=48 Identities=19% Similarity=0.032 Sum_probs=32.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHH-hCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~-~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|.+++++.+.. .++..++ .+||+.++
T Consensus 189 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 189 KHIGIVGL--GGLGHVAVKFAKAFGSKVTVISTSP-----------SKKEEALKNFGADSFL 237 (366)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCG-----------GGHHHHHHTSCCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHhcCCceEE
Confidence 45554563 7899999999999999765554322 1355555 89997543
No 252
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=42.71 E-value=32 Score=29.35 Aligned_cols=40 Identities=18% Similarity=0.081 Sum_probs=30.6
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCC
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
++.|.++||.+|-. .|.| .+.|..|..+|++++++.+...
T Consensus 109 ~~~gi~~lvi~G~~-T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (198)
T 3mcw_A 109 RANGWLELVVAGVS-TSNSVEATVRMAGNLGFAVCLAEDGCF 149 (198)
T ss_dssp HHHTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HcCCCCeEEEEEcC-cChHHHHHHHHHHHCCCEEEEeCcccc
Confidence 45689999987644 4555 5888899999999999977544
No 253
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=42.59 E-value=1.1e+02 Score=27.00 Aligned_cols=32 Identities=22% Similarity=0.178 Sum_probs=19.9
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
|...||| |++ |--|.++|..-.+.|.+++++-
T Consensus 33 gk~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~ 64 (281)
T 4dry_A 33 GRIALVT-GGG-TGVGRGIAQALSAEGYSVVITG 64 (281)
T ss_dssp -CEEEET-TTT-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 3334454 543 6778888877777777755554
No 254
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=42.33 E-value=42 Score=31.25 Aligned_cols=48 Identities=13% Similarity=0.116 Sum_probs=34.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ .|.-|.+++..|+.+|.+++++. . . .+...++.+||+.++
T Consensus 185 ~~VlV~Ga-~G~vG~~~~qla~~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~v~ 232 (375)
T 2vn8_A 185 KRVLILGA-SGGVGTFAIQVMKAWDAHVTAVC-S-Q----------DASELVRKLGADDVI 232 (375)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEE-C-G----------GGHHHHHHTTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHhCCCEEEEEe-C-h----------HHHHHHHHcCCCEEE
Confidence 45655553 47899999999999999765543 2 1 146778899997654
No 255
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=42.15 E-value=27 Score=32.30 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=25.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
++|+..|| |-.|+.+|.+|+++|++++++-+
T Consensus 2 K~I~ilGg--g~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGG--KLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeC
Confidence 45665675 56899999999999999998854
No 256
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=41.91 E-value=47 Score=24.52 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=30.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcC-CeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~G-l~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
.|+..|+ |..|.+++......| .+++++-+.. .+...++..|.+++..
T Consensus 7 ~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~-----------~~~~~~~~~~~~~~~~ 55 (118)
T 3ic5_A 7 NICVVGA--GKIGQMIAALLKTSSNYSVTVADHDL-----------AALAVLNRMGVATKQV 55 (118)
T ss_dssp EEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCH-----------HHHHHHHTTTCEEEEC
T ss_pred eEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCH-----------HHHHHHHhCCCcEEEe
Confidence 3444564 899999999999999 6665554321 1344444566665544
No 257
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=41.80 E-value=33 Score=31.62 Aligned_cols=46 Identities=17% Similarity=0.111 Sum_probs=34.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
++|+..|+ .|.-|.+++..|+.+|.+++++ .. ..++..++.+|++.
T Consensus 152 ~~VlV~Ga-~g~iG~~~~q~a~~~Ga~Vi~~-~~-----------~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 152 QTVLIQGG-GGGVGHVAIQIALARGARVFAT-AR-----------GSDLEYVRDLGATP 197 (343)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEE-EC-----------HHHHHHHHHHTSEE
T ss_pred CEEEEecC-CCHHHHHHHHHHHHCCCEEEEE-eC-----------HHHHHHHHHcCCCE
Confidence 55655553 3789999999999999986666 32 12577889999998
No 258
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=41.60 E-value=1.8e+02 Score=25.44 Aligned_cols=32 Identities=13% Similarity=0.026 Sum_probs=22.9
Q ss_pred CeEEEeCCCc-chHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~-GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+++ |.-|+++|......|.+++++.+
T Consensus 23 ~vlVT-Gas~~~gIG~~ia~~l~~~G~~V~~~~r 55 (285)
T 2p91_A 23 RALIT-GVANERSIAYGIAKSFHREGAQLAFTYA 55 (285)
T ss_dssp EEEEC-CCSSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCCCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 34454 6552 67899999888888988776654
No 259
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=41.45 E-value=1.8e+02 Score=25.45 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=21.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
..||| |+ +|.-|+++|....+.|.+++++-
T Consensus 31 ~vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 31 IALVT-GG-SRGIGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEe-CC-CChHHHHHHHHHHHCCCEEEEEe
Confidence 34555 54 47889999988888888766654
No 260
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=41.40 E-value=1.7e+02 Score=25.16 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=27.2
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEee
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 281 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~ 281 (341)
.++|+||+ .+..++.|+..+++..+. ++.|+|++-
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 223 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDN 223 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESC
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecC
Confidence 46899986 666788899999988663 678888763
No 261
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=41.37 E-value=44 Score=31.03 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=33.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..| + |.-|.+++..|+.+|.+-++.+.... .++..++.+||+.++
T Consensus 193 ~~VlV~G-a-G~vG~~a~qla~~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 193 STCAVFG-L-GGVGLSVIMGCKAAGAARIIGVDINK----------DKFAKAKEVGATECV 241 (374)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSCG----------GGHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHhCCceEe
Confidence 4555566 3 78999999999999995444443221 257788899997443
No 262
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=41.28 E-value=1.7e+02 Score=25.08 Aligned_cols=164 Identities=9% Similarity=-0.066 Sum_probs=81.6
Q ss_pred HHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC---cCCCCCcchh--HHHHHh--CCC-EE
Q 019410 109 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL---VDQDPGLIGN--LLVERL--VGA-HI 180 (341)
Q Consensus 109 l~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~---~~~~~~~~gn--~~~~~~--~GA-eV 180 (341)
....++.+..++.+.||..+ ............+...|++++++-...... ...+....+. .+.+.. .|. +|
T Consensus 50 ~~~~~~~l~~~~vdgiIi~~-~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~i 128 (291)
T 3l49_A 50 QVSQIQTLIAQKPDAIIEQL-GNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKGNV 128 (291)
T ss_dssp HHHHHHHHHHHCCSEEEEES-SCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCCEEEEeC-CChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCceE
Confidence 34556777778899998664 333445556667778899987774322110 0000000011 122222 564 56
Q ss_pred EEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCC---CCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCch
Q 019410 181 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVG---GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 257 (341)
Q Consensus 181 ~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g---~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtG 257 (341)
.++....... ....+.+.+.+.+++.+ +.-++... ..+.....++ ....+++++-++ ..++|+||+ .+.
T Consensus 129 ~~i~~~~~~~-~~~~R~~gf~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~---~~~~~ai~~--~~d 200 (291)
T 3l49_A 129 LVFNGFYSVP-VCKIRYDQMKYVLEAFP-DVKIIEPELRDVIPNTIQSAY-SNVTDMLTKYPN---EGDVGAIWA--CWD 200 (291)
T ss_dssp EEECSCTTSH-HHHHHHHHHHHHHHTCT-TEEECSSCBCCCSSSHHHHHH-HHHHHHHHHCCS---TTSCCEEEE--SSH
T ss_pred EEEeCCCCCc-hHHHHHHHHHHHHHHCC-CCEEEeeeccCCCCCCHHHHH-HHHHHHHHhCCC---cCCcCEEEE--CCC
Confidence 6665321100 11122233344444331 22122211 1111112233 344555544210 016899986 467
Q ss_pred hHHHHHHHHHhcCCC-CCeEEEEee
Q 019410 258 GTIAGLSLGSWLGTL-KAKVHAFSV 281 (341)
Q Consensus 258 Gt~aGl~~~~k~~~~-~~rVigVe~ 281 (341)
..+.|+..++++.+. ++.|+|++-
T Consensus 201 ~~a~g~~~al~~~g~~di~vvg~d~ 225 (291)
T 3l49_A 201 VPMIGATQALQAAGRTDIRTYGVDG 225 (291)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEEEEC
T ss_pred chHHHHHHHHHHcCCCCeEEEEecC
Confidence 888999999998876 788888753
No 263
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=41.25 E-value=1.9e+02 Score=25.55 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=22.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
..||| |++ |--|.++|..-.+.|.+++++.
T Consensus 11 ~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 11 VALVT-GAA-KRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp EEEET-TCS-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEE-CCC-chHHHHHHHHHHHCCCeEEEEc
Confidence 34444 544 6789999999999999877765
No 264
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=41.08 E-value=1.1e+02 Score=26.69 Aligned_cols=78 Identities=12% Similarity=-0.078 Sum_probs=49.8
Q ss_pred hHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC-CCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 104 NKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT-SKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 104 nK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~-~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
|-..-++..++.|.+.|.+.||.+ +++|-++..++-.. .| +.++|.-. ......+..-...+.+.++..|.+|+.
T Consensus 35 NT~~tl~la~era~e~~Ik~iVVA-SssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t 110 (206)
T 1t57_A 35 NTERVLELVGERADQLGIRNFVVA-SVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALLERGVNVYA 110 (206)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEEC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEE-eCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEE
Confidence 456677888899999999999876 56778876555422 45 66666421 111001111124578889999999987
Q ss_pred ECC
Q 019410 183 ISK 185 (341)
Q Consensus 183 v~~ 185 (341)
..-
T Consensus 111 ~tH 113 (206)
T 1t57_A 111 GSH 113 (206)
T ss_dssp CSC
T ss_pred eec
Confidence 664
No 265
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=41.06 E-value=26 Score=30.10 Aligned_cols=59 Identities=10% Similarity=0.053 Sum_probs=39.9
Q ss_pred CCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 121 ADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
.++||.+|-. .|.| .+.|.-|..+|++++++.+.......+ .....+..++..|++|+.
T Consensus 101 i~~lvi~G~~-T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~~ 160 (199)
T 2b34_A 101 VQNVILVGIE-AHVCVLQTTYDLLERGLNVHVVVDAVSSRSHT--DRHFAFKQMEQAGAILTT 160 (199)
T ss_dssp CSEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred CCEEEEEEEe-cCHHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHCCCEEec
Confidence 7888877644 4555 588999999999999998765432111 012346677778988763
No 266
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=40.99 E-value=32 Score=31.86 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=34.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++..|.+++++.+.. .++..++.+|++.+.
T Consensus 164 ~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 164 DYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQ-----------KKLQMAEKLGAAAGF 212 (354)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCcEEE
Confidence 45555554 47899999999999999866654321 246667888987544
No 267
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=40.67 E-value=59 Score=27.53 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=36.6
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcc
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGL 299 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~ 299 (341)
.++.||+.+|.-+.+.|+..++- ...||||.+......+...+.++.+-.
T Consensus 60 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vqmp 109 (166)
T 3oow_A 60 GLKVIIAGAGGAAHLPGMVAAKT----TLPVLGVPVKSSTLNGQDSLLSIVQMP 109 (166)
T ss_dssp TCCEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCTTTTTHHHHHHHHTCC
T ss_pred CCcEEEEECCcchhhHHHHHhcc----CCCEEEeecCcCCCCCHHHHHHHhcCC
Confidence 47899999999999999998864 468999998765444445455555433
No 268
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=40.67 E-value=1.7e+02 Score=24.78 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=42.6
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. ...+.+.+++...+....++..+-.++.. ...+..++.++.. .+|.
T Consensus 28 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~------~~d~ 91 (255)
T 1fmc_A 28 AITFATAGASVVVSDINA-------DAANHVVDEIQQLGGQAFACRCDITSEQE---LSALADFAISKLG------KVDI 91 (255)
T ss_dssp HHHHHTTTCEEEEEESCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHH---HHHHHHHHHHHHS------SCCE
T ss_pred HHHHHHCCCEEEEEcCCH-------HHHHHHHHHHHHhCCceEEEEcCCCCHHH---HHHHHHHHHHhcC------CCCE
Confidence 344455699999887642 11234445555444455556555445543 3345566666653 6999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
||..+|..
T Consensus 92 vi~~Ag~~ 99 (255)
T 1fmc_A 92 LVNNAGGG 99 (255)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999864
No 269
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=40.44 E-value=33 Score=31.80 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=34.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++..|.+++++.+.. .++..++.+|++.++
T Consensus 172 ~~vlV~Ga-sggiG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 172 ESVLVHGA-SGGVGLAACQIARAYGLKILGTAGTE-----------EGQKIVLQNGAHEVF 220 (351)
T ss_dssp CEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCh-----------hHHHHHHHcCCCEEE
Confidence 45555554 47899999999999999866654321 246678889987543
No 270
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=40.27 E-value=65 Score=27.94 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=27.7
Q ss_pred CEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCC
Q 019410 248 DDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 285 (341)
Q Consensus 248 D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~ 285 (341)
..+=+++|+|....-++...+..++..+|+||+.....
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR 121 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH
Confidence 35667888888877666654445678899999987653
No 271
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=40.04 E-value=1.9e+02 Score=25.31 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=22.9
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |+ +|--|.++|..-.+.|.+++++.+.
T Consensus 23 ~k~~lVT-Ga-s~gIG~aia~~L~~~G~~V~~~~r~ 56 (288)
T 2x9g_A 23 APAAVVT-GA-AKRIGRAIAVKLHQTGYRVVIHYHN 56 (288)
T ss_dssp CCEEEET-TC-SSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCEEEEe-CC-CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3334454 54 4678888888888888877666543
No 272
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=39.75 E-value=87 Score=29.35 Aligned_cols=77 Identities=16% Similarity=0.057 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhH--HHHHHHHHhcC----
Q 019410 197 TNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT--IAGLSLGSWLG---- 270 (341)
Q Consensus 197 ~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt--~aGl~~~~k~~---- 270 (341)
.+++.+.+++.+-....++....||.- ....++.+++.+ .+.| +|+++|+|.. +++.+......
T Consensus 58 ~~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d-~IIavGGGsv~D~AK~iA~~~~~~~~~ 127 (371)
T 1o2d_A 58 LDDLKKLLDETEISYEIFDEVEENPSF-----DNVMKAVERYRN----DSFD-FVVGLGGGSPMDFAKAVAVLLKEKDLS 127 (371)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSSCBH-----HHHHHHHHHHTT----SCCS-EEEEEESHHHHHHHHHHHHHTTSTTCC
T ss_pred HHHHHHHHHHcCCeEEEeCCccCCCCH-----HHHHHHHHHHHh----cCCC-EEEEeCChHHHHHHHHHHHHHhCCCCC
Confidence 345555565544222334433334432 234566666653 3466 4667888766 44444443221
Q ss_pred ----------CCCCeEEEEeeCC
Q 019410 271 ----------TLKAKVHAFSVCD 283 (341)
Q Consensus 271 ----------~~~~rVigVe~~g 283 (341)
.+.++++.|..-.
T Consensus 128 ~~~~~~~~~~~~~~p~i~IPTTa 150 (371)
T 1o2d_A 128 VEDLYDREKVKHWLPVVEIPTTA 150 (371)
T ss_dssp SGGGGCGGGCCCCCCEEEEECSS
T ss_pred HHHHhcccCCCCCCeEEEEeCCC
Confidence 0567888888653
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=39.74 E-value=14 Score=38.06 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=28.5
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCC
Q 019410 249 DIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 284 (341)
Q Consensus 249 ~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~ 284 (341)
.+++++|+|-+..-...+.+..+.++||++||....
T Consensus 361 VldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 361 LMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred EEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 456788888887777777777788899999998653
No 274
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=39.66 E-value=1.8e+02 Score=24.96 Aligned_cols=32 Identities=25% Similarity=0.147 Sum_probs=22.1
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| ||+ |--|.++|....+.|.+++++-+
T Consensus 8 k~~lVT-Gas-~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIIT-GAS-QGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEE-STT-SHHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEE-CCC-cHHHHHHHHHHHHCCCEEEEEEC
Confidence 334555 543 67888888888888887766644
No 275
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=39.47 E-value=41 Score=30.68 Aligned_cols=49 Identities=6% Similarity=-0.046 Sum_probs=33.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHH-hCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~-~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..|+.+|.+++++.++ ..++..++ .+|++.+.
T Consensus 157 ~~vlI~Ga-~g~iG~~~~~~a~~~G~~V~~~~~~-----------~~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 157 ETVYVSAA-SGAVGQLVGQLAKMMGCYVVGSAGS-----------KEKVDLLKTKFGFDDAF 206 (345)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTSCCSEEE
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHHcCCceEE
Confidence 45555553 4789999999999999976555432 12466776 69986543
No 276
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=39.41 E-value=41 Score=30.58 Aligned_cols=49 Identities=6% Similarity=0.041 Sum_probs=33.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++..|.+++++.+.. .++..++.+|++.+.
T Consensus 147 ~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 147 ETVLVSAA-AGAVGSVVGQIAKLKGCKVVGAAGSD-----------EKIAYLKQIGFDAAF 195 (333)
T ss_dssp CEEEEEST-TBHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEecC-CCcHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCcEEE
Confidence 44554554 47899999999999999766654321 245666888986443
No 277
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=39.06 E-value=96 Score=26.71 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=25.0
Q ss_pred CeEEEeCCC-cchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s-~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |++ ++.-|.++|....+.|.+++++.+.
T Consensus 16 ~vlIT-Ga~~~~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 16 RILLT-GLLSNRSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp EEEEC-CCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEe-CCCCCCcHHHHHHHHHHHcCCCEEEEecc
Confidence 34454 553 3679999999999999998887665
No 278
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=39.06 E-value=1.8e+02 Score=24.74 Aligned_cols=33 Identities=6% Similarity=0.004 Sum_probs=25.9
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
++|+||+. +...+.|+..+++..+. ++.|+|++
T Consensus 177 ~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 213 (277)
T 3e61_A 177 SIDSIICS--NDLLAINVLGIVQRYHFKVPAEIQIIGYD 213 (277)
T ss_dssp TCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCCEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEeeC
Confidence 68999975 66788899999998764 56777755
No 279
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=39.06 E-value=84 Score=29.10 Aligned_cols=61 Identities=15% Similarity=0.018 Sum_probs=35.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
..||| |+ ++--|.++|....+.|.+++++.+......+...........++..|.++..+.
T Consensus 47 ~vlVT-Ga-s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~ 107 (346)
T 3kvo_A 47 TVFIT-GA-SRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107 (346)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEe-CC-ChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE
Confidence 34555 54 468899999999999999888876543211000000112344555666665554
No 280
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=39.05 E-value=1.9e+02 Score=24.99 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=21.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |++ |--|+++|....+.|.+++++.+
T Consensus 13 ~~lVT-Gas-~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVIT-GGA-RRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEET-TCS-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence 34444 544 67899999888888887776654
No 281
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=38.93 E-value=1.9e+02 Score=25.03 Aligned_cols=34 Identities=9% Similarity=0.092 Sum_probs=26.2
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
.++|+||+. +..++.|+..+++..+. ++.|+|++
T Consensus 196 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D 233 (301)
T 3miz_A 196 DRPTAIMSG--NDEMAIQIYIAAMALGLRIPQDVSIVGFD 233 (301)
T ss_dssp TCCSEEEES--SHHHHHHHHHHHHTTTCCHHHHCEEECSB
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCCeeEEEeC
Confidence 468999874 56788899999998875 45677755
No 282
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=38.86 E-value=78 Score=26.63 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC-CCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT-SKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~-~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
.++++.+.+.|++.|+........+...+...++.+|+++.+-+.. +++ ...+..+...|++.+.+..
T Consensus 67 ~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~--------~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 67 HFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDL--------PARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSH--------HHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHHcCCCEEEEcC
Confidence 3457778888888887654332245567777788889887763221 111 1235566667888776653
No 283
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=38.83 E-value=67 Score=27.83 Aligned_cols=33 Identities=15% Similarity=-0.043 Sum_probs=24.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
..||| |++ |--|.++|..-.+.|.+++++-+..
T Consensus 9 ~~lVT-Gas-~gIG~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 9 VFIVT-GAS-SGLGAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp EEEEE-STT-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34555 544 6889999999999999988776543
No 284
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=38.82 E-value=91 Score=26.58 Aligned_cols=40 Identities=10% Similarity=0.022 Sum_probs=18.9
Q ss_pred HHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 111 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 111 ~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
.+.....++|.+.+++ + -.......+....+..|.++..+
T Consensus 20 ~~a~~l~~~G~~v~~~-~-r~~~~~~~~~~~~~~~~~~~~~~ 59 (247)
T 3lyl_A 20 EVAHALASKGATVVGT-A-TSQASAEKFENSMKEKGFKARGL 59 (247)
T ss_dssp HHHHHHHHTTCEEEEE-E-SSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCEEEEE-e-CCHHHHHHHHHHHHhcCCceEEE
Confidence 3444445667765444 2 22233444444444555554443
No 285
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=38.80 E-value=29 Score=31.97 Aligned_cols=48 Identities=13% Similarity=0.024 Sum_probs=34.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCC-eEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl-~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ |.-|.+++..|+.+|. +++++.+. ..++..++.+||+.++
T Consensus 169 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~-----------~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 169 KSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPS-----------DFRRELAKKVGADYVI 217 (348)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSC-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC-----------HHHHHHHHHhCCCEEE
Confidence 34554554 7899999999999999 66555432 1257788889997543
No 286
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=38.78 E-value=2e+02 Score=25.17 Aligned_cols=55 Identities=18% Similarity=0.019 Sum_probs=35.9
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
...||| |+ +|--|.++|....+.|.+++++-+... .......++..|.++..+.-
T Consensus 32 k~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~ 86 (273)
T 3uf0_A 32 RTAVVT-GA-GSGIGRAIAHGYARAGAHVLAWGRTDG--------VKEVADEIADGGGSAEAVVA 86 (273)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSTH--------HHHHHHHHHTTTCEEEEEEC
T ss_pred CEEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEcCHHH--------HHHHHHHHHhcCCcEEEEEe
Confidence 344555 54 468999999999999999777653211 01234455667888877654
No 287
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=38.66 E-value=16 Score=31.65 Aligned_cols=63 Identities=8% Similarity=-0.061 Sum_probs=41.1
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHH---hCCCEEE
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER---LVGAHIE 181 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~---~~GAeV~ 181 (341)
.+.|.++||.+|-....=-.+.|.-|..+|++++++.+.......+ .....+..++ .+|+.|.
T Consensus 106 ~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~aL~~m~~~~~~g~~v~ 171 (204)
T 1yzv_A 106 DLPEVEQVVLWGFETHVCILQTAAALLDMKKKVVIAVDGCGSQSQG--DHCTAIQLMQSWSGDGCYIS 171 (204)
T ss_dssp SSTTEEEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHTTGGGTEEEE
T ss_pred HhCCCCEEEEEEeccCHHHHHHHHHHHHCCCEEEEECCccCCCCHH--HHHHHHHHHHHHhcCCeEEe
Confidence 3568888887765443444688999999999999998755432111 0122356677 7787754
No 288
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=38.38 E-value=44 Score=31.24 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=35.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcC-CeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~G-l~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..| .|.-|.+++..|+.+| .+++++.+. ..++..++.+||+.++
T Consensus 197 ~~VlV~G--aG~vG~~aiqlak~~Ga~~Vi~~~~~-----------~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 197 KTVVIQG--AGPLGLFGVVIARSLGAENVIVIAGS-----------PNRLKLAEEIGADLTL 245 (380)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHHTTBSEEEEEESC-----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEEC--cCHHHHHHHHHHHHcCCceEEEEcCC-----------HHHHHHHHHcCCcEEE
Confidence 4566566 3789999999999999 476666543 1357788899997544
No 289
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=38.15 E-value=1.2e+02 Score=25.91 Aligned_cols=56 Identities=7% Similarity=-0.081 Sum_probs=35.8
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|+ +|--|.++|..-.+.|.+++++....... .......++..|.++..+..
T Consensus 15 ~vlITGa-s~giG~~ia~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 70 (256)
T 3ezl_A 15 IAYVTGG-MGGIGTSICQRLHKDGFRVVAGCGPNSPR------RVKWLEDQKALGFDFYASEG 70 (256)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTEEEEEEECTTCSS------HHHHHHHHHHTTCCCEEEEC
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCCHHH------HHHHHHHHHhcCCeeEEEec
Confidence 3443454 46899999999999999987776333211 12235556677877766653
No 290
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=38.14 E-value=48 Score=26.13 Aligned_cols=27 Identities=19% Similarity=0.259 Sum_probs=19.5
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCe
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLD 148 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~ 148 (341)
..++|...|+ |+.|.++|...+..|.+
T Consensus 20 ~~~~v~iiG~--G~iG~~~a~~l~~~g~~ 46 (144)
T 3oj0_A 20 GGNKILLVGN--GMLASEIAPYFSYPQYK 46 (144)
T ss_dssp CCCEEEEECC--SHHHHHHGGGCCTTTCE
T ss_pred cCCEEEEECC--CHHHHHHHHHHHhCCCE
Confidence 3456665664 89998888877777777
No 291
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=38.01 E-value=52 Score=31.44 Aligned_cols=47 Identities=21% Similarity=0.054 Sum_probs=32.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |+.|.++|..++.+|.+++++ +... .+...++.+|++++
T Consensus 173 ~~V~ViGa--G~iG~~aa~~a~~~Ga~V~v~-D~~~----------~~~~~~~~lGa~~~ 219 (401)
T 1x13_A 173 AKVMVIGA--GVAGLAAIGAANSLGAIVRAF-DTRP----------EVKEQVQSMGAEFL 219 (401)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEE-CSCG----------GGHHHHHHTTCEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEE-cCCH----------HHHHHHHHcCCEEE
Confidence 45666675 899999999999999864443 3221 13556678899865
No 292
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=37.86 E-value=97 Score=26.45 Aligned_cols=56 Identities=13% Similarity=-0.070 Sum_probs=36.5
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|++ +--|.++|..-.+.|.+++++....... .......++..|.++..+.-
T Consensus 9 ~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 64 (255)
T 3icc_A 9 VALVTGAS-RGIGRAIAKRLANDGALVAIHYGNRKEE------AEETVYEIQSNGGSAFSIGA 64 (255)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCSHH------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCC-ChHHHHHHHHHHHCCCeEEEEeCCchHH------HHHHHHHHHhcCCceEEEec
Confidence 34434554 6789999999999999888765543321 11234556677888877654
No 293
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=37.82 E-value=49 Score=30.43 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=33.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCC-eEEEEEcCCCCCcCCCCCcchhHHHHHh-CCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl-~~~ivvp~~~~~~~~~~~~~gn~~~~~~-~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++..|. +++++.+.. .++..++. +|++.+.
T Consensus 162 ~~vlI~Ga-sggiG~~~~~~a~~~Ga~~Vi~~~~~~-----------~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 162 KTMVVSGA-AGACGSVAGQIGHFLGCSRVVGICGTH-----------EKCILLTSELGFDAAI 212 (357)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCSEEEEEESCH-----------HHHHHHHHTSCCSEEE
T ss_pred cEEEEECC-CcHHHHHHHHHHHHCCCCeEEEEeCCH-----------HHHHHHHHHcCCceEE
Confidence 45555554 47999999999999999 766654421 24566665 8987543
No 294
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.81 E-value=1.9e+02 Score=24.73 Aligned_cols=53 Identities=9% Similarity=-0.051 Sum_probs=32.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
.||| |+ +|.-|.++|....+.|.+++++-+.... .......++..|.++..+.
T Consensus 17 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~ 69 (260)
T 2zat_A 17 ALVT-AS-TDGIGLAIARRLAQDGAHVVVSSRKQEN-------VDRTVATLQGEGLSVTGTV 69 (260)
T ss_dssp EEES-SC-SSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEE
Confidence 3444 54 4789999999999999988777653211 0111233445676666554
No 295
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=37.60 E-value=2.1e+02 Score=25.02 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=23.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..+|| |+ +|.-|.++|....+.|.+++++.+
T Consensus 28 ~vlIT-Ga-sggiG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 28 VAFIT-GG-GTGLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478999999999989988776654
No 296
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=37.43 E-value=53 Score=28.06 Aligned_cols=64 Identities=17% Similarity=0.146 Sum_probs=42.2
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccch
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVS 315 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~ 315 (341)
..++||+.+|.-+.+.|+..++- ...||||.+......+.....++.+- -+++.+ -.|.|.++.
T Consensus 62 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~daLlS~vqm-p~GvpV-atV~I~~~~ 125 (174)
T 3lp6_A 62 GLEVIIAGAGGAAHLPGMVAAAT----PLPVIGVPVPLGRLDGLDSLLSIVQM-PAGVPV-ATVSIGGAG 125 (174)
T ss_dssp TCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCSSGGGHHHHHHHHCC-CTTCCC-EECCTTCHH
T ss_pred CCCEEEEecCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHHhhC-CCCCee-EEEEcCcch
Confidence 36789999999999999998874 46899999876544444555555543 234432 344454443
No 297
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=37.42 E-value=31 Score=31.63 Aligned_cols=48 Identities=19% Similarity=0.151 Sum_probs=34.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ +|.-|.+++..++.+|.+++++.+. ..++..++.+|++.+
T Consensus 168 ~~vlV~Ga-sg~iG~~~~~~a~~~G~~Vi~~~~~-----------~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 168 DDVLVMAA-GSGVSVAAIQIAKLFGARVIATAGS-----------EDKLRRAKALGADET 215 (343)
T ss_dssp CEEEECST-TSTTHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHHTCSEE
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHhcCCCEE
Confidence 45555554 4789999999999999976665442 125667778898754
No 298
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=37.41 E-value=69 Score=29.14 Aligned_cols=50 Identities=18% Similarity=0.186 Sum_probs=30.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHH-cCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~-~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
++|+..|+ |.-|...+..++. .|.+++++-+. ..++.+.+.+||+.++-.
T Consensus 165 ~~VlV~Ga--G~~g~~a~~~a~~~~g~~Vi~~~~~-----------~~r~~~~~~~Ga~~~i~~ 215 (348)
T 4eez_A 165 DWQVIFGA--GGLGNLAIQYAKNVFGAKVIAVDIN-----------QDKLNLAKKIGADVTINS 215 (348)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTSCCEEEEEESC-----------HHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcC--CCccHHHHHHHHHhCCCEEEEEECc-----------HHHhhhhhhcCCeEEEeC
Confidence 55655564 4555555556655 46666655432 236888999999866543
No 299
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=37.38 E-value=2e+02 Score=24.69 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=21.4
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |++ |--|.++|..-.+.|.+++++-+
T Consensus 13 k~vlVT-Gas-~gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVT-GAS-DGIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCC-ChHHHHHHHHHHHCCCEEEEEeC
Confidence 344555 543 67888888888888887666543
No 300
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=37.37 E-value=2.3e+02 Score=25.39 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=26.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
+.+|| | .+|.-|.+++......|.+++++.+..
T Consensus 12 ~IlVt-G-atG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 12 RVLIA-G-ATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp CEEEE-C-TTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred eEEEE-C-CCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34454 5 458999999999999999999998865
No 301
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=37.30 E-value=41 Score=31.20 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=33.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..| + |.-|..++..|+.+|.+-++.+.... .++..++.+||+.++
T Consensus 192 ~~VlV~G-a-G~vG~~avqla~~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 192 SVCAVFG-L-GGVGLAVIMGCKVAGASRIIGVDINK----------DKFARAKEFGATECI 240 (373)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEECSCG----------GGHHHHHHHTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHcCCceEe
Confidence 4555566 3 78999999999999995444443221 257788889996543
No 302
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=36.87 E-value=1.2e+02 Score=25.77 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=35.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|+ +|.-|.++|..-...|.+++++.+..... .......++..|.++..+..
T Consensus 9 ~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~ 64 (258)
T 3afn_B 9 RVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPAN------IDETIASMRADGGDAAFFAA 64 (258)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTT------HHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhh------HHHHHHHHHhcCCceEEEEC
Confidence 3443454 47899999999999999988776642211 01123344556778776653
No 303
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=36.83 E-value=50 Score=30.62 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=35.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
++|+..| + |.-|.+++..|+.+|.+.++.+... ..++.+++.+||+.++-
T Consensus 192 ~~VlV~G-a-G~vG~~a~qlak~~Ga~~Vi~~~~~----------~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 192 SSFVTWG-A-GAVGLSALLAAKVCGASIIIAVDIV----------ESRLELAKQLGATHVIN 241 (371)
T ss_dssp CEEEEES-C-SHHHHHHHHHHHHHTCSEEEEEESC----------HHHHHHHHHHTCSEEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEECCC----------HHHHHHHHHcCCCEEec
Confidence 5566566 3 7899999999999999644444322 23578888999976543
No 304
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=36.68 E-value=37 Score=30.78 Aligned_cols=49 Identities=14% Similarity=-0.041 Sum_probs=33.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++..|.+++++.+. ..++..++.+|++.+.
T Consensus 142 ~~vlV~Ga-~ggiG~~~~~~a~~~G~~V~~~~~~-----------~~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 142 EQFLFHAA-AGGVGLIACQWAKALGAKLIGTVGT-----------AQKAQSALKAGAWQVI 190 (327)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHHTCEEEEEESS-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHHcCCCEEE
Confidence 45555553 4789999999999999976665432 1245666778886543
No 305
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=36.52 E-value=1.6e+02 Score=27.90 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=47.5
Q ss_pred HHHhCC-CEEEEECC-ccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 172 VERLVG-AHIELISK-EEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 172 ~~~~~G-AeV~~v~~-~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.++.+| -++.++.+ ..+... ...+++.+.+++.+-....++..-.||.- ....++.+++.+ ..+|
T Consensus 37 ~l~~~g~~r~liVtd~~~~~~~---g~~~~v~~~L~~~g~~~~~f~~v~~~p~~-----~~v~~~~~~~~~----~~~D- 103 (407)
T 1vlj_A 37 EIKNAGIRKVLFLYGGGSIKKN---GVYDQVVDSLKKHGIEWVEVSGVKPNPVL-----SKVHEAVEVAKK----EKVE- 103 (407)
T ss_dssp HHHHTTCCEEEEEECSSHHHHS---SHHHHHHHHHHHTTCEEEEECCCCSSCBH-----HHHHHHHHHHHH----TTCS-
T ss_pred HHHHcCCCeEEEEECchHHhhc---cHHHHHHHHHHHcCCeEEEecCccCCCCH-----HHHHHHHHHHHh----cCCC-
Confidence 345566 45555532 222111 12345555665544222333333345432 223455555543 2466
Q ss_pred EEEcCCchhH--HHHHHHHHhc--------------CCCCCeEEEEeeCC
Q 019410 250 IVVACGSGGT--IAGLSLGSWL--------------GTLKAKVHAFSVCD 283 (341)
Q Consensus 250 Ivv~vGtGGt--~aGl~~~~k~--------------~~~~~rVigVe~~g 283 (341)
+|+++|+|.. +++.+..... ..+.++++.|..-.
T Consensus 104 ~IIavGGGsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 104 AVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp EEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred EEEEeCChhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 5667888765 3444333311 02567899988653
No 306
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=36.46 E-value=1.8e+02 Score=25.19 Aligned_cols=31 Identities=23% Similarity=0.052 Sum_probs=22.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..+|| |+ +|--|.++|....+.|.+++++.+
T Consensus 33 ~vlIT-Ga-sggIG~~la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 33 IVLIT-GA-GHGIGRLTAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEEc
Confidence 34454 54 478999999999999988777654
No 307
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=36.24 E-value=42 Score=29.30 Aligned_cols=10 Identities=20% Similarity=0.205 Sum_probs=8.2
Q ss_pred CCeEEEEeeC
Q 019410 273 KAKVHAFSVC 282 (341)
Q Consensus 273 ~~rVigVe~~ 282 (341)
.++|..|.+.
T Consensus 179 gIrvn~v~PG 188 (257)
T 3imf_A 179 GIRVNAIAPG 188 (257)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 6899988875
No 308
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=35.70 E-value=33 Score=31.31 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=34.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ +|.-|.+++..++.+|.+++++.+.. .++..++.+|++.+.
T Consensus 147 ~~vlV~Ga-~ggiG~~~~~~a~~~G~~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 147 DYVLIHAA-AGGMGHIMVPWARHLGATVIGTVSTE-----------EKAETARKLGCHHTI 195 (333)
T ss_dssp CEEEETTT-TSTTHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEE
Confidence 45555554 47899999999999999766654421 246667778987543
No 309
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=35.62 E-value=1.6e+02 Score=25.64 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=22.8
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
...||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 12 k~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 12 RTYLVT-GG-GSGIGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 334555 54 468899999888888988776654
No 310
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=35.29 E-value=2e+02 Score=24.98 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=22.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|.-|+++|....+.|.+++++-+
T Consensus 23 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 23 TALVT-GG-SKGIGYAIVEELAGLGARVYTCSR 53 (273)
T ss_dssp EEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-cchHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478899999998888988766654
No 311
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=35.28 E-value=2.2e+02 Score=24.59 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=33.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|+ +|.-|.++|......|.+++++.+..... ......++.+|.++..+.-
T Consensus 36 ~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~ 90 (279)
T 3ctm_A 36 VASVTGS-SGGIGWAVAEAYAQAGADVAIWYNSHPAD-------EKAEHLQKTYGVHSKAYKC 90 (279)
T ss_dssp EEEETTT-TSSHHHHHHHHHHHHTCEEEEEESSSCCH-------HHHHHHHHHHCSCEEEEEC
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcceEEEe
Confidence 3443454 47899999999999999988776543210 1112334445777766643
No 312
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=35.18 E-value=70 Score=29.62 Aligned_cols=57 Identities=12% Similarity=0.094 Sum_probs=38.2
Q ss_pred eEEEeCC-CcchHHHHHHHHHHHc-CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGG-IQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~-s~GNhg~AlA~aa~~~-Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+|+-.|- ..+|.+++++.+++++ |++++++-|..-.. + ..-+..++..|+++..+.+
T Consensus 153 kva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~----~--~~~~~~~~~~g~~~~~~~d 211 (306)
T 4ekn_B 153 KIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRL----P--KDIIEDLKAKNIKFYEKES 211 (306)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCC----C--HHHHHHHHHTTCCEEEESC
T ss_pred EEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCccccc----C--HHHHHHHHHcCCEEEEEcC
Confidence 4444453 2479999999999999 99999998864310 0 1123455667888766653
No 313
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=35.02 E-value=2.2e+02 Score=24.65 Aligned_cols=11 Identities=9% Similarity=0.057 Sum_probs=8.2
Q ss_pred CCCeEEEEeeC
Q 019410 272 LKAKVHAFSVC 282 (341)
Q Consensus 272 ~~~rVigVe~~ 282 (341)
..++|..|.+.
T Consensus 192 ~gi~v~~v~Pg 202 (273)
T 1ae1_A 192 DNIRVNSVAPG 202 (273)
T ss_dssp GTEEEEEEEEC
T ss_pred cCcEEEEEEeC
Confidence 36888888865
No 314
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=34.85 E-value=2.4e+02 Score=24.99 Aligned_cols=147 Identities=13% Similarity=0.087 Sum_probs=75.8
Q ss_pred HHHHHH-cCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCC-------CC--c--chhHHHHHhCCC-E
Q 019410 113 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD-------PG--L--IGNLLVERLVGA-H 179 (341)
Q Consensus 113 l~~A~~-~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~-------~~--~--~gn~~~~~~~GA-e 179 (341)
+.+... .+.+.|| |...+....+++-.+...+++++.+........... +. . ..-.+.+..+|. +
T Consensus 64 ~~~li~~~~v~~ii--G~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 141 (368)
T 4eyg_A 64 AQELIVNDKVNVIA--GFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKNGIKK 141 (368)
T ss_dssp HHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCcEEEE--CCCccHHHHHHHHHHHhCCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHcCCCE
Confidence 344444 6788777 344567788888999999999876532211000000 00 0 111334445675 4
Q ss_pred EEEEC-CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCC
Q 019410 180 IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 255 (341)
Q Consensus 180 V~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vG 255 (341)
|.++. ...|. ....+.+.+.+++.|-.. ..++.+..+ +.....+|.+ ..+|.||+.+
T Consensus 142 ia~i~~~~~~g----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~~~l~~--------~~~d~v~~~~- 202 (368)
T 4eyg_A 142 VATLTSDYAPG----NDALAFFKERFTAGGGEIVEEIKVPLANPD------FAPFLQRMKD--------AKPDAMFVFV- 202 (368)
T ss_dssp EEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECSSSCC------CHHHHHHHHH--------HCCSEEEEEC-
T ss_pred EEEEecCchHh----HHHHHHHHHHHHHcCCEEEEEEeCCCCCCc------HHHHHHHHHh--------cCCCEEEEec-
Confidence 54443 22221 122344455555544221 122332222 1122333332 2589988844
Q ss_pred chhHHHHHHHHHhcCCCC---CeEEEEe
Q 019410 256 SGGTIAGLSLGSWLGTLK---AKVHAFS 280 (341)
Q Consensus 256 tGGt~aGl~~~~k~~~~~---~rVigVe 280 (341)
.+..+.++...++..+.. +.+++..
T Consensus 203 ~~~~a~~~~~~~~~~g~~~~~v~~~~~~ 230 (368)
T 4eyg_A 203 PAGQGGNFMKQFAERGLDKSGIKVIGPG 230 (368)
T ss_dssp CTTCHHHHHHHHHHTTGGGTTCEEEEET
T ss_pred cchHHHHHHHHHHHcCCCcCCceEEecC
Confidence 344888999999887755 6787754
No 315
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=34.83 E-value=2.7e+02 Score=25.52 Aligned_cols=12 Identities=17% Similarity=-0.086 Sum_probs=9.3
Q ss_pred CCCCeEEEEeeC
Q 019410 271 TLKAKVHAFSVC 282 (341)
Q Consensus 271 ~~~~rVigVe~~ 282 (341)
+..++|..|.+.
T Consensus 222 ~~gIrvn~v~PG 233 (346)
T 3kvo_A 222 KGEIAVNALWPK 233 (346)
T ss_dssp TTTCEEEEEECS
T ss_pred cCCcEEEEEeCC
Confidence 467899888875
No 316
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=34.75 E-value=65 Score=28.23 Aligned_cols=41 Identities=15% Similarity=0.202 Sum_probs=31.3
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
++.|.++||.+|-....=-.+.|.-|..+|++++|+-+...
T Consensus 135 ~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~a 175 (233)
T 3irv_A 135 RARDVDTIIVCGTVTNVCCETTIRDGVHREYKVIALSDANA 175 (233)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEechhhc
Confidence 45789999987654444446889999999999999977544
No 317
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=34.62 E-value=2.3e+02 Score=24.61 Aligned_cols=33 Identities=15% Similarity=-0.029 Sum_probs=24.6
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
...||| |+ +|--|.++|..-.+.|.+++++-+.
T Consensus 12 k~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 12 KVAIIT-GA-CGGIGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 344555 54 4689999999999999998777554
No 318
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=34.60 E-value=1.4e+02 Score=25.70 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=43.2
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. +. .+++++++.+.+.+..+++.+-.++... ..+..++.+. + .+|.
T Consensus 24 a~~l~~~G~~V~~~~r~~-~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v---~~~~~~~~~~-g------~id~ 86 (252)
T 3h7a_A 24 AKKFAAEGFTVFAGRRNG-EK------LAPLVAEIEAAGGRIVARSLDARNEDEV---TAFLNAADAH-A------PLEV 86 (252)
T ss_dssp HHHHHHTTCEEEEEESSG-GG------GHHHHHHHHHTTCEEEEEECCTTCHHHH---HHHHHHHHHH-S------CEEE
T ss_pred HHHHHHCCCEEEEEeCCH-HH------HHHHHHHHHhcCCeEEEEECcCCCHHHH---HHHHHHHHhh-C------CceE
Confidence 344555799999998642 11 2344556665554556666655555543 3345555554 3 5999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
+|..+|.+
T Consensus 87 lv~nAg~~ 94 (252)
T 3h7a_A 87 TIFNVGAN 94 (252)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99999853
No 319
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.53 E-value=2.3e+02 Score=24.63 Aligned_cols=52 Identities=13% Similarity=0.007 Sum_probs=33.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
..||| |++ |--|.++|..-.+.|.+++++-+... .-....+.+|.++..+.-
T Consensus 29 ~vlVT-Gas-~gIG~aia~~la~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~ 80 (266)
T 3grp_A 29 KALVT-GAT-GGIGEAIARCFHAQGAIVGLHGTRED----------KLKEIAADLGKDVFVFSA 80 (266)
T ss_dssp EEEES-STT-SHHHHHHHHHHHHTTCEEEEEESCHH----------HHHHHHHHHCSSEEEEEC
T ss_pred EEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeCCHH----------HHHHHHHHhCCceEEEEe
Confidence 34454 544 67899999999999998777654321 112334456777766653
No 320
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=34.48 E-value=2.5e+02 Score=24.96 Aligned_cols=54 Identities=13% Similarity=0.131 Sum_probs=33.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCC-CEEEEEC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVG-AHIELIS 184 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~G-AeV~~v~ 184 (341)
+++..|| +|--|.++|..-.+.|.+++++-+.... .......++..| .++..+.
T Consensus 43 ~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~ 97 (293)
T 3rih_A 43 SVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRE-------LSSVTAELGELGAGNVIGVR 97 (293)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGG-------GHHHHHHHTTSSSSCEEEEE
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhhCCCcEEEEE
Confidence 3443454 4688999999999999988877654321 012244455555 5666554
No 321
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=34.43 E-value=2.3e+02 Score=24.53 Aligned_cols=202 Identities=13% Similarity=-0.011 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCc--CCCC----C--cchh--H-HHHHhC
Q 019410 108 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV--DQDP----G--LIGN--L-LVERLV 176 (341)
Q Consensus 108 kl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~--~~~~----~--~~gn--~-~~~~~~ 176 (341)
+....++.+..++.+.||..+ ...+........++..|++++.+-....... ...+ . ..+. . .+++..
T Consensus 49 ~~~~~i~~l~~~~vdgiii~~-~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g 127 (297)
T 3rot_A 49 KQVQFIESALATYPSGIATTI-PSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELT 127 (297)
T ss_dssp HHHHHHHHHHHTCCSEEEECC-CCSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhc
Confidence 344567777788889888653 2233334445566677999887743221100 0000 0 0011 1 222223
Q ss_pred --CCEEEEECCc-cccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEc
Q 019410 177 --GAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 253 (341)
Q Consensus 177 --GAeV~~v~~~-~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~ 253 (341)
.-+|.++... ... ....+.+-..+.+++.+-....+. ...+ ...++ ....+++++- .++|+||+
T Consensus 128 ~~~~~i~~i~g~~~~~--~~~~R~~Gf~~~l~~~g~~~~~~~-~~~~--~~~~~-~~~~~~l~~~------~~~~ai~~- 194 (297)
T 3rot_A 128 PSAKRALVLNPQPGHI--GLEKRAYGIKTILQDKGIFFEELD-VGTD--PNQVQ-SRVKSYFKIH------PETNIIFC- 194 (297)
T ss_dssp TTCCEEEEEESCTTCH--HHHHHHHHHHHHHHHTTCEEEEEE-CCSC--HHHHH-HHHHHHHHHC------TTCCEEEE-
T ss_pred CCCceEEEEeCCCCcH--HHHHHHHHHHHHHHhcCCeEEEee-cCCC--hHHHH-HHHHHHHHhC------CCCCEEEE-
Confidence 2456555322 111 111223334444555431112222 1112 12233 3344555442 36899987
Q ss_pred CCchhHHHHHHHHHhcCC-----CCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccchHHHHHHHHHHHHH
Q 019410 254 CGSGGTIAGLSLGSWLGT-----LKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNIL 328 (341)
Q Consensus 254 vGtGGt~aGl~~~~k~~~-----~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~~~~~~~~~~~~~~ 328 (341)
.+...+.|+..+++..+ .++.|+|++-.. .....+..+.. ...|...-.+.-...-.++.+++
T Consensus 195 -~~d~~A~g~~~al~~~g~~vP~~dv~vig~D~~~------~~~~~i~~~~~-----lttv~~~~~~~g~~av~~l~~~i 262 (297)
T 3rot_A 195 -LTSQALDPLGQMLLHPDRYDFNYQPQVYSFDKTP------NTVSLIHKKLV-----NYVMDQQPFLMGYLSITQLVLMN 262 (297)
T ss_dssp -SSHHHHHHHHHHHHSHHHHTCCCCCEEEEECCCH------HHHHHHHTTSC-----CEEECCCHHHHHHHHHHHHHHHH
T ss_pred -cCCcchHHHHHHHHhcCCccCCCceEEEEeCCCH------HHHHHHHcCCc-----eEEEecChHHHHHHHHHHHHHHH
Confidence 45678889999998865 378899875421 11112222211 12333333344444555666777
Q ss_pred hcCCCCC
Q 019410 329 MNGKQPT 335 (341)
Q Consensus 329 ~~~~~~~ 335 (341)
.+++.|.
T Consensus 263 ~g~~~~~ 269 (297)
T 3rot_A 263 RYQLNPV 269 (297)
T ss_dssp HHCCCCC
T ss_pred hCCCCCc
Confidence 7776653
No 322
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=34.42 E-value=1.3e+02 Score=26.83 Aligned_cols=32 Identities=19% Similarity=0.110 Sum_probs=20.0
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCC---eEEEEE
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNL---DCYLIL 153 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl---~~~ivv 153 (341)
|...||| |++ |.-|+++|....+.|. +++++-
T Consensus 33 ~k~~lVT-Gas-~GIG~aia~~l~~~G~~~~~V~~~~ 67 (287)
T 3rku_A 33 KKTVLIT-GAS-AGIGKATALEYLEASNGDMKLILAA 67 (287)
T ss_dssp TCEEEEE-STT-SHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCEEEEe-cCC-ChHHHHHHHHHHHcCCCCceEEEEE
Confidence 4445565 543 6778888877776676 555443
No 323
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=34.39 E-value=44 Score=31.04 Aligned_cols=49 Identities=18% Similarity=0.183 Sum_probs=33.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHH-cCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~-~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
++|+..|+ .|.-|.+++..|+. .|.+++++.+. ..++..++.+||+.++
T Consensus 173 ~~VlV~Ga-~G~vG~~a~qlak~~~g~~Vi~~~~~-----------~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 173 PAILIVGG-AGGVGSIAVQIARQRTDLTVIATASR-----------PETQEWVKSLGAHHVI 222 (363)
T ss_dssp EEEEEEST-TSHHHHHHHHHHHHHCCSEEEEECSS-----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHhcCCEEEEEeCC-----------HHHHHHHHHcCCCEEE
Confidence 34555553 37899999999997 58876655432 2357888899997654
No 324
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=34.19 E-value=2.3e+02 Score=24.48 Aligned_cols=202 Identities=11% Similarity=0.045 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-----cCCCCCcchh--HHHHHhC--CC
Q 019410 108 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--LLVERLV--GA 178 (341)
Q Consensus 108 kl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-----~~~~~~~~gn--~~~~~~~--GA 178 (341)
.....+..+..++.+.||..+. ..+........+...|++++++-...... ...+....+. .+.+... |.
T Consensus 49 ~~~~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~g~ 127 (305)
T 3g1w_A 49 EQITVLEQAIAKNPAGIAISAI-DPVELTDTINKAVDAGIPIVLFDSGAPDSHAHSFLGTNNYNAGMNAAYKMAELLDGE 127 (305)
T ss_dssp HHHHHHHHHHHHCCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhCCCEEEEcCC-CHHHHHHHHHHHHHCCCcEEEECCCCCCCceeEEECcCHHHHHHHHHHHHHHHhCCC
Confidence 3445566677788999887543 22322334455667899987775432110 0000000011 1122222 54
Q ss_pred -EEEEECCccccccCcHHHHHHHHHHHHHhCCCcE--EeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCC
Q 019410 179 -HIELISKEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 255 (341)
Q Consensus 179 -eV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~--~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vG 255 (341)
+|.++...... ....+.+.+.+.+++.+...- .+..+..+.. .++ ....+++++- .++|+||+ .
T Consensus 128 ~~i~~i~~~~~~--~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~------~~~~ai~~--~ 194 (305)
T 3g1w_A 128 GEVAVITLPNQL--NHQERTTGFKETLEAEFPAIEVIAVEDGRGDSL--HSR-RVAHQLLEDY------PNLAGIFA--T 194 (305)
T ss_dssp EEEEEEECTTCH--HHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHH--HHH-HHHHHHHHHC------TTEEEEEE--S
T ss_pred cEEEEEeCCCcc--cHHHHHHHHHHHHHhhCCCCEEEEEecCCCCHH--HHH-HHHHHHHHhC------CCceEEEE--C
Confidence 35555432111 112233334444554443321 1212222221 233 3344554432 35888886 5
Q ss_pred chhHHHHHHHHHhcCCC--CCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEEeccchHHHHHHHHHHHHHhcCCC
Q 019410 256 SGGTIAGLSLGSWLGTL--KAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMNGKQ 333 (341)
Q Consensus 256 tGGt~aGl~~~~k~~~~--~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~v~d~~~~~~~~~~~~~~~~~~~~ 333 (341)
+...+.|+..+++..+. ++.|+|++-.. ..+..+..+. +. ..|...-.+.....-.++.+++.+.+.
T Consensus 195 ~d~~a~g~~~al~~~g~~~di~vig~d~~~------~~~~~~~~~~---l~--ttv~~~~~~~g~~av~~l~~~i~g~~~ 263 (305)
T 3g1w_A 195 EANGGVGVGDAVRLESRAGEIQIISFDTDK------GTLDLVDEGI---IS--ATLAQGTWNMGYWSLTYLFHLHHGLTE 263 (305)
T ss_dssp SHHHHHHHHHHHHHTTCTTTSEEEEESCCH------HHHHHHHTTS---SC--EEEEECHHHHHHHHHHHHHHHHTTCSC
T ss_pred CCcchhhHHHHHHhcCCCCCeEEEEeCCCH------HHHHHHHcCc---eE--EEEecChHHHHHHHHHHHHHHhcCCcC
Confidence 56678899999998775 68888865321 1122232222 11 344444445555555666667766655
Q ss_pred C
Q 019410 334 P 334 (341)
Q Consensus 334 ~ 334 (341)
|
T Consensus 264 ~ 264 (305)
T 3g1w_A 264 P 264 (305)
T ss_dssp C
T ss_pred c
Confidence 4
No 325
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=34.08 E-value=62 Score=30.62 Aligned_cols=77 Identities=16% Similarity=0.042 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHH--HHHHHHHhcC----
Q 019410 197 TNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI--AGLSLGSWLG---- 270 (341)
Q Consensus 197 ~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~--aGl~~~~k~~---- 270 (341)
.+++.+.|++.+-....++....||.- ....++.+++.+ ..+| +|+++|+|..+ ++.+......
T Consensus 48 ~~~v~~~L~~~gi~~~~~~~v~~~p~~-----~~v~~~~~~~~~----~~~D-~IIavGGGsv~D~aK~ia~~~~~~~~~ 117 (383)
T 3ox4_A 48 VKQVADLLKAQGINSAVYDGVMPNPTV-----TAVLEGLKILKD----NNSD-FVISLGGGSPHDCAKAIALVATNGGEV 117 (383)
T ss_dssp HHHHHHHHHTTTCEEEEEEEECSSCBH-----HHHHHHHHHHHH----HTCS-EEEEEESHHHHHHHHHHHHHHHSCSSG
T ss_pred HHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCcC-EEEEeCCcHHHHHHHHHHHHHhCCCCH
Confidence 355566666544222233322234432 123344444432 2466 56889998763 4444433311
Q ss_pred ----------CCCCeEEEEeeCC
Q 019410 271 ----------TLKAKVHAFSVCD 283 (341)
Q Consensus 271 ----------~~~~rVigVe~~g 283 (341)
.+..+++.|..-.
T Consensus 118 ~d~~~~~~~~~~~~p~i~IPTTa 140 (383)
T 3ox4_A 118 KDYEGIDKSKKPALPLMSINTTA 140 (383)
T ss_dssp GGGCEESCCSSCCSCEEEEECSS
T ss_pred HHHhcccccccCCCCEEEEeCCC
Confidence 2467889888653
No 326
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=34.00 E-value=98 Score=27.62 Aligned_cols=68 Identities=7% Similarity=-0.065 Sum_probs=36.8
Q ss_pred CcEEeCCCCCchh-HHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCC
Q 019410 210 RPYVIPVGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 284 (341)
Q Consensus 210 ~~~~ip~g~~n~~-~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~ 284 (341)
..+++|....+.. ........+.+.++++- +.+ -++++++|.|+..++..+......-.+.-|+..|.
T Consensus 28 ~v~Vvp~~~~~~~~~~~~lg~~aA~~L~~~l------~~~-~vIGv~wG~Tl~~v~~~l~~~~~~~~~~~V~l~Gg 96 (266)
T 3efb_A 28 DVVVVSGNDEDEETQLAMMGLHGAQLLDRLL------EPG-DIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGG 96 (266)
T ss_dssp EEEEECCCSCCHHHHHHHHHHHHHHHHHHHC------CTT-CEEEECCSHHHHHHHHTCCCCSSCCCCEEEESBCB
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHHHHHhC------CCC-CEEEEcccHHHHHHHHhcCccCCCCCeEEEEcCCC
Confidence 4678886433322 22222233445444442 223 36788999999999887754322123455666665
No 327
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=33.93 E-value=2.4e+02 Score=24.61 Aligned_cols=54 Identities=17% Similarity=-0.001 Sum_probs=33.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
.||| |+ +|.-|.++|....+.|.+++++.+.... ...-...++..|.++..+..
T Consensus 47 vlIT-Ga-sggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~ 100 (285)
T 2c07_A 47 ALVT-GA-GRGIGREIAKMLAKSVSHVICISRTQKS-------CDSVVDEIKSFGYESSGYAG 100 (285)
T ss_dssp EEEE-ST-TSHHHHHHHHHHTTTSSEEEEEESSHHH-------HHHHHHHHHTTTCCEEEEEC
T ss_pred EEEE-CC-CcHHHHHHHHHHHHcCCEEEEEcCCHHH-------HHHHHHHHHhcCCceeEEEC
Confidence 3455 54 4789999999999999988775432110 01112344556777766653
No 328
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=33.82 E-value=2.2e+02 Score=24.25 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=26.7
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEeeC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 282 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~~ 282 (341)
..+|+||+. +...+.|+..++++.+. ++.|+|++-.
T Consensus 199 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 238 (296)
T 3brq_A 199 AKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFDDI 238 (296)
T ss_dssp -CCSEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESCC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEeecCc
Confidence 368999974 56778899999987653 5678887643
No 329
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=33.78 E-value=93 Score=27.32 Aligned_cols=12 Identities=8% Similarity=-0.111 Sum_probs=8.6
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 185 ~gi~vn~v~PG~ 196 (281)
T 3svt_A 185 SWVRVNSIRPGL 196 (281)
T ss_dssp GTEEEEEEEECS
T ss_pred cCeEEEEEEeCc
Confidence 358888888754
No 330
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=33.67 E-value=1.2e+02 Score=26.43 Aligned_cols=56 Identities=20% Similarity=0.140 Sum_probs=36.9
Q ss_pred cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEe
Q 019410 211 PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFS 280 (341)
Q Consensus 211 ~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe 280 (341)
.||-..|-.|... ...++.|=++.+ .+++||+++-+|-|+.=+...+ .+++||.|.
T Consensus 18 ~YF~~~G~eNT~~---tl~la~era~e~-------~Ik~iVVAS~sG~TA~k~~e~~----~~i~lVvVT 73 (201)
T 1vp8_A 18 VYFNKPGRENTEE---TLRLAVERAKEL-------GIKHLVVASSYGDTAMKALEMA----EGLEVVVVT 73 (201)
T ss_dssp EEESSCSGGGHHH---HHHHHHHHHHHH-------TCCEEEEECSSSHHHHHHHHHC----TTCEEEEEE
T ss_pred EEecCCCcccHHH---HHHHHHHHHHHc-------CCCEEEEEeCCChHHHHHHHHh----cCCeEEEEe
Confidence 3554445444443 445666666655 3889999999999986555443 457888887
No 331
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=33.34 E-value=94 Score=24.74 Aligned_cols=29 Identities=14% Similarity=0.290 Sum_probs=18.9
Q ss_pred CCCCceEEeccc-hHHHHHHHHHHHHHhcC
Q 019410 303 VDSRDIVNIQNV-SVYMTFKNILMNILMNG 331 (341)
Q Consensus 303 ~~~~~iv~v~d~-~~~~~~~~~~~~~~~~~ 331 (341)
+...+|+.|+|. ..=.|+..++..|..+|
T Consensus 81 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~g 110 (153)
T 1vdm_A 81 LKDKRVVIVDDVSDTGKTLEVVIEEVKKLG 110 (153)
T ss_dssp CBTCEEEEEEEEESSCHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEecccCChHHHHHHHHHHHHcC
Confidence 344578888887 44566666666666555
No 332
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=33.31 E-value=86 Score=27.94 Aligned_cols=55 Identities=16% Similarity=0.125 Sum_probs=38.4
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
|...||| ||+ +.-|+++|..-++.|.++++.-++.. ......++..|.++..+.-
T Consensus 9 GKvalVT-Gas-~GIG~aiA~~la~~Ga~Vvi~~r~~~---------~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 9 GRKALVT-GAN-TGLGQAIAVGLAAAGAEVVCAARRAP---------DETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TCEEEET-TTT-SHHHHHHHHHHHHTTCEEEEEESSCC---------HHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEe-CcC-CHHHHHHHHHHHHcCCEEEEEeCCcH---------HHHHHHHHHhCCcEEEEEc
Confidence 4445665 544 68999999999999999877754321 2246778888888766643
No 333
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=33.09 E-value=2.3e+02 Score=24.21 Aligned_cols=72 Identities=13% Similarity=-0.021 Sum_probs=41.8
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+.+.. +..+++.+++.+.+....++..+-.++... ..+..++.+..+ .+|.
T Consensus 31 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~---~~~~~~~~~~~g------~iD~ 94 (260)
T 2zat_A 31 ARRLAQDGAHVVVSSRKQ-------ENVDRTVATLQGEGLSVTGTVCHVGKAEDR---ERLVAMAVNLHG------GVDI 94 (260)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHH---HHHHHHHHHHHS------CCCE
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHHHhcCCceEEEEccCCCHHHH---HHHHHHHHHHcC------CCCE
Confidence 344455799999987642 112334455555444445555444444432 344556666553 6999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
||..+|..
T Consensus 95 lv~~Ag~~ 102 (260)
T 2zat_A 95 LVSNAAVN 102 (260)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999853
No 334
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=33.00 E-value=1.8e+02 Score=25.92 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=43.6
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhC-CCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEG-RRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD 248 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g-~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D 248 (341)
.+.+...|++|+.+++.. +. .+++.+++.+.+ ....++..+-.++.. ...+..++.++++ .+|
T Consensus 58 a~~la~~G~~V~~~~r~~-~~------~~~~~~~l~~~~~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~g------~iD 121 (293)
T 3rih_A 58 ATVFARAGANVAVAARSP-RE------LSSVTAELGELGAGNVIGVRLDVSDPGS---CADAARTVVDAFG------ALD 121 (293)
T ss_dssp HHHHHHTTCEEEEEESSG-GG------GHHHHHHHTTSSSSCEEEEECCTTCHHH---HHHHHHHHHHHHS------CCC
T ss_pred HHHHHHCCCEEEEEECCH-HH------HHHHHHHHHhhCCCcEEEEEEeCCCHHH---HHHHHHHHHHHcC------CCC
Confidence 444556799999997642 11 133455554433 244556655555544 3345667777664 699
Q ss_pred EEEEcCCch
Q 019410 249 DIVVACGSG 257 (341)
Q Consensus 249 ~Ivv~vGtG 257 (341)
.+|..+|..
T Consensus 122 ~lvnnAg~~ 130 (293)
T 3rih_A 122 VVCANAGIF 130 (293)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999853
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=32.90 E-value=63 Score=29.73 Aligned_cols=48 Identities=15% Similarity=0.111 Sum_probs=31.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
++|+..|+ |.-|.+.+..|+.+|.+.++++... ..++.+++.++.+++
T Consensus 181 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~----------~~~~~~a~~l~~~~~ 228 (363)
T 3m6i_A 181 DPVLICGA--GPIGLITMLCAKAAGACPLVITDID----------EGRLKFAKEICPEVV 228 (363)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCSEEEEESC----------HHHHHHHHHHCTTCE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC----------HHHHHHHHHhchhcc
Confidence 44544554 7899999999999999855554332 125667777743444
No 336
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=32.89 E-value=1.2e+02 Score=26.49 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=33.8
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcC-CeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~G-l~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
+|+..| .+|+-|.+++......| .+++++.+.... .....+...|.+++..+
T Consensus 7 ~ilVtG-atG~iG~~l~~~L~~~g~~~V~~~~R~~~~---------~~~~~l~~~~~~~~~~D 59 (299)
T 2wm3_A 7 LVVVFG-GTGAQGGSVARTLLEDGTFKVRVVTRNPRK---------KAAKELRLQGAEVVQGD 59 (299)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHHCSSEEEEEESCTTS---------HHHHHHHHTTCEEEECC
T ss_pred EEEEEC-CCchHHHHHHHHHHhcCCceEEEEEcCCCC---------HHHHHHHHCCCEEEEec
Confidence 444445 45899999999888888 898888875321 11233344677766543
No 337
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=32.52 E-value=2.4e+02 Score=24.33 Aligned_cols=51 Identities=22% Similarity=0.029 Sum_probs=32.8
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
+++..|| +|--|.++|......|.+++++.+.... -......++.++..+.
T Consensus 7 ~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~ 57 (281)
T 3m1a_A 7 VWLVTGA-SSGFGRAIAEAAVAAGDTVIGTARRTEA----------LDDLVAAYPDRAEAIS 57 (281)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGG----------GHHHHHHCTTTEEEEE
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHH----------HHHHHHhccCCceEEE
Confidence 3443454 4789999999999999998877664321 1234445666665554
No 338
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=32.37 E-value=2.5e+02 Score=24.44 Aligned_cols=156 Identities=11% Similarity=0.062 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCC-----CcCCCCCcchh---HHHHHhC-C-CE
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----LVDQDPGLIGN---LLVERLV-G-AH 179 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~-----~~~~~~~~~gn---~~~~~~~-G-Ae 179 (341)
...+..+..++.+.||..+.. .+........++..|++++++-..... ....+....+. ..+++.+ | .+
T Consensus 47 ~~~i~~l~~~~vdgiIi~~~~-~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~a~~~L~~~~~G~~~ 125 (313)
T 2h3h_A 47 LQMLESFIAEGVNGIAIAPSD-PTAVIPTIKKALEMGIPVVTLDTDSPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKGK 125 (313)
T ss_dssp HHHHHHHHHTTCSEEEECCSS-TTTTHHHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHHTSCSE
T ss_pred HHHHHHHHHcCCCEEEEeCCC-hHHHHHHHHHHHHCCCeEEEeCCCCCCcceeEEECcCHHHHHHHHHHHHHHHcCCCCE
Confidence 345666667889999865432 222223334556789998877432111 00000000111 1122221 4 36
Q ss_pred EEEECCc-cccccCcHHHHHHHHHHHHHhCCCcEEeC--CCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 019410 180 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIP--VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGS 256 (341)
Q Consensus 180 V~~v~~~-~~~~~~~~~~~~~~a~~l~~~g~~~~~ip--~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGt 256 (341)
|.++... .... ...+.+...+.+++.+ .-+.. .+..+. ..++ ....+++++- .++|+||+. +
T Consensus 126 I~~i~~~~~~~~--~~~R~~gf~~~l~~~g--~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~~--~ 190 (313)
T 2h3h_A 126 VVIGTGSLTAMN--SLQRIQGFKDAIKDSE--IEIVDILNDEEDG--ARAV-SLAEAALNAH------PDLDAFFGV--Y 190 (313)
T ss_dssp EEEEESCSSCHH--HHHHHHHHHHHHTTSS--CEEEEEEECSSCH--HHHH-HHHHHHHHHC------TTCCEEEEC--S
T ss_pred EEEEECCCCCcc--HHHHHHHHHHHhcCCC--CEEEEeecCCCCH--HHHH-HHHHHHHHHC------cCceEEEEc--C
Confidence 6666432 1110 1122233333343322 21111 111111 1233 3344555432 358999975 3
Q ss_pred hhHHHHHHHHHhcCCC--CCeEEEEee
Q 019410 257 GGTIAGLSLGSWLGTL--KAKVHAFSV 281 (341)
Q Consensus 257 GGt~aGl~~~~k~~~~--~~rVigVe~ 281 (341)
...+.|+..+++..+. ++.|+|++-
T Consensus 191 d~~a~g~~~al~~~G~p~dv~vvg~d~ 217 (313)
T 2h3h_A 191 AYNGPAQALVVKNAGKVGKVKIVCFDT 217 (313)
T ss_dssp TTHHHHHHHHHHHTTCTTTSEEEEECC
T ss_pred CCccHHHHHHHHHcCCCCCeEEEEeCC
Confidence 4567899999998763 688888763
No 339
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=32.37 E-value=60 Score=27.73 Aligned_cols=39 Identities=13% Similarity=0.126 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 109 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 109 l~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
++..+.++.++|++.|| |+ .-+.-.|+++|++++++..+
T Consensus 131 ~~~~i~~l~~~G~~vvV--G~------~~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 131 ITTLISKVKTENIKIVV--SG------KTVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHHHHHTTCCEEE--EC------HHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHCCCeEEE--CC------HHHHHHHHHcCCcEEEEecC
Confidence 45678888999999888 32 23467889999998887653
No 340
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=32.32 E-value=2.8e+02 Score=24.98 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=22.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
..||| |+ +|--|.++|......|.+++++.
T Consensus 48 ~~lVT-Ga-s~GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 48 VALVT-GA-AKRLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp EEEET-TC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEc
Confidence 34444 54 47899999999999999877776
No 341
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=32.27 E-value=2.5e+02 Score=24.30 Aligned_cols=11 Identities=9% Similarity=-0.010 Sum_probs=7.9
Q ss_pred CCCeEEEEeeC
Q 019410 272 LKAKVHAFSVC 282 (341)
Q Consensus 272 ~~~rVigVe~~ 282 (341)
..++|..|.+.
T Consensus 204 ~gi~v~~v~Pg 214 (272)
T 1yb1_A 204 TGVKTTCLCPN 214 (272)
T ss_dssp TTEEEEEEEET
T ss_pred CCeEEEEEeCC
Confidence 46888887764
No 342
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=32.26 E-value=81 Score=28.35 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=30.8
Q ss_pred hHhHHHHHHHHHHHHc-C----CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 104 NKVRKLEFLMADAVAQ-G----ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 104 nK~Rkl~~ll~~A~~~-g----~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|-.--+++.+..+... + .++|...|. |+.|+++|..++.+|.+++++-+
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~--G~iG~~~a~~l~~~G~~V~~~dr 186 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGL--GRVGMSVARKFAALGAKVKVGAR 186 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEee--CHHHHHHHHHHHhCCCEEEEEEC
Confidence 3333355555544432 2 245655664 89999999999999987655543
No 343
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=32.26 E-value=2.4e+02 Score=24.12 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=27.9
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC-CCeEEEEee
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL-KAKVHAFSV 281 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~-~~rVigVe~ 281 (341)
.++|+||+ .+...+.|+..++++.+. ++.|+|++-
T Consensus 194 ~~~~ai~~--~~d~~a~g~~~al~~~g~~di~vig~d~ 229 (293)
T 3l6u_A 194 IPFDAVYC--HNDDIAMGVLEALKKAKISGKIVVGIDG 229 (293)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred CCCCEEEE--CCchHHHHHHHHHHhCCCCCeEEEEecC
Confidence 46899987 466778899999998876 788888763
No 344
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=32.10 E-value=2.6e+02 Score=24.60 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCC--CCeEEEEe
Q 019410 230 AIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL--KAKVHAFS 280 (341)
Q Consensus 230 ~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~--~~rVigVe 280 (341)
...+++++.. ..+|+||+ .+..++.|+..+++..+. ++.|+|++
T Consensus 186 ~~~~ll~~~~-----~~~~aI~~--~nd~~A~g~~~al~~~G~~~di~vvg~D 231 (332)
T 2rjo_A 186 IMQAWMTRFN-----SKIKGVWA--ANDDMALGAIEALRAEGLAGQIPVTGMD 231 (332)
T ss_dssp HHHHHHHHHG-----GGEEEEEE--SSHHHHHHHHHHHHHTTCBTTBCEECSB
T ss_pred HHHHHHHhcC-----CCeeEEEE--CCCchHHHHHHHHHHcCCCCCCEEEeec
Confidence 4456655411 25889886 566788999999998775 67787754
No 345
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=31.55 E-value=47 Score=28.50 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=25.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
+.+| .|| |..|..+|...+++|++++++-+.
T Consensus 5 dVvV-VGg--G~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 5 QVLI-VGA--GFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp SEEE-ECC--SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCCEEEEecC
Confidence 4444 565 799999999999999999888654
No 346
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=31.31 E-value=71 Score=26.84 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=30.5
Q ss_pred HHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 117 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
++.|.++||.+|-....=-.+.|..|..+|++++++.+...
T Consensus 109 ~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (190)
T 3lqy_A 109 DDAGIKKLVIVGAMTHMAIDAVTRAAEDLGYECAVAHDACA 149 (190)
T ss_dssp HHC-CCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEEEEEE
T ss_pred HhCCCCEEEEEecCcChHHHHHHHHHHHCCCEEEEechhhc
Confidence 45789999987654444446889999999999999987544
No 347
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=31.28 E-value=1.5e+02 Score=27.26 Aligned_cols=53 Identities=8% Similarity=-0.017 Sum_probs=29.5
Q ss_pred eEEEeCCCcchHH---HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 123 CIITIGGIQSNHC---RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 123 ~vVt~G~s~GNhg---~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
.+|.|| . ||.| ..+|...+..|+++.++++..... ......+++..+..|..+
T Consensus 135 vlVlcG-~-GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~---~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 135 VALLCG-P-HVKGAQGISCGRHLANHDVQVILFLPNFVKM---LESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEEC-S-SHHHHHHHHHHHHHHHTTCEEEEECCCCSSC---CHHHHHHHHHHHTSSCEE
T ss_pred EEEEEC-C-CCCHHHHHHHHHHHHHCCCcEEEEEecCCCC---CHHHHHHHHHHHHcCCcc
Confidence 445565 3 5554 455555666899999988753211 011123455566667654
No 348
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.24 E-value=2.6e+02 Score=24.14 Aligned_cols=12 Identities=25% Similarity=0.158 Sum_probs=8.9
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 182 ~gi~vn~v~PG~ 193 (262)
T 3pk0_A 182 HKITVNAIMPGN 193 (262)
T ss_dssp GTCEEEEEEECS
T ss_pred hCcEEEEEEeCc
Confidence 368998888754
No 349
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=31.17 E-value=2.3e+02 Score=24.26 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=23.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+ +|.-|+++|..-.+.|.+++++.+.
T Consensus 11 ~vlVT-Ga-s~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 11 TALVT-GG-SRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp EEEEE-SC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 4789999999999999987776543
No 350
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=31.12 E-value=88 Score=30.96 Aligned_cols=54 Identities=17% Similarity=0.152 Sum_probs=32.6
Q ss_pred CeEEEeCCCcchHH-HHH--HHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEE
Q 019410 122 DCIITIGGIQSNHC-RAA--AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 181 (341)
Q Consensus 122 ~~vVt~G~s~GNhg-~Al--A~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~ 181 (341)
+.+|.+|. ||.| -++ |..-+..|+++.++++... . ++....+++..+.+|.++.
T Consensus 54 ~v~VlcG~--GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~---~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 54 RFLVLCGG--GNNGGDGFVVARNLLGVVKDVLVVFLGKK-K---TPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEECS--SHHHHHHHHHHHHHTTTSSEEEEEECCSS-C---CHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECC--CCCHHHHHHHHHHHHHCCCeEEEEEECCC-C---CHHHHHHHHHHHhCCCcee
Confidence 34556653 5554 444 4445557999999988643 1 1112346777888887664
No 351
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=31.05 E-value=74 Score=27.46 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=31.0
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCC
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
++.|.++||.+|-. .|.| .+.|..|..+|++++++.+...
T Consensus 105 ~~~gi~~lvi~G~~-T~~CV~~Ta~dA~~~Gy~V~vv~Da~a 145 (211)
T 3oqp_A 105 AARQIDTLTVTGYM-THNCDASTINHAVHSGLAVEFLHDATG 145 (211)
T ss_dssp HTTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhCCCCEEEEEeec-cCHHHHHHHHHHHHCCCeEEEechhee
Confidence 45689999987644 4555 5889999999999999987544
No 352
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=30.90 E-value=2.6e+02 Score=24.09 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=27.9
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEeeC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 282 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~~ 282 (341)
.++|+||+ .+..++.|+..++++.+. ++.|+|++-.
T Consensus 194 ~~~~ai~~--~~d~~A~g~~~al~~~G~~vP~di~vvg~D~~ 233 (289)
T 2fep_A 194 KKPTAILS--ATDEMALGIIHAAQDQGLSIPEDLDIIGFDNT 233 (289)
T ss_dssp SCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCCEEEE--CCHHHHHHHHHHHHHcCCCCCCCeEEEEECCh
Confidence 46899997 466788899999998764 5788887743
No 353
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=30.85 E-value=1e+02 Score=27.19 Aligned_cols=12 Identities=8% Similarity=-0.050 Sum_probs=8.8
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 196 ~gI~vn~v~PG~ 207 (271)
T 4ibo_A 196 YGIQANAIGPGY 207 (271)
T ss_dssp GTEEEEEEEECS
T ss_pred hCeEEEEEEecc
Confidence 368888888754
No 354
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=30.84 E-value=62 Score=30.25 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=25.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
++|...|+ |..|+.+|.+|+++|++++++-+.
T Consensus 13 ~~IlIlG~--G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGG--GQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEECC
Confidence 45555665 678999999999999999888653
No 355
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=30.71 E-value=2.3e+02 Score=26.79 Aligned_cols=60 Identities=17% Similarity=0.021 Sum_probs=38.3
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcc-hhHHHHHhCCCEEEE
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLI-GNLLVERLVGAHIEL 182 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~-gn~~~~~~~GAeV~~ 182 (341)
.+.|+..|| |+.|.-+|...+++|.+++++.+........++... .-...++..|-+++.
T Consensus 147 ~~~vvViGg--G~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~ 207 (437)
T 4eqs_A 147 VDKVLVVGA--GYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRL 207 (437)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEE
T ss_pred CcEEEEECC--ccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEe
Confidence 456766776 899999999999999999999775442211111111 113445556665543
No 356
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=30.56 E-value=2.5e+02 Score=26.09 Aligned_cols=91 Identities=15% Similarity=0.136 Sum_probs=46.8
Q ss_pred CCEEEEECCccccccCcHHHHHHHHHHHHHhCCCc--EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcC
Q 019410 177 GAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 254 (341)
Q Consensus 177 GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~--~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~v 254 (341)
|-++.++.+.... ..+.+++.+.+.+. -.. +.+|.+-.|+.- ....++++++.+. +..=..+++++
T Consensus 34 ~~k~liVtd~~v~----~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~-----~~v~~~~~~~~~~--~~~r~d~iIal 101 (368)
T 2gru_A 34 FDQYIMISDSGVP----DSIVHYAAEYFGKL-APVHILRFQGGEEYKTL-----STVTNLQERAIAL--GANRRTAIVAV 101 (368)
T ss_dssp CSEEEEEEETTSC----HHHHHHHHHHHTTT-SCEEEEEECCSGGGCSH-----HHHHHHHHHHHHT--TCCTTEEEEEE
T ss_pred CCEEEEEECCcHH----HHHHHHHHHHHHhc-cceeEEEeCCCCCCCCH-----HHHHHHHHHHHhc--CCCCCcEEEEE
Confidence 4566555432211 12334555455332 122 456665444422 2345566665431 11114678889
Q ss_pred CchhH--HHHHHHHHhcCCCCCeEEEEee
Q 019410 255 GSGGT--IAGLSLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 255 GtGGt--~aGl~~~~k~~~~~~rVigVe~ 281 (341)
|+|.. ++|.+.+.+. +.+++|.|..
T Consensus 102 GGGsv~D~ak~~Aa~~~--rgip~i~IPT 128 (368)
T 2gru_A 102 GGGLTGNVAGVAAGMMF--RGIALIHVPT 128 (368)
T ss_dssp ESHHHHHHHHHHHHHBT--TCCEEEEEEC
T ss_pred CChHHHHHHHHHHHHhc--CCCCEEEECC
Confidence 98776 5666555433 5678898887
No 357
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=30.33 E-value=81 Score=27.19 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=24.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+ ++.-|.++|....+.|.+++++-+.
T Consensus 11 ~vlIT-Ga-s~gIG~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 11 VALIT-GA-GSGFGEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCC
Confidence 34555 54 4688999999999999997777543
No 358
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=30.29 E-value=2.5e+02 Score=23.70 Aligned_cols=94 Identities=13% Similarity=-0.004 Sum_probs=0.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECCccccccCcHHHHHHHH
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILK 201 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a 201 (341)
++++.+|+ |..|..+|......|. ++++-++.. ++..++ .|.+++.-+...
T Consensus 10 ~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~-----------~~~~~~-~~~~~i~gd~~~-------------- 60 (234)
T 2aef_A 10 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENV-----------RKKVLR-SGANFVHGDPTR-------------- 60 (234)
T ss_dssp CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGG-----------HHHHHH-TTCEEEESCTTC--------------
T ss_pred CEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHH-----------HHHHHh-cCCeEEEcCCCC--------------
Q ss_pred HHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEE
Q 019410 202 EKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHA 278 (341)
Q Consensus 202 ~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVig 278 (341)
.|.+++..- ...|.||++++.--.-.=++...+..+++.+|++
T Consensus 61 ------------------------------~~~l~~a~i----~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 61 ------------------------------VSDLEKANV----RGARAVIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp ------------------------------HHHHHHTTC----TTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred ------------------------------HHHHHhcCc----chhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEE
No 359
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=30.16 E-value=2.4e+02 Score=24.49 Aligned_cols=72 Identities=15% Similarity=0.086 Sum_probs=42.9
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCC-CcEEeCCCCCch-hHHHHHHHHHHHHHHHHhcCCCCCCC
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR-RPYVIPVGGSNS-IGTWGYIEAIKEIEQQLQTGTGGVKF 247 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~-~~~~ip~g~~n~-~~~~G~~t~a~EI~~Ql~~~~~g~~~ 247 (341)
.+.+...|++|+.+.+.. ...++..+++.+.++ +..+++.+-.++ ... ..+..++.++.+ .+
T Consensus 29 a~~L~~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v---~~~~~~~~~~~g------~i 92 (311)
T 3o26_A 29 CKQLSSNGIMVVLTCRDV-------TKGHEAVEKLKNSNHENVVFHQLDVTDPIATM---SSLADFIKTHFG------KL 92 (311)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHH---HHHHHHHHHHHS------SC
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHHHhcCCCceEEEEccCCCcHHHH---HHHHHHHHHhCC------CC
Confidence 344455799999998642 112344555555432 345565555555 332 234556666653 69
Q ss_pred CEEEEcCCch
Q 019410 248 DDIVVACGSG 257 (341)
Q Consensus 248 D~Ivv~vGtG 257 (341)
|.||..+|..
T Consensus 93 D~lv~nAg~~ 102 (311)
T 3o26_A 93 DILVNNAGVA 102 (311)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCccc
Confidence 9999999975
No 360
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=30.14 E-value=73 Score=27.87 Aligned_cols=12 Identities=0% Similarity=-0.100 Sum_probs=8.6
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 192 ~gI~vn~v~PG~ 203 (266)
T 4egf_A 192 HGIRANSVCPTV 203 (266)
T ss_dssp GTEEEEEEEESC
T ss_pred hCeEEEEEEeCC
Confidence 358888888754
No 361
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=29.94 E-value=2.7e+02 Score=23.93 Aligned_cols=12 Identities=8% Similarity=0.066 Sum_probs=8.8
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 200 ~gi~v~~v~PG~ 211 (262)
T 3rkr_A 200 HQVRVSLVAPGS 211 (262)
T ss_dssp GTCEEEEEEECC
T ss_pred cCcEEEEEecCC
Confidence 468888888754
No 362
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=29.88 E-value=73 Score=25.66 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=25.2
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
|+..|| |-.|..+|...+++|++++++-+..
T Consensus 4 vvIIGg--G~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 4 VIVVGG--GPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred EEEECC--CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 444565 7899999999999999999987643
No 363
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.71 E-value=94 Score=27.96 Aligned_cols=31 Identities=13% Similarity=0.025 Sum_probs=23.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
++|...|. |+.|+++|..++.+|.+++++-+
T Consensus 158 ~~v~IiG~--G~iG~~~a~~l~~~G~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGL--GRTGMTIARTFAALGANVKVGAR 188 (300)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcc--cHHHHHHHHHHHHCCCEEEEEEC
Confidence 45655664 89999999999999987666543
No 364
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=29.66 E-value=73 Score=29.65 Aligned_cols=61 Identities=18% Similarity=0.251 Sum_probs=35.6
Q ss_pred EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC--EEEEcCCchhH--HHHHHHHHhcCCCCCeEEEEeeCC
Q 019410 212 YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD--DIVVACGSGGT--IAGLSLGSWLGTLKAKVHAFSVCD 283 (341)
Q Consensus 212 ~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D--~Ivv~vGtGGt--~aGl~~~~k~~~~~~rVigVe~~g 283 (341)
+.++.+-.||.- ....++.+++.+ ..+| .+|+++|+|.. ++|.+.+.. .+.++++.|..--
T Consensus 62 ~~~~~~e~~p~~-----~~v~~~~~~~~~----~~~~r~d~iIavGGGsv~D~ak~vA~~~--~rgip~i~IPTT~ 126 (354)
T 1xah_A 62 VIIPAGEKTKTF-----EQYQETLEYILS----HHVTRNTAIIAVGGGATGDFAGFVAATL--LRGVHFIQVPTTI 126 (354)
T ss_dssp EEECSGGGGCSH-----HHHHHHHHHHHT----TCCCTTCEEEEEESHHHHHHHHHHHHHB--TTCCEEEEEECST
T ss_pred EEECCCCCCCCH-----HHHHHHHHHHHH----cCCCCCceEEEECChHHHHHHHHHHHHh--ccCCCEEEECCcc
Confidence 345544444432 234566666653 2353 57788998776 555555443 3667899888653
No 365
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=29.60 E-value=2.3e+02 Score=24.94 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=23.0
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeC
Q 019410 249 DIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVC 282 (341)
Q Consensus 249 ~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~ 282 (341)
.-++++++|.|..+++..+....+...+..|...
T Consensus 57 ~~viGla~G~T~~~~~~~l~~~~~~~~v~~v~L~ 90 (255)
T 2okg_A 57 KNIVAVTGGTTIEAVAEMMTPDSKNRELLFVPAR 90 (255)
T ss_dssp EEEEEECCSHHHHHHHHHCCCCTTCCEEEEEESE
T ss_pred CCEEEECCcHHHHHHHHhhccccCCCCCEEEECC
Confidence 4578899999999999988653122344444443
No 366
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=29.56 E-value=2.9e+02 Score=24.19 Aligned_cols=11 Identities=0% Similarity=-0.239 Sum_probs=8.4
Q ss_pred CCCeEEEEeeC
Q 019410 272 LKAKVHAFSVC 282 (341)
Q Consensus 272 ~~~rVigVe~~ 282 (341)
..++|..|.+.
T Consensus 187 ~gI~vn~v~PG 197 (285)
T 3sc4_A 187 AGIASNTLWPR 197 (285)
T ss_dssp GTCEEEEEECS
T ss_pred cCcEEEEEeCC
Confidence 35889888875
No 367
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=29.54 E-value=93 Score=26.80 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=35.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
+++..|+ +|.-|.++|....+.|.+++++.+..... .......++..|.++..+..
T Consensus 23 ~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~l~~~~~~~~~~~~ 78 (274)
T 1ja9_A 23 VALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKA------AEEVVAELKKLGAQGVAIQA 78 (274)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHH------HHHHHHHHHhcCCcEEEEEe
Confidence 3443454 47899999999999999988776522210 01112345556877766653
No 368
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=29.51 E-value=2.2e+02 Score=27.56 Aligned_cols=61 Identities=16% Similarity=0.194 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcch-hHHHHHhCCCEEEE
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIG-NLLVERLVGAHIEL 182 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~g-n~~~~~~~GAeV~~ 182 (341)
..+.|+..|+ |+.|.-+|...+++|.+++++.+........++.... -.+.++..|.+++.
T Consensus 150 ~~~~vvViGg--G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~ 211 (565)
T 3ntd_A 150 NVEHATVVGG--GFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRL 211 (565)
T ss_dssp TCSEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEe
Confidence 3456766776 8999999999999999999998754321111110000 12345667777653
No 369
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=29.50 E-value=2.7e+02 Score=23.83 Aligned_cols=31 Identities=19% Similarity=-0.005 Sum_probs=21.5
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+++..|+ +|--|+++|....+.|.+++++.+
T Consensus 6 ~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 6 VAVVTGS-TSGIGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEeCC-CcHHHHHHHHHHHHcCCEEEEEeC
Confidence 3433454 467899999888888888666543
No 370
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=29.42 E-value=2.2e+02 Score=25.32 Aligned_cols=49 Identities=14% Similarity=0.017 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 106 VRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 106 ~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
.+.++.+.....-.+.+.+|| | .+|--|..++......|.+++++.+..
T Consensus 11 ~~~~~~~~~~~~~~~~~vlVt-G-atG~iG~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 11 MSRYEEITQQLIFSPKTWLIT-G-VAGFIGSNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp CHHHHHHHHHHHHSCCEEEEE-T-TTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHhhHHhhCCCCCCeEEEE-C-CCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 344544444433344444555 5 458999999999999999999888754
No 371
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=29.19 E-value=87 Score=26.61 Aligned_cols=40 Identities=23% Similarity=0.188 Sum_probs=30.6
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCC
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
++.|.++||.+|- ..|.| .+.|.-|..+|++++++.+...
T Consensus 119 ~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~a 159 (197)
T 4h17_A 119 QELGHLDLIVCGF-MSHSSVSTTVRRAKDYGYRCTLVEDASA 159 (197)
T ss_dssp HHHTCSEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhcCCCEEEEEee-CcCHHHHHHHHHHHHCCCEEEEeCcccc
Confidence 4568999998764 44555 5788899999999999987544
No 372
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=29.14 E-value=2.1e+02 Score=24.11 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=41.4
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+.+..-.. .+.+.+++...+.+..++..+-.++... ..+..++.++.+ .+|.
T Consensus 24 a~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~---~~~~~~~~~~~g------~id~ 88 (258)
T 3afn_B 24 ARLFARAGAKVGLHGRKAPAN------IDETIASMRADGGDAAFFAADLATSEAC---QQLVDEFVAKFG------GIDV 88 (258)
T ss_dssp HHHHHHTTCEEEEEESSCCTT------HHHHHHHHHHTTCEEEEEECCTTSHHHH---HHHHHHHHHHHS------SCSE
T ss_pred HHHHHHCCCEEEEECCCchhh------HHHHHHHHHhcCCceEEEECCCCCHHHH---HHHHHHHHHHcC------CCCE
Confidence 334445799999887641111 1334445554443445565554555433 344566666653 6999
Q ss_pred EEEcCCc
Q 019410 250 IVVACGS 256 (341)
Q Consensus 250 Ivv~vGt 256 (341)
||..+|.
T Consensus 89 vi~~Ag~ 95 (258)
T 3afn_B 89 LINNAGG 95 (258)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
No 373
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.05 E-value=2.8e+02 Score=23.96 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=22.6
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 24 ~lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 24 ALVT-GG-SRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4555 54 478999999999999988777654
No 374
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=28.98 E-value=1.2e+02 Score=26.09 Aligned_cols=33 Identities=6% Similarity=0.007 Sum_probs=23.6
Q ss_pred CeEEEeCCCc-chHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~-GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+++ +--|.++|..-.+.|.+++++-+.
T Consensus 9 ~vlVT-Gasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 9 NIVVM-GVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEEE-CCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEE-cCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 34555 5442 238999999999999998777654
No 375
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=28.97 E-value=1.3e+02 Score=29.61 Aligned_cols=46 Identities=15% Similarity=0.036 Sum_probs=32.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
++|+..|. |+-|..+|..++.+|.+++++-+. ..+....+.+|+++
T Consensus 275 ktV~IiG~--G~IG~~~A~~lka~Ga~Viv~d~~-----------~~~~~~A~~~Ga~~ 320 (494)
T 3ce6_A 275 KKVLICGY--GDVGKGCAEAMKGQGARVSVTEID-----------PINALQAMMEGFDV 320 (494)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSC-----------HHHHHHHHHTTCEE
T ss_pred CEEEEEcc--CHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHcCCEE
Confidence 56666674 899999999999999975554221 12455677889874
No 376
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=28.95 E-value=1.3e+02 Score=27.98 Aligned_cols=156 Identities=10% Similarity=-0.041 Sum_probs=71.1
Q ss_pred HHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCC-----C---cCCCCCcchh--HHHHHhCCC-EEE
Q 019410 113 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----L---VDQDPGLIGN--LLVERLVGA-HIE 181 (341)
Q Consensus 113 l~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~-----~---~~~~~~~~gn--~~~~~~~GA-eV~ 181 (341)
+.....++.+.||... . + ..+...+...|++++++-..... . +..+....+. .+.+...|. +|.
T Consensus 69 i~~l~~~~vDGiIi~~-~--~--~~~~~~l~~~~iPvV~i~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~r~I~ 143 (412)
T 4fe7_A 69 IDKIKDWLGDGVIADF-D--D--KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 143 (412)
T ss_dssp ------CCCSEEEEET-T--C--HHHHHHHTTCCSCEEEEEECCSSGGGSCSSEEEEECHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhHhcCCCCEEEEec-C--C--hHHHHHHhhCCCCEEEecCCccccccCCCCCEEEeCHHHHHHHHHHHHHHcCCceEE
Confidence 3445567788888632 1 1 23344556779998877543211 0 0000000011 222333464 566
Q ss_pred EECCcccccc-CcHHHHHHHHHHHHHhCCCcEEeCCCCCchhH-HHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhH
Q 019410 182 LISKEEYSKI-GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 259 (341)
Q Consensus 182 ~v~~~~~~~~-~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~-~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt 259 (341)
++........ ...++.+.+.+.+++.+....++......... ..++ ....+++++. .++|+||+ .+...
T Consensus 144 ~i~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~aI~~--~nD~~ 214 (412)
T 4fe7_A 144 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQ-NRLADWLQTL------PPQTGIIA--VTDAR 214 (412)
T ss_dssp EECCCTTSCCHHHHHHHHHHHHHHTTSSSCCEEECCSCSSCSSHHHHH-HHHHHHHHHS------CTTEEEEE--SSHHH
T ss_pred EecccccccccHHHHHHHHHHHHHHHcCCCccccccccccccchhhHH-HHHHHHHHhC------CCCeEEEE--EecHH
Confidence 6653211100 01122333444444444223333322111111 1233 2333444432 36899986 46677
Q ss_pred HHHHHHHHhcCCC----CCeEEEEeeC
Q 019410 260 IAGLSLGSWLGTL----KAKVHAFSVC 282 (341)
Q Consensus 260 ~aGl~~~~k~~~~----~~rVigVe~~ 282 (341)
+.|+..+++..+. ++.|+|++-.
T Consensus 215 A~g~~~al~~~G~~vP~disvig~D~~ 241 (412)
T 4fe7_A 215 ARHILQVCEHLHIPVPEKLCVIGIDNE 241 (412)
T ss_dssp HHHHHHHHHHHTCCTTTTSEEEESSCC
T ss_pred HHHHHHHHHHcCCCCCceEEEEeecch
Confidence 8899999987653 6889987743
No 377
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=28.92 E-value=1.6e+02 Score=25.28 Aligned_cols=33 Identities=3% Similarity=-0.013 Sum_probs=23.3
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
++++..|+ +|--|.++|..-...|.+++++.+.
T Consensus 8 k~vlVTGa-s~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 8 RHALITAG-TKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC-CchhHHHHHHHHHHCCCEEEEEcCC
Confidence 34443454 4678889998888889988777554
No 378
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=28.87 E-value=2.7e+02 Score=23.61 Aligned_cols=70 Identities=14% Similarity=0.148 Sum_probs=0.0
Q ss_pred HHHHHhCCCEEEEECC-ccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 019410 170 LLVERLVGAHIELISK-EEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD 248 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~-~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D 248 (341)
.+.+...|++|+.+.+ .. +..+++.+++.+.+....++..+-.++.. ...+..++.++.+ .+|
T Consensus 24 a~~l~~~G~~V~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~g------~id 87 (261)
T 1gee_A 24 AIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGGEAIAVKGDVTVESD---VINLVQSAIKEFG------KLD 87 (261)
T ss_dssp HHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCEEEEEECCTTSHHH---HHHHHHHHHHHHS------CCC
T ss_pred HHHHHHCCCEEEEEcCCCh-------HHHHHHHHHHHhcCCceEEEECCCCCHHH---HHHHHHHHHHHcC------CCC
Q ss_pred EEEEcCC
Q 019410 249 DIVVACG 255 (341)
Q Consensus 249 ~Ivv~vG 255 (341)
.||..+|
T Consensus 88 ~li~~Ag 94 (261)
T 1gee_A 88 VMINNAG 94 (261)
T ss_dssp EEEECCC
T ss_pred EEEECCC
No 379
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=28.81 E-value=82 Score=30.13 Aligned_cols=49 Identities=18% Similarity=0.014 Sum_probs=34.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
.+|+..|+ |..|..+|..++.+|.+++++ +... .++..++.+|++.+.+
T Consensus 185 ~kV~ViG~--G~iG~~aa~~a~~lGa~V~v~-D~~~----------~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 185 ASALVLGV--GVAGLQALATAKRLGAKTTGY-DVRP----------EVAEQVRSVGAQWLDL 233 (381)
T ss_dssp CEEEEESC--SHHHHHHHHHHHHHTCEEEEE-CSSG----------GGHHHHHHTTCEECCC
T ss_pred CEEEEECc--hHHHHHHHHHHHHCCCEEEEE-eCCH----------HHHHHHHHcCCeEEec
Confidence 35666675 899999999999999975544 3221 2467778899986543
No 380
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=28.81 E-value=67 Score=29.94 Aligned_cols=32 Identities=31% Similarity=0.301 Sum_probs=25.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
++|...|+ |..|+.+|.+|+++|++++++-+.
T Consensus 15 k~IlIlG~--G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 15 KTIGIIGG--GQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEeCC
Confidence 35555565 678999999999999999988654
No 381
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=28.67 E-value=1.1e+02 Score=26.52 Aligned_cols=156 Identities=13% Similarity=0.058 Sum_probs=74.8
Q ss_pred HHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCC----C--cchh---HHHHHhCC--CE
Q 019410 111 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP----G--LIGN---LLVERLVG--AH 179 (341)
Q Consensus 111 ~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~----~--~~gn---~~~~~~~G--Ae 179 (341)
..+.....++.+.||..+. ..+........++..|++++++-...... ...+ . .-+. ..+++.+| .+
T Consensus 48 ~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~-~~~~~V~~D~~~~g~~a~~~L~~~~gg~~~ 125 (283)
T 2ioy_A 48 SNVEDLIQQKVDVLLINPV-DSDAVVTAIKEANSKNIPVITIDRSANGG-DVVCHIASDNVKGGEMAAEFIAKALKGKGN 125 (283)
T ss_dssp HHHHHHHHTTCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCSSS-CCSEEEEECHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHcCCCEEEEeCC-chhhhHHHHHHHHHCCCeEEEecCCCCCc-ceeEEEecChHHHHHHHHHHHHHHcCCCce
Confidence 3456666778999886542 22222223344667899987764321110 0000 0 0011 12333435 35
Q ss_pred EEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeC--CCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCch
Q 019410 180 IELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIP--VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 257 (341)
Q Consensus 180 V~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip--~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtG 257 (341)
|.++....... ...++.+-+.+.+++. ++.-++. .+..+. ..|+ ..+.+++++- .++|+||+ .+.
T Consensus 126 I~~i~g~~~~~-~~~~R~~Gf~~al~~~-~~~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~--~nD 192 (283)
T 2ioy_A 126 VVELEGIPGAS-AARDRGKGFDEAIAKY-PDIKIVAKQAADFDR--SKGL-SVMENILQAQ------PKIDAVFA--QND 192 (283)
T ss_dssp EEEEECCTTCH-HHHHHHHHHHHHHTTC-TTEEEEEEEECTTCH--HHHH-HHHHHHHHHC------SCCCEEEE--SSH
T ss_pred EEEEECCCCCc-cHHHHHHHHHHHHHhC-CCCEEEeeccCCCCH--HHHH-HHHHHHHHhC------CCccEEEE--CCc
Confidence 66664321100 0112223333344332 1211111 111122 2233 2345555432 36899887 455
Q ss_pred hHHHHHHHHHhcCCC-CCeEEEEee
Q 019410 258 GTIAGLSLGSWLGTL-KAKVHAFSV 281 (341)
Q Consensus 258 Gt~aGl~~~~k~~~~-~~rVigVe~ 281 (341)
.++.|+..+++..|. ++.|+|++-
T Consensus 193 ~~A~g~~~al~~~G~~di~viG~D~ 217 (283)
T 2ioy_A 193 EMALGAIKAIEAANRQGIIVVGFDG 217 (283)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred hHHHHHHHHHHHCCCCCcEEEEeCC
Confidence 678899999998775 888988774
No 382
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=28.49 E-value=2.5e+02 Score=26.28 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=30.7
Q ss_pred EEEeCCCcchHHHHHHHHHHHc--CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYL--NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~--Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
++|.| ++.+..++..+-.. . ..+++ +... ...-...++..|++++.++-
T Consensus 101 ~~t~G---~~~al~~~~~~l~~~~~-d~Vlv-~~P~--------y~~~~~~~~~~g~~~~~v~~ 151 (405)
T 3k7y_A 101 IQCIG---GTGAIFVLLEFLKMLNV-ETLYV-TNPP--------YINHVNMIESRGFNLKYINF 151 (405)
T ss_dssp EEEEH---HHHHHHHHHHHHHTTTC-CEEEE-ESSC--------CHHHHHHHHTTTCEEEEECC
T ss_pred EEcCc---hHHHHHHHHHHHHhcCC-CEEEE-eCCC--------CHhHHHHHHHcCCeEEEEec
Confidence 56766 46666666555444 5 55544 3222 23457788999999999863
No 383
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=28.39 E-value=1.4e+02 Score=26.44 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=25.5
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
.+|| |+ +|+.|.+++......|.+++++.+..
T Consensus 14 ilVt-Ga-tG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 14 ILIF-GG-TGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp EEEE-TT-TSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCcEEEEECCC
Confidence 4444 54 58999999999999999998888754
No 384
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=28.02 E-value=74 Score=28.33 Aligned_cols=32 Identities=6% Similarity=-0.141 Sum_probs=25.5
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEee
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~ 281 (341)
.+|+||+ .++.++.|+..++++.+ +.|+|++-
T Consensus 181 ~~daI~~--~~D~~a~Gv~~a~~e~G--v~viG~D~ 212 (296)
T 2hqb_A 181 QVDVFYP--AGDGYHVPVVEAIKDQG--DFAIGYVG 212 (296)
T ss_dssp TCCEEEC--CCTTTHHHHHHHHHHHT--CEEEEEES
T ss_pred CCcEEEE--CCCCCCHHHHHHHHHcC--CEEEEEec
Confidence 3898885 45667788999998866 89999985
No 385
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=27.97 E-value=2.8e+02 Score=23.65 Aligned_cols=11 Identities=9% Similarity=0.051 Sum_probs=8.1
Q ss_pred CCeEEEEeeCC
Q 019410 273 KAKVHAFSVCD 283 (341)
Q Consensus 273 ~~rVigVe~~g 283 (341)
.++|..|.+..
T Consensus 181 gi~v~~v~Pg~ 191 (260)
T 2ae2_A 181 NIRVNGVGPGV 191 (260)
T ss_dssp TEEEEEEEECS
T ss_pred CcEEEEEecCC
Confidence 68888887653
No 386
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=27.96 E-value=3.1e+02 Score=24.01 Aligned_cols=34 Identities=18% Similarity=0.005 Sum_probs=24.6
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |+ +|--|+++|..-.+.|.+++++-+.
T Consensus 29 gk~vlVT-Ga-s~gIG~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVT-GA-GAGIGLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEET-TT-TSTHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3334454 54 4689999999999999988777543
No 387
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=27.83 E-value=37 Score=32.91 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=25.6
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcC-CCCCeEEEEeeCCC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDD 284 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~-~~~~rVigVe~~g~ 284 (341)
..+|+|||..|++|. +.+.++. .++.+|.-+|.-+.
T Consensus 16 ~~yD~IIVGsG~aG~----v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGS----LLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHH----HHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHH----HHHHHHHhCCCCeEEEEcCCCC
Confidence 368999998887765 4455543 47789999997654
No 388
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=27.78 E-value=24 Score=31.02 Aligned_cols=64 Identities=19% Similarity=0.183 Sum_probs=41.1
Q ss_pred ccccccCCC-----CCchHhHHHHHHHHHHHHcC-CCeEEEeCCCcchHHHHHHHH--HHHcCCeEEEEEcCCC
Q 019410 92 QRDDLSGMQ-----LSGNKVRKLEFLMADAVAQG-ADCIITIGGIQSNHCRAAAVA--AKYLNLDCYLILRTSK 157 (341)
Q Consensus 92 ~REDl~~~~-----~ggnK~Rkl~~ll~~A~~~g-~~~vVt~G~s~GNhg~AlA~a--a~~~Gl~~~ivvp~~~ 157 (341)
+|-||..+. .-|+-+..+...+...+... ...++-.|+ ||.|+++|.+ ....|++++.+++.+.
T Consensus 49 iRkDls~fg~~G~~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGa--G~lG~aLa~~~~~~~~g~~iVg~~D~dp 120 (212)
T 3keo_A 49 VRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGC--GNIGRALLHYRFHDRNKMQISMAFDLDS 120 (212)
T ss_dssp HHHHHHTTGGGTTTSSSEEHHHHHHHHHHHTTTTSCEEEEEECC--SHHHHHHTTCCCCTTSSEEEEEEEECTT
T ss_pred HHHHHHHHhhcCCCCCCEEHHHHHHHHHHHhCCCCCCEEEEECc--CHHHHHHHHhhhcccCCeEEEEEEeCCc
Confidence 688886531 12445555655555544222 234555676 8999999987 3457899999998654
No 389
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=27.76 E-value=1.3e+02 Score=26.76 Aligned_cols=53 Identities=8% Similarity=-0.024 Sum_probs=30.2
Q ss_pred eEEEeCCCcchHH---HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 123 CIITIGGIQSNHC---RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 123 ~vVt~G~s~GNhg---~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
.+|.+| . ||.| ..+|..-+..|+++.++++.... . ++....+++..+.+|..+
T Consensus 61 v~VlcG-~-GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~-~--~~~~~~~~~~~~~~g~~~ 116 (246)
T 1jzt_A 61 VFVIAG-P-GNNGGDGLVCARHLKLFGYNPVVFYPKRSE-R--TEFYKQLVHQLNFFKVPV 116 (246)
T ss_dssp EEEEEC-S-SHHHHHHHHHHHHHHHTTCCEEEECCCCCT-T--CHHHHHHHHHHHHTTCCE
T ss_pred EEEEEC-C-CCCHHHHHHHHHHHHHCCCeEEEEEcCCCC-C--CHHHHHHHHHHHHcCCcE
Confidence 345565 3 5554 45555566689999999765321 1 111233456666777655
No 390
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=27.55 E-value=2.8e+02 Score=23.52 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=24.7
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcC---CeEEEEEcCC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLN---LDCYLILRTS 156 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~G---l~~~ivvp~~ 156 (341)
+++..|+ +|--|.++|....+.| .+++++.+..
T Consensus 23 ~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~ 58 (267)
T 1sny_A 23 SILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNR 58 (267)
T ss_dssp EEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred EEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence 3443454 4789999999999999 8888877653
No 391
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=27.40 E-value=64 Score=24.61 Aligned_cols=30 Identities=7% Similarity=-0.026 Sum_probs=22.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+|+..|+ |..|..+|......|.+++++-+
T Consensus 8 ~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGL--GRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp SEEEECC--SHHHHHHHHHHHHTTCCCEEEES
T ss_pred cEEEECC--CHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444564 89999999999999988776643
No 392
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=27.35 E-value=1.8e+02 Score=26.99 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=27.5
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
+|.-.|-. +|.+++++.+++++|++++++-|..-
T Consensus 157 ~va~vGD~-~rva~Sl~~~~~~~g~~v~~~~P~~~ 190 (315)
T 1pvv_A 157 KVVYVGDG-NNVAHSLMIAGTKLGADVVVATPEGY 190 (315)
T ss_dssp EEEEESCC-CHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred EEEEECCC-cchHHHHHHHHHHCCCEEEEECCccc
Confidence 44445543 89999999999999999999998654
No 393
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=27.19 E-value=65 Score=29.93 Aligned_cols=30 Identities=13% Similarity=0.014 Sum_probs=25.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
.+|...|+ |-.|.++|+.++..|++++++=
T Consensus 7 ~~VaViGa--G~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 7 GDVLIVGS--GLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECC--cHHHHHHHHHHHhCCCeEEEEE
Confidence 45555675 8999999999999999999884
No 394
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=27.06 E-value=1.4e+02 Score=26.64 Aligned_cols=53 Identities=8% Similarity=-0.017 Sum_probs=29.2
Q ss_pred eEEEeCCCcchHH---HHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 123 CIITIGGIQSNHC---RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 123 ~vVt~G~s~GNhg---~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
.+|.+| . ||.| ..+|...+..|+++.+++...... ......+++..+..|..+
T Consensus 88 vlVlcG-~-GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~---~~~a~~~~~~~~~~g~~~ 143 (259)
T 3d3k_A 88 VALLCG-P-HVKGAQGISCGRHLANHDVQVILFLPNFVKM---LESITNELSLFSKTQGQQ 143 (259)
T ss_dssp EEEEEC-S-SHHHHHHHHHHHHHHHTTCEEEEECCBCSSC---CHHHHHHHHHHTTSSCEE
T ss_pred EEEEEC-C-CCCHHHHHHHHHHHHHCCCeEEEEEecCCCC---CHHHHHHHHHHHHcCCCc
Confidence 345565 3 5554 455556666899999987653211 011123455555667554
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=26.93 E-value=1.2e+02 Score=29.19 Aligned_cols=49 Identities=14% Similarity=0.046 Sum_probs=34.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 183 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v 183 (341)
.+|+..|+ |..|.++|..++.+|.+++++ +... .++..++.+|++.+.+
T Consensus 191 ~kV~ViG~--G~iG~~aa~~a~~lGa~V~v~-D~~~----------~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 191 AKIFVMGA--GVAGLQAIATARRLGAVVSAT-DVRP----------AAKEQVASLGAKFIAV 239 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEE-CSST----------THHHHHHHTTCEECCC
T ss_pred CEEEEECC--cHHHHHHHHHHHHCCCEEEEE-cCCH----------HHHHHHHHcCCceeec
Confidence 45666675 899999999999999975544 3221 1466777899986443
No 396
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=26.86 E-value=1e+02 Score=28.59 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=36.6
Q ss_pred eEEEeCCC-cchHHHHHHHHHHHc-CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 123 CIITIGGI-QSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 123 ~vVt~G~s-~GNhg~AlA~aa~~~-Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
+|.-.|-. .+|.+++++.+++++ |++++++-|..-.. + ..-+..++..|+++..+.
T Consensus 156 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~-~-----~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAM-P-----QYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCC-C-----HHHHHHHHHTTCCEEECS
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCccccc-C-----HHHHHHHHHcCCeEEEEc
Confidence 34444532 379999999999999 99999998865411 0 112345556677765554
No 397
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=26.80 E-value=58 Score=30.01 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=23.0
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |-.|.++|+.+++.|++++|+=.
T Consensus 7 VvIIGa--G~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 7 VVVVGG--GPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECC--CHHHHHHHHHHHHCCCeEEEEeC
Confidence 344565 78999999999999999777643
No 398
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=26.78 E-value=1.8e+02 Score=27.85 Aligned_cols=56 Identities=4% Similarity=-0.101 Sum_probs=35.3
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHc------C---------CeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYL------N---------LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~------G---------l~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
..+++.|||.+|...-+|+.-+.+ | =+.+|+++.... ....+.++..|++++.++-
T Consensus 147 ~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H--------~s~~~~~~~~g~~~~~v~~ 217 (481)
T 4e1o_A 147 GGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAH--------SSVEKAGLISLVKMKFLPV 217 (481)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSC--------HHHHHHHHHHTCEEEEECC
T ss_pred ceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcch--------HHHHHHHHhCCCceEEEEc
Confidence 347788888888865554432211 1 246788876542 2235556678999999974
No 399
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.76 E-value=97 Score=25.67 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=24.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
+|| | .+|.-|.+++......|.+++++.+.
T Consensus 4 lVt-G-atG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 4 AVL-G-ATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEE-T-TTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEE-c-CCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 444 5 45899999999999999999998764
No 400
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=26.72 E-value=3.1e+02 Score=23.61 Aligned_cols=31 Identities=19% Similarity=0.086 Sum_probs=21.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |++ +--|.++|..-.+.|.+++++-+
T Consensus 10 ~~lVT-Gas-~GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 10 VAVVT-GGS-SGIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp EEEEE-TCS-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CCC-ChHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 544 67889999888888888666644
No 401
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=26.70 E-value=60 Score=29.35 Aligned_cols=28 Identities=29% Similarity=0.419 Sum_probs=22.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
|.+| .|| |=.|.++|+..++.|++++|+
T Consensus 6 DViI-VGa--GpaGl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 6 DVLV-VGG--GPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCcEEEE
Confidence 3444 455 688999999999999998887
No 402
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=26.67 E-value=1.7e+02 Score=25.30 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=6.1
Q ss_pred hCCCEEEEECC
Q 019410 175 LVGAHIELISK 185 (341)
Q Consensus 175 ~~GAeV~~v~~ 185 (341)
..|++++++++
T Consensus 171 ~~Gad~iVvGr 181 (215)
T 3ve9_A 171 CHGADYEIVGR 181 (215)
T ss_dssp HTTCSEEEECH
T ss_pred HcCCCEEEeCH
Confidence 44666555554
No 403
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=26.47 E-value=73 Score=28.42 Aligned_cols=30 Identities=7% Similarity=0.026 Sum_probs=24.4
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
++|...|+ |+.|.++|..++..|++++++-
T Consensus 5 ~kV~VIGa--G~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGT--GVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEe
Confidence 45555665 8999999999999999887763
No 404
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=26.38 E-value=63 Score=28.75 Aligned_cols=12 Identities=17% Similarity=0.052 Sum_probs=8.9
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 180 ~gIrvn~v~PG~ 191 (280)
T 3tox_A 180 RGIRVNALLPGG 191 (280)
T ss_dssp TTEEEEEEEECS
T ss_pred cCeEEEEEEECC
Confidence 468998888753
No 405
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=26.37 E-value=3.2e+02 Score=23.77 Aligned_cols=30 Identities=30% Similarity=0.189 Sum_probs=19.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
++++..|+ +|--|.++|..-.+.|.+++++
T Consensus 29 k~~lVTGa-s~GIG~aia~~la~~G~~V~~~ 58 (272)
T 4dyv_A 29 KIAIVTGA-GSGVGRAVAVALAGAGYGVALA 58 (272)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHHHHHHHHHCCCEEEEE
Confidence 34333454 4678888888888788775554
No 406
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=26.21 E-value=2.9e+02 Score=23.23 Aligned_cols=156 Identities=11% Similarity=0.084 Sum_probs=73.8
Q ss_pred HHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCC-C---cCCCCCcchh--HHHHHhCCC-EEE
Q 019410 109 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-L---VDQDPGLIGN--LLVERLVGA-HIE 181 (341)
Q Consensus 109 l~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~-~---~~~~~~~~gn--~~~~~~~GA-eV~ 181 (341)
...++.....++.+.||..+... +. .....++..|++++++-..... . ...+....+. .+.+...|. +|.
T Consensus 48 ~~~~~~~l~~~~vdgii~~~~~~-~~--~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~ 124 (275)
T 3d8u_A 48 EEKLLSTFLESRPAGVVLFGSEH-SQ--RTHQLLEASNTPVLEIAELSSKASYLNIGVDHFEVGKACTRHLIEQGFKNVG 124 (275)
T ss_dssp HHHHHHHHHTSCCCCEEEESSCC-CH--HHHHHHHHHTCCEEEESSSCSSSSSEEECBCHHHHHHHHHHHHHTTTCCCEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCCC-CH--HHHHHHHhCCCCEEEEeeccCCCCCCEEEEChHHHHHHHHHHHHHCCCCeEE
Confidence 33456666778889888765322 22 2233445679998877432111 0 0000000111 122233464 455
Q ss_pred EECCc-cccccCcHHHHHHHHHHHHHhCCC--cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchh
Q 019410 182 LISKE-EYSKIGSVTLTNILKEKLLKEGRR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 258 (341)
Q Consensus 182 ~v~~~-~~~~~~~~~~~~~~a~~l~~~g~~--~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGG 258 (341)
++... .+.. ...+.+.+.+.+++.+.. ..++..+..+. ..++ ....+++++ ...+|+||+ .+..
T Consensus 125 ~i~~~~~~~~--~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~------~~~~~ai~~--~~d~ 191 (275)
T 3d8u_A 125 FIGARGNHST--LQRQLHGWQSAMIENYLTPDHFLTTHEAPSS--QLGA-EGLAKLLLR------DSSLNALVC--SHEE 191 (275)
T ss_dssp EEECSCSSHH--HHHHHHHHHHHHHHTTCCCCCEEECSSCCCH--HHHH-HHHHHHHTT------CTTCCEEEE--SSHH
T ss_pred EEcCCCCCch--HHHHHHHHHHHHHHcCCCCCccEEEeCCCCh--hHHH-HHHHHHHhC------CCCCCEEEE--cCcH
Confidence 55432 1110 112233344445554321 12222222222 1233 223344332 236899987 4567
Q ss_pred HHHHHHHHHhcCCC----CCeEEEEe
Q 019410 259 TIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 259 t~aGl~~~~k~~~~----~~rVigVe 280 (341)
++.|+..+++..+. ++.|+|++
T Consensus 192 ~a~g~~~al~~~g~~vP~di~vvg~d 217 (275)
T 3d8u_A 192 IAIGALFECHRRVLKVPTDIAIICLE 217 (275)
T ss_dssp HHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred HHHHHHHHHHHcCCCCCCceEEEecC
Confidence 88999999988764 46677754
No 407
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=26.20 E-value=1.8e+02 Score=24.92 Aligned_cols=44 Identities=11% Similarity=0.066 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEe
Q 019410 229 EAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFS 280 (341)
Q Consensus 229 t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe 280 (341)
....+++++- .++|+||+ .+...+.|+..+++..+. ++.|+|++
T Consensus 167 ~~~~~~l~~~------~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~d 214 (277)
T 3hs3_A 167 ISAQSALNKS------NQFDAIIT--VNDLYAAEIIKEAKRRNLKIPDDFQLVGYD 214 (277)
T ss_dssp HHHHHHHHTG------GGCSEEEC--SSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHHcCC------CCCCEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEeeC
Confidence 3445555442 36899886 567788899999998774 56787755
No 408
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.11 E-value=74 Score=27.69 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=25.0
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|...||| |+ +|--|.++|..-.+.|.+++++-+.
T Consensus 8 gk~~lVT-Ga-s~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVI-GG-THGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344555 54 4689999999999999988777553
No 409
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=25.94 E-value=3.1e+02 Score=23.43 Aligned_cols=31 Identities=13% Similarity=0.019 Sum_probs=25.2
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCC--CCeEEEE
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTL--KAKVHAF 279 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~--~~rVigV 279 (341)
++|+ |++ +...+.|+..+++..+. ++.|+|+
T Consensus 194 ~~~a-i~~--~d~~a~g~~~al~~~g~~~di~vvg~ 226 (304)
T 3o1i_D 194 NIDY-IVG--SAVAIEAAISELRSADKTHDIGLVSV 226 (304)
T ss_dssp CCSE-EEE--CHHHHHHHHHHHTTTTCGGGSEEBCS
T ss_pred CCCE-EEe--cCcchHHHHHHHHhcCCCCCeEEEEe
Confidence 6899 653 67889999999999886 7788875
No 410
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=25.88 E-value=68 Score=28.72 Aligned_cols=30 Identities=20% Similarity=0.020 Sum_probs=23.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|+..|| |-.|.++|+.+++.|++++|+=..
T Consensus 7 vvIIG~--G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 7 CIVIGA--GVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEeCC
Confidence 444565 789999999999999998887443
No 411
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=25.83 E-value=1.5e+02 Score=28.02 Aligned_cols=45 Identities=16% Similarity=0.016 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHH-cCC-----CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 107 RKLEFLMADAVA-QGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 107 Rkl~~ll~~A~~-~g~-----~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..+.++.+.+ .|. ++|+..|. ||-|+.+|..++.+|.+++ +.+
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~GktV~I~G~--GnVG~~~A~~l~~~GakVv-vsD 205 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDGLTVLVQGL--GAVGGSLASLAAEAGAQLL-VAD 205 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEE-EEC
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEECc--CHHHHHHHHHHHHCCCEEE-EEe
Confidence 456666666543 343 56666664 8999999999999999887 544
No 412
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=25.77 E-value=1.1e+02 Score=26.65 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=30.6
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCCC
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
++.|.++||.+|-. .|.| .+.|.-|..+|++++++.+...
T Consensus 147 ~~~gi~~lii~G~~-T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 187 (226)
T 3kl2_A 147 RSKGVDTIVLGGFL-TNCCVESTMRTGYERGFRVITLTDCVA 187 (226)
T ss_dssp HHHTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred hCCCCCcEEEeccC-cchHHHHHHHHHHHCCCEEEEechhhc
Confidence 45689999987644 4555 5788899999999999977544
No 413
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=25.70 E-value=57 Score=28.72 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=22.2
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
|+..|| |-.|.+.|..++++|+++++|
T Consensus 7 vvIIG~--GpAGl~AA~~la~~g~~v~li 33 (314)
T 4a5l_A 7 VVIIGS--GPAAHTAAIYLGRSSLKPVMY 33 (314)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 344565 678999999999999998887
No 414
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=25.42 E-value=1.5e+02 Score=28.68 Aligned_cols=63 Identities=14% Similarity=0.123 Sum_probs=36.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHH-cCCeEEEEEcCCCCCcCCC--CCc---chhHHHHHhCCCEEEEECC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQD--PGL---IGNLLVERLVGAHIELISK 185 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~-~Gl~~~ivvp~~~~~~~~~--~~~---~gn~~~~~~~GAeV~~v~~ 185 (341)
++++..|++ +--|+|+|...+. .|.+++++-++........ +.+ ..-...++..|.++..+..
T Consensus 62 KvaLVTGAS-sGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~ 130 (422)
T 3s8m_A 62 KKVLVIGAS-SGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSING 130 (422)
T ss_dssp SEEEEESCS-SHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCC-hHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEe
Confidence 444434554 5789999999999 9999888765443211000 000 0012456778888766654
No 415
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=25.28 E-value=1.3e+02 Score=26.18 Aligned_cols=32 Identities=19% Similarity=0.037 Sum_probs=24.2
Q ss_pred eEEEeCCC-cchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s-~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
.||| |++ +|.-|+++|....+.|.+++++-+.
T Consensus 10 vlVT-Ga~~s~gIG~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 10 ILVS-GIITDSSIAFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp EEEC-CCSSTTSHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEE-CCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 4454 652 5789999999999999997776543
No 416
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=25.24 E-value=3.2e+02 Score=23.27 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=32.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
..||| |+ +|--|+++|......|.+++++-+... .-....+.+|.++..+.-
T Consensus 8 ~vlVT-Ga-s~gIG~a~a~~l~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~ 59 (247)
T 3rwb_A 8 TALVT-GA-AQGIGKAIAARLAADGATVIVSDINAE----------GAKAAAASIGKKARAIAA 59 (247)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEECSCHH----------HHHHHHHHHCTTEEECCC
T ss_pred EEEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCCHH----------HHHHHHHHhCCceEEEEc
Confidence 34555 54 468999999999999998776643221 112333445777776653
No 417
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.18 E-value=2.9e+02 Score=23.36 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=24.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
.||| |+ +|.-|.++|..-.+.|.+++++.+.
T Consensus 17 vlIT-Ga-sggiG~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 17 IIVT-GG-NRGIGLAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCeEEEEeCc
Confidence 4555 54 4789999999999999988877664
No 418
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=25.17 E-value=2.8e+02 Score=23.75 Aligned_cols=31 Identities=23% Similarity=0.055 Sum_probs=23.7
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 10 ~vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 10 SALIT-GS-ARGIGRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp EEEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 54 478999999999999999777654
No 419
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=25.15 E-value=2.8e+02 Score=23.53 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=22.9
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCe-EEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLD-CYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~-~~ivvp 154 (341)
..+|| |+ +|--|.++|....+.|.+ ++++-+
T Consensus 7 ~vlVt-Ga-s~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 7 NVIFV-AA-LGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred EEEEE-CC-CChHHHHHHHHHHHCCCcEEEEEec
Confidence 34555 55 478999999999999997 555544
No 420
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=25.13 E-value=72 Score=29.05 Aligned_cols=27 Identities=11% Similarity=0.060 Sum_probs=22.7
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
|+..|| |=.|.++|.+-++.|++++||
T Consensus 4 V~IVGa--GpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 4 VGIIGA--GIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECc--CHHHHHHHHHHHhCCCCEEEE
Confidence 444565 789999999999999998887
No 421
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=25.05 E-value=68 Score=28.37 Aligned_cols=26 Identities=35% Similarity=0.313 Sum_probs=21.7
Q ss_pred EEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 125 ITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 125 Vt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
+..|| |-.|.+.|..++++|+++++|
T Consensus 10 vIIG~--GpAGl~aA~~l~~~g~~V~li 35 (312)
T 4gcm_A 10 AIIGA--GPAGMTAAVYASRANLKTVMI 35 (312)
T ss_dssp EEECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 33565 678999999999999999888
No 422
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=24.91 E-value=1.6e+02 Score=22.70 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=22.5
Q ss_pred CEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCC
Q 019410 248 DDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCD 283 (341)
Q Consensus 248 D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g 283 (341)
..+-+++|+|....-++..+ ++..+|+|++...
T Consensus 25 ~vLd~G~G~G~~~~~l~~~~---~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 25 TVVDLGAAPGGWSQYVVTQI---GGKGRIIACDLLP 57 (180)
T ss_dssp EEEEESCTTCHHHHHHHHHH---CTTCEEEEEESSC
T ss_pred eEEEeCCCCCHHHHHHHHHh---CCCCeEEEEECcc
Confidence 35667788877665554432 4567999999866
No 423
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=24.86 E-value=3.3e+02 Score=23.34 Aligned_cols=155 Identities=12% Similarity=0.040 Sum_probs=75.1
Q ss_pred HHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCC----CcCCCCCcchh--HHHHHhCCC-EEEEEC
Q 019410 112 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV----LVDQDPGLIGN--LLVERLVGA-HIELIS 184 (341)
Q Consensus 112 ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~----~~~~~~~~~gn--~~~~~~~GA-eV~~v~ 184 (341)
+++....++.+.||..+... + ...+ ..++..|++++++-..... ....+....+. .+.+...|- +|-++.
T Consensus 59 ~~~~l~~~~vdgiIi~~~~~-~-~~~~-~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~ 135 (290)
T 2rgy_A 59 AVRFLIGRDCDGVVVISHDL-H-DEDL-DELHRMHPKMVFLNRAFDALPDASFCPDHRRGGELAAATLIEHGHRKLAVIS 135 (290)
T ss_dssp HHHHHHHTTCSEEEECCSSS-C-HHHH-HHHHHHCSSEEEESSCCTTSGGGEECCCHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHhcCccEEEEecCCC-C-HHHH-HHHhhcCCCEEEEccccCCCCCCEEEeCcHHHHHHHHHHHHHCCCceEEEEe
Confidence 56666678899998764322 2 1222 3345579998776432110 00000000011 122223464 355554
Q ss_pred Cc-cccccCcHHHHHHHHHHHHHhCCC---cEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHH
Q 019410 185 KE-EYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 260 (341)
Q Consensus 185 ~~-~~~~~~~~~~~~~~a~~l~~~g~~---~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~ 260 (341)
.. ... ....+.+.+.+.+++.+-. .+++. +..+. ..|+ ....+++++- .++|+||+ .+..++
T Consensus 136 ~~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~~~~-~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~--~~d~~A 201 (290)
T 2rgy_A 136 GPFTAS--DNVERLDGFFDELARHGIARDSVPLIE-SDFSP--EGGY-AATCQLLESK------APFTGLFC--ANDTMA 201 (290)
T ss_dssp SCTTCH--HHHHHHHHHHHHHHTTTCCGGGSCEEE-CCSSH--HHHH-HHHHHHHHHT------CCCSEEEE--SSHHHH
T ss_pred CCCCCc--cHHHHHHHHHHHHHHcCCCCCcccEEe-cCCCh--hHHH-HHHHHHHhCC------CCCcEEEE--CCcHHH
Confidence 32 111 0112223334444443311 11222 11122 2233 2345555432 36999996 567788
Q ss_pred HHHHHHHhcCCC----CCeEEEEeeCC
Q 019410 261 AGLSLGSWLGTL----KAKVHAFSVCD 283 (341)
Q Consensus 261 aGl~~~~k~~~~----~~rVigVe~~g 283 (341)
.|+..++++.+. ++.|+|++-..
T Consensus 202 ~g~~~al~~~G~~vP~di~vvg~D~~~ 228 (290)
T 2rgy_A 202 VSALARFQQLGISVPGDVSVIGYDDDY 228 (290)
T ss_dssp HHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred HHHHHHHHHcCCCCCCceEEEEeCCch
Confidence 899999998763 57899987543
No 424
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=24.85 E-value=3.2e+02 Score=23.20 Aligned_cols=31 Identities=13% Similarity=0.047 Sum_probs=22.2
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
+++..|+ +|.-|.++|....+.|.+++++.+
T Consensus 16 ~vlITGa-sggiG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 16 TVLVTGG-TKGIGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 468999999988888987776654
No 425
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=24.84 E-value=88 Score=25.64 Aligned_cols=39 Identities=21% Similarity=0.407 Sum_probs=29.2
Q ss_pred HHcCCCeEEEeCCCcchHH-HHHHHHHHHcCCeEEEEEcCC
Q 019410 117 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 117 ~~~g~~~vVt~G~s~GNhg-~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
++.|.++||.+| ...|.| .+.|.-|..+|++++++.+..
T Consensus 97 ~~~gi~~lvv~G-~~T~~CV~~Ta~da~~~Gy~v~v~~Da~ 136 (167)
T 2a67_A 97 TEQAVQTLEIAG-VQTEFCVDTTIRMAHGLGYTCLMTPKTT 136 (167)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHHTCEEEECTTCE
T ss_pred HHCCCCEEEEEe-cccChHHHHHHHHHHHCCCEEEEechhh
Confidence 456899998776 445655 578888999999988876543
No 426
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=24.71 E-value=1.8e+02 Score=27.25 Aligned_cols=57 Identities=19% Similarity=0.227 Sum_probs=37.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHH----HHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLL----VERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~----~~~~~GAeV~~v~~ 185 (341)
+|.-.|-..+|.+++++.+++++|++++++-|..-. |. ..-+. ..+..|++|..+.+
T Consensus 157 ~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~-----p~-~~~~~~~~~~a~~~G~~v~~~~d 217 (333)
T 1duv_G 157 TLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACW-----PE-AALVTECRALAQQNGGNITLTED 217 (333)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGC-----CC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred EEEEECCCccchHHHHHHHHHHcCCEEEEECCcccC-----CC-HHHHHHHHHHHHHcCCeEEEEEC
Confidence 444455434699999999999999999999886541 10 11122 23368888877653
No 427
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=24.70 E-value=2.8e+02 Score=24.16 Aligned_cols=71 Identities=15% Similarity=0.070 Sum_probs=40.3
Q ss_pred HHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEE
Q 019410 171 LVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 250 (341)
Q Consensus 171 ~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~I 250 (341)
+.+...|++|+.+.+.. +..+++.+++.+.+....++..+-.++... ..+..++.++. +.+|.|
T Consensus 62 ~~L~~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v---~~~~~~~~~~~------~~id~l 125 (285)
T 2c07_A 62 KMLAKSVSHVICISRTQ-------KSCDSVVDEIKSFGYESSGYAGDVSKKEEI---SEVINKILTEH------KNVDIL 125 (285)
T ss_dssp HHHTTTSSEEEEEESSH-------HHHHHHHHHHHTTTCCEEEEECCTTCHHHH---HHHHHHHHHHC------SCCCEE
T ss_pred HHHHHcCCEEEEEcCCH-------HHHHHHHHHHHhcCCceeEEECCCCCHHHH---HHHHHHHHHhc------CCCCEE
Confidence 33444699998876532 112344445544343455565554555433 34455565554 369999
Q ss_pred EEcCCch
Q 019410 251 VVACGSG 257 (341)
Q Consensus 251 vv~vGtG 257 (341)
|..+|..
T Consensus 126 i~~Ag~~ 132 (285)
T 2c07_A 126 VNNAGIT 132 (285)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9999854
No 428
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=24.65 E-value=1.6e+02 Score=28.26 Aligned_cols=55 Identities=13% Similarity=-0.045 Sum_probs=35.0
Q ss_pred eEEEeCCCcchHHHHHHHHHHHc------C---------CeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYL------N---------LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~------G---------l~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
.++|.|||.+|+..-+++.-+.+ | =+.+|+++.... ....+.++..|++++.++-
T Consensus 142 gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H--------~s~~~~~~~~g~~~~~v~~ 211 (475)
T 3k40_A 142 GVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAH--------SSVERAGLLGGVKLRSVQS 211 (475)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSC--------HHHHHHHHHHTCEEEEECC
T ss_pred eEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCch--------HHHHHHHHHcCCceEEEEC
Confidence 67888888888765444322211 1 136778876542 2345667778999999974
No 429
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=24.57 E-value=3.5e+02 Score=23.48 Aligned_cols=33 Identities=21% Similarity=0.057 Sum_probs=22.4
Q ss_pred CCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 120 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 120 g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|...||| |+ +|.-|+++|..-.+.|.+++++-+
T Consensus 27 ~k~~lVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 27 DKVAFIT-GG-GSGIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp TCEEEEE-TT-TSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEe-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3344555 54 367888888888888887766644
No 430
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=24.52 E-value=2.5e+02 Score=24.85 Aligned_cols=28 Identities=7% Similarity=-0.047 Sum_probs=20.4
Q ss_pred EEcCCchhHHHHHHHHHhcC-CCCCeEEE
Q 019410 251 VVACGSGGTIAGLSLGSWLG-TLKAKVHA 278 (341)
Q Consensus 251 vv~vGtGGt~aGl~~~~k~~-~~~~rVig 278 (341)
++++++|.|..+++..+... .++++++-
T Consensus 60 viGla~G~T~~~~~~~l~~~~~~~v~~v~ 88 (266)
T 2gnp_A 60 KIGFSWGKSLSNLVDLIHSKSVRNVHFYP 88 (266)
T ss_dssp EEEECCSHHHHHHHHHCCCCCCSSCEEEE
T ss_pred EEEECChHHHHHHHHhccccCCCCCEEEE
Confidence 57889999999999988643 34555543
No 431
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.51 E-value=3.2e+02 Score=23.13 Aligned_cols=35 Identities=6% Similarity=-0.108 Sum_probs=27.2
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEee
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 281 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~ 281 (341)
.++|+||+ .+..++.|+..+++..+. ++.|+|++-
T Consensus 180 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vig~d~ 218 (276)
T 3jy6_A 180 DQKTVAFA--LKERWLLEFFPNLIISGLIDNQTVTATGFAD 218 (276)
T ss_dssp SSCEEEEE--SSHHHHHHHSHHHHHSSSCCSSSEEEEEBCC
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHHcCCCCCCcEEEEEECC
Confidence 46899987 567888899999998774 567888653
No 432
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.50 E-value=1.4e+02 Score=24.43 Aligned_cols=30 Identities=20% Similarity=0.102 Sum_probs=24.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
+|| | .+|.-|.+++......|.+++++.+.
T Consensus 4 lVt-G-atG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 4 GII-G-ATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEE-T-TTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEE-c-CCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 444 5 45899999999999999999988875
No 433
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=24.47 E-value=3.3e+02 Score=23.25 Aligned_cols=36 Identities=11% Similarity=0.047 Sum_probs=27.7
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEeeC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 282 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~~ 282 (341)
..+|+||+ .+...+.|+..+++..+. ++.|+|++-.
T Consensus 184 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 223 (290)
T 3clk_A 184 TDLTGIIA--ASDMTAIGILNQASSFGIEVPKDLSIVSIDGT 223 (290)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEeCCh
Confidence 46899997 456788899999988763 5778887643
No 434
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=24.46 E-value=75 Score=28.03 Aligned_cols=50 Identities=14% Similarity=0.019 Sum_probs=22.6
Q ss_pred CCCchHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 100 QLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 100 ~~ggnK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
.+|+..-=+ ..+.....++|.+.+++ + ........++......|.++..+
T Consensus 33 VTGas~GIG-~aia~~la~~G~~V~~~-~-r~~~~~~~~~~~~~~~~~~~~~~ 82 (270)
T 3ftp_A 33 VTGASRGIG-RAIALELARRGAMVIGT-A-TTEAGAEGIGAAFKQAGLEGRGA 82 (270)
T ss_dssp ETTCSSHHH-HHHHHHHHHTTCEEEEE-E-SSHHHHHHHHHHHHHHTCCCEEE
T ss_pred EECCCCHHH-HHHHHHHHHCCCEEEEE-e-CCHHHHHHHHHHHHhcCCcEEEE
Confidence 355553222 23344445677764444 2 22233444444444555554443
No 435
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=24.42 E-value=4e+02 Score=24.10 Aligned_cols=149 Identities=9% Similarity=0.006 Sum_probs=73.4
Q ss_pred HHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHH-HHcCCeEEEEEcCCCCCcCCCC---------Ccchh--HHHHHhCC
Q 019410 110 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAA-KYLNLDCYLILRTSKVLVDQDP---------GLIGN--LLVERLVG 177 (341)
Q Consensus 110 ~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa-~~~Gl~~~ivvp~~~~~~~~~~---------~~~gn--~~~~~~~G 177 (341)
..+.+++.+.|.+.|| |...++...+++-.+ ...+++.+.. ...+.....+ ...+. .+.+...|
T Consensus 46 ~~~~~~l~~~~v~~Ii--Gp~~s~~~~a~~~~~~~~~~vp~i~~--~~~~~~~~~~~~~~f~~~~~~~~~~~a~~a~~~g 121 (325)
T 2h4a_A 46 QDIIAQAKQAGIKTLV--GPLLKQNLDVILADPAQIQGMDVLAL--NATPNSRAIPQLCYYGLSPEDEAESAANKMWNDG 121 (325)
T ss_dssp HHHHHHHHHTTCCEEE--CCCSHHHHHHHHHCGGGGTTCEEEES--CCCSSCCCCTTEEECCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEE--eeCCHHHHHHHHhhhhccCCCcEEEC--CCCccccCCCCeEEEECCHHHHHHHHHHHHHHcC
Confidence 3445556677888776 666667777777766 5678886543 2221110000 00011 12233346
Q ss_pred CE--EEEECCccccccCcHHHHHHHHHHHHHhCCCcE---EeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEE
Q 019410 178 AH--IELISKEEYSKIGSVTLTNILKEKLLKEGRRPY---VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 252 (341)
Q Consensus 178 Ae--V~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~---~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv 252 (341)
.+ .++.+...|.. ...+...+.+++.|.... ..+.+ . -+. ..+.++. ..+|.||+
T Consensus 122 ~k~vail~~~~~yG~----~~~~~F~~~~~~~Gg~vv~~~~y~~~-~------d~~----~~l~~i~-----~~pDaV~~ 181 (325)
T 2h4a_A 122 VRNPLVAMPQNDLGQ----RVGNAFNVRWQQLAGTDANIRYYNLP-A------DVT----YFVQENN-----SNTTALYA 181 (325)
T ss_dssp CCSCEEEEESSHHHH----HHHHHHHHHHHHHHSSCCEEEEESST-T------HHH----HHHHHST-----TCCCEEEE
T ss_pred CCeEEEEEcCCcHHH----HHHHHHHHHHHHcCCCcceeEecCCH-H------HHH----HHHHhcC-----CCCCEEEE
Confidence 54 33344444532 122333444444432221 11111 1 111 1112222 36999999
Q ss_pred cCCchhHHHHHHHHHhcCCCCCeEEEEeeCC
Q 019410 253 ACGSGGTIAGLSLGSWLGTLKAKVHAFSVCD 283 (341)
Q Consensus 253 ~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g 283 (341)
+ |.+.-+.-+...++..+.+++|++..-..
T Consensus 182 ~-~~~~~~~~i~~~~~~~g~~~pl~~~~~~~ 211 (325)
T 2h4a_A 182 V-ASPTELAEXKGYLTNIVPNLAIYASSRAS 211 (325)
T ss_dssp C-CCHHHHHHHHHHHTTTCTTCEEEECGGGC
T ss_pred e-CCHHHHhhhhhhHhhcCCCCCEEEecccc
Confidence 7 45555555556667678899999855443
No 436
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=24.40 E-value=80 Score=29.25 Aligned_cols=56 Identities=16% Similarity=0.093 Sum_probs=36.4
Q ss_pred eEEEeCCC-cchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 123 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 123 ~vVt~G~s-~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
+|.-.|-. .||.+++++.+++++|++++++-|..-. |. ..-+..++..|+++..+.
T Consensus 157 ~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~-----~~-~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 157 KIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLR-----MP-RHIVEELREKGMKVVETT 213 (308)
T ss_dssp EEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGC-----CC-HHHHHHHHHTTCCEEEES
T ss_pred EEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCcccc-----CC-HHHHHHHHHcCCeEEEEc
Confidence 34444533 4799999999999999999999886541 10 112344556677765554
No 437
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=24.35 E-value=3.9e+02 Score=23.96 Aligned_cols=115 Identities=12% Similarity=-0.014 Sum_probs=0.0
Q ss_pred CCchHhHHHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEE
Q 019410 101 LSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 180 (341)
Q Consensus 101 ~ggnK~Rkl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV 180 (341)
...+-.+....++....-...++++.+|. |..|..+|......|. +++++.+.. ++. ++..|..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~viI~G~--G~~g~~l~~~L~~~g~--v~vid~~~~----------~~~-~~~~~~~~ 159 (336)
T 1lnq_A 95 LEFLINREQMKLMGLIDVAKSRHVVICGW--SESTLECLRELRGSEV--FVLAEDENV----------RKK-VLRSGANF 159 (336)
T ss_dssp TTTC-----------------CEEEEESC--CHHHHHHHTTGGGSCE--EEEESCGGG----------HHH-HHHTTCEE
T ss_pred HHHHHHHHHHHHHhhhhhcccCCEEEECC--cHHHHHHHHHHHhCCc--EEEEeCChh----------hhh-HHhCCcEE
Q ss_pred EEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHH
Q 019410 181 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 260 (341)
Q Consensus 181 ~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~ 260 (341)
+.-+..+ .|.+++.+- .+.|.++++.+.--.-
T Consensus 160 i~gd~~~--------------------------------------------~~~L~~a~i----~~a~~vi~~~~~d~~n 191 (336)
T 1lnq_A 160 VHGDPTR--------------------------------------------VSDLEKANV----RGARAVIVDLESDSET 191 (336)
T ss_dssp EESCTTS--------------------------------------------HHHHHHTCS----TTEEEEEECCSSHHHH
T ss_pred EEeCCCC--------------------------------------------HHHHHhcCh----hhccEEEEcCCccHHH
Q ss_pred HHHHHHHhcCCCCCeEEE
Q 019410 261 AGLSLGSWLGTLKAKVHA 278 (341)
Q Consensus 261 aGl~~~~k~~~~~~rVig 278 (341)
.=++...+..+++.+|++
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
No 438
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=24.35 E-value=39 Score=33.99 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=25.7
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcC-CCCCeEEEEeeCCC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDD 284 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~-~~~~rVigVe~~g~ 284 (341)
..+|+|||..|++|.. .+.++. .++.+|.-+|..+.
T Consensus 5 ~~yDyIVVGgG~AG~v----~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNT----VAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHH----HHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHH----HHHHHHhCCCCcEEEEecCCC
Confidence 4689999988877665 344432 36689999998765
No 439
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=24.34 E-value=3.8e+02 Score=23.87 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=73.3
Q ss_pred HHHHHH-cCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCC--C-------CCc----chhHHHHHhCCC
Q 019410 113 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--D-------PGL----IGNLLVERLVGA 178 (341)
Q Consensus 113 l~~A~~-~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~--~-------~~~----~gn~~~~~~~GA 178 (341)
+.+... .+.+.|| |...+....+++-.+...+++.+............ . +.. ..-...+..+|.
T Consensus 63 ~~~li~~~~v~~ii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 140 (375)
T 3i09_A 63 AREWMDRGGLDLLV--GGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGG 140 (375)
T ss_dssp HHHHHHHSCEEEEE--ECSCHHHHHHHHHHHHHHTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCCCEEEE--CCCCcHHHHHHHHHHHHcCceEEEeCCCchhhhcccCCCcEEEeeCChHHHHHHHHHHHHHcCC
Confidence 344444 5666666 45556788888999999999887663221111000 0 000 011234444565
Q ss_pred E-EEEEC-CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEc
Q 019410 179 H-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 253 (341)
Q Consensus 179 e-V~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~ 253 (341)
+ |.++. +..|. ....+.+.+.+++.|... ..++.+..+. .....+ +.. ..+|.||++
T Consensus 141 ~~vaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~l~~----i~~----~~~d~v~~~ 202 (375)
T 3i09_A 141 KTWFFLTADYAFG----KALEKNTADVVKANGGKVLGEVRHPLSASDF------SSFLLQ----AQS----SKAQILGLA 202 (375)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCSCC------HHHHHH----HHH----TCCSEEEEE
T ss_pred ceEEEEecccHHH----HHHHHHHHHHHHHcCCEEeeeeeCCCCCccH------HHHHHH----HHh----CCCCEEEEe
Confidence 4 54443 22221 123344445555544221 1233332221 112223 322 358998875
Q ss_pred CCchhHHHHHHHHHhcCCCCCe--EEE
Q 019410 254 CGSGGTIAGLSLGSWLGTLKAK--VHA 278 (341)
Q Consensus 254 vGtGGt~aGl~~~~k~~~~~~r--Vig 278 (341)
+.+..+.++...++..+...+ |++
T Consensus 203 -~~~~~~~~~~~~~~~~g~~~~~~i~g 228 (375)
T 3i09_A 203 -NAGGDTVNAIKAAKEFGITKTMKLAA 228 (375)
T ss_dssp -CCHHHHHHHHHHHHHTTGGGTCEEEE
T ss_pred -cCchhHHHHHHHHHHcCCCcCceEEe
Confidence 556677888888888776554 554
No 440
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=24.25 E-value=3.3e+02 Score=23.18 Aligned_cols=29 Identities=14% Similarity=0.094 Sum_probs=18.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcC--CeEEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLN--LDCYLIL 153 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~G--l~~~ivv 153 (341)
.||| |+ ++--|.++|..-.+.| ..++++-
T Consensus 5 ~lVT-Ga-s~GIG~aia~~l~~~g~~~~v~~~~ 35 (254)
T 3kzv_A 5 ILVT-GV-SRGIGKSIVDVLFSLDKDTVVYGVA 35 (254)
T ss_dssp EEEC-ST-TSHHHHHHHHHHHHHCSSCEEEEEE
T ss_pred EEEE-CC-CchHHHHHHHHHHhcCCCeEEEEec
Confidence 3454 54 3678888888777776 4444443
No 441
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.12 E-value=1.4e+02 Score=26.59 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=27.1
Q ss_pred CCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccc
Q 019410 246 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYF 288 (341)
Q Consensus 246 ~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~ 288 (341)
.+|. |+.+|+=||+.-++..+....+++.|+||. .|...++
T Consensus 35 ~~D~-vv~lGGDGT~l~aa~~~~~~~~~~PilGIn-~G~lgfl 75 (272)
T 2i2c_A 35 EPEI-VISIGGDGTFLSAFHQYEERLDEIAFIGIH-TGHLGFY 75 (272)
T ss_dssp SCSE-EEEEESHHHHHHHHHHTGGGTTTCEEEEEE-SSSCCSS
T ss_pred CCCE-EEEEcCcHHHHHHHHHHhhcCCCCCEEEEe-CCCCCcC
Confidence 3555 555788888877777765433478999994 5554444
No 442
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.95 E-value=90 Score=27.45 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 108 KLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 108 kl~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
-++..+.++.++|++.|| |+ .-+.-.|+++|++++++.
T Consensus 142 e~~~~i~~l~~~G~~vVV--G~------~~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 142 DARGQINELKANGTEAVV--GA------GLITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHHTTCCEEE--ES------HHHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHHCCCCEEE--CC------HHHHHHHHHcCCcEEEEC
Confidence 356678888888888877 32 234667788888888775
No 443
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=23.91 E-value=3.4e+02 Score=23.11 Aligned_cols=50 Identities=16% Similarity=0.064 Sum_probs=33.0
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEECC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 185 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~~ 185 (341)
...||| |++ |--|+++|..-.+.|.+++++-+.. ....+.+|.++..+.-
T Consensus 10 k~vlVT-Gas-~gIG~aia~~l~~~G~~V~~~~r~~-------------~~~~~~~~~~~~~~~~ 59 (257)
T 3tl3_A 10 AVAVVT-GGA-SGLGLATTKRLLDAGAQVVVLDIRG-------------EDVVADLGDRARFAAA 59 (257)
T ss_dssp CEEEEE-TTT-SHHHHHHHHHHHHHTCEEEEEESSC-------------HHHHHHTCTTEEEEEC
T ss_pred CEEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEeCch-------------HHHHHhcCCceEEEEC
Confidence 334555 544 6889999999999999988775521 2234456776666643
No 444
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=23.90 E-value=74 Score=28.28 Aligned_cols=28 Identities=25% Similarity=0.064 Sum_probs=22.6
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
|+..|| |=.|.++|+..++.|++++|+=
T Consensus 5 V~IIGa--G~~Gl~~A~~L~~~G~~V~vlE 32 (336)
T 1yvv_A 5 IAIIGT--GIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECC--cHHHHHHHHHHHHCCCcEEEEE
Confidence 333565 7899999999999999988773
No 445
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=23.87 E-value=1.1e+02 Score=30.31 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=24.8
Q ss_pred cCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 119 QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 119 ~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
...+.|| .|| |-.|.++|+.+++.|++++++
T Consensus 31 ~~~DVvV-IGg--Gi~G~~~A~~La~rG~~V~Ll 61 (571)
T 2rgh_A 31 EELDLLI-IGG--GITGAGVAVQAAASGIKTGLI 61 (571)
T ss_dssp SCBSEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEE-ECc--CHHHHHHHHHHHHCCCcEEEE
Confidence 3456665 465 789999999999999997777
No 446
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=23.76 E-value=86 Score=29.88 Aligned_cols=31 Identities=16% Similarity=0.185 Sum_probs=24.8
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
++|...|+ |-.|+.++.+|+++|++++++-+
T Consensus 36 ~~IlIlG~--G~lg~~~~~aa~~lG~~v~v~d~ 66 (419)
T 4e4t_A 36 AWLGMVGG--GQLGRMFCFAAQSMGYRVAVLDP 66 (419)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEECC
Confidence 45555675 67899999999999999887743
No 447
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=23.71 E-value=3.3e+02 Score=23.24 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=40.7
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. +..++..+++ +....+++.+-.++... ..+..++.++. +.+|.
T Consensus 25 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~---~~~~~~~~~D~~~~~~v---~~~~~~~~~~~------g~id~ 85 (259)
T 4e6p_A 25 AEAYVREGATVAIADIDI-------ERARQAAAEI---GPAAYAVQMDVTRQDSI---DAAIAATVEHA------GGLDI 85 (259)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHH---CTTEEEEECCTTCHHHH---HHHHHHHHHHS------SSCCE
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHh---CCCceEEEeeCCCHHHH---HHHHHHHHHHc------CCCCE
Confidence 344556799999987632 1223333333 33456666555555443 34556666665 36999
Q ss_pred EEEcCCc
Q 019410 250 IVVACGS 256 (341)
Q Consensus 250 Ivv~vGt 256 (341)
||..+|.
T Consensus 86 lv~~Ag~ 92 (259)
T 4e6p_A 86 LVNNAAL 92 (259)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999985
No 448
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=23.62 E-value=1.8e+02 Score=27.24 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=27.5
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
+|.-.|-..+|.+++++.+++++|++++++-|..-
T Consensus 157 ~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (335)
T 1dxh_A 157 SYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKAL 191 (335)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred EEEEecCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 44445543469999999999999999999988654
No 449
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=23.62 E-value=1.9e+02 Score=27.82 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=36.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCe-EEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLD-CYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 182 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~-~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~ 182 (341)
+.|+..|| ||.|.-+|..+.++|.+ ++++.+...... |.....+..++..|.++++
T Consensus 265 k~VvVIGg--G~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~---p~~~~e~~~~~~~Gv~~~~ 321 (456)
T 2vdc_G 265 KHVVVLGG--GDTAMDCVRTAIRQGATSVKCLYRRDRKNM---PGSQREVAHAEEEGVEFIW 321 (456)
T ss_dssp SEEEEECS--SHHHHHHHHHHHHTTCSEEEEECSSCSTTC---SSCHHHHHHHHHTTCEEEC
T ss_pred CEEEEECC--ChhHHHHHHHHHHcCCCEEEEEEeCCccCC---CCCHHHHHHHHHCCCEEEe
Confidence 45666776 89999999999999985 777766442100 1112234556667877654
No 450
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=23.58 E-value=3.6e+02 Score=23.32 Aligned_cols=11 Identities=9% Similarity=-0.046 Sum_probs=8.5
Q ss_pred CCCeEEEEeeC
Q 019410 272 LKAKVHAFSVC 282 (341)
Q Consensus 272 ~~~rVigVe~~ 282 (341)
..++|..|.+.
T Consensus 185 ~gI~vn~v~PG 195 (274)
T 3e03_A 185 QGVAINALWPR 195 (274)
T ss_dssp GTCEEEEEECS
T ss_pred cCEEEEEEECC
Confidence 35899998875
No 451
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=23.46 E-value=25 Score=36.68 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=21.9
Q ss_pred EEEEcCCchhHHHHHHHHHhcCC---------CCCeEEEEeeCC
Q 019410 249 DIVVACGSGGTIAGLSLGSWLGT---------LKAKVHAFSVCD 283 (341)
Q Consensus 249 ~Ivv~vGtGGt~aGl~~~~k~~~---------~~~rVigVe~~g 283 (341)
.+++++|+|-+.+-+..+.+..+ .+.+|+|||...
T Consensus 413 VldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 413 IYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp EEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred EEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 56677777777544444443222 456999999854
No 452
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=23.44 E-value=3.5e+02 Score=23.08 Aligned_cols=31 Identities=29% Similarity=0.140 Sum_probs=23.9
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
.+|| |+ +|--|+++|....+.|.+++++-+.
T Consensus 8 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 8 VIIT-GG-ARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555 54 4789999999999999998777553
No 453
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.42 E-value=77 Score=28.07 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=22.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
|.+| .|| |-.|...|..++++|+++++|
T Consensus 8 DVvI-IGa--GpAGlsAA~~lar~g~~v~li 35 (304)
T 4fk1_A 8 DCAV-IGA--GPAGLNASLVLGRARKQIALF 35 (304)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 4444 465 678889999999999998887
No 454
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.33 E-value=3.7e+02 Score=23.39 Aligned_cols=32 Identities=28% Similarity=0.198 Sum_probs=24.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..||| |+ +|--|.++|..-.+.|.+++++-+.
T Consensus 29 ~vlVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 29 VCIVT-GG-GSGIGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 4688999999999999988777543
No 455
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=23.33 E-value=80 Score=28.69 Aligned_cols=29 Identities=24% Similarity=0.118 Sum_probs=23.4
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |=.|.++|+..++.|++++|+=.
T Consensus 20 vvIIGg--G~~Gl~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 20 AVVIGG--GIIGSAIAYYLAKENKNTALFES 48 (382)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECc--CHHHHHHHHHHHhCCCcEEEEeC
Confidence 444565 78999999999999999887744
No 456
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.26 E-value=1.3e+02 Score=26.40 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=24.1
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
..+|| |+ +|--|.++|......|.+++++.+.
T Consensus 30 ~vlIT-Ga-sggIG~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 30 KVIVT-GA-SKGIGREMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp EEEES-SC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 34444 54 4789999999999999997777654
No 457
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=23.25 E-value=82 Score=28.88 Aligned_cols=30 Identities=27% Similarity=0.130 Sum_probs=24.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.|+..|| |-.|.++|...++.|++++|+=.
T Consensus 13 dVvIVGa--G~aGl~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 13 RAEVAGG--GFAGLTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECS
T ss_pred eEEEECC--CHHHHHHHHHHHHCCCCEEEEec
Confidence 3554566 78999999999999999888744
No 458
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=23.21 E-value=3.4e+02 Score=22.98 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=41.9
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+.+..- +..+.+.+++.+.+.+..+++.+-.++... ..+..++.+++. .+|.
T Consensus 38 a~~l~~~G~~v~~~~r~~~------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~---~~~~~~~~~~~~------~~d~ 102 (274)
T 1ja9_A 38 AIELGRRGASVVVNYGSSS------KAAEEVVAELKKLGAQGVAIQADISKPSEV---VALFDKAVSHFG------GLDF 102 (274)
T ss_dssp HHHHHHTTCEEEEEESSCH------HHHHHHHHHHHHTTCCEEEEECCTTSHHHH---HHHHHHHHHHHS------CEEE
T ss_pred HHHHHHCCCEEEEEcCCch------HHHHHHHHHHHhcCCcEEEEEecCCCHHHH---HHHHHHHHHHcC------CCCE
Confidence 3444557999988865211 122344455554444455565554555433 344556666653 5899
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
||..+|..
T Consensus 103 vi~~Ag~~ 110 (274)
T 1ja9_A 103 VMSNSGME 110 (274)
T ss_dssp EECCCCCC
T ss_pred EEECCCCC
Confidence 99988854
No 459
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=23.14 E-value=2.6e+02 Score=23.75 Aligned_cols=73 Identities=11% Similarity=-0.033 Sum_probs=41.7
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+....... .+...+++.+.+.+..++..+-.++.. ...+..++.+++ +.+|.
T Consensus 30 a~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~---v~~~~~~~~~~~------g~id~ 94 (256)
T 3ezl_A 30 CQRLHKDGFRVVAGCGPNSPR------RVKWLEDQKALGFDFYASEGNVGDWDS---TKQAFDKVKAEV------GEIDV 94 (256)
T ss_dssp HHHHHHTTEEEEEEECTTCSS------HHHHHHHHHHTTCCCEEEECCTTCHHH---HHHHHHHHHHHT------CCEEE
T ss_pred HHHHHHCCCEEEEEeCCCHHH------HHHHHHHHHhcCCeeEEEecCCCCHHH---HHHHHHHHHHhc------CCCCE
Confidence 344455799998876322111 122334444444456666655455543 334556666665 36999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
||..+|..
T Consensus 95 lv~~Ag~~ 102 (256)
T 3ezl_A 95 LVNNAGIT 102 (256)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999864
No 460
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=23.02 E-value=83 Score=29.14 Aligned_cols=29 Identities=34% Similarity=0.352 Sum_probs=23.3
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |=.|.++|+..++.|++++|+=.
T Consensus 26 V~IVGa--G~aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 26 AIVIGA--GIGGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeC
Confidence 444565 78999999999999999888743
No 461
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=23.00 E-value=2e+02 Score=26.45 Aligned_cols=35 Identities=6% Similarity=-0.010 Sum_probs=27.1
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
+|.-.|-..+|.+++++.+++++|++++++-|..-
T Consensus 150 ~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~ 184 (307)
T 2i6u_A 150 RLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGF 184 (307)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 44445543369999999999999999999988654
No 462
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=22.95 E-value=1.6e+02 Score=24.53 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCC--CCccchHhHHHHhhcccCCCCCC
Q 019410 229 EAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCD--DPDYFYDYTQGLLDGLNAGVDSR 306 (341)
Q Consensus 229 t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g--~~~~~~~~i~~l~~~~~~~~~~~ 306 (341)
.++.+|.+... ..+..+|+++-.||...+-..+-. ++.+..+--+.+.. ........+ .+...+...+.-.
T Consensus 20 ~La~~I~~~~~-----~~~~~vvVgi~~gG~~~a~~la~~-L~~~~~~~~i~~~~y~~~~~~~~~v-~i~~~~~~~~~gk 92 (177)
T 3ohp_A 20 ELGQQITEHYQ-----GSSDLVLVGLLRGSFVFMADLARQ-IHLTHQVDFMTASSYGNSMQSSRDV-RILKDLDDDIKGK 92 (177)
T ss_dssp HHHHHHHHHTT-----TCSCEEEEEETTTTHHHHHHHHHT-CCSCCEEEEEEECC--------CCC-CEEECCSSCCTTS
T ss_pred HHHHHHHHHcC-----CCCCeEEEEECcchHHHHHHHHHH-cCCCceEEEEEEEEEcCCCccCCcE-EEecCCCcccCCC
Confidence 45555554432 223257777777777654443333 33344443333321 110000000 0112222344556
Q ss_pred ceEEeccc-hHHHHHHHHHHHHHhcC
Q 019410 307 DIVNIQNV-SVYMTFKNILMNILMNG 331 (341)
Q Consensus 307 ~iv~v~d~-~~~~~~~~~~~~~~~~~ 331 (341)
+++.|+|. ..-.|++.++..+...|
T Consensus 93 ~vliVDDii~TG~Tl~~~~~~l~~~g 118 (177)
T 3ohp_A 93 DVLLVEDIIDTGNTLNKVKEILALRE 118 (177)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHTTC
T ss_pred EEEEEeeEeCcHHHHHHHHHHHHhcC
Confidence 78888888 55567776666655554
No 463
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=22.93 E-value=1.9e+02 Score=28.11 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=47.5
Q ss_pred HHHHHHHhcCCCCCCC-CEEEEcCCchhHHHHHHHHHhcCCCCCeEEEEeeCCCCccchHhHHHHhhcccCCCCCCceEE
Q 019410 232 KEIEQQLQTGTGGVKF-DDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVN 310 (341)
Q Consensus 232 ~EI~~Ql~~~~~g~~~-D~Ivv~vGtGGt~aGl~~~~k~~~~~~rVigVe~~g~~~~~~~~i~~l~~~~~~~~~~~~iv~ 310 (341)
.|+.++... ... ++||+.+|.-+.+.|+..++- ...||||.+. ....+...+.++++ +..++. +.+
T Consensus 310 ~~~~~~~~~----~g~~~viIa~AG~~a~Lpgvva~~t----~~PVIgvP~~-~~~~G~daLls~vq-mp~g~p---vat 376 (425)
T 2h31_A 310 LRIKAEYEG----DGIPTVFVAVAGRSNGLGPVMSGNT----AYPVISCPPL-TPDWGVQDVWSSLR-LPSGLG---CST 376 (425)
T ss_dssp HHHHHHHHT----TCCCEEEEEECCSSCCHHHHHHHHC----SSCEEECCCC-CTTTHHHHGGGTSS-CCSSCC---CEE
T ss_pred HHHHHHHHH----CCCCeEEEEEcCcccchHhHHhccC----CCCEEEeeCc-cccccHHHHHHHhc-CCCCCc---eEE
Confidence 455555542 225 689999999899999998874 4689999985 22233333333333 223343 445
Q ss_pred eccchHHHHHHHHHHHHH
Q 019410 311 IQNVSVYMTFKNILMNIL 328 (341)
Q Consensus 311 v~d~~~~~~~~~~~~~~~ 328 (341)
|..+. ..-.+|..||
T Consensus 377 v~~~~---nAa~~A~~Il 391 (425)
T 2h31_A 377 VLSPE---GSAQFAAQIF 391 (425)
T ss_dssp CCCHH---HHHHHHHHHH
T ss_pred ecCch---HHHHHHHHHH
Confidence 55443 3444555555
No 464
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=22.91 E-value=77 Score=29.95 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=25.0
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 153 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivv 153 (341)
++|...|| |-.|+.++.+|+++|++++++-
T Consensus 25 ~~I~ilGg--G~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 25 RKVGVLGG--GQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEE
Confidence 45665665 6799999999999999998886
No 465
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=22.84 E-value=1.8e+02 Score=27.07 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=27.0
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
+|.-.|-..+|.+++++.+++++|++++++-|..-
T Consensus 169 ~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 203 (325)
T 1vlv_A 169 KVVFMGDTRNNVATSLMIACAKMGMNFVACGPEEL 203 (325)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 44445543469999999999999999999988653
No 466
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=22.83 E-value=1.2e+02 Score=26.00 Aligned_cols=160 Identities=19% Similarity=0.089 Sum_probs=76.4
Q ss_pred HHHHHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCC-----cCCCCCcchh---HHHHHhCC--C
Q 019410 109 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLVG--A 178 (341)
Q Consensus 109 l~~ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~-----~~~~~~~~gn---~~~~~~~G--A 178 (341)
....+.....++.+.||..+.. .+........+...|++++++-...... ...+....+. ..+.+.+| -
T Consensus 54 ~~~~~~~l~~~~vdgii~~~~~-~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~L~~~~G~~~ 132 (289)
T 3brs_A 54 QNELIEEAIKRKPDVILLAAAD-YEKTYDAAKEIKDAGIKLIVIDSGMKQDIADITVATDNIQAGIRIGAVTKNLVRKSG 132 (289)
T ss_dssp HHHHHHHHHHTCCSEEEECCSC-TTTTHHHHTTTGGGTCEEEEESSCCSSCCCSEEEECCHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHhCCCEEEEeCCC-hHHhHHHHHHHHHCCCcEEEECCCCCCCcceEEEeeChHHHHHHHHHHHHHHcCCCc
Confidence 3445666677889998875432 2221222333455799887764321110 0000000111 12233345 4
Q ss_pred EEEEECCc-cccccCcHHHHHHHHHHHHHhCCCcEE-eCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 019410 179 HIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYV-IPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGS 256 (341)
Q Consensus 179 eV~~v~~~-~~~~~~~~~~~~~~a~~l~~~g~~~~~-ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGt 256 (341)
+|.++... ... ....+.+...+.+++.+ ..+. +-.+..+. ..++ ....+++++- .++|+||+ .+
T Consensus 133 ~i~~i~~~~~~~--~~~~R~~gf~~~l~~~g-~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~--~~ 198 (289)
T 3brs_A 133 KIGVISFVKNSK--TAMDREEGLKIGLSDDS-NKIEAIYYCDSNY--DKAY-DGTVELLTKY------PDISVMVG--LN 198 (289)
T ss_dssp EEEEEESCTTSH--HHHHHHHHHHHHHGGGG-GGEEEEEECTTCH--HHHH-HHHHHHHHHC------TTEEEEEE--SS
T ss_pred eEEEEECCCCCc--cHHHHHHHHHHHHHhCC-CcEEeeecCCCCH--HHHH-HHHHHHHHhC------CCceEEEE--CC
Confidence 67666432 111 01122233334444433 2211 10111111 1233 2344554431 35888886 45
Q ss_pred hhHHHHHHHHHhcCCC--CCeEEEEeeCC
Q 019410 257 GGTIAGLSLGSWLGTL--KAKVHAFSVCD 283 (341)
Q Consensus 257 GGt~aGl~~~~k~~~~--~~rVigVe~~g 283 (341)
...+.|+..++++.+. ++.|+|++-..
T Consensus 199 d~~a~g~~~al~~~G~~~di~vvg~d~~~ 227 (289)
T 3brs_A 199 QYSATGAARAIKDMSLEAKVKLVCIDSSM 227 (289)
T ss_dssp HHHHHHHHHHHHHTTCTTTSEEEEEESCS
T ss_pred CcchHHHHHHHHhcCCCCCEEEEEECCCH
Confidence 6788899999988775 58899887543
No 467
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=22.70 E-value=1.3e+02 Score=29.83 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=39.2
Q ss_pred HhHHHHHHHHHHHHcCCC----eEEEeCCCcc--hHHHHHHHHHHHcCCe---EEEEEcCCC
Q 019410 105 KVRKLEFLMADAVAQGAD----CIITIGGIQS--NHCRAAAVAAKYLNLD---CYLILRTSK 157 (341)
Q Consensus 105 K~Rkl~~ll~~A~~~g~~----~vVt~G~s~G--Nhg~AlA~aa~~~Gl~---~~ivvp~~~ 157 (341)
+--.+..+++.+++.|.. .+++-||..| +|..+|.-.|++.|++ +|++++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~H~~gl~sdggvhsh~~hl~~l~~~a~~~g~~~v~~H~~~dGrD 154 (511)
T 1o98_A 93 RNETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRD 154 (511)
T ss_dssp GCHHHHHHHHHHHHHTCCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCCEEEEEEECSSS
T ss_pred cCHHHHHHHHHHHhcCCeEEEEEeccCCCCccHHHHHHHHHHHHHHCCCCeEEEEEEccCCC
Confidence 344567778888775532 4556677666 9999999999999995 578887653
No 468
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=22.66 E-value=3.5e+02 Score=22.91 Aligned_cols=12 Identities=8% Similarity=-0.067 Sum_probs=8.3
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 185 ~gi~v~~v~Pg~ 196 (266)
T 1xq1_A 185 DGIRANAVAPAV 196 (266)
T ss_dssp GTCEEEEEECCS
T ss_pred hCcEEEEEeeCC
Confidence 368888887643
No 469
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=22.64 E-value=2.9e+02 Score=23.15 Aligned_cols=70 Identities=10% Similarity=-0.001 Sum_probs=0.0
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHH-HHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKL-LKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD 248 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l-~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D 248 (341)
.+.+...|++|+.+.+.. ...+++.+++ .+.+.+..++..+-.++.. ...+..++.++++ .+|
T Consensus 19 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~------~id 82 (250)
T 2cfc_A 19 ATRFLARGDRVAALDLSA-------ETLEETARTHWHAYADKVLRVRADVADEGD---VNAAIAATMEQFG------AID 82 (250)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHHSTTTGGGEEEEECCTTCHHH---HHHHHHHHHHHHS------CCC
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHHHHhcCCcEEEEEecCCCHHH---HHHHHHHHHHHhC------CCC
Q ss_pred EEEEcCC
Q 019410 249 DIVVACG 255 (341)
Q Consensus 249 ~Ivv~vG 255 (341)
.||..+|
T Consensus 83 ~li~~Ag 89 (250)
T 2cfc_A 83 VLVNNAG 89 (250)
T ss_dssp EEEECCC
T ss_pred EEEECCC
No 470
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=22.61 E-value=3.6e+02 Score=23.44 Aligned_cols=70 Identities=13% Similarity=0.064 Sum_probs=40.2
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. ..++.++++.+.+....+++.+-.++.... .+ .+..++. +.+|.
T Consensus 48 a~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~---~~-~~~~~~~------g~iD~ 109 (273)
T 3uf0_A 48 AHGYARAGAHVLAWGRTD--------GVKEVADEIADGGGSAEAVVADLADLEGAA---NV-AEELAAT------RRVDV 109 (273)
T ss_dssp HHHHHHTTCEEEEEESST--------HHHHHHHHHHTTTCEEEEEECCTTCHHHHH---HH-HHHHHHH------SCCCE
T ss_pred HHHHHHCCCEEEEEcCHH--------HHHHHHHHHHhcCCcEEEEEecCCCHHHHH---HH-HHHHHhc------CCCcE
Confidence 444556799999887431 123345555554444555655555554432 33 3444444 36999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
+|..+|..
T Consensus 110 lv~nAg~~ 117 (273)
T 3uf0_A 110 LVNNAGII 117 (273)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999864
No 471
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=22.60 E-value=74 Score=30.94 Aligned_cols=28 Identities=21% Similarity=0.264 Sum_probs=22.6
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
|.|| .|| |-.|.+.|+.+++.|.+++|+
T Consensus 43 DVvV-VGa--G~AGl~AA~~aa~~G~~V~vl 70 (510)
T 4at0_A 43 DVVV-AGY--GIAGVAASIEAARAGADVLVL 70 (510)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCcEEEE
Confidence 4444 565 899999999999999997666
No 472
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.58 E-value=1.4e+02 Score=26.04 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=25.2
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCC
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 156 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~ 156 (341)
+.+|| | .+|+-|.+++......|.+++++.+..
T Consensus 4 ~vlVt-G-atG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 4 KILIL-G-PTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CEEEE-S-TTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred EEEEE-C-CCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 33454 5 458999999999888899988887754
No 473
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=22.57 E-value=2.8e+02 Score=26.02 Aligned_cols=77 Identities=19% Similarity=0.304 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHh------CCCc--EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCC--CCCCEEEEcCCchhH--HHHH
Q 019410 196 LTNILKEKLLKE------GRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGG--VKFDDIVVACGSGGT--IAGL 263 (341)
Q Consensus 196 ~~~~~a~~l~~~------g~~~--~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g--~~~D~Ivv~vGtGGt--~aGl 263 (341)
+.+++.+.+.+. +-.. +.+|.+-.|+.- ....++.+++.+ .+ ..=+.+|+++|+|.. ++|.
T Consensus 51 ~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~-----~~v~~~~~~~~~--~~~~~~r~d~iIalGGGsv~D~ak~ 123 (393)
T 1sg6_A 51 YTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSR-----QTKADIEDWMLS--QNPPCGRDTVVIALGGGVIGDLTGF 123 (393)
T ss_dssp HHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSH-----HHHHHHHHHHHT--SSSCCCTTCEEEEEESHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCH-----HHHHHHHHHHHH--cCCCCCCCCEEEEECCcHHHHHHHH
Q ss_pred HHHHhcCCCCCeEEEEee
Q 019410 264 SLGSWLGTLKAKVHAFSV 281 (341)
Q Consensus 264 ~~~~k~~~~~~rVigVe~ 281 (341)
+.+... +.+++|.|..
T Consensus 124 ~Aa~~~--rgip~i~IPT 139 (393)
T 1sg6_A 124 VASTYM--RGVRYVQVPT 139 (393)
T ss_dssp HHHHGG--GCCEEEEEEC
T ss_pred HHHHhc--CCCCEEEECC
No 474
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=22.56 E-value=93 Score=28.78 Aligned_cols=27 Identities=11% Similarity=0.053 Sum_probs=22.7
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
||..|| |-.|.+.|+..++.|.+++|+
T Consensus 3 VvVIGa--GiaGLsaA~~La~~G~~V~vl 29 (425)
T 3ka7_A 3 TVVIGA--GLGGLLSAARLSKAGHEVEVF 29 (425)
T ss_dssp EEEECC--BHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECC--CHHHHHHHHHHHhCCCceEEE
Confidence 444576 889999999999999998777
No 475
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=22.49 E-value=1.9e+02 Score=25.08 Aligned_cols=17 Identities=0% Similarity=-0.046 Sum_probs=10.5
Q ss_pred HHHHHHHHHcCCeEEEE
Q 019410 136 RAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 136 ~AlA~aa~~~Gl~~~iv 152 (341)
..+|..++..|+.-+++
T Consensus 125 ~~~a~~a~~~g~~GvV~ 141 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVV 141 (222)
T ss_dssp HHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 45677777777654443
No 476
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=22.43 E-value=3.8e+02 Score=23.12 Aligned_cols=12 Identities=8% Similarity=-0.036 Sum_probs=8.9
Q ss_pred CCCeEEEEeeCC
Q 019410 272 LKAKVHAFSVCD 283 (341)
Q Consensus 272 ~~~rVigVe~~g 283 (341)
..++|..|.+..
T Consensus 193 ~gi~v~~v~PG~ 204 (267)
T 1vl8_A 193 YGIRVNVIAPGW 204 (267)
T ss_dssp GTCEEEEEEECC
T ss_pred cCeEEEEEEecc
Confidence 368998888754
No 477
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=22.41 E-value=3.6e+02 Score=22.89 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=41.9
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. +..++..+++ +....+++.+-+++... ..+..++.++.+ .+|.
T Consensus 23 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v---~~~~~~~~~~~g------~id~ 83 (247)
T 3rwb_A 23 AARLAADGATVIVSDINA-------EGAKAAAASI---GKKARAIAADISDPGSV---KALFAEIQALTG------GIDI 83 (247)
T ss_dssp HHHHHHTTCEEEEECSCH-------HHHHHHHHHH---CTTEEECCCCTTCHHHH---HHHHHHHHHHHS------CCSE
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHh---CCceEEEEcCCCCHHHH---HHHHHHHHHHCC------CCCE
Confidence 444556799999987642 1123333333 33556666555555543 345667766653 6999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
+|..+|..
T Consensus 84 lv~nAg~~ 91 (247)
T 3rwb_A 84 LVNNASIV 91 (247)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999853
No 478
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=22.33 E-value=85 Score=28.92 Aligned_cols=29 Identities=7% Similarity=-0.067 Sum_probs=23.6
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |-.|.++|...++.|++++|+=.
T Consensus 9 VvIVGa--G~aGl~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 9 VLINGC--GIGGAMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECc--CHHHHHHHHHHHhCCCcEEEEeC
Confidence 444565 78999999999999999888744
No 479
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.28 E-value=3.8e+02 Score=23.08 Aligned_cols=70 Identities=13% Similarity=0.004 Sum_probs=0.0
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhC--CCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCC
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEG--RRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKF 247 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g--~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~ 247 (341)
.+.+...|++|+.+.+.. ...+.+.+++...+ ....++..+-.++.. ...+..++.++.+ .+
T Consensus 49 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---v~~~~~~~~~~~g------~i 112 (279)
T 1xg5_A 49 ARALVQQGLKVVGCARTV-------GNIEELAAECKSAGYPGTLIPYRCDLSNEED---ILSMFSAIRSQHS------GV 112 (279)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHHHHTTCSSEEEEEECCTTCHHH---HHHHHHHHHHHHC------CC
T ss_pred HHHHHHCCCEEEEEECCh-------HHHHHHHHHHHhcCCCceEEEEEecCCCHHH---HHHHHHHHHHhCC------CC
Q ss_pred CEEEEcCC
Q 019410 248 DDIVVACG 255 (341)
Q Consensus 248 D~Ivv~vG 255 (341)
|.||..+|
T Consensus 113 D~vi~~Ag 120 (279)
T 1xg5_A 113 DICINNAG 120 (279)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
No 480
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=22.24 E-value=1.3e+02 Score=26.17 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=23.5
Q ss_pred CeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 122 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 122 ~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
..||| |++ |--|.++|..-.+.|.+++++-+
T Consensus 32 ~vlVT-Gas-~GIG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 32 SAIVS-GGA-GGLGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCC-ChHHHHHHHHHHHCCCEEEEEeC
Confidence 44555 544 67899999999999999777654
No 481
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=22.16 E-value=81 Score=28.71 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=23.4
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|+..|| |=.|.++|+..++.|++++|+=+.
T Consensus 7 VvIvG~--G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 7 VLVVGG--GPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc--CHHHHHHHHHHHHCCCCEEEEeCC
Confidence 343565 789999999999999998887443
No 482
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=22.09 E-value=4.2e+02 Score=23.62 Aligned_cols=142 Identities=12% Similarity=0.081 Sum_probs=73.2
Q ss_pred HHHHHH-cCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCC--C-------CCc----chhHHHHHhCCC
Q 019410 113 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--D-------PGL----IGNLLVERLVGA 178 (341)
Q Consensus 113 l~~A~~-~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~--~-------~~~----~gn~~~~~~~GA 178 (341)
+.+... .+.+.|| |...+....+++-.+...+++.+............ . +.. ..-...+..+|.
T Consensus 65 ~~~li~~~~v~~ii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 142 (379)
T 3n0w_A 65 AREWFDRDGVDAIF--DVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGY 142 (379)
T ss_dssp HHHHHHHSCCCEEE--ECCCHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCceEEE--cCCCcHHHHHHHHHHHHcCceEEEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHHHHHcCC
Confidence 344444 6788777 34556778888999999999887663322111110 0 000 011233445565
Q ss_pred E-EEEEC-CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEc
Q 019410 179 H-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 253 (341)
Q Consensus 179 e-V~~v~-~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~ 253 (341)
+ |.++. +..|. ....+.+.+.+++.|... ..++.+..+. .....+|.+ ..+|.||++
T Consensus 143 ~~vaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~l~~i~~--------~~~d~v~~~ 204 (379)
T 3n0w_A 143 KTWFLMLPDAAYG----DLMNAAIRRELTAGGGQIVGSVRFPFETQDF------SSYLLQAKA--------SGAQLIVST 204 (379)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHHTCEEEEEEEECTTCCCC------HHHHHHHHH--------HTCSEEEEC
T ss_pred cEEEEEecccchh----HHHHHHHHHHHHHcCCEEEEEEeCCCCCCCH------HHHHHHHHH--------CCCCEEEEe
Confidence 4 54443 22221 122344444555544221 1234332221 122233322 258988875
Q ss_pred CCchhHHHHHHHHHhcCCCCCe
Q 019410 254 CGSGGTIAGLSLGSWLGTLKAK 275 (341)
Q Consensus 254 vGtGGt~aGl~~~~k~~~~~~r 275 (341)
+.+..+.++...++..+.+.+
T Consensus 205 -~~~~~~~~~~~~~~~~g~~~~ 225 (379)
T 3n0w_A 205 -SGGAANINIMKQAREFGLPSK 225 (379)
T ss_dssp -CCHHHHHHHHHHHHHTTCSCS
T ss_pred -cccchHHHHHHHHHHcCCCCC
Confidence 556777888888888876665
No 483
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=22.09 E-value=2.7e+02 Score=25.56 Aligned_cols=86 Identities=8% Similarity=0.092 Sum_probs=48.5
Q ss_pred HHHHHHHcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCCC--cchhHHHHHhCCCEEEEECCcccc
Q 019410 112 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG--LIGNLLVERLVGAHIELISKEEYS 189 (341)
Q Consensus 112 ll~~A~~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~~--~~gn~~~~~~~GAeV~~v~~~~~~ 189 (341)
+...+.+.|.+.||+. +. -++..-+..|-.+.+|.|.-.+.-...-. +..+...+...||+++++++.-|.
T Consensus 163 lA~~a~~~G~dGvV~s-~~------E~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~ 235 (303)
T 3ru6_A 163 FSKISYENGLDGMVCS-VF------ESKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYK 235 (303)
T ss_dssp HHHHHHHTTCSEEECC-TT------THHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHHcCCCEEEEC-HH------HHHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhC
Confidence 3445667789998852 22 14455566787788888865432100000 112566777899999999875443
Q ss_pred ccCcHHHHHHHHHHH
Q 019410 190 KIGSVTLTNILKEKL 204 (341)
Q Consensus 190 ~~~~~~~~~~~a~~l 204 (341)
..+..+.++++.+++
T Consensus 236 a~dp~~a~~~i~~~i 250 (303)
T 3ru6_A 236 NENPRAVCEKILNKI 250 (303)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 322233344444444
No 484
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.04 E-value=3.6e+02 Score=22.81 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=41.8
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. +..+++++++ +....+++.+-.++.. ...+..++.++++ .+|.
T Consensus 26 a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~---~~~~~~~~~D~~~~~~---~~~~~~~~~~~~g------~id~ 86 (261)
T 3n74_A 26 AKRFAKGGAKVVIVDRDK-------AGAERVAGEI---GDAALAVAADISKEAD---VDAAVEAALSKFG------KVDI 86 (261)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHH---CTTEEEEECCTTSHHH---HHHHHHHHHHHHS------CCCE
T ss_pred HHHHHHCCCEEEEEcCCH-------HHHHHHHHHh---CCceEEEEecCCCHHH---HHHHHHHHHHhcC------CCCE
Confidence 444555799999987642 1223334333 3345566655555543 3345667777664 6999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
+|..+|.+
T Consensus 87 li~~Ag~~ 94 (261)
T 3n74_A 87 LVNNAGIG 94 (261)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 99999864
No 485
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=21.95 E-value=4.3e+02 Score=23.66 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=72.8
Q ss_pred HcCCCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCCCC-------C----cchhHHHHHhCCC-EEEEE-C
Q 019410 118 AQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP-------G----LIGNLLVERLVGA-HIELI-S 184 (341)
Q Consensus 118 ~~g~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~~~-------~----~~gn~~~~~~~GA-eV~~v-~ 184 (341)
+.+...|+ |...|....+++-.+.+.+++.+.............+ . ...-...++..|. +|.++ .
T Consensus 70 ~d~V~aii--G~~~S~~~~a~~~~~~~~~vp~i~~~a~~~~~~~~~~~~fr~~~~~~~~~~~~~~~~~~~g~k~vaii~~ 147 (371)
T 4f06_A 70 KEKVQYLA--GLYFTPNAMAVAPLLQEAKVPMVVMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGATKVAIAVS 147 (371)
T ss_dssp TSCCSEEE--ECCSHHHHHHHGGGHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCEEEE--ecccccchHHHHHHHHhhcCCccccccccchhcccCCcceecccchhhhhhhhhhhhhhcCceEEEEEcC
Confidence 34667666 5556778888888999999987655332211111111 0 0112334555665 44333 3
Q ss_pred CccccccCcHHHHHHHHHHHHHhCCCc---EEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEcCCchhHHH
Q 019410 185 KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 261 (341)
Q Consensus 185 ~~~~~~~~~~~~~~~~a~~l~~~g~~~---~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~a 261 (341)
+..|-. ...+...+.+++.|... ..+|.+..+.. ....+|.+ ..+|.|++....|....
T Consensus 148 ~~~~g~----~~~~~~~~~~~~~g~~vv~~~~~~~~~~d~~------~~l~~i~~--------~~pd~v~~~~~~~~~~~ 209 (371)
T 4f06_A 148 DYGPGI----DAETAFKKTFEAEGGKVVEAVRMPLSTTDFG------PIMQRIKN--------SGADMIFTFLPAGPPTL 209 (371)
T ss_dssp SSHHHH----HHHHHHHHHHHHTTCEEEEEEEECTTCCCCH------HHHHHHHH--------HTCSEEEEECCTTHHHH
T ss_pred Ccccch----hHHHHHHHHHHhcCCceEEEEecCcccccHH------HHHHHHHh--------cCCCEEEEEeccCchhh
Confidence 333321 12233444455544221 22344433221 22234432 25899998887777777
Q ss_pred HHHHHHhcCCCC---CeEEEE
Q 019410 262 GLSLGSWLGTLK---AKVHAF 279 (341)
Q Consensus 262 Gl~~~~k~~~~~---~rVigV 279 (341)
.+...++..+.+ ..+++.
T Consensus 210 ~~~~~~~~~g~~~~~~~~~~~ 230 (371)
T 4f06_A 210 GFVKAYIDNGLKAGGVKLMST 230 (371)
T ss_dssp HHHHHHHHTTTTTTTCEEEEE
T ss_pred HHHHHHHHhhhhccCcEEEEe
Confidence 777777766543 345443
No 486
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=21.68 E-value=4.3e+02 Score=23.56 Aligned_cols=44 Identities=9% Similarity=-0.026 Sum_probs=32.2
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEcCCchhHHHHHHHHHhcCCC----CCeEEEEee
Q 019410 230 AIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 281 (341)
Q Consensus 230 ~a~EI~~Ql~~~~~g~~~D~Ivv~vGtGGt~aGl~~~~k~~~~----~~rVigVe~ 281 (341)
.+.+++++- ..||+||+ .+..++.|+..+++..|. ++.|+|++-
T Consensus 258 ~~~~ll~~~------~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvigfD~ 305 (366)
T 3h5t_A 258 VAKELLETH------PDLTAVLC--TVDALAFGVLEYLKSVGKSAPADLSLTGFDG 305 (366)
T ss_dssp HHHHHHHHC------TTCCEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred HHHHHHcCC------CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 445565542 36999997 456788899999998773 678999873
No 487
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=21.65 E-value=1e+02 Score=28.32 Aligned_cols=53 Identities=8% Similarity=-0.004 Sum_probs=36.4
Q ss_pred eEEEeCC-CcchHHHHHHHHHHHc-CCeEEEEEcCCCCCcCCCCCcchhHHHHHhCCCEEEEEC
Q 019410 123 CIITIGG-IQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 184 (341)
Q Consensus 123 ~vVt~G~-s~GNhg~AlA~aa~~~-Gl~~~ivvp~~~~~~~~~~~~~gn~~~~~~~GAeV~~v~ 184 (341)
+|.-.|- ..+|.+++++.+++++ |++++++-|..-. | ...+ ++..|+++..+.
T Consensus 151 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~-----~--~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 151 VFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLR-----A--RKEI--LDELNYPVKEVE 205 (299)
T ss_dssp EEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGC-----C--CHHH--HTTCCSCEEEES
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhc-----C--CHHH--HHHcCCeEEEeC
Confidence 3444443 3479999999999999 9999999986541 1 1122 456787766654
No 488
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=21.59 E-value=97 Score=26.72 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=23.9
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |-.|.++|...++.|++++++=+
T Consensus 5 vvIIG~--G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 5 VIIIGG--SYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeC
Confidence 444566 78999999999999999888854
No 489
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=21.49 E-value=2.6e+02 Score=27.33 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHc-C----CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 107 RKLEFLMADAVAQ-G----ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 107 Rkl~~ll~~A~~~-g----~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|+..+.+.++.+. + .++|+..| .||-|..+|....++|.+++.+-+.
T Consensus 216 ~Gv~~~~~~~~~~~~~~l~Gk~vaVQG--~GnVG~~aa~~L~e~GakvVavsD~ 267 (450)
T 4fcc_A 216 YGLVYFTEAMLKRHGMGFEGMRVSVSG--SGNVAQYAIEKAMEFGARVITASDS 267 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCEEEEEC--CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred eeHHHHHHHHHHHcCCCcCCCEEEEeC--CChHHHHHHHHHHhcCCeEEEEecC
Confidence 5666777776543 2 24566555 3999999999999999998877653
No 490
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=21.42 E-value=89 Score=28.34 Aligned_cols=29 Identities=10% Similarity=0.182 Sum_probs=23.3
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |=.|.++|+..++.|++++|+=.
T Consensus 9 VvVIG~--Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 9 VVVLGS--GVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEECC--CHHHHHHHHHHHhCCCEEEEEec
Confidence 444565 78999999999999999887743
No 491
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=21.38 E-value=82 Score=29.13 Aligned_cols=30 Identities=13% Similarity=0.219 Sum_probs=23.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEcC
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 155 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~ 155 (341)
|+..|| |-.|.++|+..++.|++++|+=..
T Consensus 8 VvIIGg--G~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 8 VLVIGA--GPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEECC--SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 444565 789999999999999998887444
No 492
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.34 E-value=2.2e+02 Score=26.83 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=28.6
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCC
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 157 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~ 157 (341)
.+.|+..|+ |..|.-+|...+++|.+++++-+...
T Consensus 170 ~~~vvViGg--G~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGG--GYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 356666776 79999999999999999999987543
No 493
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=21.30 E-value=87 Score=28.49 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=23.7
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
.+.+| .|| |-.|.++|+..++.|++++|+=.
T Consensus 6 ~dVvI-IGg--Gi~Gl~~A~~La~~G~~V~lle~ 36 (382)
T 1y56_B 6 SEIVV-IGG--GIVGVTIAHELAKRGEEVTVIEK 36 (382)
T ss_dssp CSEEE-ECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEE-ECC--CHHHHHHHHHHHHCCCeEEEEeC
Confidence 34444 565 78999999999999999666643
No 494
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=21.26 E-value=1.8e+02 Score=27.16 Aligned_cols=73 Identities=14% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHhCC-CEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 171 LVERLVG-AHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 171 ~~~~~~G-AeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
..++.+| -++.++.+. ......+++.+.|.+.+ ..++.....||.. ....|+.+++.+ ..+|
T Consensus 29 ~~l~~~g~~r~liVtd~-----~~~~~~~~v~~~L~~~~--~~~f~~v~~~p~~-----~~v~~~~~~~~~----~~~D- 91 (358)
T 3jzd_A 29 AEVERLGAKRALVLCTP-----NQQAEAERIADLLGPLS--AGVYAGAVMHVPI-----ESARDATARARE----AGAD- 91 (358)
T ss_dssp HHHHHTTCSCEEEECCG-----GGHHHHHHHHHHHGGGE--EEEECCCCTTCBH-----HHHHHHHHHHHH----HTCS-
T ss_pred HHHHHhCCCeEEEEeCC-----cHHHHHHHHHHHhccCC--EEEecCCcCCCCH-----HHHHHHHHHhhc----cCCC-
Q ss_pred EEEcCCchhHH
Q 019410 250 IVVACGSGGTI 260 (341)
Q Consensus 250 Ivv~vGtGGt~ 260 (341)
+|+++|+|..+
T Consensus 92 ~IIavGGGsvi 102 (358)
T 3jzd_A 92 CAVAVGGGSTT 102 (358)
T ss_dssp EEEEEESHHHH
T ss_pred EEEEeCCcHHH
No 495
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=21.19 E-value=3.8e+02 Score=22.77 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=41.5
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHh-CC-CcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCC
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKE-GR-RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKF 247 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~-g~-~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~ 247 (341)
.+.+...|++|+.+.+.. . ..+ . .+++.++ +. +..+++.+-.++... ..+..++.++.+ .+
T Consensus 26 a~~l~~~G~~V~~~~r~~--~--~~~---~-~~~~~~~~~~~~~~~~~~D~~~~~~v---~~~~~~~~~~~g------~i 88 (266)
T 3oig_A 26 ARSLHEAGARLIFTYAGE--R--LEK---S-VHELAGTLDRNDSIILPCDVTNDAEI---ETCFASIKEQVG------VI 88 (266)
T ss_dssp HHHHHHTTCEEEEEESSG--G--GHH---H-HHHHHHTSSSCCCEEEECCCSSSHHH---HHHHHHHHHHHS------CC
T ss_pred HHHHHHCCCEEEEecCch--H--HHH---H-HHHHHHhcCCCCceEEeCCCCCHHHH---HHHHHHHHHHhC------Ce
Confidence 444556799999987642 1 111 2 2222322 22 456666665565543 345667777663 69
Q ss_pred CEEEEcCCch
Q 019410 248 DDIVVACGSG 257 (341)
Q Consensus 248 D~Ivv~vGtG 257 (341)
|.+|..+|..
T Consensus 89 d~li~~Ag~~ 98 (266)
T 3oig_A 89 HGIAHCIAFA 98 (266)
T ss_dssp CEEEECCCCC
T ss_pred eEEEEccccc
Confidence 9999999865
No 496
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=21.17 E-value=4.1e+02 Score=24.42 Aligned_cols=60 Identities=20% Similarity=0.176 Sum_probs=37.6
Q ss_pred CCeEEEeCCCcchHHHHHHHHHHHcCCeEEEEEcCCCCCcCC-CCCc-chhHHHHHhCCCEEEE
Q 019410 121 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ-DPGL-IGNLLVERLVGAHIEL 182 (341)
Q Consensus 121 ~~~vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp~~~~~~~~-~~~~-~gn~~~~~~~GAeV~~ 182 (341)
.+.++..|+ |+.|.-+|...+.+|.+++++.+........ .+.. ..-.+.++..|.+++.
T Consensus 152 ~~~vvViGg--G~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 213 (415)
T 3lxd_A 152 AKNAVVIGG--GYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT 213 (415)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECC--CHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE
Confidence 355665675 7999999999999999999988765432110 0000 0113345667877654
No 497
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=21.15 E-value=51 Score=33.23 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=25.8
Q ss_pred CCCCEEEEcCCchhHHHHHHHHHhcC-CCCCeEEEEeeCC
Q 019410 245 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCD 283 (341)
Q Consensus 245 ~~~D~Ivv~vGtGGt~aGl~~~~k~~-~~~~rVigVe~~g 283 (341)
..+|+|||..|++|.. .+.++. .+..+|.-+|..+
T Consensus 18 ~~yDyIIVGgG~AG~v----lA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLT----TAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHH----HHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHH----HHHHHHhCCCCcEEEEecCC
Confidence 3589999988776654 445543 4788999999876
No 498
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=21.13 E-value=83 Score=29.97 Aligned_cols=28 Identities=18% Similarity=0.131 Sum_probs=23.5
Q ss_pred eEEEeCCCcchHHHHHHHHHHHcCCeEEEE
Q 019410 123 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 152 (341)
Q Consensus 123 ~vVt~G~s~GNhg~AlA~aa~~~Gl~~~iv 152 (341)
.||..|| |-.|.+.|+..++.|++++|+
T Consensus 3 ~VvVIGa--G~~GL~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 3 PTTVIGA--GFGGLALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECC--cHHHHHHHHHHHHCCCcEEEE
Confidence 4555676 889999999999999998877
No 499
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=21.12 E-value=94 Score=28.22 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=22.9
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCCeEEEEEc
Q 019410 124 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 154 (341)
Q Consensus 124 vVt~G~s~GNhg~AlA~aa~~~Gl~~~ivvp 154 (341)
|+..|| |=.|.++|+..++.|++++|+=.
T Consensus 6 vvIIGa--G~~Gl~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 6 VIVVGA--GSMGMAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEeC
Confidence 444565 78999999999999999777743
No 500
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.92 E-value=4.1e+02 Score=22.96 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=41.5
Q ss_pred HHHHHhCCCEEEEECCccccccCcHHHHHHHHHHHHHhCCCcEEeCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCCCE
Q 019410 170 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 249 (341)
Q Consensus 170 ~~~~~~~GAeV~~v~~~~~~~~~~~~~~~~~a~~l~~~g~~~~~ip~g~~n~~~~~G~~t~a~EI~~Ql~~~~~g~~~D~ 249 (341)
.+.+...|++|+.+++.. +..+++.+++ +....++..+-.++.. ...+..++.++.+ .+|.
T Consensus 44 a~~la~~G~~V~~~~r~~-------~~~~~~~~~~---~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~g------~iD~ 104 (266)
T 3grp_A 44 ARCFHAQGAIVGLHGTRE-------DKLKEIAADL---GKDVFVFSANLSDRKS---IKQLAEVAEREME------GIDI 104 (266)
T ss_dssp HHHHHHTTCEEEEEESCH-------HHHHHHHHHH---CSSEEEEECCTTSHHH---HHHHHHHHHHHHT------SCCE
T ss_pred HHHHHHCCCEEEEEeCCH-------HHHHHHHHHh---CCceEEEEeecCCHHH---HHHHHHHHHHHcC------CCCE
Confidence 344556799999887532 1123333332 3355666655555544 3345667766664 6999
Q ss_pred EEEcCCch
Q 019410 250 IVVACGSG 257 (341)
Q Consensus 250 Ivv~vGtG 257 (341)
+|..+|..
T Consensus 105 lvnnAg~~ 112 (266)
T 3grp_A 105 LVNNAGIT 112 (266)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999964
Done!