Query 019414
Match_columns 341
No_of_seqs 129 out of 1606
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 09:16:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019414.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019414hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 4.5E-59 9.7E-64 404.2 26.5 336 1-339 31-366 (366)
2 COG1064 AdhP Zn-dependent alco 100.0 7.4E-58 1.6E-62 405.3 24.7 303 1-340 32-338 (339)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.7E-56 3.7E-61 381.9 26.8 338 2-339 37-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 5.7E-55 1.2E-59 375.4 25.7 313 1-341 33-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 3.2E-51 6.8E-56 351.4 23.4 311 1-340 40-355 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 5.1E-50 1.1E-54 373.1 29.6 333 1-337 37-370 (371)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 6E-50 1.3E-54 372.0 29.7 338 1-339 30-368 (368)
8 cd08301 alcohol_DH_plants Plan 100.0 1.2E-49 2.7E-54 370.3 29.2 338 1-338 31-369 (369)
9 PLN02740 Alcohol dehydrogenase 100.0 1.6E-49 3.5E-54 370.7 29.0 339 1-339 39-381 (381)
10 PLN02827 Alcohol dehydrogenase 100.0 2.4E-49 5.2E-54 368.8 29.6 338 1-341 41-378 (378)
11 cd08300 alcohol_DH_class_III c 100.0 5.7E-49 1.2E-53 365.6 29.7 337 1-338 31-368 (368)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.1E-48 4.6E-53 360.6 28.0 326 1-338 30-357 (358)
13 PRK09880 L-idonate 5-dehydroge 100.0 6.1E-48 1.3E-52 355.4 27.1 308 1-339 31-343 (343)
14 cd08277 liver_alcohol_DH_like 100.0 2.2E-47 4.8E-52 354.6 29.5 335 1-338 31-365 (365)
15 cd08239 THR_DH_like L-threonin 100.0 2.2E-47 4.7E-52 351.4 27.4 309 1-339 28-339 (339)
16 COG1063 Tdh Threonine dehydrog 100.0 1.2E-46 2.6E-51 345.7 27.5 314 1-339 29-350 (350)
17 TIGR02819 fdhA_non_GSH formald 100.0 3.8E-46 8.2E-51 348.1 25.5 321 1-340 37-391 (393)
18 PRK10309 galactitol-1-phosphat 100.0 8.2E-45 1.8E-49 335.3 27.3 312 1-340 29-347 (347)
19 PLN02586 probable cinnamyl alc 100.0 4.1E-45 8.8E-50 338.3 25.2 309 1-339 41-353 (360)
20 PLN02178 cinnamyl-alcohol dehy 100.0 6.4E-45 1.4E-49 338.2 25.6 309 1-339 35-348 (375)
21 COG0604 Qor NADPH:quinone redu 100.0 3.9E-45 8.5E-50 331.5 22.9 286 1-339 31-326 (326)
22 TIGR03201 dearomat_had 6-hydro 100.0 1.8E-44 3.9E-49 333.1 27.6 308 1-339 27-349 (349)
23 cd08299 alcohol_DH_class_I_II_ 100.0 1.6E-43 3.5E-48 329.3 30.1 337 1-339 36-373 (373)
24 cd05279 Zn_ADH1 Liver alcohol 100.0 3.2E-43 6.8E-48 326.7 29.7 336 1-338 29-365 (365)
25 TIGR02822 adh_fam_2 zinc-bindi 100.0 2E-43 4.4E-48 323.2 25.3 294 1-337 31-328 (329)
26 cd08230 glucose_DH Glucose deh 100.0 2.7E-43 5.8E-48 326.1 25.1 305 1-339 29-355 (355)
27 cd08233 butanediol_DH_like (2R 100.0 1.7E-42 3.7E-47 320.4 28.1 308 1-338 28-351 (351)
28 cd08231 MDR_TM0436_like Hypoth 100.0 2.1E-42 4.6E-47 320.9 28.5 320 1-339 29-361 (361)
29 TIGR03366 HpnZ_proposed putati 100.0 1.3E-42 2.8E-47 311.1 22.9 268 28-320 1-280 (280)
30 PLN02514 cinnamyl-alcohol dehy 100.0 5.2E-42 1.1E-46 317.5 25.7 310 1-340 38-351 (357)
31 KOG1197 Predicted quinone oxid 100.0 1.1E-42 2.3E-47 288.9 18.2 284 1-340 39-331 (336)
32 cd08278 benzyl_alcohol_DH Benz 100.0 3.6E-41 7.9E-46 312.9 29.2 332 1-338 31-365 (365)
33 cd08237 ribitol-5-phosphate_DH 100.0 3E-41 6.5E-46 310.5 21.0 294 1-340 29-340 (341)
34 cd08279 Zn_ADH_class_III Class 100.0 7E-40 1.5E-44 304.2 29.5 332 1-337 29-362 (363)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 5.6E-40 1.2E-44 303.6 28.1 314 1-339 28-351 (351)
36 PRK10083 putative oxidoreducta 100.0 1.7E-39 3.8E-44 298.9 26.9 308 1-341 28-339 (339)
37 cd05278 FDH_like Formaldehyde 100.0 2.7E-39 5.9E-44 298.4 27.7 313 1-339 29-347 (347)
38 cd08283 FDH_like_1 Glutathione 100.0 4E-39 8.6E-44 301.3 28.5 329 1-339 29-386 (386)
39 cd08238 sorbose_phosphate_red 100.0 3.3E-39 7.1E-44 303.9 25.5 300 1-340 30-369 (410)
40 cd08296 CAD_like Cinnamyl alco 100.0 8.7E-39 1.9E-43 293.5 26.4 302 1-338 29-333 (333)
41 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.7E-38 3.8E-43 293.5 28.3 308 1-337 28-350 (350)
42 cd08284 FDH_like_2 Glutathione 100.0 1.8E-38 4E-43 292.6 27.3 312 1-338 29-343 (344)
43 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.8E-38 6E-43 294.0 28.7 332 1-338 29-367 (367)
44 cd08286 FDH_like_ADH2 formalde 100.0 2.6E-38 5.6E-43 291.8 27.5 310 1-339 29-345 (345)
45 cd05284 arabinose_DH_like D-ar 100.0 3.3E-38 7.2E-43 290.4 27.2 304 1-339 29-340 (340)
46 PRK05396 tdh L-threonine 3-deh 100.0 5.4E-38 1.2E-42 289.2 27.3 308 1-340 29-341 (341)
47 PLN02702 L-idonate 5-dehydroge 100.0 5.4E-38 1.2E-42 291.7 27.2 309 1-338 45-363 (364)
48 TIGR01202 bchC 2-desacetyl-2-h 100.0 1E-38 2.2E-43 289.6 21.7 274 1-338 29-308 (308)
49 cd05285 sorbitol_DH Sorbitol d 100.0 4.6E-38 9.9E-43 289.9 26.1 308 1-337 26-341 (343)
50 cd08265 Zn_ADH3 Alcohol dehydr 100.0 4.8E-38 1E-42 293.9 26.6 310 1-337 55-383 (384)
51 cd08240 6_hydroxyhexanoate_dh_ 100.0 7.6E-38 1.6E-42 289.2 26.8 307 1-338 29-349 (350)
52 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.8E-37 4E-42 286.1 27.1 309 1-338 29-344 (345)
53 cd08246 crotonyl_coA_red croto 100.0 1.4E-37 3.1E-42 291.7 26.5 307 1-337 46-391 (393)
54 cd08287 FDH_like_ADH3 formalde 100.0 3E-37 6.6E-42 284.6 27.1 309 1-339 29-345 (345)
55 PLN03154 putative allyl alcoho 100.0 7E-38 1.5E-42 288.7 22.8 282 1-341 47-347 (348)
56 cd08282 PFDH_like Pseudomonas 100.0 2.1E-37 4.5E-42 288.8 26.1 319 1-339 29-375 (375)
57 cd05281 TDH Threonine dehydrog 100.0 1.3E-36 2.7E-41 280.1 27.5 308 1-339 29-341 (341)
58 cd08235 iditol_2_DH_like L-idi 100.0 1.4E-36 3E-41 279.9 27.7 308 1-338 28-343 (343)
59 cd08262 Zn_ADH8 Alcohol dehydr 100.0 9.2E-37 2E-41 281.0 26.4 298 1-338 27-341 (341)
60 PRK09422 ethanol-active dehydr 100.0 1.1E-36 2.3E-41 280.2 26.3 305 1-340 29-337 (338)
61 cd05283 CAD1 Cinnamyl alcohol 100.0 5.6E-37 1.2E-41 282.0 24.3 307 1-338 28-337 (337)
62 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.4E-36 3.1E-41 279.1 26.8 305 1-339 30-338 (338)
63 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.9E-36 4.1E-41 278.4 27.5 306 1-339 28-337 (337)
64 TIGR01751 crot-CoA-red crotony 100.0 1.3E-36 2.7E-41 285.6 26.2 310 1-340 41-388 (398)
65 cd08232 idonate-5-DH L-idonate 100.0 1.6E-36 3.4E-41 279.2 26.3 308 1-339 25-339 (339)
66 TIGR00692 tdh L-threonine 3-de 100.0 3.9E-36 8.5E-41 276.7 27.0 309 1-339 27-340 (340)
67 cd08242 MDR_like Medium chain 100.0 3.4E-36 7.4E-41 274.7 25.7 292 1-339 28-319 (319)
68 PRK13771 putative alcohol dehy 100.0 2.4E-36 5.2E-41 277.4 23.9 300 1-339 29-333 (334)
69 cd08236 sugar_DH NAD(P)-depend 100.0 1.1E-35 2.3E-40 274.1 27.9 309 1-337 28-343 (343)
70 cd08293 PTGR2 Prostaglandin re 100.0 3.2E-36 6.9E-41 277.8 23.7 282 1-339 40-345 (345)
71 cd08297 CAD3 Cinnamyl alcohol 100.0 2E-35 4.4E-40 272.1 27.0 305 1-339 30-341 (341)
72 cd08234 threonine_DH_like L-th 100.0 2.6E-35 5.6E-40 270.5 26.1 305 1-337 28-333 (334)
73 cd08291 ETR_like_1 2-enoyl thi 100.0 1.2E-35 2.5E-40 271.8 23.7 279 1-338 34-324 (324)
74 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.4E-35 5.3E-40 270.8 25.2 306 1-339 31-342 (342)
75 cd08295 double_bond_reductase_ 100.0 1.6E-35 3.5E-40 272.4 22.4 279 1-339 41-338 (338)
76 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.1E-35 4.5E-40 270.2 22.6 290 1-333 30-321 (325)
77 TIGR02825 B4_12hDH leukotriene 100.0 2.6E-35 5.5E-40 269.6 22.8 275 1-338 35-325 (325)
78 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9.4E-35 2E-39 266.3 25.2 300 1-338 29-332 (332)
79 cd08298 CAD2 Cinnamyl alcohol 100.0 1.1E-34 2.4E-39 265.9 24.5 294 1-337 33-329 (329)
80 cd08274 MDR9 Medium chain dehy 100.0 1.5E-34 3.2E-39 267.2 23.9 294 1-339 32-350 (350)
81 cd08245 CAD Cinnamyl alcohol d 100.0 1.9E-34 4E-39 264.4 24.2 300 1-337 28-330 (330)
82 cd08294 leukotriene_B4_DH_like 100.0 1.1E-34 2.5E-39 265.6 22.5 275 1-339 37-329 (329)
83 KOG0025 Zn2+-binding dehydroge 100.0 3.2E-34 7E-39 242.5 22.6 284 1-340 51-353 (354)
84 cd08292 ETR_like_2 2-enoyl thi 100.0 3.7E-34 7.9E-39 261.6 24.0 279 1-337 32-323 (324)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.2E-33 2.7E-38 256.3 23.9 271 1-303 30-306 (306)
86 cd05188 MDR Medium chain reduc 100.0 1.2E-33 2.6E-38 251.1 22.6 265 1-299 3-270 (271)
87 cd08276 MDR7 Medium chain dehy 100.0 1.8E-32 3.9E-37 251.5 25.2 300 1-338 31-335 (336)
88 cd08290 ETR 2-enoyl thioester 100.0 1.5E-32 3.3E-37 252.9 22.9 283 1-339 33-341 (341)
89 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.7E-32 6E-37 250.6 23.3 281 1-338 33-334 (336)
90 cd08244 MDR_enoyl_red Possible 100.0 3.3E-32 7.2E-37 248.6 23.7 283 1-339 31-324 (324)
91 cd08269 Zn_ADH9 Alcohol dehydr 100.0 6.6E-32 1.4E-36 245.3 25.2 280 1-337 23-311 (312)
92 KOG1198 Zinc-binding oxidoredu 100.0 7.7E-33 1.7E-37 251.3 18.9 285 1-341 36-347 (347)
93 cd05282 ETR_like 2-enoyl thioe 100.0 3.3E-32 7.1E-37 248.6 23.1 281 1-338 30-323 (323)
94 PRK10754 quinone oxidoreductas 100.0 4.2E-32 9.1E-37 248.5 21.8 285 1-339 32-327 (327)
95 cd08249 enoyl_reductase_like e 100.0 4.6E-31 1E-35 242.9 25.5 287 1-339 30-339 (339)
96 cd08250 Mgc45594_like Mgc45594 100.0 1.6E-31 3.4E-36 244.8 21.3 281 1-338 34-329 (329)
97 COG2130 Putative NADP-dependen 100.0 6E-31 1.3E-35 224.9 20.8 282 1-341 43-340 (340)
98 PTZ00354 alcohol dehydrogenase 100.0 8.3E-31 1.8E-35 240.3 22.7 284 1-340 32-329 (334)
99 cd08270 MDR4 Medium chain dehy 100.0 6.4E-31 1.4E-35 238.2 20.7 270 1-339 30-305 (305)
100 cd08243 quinone_oxidoreductase 100.0 8.7E-31 1.9E-35 238.6 21.7 282 1-337 31-319 (320)
101 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.3E-30 7.1E-35 235.6 24.6 284 1-339 31-325 (325)
102 cd05286 QOR2 Quinone oxidoredu 100.0 4.9E-30 1.1E-34 233.0 23.6 282 1-339 30-320 (320)
103 cd08289 MDR_yhfp_like Yhfp put 100.0 5.3E-30 1.1E-34 234.4 23.3 285 1-339 31-326 (326)
104 cd08251 polyketide_synthase po 100.0 8E-30 1.7E-34 230.2 23.3 281 1-336 11-302 (303)
105 cd08252 AL_MDR Arginate lyase 100.0 1.7E-29 3.7E-34 232.0 24.3 283 1-337 34-335 (336)
106 cd05195 enoyl_red enoyl reduct 100.0 8.8E-30 1.9E-34 228.1 21.8 278 1-336 4-292 (293)
107 smart00829 PKS_ER Enoylreducta 100.0 7.7E-30 1.7E-34 228.3 21.3 277 1-336 1-287 (288)
108 cd05288 PGDH Prostaglandin deh 100.0 4.8E-30 1E-34 235.0 20.3 275 1-336 36-328 (329)
109 TIGR02823 oxido_YhdH putative 100.0 2.3E-29 4.9E-34 230.0 23.7 282 1-338 30-322 (323)
110 cd08253 zeta_crystallin Zeta-c 100.0 4.2E-29 9.2E-34 227.5 23.5 287 1-339 31-325 (325)
111 cd08255 2-desacetyl-2-hydroxye 100.0 6.9E-29 1.5E-33 221.9 23.8 247 24-337 19-277 (277)
112 cd08247 AST1_like AST1 is a cy 100.0 9.8E-29 2.1E-33 228.6 23.6 290 1-338 32-351 (352)
113 cd05276 p53_inducible_oxidored 100.0 1.4E-28 3.1E-33 223.7 22.5 279 1-336 31-322 (323)
114 cd08248 RTN4I1 Human Reticulon 100.0 4E-29 8.6E-34 230.9 18.8 281 1-337 33-349 (350)
115 cd08288 MDR_yhdh Yhdh putative 100.0 4.7E-28 1E-32 221.4 24.1 283 1-339 31-324 (324)
116 cd08273 MDR8 Medium chain dehy 100.0 2E-28 4.4E-33 224.4 21.5 277 1-337 31-330 (331)
117 cd08268 MDR2 Medium chain dehy 100.0 5E-28 1.1E-32 220.8 23.9 286 1-338 31-327 (328)
118 TIGR02824 quinone_pig3 putativ 100.0 4.5E-28 9.7E-33 220.8 21.8 281 1-338 31-324 (325)
119 cd08272 MDR6 Medium chain dehy 100.0 6.1E-28 1.3E-32 220.1 21.6 282 1-339 31-326 (326)
120 cd08275 MDR3 Medium chain dehy 100.0 3.1E-27 6.6E-32 216.8 23.8 282 1-339 30-337 (337)
121 cd08271 MDR5 Medium chain dehy 100.0 2.1E-27 4.5E-32 216.8 22.6 285 1-339 31-325 (325)
122 cd08267 MDR1 Medium chain dehy 100.0 1.4E-27 3.1E-32 217.3 21.0 278 1-336 30-318 (319)
123 cd08241 QOR1 Quinone oxidoredu 100.0 2.7E-27 5.8E-32 215.4 22.5 280 1-337 31-322 (323)
124 cd05289 MDR_like_2 alcohol deh 100.0 1.4E-27 3.1E-32 216.0 19.4 272 1-336 31-308 (309)
125 KOG1202 Animal-type fatty acid 99.9 1.7E-27 3.8E-32 231.0 14.4 272 4-339 1451-1741(2376)
126 KOG1196 Predicted NAD-dependen 99.9 6.9E-24 1.5E-28 181.1 20.8 278 1-340 41-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 3.4E-22 7.3E-27 153.0 3.7 103 1-125 5-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.7E-17 3.8E-22 131.0 10.6 127 167-301 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 2E-12 4.3E-17 119.9 15.3 176 145-340 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 2E-11 4.3E-16 116.0 16.0 154 154-312 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.1 6.5E-12 1.4E-16 98.6 -0.5 120 200-337 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.7 1.2E-07 2.7E-12 84.5 10.0 167 151-331 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 2E-06 4.4E-11 81.9 12.3 105 155-261 162-287 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.4 1.6E-08 3.4E-13 95.3 -3.2 160 28-239 89-253 (417)
135 PRK05476 S-adenosyl-L-homocyst 98.2 1.8E-05 4E-10 74.0 13.1 103 144-261 198-302 (425)
136 PRK00517 prmA ribosomal protei 98.2 3.4E-05 7.4E-10 67.8 13.0 133 110-261 78-216 (250)
137 PRK08306 dipicolinate synthase 98.2 4.5E-05 9.7E-10 68.7 13.9 97 156-264 151-247 (296)
138 TIGR00936 ahcY adenosylhomocys 98.1 4.6E-05 1E-09 70.9 12.6 101 146-261 183-285 (406)
139 PRK00045 hemA glutamyl-tRNA re 98.1 8.8E-08 1.9E-12 90.6 -6.7 161 28-239 91-255 (423)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.0 1.4E-05 3.1E-10 72.5 7.1 109 120-239 139-251 (311)
141 PLN02494 adenosylhomocysteinas 98.0 8.2E-05 1.8E-09 70.0 12.0 101 145-260 241-343 (477)
142 PRK12771 putative glutamate sy 98.0 3.4E-06 7.3E-11 83.0 2.5 99 153-258 133-253 (564)
143 COG2518 Pcm Protein-L-isoaspar 98.0 3.1E-05 6.7E-10 64.8 7.4 101 148-259 64-170 (209)
144 TIGR00518 alaDH alanine dehydr 97.8 0.00065 1.4E-08 63.2 14.3 97 156-260 166-269 (370)
145 TIGR02853 spore_dpaA dipicolin 97.7 0.0007 1.5E-08 60.7 12.2 97 156-264 150-246 (287)
146 PTZ00075 Adenosylhomocysteinas 97.7 0.00057 1.2E-08 64.6 11.7 92 154-260 251-343 (476)
147 TIGR00406 prmA ribosomal prote 97.6 0.00041 8.8E-09 62.3 9.6 98 154-260 157-261 (288)
148 PRK08324 short chain dehydroge 97.6 0.00063 1.4E-08 68.6 11.6 114 109-235 385-507 (681)
149 COG2242 CobL Precorrin-6B meth 97.6 0.00087 1.9E-08 55.1 10.2 104 149-259 27-136 (187)
150 PF11017 DUF2855: Protein of u 97.6 0.0044 9.5E-08 55.5 15.2 139 110-261 90-234 (314)
151 PRK11705 cyclopropane fatty ac 97.4 0.0034 7.4E-08 58.7 13.6 113 137-259 148-268 (383)
152 PF01488 Shikimate_DH: Shikima 97.4 0.00071 1.5E-08 53.5 7.2 73 156-237 11-86 (135)
153 PRK13943 protein-L-isoaspartat 97.3 0.002 4.3E-08 58.5 10.6 102 149-257 73-179 (322)
154 PRK00377 cbiT cobalt-precorrin 97.3 0.004 8.7E-08 52.6 11.6 103 149-257 33-144 (198)
155 COG4221 Short-chain alcohol de 97.2 0.0023 4.9E-08 54.9 8.8 78 157-236 6-91 (246)
156 COG3967 DltE Short-chain dehyd 97.1 0.0033 7.2E-08 52.3 8.4 77 157-235 5-87 (245)
157 TIGR00438 rrmJ cell division p 97.1 0.01 2.2E-07 49.7 11.6 101 151-258 27-146 (188)
158 PF01135 PCMT: Protein-L-isoas 97.0 0.00092 2E-08 56.9 4.9 101 148-257 64-171 (209)
159 KOG1209 1-Acyl dihydroxyaceton 97.0 0.0092 2E-07 49.9 10.2 79 157-236 7-91 (289)
160 PRK05786 fabG 3-ketoacyl-(acyl 97.0 0.016 3.4E-07 50.1 12.6 102 156-260 4-137 (238)
161 PRK05993 short chain dehydroge 96.9 0.0089 1.9E-07 53.3 10.3 79 156-235 3-85 (277)
162 PF12847 Methyltransf_18: Meth 96.9 0.0034 7.3E-08 47.5 6.5 94 156-257 1-110 (112)
163 PF02353 CMAS: Mycolic acid cy 96.9 0.0036 7.8E-08 55.6 7.4 103 147-259 53-167 (273)
164 PRK06182 short chain dehydroge 96.8 0.008 1.7E-07 53.4 9.5 78 157-236 3-84 (273)
165 COG1748 LYS9 Saccharopine dehy 96.8 0.012 2.6E-07 54.4 10.7 97 158-261 2-102 (389)
166 COG2230 Cfa Cyclopropane fatty 96.8 0.05 1.1E-06 48.1 14.0 107 142-263 58-181 (283)
167 PRK13942 protein-L-isoaspartat 96.8 0.0065 1.4E-07 51.9 8.4 101 148-257 68-175 (212)
168 TIGR02469 CbiT precorrin-6Y C5 96.8 0.013 2.9E-07 44.9 9.5 101 150-258 13-122 (124)
169 PF01262 AlaDh_PNT_C: Alanine 96.8 0.006 1.3E-07 50.1 7.4 97 157-260 20-141 (168)
170 PF13460 NAD_binding_10: NADH( 96.8 0.018 4E-07 47.6 10.5 92 160-260 1-99 (183)
171 COG2519 GCD14 tRNA(1-methylade 96.7 0.018 3.8E-07 49.8 10.2 103 149-259 87-196 (256)
172 PRK05693 short chain dehydroge 96.7 0.011 2.4E-07 52.5 9.4 75 159-235 3-81 (274)
173 PRK13944 protein-L-isoaspartat 96.7 0.012 2.5E-07 50.1 8.9 101 148-257 64-172 (205)
174 COG4122 Predicted O-methyltran 96.7 0.022 4.7E-07 48.6 10.2 105 150-258 53-166 (219)
175 PRK12742 oxidoreductase; Provi 96.6 0.046 1E-06 47.1 12.7 77 156-236 5-85 (237)
176 PF02826 2-Hacid_dh_C: D-isome 96.6 0.02 4.4E-07 47.5 9.7 89 155-258 34-127 (178)
177 PRK08017 oxidoreductase; Provi 96.6 0.017 3.6E-07 50.6 9.5 77 158-235 3-83 (256)
178 PRK04148 hypothetical protein; 96.6 0.083 1.8E-06 41.3 12.0 95 155-259 15-110 (134)
179 PRK06139 short chain dehydroge 96.6 0.013 2.8E-07 53.7 8.9 79 156-236 6-94 (330)
180 PRK00536 speE spermidine synth 96.6 0.01 2.2E-07 52.2 7.7 99 157-259 73-172 (262)
181 PRK08177 short chain dehydroge 96.5 0.019 4.2E-07 49.3 9.5 77 158-236 2-81 (225)
182 COG0300 DltE Short-chain dehyd 96.5 0.019 4.2E-07 50.4 9.3 79 155-236 4-94 (265)
183 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.046 9.9E-07 52.4 12.6 78 156-235 209-293 (450)
184 PRK07060 short chain dehydroge 96.5 0.025 5.5E-07 49.0 10.1 77 156-236 8-87 (245)
185 COG2226 UbiE Methylase involve 96.5 0.033 7.2E-07 48.2 10.2 108 149-263 44-161 (238)
186 PRK00107 gidB 16S rRNA methylt 96.4 0.028 6.1E-07 47.0 9.3 98 153-258 42-145 (187)
187 PRK07326 short chain dehydroge 96.4 0.064 1.4E-06 46.3 12.0 79 156-236 5-92 (237)
188 PRK13940 glutamyl-tRNA reducta 96.4 0.015 3.3E-07 54.8 8.3 76 155-239 179-255 (414)
189 PRK03369 murD UDP-N-acetylmura 96.4 0.031 6.6E-07 54.2 10.6 74 153-237 8-81 (488)
190 PLN02366 spermidine synthase 96.4 0.024 5.3E-07 51.2 9.2 100 155-258 90-206 (308)
191 TIGR00080 pimt protein-L-isoas 96.3 0.011 2.3E-07 50.7 6.6 103 148-257 69-176 (215)
192 PLN03209 translocon at the inn 96.3 0.061 1.3E-06 52.4 12.3 47 150-197 73-120 (576)
193 PRK06057 short chain dehydroge 96.3 0.031 6.8E-07 49.0 9.7 79 156-236 6-89 (255)
194 PRK06953 short chain dehydroge 96.3 0.035 7.5E-07 47.6 9.4 77 158-236 2-80 (222)
195 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.01 2.2E-07 56.9 6.6 92 150-259 27-124 (450)
196 PRK07402 precorrin-6B methylas 96.2 0.11 2.3E-06 43.8 12.1 106 148-259 32-143 (196)
197 PRK00811 spermidine synthase; 96.2 0.031 6.8E-07 50.0 9.2 97 156-258 76-191 (283)
198 TIGR01470 cysG_Nterm siroheme 96.2 0.21 4.5E-06 42.4 13.4 116 156-282 8-124 (205)
199 PRK06949 short chain dehydroge 96.2 0.037 8.1E-07 48.4 9.3 79 156-236 8-96 (258)
200 PF08704 GCD14: tRNA methyltra 96.1 0.014 3E-07 50.9 6.3 108 148-259 32-147 (247)
201 KOG1205 Predicted dehydrogenas 96.1 0.067 1.5E-06 47.4 10.6 110 156-267 11-158 (282)
202 TIGR01318 gltD_gamma_fam gluta 96.1 0.033 7E-07 53.7 9.3 78 156-238 140-238 (467)
203 PRK05872 short chain dehydroge 96.1 0.032 6.9E-07 50.3 8.7 79 156-236 8-95 (296)
204 TIGR02356 adenyl_thiF thiazole 96.1 0.059 1.3E-06 45.7 9.8 35 156-190 20-54 (202)
205 PRK14967 putative methyltransf 96.1 0.082 1.8E-06 45.5 10.9 98 150-257 30-158 (223)
206 COG2264 PrmA Ribosomal protein 96.1 0.068 1.5E-06 47.7 10.3 101 153-261 159-266 (300)
207 PF00670 AdoHcyase_NAD: S-aden 96.1 0.078 1.7E-06 42.9 9.7 90 154-258 20-110 (162)
208 PRK12828 short chain dehydroge 96.1 0.044 9.5E-07 47.2 9.1 78 157-236 7-92 (239)
209 PRK07814 short chain dehydroge 96.1 0.043 9.3E-07 48.4 9.2 78 156-235 9-96 (263)
210 TIGR03325 BphB_TodD cis-2,3-di 96.0 0.044 9.6E-07 48.2 9.2 78 156-235 4-88 (262)
211 PRK07806 short chain dehydroge 96.0 0.11 2.5E-06 45.0 11.6 100 157-259 6-135 (248)
212 PRK12549 shikimate 5-dehydroge 96.0 0.061 1.3E-06 48.2 9.8 42 156-197 126-167 (284)
213 PRK12550 shikimate 5-dehydroge 96.0 0.062 1.4E-06 47.7 9.7 69 153-235 118-187 (272)
214 PLN02780 ketoreductase/ oxidor 96.0 0.056 1.2E-06 49.3 9.8 79 156-235 52-141 (320)
215 PF06325 PrmA: Ribosomal prote 96.0 0.016 3.4E-07 52.0 5.9 97 154-262 159-263 (295)
216 PRK04457 spermidine synthase; 96.0 0.1 2.2E-06 46.1 11.0 97 155-257 65-176 (262)
217 PRK06180 short chain dehydroge 96.0 0.051 1.1E-06 48.3 9.2 78 157-236 4-88 (277)
218 PRK06841 short chain dehydroge 95.9 0.048 1E-06 47.7 8.9 79 156-236 14-99 (255)
219 PRK07831 short chain dehydroge 95.9 0.059 1.3E-06 47.4 9.6 81 154-236 14-107 (262)
220 PRK06200 2,3-dihydroxy-2,3-dih 95.9 0.058 1.2E-06 47.5 9.4 78 156-235 5-89 (263)
221 cd01080 NAD_bind_m-THF_DH_Cycl 95.9 0.09 1.9E-06 43.1 9.7 97 135-261 22-119 (168)
222 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.065 1.4E-06 46.6 9.6 78 156-235 4-91 (253)
223 PF13241 NAD_binding_7: Putati 95.9 0.019 4E-07 43.0 5.2 91 156-263 6-96 (103)
224 COG2910 Putative NADH-flavin r 95.9 0.066 1.4E-06 43.9 8.6 93 159-261 2-107 (211)
225 PRK07825 short chain dehydroge 95.9 0.067 1.4E-06 47.4 9.6 78 157-236 5-88 (273)
226 PRK07502 cyclohexadienyl dehyd 95.9 0.079 1.7E-06 48.0 10.2 91 158-259 7-101 (307)
227 COG0169 AroE Shikimate 5-dehyd 95.9 0.027 5.9E-07 50.1 6.9 44 156-199 125-168 (283)
228 PRK09291 short chain dehydroge 95.8 0.059 1.3E-06 47.1 9.0 73 157-235 2-82 (257)
229 cd01065 NAD_bind_Shikimate_DH 95.8 0.078 1.7E-06 42.6 9.0 74 155-237 17-92 (155)
230 PRK12829 short chain dehydroge 95.8 0.059 1.3E-06 47.3 8.9 80 155-236 9-96 (264)
231 PRK12809 putative oxidoreducta 95.8 0.048 1E-06 54.7 9.2 76 156-237 309-406 (639)
232 TIGR01809 Shik-DH-AROM shikima 95.8 0.037 8.1E-07 49.5 7.6 75 156-236 124-200 (282)
233 PRK11207 tellurite resistance 95.8 0.046 9.9E-07 46.1 7.7 98 150-258 24-134 (197)
234 PRK00258 aroE shikimate 5-dehy 95.8 0.058 1.3E-06 48.2 8.7 96 155-259 121-222 (278)
235 PRK01581 speE spermidine synth 95.8 0.16 3.5E-06 46.7 11.5 98 156-259 150-269 (374)
236 PRK07231 fabG 3-ketoacyl-(acyl 95.7 0.054 1.2E-06 47.1 8.3 79 156-236 4-91 (251)
237 PRK05867 short chain dehydroge 95.7 0.071 1.5E-06 46.6 9.0 79 156-236 8-96 (253)
238 cd01075 NAD_bind_Leu_Phe_Val_D 95.7 0.11 2.5E-06 43.8 9.8 81 156-249 27-108 (200)
239 PLN02781 Probable caffeoyl-CoA 95.7 0.11 2.4E-06 45.1 9.9 105 150-258 62-178 (234)
240 PRK09072 short chain dehydroge 95.7 0.097 2.1E-06 46.0 9.7 79 156-236 4-90 (263)
241 PRK05866 short chain dehydroge 95.7 0.096 2.1E-06 47.1 9.8 78 157-236 40-127 (293)
242 PRK08703 short chain dehydroge 95.6 0.11 2.3E-06 45.0 9.8 80 156-236 5-97 (239)
243 PRK07774 short chain dehydroge 95.6 0.09 1.9E-06 45.7 9.4 79 156-236 5-93 (250)
244 PLN02476 O-methyltransferase 95.6 0.095 2.1E-06 46.5 9.3 105 150-258 112-228 (278)
245 PRK08628 short chain dehydroge 95.6 0.082 1.8E-06 46.3 9.0 79 156-236 6-93 (258)
246 cd01078 NAD_bind_H4MPT_DH NADP 95.6 0.13 2.9E-06 43.1 9.8 76 156-238 27-109 (194)
247 cd05311 NAD_bind_2_malic_enz N 95.6 0.18 4E-06 43.5 10.8 91 155-257 23-127 (226)
248 PRK06463 fabG 3-ketoacyl-(acyl 95.6 0.096 2.1E-06 45.8 9.4 78 157-236 7-89 (255)
249 PF03435 Saccharop_dh: Sacchar 95.6 0.089 1.9E-06 49.3 9.6 91 160-257 1-97 (386)
250 PF03446 NAD_binding_2: NAD bi 95.6 0.32 6.9E-06 39.6 11.8 88 159-260 3-96 (163)
251 PRK08339 short chain dehydroge 95.6 0.11 2.3E-06 45.9 9.6 79 156-236 7-95 (263)
252 PRK05884 short chain dehydroge 95.6 0.11 2.5E-06 44.5 9.6 74 159-235 2-78 (223)
253 COG0373 HemA Glutamyl-tRNA red 95.6 0.1 2.2E-06 48.9 9.6 95 156-260 177-276 (414)
254 PRK15116 sulfur acceptor prote 95.6 0.31 6.7E-06 43.1 12.3 104 156-261 29-156 (268)
255 PRK14175 bifunctional 5,10-met 95.5 0.14 3E-06 45.7 10.0 95 136-261 137-233 (286)
256 PRK06198 short chain dehydroge 95.5 0.1 2.3E-06 45.7 9.3 80 156-236 5-94 (260)
257 PRK08300 acetaldehyde dehydrog 95.5 0.18 3.9E-06 45.3 10.7 94 158-259 5-101 (302)
258 COG0031 CysK Cysteine synthase 95.5 0.56 1.2E-05 42.0 13.6 60 149-209 54-116 (300)
259 CHL00194 ycf39 Ycf39; Provisio 95.5 0.1 2.2E-06 47.4 9.5 70 159-235 2-73 (317)
260 TIGR01832 kduD 2-deoxy-D-gluco 95.5 0.13 2.8E-06 44.7 9.8 79 156-236 4-90 (248)
261 PF02254 TrkA_N: TrkA-N domain 95.5 0.5 1.1E-05 35.7 11.9 92 160-257 1-95 (116)
262 COG1179 Dinucleotide-utilizing 95.4 0.2 4.4E-06 43.0 10.1 105 156-261 29-156 (263)
263 PRK06718 precorrin-2 dehydroge 95.4 0.54 1.2E-05 39.8 13.0 99 156-267 9-109 (202)
264 PRK07478 short chain dehydroge 95.4 0.12 2.5E-06 45.3 9.3 78 157-236 6-93 (254)
265 PRK06196 oxidoreductase; Provi 95.4 0.13 2.8E-06 46.7 9.8 78 156-235 25-108 (315)
266 PRK06483 dihydromonapterin red 95.4 0.15 3.3E-06 44.0 9.8 78 157-236 2-84 (236)
267 PRK06500 short chain dehydroge 95.4 0.13 2.7E-06 44.7 9.4 79 156-236 5-90 (249)
268 COG0686 Ald Alanine dehydrogen 95.4 0.074 1.6E-06 47.3 7.5 98 156-260 167-270 (371)
269 PRK07024 short chain dehydroge 95.3 0.13 2.9E-06 45.0 9.5 77 157-235 2-87 (257)
270 PRK08317 hypothetical protein; 95.3 0.099 2.1E-06 45.1 8.5 105 149-259 12-125 (241)
271 PRK12769 putative oxidoreducta 95.3 0.084 1.8E-06 53.2 9.1 75 156-236 326-422 (654)
272 PRK08265 short chain dehydroge 95.3 0.13 2.8E-06 45.3 9.3 79 156-236 5-90 (261)
273 PRK06482 short chain dehydroge 95.3 0.13 2.8E-06 45.6 9.4 77 158-236 3-86 (276)
274 PRK05653 fabG 3-ketoacyl-(acyl 95.3 0.16 3.5E-06 43.8 9.8 78 157-236 5-92 (246)
275 PRK07454 short chain dehydroge 95.3 0.18 3.8E-06 43.7 10.0 79 156-236 5-93 (241)
276 PRK07062 short chain dehydroge 95.3 0.11 2.4E-06 45.7 8.8 79 156-236 7-97 (265)
277 PRK08267 short chain dehydroge 95.3 0.16 3.5E-06 44.5 9.8 77 158-236 2-87 (260)
278 cd00755 YgdL_like Family of ac 95.3 0.31 6.7E-06 42.2 11.1 35 157-191 11-45 (231)
279 PRK08618 ornithine cyclodeamin 95.3 0.24 5.1E-06 45.3 11.1 94 155-261 125-224 (325)
280 PRK12475 thiamine/molybdopteri 95.3 0.15 3.2E-06 46.9 9.7 35 157-191 24-58 (338)
281 PRK06179 short chain dehydroge 95.3 0.08 1.7E-06 46.8 7.8 76 157-236 4-83 (270)
282 PRK07677 short chain dehydroge 95.3 0.13 2.9E-06 44.9 9.1 77 157-235 1-87 (252)
283 PRK12939 short chain dehydroge 95.2 0.19 4.1E-06 43.6 10.1 79 156-236 6-94 (250)
284 TIGR00477 tehB tellurite resis 95.2 0.11 2.4E-06 43.7 8.2 99 149-258 23-133 (195)
285 PLN02823 spermine synthase 95.2 0.19 4.1E-06 46.0 10.3 99 157-258 104-220 (336)
286 PRK06719 precorrin-2 dehydroge 95.2 0.26 5.5E-06 40.0 10.0 82 156-249 12-93 (157)
287 PRK08862 short chain dehydroge 95.2 0.24 5.3E-06 42.6 10.6 79 156-235 4-92 (227)
288 PRK07890 short chain dehydroge 95.2 0.14 3E-06 44.7 9.3 79 156-236 4-92 (258)
289 TIGR03840 TMPT_Se_Te thiopurin 95.2 0.27 5.8E-06 42.0 10.6 102 154-259 32-153 (213)
290 PRK07904 short chain dehydroge 95.2 0.18 3.9E-06 44.2 9.8 81 154-236 5-97 (253)
291 PRK06172 short chain dehydroge 95.2 0.15 3.2E-06 44.5 9.2 79 156-236 6-94 (253)
292 TIGR02355 moeB molybdopterin s 95.2 0.17 3.8E-06 44.0 9.4 35 157-191 24-58 (240)
293 PRK08589 short chain dehydroge 95.2 0.14 3E-06 45.4 9.1 79 156-236 5-92 (272)
294 cd01483 E1_enzyme_family Super 95.2 0.29 6.3E-06 38.8 10.1 32 159-190 1-32 (143)
295 PRK06505 enoyl-(acyl carrier p 95.2 0.16 3.4E-06 45.1 9.4 78 156-235 6-94 (271)
296 PRK07523 gluconate 5-dehydroge 95.2 0.12 2.6E-06 45.2 8.6 79 156-236 9-97 (255)
297 PRK08264 short chain dehydroge 95.1 0.1 2.3E-06 45.0 8.0 75 156-236 5-83 (238)
298 PRK13394 3-hydroxybutyrate deh 95.1 0.16 3.4E-06 44.5 9.3 79 156-236 6-94 (262)
299 PRK07533 enoyl-(acyl carrier p 95.1 0.19 4.2E-06 44.1 9.8 78 156-235 9-97 (258)
300 PRK07109 short chain dehydroge 95.1 0.14 3.1E-06 46.9 9.3 79 156-236 7-95 (334)
301 KOG1252 Cystathionine beta-syn 95.1 0.19 4.2E-06 45.1 9.5 57 149-206 95-155 (362)
302 PRK06181 short chain dehydroge 95.1 0.16 3.4E-06 44.6 9.2 77 158-236 2-88 (263)
303 PRK07688 thiamine/molybdopteri 95.1 0.16 3.4E-06 46.7 9.4 34 157-190 24-57 (339)
304 PRK05854 short chain dehydroge 95.1 0.17 3.7E-06 45.9 9.6 78 156-235 13-102 (313)
305 PRK06194 hypothetical protein; 95.1 0.15 3.2E-06 45.5 9.1 78 157-236 6-93 (287)
306 PRK07832 short chain dehydroge 95.1 0.14 3E-06 45.3 8.9 76 159-236 2-88 (272)
307 PRK08644 thiamine biosynthesis 95.1 0.2 4.3E-06 42.8 9.3 35 156-190 27-61 (212)
308 PRK10538 malonic semialdehyde 95.1 0.16 3.5E-06 44.2 9.0 76 159-236 2-84 (248)
309 PRK06138 short chain dehydroge 95.0 0.16 3.4E-06 44.2 8.9 78 157-236 5-91 (252)
310 PF03807 F420_oxidored: NADP o 95.0 0.9 2E-05 33.0 11.7 76 159-247 1-81 (96)
311 PRK08213 gluconate 5-dehydroge 95.0 0.19 4.1E-06 44.1 9.4 79 156-236 11-99 (259)
312 PRK08226 short chain dehydroge 95.0 0.18 4E-06 44.2 9.3 78 156-235 5-91 (263)
313 COG0421 SpeE Spermidine syntha 95.0 0.36 7.8E-06 43.0 11.0 97 158-257 78-189 (282)
314 KOG0725 Reductases with broad 95.0 0.17 3.7E-06 44.9 9.0 80 156-236 7-99 (270)
315 PRK00312 pcm protein-L-isoaspa 95.0 0.14 3.1E-06 43.6 8.3 101 149-258 71-175 (212)
316 PRK07067 sorbitol dehydrogenas 95.0 0.19 4.2E-06 43.9 9.4 77 157-235 6-89 (257)
317 PF02670 DXP_reductoisom: 1-de 95.0 0.24 5.3E-06 38.5 8.7 95 160-256 1-119 (129)
318 PRK07856 short chain dehydroge 95.0 0.13 2.8E-06 44.9 8.2 74 156-235 5-84 (252)
319 TIGR03215 ac_ald_DH_ac acetald 94.9 0.38 8.3E-06 42.9 11.0 90 159-259 3-95 (285)
320 PRK12823 benD 1,6-dihydroxycyc 94.9 0.15 3.2E-06 44.7 8.5 78 156-235 7-93 (260)
321 PRK07576 short chain dehydroge 94.9 0.23 4.9E-06 43.8 9.7 78 156-235 8-95 (264)
322 PRK08643 acetoin reductase; Va 94.9 0.19 4.1E-06 43.9 9.1 78 157-236 2-89 (256)
323 PRK07574 formate dehydrogenase 94.9 0.18 3.9E-06 47.1 9.2 89 156-258 191-284 (385)
324 PRK07453 protochlorophyllide o 94.9 0.19 4.1E-06 45.8 9.4 78 156-235 5-92 (322)
325 PRK07063 short chain dehydroge 94.9 0.19 4.1E-06 44.1 9.1 79 156-236 6-96 (260)
326 PRK06125 short chain dehydroge 94.9 0.31 6.8E-06 42.7 10.5 77 156-236 6-91 (259)
327 PLN02253 xanthoxin dehydrogena 94.9 0.17 3.8E-06 44.9 8.9 78 157-236 18-104 (280)
328 PRK07074 short chain dehydroge 94.9 0.23 4.9E-06 43.5 9.5 78 157-236 2-87 (257)
329 PRK12548 shikimate 5-dehydroge 94.9 0.27 5.8E-06 44.2 10.0 36 156-191 125-160 (289)
330 COG3288 PntA NAD/NADP transhyd 94.9 0.48 1E-05 42.2 11.0 131 152-284 159-309 (356)
331 KOG1201 Hydroxysteroid 17-beta 94.9 0.12 2.5E-06 45.9 7.4 78 156-235 37-123 (300)
332 PRK05875 short chain dehydroge 94.9 0.21 4.6E-06 44.2 9.4 77 157-235 7-95 (276)
333 PRK06128 oxidoreductase; Provi 94.9 0.47 1E-05 42.7 11.7 78 156-235 54-143 (300)
334 PRK12367 short chain dehydroge 94.8 0.21 4.6E-06 43.7 9.1 72 157-236 14-89 (245)
335 PRK07035 short chain dehydroge 94.8 0.21 4.6E-06 43.5 9.2 77 157-235 8-94 (252)
336 PRK09186 flagellin modificatio 94.8 0.2 4.3E-06 43.7 9.0 78 156-235 3-92 (256)
337 PRK12481 2-deoxy-D-gluconate 3 94.8 0.2 4.4E-06 43.8 9.0 79 156-236 7-93 (251)
338 PF01596 Methyltransf_3: O-met 94.8 0.055 1.2E-06 45.9 5.1 101 154-258 43-155 (205)
339 PRK05690 molybdopterin biosynt 94.8 0.28 6.1E-06 42.9 9.7 36 156-191 31-66 (245)
340 PRK05717 oxidoreductase; Valid 94.8 0.23 5E-06 43.4 9.4 79 156-236 9-94 (255)
341 PRK06914 short chain dehydroge 94.8 0.25 5.5E-06 43.8 9.8 77 157-236 3-91 (280)
342 PF00899 ThiF: ThiF family; I 94.8 0.14 3.1E-06 40.2 7.2 35 157-191 2-36 (135)
343 PRK08219 short chain dehydroge 94.8 0.32 6.9E-06 41.5 10.0 72 158-236 4-81 (227)
344 PRK14192 bifunctional 5,10-met 94.8 0.28 6.1E-06 43.8 9.8 77 155-261 157-234 (283)
345 PRK06101 short chain dehydroge 94.8 0.21 4.6E-06 43.3 9.0 75 158-235 2-80 (240)
346 PRK08340 glucose-1-dehydrogena 94.8 0.26 5.7E-06 43.2 9.6 76 159-236 2-86 (259)
347 PLN03075 nicotianamine synthas 94.8 0.24 5.2E-06 44.3 9.2 97 156-258 123-233 (296)
348 PRK06079 enoyl-(acyl carrier p 94.8 0.23 5E-06 43.4 9.3 78 156-235 6-92 (252)
349 TIGR00507 aroE shikimate 5-deh 94.7 0.24 5.3E-06 44.0 9.4 93 155-260 115-216 (270)
350 COG2227 UbiG 2-polyprenyl-3-me 94.7 0.31 6.7E-06 41.9 9.4 97 155-259 58-162 (243)
351 PRK08251 short chain dehydroge 94.7 0.23 5.1E-06 43.1 9.2 77 157-235 2-90 (248)
352 PRK01683 trans-aconitate 2-met 94.7 0.22 4.9E-06 43.7 9.0 100 149-258 24-130 (258)
353 PRK12429 3-hydroxybutyrate deh 94.7 0.2 4.4E-06 43.6 8.8 77 157-235 4-90 (258)
354 PRK14103 trans-aconitate 2-met 94.7 0.49 1.1E-05 41.5 11.1 96 149-257 22-125 (255)
355 PLN02589 caffeoyl-CoA O-methyl 94.7 0.3 6.5E-06 42.7 9.5 101 152-256 75-188 (247)
356 PRK06114 short chain dehydroge 94.7 0.27 5.9E-06 43.0 9.5 79 156-236 7-96 (254)
357 PRK05876 short chain dehydroge 94.7 0.23 5.1E-06 44.1 9.1 78 156-235 5-92 (275)
358 PRK06197 short chain dehydroge 94.7 0.23 5E-06 44.8 9.2 78 156-235 15-104 (306)
359 PRK07577 short chain dehydroge 94.7 0.17 3.7E-06 43.4 8.1 73 157-236 3-78 (234)
360 PRK08277 D-mannonate oxidoredu 94.7 0.25 5.3E-06 43.9 9.3 78 156-235 9-96 (278)
361 PRK12384 sorbitol-6-phosphate 94.6 0.31 6.7E-06 42.6 9.8 77 157-235 2-90 (259)
362 PRK06124 gluconate 5-dehydroge 94.6 0.3 6.5E-06 42.7 9.6 79 156-236 10-98 (256)
363 PRK09242 tropinone reductase; 94.6 0.24 5.2E-06 43.3 9.0 79 156-236 8-98 (257)
364 cd00757 ThiF_MoeB_HesA_family 94.6 0.43 9.3E-06 41.2 10.4 34 157-190 21-54 (228)
365 PRK08762 molybdopterin biosynt 94.6 0.2 4.4E-06 46.8 8.9 35 156-190 134-168 (376)
366 PRK08328 hypothetical protein; 94.6 0.3 6.4E-06 42.3 9.3 34 157-190 27-60 (231)
367 PRK12936 3-ketoacyl-(acyl-carr 94.6 0.29 6.2E-06 42.3 9.4 79 156-236 5-90 (245)
368 PRK07102 short chain dehydroge 94.6 0.34 7.3E-06 42.0 9.8 38 158-196 2-40 (243)
369 cd01487 E1_ThiF_like E1_ThiF_l 94.6 0.25 5.5E-06 40.7 8.5 33 159-191 1-33 (174)
370 TIGR00563 rsmB ribosomal RNA s 94.6 0.33 7.2E-06 46.2 10.4 104 150-260 232-370 (426)
371 PRK06398 aldose dehydrogenase; 94.6 0.15 3.2E-06 44.8 7.6 73 156-235 5-81 (258)
372 PRK05562 precorrin-2 dehydroge 94.5 1.6 3.5E-05 37.4 13.4 115 156-282 24-140 (223)
373 PF01408 GFO_IDH_MocA: Oxidore 94.5 1.2 2.7E-05 33.7 11.8 88 159-258 2-92 (120)
374 PRK06603 enoyl-(acyl carrier p 94.5 0.28 6.1E-06 43.2 9.2 78 156-235 7-95 (260)
375 PRK07666 fabG 3-ketoacyl-(acyl 94.5 0.28 6E-06 42.4 9.1 78 157-236 7-94 (239)
376 PF00106 adh_short: short chai 94.5 0.35 7.6E-06 39.0 9.2 77 159-236 2-90 (167)
377 PRK10258 biotin biosynthesis p 94.5 0.83 1.8E-05 40.0 12.1 99 152-261 38-143 (251)
378 TIGR02622 CDP_4_6_dhtase CDP-g 94.5 0.12 2.6E-06 47.7 7.1 74 156-235 3-84 (349)
379 TIGR00417 speE spermidine synt 94.5 0.35 7.5E-06 43.0 9.7 97 157-258 73-186 (270)
380 PRK01438 murD UDP-N-acetylmura 94.5 0.36 7.9E-06 46.7 10.7 69 156-236 15-88 (480)
381 TIGR03206 benzo_BadH 2-hydroxy 94.5 0.33 7.2E-06 42.1 9.6 78 156-235 2-89 (250)
382 PRK08263 short chain dehydroge 94.5 0.29 6.4E-06 43.3 9.3 78 157-236 3-87 (275)
383 PRK07340 ornithine cyclodeamin 94.5 0.22 4.7E-06 45.1 8.5 93 155-261 123-220 (304)
384 PRK10669 putative cation:proto 94.5 0.29 6.3E-06 48.3 10.1 75 158-237 418-492 (558)
385 PRK08085 gluconate 5-dehydroge 94.4 0.34 7.3E-06 42.3 9.5 79 156-236 8-96 (254)
386 PLN02244 tocopherol O-methyltr 94.4 0.23 4.9E-06 45.8 8.7 98 155-259 117-224 (340)
387 KOG1014 17 beta-hydroxysteroid 94.4 0.34 7.3E-06 43.2 9.2 79 155-236 47-136 (312)
388 PF01113 DapB_N: Dihydrodipico 94.4 0.3 6.5E-06 37.8 8.1 92 159-261 2-100 (124)
389 PRK08287 cobalt-precorrin-6Y C 94.4 0.22 4.7E-06 41.5 7.8 101 149-258 24-131 (187)
390 PF02558 ApbA: Ketopantoate re 94.4 0.028 6E-07 45.1 2.3 94 160-258 1-101 (151)
391 PLN03139 formate dehydrogenase 94.4 0.25 5.5E-06 46.1 8.8 46 156-202 198-243 (386)
392 PRK12826 3-ketoacyl-(acyl-carr 94.4 0.3 6.5E-06 42.3 9.0 78 157-236 6-93 (251)
393 PRK11036 putative S-adenosyl-L 94.3 0.68 1.5E-05 40.7 11.2 97 155-258 43-149 (255)
394 PRK06935 2-deoxy-D-gluconate 3 94.3 0.31 6.8E-06 42.6 9.1 79 156-236 14-101 (258)
395 COG1648 CysG Siroheme synthase 94.3 0.55 1.2E-05 40.0 10.1 115 156-282 11-127 (210)
396 PTZ00098 phosphoethanolamine N 94.3 0.52 1.1E-05 41.7 10.4 106 148-260 44-158 (263)
397 TIGR01505 tartro_sem_red 2-hyd 94.3 0.33 7.1E-06 43.6 9.3 70 159-241 1-70 (291)
398 PRK08415 enoyl-(acyl carrier p 94.3 0.36 7.7E-06 42.9 9.4 78 157-236 5-93 (274)
399 PLN02657 3,8-divinyl protochlo 94.3 0.4 8.8E-06 45.0 10.2 81 153-236 56-146 (390)
400 TIGR02354 thiF_fam2 thiamine b 94.3 0.49 1.1E-05 40.0 9.7 34 157-190 21-54 (200)
401 PRK08690 enoyl-(acyl carrier p 94.2 0.37 8E-06 42.4 9.3 79 156-236 5-94 (261)
402 TIGR01963 PHB_DH 3-hydroxybuty 94.2 0.34 7.3E-06 42.2 9.0 77 158-236 2-88 (255)
403 PRK11559 garR tartronate semia 94.2 0.4 8.7E-06 43.1 9.6 70 159-241 4-73 (296)
404 PLN02233 ubiquinone biosynthes 94.2 0.75 1.6E-05 40.6 11.1 104 150-262 67-186 (261)
405 PF01210 NAD_Gly3P_dh_N: NAD-d 94.1 0.57 1.2E-05 37.9 9.5 84 159-249 1-91 (157)
406 PF07991 IlvN: Acetohydroxy ac 94.1 0.94 2E-05 36.6 10.4 87 156-256 3-93 (165)
407 PRK00121 trmB tRNA (guanine-N( 94.1 0.78 1.7E-05 38.8 10.8 98 156-258 40-156 (202)
408 PRK06484 short chain dehydroge 94.1 0.29 6.2E-06 47.8 9.2 79 156-236 4-89 (520)
409 PRK07985 oxidoreductase; Provi 94.1 0.84 1.8E-05 41.0 11.6 78 156-235 48-137 (294)
410 PRK14188 bifunctional 5,10-met 94.1 0.46 9.9E-06 42.6 9.6 94 136-261 137-233 (296)
411 TIGR00138 gidB 16S rRNA methyl 94.1 0.38 8.1E-06 40.0 8.6 94 156-257 42-141 (181)
412 PRK06720 hypothetical protein; 94.1 0.5 1.1E-05 38.8 9.2 38 156-194 15-53 (169)
413 PRK08993 2-deoxy-D-gluconate 3 94.1 0.43 9.4E-06 41.7 9.5 78 157-236 10-95 (253)
414 PRK04266 fibrillarin; Provisio 94.1 0.77 1.7E-05 39.6 10.7 102 150-257 66-175 (226)
415 KOG4022 Dihydropteridine reduc 94.0 0.7 1.5E-05 37.2 9.3 96 158-260 4-131 (236)
416 PLN00203 glutamyl-tRNA reducta 94.0 0.2 4.4E-06 48.6 7.6 73 157-238 266-341 (519)
417 TIGR00872 gnd_rel 6-phosphoglu 94.0 0.37 7.9E-06 43.5 8.9 44 159-203 2-45 (298)
418 PRK07417 arogenate dehydrogena 94.0 0.49 1.1E-05 42.3 9.7 66 159-236 2-67 (279)
419 PRK13243 glyoxylate reductase; 94.0 0.73 1.6E-05 42.3 10.9 87 156-258 149-240 (333)
420 PLN02256 arogenate dehydrogena 94.0 0.58 1.3E-05 42.3 10.1 49 153-203 32-80 (304)
421 PRK06113 7-alpha-hydroxysteroi 94.0 0.43 9.3E-06 41.7 9.2 79 156-236 10-98 (255)
422 cd01492 Aos1_SUMO Ubiquitin ac 94.0 0.68 1.5E-05 39.0 9.9 34 157-190 21-54 (197)
423 PRK15469 ghrA bifunctional gly 93.9 0.48 1E-05 43.0 9.6 88 156-259 135-227 (312)
424 COG0673 MviM Predicted dehydro 93.9 0.65 1.4E-05 42.5 10.7 134 159-306 5-146 (342)
425 PRK07097 gluconate 5-dehydroge 93.9 0.48 1E-05 41.7 9.4 79 156-236 9-97 (265)
426 PRK06077 fabG 3-ketoacyl-(acyl 93.9 1.3 2.9E-05 38.3 12.1 77 157-235 6-93 (252)
427 PF10727 Rossmann-like: Rossma 93.9 0.15 3.3E-06 39.6 5.4 79 157-249 10-90 (127)
428 TIGR02752 MenG_heptapren 2-hep 93.9 0.33 7.1E-06 41.8 8.1 104 149-259 38-152 (231)
429 PRK14618 NAD(P)H-dependent gly 93.9 0.69 1.5E-05 42.3 10.6 90 159-258 6-104 (328)
430 COG0569 TrkA K+ transport syst 93.8 0.53 1.2E-05 40.6 9.3 74 159-237 2-77 (225)
431 PRK06523 short chain dehydroge 93.8 0.29 6.3E-06 42.9 7.9 75 156-235 8-86 (260)
432 PRK08063 enoyl-(acyl carrier p 93.8 0.42 9.1E-06 41.5 8.9 78 156-235 3-91 (250)
433 PRK03562 glutathione-regulated 93.8 0.42 9.2E-06 47.8 9.8 77 157-238 400-476 (621)
434 PRK11933 yebU rRNA (cytosine-C 93.8 0.9 1.9E-05 43.7 11.6 102 153-260 110-244 (470)
435 TIGR01532 E4PD_g-proteo D-eryt 93.8 0.58 1.2E-05 42.7 9.8 100 159-260 1-122 (325)
436 PRK12938 acetyacetyl-CoA reduc 93.8 0.43 9.3E-06 41.3 8.9 78 157-236 3-91 (246)
437 PLN02490 MPBQ/MSBQ methyltrans 93.8 0.45 9.8E-06 43.6 9.2 99 155-259 112-216 (340)
438 PRK08278 short chain dehydroge 93.8 0.39 8.4E-06 42.6 8.7 36 156-192 5-41 (273)
439 PRK05447 1-deoxy-D-xylulose 5- 93.8 0.81 1.7E-05 42.5 10.7 97 158-256 2-120 (385)
440 PRK05597 molybdopterin biosynt 93.8 0.42 9.1E-06 44.3 9.1 35 157-191 28-62 (355)
441 COG2084 MmsB 3-hydroxyisobutyr 93.8 0.61 1.3E-05 41.6 9.6 88 159-260 2-97 (286)
442 PRK05650 short chain dehydroge 93.8 0.41 8.9E-06 42.2 8.8 76 159-236 2-87 (270)
443 PRK06484 short chain dehydroge 93.7 0.5 1.1E-05 46.1 10.1 79 156-236 268-353 (520)
444 PLN03013 cysteine synthase 93.7 1.3 2.8E-05 42.0 12.3 57 150-206 167-226 (429)
445 PRK14903 16S rRNA methyltransf 93.7 1 2.2E-05 42.9 11.8 105 150-260 231-368 (431)
446 PRK08945 putative oxoacyl-(acy 93.7 0.67 1.4E-05 40.2 10.0 42 153-195 8-50 (247)
447 PRK14194 bifunctional 5,10-met 93.7 0.61 1.3E-05 41.9 9.6 94 136-260 138-233 (301)
448 PRK08159 enoyl-(acyl carrier p 93.7 0.58 1.2E-05 41.5 9.6 78 156-235 9-97 (272)
449 PRK13255 thiopurine S-methyltr 93.7 0.76 1.6E-05 39.4 9.9 101 153-257 34-154 (218)
450 PLN00141 Tic62-NAD(P)-related 93.7 0.43 9.3E-06 41.7 8.7 76 156-236 16-95 (251)
451 PRK11579 putative oxidoreducta 93.7 0.94 2E-05 41.8 11.3 131 159-305 6-142 (346)
452 PRK00216 ubiE ubiquinone/menaq 93.6 0.41 9E-06 41.2 8.4 105 150-260 45-160 (239)
453 PRK12743 oxidoreductase; Provi 93.6 0.53 1.1E-05 41.2 9.1 78 157-236 2-90 (256)
454 PRK14027 quinate/shikimate deh 93.6 0.32 6.9E-06 43.5 7.6 43 156-198 126-168 (283)
455 PF02719 Polysacc_synt_2: Poly 93.6 0.45 9.8E-06 42.5 8.4 75 160-236 1-87 (293)
456 PRK05600 thiamine biosynthesis 93.5 0.61 1.3E-05 43.4 9.7 35 156-190 40-74 (370)
457 PF05368 NmrA: NmrA-like famil 93.5 0.47 1E-05 40.9 8.5 69 160-235 1-73 (233)
458 PRK09599 6-phosphogluconate de 93.5 0.63 1.4E-05 42.0 9.7 44 159-203 2-45 (301)
459 PRK06522 2-dehydropantoate 2-r 93.5 0.56 1.2E-05 42.2 9.4 43 159-202 2-44 (304)
460 PRK07066 3-hydroxybutyryl-CoA 93.5 2.2 4.7E-05 38.9 13.0 38 158-196 8-45 (321)
461 PRK07984 enoyl-(acyl carrier p 93.5 0.64 1.4E-05 41.0 9.5 78 156-235 5-93 (262)
462 PRK07424 bifunctional sterol d 93.5 0.49 1.1E-05 44.6 9.1 74 156-236 177-255 (406)
463 PRK13984 putative oxidoreducta 93.5 0.46 1E-05 47.4 9.5 77 154-236 280-378 (604)
464 PF01564 Spermine_synth: Sperm 93.5 0.2 4.4E-06 43.8 6.1 95 156-258 76-191 (246)
465 COG4106 Tam Trans-aconitate me 93.5 0.42 9.1E-06 40.4 7.5 96 152-257 26-128 (257)
466 KOG1210 Predicted 3-ketosphing 93.4 0.44 9.5E-06 42.6 8.0 83 153-236 29-122 (331)
467 PRK08642 fabG 3-ketoacyl-(acyl 93.4 0.56 1.2E-05 40.7 9.0 78 157-235 5-90 (253)
468 PF01370 Epimerase: NAD depend 93.4 0.5 1.1E-05 40.4 8.6 71 160-236 1-75 (236)
469 PRK05565 fabG 3-ketoacyl-(acyl 93.4 0.59 1.3E-05 40.3 9.0 78 157-236 5-93 (247)
470 PRK03659 glutathione-regulated 93.4 0.6 1.3E-05 46.5 9.9 94 158-257 401-497 (601)
471 PRK11064 wecC UDP-N-acetyl-D-m 93.3 1.5 3.3E-05 41.6 12.1 73 158-237 4-86 (415)
472 PRK12490 6-phosphogluconate de 93.3 0.61 1.3E-05 42.1 9.2 44 159-203 2-45 (299)
473 PRK13403 ketol-acid reductoiso 93.3 1.2 2.7E-05 40.3 10.8 87 155-256 14-104 (335)
474 PF03721 UDPG_MGDP_dh_N: UDP-g 93.3 1.6 3.5E-05 36.3 11.0 40 159-199 2-41 (185)
475 PRK06171 sorbitol-6-phosphate 93.2 0.35 7.6E-06 42.5 7.4 75 156-235 8-86 (266)
476 PRK09135 pteridine reductase; 93.2 0.7 1.5E-05 39.9 9.3 35 156-191 5-40 (249)
477 COG0144 Sun tRNA and rRNA cyto 93.2 0.66 1.4E-05 43.0 9.4 104 150-260 150-290 (355)
478 PRK12480 D-lactate dehydrogena 93.2 1.2 2.5E-05 40.9 10.8 86 156-259 145-235 (330)
479 PLN02986 cinnamyl-alcohol dehy 93.2 0.61 1.3E-05 42.3 9.1 38 156-194 4-42 (322)
480 PRK07791 short chain dehydroge 93.2 0.76 1.6E-05 41.1 9.5 35 156-191 5-40 (286)
481 PRK12937 short chain dehydroge 93.1 0.76 1.6E-05 39.7 9.3 79 156-236 4-93 (245)
482 PRK05708 2-dehydropantoate 2-r 93.1 0.49 1.1E-05 42.9 8.2 95 159-257 4-103 (305)
483 PRK14902 16S rRNA methyltransf 93.1 0.93 2E-05 43.4 10.5 104 150-259 244-380 (444)
484 cd05211 NAD_bind_Glu_Leu_Phe_V 93.1 0.92 2E-05 38.8 9.5 46 156-201 22-77 (217)
485 PRK10792 bifunctional 5,10-met 93.1 0.79 1.7E-05 40.8 9.2 94 136-260 138-233 (285)
486 PRK06940 short chain dehydroge 93.1 0.83 1.8E-05 40.5 9.6 76 158-236 3-86 (275)
487 PLN02928 oxidoreductase family 93.1 1.1 2.3E-05 41.5 10.5 96 156-259 158-263 (347)
488 COG1052 LdhA Lactate dehydroge 93.0 1.3 2.9E-05 40.3 10.9 88 156-259 145-237 (324)
489 PRK05855 short chain dehydroge 93.0 0.55 1.2E-05 46.3 9.2 79 156-236 314-402 (582)
490 PRK05557 fabG 3-ketoacyl-(acyl 93.0 0.75 1.6E-05 39.6 9.1 78 157-236 5-93 (248)
491 TIGR00715 precor6x_red precorr 93.0 0.33 7.1E-06 42.7 6.7 73 159-236 2-75 (256)
492 PRK03612 spermidine synthase; 93.0 0.85 1.9E-05 44.6 10.2 99 155-258 296-415 (521)
493 PRK08303 short chain dehydroge 93.0 0.82 1.8E-05 41.4 9.6 34 156-190 7-41 (305)
494 TIGR00446 nop2p NOL1/NOP2/sun 93.0 2.9 6.4E-05 36.9 12.8 102 151-259 66-200 (264)
495 cd05191 NAD_bind_amino_acid_DH 92.9 1 2.3E-05 32.2 8.2 35 155-189 21-55 (86)
496 TIGR02415 23BDH acetoin reduct 92.9 0.68 1.5E-05 40.3 8.7 76 159-236 2-87 (254)
497 PRK08594 enoyl-(acyl carrier p 92.9 0.82 1.8E-05 40.1 9.3 78 156-235 6-96 (257)
498 PRK07775 short chain dehydroge 92.9 1.2 2.5E-05 39.5 10.4 78 157-236 10-97 (274)
499 PRK14982 acyl-ACP reductase; P 92.9 0.64 1.4E-05 42.6 8.6 93 156-261 154-249 (340)
500 PRK07792 fabG 3-ketoacyl-(acyl 92.9 0.83 1.8E-05 41.3 9.5 78 156-236 11-99 (306)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=4.5e-59 Score=404.21 Aligned_cols=336 Identities=46% Similarity=0.826 Sum_probs=314.3
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||+.|+|+||.|.....+..+..+|+++|||++|+|++||++|+++++||+|+..+.-+||.|.+|+++.+|+|.....
T Consensus 31 lVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~ 110 (366)
T COG1062 31 LVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRA 110 (366)
T ss_pred EEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhh
Confidence 68999999999998877777777799999999999999999999999999999999999999999999999999999888
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
....|. ..+|.+.++.++...+++.+.++|+||.++++..++++++..+++.++.+.|...|++.+.++.+++++|+++
T Consensus 111 ~~~kG~-m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tv 189 (366)
T COG1062 111 TQGKGT-MPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTV 189 (366)
T ss_pred hccccc-ccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeE
Confidence 877774 4567788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
.|.|.|++|++++|-|+..|+.++|+++.+++|++++++||+++++|..+.. +..+.+.+++++++|++|||+|+.+.+
T Consensus 190 aV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~ 268 (366)
T COG1062 190 AVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVD-DVVEAIVELTDGGADYAFECVGNVEVM 268 (366)
T ss_pred EEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhh-hHHHHHHHhcCCCCCEEEEccCCHHHH
Confidence 9999999999999999999999999999999999999999999999998763 389999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 320 (341)
++++.++.+ ||+.+++|.......+++.+..+..+.++.|++++...++.++.++++++.+|++.+.+++++.++|+||
T Consensus 269 ~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~I 347 (366)
T COG1062 269 RQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDI 347 (366)
T ss_pred HHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHH
Confidence 999999999 5999999988777667666666666799999999998888999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcceEEEec
Q 019414 321 NKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 321 ~ea~~~~~~~~~~k~vl~~ 339 (341)
||||+.|.+++.+|.|+.+
T Consensus 348 Neaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 348 NEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred HHHHHHHhCCceeeEEecC
Confidence 9999999999999998864
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=7.4e-58 Score=405.29 Aligned_cols=303 Identities=31% Similarity=0.508 Sum_probs=265.1
Q ss_pred CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEe-cccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP-VFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++++|+|++|+......+. ..+|+|||||.+|+|+++|++|++|++||||.+ ++..+|++|+||++|++|+|++.
T Consensus 32 lI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~ 111 (339)
T COG1064 32 LIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQ 111 (339)
T ss_pred EEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCc
Confidence 6899999999999665444333 358999999999999999999999999999998 89999999999999999999997
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
+++ +|+ .+|+||||+++|+.+++++|+++++++||.+.|+..|.|++| +.++++||+
T Consensus 112 ~~~------------gy~----------~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~ 168 (339)
T COG1064 112 KIT------------GYT----------TDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGK 168 (339)
T ss_pred ccc------------cee----------ecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCC
Confidence 763 333 446999999999999999999999999999999999999996 559999999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|+|+|.|++|++++|+|+.+|+ +|++++++++|++.++++|++++++.++.+ ..+.+++. +|+++|+++ +.
T Consensus 169 ~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~~~--~~~~~~~~----~d~ii~tv~-~~ 240 (339)
T COG1064 169 WVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSDSD--ALEAVKEI----ADAIIDTVG-PA 240 (339)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCCch--hhHHhHhh----CcEEEECCC-hh
Confidence 99999999999999999999998 999999999999999999999999877443 66666554 999999999 89
Q ss_pred HHHHHHHHhcCCCcEEEEEccCC-CCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
.++++++.|+++ |+++++|... ...........+.+++++.|+..++. .++++++++..++++.+. +.+.+++
T Consensus 241 ~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~--i~e~~~l 314 (339)
T COG1064 241 TLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE--ILETIPL 314 (339)
T ss_pred hHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee--EEeeECH
Confidence 999999999998 9999999874 32221112334678999999998876 789999999999988776 3279999
Q ss_pred CcHHHHHHHHhcCCc-ceEEEecC
Q 019414 318 SEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
+|+++|++.|.+++. +|+|+++.
T Consensus 315 ~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 315 DEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHHHcCCeeeEEEecCC
Confidence 999999999999996 59999875
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-56 Score=381.91 Aligned_cols=338 Identities=52% Similarity=0.925 Sum_probs=318.9
Q ss_pred ccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 2 LSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 2 ~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
||..+.++|+.|........ ...||.|+|||++|+|+.+|++|+++++||+|+..+...|+.|.+|+++..|.|...+.
T Consensus 37 IKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~ 116 (375)
T KOG0022|consen 37 IKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRA 116 (375)
T ss_pred EEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcc
Confidence 67889999999977665553 34589999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
+...+.+..+|.+.|.-.|..++|+.+..+|+||.+++...+.++++..+++.++.|.|.+.|+|.|..+.++++||+++
T Consensus 117 ~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~Gstv 196 (375)
T KOG0022|consen 117 DNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTV 196 (375)
T ss_pred cccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEE
Confidence 98888888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
.|+|-|++|++++|-||..|++++|+++-+++|.+.++++|++..+|+.+......+.++++|++|+|+.|||+|+.+++
T Consensus 197 AVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m 276 (375)
T KOG0022|consen 197 AVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTM 276 (375)
T ss_pred EEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHH
Confidence 99999999999999999999999999999999999999999999999986555688999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 320 (341)
.+++.+..++||+-+.+|.......+.+.+..+.++.++.|+.++.++.+.+++.+.+.+.++++.++.++++.+||+++
T Consensus 277 ~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~I 356 (375)
T KOG0022|consen 277 RAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEI 356 (375)
T ss_pred HHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHH
Confidence 99999999999999999998877778887777889999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcceEEEec
Q 019414 321 NKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 321 ~ea~~~~~~~~~~k~vl~~ 339 (341)
++||+.|.+++.+|.|+.+
T Consensus 357 n~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 357 NKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred HHHHHHHhCCceEEEEEeC
Confidence 9999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-55 Score=375.41 Aligned_cols=313 Identities=27% Similarity=0.449 Sum_probs=271.8
Q ss_pred CccccccCCcCcceeeeccCCCC----CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTP----LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~----~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+|++++.|+|-+|..+...+... +.||++|||.+|+|.++|+.|+++++||||++.|..+|+.|++|++|+||+|.
T Consensus 33 lv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp 112 (354)
T KOG0024|consen 33 LVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCP 112 (354)
T ss_pred EEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCC
Confidence 57899999999996654443332 46999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...+...+- -+|++++|++.+++.+++||+++|++++| |..+++++|||. +++.+++
T Consensus 113 ~m~f~atpp---------------------~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~HAc-r~~~vk~ 169 (354)
T KOG0024|consen 113 HMVFCATPP---------------------VDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVHAC-RRAGVKK 169 (354)
T ss_pred ccccccCCC---------------------cCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhhhh-hhcCccc
Confidence 998853221 13799999999999999999999999965 667899999995 7899999
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC--hhHHHHHHHHhcC-CccEEEec
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNG-GVDRSVEC 233 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~i~~~~~~-~~d~vld~ 233 (341)
|+++||+|+|++|+.+...||.+|+++|+.++-.+.|+++++++|++.+.+....+ ..+.+.+.+..++ .+|+.|||
T Consensus 170 Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dC 249 (354)
T KOG0024|consen 170 GSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDC 249 (354)
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEc
Confidence 99999999999999999999999999999999999999999999998776554433 2344555555554 69999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 313 (341)
+|....++.++..++.+ |++++.++.....+++.... ..+++++.|++.+.. .+++.+++++++|++.+++++|+
T Consensus 250 sG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~fry~~---~~y~~ai~li~sGki~~k~lIT~ 324 (354)
T KOG0024|consen 250 SGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSFRYCN---GDYPTAIELVSSGKIDVKPLITH 324 (354)
T ss_pred cCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeeeeecc---ccHHHHHHHHHcCCcCchhheec
Confidence 99988999999999998 99999998877766766444 568999999875543 58999999999999999999999
Q ss_pred eecCCcHHHHHHHHhcCC--cceEEEecCC
Q 019414 314 RIPFSEINKAFEYMVKGE--GLRCIISMED 341 (341)
Q Consensus 314 ~~~~~~i~ea~~~~~~~~--~~k~vl~~~~ 341 (341)
+|++++..+||+.+..++ .+|++++.++
T Consensus 325 r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 325 RYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred ccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 999999999999998887 4699998764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-51 Score=351.38 Aligned_cols=311 Identities=26% Similarity=0.412 Sum_probs=266.6
Q ss_pred CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEE-EecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V-~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||++++|+|++|+......+. ..+|+|+|||.+|+|+++|++|++|++|||| +.+.+.+|.+|+||+.+++++|+..
T Consensus 40 ~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~ 119 (360)
T KOG0023|consen 40 LVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKM 119 (360)
T ss_pred EEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCce
Confidence 5889999999999765444333 5799999999999999999999999999999 5577889999999999999999975
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.++. .++.+|| ..++|+||+|+++++..++++|++++.+.||.+.|+..|.|.+| ...++.||+
T Consensus 120 ~~t~----------~g~~~DG-----t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~ 183 (360)
T KOG0023|consen 120 HFTY----------NGVYHDG-----TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGK 183 (360)
T ss_pred eEec----------cccccCC-----CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCc
Confidence 5532 3555666 33458999999999999999999999999999999999999995 567888999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCceecCCC-CCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTS-EHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vv~~~-~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
++.|.|+|++|++++|+||++|. +|+++++++ +|.+.++.||++..++.. +++ +.+++.+.+++++|-+.+. +
T Consensus 184 ~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d--~~~~~~~~~dg~~~~v~~~--a 258 (360)
T KOG0023|consen 184 WVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTEDPD--IMKAIMKTTDGGIDTVSNL--A 258 (360)
T ss_pred EEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCCHH--HHHHHHHhhcCcceeeeec--c
Confidence 99999997799999999999999 999998887 777788889999988876 444 8888888887777777766 4
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
...++.++.+++++ |++|++|.......++.. .+..+.+.+.|+.+++. .+.++++++..++.+... .+..+
T Consensus 259 ~~~~~~~~~~lk~~-Gt~V~vg~p~~~~~~~~~-~lil~~~~I~GS~vG~~---ket~E~Ldf~a~~~ik~~---IE~v~ 330 (360)
T KOG0023|consen 259 EHALEPLLGLLKVN-GTLVLVGLPEKPLKLDTF-PLILGRKSIKGSIVGSR---KETQEALDFVARGLIKSP---IELVK 330 (360)
T ss_pred ccchHHHHHHhhcC-CEEEEEeCcCCcccccch-hhhcccEEEEeeccccH---HHHHHHHHHHHcCCCcCc---eEEEe
Confidence 57899999999998 999999998775444443 33668889999998876 689999999999988766 69999
Q ss_pred CCcHHHHHHHHhcCCc-ceEEEecC
Q 019414 317 FSEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
++++++|++.|++++. .|.|++++
T Consensus 331 ~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 331 LSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred hhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 9999999999999996 59998875
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.1e-50 Score=373.05 Aligned_cols=333 Identities=38% Similarity=0.676 Sum_probs=272.9
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||++++++|+.|...........+|.++|||++|+|+++|++++++++||||++.+..+|+.|++|+++++|+|.+...
T Consensus 37 lV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~ 116 (371)
T cd08281 37 LVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAA 116 (371)
T ss_pred EEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccc
Confidence 68999999999996654333334579999999999999999999999999999998888999999999999999988654
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
....|.... +...+..++..+.+..+.|+|+||+.++++.++++|+++++++|+.+++++.|||+++.+..++++|++|
T Consensus 117 ~~~~g~~~~-g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~V 195 (371)
T cd08281 117 ANGAGTLLS-GGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSV 195 (371)
T ss_pred ccccccccc-CcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEE
Confidence 332222111 1111222222222222347999999999999999999999999999999999999998888899999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
||+|+|++|++++|+||..|++.|++++++++|+++++++|++.++++.+.+ +.+.+++.+++++|++|||+|.+..+
T Consensus 196 lV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~ 273 (371)
T cd08281 196 AVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPAL 273 (371)
T ss_pred EEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHH
Confidence 9999999999999999999997799999999999999999999999887655 77888888777899999999988899
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
+.++++++++ |+++.+|.........+.. ..+.+++++.|+....+..++++++++++++++++.+.+++++.|+|+|
T Consensus 274 ~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~ 352 (371)
T cd08281 274 ETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDE 352 (371)
T ss_pred HHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHH
Confidence 9999999998 9999999754322222222 2356889999987655433457899999999999998888999999999
Q ss_pred HHHHHHHHhcCCcceEEE
Q 019414 320 INKAFEYMVKGEGLRCII 337 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl 337 (341)
+++|++.+.+++..|.|+
T Consensus 353 ~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 353 INEGFDRLAAGEAVRQVI 370 (371)
T ss_pred HHHHHHHHhCCCceeeee
Confidence 999999999998875554
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=6e-50 Score=371.95 Aligned_cols=338 Identities=47% Similarity=0.888 Sum_probs=269.7
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
|||++++|+|+.|+....... ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+.+++|+|.+..
T Consensus 30 lI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~ 109 (368)
T TIGR02818 30 LVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVR 109 (368)
T ss_pred EEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcc
Confidence 589999999999965433222 2357899999999999999999999999999999999999999999999999998743
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.....|+. .++..++..+|..+++..+.|+|+||+++|.+.++++|++++++++|.+++++.|||+++.+..++++|++
T Consensus 110 ~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~ 188 (368)
T TIGR02818 110 ETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDT 188 (368)
T ss_pred cccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCE
Confidence 22111111 11111222334333333345899999999999999999999999999999999999999888889999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
|||+|+|++|++++|+||.+|+.+|++++++++|++.++++|++.++++.+.+..+.+.+++.+++++|++|||+|++..
T Consensus 189 VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~ 268 (368)
T TIGR02818 189 VAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNV 268 (368)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHH
Confidence 99999999999999999999997799999999999999999999999877543346677878777789999999998788
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
+.++++++++++|+++.+|.......+......+.++..+.++.........++++++++++++++.+.++++++|+|+|
T Consensus 269 ~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~ 348 (368)
T TIGR02818 269 MRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED 348 (368)
T ss_pred HHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHH
Confidence 99999999873499999997542222222222222344466665443222356899999999999988888999999999
Q ss_pred HHHHHHHHhcCCcceEEEec
Q 019414 320 INKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl~~ 339 (341)
+++|++.+.+++..|++|.+
T Consensus 349 ~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 349 INEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHhCCCceeEEeeC
Confidence 99999999888878999874
No 8
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.2e-49 Score=370.34 Aligned_cols=338 Identities=73% Similarity=1.214 Sum_probs=276.8
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
|||+.++|+|+.|........ ...+|+++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|+|....
T Consensus 31 lIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~ 110 (369)
T cd08301 31 RIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLR 110 (369)
T ss_pred EEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcc
Confidence 589999999999965433222 3467999999999999999999999999999999999999999999999999999865
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.+...++...++...+...|...++....|+|+||+.+++..++++|+++++++++.+++++.|||+++.+..++++|++
T Consensus 111 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~ 190 (369)
T cd08301 111 INTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGST 190 (369)
T ss_pred cccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCE
Confidence 54333332222222222223222223345899999999999999999999999999999999999999888889999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++++.+.+..+.+.+++.+++++|++||++|.+..
T Consensus 191 VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~ 270 (369)
T cd08301 191 VAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDA 270 (369)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHH
Confidence 99999999999999999999987799999999999999999999898876543347777888777789999999998788
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
+..+++++++++|+++.+|.......+++....+.+++++.|+....+..+.+++++++++.++++.+.++++++|+|+|
T Consensus 271 ~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~ 350 (369)
T cd08301 271 MISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSE 350 (369)
T ss_pred HHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHH
Confidence 89999999993389999997654333333333344688999887665544457899999999999988888899999999
Q ss_pred HHHHHHHHhcCCcceEEEe
Q 019414 320 INKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl~ 338 (341)
+++|++.+.+++..|++|+
T Consensus 351 ~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 351 INKAFDLLLKGECLRCILH 369 (369)
T ss_pred HHHHHHHHHCCCceeEEeC
Confidence 9999999999998899874
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.6e-49 Score=370.73 Aligned_cols=339 Identities=49% Similarity=0.938 Sum_probs=272.7
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++++|+|+.|+....... ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++.+|.|++.
T Consensus 39 lV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~ 118 (381)
T PLN02740 39 RIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETY 118 (381)
T ss_pred EEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCc
Confidence 589999999999965433222 235799999999999999999999999999999999999999999999999999986
Q ss_pred cccCcccccccCCCcccccC--CCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 79 RINPVRGVMLADGQSRFSIN--GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...+........+...+... +..+.+....|+|+||++++.+.++++|++++++++|.+++++.|||+++.+..++++
T Consensus 119 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~ 198 (381)
T PLN02740 119 RVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQA 198 (381)
T ss_pred cccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCC
Confidence 54321110000011111110 1111122235899999999999999999999999999999999999998878889999
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+.+.++.+.+++.+++++|++||++|.
T Consensus 199 g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~ 278 (381)
T PLN02740 199 GSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGN 278 (381)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCC
Confidence 99999999999999999999999986799999999999999999999998877543347777888776689999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
+..+..++.++++++|+++.+|.......+++....+.+++++.|+..+.+....+++++++++.++++.+.++++++|+
T Consensus 279 ~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~ 358 (381)
T PLN02740 279 VEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELP 358 (381)
T ss_pred hHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEec
Confidence 88999999999883399999997654322333333234688898887655443356889999999999988888899999
Q ss_pred CCcHHHHHHHHhcCCcceEEEec
Q 019414 317 FSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
|+|+++|++.+.+++..|++|+.
T Consensus 359 l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 359 FEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred HHHHHHHHHHHHCCCceeEEEeC
Confidence 99999999999988888999863
No 10
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.4e-49 Score=368.78 Aligned_cols=338 Identities=53% Similarity=0.954 Sum_probs=272.0
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||+.++|+|+.|....... ..+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|+|+....
T Consensus 41 lVkv~~~gic~sD~~~~~g~--~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~ 118 (378)
T PLN02827 41 RIKVVSTSLCRSDLSAWESQ--ALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGL 118 (378)
T ss_pred EEEEEEEecChhHHHHhcCC--CCCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccc
Confidence 58999999999996543222 2468999999999999999999999999999999999999999999999999987432
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.. .+....+....|...|..+.++...|+|+||+.+|++.++++|+++++++++.+++++.++|+++.+..++++|++|
T Consensus 119 ~~-~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~V 197 (378)
T PLN02827 119 ER-KGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSV 197 (378)
T ss_pred cc-cccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEE
Confidence 10 00000000111112222222222348999999999999999999999999999998989999887777889999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.++++.+.+..+.+.+++.+++++|++||++|.+..+
T Consensus 198 lV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~ 277 (378)
T PLN02827 198 VIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIA 277 (378)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 99999999999999999999977889988999999999999999998875433477778887766899999999987789
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 320 (341)
..+++.+++++|+++.+|.......+......+.+++++.|+....+....++++++++++++++.+.++++++|+|+++
T Consensus 278 ~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~ 357 (378)
T PLN02827 278 TTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEI 357 (378)
T ss_pred HHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHH
Confidence 99999999844999999976543222222223568899998876544333578899999999999887789999999999
Q ss_pred HHHHHHHhcCCcceEEEecCC
Q 019414 321 NKAFEYMVKGEGLRCIISMED 341 (341)
Q Consensus 321 ~ea~~~~~~~~~~k~vl~~~~ 341 (341)
++|++.+.+++..|+||.+++
T Consensus 358 ~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 358 NKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred HHHHHHHHCCCceEEEEEecC
Confidence 999999999888899998863
No 11
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=5.7e-49 Score=365.60 Aligned_cols=337 Identities=51% Similarity=0.911 Sum_probs=269.8
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
|||++++|+|+.|........ ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|.|.+..
T Consensus 31 lIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~ 110 (368)
T cd08300 31 RIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIR 110 (368)
T ss_pred EEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCcc
Confidence 589999999999965433222 2357999999999999999999999999999999999999999999999999998754
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.....|.. .+|...+..+|...++..+.|+|+||+.++++.++++|+++++++++.+++++.|||+++.+..++++|++
T Consensus 111 ~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~ 189 (368)
T cd08300 111 ATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGST 189 (368)
T ss_pred cccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCE
Confidence 32111111 01111122223222333345799999999999999999999999999999999999999878889999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+.++++.+.+++++++++|++||++|++..
T Consensus 190 VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~ 269 (368)
T cd08300 190 VAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKV 269 (368)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHH
Confidence 99999999999999999999997799999999999999999999999887653347778888877799999999998788
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
+.++++++++++|+++.+|.......+......+.++..+.++..+.+...++++++++++.++++.+.++++++|+|+|
T Consensus 270 ~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~ 349 (368)
T cd08300 270 MRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDE 349 (368)
T ss_pred HHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHH
Confidence 99999999874499999997532222222222222344566666554434467889999999999988888999999999
Q ss_pred HHHHHHHHhcCCcceEEEe
Q 019414 320 INKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl~ 338 (341)
+++|++.+.+++..|++++
T Consensus 350 ~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 350 INEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHhCCCCceeeeC
Confidence 9999999998888899874
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.1e-48 Score=360.58 Aligned_cols=326 Identities=36% Similarity=0.608 Sum_probs=268.6
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||+.++|+|+.|+..........+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++++|.....
T Consensus 30 lV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~ 109 (358)
T TIGR03451 30 IVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHN 109 (358)
T ss_pred EEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccc
Confidence 58999999999996654333334579999999999999999999999999999999999999999999999999985322
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.. ..... .+|.........|+|+||+.++++.++++|+++++++|+.+++.+.++|+++.+..++++|++|
T Consensus 110 ~~-~~~~~--------~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~V 180 (358)
T TIGR03451 110 AT-QKMTL--------TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSV 180 (358)
T ss_pred cc-ccccc--------ccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEE
Confidence 10 00000 0111100111248999999999999999999999999999999999999988888889999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN 239 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~ 239 (341)
||+|+|++|++++|+||..|+++|++++++++|++.++++|++.++++.+.+ +.+.+++.+++ ++|++|||+|++..
T Consensus 181 lV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~i~~~~~~~g~d~vid~~g~~~~ 258 (358)
T TIGR03451 181 AVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD--PVEAIRALTGGFGADVVIDAVGRPET 258 (358)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC--HHHHHHHHhCCCCCCEEEECCCCHHH
Confidence 9999999999999999999996799999999999999999999999887655 77888888876 89999999998788
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
++.++++++++ |+++.+|.........+.. ..+.+++++.++........+++++++++++++++.+.++++++|+++
T Consensus 259 ~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~ 337 (358)
T TIGR03451 259 YKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLD 337 (358)
T ss_pred HHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHH
Confidence 99999999998 9999999764332222222 234578888887654322345788999999999998888889999999
Q ss_pred cHHHHHHHHhcCCcceEEEe
Q 019414 319 EINKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 319 ~i~ea~~~~~~~~~~k~vl~ 338 (341)
|+++|++.+++++..|+++.
T Consensus 338 ~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 338 DVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred HHHHHHHHHhCCCcceeEEe
Confidence 99999999999888888875
No 13
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=6.1e-48 Score=355.45 Aligned_cols=308 Identities=20% Similarity=0.327 Sum_probs=251.9
Q ss_pred CccccccCCcCcceeeeccC---C-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG---Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~---~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
|||++++|+|++|+.....+ . ...+|.++|||++|+|+++ ++++|++||||++.+..+|+.|++|+++++|+|+
T Consensus 31 lVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~ 108 (343)
T PRK09880 31 LVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCT 108 (343)
T ss_pred EEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCC
Confidence 68999999999997643222 2 2357999999999999999 7899999999999999999999999999999998
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
+..... . ..+ .....|+|+||++++++.++++|+++++++++ +..++++||+++. .....+
T Consensus 109 ~~~~~g---~------~~~--------~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~-~~~~~~ 169 (343)
T PRK09880 109 TMRFFG---S------AMY--------FPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAH-QAGDLQ 169 (343)
T ss_pred Ccceee---c------ccc--------cCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHHH-hcCCCC
Confidence 754321 0 000 00124799999999999999999999987644 6678899999864 456668
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++++.+ +.+.. +. .+++|++|||+|+
T Consensus 170 g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~-~~-~g~~D~vid~~G~ 245 (343)
T PRK09880 170 GKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD--LDHYK-AE-KGYFDVSFEVSGH 245 (343)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc--HHHHh-cc-CCCCCEEEECCCC
Confidence 99999999999999999999999997899999999999999999999999887654 43322 22 2369999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
+..++.++++++++ |+++.+|.......+++ ...+.+++++.++... .+++++++++++++++.+.++++++|+
T Consensus 246 ~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~ 319 (343)
T PRK09880 246 PSSINTCLEVTRAK-GVMVQVGMGGAPPEFPM-MTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYP 319 (343)
T ss_pred HHHHHHHHHHhhcC-CEEEEEccCCCCCccCH-HHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEE
Confidence 78899999999998 99999997544333333 2234688889887643 257999999999999998888999999
Q ss_pred CCcHHHHHHHHhcCCc-ceEEEec
Q 019414 317 FSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++|+++|++.+.+++. +|+++.+
T Consensus 320 l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 320 FTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred HHHHHHHHHHHhcCCCceEEEEeC
Confidence 9999999999988775 6999875
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.2e-47 Score=354.58 Aligned_cols=335 Identities=53% Similarity=0.932 Sum_probs=269.6
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||+.++++|+.|+..........+|+++|||++|+|+++|++++++++||||++.+..+|++|++|+++.+++|++...
T Consensus 31 lVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~ 110 (365)
T cd08277 31 RIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRA 110 (365)
T ss_pred EEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccc
Confidence 58999999999996654333335678999999999999999999999999999999999999999999999999998654
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
... |... ++..++...|.+..+....|+|+||++++.+.++++|+++++++++.+++++.|||+++.+..++++|++|
T Consensus 111 ~~~-g~~~-~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~v 188 (365)
T cd08277 111 NES-GLMP-DGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTV 188 (365)
T ss_pred ccc-cccc-CCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEE
Confidence 311 1110 00011111121111222358999999999999999999999999999999999999998788899999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.++++.+.+..+.+.+++.+++++|++||++|+...+
T Consensus 189 lV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 268 (365)
T cd08277 189 AVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLM 268 (365)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 99999999999999999999877999999999999999999999988766433356777777767899999999987888
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 320 (341)
..+++++++++|+++.+|..... ..+.....+.+++++.|+..+.+....++++++++++++.+.+.++++++|+++|+
T Consensus 269 ~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 347 (365)
T cd08277 269 NEALESTKLGWGVSVVVGVPPGA-ELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEI 347 (365)
T ss_pred HHHHHhcccCCCEEEEEcCCCcc-ccccCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhH
Confidence 99999998733999999975422 12222222334788888876655434578999999999998888889999999999
Q ss_pred HHHHHHHhcCCcceEEEe
Q 019414 321 NKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 321 ~ea~~~~~~~~~~k~vl~ 338 (341)
++|++.+.+++..|++++
T Consensus 348 ~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 348 NKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHCCCCceEeeC
Confidence 999999988887898874
No 15
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.2e-47 Score=351.40 Aligned_cols=309 Identities=29% Similarity=0.486 Sum_probs=261.2
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||+.++++|+.|........ ...+|.++|||++|+|+++|++++++++||||++.+..+|+.|++|+++++|.|.+.
T Consensus 28 lV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~ 107 (339)
T cd08239 28 LLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSK 107 (339)
T ss_pred EEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCc
Confidence 589999999999965533322 123588999999999999999999999999999999999999999999999999875
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
... .| ....|+|+||++++.+.++++|+++++++|+.+++++.|||+++ +...+++|+
T Consensus 108 ~~~--~g-------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~ 165 (339)
T cd08239 108 RAA--YG-------------------WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRD 165 (339)
T ss_pred ccc--cc-------------------cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCC
Confidence 320 01 11247999999999999999999999999999999999999996 567889999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
+|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++++++.+ .+.+.+.+++ ++|++|||+|+.
T Consensus 166 ~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~---~~~~~~~~~~~~~d~vid~~g~~ 242 (339)
T cd08239 166 TVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEIRELTSGAGADVAIECSGNT 242 (339)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch---HHHHHHHhCCCCCCEEEECCCCH
Confidence 999999999999999999999995599999999999999999999999886542 4566677766 899999999997
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
..++.++++++++ |+++.+|..... .+......+.+++++.|+..... ++++++++++.++++.+.++++++|++
T Consensus 243 ~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~i~~~~~i~~~~~l 317 (339)
T cd08239 243 AARRLALEAVRPW-GRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSV---PDMEECAEFLARHKLEVDRLVTHRFGL 317 (339)
T ss_pred HHHHHHHHHhhcC-CEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCChhHeEEEEecH
Confidence 7778999999998 999999975432 22222233568899998876543 578999999999999888889999999
Q ss_pred CcHHHHHHHHhcCCcceEEEec
Q 019414 318 SEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
+++++|++.+.+++.+|+|++|
T Consensus 318 ~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 318 DQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHcCCceEEEEeC
Confidence 9999999999888778999875
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.2e-46 Score=345.74 Aligned_cols=314 Identities=29% Similarity=0.417 Sum_probs=256.6
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCc-cccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPR-IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~-i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++|+|-+|+.....+. ....|. ++|||++|+|+++| .++.+++||||++.|..+|+.|++|+++.+|+|++.
T Consensus 29 lVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~ 107 (350)
T COG1063 29 LIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENP 107 (350)
T ss_pred EEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCc
Confidence 589999999999966544433 334455 99999999999999 778899999999999999999999999999999965
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEE-CCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK-INPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~-lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
.+...... ....+|+|+||+++|.+.+++ +|+++ ..+++++.+++++++++........++
T Consensus 108 ~~~g~~~~-----------------~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~ 169 (350)
T COG1063 108 GFYGYAGL-----------------GGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPG 169 (350)
T ss_pred cccccccc-----------------cCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCC
Confidence 44311100 001247999999999765555 58888 677788999999998874444555666
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
++|+|+|+|++|++++++++.+|+.+|++++.+++|++++++ .|++.+++..+.+ ....+.+.+.+ ++|++|||+|
T Consensus 170 ~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~--~~~~~~~~t~g~g~D~vie~~G 247 (350)
T COG1063 170 GTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDD--AGAEILELTGGRGADVVIEAVG 247 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcccc--HHHHHHHHhCCCCCCEEEECCC
Confidence 699999999999999999999999999999999999999999 6667666665543 77788888888 9999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
.+..+++++++++++ |+++++|....... ++. ...+.|++++.|+.... ...+++.+++++++|++.+.++++++
T Consensus 248 ~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~~~~~-~~~~~kel~l~gs~~~~--~~~~~~~~~~ll~~g~i~~~~lit~~ 323 (350)
T COG1063 248 SPPALDQALEALRPG-GTVVVVGVYGGEDIPLPA-GLVVSKELTLRGSLRPS--GREDFERALDLLASGKIDPEKLITHR 323 (350)
T ss_pred CHHHHHHHHHHhcCC-CEEEEEeccCCccCccCH-HHHHhcccEEEeccCCC--CcccHHHHHHHHHcCCCChhHceEee
Confidence 988999999999998 99999998766542 222 23467899999984311 12579999999999999999999999
Q ss_pred ecCCcHHHHHHHHhcCCc--ceEEEec
Q 019414 315 IPFSEINKAFEYMVKGEG--LRCIISM 339 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~--~k~vl~~ 339 (341)
++++++++|++.+.+.+. .|+++.+
T Consensus 324 ~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 324 LPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 999999999999987653 5998864
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.8e-46 Score=348.06 Aligned_cols=321 Identities=21% Similarity=0.291 Sum_probs=246.9
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||++++|+|++|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|.+...
T Consensus 37 lVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~ 116 (393)
T TIGR02819 37 ILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNP 116 (393)
T ss_pred EEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCC
Confidence 68999999999996654332233579999999999999999999999999999999999999999999999999997532
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCc----hhhhhccccchhhhhhhhhhcCC
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKP 154 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~----~~aa~l~~~~~ta~~~l~~~~~~ 154 (341)
+.. +.. .++...| ...|+|+||+++|+. .++++|++++. ..++++.+++.++|+++ +..++
T Consensus 117 ~~~-~~~-----~g~~~~~------~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~ 183 (393)
T TIGR02819 117 ARA-GAA-----YGYVDMG------GWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGV 183 (393)
T ss_pred CCc-cce-----ecccccC------CCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCC
Confidence 110 000 0100000 013799999999964 79999998753 35677888999999986 45789
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 233 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~ 233 (341)
++|++|||.|+|++|++++|+|+.+|++.|++++++++|+++++++|++.+....+.+ +.+.+.+.+++ ++|++||+
T Consensus 184 ~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~--~~~~v~~~~~~~g~Dvvid~ 261 (393)
T TIGR02819 184 GPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDAT--LPEQIEQILGEPEVDCAVDC 261 (393)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCccc--HHHHHHHHcCCCCCcEEEEC
Confidence 9999999998999999999999999996677778889999999999997533222333 66778887776 89999999
Q ss_pred cCCh--------------HHHHHHHHHhcCCCcEEEEEccCCC-Cc-ccc---------cc-cceeeecceEEEeeecCC
Q 019414 234 TGNI--------------DNMISAFECVHDGWGVAVLVGVPSK-DA-VFM---------TK-PINVLNERTLKGTFFGNY 287 (341)
Q Consensus 234 ~g~~--------------~~~~~~~~~l~~~~g~~v~~g~~~~-~~-~~~---------~~-~~~~~~~~~~~g~~~~~~ 287 (341)
+|.+ ..+++++++++++ |+++.+|.... +. ..+ .. ...+.+++++.+.. .
T Consensus 262 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~ 337 (393)
T TIGR02819 262 VGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---T 337 (393)
T ss_pred CCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---C
Confidence 9985 4899999999998 99999998632 11 111 00 11123445555421 1
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCcee-eeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414 288 KPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEGLRCIISME 340 (341)
Q Consensus 288 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~i~ea~~~~~~~~~~k~vl~~~ 340 (341)
...+.+++++++++++++.+.++++ ++|+|+++++|++.+.+++.+|+++++.
T Consensus 338 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 338 PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 1112347899999999998877777 7899999999999999887889999864
No 18
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=8.2e-45 Score=335.31 Aligned_cols=312 Identities=22% Similarity=0.337 Sum_probs=255.1
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||++++++|+.|...........+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+.+.++.|.....
T Consensus 29 lV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~ 108 (347)
T PRK10309 29 LVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF 108 (347)
T ss_pred EEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce
Confidence 58999999999996432111112368899999999999999999999999999999999999999999999999976432
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.. ....|+|+||+.++++.++++|+++++++|+.+. ++++++++ .+...+++|++|
T Consensus 109 ~g----------------------~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~v 164 (347)
T PRK10309 109 IG----------------------SRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNV 164 (347)
T ss_pred ec----------------------cCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEE
Confidence 10 1124799999999999999999999999988763 45667877 466788999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-Ccc-EEEeccCChH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD-RSVECTGNID 238 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d-~vld~~g~~~ 238 (341)
||+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++.+ .+.+.+.+.+ ++| ++|||+|.+.
T Consensus 165 lV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~---~~~~~~~~~~~~~d~~v~d~~G~~~ 241 (347)
T PRK10309 165 IIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS---APQIQSVLRELRFDQLILETAGVPQ 241 (347)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC---HHHHHHHhcCCCCCeEEEECCCCHH
Confidence 9999999999999999999996689999999999999999999998876543 3446666665 888 9999999878
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccc--cceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
.+.+++++++++ |+++.+|....+..++.. ...+.+++++.|+..+... ..+++++++++++++++.+.++++++
T Consensus 242 ~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~ 320 (347)
T PRK10309 242 TVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHR 320 (347)
T ss_pred HHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEE
Confidence 999999999998 999999976543222211 1235678899987654221 12578899999999999888889999
Q ss_pred ecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414 315 IPFSEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
|+|+|+++|++.+.+++. +|+|++++
T Consensus 321 ~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 321 GSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred eeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 999999999999988875 59999764
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=4.1e-45 Score=338.34 Aligned_cols=309 Identities=21% Similarity=0.327 Sum_probs=244.1
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++++|+|+.|+....... ...+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|++|++|.+|+|++.
T Consensus 41 lV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~ 120 (360)
T PLN02586 41 TVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM 120 (360)
T ss_pred EEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCc
Confidence 589999999999965432211 2356899999999999999999999999999986544 57999999999999999875
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+... ....+| ....|+|+||+++|++.++++|+++++++||++++.+.|+|+++.....+++|+
T Consensus 121 ~~~~~----------~~~~~g-----~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~ 185 (360)
T PLN02586 121 IFTYN----------SIGHDG-----TKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGK 185 (360)
T ss_pred ccccc----------ccccCC-----CcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCC
Confidence 43100 000011 011379999999999999999999999999999999999999876666778999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
+|||.|+|++|++++|+||.+|+ +|++++.++++ .+.++++|++.++++.+. +.+++.++ ++|++||++|++
T Consensus 186 ~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~~~~~~~~-~~D~vid~~g~~ 258 (360)
T PLN02586 186 HLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDP-----EKMKAAIG-TMDYIIDTVSAV 258 (360)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCCH-----HHHHhhcC-CCCEEEECCCCH
Confidence 99999999999999999999999 67776666555 556788999988876542 23444443 699999999987
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
..+++++++++++ |+++.+|.......++.. ..+.++..+.++..+.. .++++++++++++++.+. + ++|+|
T Consensus 259 ~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~li~~g~i~~~--~-~~~~l 330 (360)
T PLN02586 259 HALGPLLGLLKVN-GKLITLGLPEKPLELPIF-PLVLGRKLVGGSDIGGI---KETQEMLDFCAKHNITAD--I-ELIRM 330 (360)
T ss_pred HHHHHHHHHhcCC-cEEEEeCCCCCCCccCHH-HHHhCCeEEEEcCcCCH---HHHHHHHHHHHhCCCCCc--E-EEEeH
Confidence 7899999999998 999999965433333332 22446677777664432 468999999999988753 3 68999
Q ss_pred CcHHHHHHHHhcCCc-ceEEEec
Q 019414 318 SEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+|+++|++.+.+++. +|+|+.+
T Consensus 331 ~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 331 DEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999999999886 5999876
No 20
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.4e-45 Score=338.17 Aligned_cols=309 Identities=22% Similarity=0.324 Sum_probs=245.7
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++++|+|+.|+....... ...+|.++|||++|+|+++|+++++|++||||++.+.. +|+.|++|+++++|+|++.
T Consensus 35 lVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~ 114 (375)
T PLN02178 35 TVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKV 114 (375)
T ss_pred EEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCc
Confidence 589999999999965432221 23468999999999999999999999999999877665 6999999999999999985
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcC-CCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK-PERG 157 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g 157 (341)
.+... . +...| ....|+|+||+++|++.++++|+++++++++++++...|+|+++..... .++|
T Consensus 115 ~~~~~-------~---~~~~g-----~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g 179 (375)
T PLN02178 115 VFTYN-------S---RSSDG-----TRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESG 179 (375)
T ss_pred ccccc-------c---cccCC-----CcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCC
Confidence 43100 0 00001 0113799999999999999999999999999999999999998754433 4689
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
++|+|.|+|++|++++|+||.+|+ +|++++.+++ +.+.++++|++.++++.+. +.+++.++ ++|++|||+|.
T Consensus 180 ~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-----~~v~~~~~-~~D~vid~~G~ 252 (375)
T PLN02178 180 KRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAVG-TMDFIIDTVSA 252 (375)
T ss_pred CEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-----HHHHHhhC-CCcEEEECCCc
Confidence 999999999999999999999999 6787776654 4778899999998876542 23444443 69999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
+..+.+++++++++ |+++.+|.......++.. ..+.+++++.|+..... ++++++++++++|++.+. + +.|+
T Consensus 253 ~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~--i-~~~~ 324 (375)
T PLN02178 253 EHALLPLFSLLKVS-GKLVALGLPEKPLDLPIF-PLVLGRKMVGGSQIGGM---KETQEMLEFCAKHKIVSD--I-ELIK 324 (375)
T ss_pred HHHHHHHHHhhcCC-CEEEEEccCCCCCccCHH-HHHhCCeEEEEeCccCH---HHHHHHHHHHHhCCCccc--E-EEEe
Confidence 77889999999998 999999975433333332 23457888888775543 578999999999988654 3 6799
Q ss_pred CCcHHHHHHHHhcCCc-ceEEEec
Q 019414 317 FSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
|+|+++|++.+.+++. +|+|+.+
T Consensus 325 l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 325 MSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHHHHHcCCCceEEEEEe
Confidence 9999999999998886 5999876
No 21
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.9e-45 Score=331.51 Aligned_cols=286 Identities=26% Similarity=0.361 Sum_probs=233.9
Q ss_pred CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++|+|+||.|......... .++|+|||.|++|+|+++|++|++|++||||+..+ ..|
T Consensus 31 lVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~~~----------------- 92 (326)
T COG0604 31 LVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-GVG----------------- 92 (326)
T ss_pred EEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEcc-CCC-----------------
Confidence 6899999999999666544323 34899999999999999999999999999999873 000
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
..|+|+||+.+|++.++++|+++|+++||++++++.|||+++....++++|+
T Consensus 93 ----------------------------~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~ 144 (326)
T COG0604 93 ----------------------------RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGE 144 (326)
T ss_pred ----------------------------CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1379999999999999999999999999999999999999999989999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|||+|+ |++|++++||||.+|+ .++++.+++++.++++++|+++++++.+.+ +.+.+++++++ ++|+|||++|+
T Consensus 145 ~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~--~~~~v~~~t~g~gvDvv~D~vG~ 221 (326)
T COG0604 145 TVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLDTVGG 221 (326)
T ss_pred EEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHcCCCCceEEEECCCH
Confidence 9999985 9999999999999998 666666777777799999999999998887 99999999998 99999999988
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCC--C-CCCCHHHHHHHHHCCCCCCCCcee
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNY--K-PRTDLPSVVDMYMNKQLELEKFIT 312 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~--~-~~~~~~~~~~~~~~~~i~~~~~~~ 312 (341)
+.+..++++++++ |+++.+|...+....... ..++.+.++..+...... . ..+.++++++++.+|++++. ++
T Consensus 222 -~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~ 297 (326)
T COG0604 222 -DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--ID 297 (326)
T ss_pred -HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--ec
Confidence 7888999999998 999999987631111121 222346666676655432 1 12467779999999977555 67
Q ss_pred eeecCCcHHHHHHHHhc-CC-cceEEEec
Q 019414 313 HRIPFSEINKAFEYMVK-GE-GLRCIISM 339 (341)
Q Consensus 313 ~~~~~~~i~ea~~~~~~-~~-~~k~vl~~ 339 (341)
.+|++++..++...... ++ .+|+|+++
T Consensus 298 ~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 298 RVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 89999996555553333 34 46999874
No 22
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.8e-44 Score=333.14 Aligned_cols=308 Identities=21% Similarity=0.388 Sum_probs=255.7
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||+.++|+|+.|......+. ...+|.++|||++|+|+++|++++.+ +||||++.+..+|++|++|+++++|+|...
T Consensus 27 lVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~ 105 (349)
T TIGR03201 27 VVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQ 105 (349)
T ss_pred EEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCC
Confidence 589999999999965432222 23568999999999999999999887 999999999999999999999999999875
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCC------CCCchhhhhccccchhhhhhhhhhc
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------LAPLDKVCILSCGVSTGLGATLNVA 152 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~------~~~~~~aa~l~~~~~ta~~~l~~~~ 152 (341)
.... ....|+|+||++++.+.++++|+ +++++.++.+++++.++|+++. ..
T Consensus 106 ~~~g----------------------~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~ 162 (349)
T TIGR03201 106 KMPG----------------------NDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QA 162 (349)
T ss_pred CccC----------------------cCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hc
Confidence 4320 11137999999999999999999 8999999999999999999864 57
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-hhHHHHHHHHhcC-Ccc--
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GVD-- 228 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~i~~~~~~-~~d-- 228 (341)
.+++|++|+|+|+|++|++++|+|+..|+ +|++++++++|++.++++|++.++++.+.+ .++.+.+++.+++ ++|
T Consensus 163 ~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~ 241 (349)
T TIGR03201 163 GLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRST 241 (349)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCC
Confidence 89999999999999999999999999999 799999999999999999999988876543 2367778888876 776
Q ss_pred --EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414 229 --RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 306 (341)
Q Consensus 229 --~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 306 (341)
++|||+|+...++.++++++++ |+++.+|.......+++. ..+.++.++.|++.... .+++++++++.++++.
T Consensus 242 ~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~~g~~~~~~---~~~~~~~~~i~~g~i~ 316 (349)
T TIGR03201 242 GWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLS-NLMAFHARALGNWGCPP---DRYPAALDLVLDGKIQ 316 (349)
T ss_pred cCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccCHH-HHhhcccEEEEEecCCH---HHHHHHHHHHHcCCCC
Confidence 8999999988888999999998 999999976543333322 22345677777764332 5799999999999998
Q ss_pred CCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 307 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 307 ~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+.++++ .|+|+++++|++.+++++. +|+++++
T Consensus 317 ~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 317 LGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 877664 7999999999999998885 4888753
No 23
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.6e-43 Score=329.32 Aligned_cols=337 Identities=45% Similarity=0.789 Sum_probs=265.7
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|...........+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+++++|+|+....
T Consensus 36 lvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 115 (373)
T cd08299 36 RIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDL 115 (373)
T ss_pred EEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCccc
Confidence 57899999999996554333334578899999999999999999999999999999999999999999999999987543
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
....++.. ++..+....|....+....|+|+||++++.+.++++|+++++++++.+++++.+||+++....++++|++|
T Consensus 116 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~V 194 (373)
T cd08299 116 GKPQGLMQ-DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC 194 (373)
T ss_pred cccccccc-CCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEE
Confidence 22222221 11111112222222222358999999999999999999999999999999999999998888899999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++.+++..+.+.++.+.+++++.+++|+++||+|++..+
T Consensus 195 lV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~ 274 (373)
T cd08299 195 AVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTM 274 (373)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHH
Confidence 99988999999999999999867999999999999999999999988765443366667776666899999999977778
Q ss_pred HHHHHHh-cCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 241 ISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 241 ~~~~~~l-~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
..++..+ +++ |+++.+|.......++..+..+.++.++.++....+.....+.++++.+.++.+.+.+++++.|++++
T Consensus 275 ~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 353 (373)
T cd08299 275 KAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK 353 (373)
T ss_pred HHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHH
Confidence 8877765 466 99999997543323333332234677888877655433346777888888887777777889999999
Q ss_pred HHHHHHHHhcCCcceEEEec
Q 019414 320 INKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl~~ 339 (341)
+++|++.+.+++..|+++++
T Consensus 354 ~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 354 INEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHhCCCcceEEEeC
Confidence 99999999888778988864
No 24
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.2e-43 Score=326.72 Aligned_cols=336 Identities=44% Similarity=0.803 Sum_probs=273.3
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|+..........+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+++++++|.....
T Consensus 29 lv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (365)
T cd05279 29 RIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRG 108 (365)
T ss_pred EEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCccc
Confidence 57899999999996544333334568899999999999999999999999999999999999999999999999988765
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
...-|. ..+|...|...|....+..+.|+|++|+.++++.++++|+++++++++.+++++.+||+++.+.+++.+|++|
T Consensus 109 ~~~~g~-~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~v 187 (365)
T cd05279 109 TNGRGL-MSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC 187 (365)
T ss_pred cccccc-ccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEE
Confidence 543332 1233334444444333444568999999999999999999999999999999999999998888899999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++.+++.++.+..+.+.+++.+++++|++||++|....+
T Consensus 188 lI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~ 267 (365)
T cd05279 188 AVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTL 267 (365)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHH
Confidence 99988999999999999999967888888999999999999999988776532377777777766999999999877889
Q ss_pred HHHHHHhc-CCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 241 ISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 241 ~~~~~~l~-~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
..++++++ ++ |+++.+|.........+....+.++.++.|+...++...+.++.++++++++.+.+.+++++.+++++
T Consensus 268 ~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~ 346 (365)
T cd05279 268 KQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEE 346 (365)
T ss_pred HHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHH
Confidence 99999999 87 99999986532112222222225677788876655544467889999999998887667789999999
Q ss_pred HHHHHHHHhcCCcceEEEe
Q 019414 320 INKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl~ 338 (341)
+++|++.+.+++..|++|+
T Consensus 347 ~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 347 INDGFDLMRSGESIRTILT 365 (365)
T ss_pred HHHHHHHHhCCCceeeeeC
Confidence 9999999988877788764
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2e-43 Score=323.24 Aligned_cols=294 Identities=19% Similarity=0.274 Sum_probs=242.2
Q ss_pred CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++++|+|+.|......... ..+|.++|||++|+|+++|++++++++||||++.+. .+|+.|++|+++++|+|...
T Consensus 31 lVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~ 110 (329)
T TIGR02822 31 LVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPAS 110 (329)
T ss_pred EEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCc
Confidence 5899999999999654422221 234789999999999999999999999999988765 47999999999999999875
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+. | ....|+|+||+.+++..++++|+++++++++++++++.|||+++. ..++++|+
T Consensus 111 ~~~------------g----------~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~ 167 (329)
T TIGR02822 111 RYT------------G----------WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL-RASLPPGG 167 (329)
T ss_pred ccC------------C----------cccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH-hcCCCCCC
Confidence 432 1 112479999999999999999999999999999999999999974 57899999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.++++.+.. .+++|+++++.+.+.
T Consensus 168 ~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----------~~~~d~~i~~~~~~~ 235 (329)
T TIGR02822 168 RLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP-----------PEPLDAAILFAPAGG 235 (329)
T ss_pred EEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC-----------cccceEEEECCCcHH
Confidence 99999999999999999999999 799999999999999999999998754321 136899999888878
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
.++.++++++++ |+++.+|..... ..++. ...+.+++++.++..... .++.+++++++++++. +++++|+|
T Consensus 236 ~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~---~i~~~~~l 307 (329)
T TIGR02822 236 LVPPALEALDRG-GVLAVAGIHLTDTPPLNY-QRHLFYERQIRSVTSNTR---ADAREFLELAAQHGVR---VTTHTYPL 307 (329)
T ss_pred HHHHHHHhhCCC-cEEEEEeccCccCCCCCH-HHHhhCCcEEEEeecCCH---HHHHHHHHHHHhCCCe---eEEEEEeH
Confidence 999999999998 999999974322 22222 122457888887754322 4688899999999875 35789999
Q ss_pred CcHHHHHHHHhcCCcc-eEEE
Q 019414 318 SEINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~~-k~vl 337 (341)
+|+++|++.+.+++.. |+|+
T Consensus 308 ~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 308 SEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHHcCCCceEEEe
Confidence 9999999999988864 8876
No 26
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.7e-43 Score=326.13 Aligned_cols=305 Identities=26% Similarity=0.343 Sum_probs=237.9
Q ss_pred CccccccCCcCcceeeeccCC--CC--CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TP--LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~--~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
|||++++|+|+.|+....... .+ .+|.++|||++|+|+++|++ +.|++||||++.+..+|+.|++|+++++++|+
T Consensus 29 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~ 107 (355)
T cd08230 29 LVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE 107 (355)
T ss_pred EEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCC
Confidence 689999999999976543321 11 35789999999999999999 99999999999998999999999999999998
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhh------
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN------ 150 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~------ 150 (341)
...+.. .|. ....|+|+||+.++++.++++|++++ +++++.+++++++.++..
T Consensus 108 ~~~~~~----------~g~---------~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~~~~ 166 (355)
T cd08230 108 TGEYTE----------RGI---------KGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAVQK 166 (355)
T ss_pred Ccceec----------cCc---------CCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhhhhh
Confidence 753310 000 01237999999999999999999998 345555666666555322
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414 151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV 227 (341)
Q Consensus 151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~---~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~ 227 (341)
...+++|++|+|+|+|++|++++|+||..|+ +|+++++ +++|+++++++|++. +++.+.+ +.+ . . ..+++
T Consensus 167 ~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~--~~~-~-~-~~~~~ 239 (355)
T cd08230 167 RLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--VAE-V-K-LVGEF 239 (355)
T ss_pred hcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc--hhh-h-h-hcCCC
Confidence 2236789999999999999999999999999 7888887 688999999999986 4555433 333 2 1 23489
Q ss_pred cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-----cceeeecceEEEeeecCCCCCCCHHHHHHHHHC
Q 019414 228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN 302 (341)
Q Consensus 228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 302 (341)
|++|||+|++..++.++++++++ |+++.+|.......+++. ...+.+++++.|+..... ++++++++++.+
T Consensus 240 d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~---~~~~~~~~~l~~ 315 (355)
T cd08230 240 DLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANK---RHFEQAVEDLAQ 315 (355)
T ss_pred CEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCch---hhHHHHHHHHHh
Confidence 99999999877899999999998 999999976542222222 223558899998765433 578999999988
Q ss_pred CCC----CCCCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414 303 KQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 303 ~~i----~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
+.+ .+.++++++|+++|+++|++.+.++. .|+||+|
T Consensus 316 ~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 316 WKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 762 35667899999999999999886554 6999875
No 27
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.7e-42 Score=320.41 Aligned_cols=308 Identities=30% Similarity=0.475 Sum_probs=258.0
Q ss_pred CccccccCCcCcceeeeccCC--C----------CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--T----------PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR 68 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~----------~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~ 68 (341)
|||+.++++|+.|......+. . ..+|.++|||++|+|+++|++++++++||+|++.+..+|++|.+|+
T Consensus 28 lV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~ 107 (351)
T cd08233 28 KIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACK 107 (351)
T ss_pred EEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHh
Confidence 589999999999964322111 0 1368899999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhh
Q 019414 69 SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 148 (341)
Q Consensus 69 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l 148 (341)
++++++|....+.. +. ...|+|+||+.++.+.++++|+++++++++.+ .++.|||+++
T Consensus 108 ~~~~~~~~~~~~~~------------~~---------~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l 165 (351)
T cd08233 108 RGLYNLCDSLGFIG------------LG---------GGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV 165 (351)
T ss_pred CcCcccCCCCceec------------cC---------CCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH
Confidence 99999998654311 00 01379999999999999999999999988765 6788999997
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-Cc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 227 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~ 227 (341)
...++++|++|+|+|+|.+|++++|+|+.+|+++|+++++++++.+.++++|++.++++++.+ +.+.+++.+++ ++
T Consensus 166 -~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~--~~~~l~~~~~~~~~ 242 (351)
T cd08233 166 -RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVRKLTGGGGV 242 (351)
T ss_pred -HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccC--HHHHHHHHhCCCCC
Confidence 778899999999999999999999999999997889998999999999999999999987766 88888888876 79
Q ss_pred cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCC
Q 019414 228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 307 (341)
Q Consensus 228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 307 (341)
|++||++|++..++.++++++++ |+++.+|.......++. ...+.+++++.++..... +++++++++++++++.+
T Consensus 243 d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l~~ 317 (351)
T cd08233 243 DVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKPISFNP-NDLVLKEKTLTGSICYTR---EDFEEVIDLLASGKIDA 317 (351)
T ss_pred CEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCCCccCH-HHHHhhCcEEEEEeccCc---chHHHHHHHHHcCCCCh
Confidence 99999999878899999999998 99999997653322222 123457888888764432 67999999999999987
Q ss_pred CCceeeeecCCcH-HHHHHHHhcCCc--ceEEEe
Q 019414 308 EKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS 338 (341)
Q Consensus 308 ~~~~~~~~~~~~i-~ea~~~~~~~~~--~k~vl~ 338 (341)
.++++++|+++|+ ++|++.+.+++. +|+||.
T Consensus 318 ~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 318 EPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 7778899999996 799999988874 688873
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.1e-42 Score=320.92 Aligned_cols=320 Identities=25% Similarity=0.401 Sum_probs=259.9
Q ss_pred CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCC------CCCCCEEEecccCCCCCChhhcCCCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRSDVSN 73 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~c~~c~~c~~~~~~ 73 (341)
|||+.++++|+.|+........ ..+|.++|||++|+|+++|+++++ |++||+|++.+..+|+.|.+|+.+.+|
T Consensus 29 lV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~ 108 (361)
T cd08231 29 LVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPT 108 (361)
T ss_pred EEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCcc
Confidence 5899999999999665433222 467889999999999999999986 999999999999999999999999999
Q ss_pred CCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhhhhhhc
Q 019414 74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVA 152 (341)
Q Consensus 74 ~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~ 152 (341)
+|....+.+... . .+. ....|+|+||+.++++ .++++|++++.++++.+++++.|||+++.+..
T Consensus 109 ~c~~~~~~~~~~----------~-~~~----~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~ 173 (361)
T cd08231 109 KCENRKKYGHEA----------S-CDD----PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAG 173 (361)
T ss_pred ccccchhccccc----------c-ccC----CCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhcc
Confidence 998765431100 0 000 0013799999999996 79999999999999988899999999987766
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-hhHHHHHHHHhcC-CccEE
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GVDRS 230 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~i~~~~~~-~~d~v 230 (341)
..++|++|||+|+|++|++++++|+.+|++.|+++++++++.+.++++|++.++++++.+ ..+.+.+++.+++ ++|++
T Consensus 174 ~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~v 253 (361)
T cd08231 174 PVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVV 253 (361)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEE
Confidence 677999999999899999999999999997788888999999999999999888876543 1233567777776 89999
Q ss_pred EeccCChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCC--CCCC
Q 019414 231 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLEL 307 (341)
Q Consensus 231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~i~~ 307 (341)
||++|+...++.++++++++ |+++.+|.........+.. ..+.+++++.++..... ++++++++++.++ .+.+
T Consensus 254 id~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 329 (361)
T cd08231 254 IEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP---SHLYRAVRFLERTQDRFPF 329 (361)
T ss_pred EECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc---hhHHHHHHHHHhccCcCCc
Confidence 99998877889999999998 9999999654322222222 12557888887765433 5789999999988 6667
Q ss_pred CCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414 308 EKFITHRIPFSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 308 ~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
.+++++.|+++++++|++.+.+++.+|+||.+
T Consensus 330 ~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 330 AELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred hhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 77788999999999999999888778999864
No 29
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.3e-42 Score=311.09 Aligned_cols=268 Identities=26% Similarity=0.404 Sum_probs=219.8
Q ss_pred cccccceEEEEEecCCCC------CCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCc
Q 019414 28 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 101 (341)
Q Consensus 28 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~ 101 (341)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|++|+++++|+|++..+.... ..+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~------------~~~-- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHE------------ALD-- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcc------------ccc--
Confidence 589999999999999999 899999999999999999999999999999886543100 000
Q ss_pred cccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Q 019414 102 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG 180 (341)
Q Consensus 102 ~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g 180 (341)
.+...+|+|+||+++|++ .++++|+++++++++.+++.+.|+|+++. .....+|++|||+|+|++|++++|+||.+|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 001124799999999997 79999999999999999999999999864 455669999999999999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 181 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 181 ~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
+++|++++++++|+++++++|++.++++.+ ..+.+++.+.+ ++|++||++|.+..+++++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966899999999999999999998887643 34456666666 8999999999888899999999998 99999996
Q ss_pred CCC--CcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCC--CCCCCCceeeeecCCcH
Q 019414 260 PSK--DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI 320 (341)
Q Consensus 260 ~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~i 320 (341)
... ...++. ...+.+++++.|+..+.. ++++++++++.++ ++.+.++++++|+++|+
T Consensus 220 ~~~~~~~~i~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDP-EQVVRRWLTIRGVHNYEP---RHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCH-HHHHhCCcEEEecCCCCH---HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 532 222222 233568999998764432 5799999999974 67777889999999874
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5.2e-42 Score=317.48 Aligned_cols=310 Identities=22% Similarity=0.357 Sum_probs=245.1
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~ 78 (341)
|||+.++++|+.|+....... ...+|.++|||++|+|+++|+++++|++||+|++.+.. +|+.|++|+++.+++|...
T Consensus 38 lVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~ 117 (357)
T PLN02514 38 VIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKR 117 (357)
T ss_pred EEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCc
Confidence 589999999999965442221 23468999999999999999999999999999876544 7999999999999999875
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+.. + .++ ..| ....|+|+||++++.+.++++|+++++++++++++++.|||+++......++|+
T Consensus 118 ~~~~-------~--~~~-~~g-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~ 182 (357)
T PLN02514 118 IWSY-------N--DVY-TDG-----KPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGL 182 (357)
T ss_pred cccc-------c--ccc-cCC-----ccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCC
Confidence 3210 0 000 011 112479999999999999999999999999999999999999976666678999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
+++|+|+|++|++++|+||..|+ +++++++++++++. ++++|++.++++.+. +.+.+.+ .++|++||++|..
T Consensus 183 ~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~~~~~~-~~~D~vid~~g~~ 255 (357)
T PLN02514 183 RGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSDA-----AEMQEAA-DSLDYIIDTVPVF 255 (357)
T ss_pred eEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HHHHHhc-CCCcEEEECCCch
Confidence 99999989999999999999999 67777777766654 567999887765432 2334443 3699999999987
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
..++.++++++++ |+++.+|.......++. ...+.+++++.|+..... .++++++++++++++. +++ ++|++
T Consensus 256 ~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l~--~~i-~~~~l 327 (357)
T PLN02514 256 HPLEPYLSLLKLD-GKLILMGVINTPLQFVT-PMLMLGRKVITGSFIGSM---KETEEMLEFCKEKGLT--SMI-EVVKM 327 (357)
T ss_pred HHHHHHHHHhccC-CEEEEECCCCCCCcccH-HHHhhCCcEEEEEecCCH---HHHHHHHHHHHhCCCc--CcE-EEEcH
Confidence 7899999999998 99999997643323332 223567889998876543 4789999999999764 344 68999
Q ss_pred CcHHHHHHHHhcCCc-ceEEEecC
Q 019414 318 SEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
+|+++|++.+.+++. +|+|+.+.
T Consensus 328 ~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 328 DYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred HHHHHHHHHHHcCCCceeEEEEcc
Confidence 999999999998886 59999875
No 31
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=288.88 Aligned_cols=284 Identities=23% Similarity=0.259 Sum_probs=239.1
Q ss_pred CccccccCCcCcceeeecc-CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQ-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
.||++|+|+|+.|.+++.. ..+++.|++||.|.+|+|+.+|++|+++++||||+....
T Consensus 39 ~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~--------------------- 97 (336)
T KOG1197|consen 39 TIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP--------------------- 97 (336)
T ss_pred EEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEEecc---------------------
Confidence 4799999999999776533 336678999999999999999999999999999986621
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.|.|+|++.+|...++++|+.++++.||++.+.+.|||..+.+...++||++
T Consensus 98 ----------------------------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGht 149 (336)
T KOG1197|consen 98 ----------------------------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHT 149 (336)
T ss_pred ----------------------------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCE
Confidence 2799999999999999999999999999999999999999999999999999
Q ss_pred EEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 160 VAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 160 vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
|||+. +|++|+++.|++++.|+ .+|++.++++|++.+++.|+++.++++..| +.+++.+++.+ |+|+++|.+|.
T Consensus 150 VlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~- 225 (336)
T KOG1197|consen 150 VLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK- 225 (336)
T ss_pred EEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccchh--HHHHHHhccCCCCceeeeccccc-
Confidence 99996 59999999999999999 888998999999999999999999998877 99999999977 99999999987
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCC-----CHHHHHHHHHCCCCCCCCcee
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT-----DLPSVVDMYMNKQLELEKFIT 312 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~ 312 (341)
+++...+.+|++. |.+|.+|.............+-.+.+++.......|...+ ...+++.++.++.+.+. |.
T Consensus 226 dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~ 302 (336)
T KOG1197|consen 226 DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--ID 302 (336)
T ss_pred hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--ee
Confidence 8999999999998 9999999766543222111222345555433333332211 23467778888977666 88
Q ss_pred eeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414 313 HRIPFSEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 313 ~~~~~~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
++|||+++.+|++.+++.++ +|+++.+.
T Consensus 303 ~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 303 HVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred eecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 99999999999999999887 59888765
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.6e-41 Score=312.89 Aligned_cols=332 Identities=35% Similarity=0.609 Sum_probs=262.7
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|+..........+|.++|||++|+|+++|+++.++++||+|++.+. .|+.|.+|+.++.++|.+...
T Consensus 31 ~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~ 109 (365)
T cd08278 31 LVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFP 109 (365)
T ss_pred EEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCccc
Confidence 5899999999999666433333457889999999999999999999999999999764 899999999999999987543
Q ss_pred cCcccccccCCCcccccCCCccc--cccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 81 NPVRGVMLADGQSRFSINGEPVN--HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~--~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+..+ ...+|++.++.++..+. +....|+|++|+.++++.++++|+++++++++.+++++.||++++.+...+++++
T Consensus 110 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~ 188 (365)
T cd08278 110 LNFSG-RRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGS 188 (365)
T ss_pred ccccc-cccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCC
Confidence 22111 11223333332221111 1223589999999999999999999999999999999999999988888999999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|||+|+|++|++++|+|+.+|+..+++++++++|.+.++++|++.++++.+.+ +.+.+++.+++++|+++||+|++.
T Consensus 189 ~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~d~vld~~g~~~ 266 (365)
T cd08278 189 SIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEED--LVAAIREITGGGVDYALDTTGVPA 266 (365)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCCcEEEECCCCcH
Confidence 999998899999999999999997799999999999999999999998877655 777788777449999999999878
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCccccccccee-eecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
.+..++++++++ |+++.+|..............+ .+++++.++........+.+++++++++++++.+.+++ ..|++
T Consensus 267 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l 344 (365)
T cd08278 267 VIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF 344 (365)
T ss_pred HHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH
Confidence 899999999998 9999998653211122222223 57788777654333233567889999999988543333 68999
Q ss_pred CcHHHHHHHHhcCCcceEEEe
Q 019414 318 SEINKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~~k~vl~ 338 (341)
+++++|++.+.+++..|+||+
T Consensus 345 ~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 345 EDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred HHHHHHHHHHHCCCceEEEEC
Confidence 999999999998887899874
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3e-41 Score=310.46 Aligned_cols=294 Identities=18% Similarity=0.203 Sum_probs=224.3
Q ss_pred CccccccCCcCcceeeeccCCC-----CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-----PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 75 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-----~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c 75 (341)
|||++++|+|++|+........ ..+|.++|||++|+|+++|.+ .|++||||++.+..+|+ |.+| +..|+|
T Consensus 29 lVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c 103 (341)
T cd08237 29 IVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYL 103 (341)
T ss_pred EEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccC
Confidence 6899999999999765433221 357999999999999998764 79999999999888887 4456 456788
Q ss_pred ccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhh--hcC
Q 019414 76 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAK 153 (341)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~ 153 (341)
.+..+. +.. .+|+|+||+++|++.++++|+++++++|| +..+++++|+++.. ...
T Consensus 104 ~~~~~~------------g~~----------~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~ 160 (341)
T cd08237 104 PSSRFR------------SSG----------YDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIA 160 (341)
T ss_pred CCccee------------Eec----------CCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcC
Confidence 764331 111 13699999999999999999999998766 55688999998754 345
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEE
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV 231 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vl 231 (341)
+++|++|||+|+|++|++++|+|+. .|..+|++++++++|++++++++++..++. + ..+ ++|+||
T Consensus 161 ~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~------~-------~~~~g~d~vi 227 (341)
T cd08237 161 HKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD------I-------PEDLAVDHAF 227 (341)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh------h-------hhccCCcEEE
Confidence 7899999999999999999999996 665589999999999999988766533210 1 122 699999
Q ss_pred eccC---ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCC---CC
Q 019414 232 ECTG---NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK---QL 305 (341)
Q Consensus 232 d~~g---~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~i 305 (341)
|++| .+..+++++++++++ |+++.+|.......++. ...+.+++++.|+..... ++++++++++.++ +.
T Consensus 228 D~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~k~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~ 302 (341)
T cd08237 228 ECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYPVPINT-RMVLEKGLTLVGSSRSTR---EDFERAVELLSRNPEVAE 302 (341)
T ss_pred ECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCCcccCH-HHHhhCceEEEEecccCH---HHHHHHHHHHHhCCcccC
Confidence 9999 456889999999998 99999997543322332 223568889988764332 5689999999998 34
Q ss_pred CCCCceeeeecCCcH---HHHHHHHhcCCcceEEEecC
Q 019414 306 ELEKFITHRIPFSEI---NKAFEYMVKGEGLRCIISME 340 (341)
Q Consensus 306 ~~~~~~~~~~~~~~i---~ea~~~~~~~~~~k~vl~~~ 340 (341)
.+.++++++|+++++ +++++.+.++..+|+|++++
T Consensus 303 ~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 303 YLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred ChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 677888999998655 55555454444569999875
No 34
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=7e-40 Score=304.20 Aligned_cols=332 Identities=40% Similarity=0.700 Sum_probs=260.7
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||++++++|+.|...........+|+++|+|++|+|+++|++++.+++||+|++.+..+|++|++|++++.++|+....
T Consensus 29 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (363)
T cd08279 29 LVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAG 108 (363)
T ss_pred EEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCccccc
Confidence 47899999999986654333334568899999999999999999999999999999999999999999999999986421
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.- .++ ..++..++...|.........|+|++|+.++.+.++++|+++++++++.+++++.+||.++.+..++.++++|
T Consensus 109 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~v 186 (363)
T cd08279 109 IL-GGQ-LPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTV 186 (363)
T ss_pred cc-ccc-cCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEE
Confidence 00 000 0000001111121111122358999999999999999999999999999999999999998888899999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN 239 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~ 239 (341)
||+|+|++|++++++|+..|+.+|+++++++++.+.++++|++.+++.+..+ +...++..+++ ++|++||++++...
T Consensus 187 LI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~l~~~~~~~~vd~vld~~~~~~~ 264 (363)
T cd08279 187 AVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD--AVEAVRDLTDGRGADYAFEAVGRAAT 264 (363)
T ss_pred EEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCcc--HHHHHHHHcCCCCCCEEEEcCCChHH
Confidence 9998899999999999999995589998999999999999998888877655 77778877755 89999999997678
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCcccccccce-eeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
++.++++++++ |+++.++.............. ..++..+.++.+......+.+++++++++++++.+.+++++.|+++
T Consensus 265 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~ 343 (363)
T cd08279 265 IRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLD 343 (363)
T ss_pred HHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHH
Confidence 89999999998 999999865421111222211 2356666666554333345788999999999887765577899999
Q ss_pred cHHHHHHHHhcCCcceEEE
Q 019414 319 EINKAFEYMVKGEGLRCII 337 (341)
Q Consensus 319 ~i~ea~~~~~~~~~~k~vl 337 (341)
++++|++.+.+++..|.|+
T Consensus 344 ~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 344 EINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHhcCCceeEEe
Confidence 9999999999888777765
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.6e-40 Score=303.57 Aligned_cols=314 Identities=26% Similarity=0.360 Sum_probs=252.5
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
|||++++++|+.|+....... ...+|.++|||++|+|+++|++++++++||+|++.+..+|+.|..|..+.++.|.+..
T Consensus 28 lIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~ 107 (351)
T cd08285 28 IVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGML 107 (351)
T ss_pred EEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCC
Confidence 589999999999965432222 2356899999999999999999999999999999888899999999999999998742
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
. ++.. .....|+|+||+.++.+ .++++|+++++++++.++..+.|||++ .....+++|
T Consensus 108 ~----~~~~---------------~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g 167 (351)
T cd08285 108 G----GWKF---------------SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLG 167 (351)
T ss_pred C----Cccc---------------cCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCC
Confidence 1 1000 01124799999999974 899999999999999999999999998 467889999
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.+.+ +.+.+...+.+ ++|++||++|+
T Consensus 168 ~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~ 245 (351)
T cd08285 168 DTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQILKLTGGKGVDAVIIAGGG 245 (351)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCC--HHHHHHHHhCCCCCcEEEECCCC
Confidence 9999998899999999999999997799999999999999999999999887655 77778777766 89999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc--c-eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCc-ee
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--I-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF-IT 312 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~ 312 (341)
+..+..++++++++ |+++.+|............ . ...+...+.+..... ..+.++++++++.++++.+..+ ++
T Consensus 246 ~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~ 322 (351)
T cd08285 246 QDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG--GRLRMERLASLIEYGRVDPSKLLTH 322 (351)
T ss_pred HHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC--ccccHHHHHHHHHcCCCChhhceec
Confidence 77889999999998 9999998765322222211 1 112344555433211 1257999999999999887443 44
Q ss_pred eeecCCcHHHHHHHHhcCCc--ceEEEec
Q 019414 313 HRIPFSEINKAFEYMVKGEG--LRCIISM 339 (341)
Q Consensus 313 ~~~~~~~i~ea~~~~~~~~~--~k~vl~~ 339 (341)
+.++++++++|++.+.+++. +|+++.+
T Consensus 323 ~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 323 HFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred cccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 56999999999999988863 6999864
No 36
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.7e-39 Score=298.86 Aligned_cols=308 Identities=20% Similarity=0.298 Sum_probs=247.5
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
|||+.++++|+.|........ ..++|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+++++++|....
T Consensus 28 lV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (339)
T PRK10083 28 RVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLV 107 (339)
T ss_pred EEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCc
Confidence 588999999999965532222 2356899999999999999999999999999999999999999999999999997654
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
+.. ....|+|+||+.++.+.++++|++++++.++ +..++.++++ +....++++|++
T Consensus 108 ~~~----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~ 163 (339)
T PRK10083 108 VLG----------------------VHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDV 163 (339)
T ss_pred eEE----------------------EccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCE
Confidence 310 1113699999999999999999999988865 5677888885 467789999999
Q ss_pred EEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 160 VAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
|+|+|+|++|++++|+|+. +|+..+++++++++|.++++++|++.++++.+.+ +.+.+... +.++|++||++|++.
T Consensus 164 vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~~~~~-g~~~d~vid~~g~~~ 240 (339)
T PRK10083 164 ALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEP--LGEALEEK-GIKPTLIIDAACHPS 240 (339)
T ss_pred EEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHhcC-CCCCCEEEECCCCHH
Confidence 9999999999999999996 6997799999999999999999999999876644 55555331 115679999999777
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
.+..++++++++ |+++.+|.......+.. .....+++++.+... ..+.+++++++++++++.+..++++.|+++
T Consensus 241 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~ 314 (339)
T PRK10083 241 ILEEAVTLASPA-ARIVLMGFSSEPSEIVQ-QGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQ 314 (339)
T ss_pred HHHHHHHHhhcC-CEEEEEccCCCCceecH-HHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence 899999999998 99999987543221111 111246666666542 125789999999999887765577999999
Q ss_pred cHHHHHHHHhcCC-c-ceEEEecCC
Q 019414 319 EINKAFEYMVKGE-G-LRCIISMED 341 (341)
Q Consensus 319 ~i~ea~~~~~~~~-~-~k~vl~~~~ 341 (341)
++++|++.+.+++ . .|+++++.+
T Consensus 315 ~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 315 HVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred HHHHHHHHHhcCCCceEEEEEecCC
Confidence 9999999998654 3 699998864
No 37
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.7e-39 Score=298.43 Aligned_cols=313 Identities=31% Similarity=0.421 Sum_probs=255.4
Q ss_pred CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||+.++++|+.|+........ .++|.++|+|++|+|+++|++++++++||+|++.+..+||.|.+|+++.+.+|+...
T Consensus 29 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (347)
T cd05278 29 IVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGL 108 (347)
T ss_pred EEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCC
Confidence 5789999999999655433222 456899999999999999999999999999999999999999999999999998855
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
...+.+ ....|+|++|++++++ +++++|++++.++++++++++.|||+++ ...+++++
T Consensus 109 ~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~ 168 (347)
T cd05278 109 WGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPG 168 (347)
T ss_pred cccccc-------------------cCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCC
Confidence 422111 1234799999999987 9999999999999999999999999996 67889999
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
++|||.|+|.+|++++|+|+.+|...++++++++++.+.++++|++.++++.+.+ +.+.++..+++ ++|++||++++
T Consensus 169 ~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~i~~~~~~~~~d~vld~~g~ 246 (347)
T cd05278 169 STVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRGVDCVIEAVGF 246 (347)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcch--HHHHHHHHcCCCCCcEEEEccCC
Confidence 9999988899999999999999965788888889999999999999998887655 77778877775 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
...++.++++++++ |+++.+|..............+.+++++.++.... ...++++++++.++.+.+.+.+...++
T Consensus 247 ~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~ 322 (347)
T cd05278 247 EETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFP 322 (347)
T ss_pred HHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEec
Confidence 67889999999998 99999985543321112122235666666544222 357889999999998876555678899
Q ss_pred CCcHHHHHHHHhcCCc--ceEEEec
Q 019414 317 FSEINKAFEYMVKGEG--LRCIISM 339 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~--~k~vl~~ 339 (341)
+++++++++.+.+++. .|+|+++
T Consensus 323 ~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 323 LDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHHHHHHHHHHhcCCCCceEEEecC
Confidence 9999999999987775 4888763
No 38
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=4e-39 Score=301.25 Aligned_cols=329 Identities=28% Similarity=0.380 Sum_probs=256.0
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||+.++++|+.|........ ..++|.++|||++|+|+++|++++++++||+|++.+..+||.|++|+.+.+++|++..
T Consensus 29 ~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~ 108 (386)
T cd08283 29 IVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTN 108 (386)
T ss_pred EEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcc
Confidence 578999999999965532221 2246889999999999999999999999999999998999999999999999999765
Q ss_pred ccC-cccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 80 INP-VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
... ..+ .+++......|.........|+|++|++++.+ .++++|+++++++|+++++.+.|||+++ ...++.+
T Consensus 109 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~ 184 (386)
T cd08283 109 PSAEMAK---LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKP 184 (386)
T ss_pred ccccccc---ccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCC
Confidence 431 111 11111111111000000124799999999988 8999999999999999999999999997 7889999
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
|++|||+|+|.+|++++++|+..|+.+|+++++++++.+.+++++...++++.+.+ .+.+.+++.+++ ++|++||++|
T Consensus 185 g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~-~~~~~l~~~~~~~~~D~vld~vg 263 (386)
T cd08283 185 GDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVD-DVVEALRELTGGRGPDVCIDAVG 263 (386)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcch-HHHHHHHHHcCCCCCCEEEECCC
Confidence 99999998899999999999999986799999999999999998444667665532 277778888776 8999999997
Q ss_pred C---------------------hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCH
Q 019414 236 N---------------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDL 293 (341)
Q Consensus 236 ~---------------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~ 293 (341)
+ ...+..++++++++ |+++.+|..... ...... ..+.+++++.+..... .+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~ 338 (386)
T cd08283 264 MEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTHV---QRYL 338 (386)
T ss_pred CcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCCc---hHHH
Confidence 5 24688899999998 999999875432 111221 2356777777754322 2578
Q ss_pred HHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCC-c-ceEEEec
Q 019414 294 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISM 339 (341)
Q Consensus 294 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~-~-~k~vl~~ 339 (341)
+++++++.++++.+.+++++.|+++++++|++.+.+++ . +|+|+++
T Consensus 339 ~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 339 PRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 89999999998887666778999999999999998877 3 5999864
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.3e-39 Score=303.91 Aligned_cols=300 Identities=19% Similarity=0.229 Sum_probs=232.5
Q ss_pred CccccccCCcCcceeeeccCC-C-------CCCCccccccceEEEEEecCCCC-CCCCCCEEEecccCCCCCChhhcCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-T-------PLFPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVFTGECGDCRHCRSDV 71 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~-------~~~p~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~ 71 (341)
|||++++|+|++|......+. . ..+|.++|||++|+|+++|++|+ +|++||||++.+...|+.|++|..
T Consensus 30 lVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~-- 107 (410)
T cd08238 30 LVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG-- 107 (410)
T ss_pred EEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC--
Confidence 589999999999965432221 1 14688999999999999999998 699999999999999999988721
Q ss_pred CCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC----ceEECCCCCCchhhhhc-c--ccchhh
Q 019414 72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCIL-S--CGVSTG 144 (341)
Q Consensus 72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~----~~~~lp~~~~~~~aa~l-~--~~~~ta 144 (341)
++ + ...|+|+||++++.+ .++++|+++++++|+.+ + +. .++
T Consensus 108 --~g-------------------~----------~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~-~~~ 155 (410)
T cd08238 108 --YS-------------------Y----------TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCV-IGA 155 (410)
T ss_pred --cc-------------------c----------cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHH-HHH
Confidence 00 0 013799999999987 68999999999987743 2 21 123
Q ss_pred hhhh--------hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHHc--------CCc-e
Q 019414 145 LGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF--------GVT-D 204 (341)
Q Consensus 145 ~~~l--------~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~~~~~~~~~~--------g~~-~ 204 (341)
+.++ .+..++++|++|+|+|+ |++|++++|+|+.+| +.+|++++++++|++.++++ |++ .
T Consensus 156 ~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~ 235 (410)
T cd08238 156 YTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL 235 (410)
T ss_pred hhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE
Confidence 3322 24578899999999975 999999999999975 45799999999999999997 666 4
Q ss_pred ecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC-CCC--cccccccceeeecceEE
Q 019414 205 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKD--AVFMTKPINVLNERTLK 280 (341)
Q Consensus 205 vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~-~~~--~~~~~~~~~~~~~~~~~ 280 (341)
++++.+. .++.+.+++++++ ++|++||++|.+..++.++++++++ |+++.++.. ... ..++. ...+.+++++.
T Consensus 236 ~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~-~~~~~~~~~i~ 312 (410)
T cd08238 236 YVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNF-YNVHYNNTHYV 312 (410)
T ss_pred EECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccH-HHhhhcCcEEE
Confidence 6776542 1277788888877 8999999999888999999999997 877666432 211 12222 12356888998
Q ss_pred EeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414 281 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 340 (341)
Q Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~ 340 (341)
|+..... .++++++++++++++.+.++++++|+|+++++|++.+..+..+|+|+.+.
T Consensus 313 g~~~~~~---~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~~ 369 (410)
T cd08238 313 GTSGGNT---DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYTQ 369 (410)
T ss_pred EeCCCCH---HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEECC
Confidence 8764332 57899999999999999889999999999999999998443569998864
No 40
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=8.7e-39 Score=293.52 Aligned_cols=302 Identities=22% Similarity=0.401 Sum_probs=247.7
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecc-cCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF-TGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|........ ...+|.++|||++|+|+++|++++++++||+|++.+ ...|+.|++|+.|++|.|...
T Consensus 29 ~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~ 108 (333)
T cd08296 29 LIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENG 108 (333)
T ss_pred EEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCC
Confidence 478999999999865542222 235688999999999999999999999999999854 457999999999999999986
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+. ++ ...|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. .++.+++
T Consensus 109 ~~~------------~~----------~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~ 165 (333)
T cd08296 109 KVT------------GV----------TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGD 165 (333)
T ss_pred Ccc------------Cc----------ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCC
Confidence 432 11 113699999999999999999999999999999999999998754 4899999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|||+|+|.+|++++++|+.+|+ +|+++++++++++.++++|++.++++.+.+ +.+.++.. +++|+++|++|.+.
T Consensus 166 ~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~--~~~d~vi~~~g~~~ 240 (333)
T cd08296 166 LVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSKED--VAEALQEL--GGAKLILATAPNAK 240 (333)
T ss_pred EEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCCcc--HHHHHHhc--CCCCEEEECCCchH
Confidence 99999999999999999999999 789999999999999999999998887655 66666655 36999999998778
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
.++.++++++++ |+++.+|.......++. ...+.+++++.++..... .+++.+++++.++++.. ++ +.|+++
T Consensus 241 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~--~v-~~~~~~ 312 (333)
T cd08296 241 AISALVGGLAPR-GKLLILGAAGEPVAVSP-LQLIMGRKSIHGWPSGTA---LDSEDTLKFSALHGVRP--MV-ETFPLE 312 (333)
T ss_pred HHHHHHHHcccC-CEEEEEecCCCCCCcCH-HHHhhcccEEEEeCcCCH---HHHHHHHHHHHhCCCCc--eE-EEEEHH
Confidence 999999999998 99999997653322221 122468888888764332 46888889988886643 34 689999
Q ss_pred cHHHHHHHHhcCCc-ceEEEe
Q 019414 319 EINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 319 ~i~ea~~~~~~~~~-~k~vl~ 338 (341)
++.+|++.+.+++. +|+|++
T Consensus 313 ~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 313 KANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHCCCCceeEEeC
Confidence 99999999998886 588774
No 41
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.7e-38 Score=293.51 Aligned_cols=308 Identities=24% Similarity=0.376 Sum_probs=250.0
Q ss_pred CccccccCCcCcceeeeccCC--------C--CCCCccccccceEEEEEecCCCC--CCCCCCEEEecccCCCCCChhhc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--------T--PLFPRIFGHEAAGVVESVGEGVS--DLEVGDHVLPVFTGECGDCRHCR 68 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--------~--~~~p~i~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~c~~c~~c~ 68 (341)
+||+.++++|+.|........ + .++|.++|||++|+|+++|++++ +|++||+|++.+..+|+.|.+|+
T Consensus 28 ~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~ 107 (350)
T cd08256 28 LVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCN 107 (350)
T ss_pred EEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHh
Confidence 578999999999966543221 0 14678999999999999999999 99999999999999999999999
Q ss_pred CCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhh
Q 019414 69 SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGA 147 (341)
Q Consensus 69 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~ 147 (341)
++.+++|..... .++.. ...|+|++|+.++++ .++++|++++++.++.+ .++.++|++
T Consensus 108 ~~~~~~~~~~~~------------~g~~~--------~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a 166 (350)
T cd08256 108 RGQYWMCQKHDL------------YGFQN--------NVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHA 166 (350)
T ss_pred CcCcccCcCccc------------eeecc--------CCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHH
Confidence 999999974311 11100 023799999999988 57899999999998888 889999999
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-C
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G 226 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~ 226 (341)
+ +..++++|++|+|.|+|.+|++++++|+.+|+..++++++++++.+.++++|++.++++.+.+ +.+.+.+.+++ +
T Consensus 167 ~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~ 243 (350)
T cd08256 167 V-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKIKELTGGYG 243 (350)
T ss_pred H-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCC
Confidence 6 778999999999977899999999999999987788999999999999999998888876655 77788888776 8
Q ss_pred ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414 227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 306 (341)
Q Consensus 227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 306 (341)
+|++||++|+...+..++++++++ |+++.+|.......++.......+++++.++.... ..+++++++++++.+.
T Consensus 244 vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~ 318 (350)
T cd08256 244 CDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLP 318 (350)
T ss_pred CCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCC
Confidence 999999998766888999999998 99999986543322222222234667777665432 3688899999999887
Q ss_pred CCCceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414 307 LEKFITHRIPFSEINKAFEYMVKGEG-LRCII 337 (341)
Q Consensus 307 ~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl 337 (341)
+.+++++.|+++++++|++.+++++. .|+|+
T Consensus 319 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 319 TDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred hhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 65556899999999999999988775 47764
No 42
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.8e-38 Score=292.60 Aligned_cols=312 Identities=27% Similarity=0.361 Sum_probs=250.7
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+|+++++++|+.|+..........+|.++|+|++|+|+++|++++++++||+|++.+..+|+.|.+|+++++++|.....
T Consensus 29 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (344)
T cd08284 29 IVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL 108 (344)
T ss_pred EEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc
Confidence 57899999999996554333334457899999999999999999999999999999889999999999999999987533
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
... .+ ....+|++++|+.++.+ .++++|+++++++++++++++.|||+++. ..++.+|+
T Consensus 109 ~~~--------------~~----~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~ 169 (344)
T cd08284 109 FGY--------------AG----SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGD 169 (344)
T ss_pred ccc--------------cc----cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCC
Confidence 210 00 01124799999999965 99999999999999999999999999975 47889999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
+|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .++.+..+ +.+.+.+.+++ ++|++||++++.
T Consensus 170 ~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~l~~~~~~~~~dvvid~~~~~ 246 (344)
T cd08284 170 TVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAE--PVERVREATEGRGADVVLEAVGGA 246 (344)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcC--HHHHHHHHhCCCCCCEEEECCCCH
Confidence 999998899999999999999975788888899999999999975 45555444 77788887776 899999999987
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
..+..++++++++ |+++.+|..............+.+++++.+... ...+.++++++++.++++.+.+++++.+++
T Consensus 247 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 322 (344)
T cd08284 247 AALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC---PVRSLFPELLPLLESGRLDLEFLIDHRMPL 322 (344)
T ss_pred HHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEecC---CcchhHHHHHHHHHcCCCChHHhEeeeecH
Confidence 7899999999997 999999966422111111222456666654321 123679999999999988776556789999
Q ss_pred CcHHHHHHHHhcCCcceEEEe
Q 019414 318 SEINKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~~k~vl~ 338 (341)
++++++++.+.+++..|+|++
T Consensus 323 ~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 323 EEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred HHHHHHHHHHhcCCceEEEec
Confidence 999999999887766788875
No 43
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.8e-38 Score=293.96 Aligned_cols=332 Identities=31% Similarity=0.477 Sum_probs=261.3
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCC---CCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSD---LEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~ 77 (341)
+||+.++++|+.|+.......+..+|.++|||++|+|+.+|+++++ +++||+|++.+..+|+.|.+|..+.+++|++
T Consensus 29 ~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 108 (367)
T cd08263 29 LIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCED 108 (367)
T ss_pred EEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcC
Confidence 4789999999999765443333467889999999999999999988 9999999999899999999999999999998
Q ss_pred ccccCcccccccCCCccc-ccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 78 LRINPVRGVMLADGQSRF-SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
..++...+-..-+|.+.+ .-.+..++ ....|++++|+.++.+.++++|+++++.+++.++.++.|||+++.+...+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~ 187 (367)
T cd08263 109 FFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRP 187 (367)
T ss_pred ccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCC
Confidence 764432221110111111 11111110 0124799999999999999999999999999999999999999888888899
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
+++|||+|+|.+|++++++|+.+|+..+++++.++++.+.++++|++.+++.++.+ +.+.++..+++ ++|++||+++
T Consensus 188 g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~~d~vld~vg 265 (367)
T cd08263 188 GETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKED--AVAAIREITGGRGVDVVVEALG 265 (367)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCccc--HHHHHHHHhCCCCCCEEEEeCC
Confidence 99999998899999999999999995588888999999999999999999887665 77788887765 8999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCccccccccee-eecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
+...++.++++++++ |+++.++..............+ .+++++.++.. ..+.+.++.+++++.++.+.+.+.+++.
T Consensus 266 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~~l~~~~~~~~~ 342 (367)
T cd08263 266 KPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG--ARPRQDLPELVGLAASGKLDPEALVTHK 342 (367)
T ss_pred CHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC--CCcHHHHHHHHHHHHcCCCCcccceeEE
Confidence 854889999999998 9999998654321112211222 46777766432 2223468889999999988776667789
Q ss_pred ecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 315 IPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
++++++.++++.+.+++. +|+|+.
T Consensus 343 ~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 343 YKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred ecHHHHHHHHHHHhcCCccceeeeC
Confidence 999999999999988875 488863
No 44
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.6e-38 Score=291.79 Aligned_cols=310 Identities=30% Similarity=0.406 Sum_probs=254.8
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||++++++|+.|+....... ...+|.++|||++|+|+++|++++++++||+|++.+...|++|++|..+.++.|....
T Consensus 29 ~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (345)
T cd08286 29 IVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGG 108 (345)
T ss_pred EEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcc
Confidence 478999999999965533222 2245789999999999999999999999999999999999999999999999998752
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
.. .+ ....|+|++|+.++.+ .++++|++++..+++.+++.+.+||+++....++.+|
T Consensus 109 ~~-----------~~----------~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g 167 (345)
T cd08286 109 WI-----------LG----------NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPG 167 (345)
T ss_pred cc-----------cc----------cccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCC
Confidence 21 00 1123799999999987 8999999999999999999999999987778889999
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
++|||.|+|++|++++|+|+.+|..+|+++++++++.+.++++|++.++++.+.+ +.+.+...+++ ++|++|||+|.
T Consensus 168 ~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~ 245 (345)
T cd08286 168 DTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVDVVIEAVGI 245 (345)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccccc--HHHHHHHHhCCCCCCEEEECCCC
Confidence 9999998899999999999999944888898999999999999999999887655 77777777776 89999999988
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
...++.+++.++++ |+++.+|.......+++. ..+.+++++.+.... ...++.++++++++.+.+.+++++.++
T Consensus 246 ~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~ 319 (345)
T cd08286 246 PATFELCQELVAPG-GHIANVGVHGKPVDLHLE-KLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFK 319 (345)
T ss_pred HHHHHHHHHhccCC-cEEEEecccCCCCCcCHH-HHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEee
Confidence 77899999999998 999999865433223221 125577877764322 145888999999998877666789999
Q ss_pred CCcHHHHHHHHhcCC---cceEEEec
Q 019414 317 FSEINKAFEYMVKGE---GLRCIISM 339 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~---~~k~vl~~ 339 (341)
+++++++++.+.... ..|++|++
T Consensus 320 l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 320 LSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 999999999998763 45999865
No 45
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3.3e-38 Score=290.43 Aligned_cols=304 Identities=26% Similarity=0.373 Sum_probs=252.5
Q ss_pred CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|+....... ...+|.++|+|++|+|+++|+++.++++||+|++.+..+|+.|..|+.+..++|.
T Consensus 29 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 108 (340)
T cd05284 29 LVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCE 108 (340)
T ss_pred EEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCC
Confidence 478999999999866532221 2346889999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh-cCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV-AKPE 155 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~ 155 (341)
+..+.+ ....|+|++|+.+++++++++|+++++++++++++.+.|||+++.+. ..+.
T Consensus 109 ~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~ 166 (340)
T cd05284 109 NARFPG----------------------IGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLD 166 (340)
T ss_pred CCcccC----------------------ccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCC
Confidence 876631 11247999999999999999999999999999999999999998766 4688
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 233 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~ 233 (341)
++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++++++. +.+.+++.+.+ ++|+++|+
T Consensus 167 ~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~i~~~~~~~~~dvvld~ 242 (340)
T cd05284 167 PGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASDD---VVEEVRELTGGRGADAVIDF 242 (340)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCcc---HHHHHHHHhCCCCCCEEEEc
Confidence 9999999999889999999999999 6 88888889999999999999988887653 66778777776 89999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 313 (341)
+|+...++.++++++++ |+++.+|.... ..++.. ..+.+++++.++..... ..++.++++++++.+.+ ..+
T Consensus 243 ~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~g~l~~---~~~ 313 (340)
T cd05284 243 VGSDETLALAAKLLAKG-GRYVIVGYGGH-GRLPTS-DLVPTEISVIGSLWGTR---AELVEVVALAESGKVKV---EIT 313 (340)
T ss_pred CCCHHHHHHHHHHhhcC-CEEEEEcCCCC-CccCHH-HhhhcceEEEEEecccH---HHHHHHHHHHHhCCCCc---ceE
Confidence 99877899999999998 99999986543 222221 12457888877654322 56889999999998764 357
Q ss_pred eecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 314 RIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 314 ~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
.|+++++++|++.+.+++. .|+|+.+
T Consensus 314 ~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 314 KFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred EEeHHHHHHHHHHHHcCCccceEEecC
Confidence 8999999999999988876 4888754
No 46
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5.4e-38 Score=289.19 Aligned_cols=308 Identities=26% Similarity=0.392 Sum_probs=247.2
Q ss_pred CccccccCCcCcceeeeccC----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||++++++|+.|....... ....+|+++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+.+++|+|+
T Consensus 29 lV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 108 (341)
T PRK05396 29 LIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCR 108 (341)
T ss_pred EEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCC
Confidence 58899999999996532221 12246789999999999999999999999999999999999999999999999998
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
..++.. ...+|+|++|+.++.+.++++|+++++++++. ...+.++++++.. ...+
T Consensus 109 ~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~~--~~~~ 163 (341)
T PRK05396 109 NTKGVG----------------------VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTALS--FDLV 163 (341)
T ss_pred Ccceee----------------------ecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHHHc--CCCC
Confidence 754321 11247999999999999999999999888774 3566666665443 3468
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
|++|+|.|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++++++.+ +.+.++..+.+ ++|++|||.|
T Consensus 164 g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~d~v~d~~g 241 (341)
T PRK05396 164 GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSG 241 (341)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHHHhcCCCCCCEEEECCC
Confidence 99999998899999999999999986688888899999999999999999887655 77888887765 8999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
+...++.++++++++ |+++.+|.......+.+ .....+++++.++.... ..+.+..+++++.++ +.+.+.+++.+
T Consensus 242 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~ 316 (341)
T PRK05396 242 APSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE--MFETWYKMSALLQSG-LDLSPIITHRF 316 (341)
T ss_pred CHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC--ccchHHHHHHHHHcC-CChhHheEEEE
Confidence 878899999999998 99999987544333332 23345677777654221 124566788889888 54555577999
Q ss_pred cCCcHHHHHHHHhcCCcceEEEecC
Q 019414 316 PFSEINKAFEYMVKGEGLRCIISME 340 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~~~k~vl~~~ 340 (341)
+++++++|++.+.+++.+|++++|+
T Consensus 317 ~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 317 PIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred eHHHHHHHHHHHhcCCCceEEEecC
Confidence 9999999999998877669999875
No 47
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=5.4e-38 Score=291.70 Aligned_cols=309 Identities=25% Similarity=0.391 Sum_probs=244.1
Q ss_pred CccccccCCcCcceeeeccC---C-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG---Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~---~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|....... . ...+|.++|||++|+|+++|+++++|++||+|++.+..+|+.|++|+++.+++|.
T Consensus 45 ~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~ 124 (364)
T PLN02702 45 RVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCP 124 (364)
T ss_pred EEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCC
Confidence 57899999999996553221 1 2235789999999999999999999999999999999999999999999999998
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
+..+.. .....|+|++|++++.+.++++|+++++++++. ..++.++++++ ...++.+
T Consensus 125 ~~~~~~---------------------~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~ 181 (364)
T PLN02702 125 EMKFFA---------------------TPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGP 181 (364)
T ss_pred CccccC---------------------CCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCC
Confidence 643210 001247999999999999999999999988775 23455678775 6788999
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH---hcCCccEEEec
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---TNGGVDRSVEC 233 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~---~~~~~d~vld~ 233 (341)
+++|+|+|+|++|++++++|+.+|+..++++++++++.+.++++|++.++++...+.++.+.+..+ +++++|++||+
T Consensus 182 g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 261 (364)
T PLN02702 182 ETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDC 261 (364)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEEC
Confidence 999999998999999999999999977889989999999999999988776543222366666554 23489999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 313 (341)
+|++..+..++++++++ |+++.+|.......+.. .....+++++.++.... ..++.++++++++++.+.+.+++
T Consensus 262 ~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~ 335 (364)
T PLN02702 262 VGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPL-TPAAAREVDVVGVFRYR----NTWPLCLEFLRSGKIDVKPLITH 335 (364)
T ss_pred CCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcccH-HHHHhCccEEEEeccCh----HHHHHHHHHHHcCCCCchHheEE
Confidence 99778899999999998 99999986533211111 12345777887765322 46888999999998876556678
Q ss_pred eecC--CcHHHHHHHHhcCCc-ceEEEe
Q 019414 314 RIPF--SEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 314 ~~~~--~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
.|++ +++++|++.+.+++. .|+|+.
T Consensus 336 ~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 336 RFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 8666 799999999987765 598885
No 48
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1e-38 Score=289.62 Aligned_cols=274 Identities=18% Similarity=0.198 Sum_probs=210.8
Q ss_pred CccccccCCcC-cceeeeccCC--C--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCC
Q 019414 1 MLSQKHNSFNP-RNFVFGFQGQ--T--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 75 (341)
Q Consensus 1 ~~~~~~~~~n~-~~~~~~~~~~--~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c 75 (341)
|||++++|+|+ +|+.+..... . ..+|.++|||++|+|+++|+++ +|++||||++. |..|.+|..+
T Consensus 29 lVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~~----- 98 (308)
T TIGR01202 29 VVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVRG----- 98 (308)
T ss_pred EEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Cccccccccc-----
Confidence 68999999985 6754322211 1 2579999999999999999998 69999999974 2334332211
Q ss_pred ccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC
Q 019414 76 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 155 (341)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 155 (341)
..|+|+||++++++.++++|++++++. +.+ ..+.|||+++.+ . ..
T Consensus 99 -------------------------------~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~ 143 (308)
T TIGR01202 99 -------------------------------LFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EV 143 (308)
T ss_pred -------------------------------cCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-cc
Confidence 127999999999999999999999764 444 457899998744 3 34
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
++++++|+|+|++|++++|+||.+|++.|++++.++++++.++++ .++|+.+. .+.++|++|||+|
T Consensus 144 ~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-----------~~~g~Dvvid~~G 209 (308)
T TIGR01202 144 KVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-----------PRRDYRAIYDASG 209 (308)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-----------cCCCCCEEEECCC
Confidence 689999999999999999999999997788888888877766543 34444221 1237999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
++..+++++++++++ |+++++|.......+++. ..+.+++++.++..+.. +++++++++++++++.+.++++++|
T Consensus 210 ~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~g~i~~~~~it~~~ 284 (308)
T TIGR01202 210 DPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFV-PAFMKEARLRIAAEWQP---GDLHAVRELIESGALSLDGLITHQR 284 (308)
T ss_pred CHHHHHHHHHhhhcC-cEEEEEeecCCCcccccc-hhhhcceEEEEecccch---hHHHHHHHHHHcCCCChhhccceee
Confidence 977899999999998 999999976543333332 23467788887654332 5799999999999999888899999
Q ss_pred cCCcHHHHHHHHhcCC-cceEEEe
Q 019414 316 PFSEINKAFEYMVKGE-GLRCIIS 338 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~-~~k~vl~ 338 (341)
+|+|+++|++.+.+++ .+|++|+
T Consensus 285 ~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 285 PASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cHHHHHHHHHHHhcCcCceEEEeC
Confidence 9999999999876654 4698874
No 49
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.6e-38 Score=289.92 Aligned_cols=308 Identities=29% Similarity=0.477 Sum_probs=247.8
Q ss_pred CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||++++++|+.|......+. ...+|.++|+|++|+|+++|++++++++||+|++.+..+|+.|++|+.+.+++|.
T Consensus 26 lV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 105 (343)
T cd05285 26 LVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCP 105 (343)
T ss_pred EEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCc
Confidence 578999999999965322111 1235779999999999999999999999999999999999999999999999998
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...+... ....|+|++|++++++.++++|+++++++++.+ .++.+|++++ ..+++++
T Consensus 106 ~~~~~~~---------------------~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~ 162 (343)
T cd05285 106 DMRFAAT---------------------PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRP 162 (343)
T ss_pred Ccccccc---------------------ccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCC
Confidence 6533110 002379999999999999999999999998776 5788999985 7889999
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh-hHHHHHHHHhcC-CccEEEecc
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR-PIQEVIAEMTNG-GVDRSVECT 234 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~i~~~~~~-~~d~vld~~ 234 (341)
|++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.++++++.+. .+.+.+++.+.+ ++|++|||+
T Consensus 163 g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 242 (343)
T cd05285 163 GDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECT 242 (343)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECC
Confidence 999999988999999999999999955899989999999999999999988776541 136677777776 899999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
|+...++..+++++++ |+++.+|........++. ....+++.+.++.... +.+++++++++++.+.+.+.+++.
T Consensus 243 g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~ 316 (343)
T cd05285 243 GAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRYA----NTYPTAIELLASGKVDVKPLITHR 316 (343)
T ss_pred CCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccCh----HHHHHHHHHHHcCCCCchHhEEEE
Confidence 9866889999999998 999999865432222211 1234566666554222 568889999999987655556789
Q ss_pred ecCCcHHHHHHHHhcCC-c-ceEEE
Q 019414 315 IPFSEINKAFEYMVKGE-G-LRCII 337 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~-~-~k~vl 337 (341)
|+++++++|++.+.+++ . +|++|
T Consensus 317 ~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 317 FPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 99999999999998875 3 69987
No 50
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=4.8e-38 Score=293.86 Aligned_cols=310 Identities=27% Similarity=0.384 Sum_probs=247.1
Q ss_pred CccccccCCcCcceeeecc---C-----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQ---G-----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVS 72 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~---~-----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~ 72 (341)
+||++++++|+.|...... + ...++|.++|||++|+|+++|++++.|++||+|++.+..+|+.|++|+++++
T Consensus 55 ~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~ 134 (384)
T cd08265 55 LIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSP 134 (384)
T ss_pred EEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCc
Confidence 4789999999998554321 1 1235688999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCC-------Cchhhhhccccchhhh
Q 019414 73 NMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA-------PLDKVCILSCGVSTGL 145 (341)
Q Consensus 73 ~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~-------~~~~aa~l~~~~~ta~ 145 (341)
++|...... ++. ..|+|++|++++++.++++|+++ +.+ +|+++.++++||
T Consensus 135 ~~~~~~~~~------------g~~----------~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~ 191 (384)
T cd08265 135 NHCKNLKEL------------GFS----------ADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAY 191 (384)
T ss_pred ccCCCccee------------eec----------CCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHH
Confidence 999874321 111 13699999999999999999864 344 667778899999
Q ss_pred hhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC-ChhHHHHHHHHh
Q 019414 146 GATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQEVIAEMT 223 (341)
Q Consensus 146 ~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~i~~~~ 223 (341)
+++... .++++|++|||+|+|++|++++++|+..|+..|+++++++++.+.++++|++.++++++. +..+.+.+++.+
T Consensus 192 ~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~ 271 (384)
T cd08265 192 NGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT 271 (384)
T ss_pred HHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc
Confidence 998666 689999999999889999999999999998779999899999999999999988887643 123777888888
Q ss_pred cC-CccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHH
Q 019414 224 NG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 301 (341)
Q Consensus 224 ~~-~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 301 (341)
++ ++|+++|+.|++ ..+++++++++++ |+++.+|.......+.. .....++.++.++.... ....+++++++++
T Consensus 272 ~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~ 347 (384)
T cd08265 272 KGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATTVPLHL-EVLQVRRAQIVGAQGHS--GHGIFPSVIKLMA 347 (384)
T ss_pred CCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCCCcccH-HHHhhCceEEEEeeccC--CcchHHHHHHHHH
Confidence 77 899999999863 4778999999997 99999986543222211 12233455666654221 1246899999999
Q ss_pred CCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEE
Q 019414 302 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337 (341)
Q Consensus 302 ~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl 337 (341)
++.+.+..++++.|+++++++|++.+.++...|+|+
T Consensus 348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 348 SGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 998876655778999999999999987765567775
No 51
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=7.6e-38 Score=289.22 Aligned_cols=307 Identities=25% Similarity=0.357 Sum_probs=252.5
Q ss_pred CccccccCCcCcceeeeccCC-------------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhh
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-------------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC 67 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-------------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c 67 (341)
+|++.++++|+.|+....... ...+|.++|||++|+|+++|++++++++||+|++.+..+|+.|++|
T Consensus 29 ~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~ 108 (350)
T cd08240 29 LVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVC 108 (350)
T ss_pred EEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHH
Confidence 578999999999865432211 2235788999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhh
Q 019414 68 RSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 147 (341)
Q Consensus 68 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 147 (341)
.++++++|....+.. ....|++++|+.++.+.++++|+++++.+++.+++.+.|||++
T Consensus 109 ~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~ 166 (350)
T cd08240 109 LAGDENLCAKGRALG----------------------IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSA 166 (350)
T ss_pred HCcCcccCCCCCcee----------------------eeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHH
Confidence 999999997753310 0123799999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV 227 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~ 227 (341)
+.....+.++++|+|+|+|.+|++++|+|+..|++.|+++++++++.+.++++|++.+++.++.+ +.+.+.+..++++
T Consensus 167 ~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~ 244 (350)
T cd08240 167 VKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD--AAKRIIKAAGGGV 244 (350)
T ss_pred HHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCcc--HHHHHHHHhCCCC
Confidence 87766677899999998899999999999999997888898999999999999998888776554 6667776665589
Q ss_pred cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCC
Q 019414 228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 307 (341)
Q Consensus 228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 307 (341)
|++||++|....+..++++++++ |+++.+|........+.... ..+++++.+...... +++++++++++++.+.+
T Consensus 245 d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~ll~~~~i~~ 319 (350)
T cd08240 245 DAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVGSL---EELRELVALAKAGKLKP 319 (350)
T ss_pred cEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccCCH---HHHHHHHHHHHcCCCcc
Confidence 99999998778899999999998 99999986544322332222 337777777665443 56888999999997764
Q ss_pred CCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 308 EKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 308 ~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
. ....+++++++++++.+.+++. .|++++
T Consensus 320 ~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 320 I--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred c--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 3 4678999999999999988775 488875
No 52
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.8e-37 Score=286.09 Aligned_cols=309 Identities=26% Similarity=0.368 Sum_probs=253.4
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||+.++++|+.|+....... ...+|.++|+|++|+|+.+|++++.+++||+|++.+..+|++|++|+.|..|+|....
T Consensus 29 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (345)
T cd08260 29 VVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV 108 (345)
T ss_pred EEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCc
Confidence 478899999999865533222 2346889999999999999999999999999998777899999999999999999853
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
.. +....|+|++|++++.. .++++|++++.++++.++.++.|||+++.+..++.++
T Consensus 109 ~~----------------------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~ 166 (345)
T cd08260 109 QP----------------------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPG 166 (345)
T ss_pred cc----------------------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCC
Confidence 21 01123799999999975 9999999999999999999999999998778889999
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEeccCC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
++|+|+|+|++|++++++|+.+|+ .|+++.+++++.+.++++|++.+++.++ .+ +.+.+..+..+++|++||++|+
T Consensus 167 ~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~ 243 (345)
T cd08260 167 EWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASEVED--VAAAVRDLTGGGAHVSVDALGI 243 (345)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccccchh--HHHHHHHHhCCCCCEEEEcCCC
Confidence 999999999999999999999999 8888889999999999999999988876 44 6677777766689999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcc-ccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
...+..++++++++ |+++.+|....... ..+.. ..+.+++++.+..... ...++.++++++++++.+.+.+++.
T Consensus 244 ~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~i~~~~~~~~~ 319 (345)
T cd08260 244 PETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP---AHRYDAMLALIASGKLDPEPLVGRT 319 (345)
T ss_pred HHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC---HHHHHHHHHHHHcCCCChhhheeEE
Confidence 67889999999998 99999986543321 11211 1235677777655432 2578899999999988776556789
Q ss_pred ecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414 315 IPFSEINKAFEYMVKGEGL-RCIIS 338 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~~-k~vl~ 338 (341)
++++++++|++.+.+++.. |+|++
T Consensus 320 ~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 320 ISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred ecHHHHHHHHHHHHcCCCCceEEec
Confidence 9999999999999887754 77754
No 53
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.4e-37 Score=291.73 Aligned_cols=307 Identities=18% Similarity=0.239 Sum_probs=246.2
Q ss_pred CccccccCCcCcceeeeccCC---------C--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ---------T--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS 69 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~---------~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~ 69 (341)
|||+.++++|+.|........ . ...+.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|.+
T Consensus 46 lI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 125 (393)
T cd08246 46 LVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAG 125 (393)
T ss_pred EEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccc
Confidence 578999999988854422210 0 11235899999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh
Q 019414 70 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 149 (341)
Q Consensus 70 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~ 149 (341)
+..++|....++. + ....|+|++|++++...++++|+++++++++.+++++.|||+++.
T Consensus 126 ~~~~~~~~~~~~g------------~---------~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~ 184 (393)
T cd08246 126 GDPMFDPSQRIWG------------Y---------ETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLF 184 (393)
T ss_pred ccccccccccccc------------c---------cCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHh
Confidence 9999998754431 0 012479999999999999999999999999999999999999976
Q ss_pred hh--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC--------------
Q 019414 150 NV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-------------- 212 (341)
Q Consensus 150 ~~--~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-------------- 212 (341)
.. +++++|++|+|+|+ |++|++++++|+.+|+ .++++++++++.+.++++|++.++++++.+
T Consensus 185 ~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~ 263 (393)
T cd08246 185 GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYT 263 (393)
T ss_pred hcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhh
Confidence 54 68899999999997 9999999999999999 677788899999999999999888864421
Q ss_pred ------hhHHHHHHHHhcC--CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEee
Q 019414 213 ------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTF 283 (341)
Q Consensus 213 ------~~~~~~i~~~~~~--~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~ 283 (341)
..+.+.+.+++++ ++|++||++|+ ..+..++++++++ |+++.+|..... ..++. ...+.++.++.++.
T Consensus 264 ~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~l~~~~~~i~g~~ 340 (393)
T cd08246 264 AWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDRG-GMVVICAGTTGYNHTYDN-RYLWMRQKRIQGSH 340 (393)
T ss_pred hhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhccC-CEEEEEcccCCCCCCCcH-HHHhhheeEEEecc
Confidence 1255677777775 69999999987 7789999999998 999999864332 11222 22245666777765
Q ss_pred ecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcC-Cc-ceEEE
Q 019414 284 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-EG-LRCII 337 (341)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~-~~-~k~vl 337 (341)
...+ +.++.++++++++.+.+ .++++|+++++++|++.+.++ +. +|+++
T Consensus 341 ~~~~---~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 341 FAND---REAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred cCcH---HHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 5433 46888999999997763 367899999999999999887 54 47765
No 54
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3e-37 Score=284.63 Aligned_cols=309 Identities=26% Similarity=0.359 Sum_probs=249.9
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|+...........|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|..+..++|.+..+
T Consensus 29 ~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (345)
T cd08287 29 VIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF 108 (345)
T ss_pred EEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc
Confidence 47899999999995554332223458899999999999999999999999999986677899999999999999997544
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhh-----hhccccchhhhhhhhhhcC
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKV-----CILSCGVSTGLGATLNVAK 153 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~a-----a~l~~~~~ta~~~l~~~~~ 153 (341)
+. ....|+|++|+.++.+ .++++|++++++.+ +++...+.+|++++ +..+
T Consensus 109 ~~----------------------~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~ 165 (345)
T cd08287 109 WG----------------------AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAG 165 (345)
T ss_pred cc----------------------CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcC
Confidence 31 1123799999999974 99999999987221 12336788899986 4678
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEe
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 232 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld 232 (341)
+.+|++|+|.|+|++|++++|+|+..|++.++++++++++.+.++++|++.++++...+ +.+.+.+.+++ ++|+++|
T Consensus 166 ~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~--~~~~i~~~~~~~~~d~il~ 243 (345)
T cd08287 166 VRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE--AVARVRELTGGVGADAVLE 243 (345)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc--HHHHHHHhcCCCCCCEEEE
Confidence 99999999998899999999999999997799999899899999999999999887655 77788887776 8999999
Q ss_pred ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCcee
Q 019414 233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312 (341)
Q Consensus 233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 312 (341)
++|++..++.++++++++ |+++.++.......++.. ..+.+++++.+..... ...++++++++.++.+.+.++++
T Consensus 244 ~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~ 318 (345)
T cd08287 244 CVGTQESMEQAIAIARPG-GRVGYVGVPHGGVELDVR-ELFFRNVGLAGGPAPV---RRYLPELLDDVLAGRINPGRVFD 318 (345)
T ss_pred CCCCHHHHHHHHHhhccC-CEEEEecccCCCCccCHH-HHHhcceEEEEecCCc---HHHHHHHHHHHHcCCCCHHHhEE
Confidence 998878999999999997 999999865532222221 3356788887643222 25788999999999887665567
Q ss_pred eeecCCcHHHHHHHHhcCCcceEEEec
Q 019414 313 HRIPFSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 313 ~~~~~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
+.++++++++|++.+.+++..|++|++
T Consensus 319 ~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 319 LTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred eeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 899999999999999887777999864
No 55
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7e-38 Score=288.70 Aligned_cols=282 Identities=20% Similarity=0.253 Sum_probs=228.5
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccc--cceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGH--EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~ 77 (341)
|||++++++||.|+....... ...+|.++|+ |++|+|..+|+++++|++||+|+..
T Consensus 47 lVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------- 105 (348)
T PLN03154 47 LVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI--------------------- 105 (348)
T ss_pred EEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------
Confidence 689999999998865432111 1235889998 8899999999999999999999855
Q ss_pred ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCc--eEE--CCCCCCch-hhhhccccchhhhhhhhhhc
Q 019414 78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVA 152 (341)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~~l~~~~ 152 (341)
|+|+||+.++.+. +++ +|++++++ +||++++++.|||+++.+..
T Consensus 106 -------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~ 154 (348)
T PLN03154 106 -------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVC 154 (348)
T ss_pred -------------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhc
Confidence 5899999999754 544 59999986 68899999999999988888
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCC-ChhHHHHHHHHhcCCccE
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~~~i~~~~~~~~d~ 229 (341)
++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++ ++|++.++++.+. + +.+.+++.+++++|+
T Consensus 155 ~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvD~ 231 (348)
T PLN03154 155 SPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPD--LDAALKRYFPEGIDI 231 (348)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCccc--HHHHHHHHCCCCcEE
Confidence 9999999999987 9999999999999999 7999989999999987 7999999988643 4 777787777668999
Q ss_pred EEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc-c---c-cccceeeecceEEEeeecCCC--CCCCHHHHHHHHHC
Q 019414 230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-F---M-TKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMN 302 (341)
Q Consensus 230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~---~-~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~ 302 (341)
+||++|+ ..++.++++++++ |+++.+|....... . . .....+.+++++.|+....+. ..+.++++++++++
T Consensus 232 v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~ 309 (348)
T PLN03154 232 YFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQ 309 (348)
T ss_pred EEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHC
Confidence 9999987 6889999999998 99999997543211 0 0 111235578888887654321 11357789999999
Q ss_pred CCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414 303 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 341 (341)
Q Consensus 303 ~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~ 341 (341)
|++.+. ++..|+|+++++|++.+.+++. +|+|+++.+
T Consensus 310 G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 310 GKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred CCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 988653 5678999999999999999886 599998753
No 56
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.1e-37 Score=288.76 Aligned_cols=319 Identities=24% Similarity=0.325 Sum_probs=247.1
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||++++++|+.|+..........+|+++|||++|+|+++|++++.+++||+|++.+..+|+.|++|++++.++|.....
T Consensus 29 lv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~ 108 (375)
T cd08282 29 IVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNP 108 (375)
T ss_pred EEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCc
Confidence 57899999999997664333334568999999999999999999999999999999999999999999999999986211
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCch---hhhhccccchhhhhhhhhhcCCC
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLD---KVCILSCGVSTGLGATLNVAKPE 155 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~ 155 (341)
. - .++ .+..-+ .....|+|+||++++.+ .++++|++++++ +++.+++++.|||+++ ...+++
T Consensus 109 ~-~-----~~~--~~~~~~----~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~ 175 (375)
T cd08282 109 G-R-----AGG--AYGYVD----MGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQ 175 (375)
T ss_pred c-c-----ccc--cccccc----cCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCC
Confidence 0 0 000 000000 01124799999999976 899999999998 5678888999999997 778999
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+|++|+|.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+. .+++++.+ +.+.+.+.+++++|++|||+|
T Consensus 176 ~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~--~~~~i~~~~~~~~d~v~d~~g 252 (375)
T cd08282 176 PGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGD--PVEQILGLEPGGVDRAVDCVG 252 (375)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCccc--HHHHHHHhhCCCCCEEEECCC
Confidence 999999998899999999999999986788899999999999999984 56665544 777777777668999999998
Q ss_pred ChH-----------HHHHHHHHhcCCCcEEEEEccCCCCcc-----------cccc-cceeeecceEEEeeecCCCCCCC
Q 019414 236 NID-----------NMISAFECVHDGWGVAVLVGVPSKDAV-----------FMTK-PINVLNERTLKGTFFGNYKPRTD 292 (341)
Q Consensus 236 ~~~-----------~~~~~~~~l~~~~g~~v~~g~~~~~~~-----------~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 292 (341)
... .+..++++++++ |+++.+|....... ..+. ...+.++..+.+.... ....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 328 (375)
T cd08282 253 YEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP---VKKY 328 (375)
T ss_pred CcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCC---chhh
Confidence 742 588999999998 99998876432110 0011 1112344444443321 2256
Q ss_pred HHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414 293 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 293 ~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
++.++++++++++.+..++++.+++++++++++.+.+++..|+|+++
T Consensus 329 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 329 NRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred HHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 88899999999887655578999999999999999888755888763
No 57
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-36 Score=280.10 Aligned_cols=308 Identities=28% Similarity=0.404 Sum_probs=245.5
Q ss_pred CccccccCCcCcceeeecc----CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQ----GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~----~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|...... .....+|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|++|..+.+|+|.
T Consensus 29 ~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 108 (341)
T cd05281 29 LIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQ 108 (341)
T ss_pred EEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCc
Confidence 4789999999998654211 112235778999999999999999999999999999999999999999999999998
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...+.. ....|+|++|++++.+.++++|++++.+ +++++..+.++++++. ....+
T Consensus 109 ~~~~~~----------------------~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~~~--~~~~~ 163 (341)
T cd05281 109 NTKILG----------------------VDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHTVL--AGDVS 163 (341)
T ss_pred ccceEe----------------------ccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHHHH--hcCCC
Confidence 653311 1124799999999999999999999985 4567777888888764 45578
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
|++|||+|+|.+|++++|+|+.+|..+|++++++++|.+.++++|++.+++.++.+ +. .+++.+++ ++|++||++|
T Consensus 164 g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~vd~vld~~g 240 (341)
T cd05281 164 GKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED--VV-EVKSVTDGTGVDVVLEMSG 240 (341)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccccc--HH-HHHHHcCCCCCCEEEECCC
Confidence 99999998899999999999999986688888899999999999998888876555 66 77777776 9999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
+.....+++++++++ |+++.++.......+.+......+++.+.+.... ...+.++.+++++.++.+.+.+.++..+
T Consensus 241 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 317 (341)
T cd05281 241 NPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSALLKSGKVDLSPVITHKL 317 (341)
T ss_pred CHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--CcchhHHHHHHHHHcCCCChhHheEEEe
Confidence 877889999999998 9999998654322222222234466666655421 1224678899999999887666677889
Q ss_pred cCCcHHHHHHHHhcCCcceEEEec
Q 019414 316 PFSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
++++++++++.+.+++..|+|+++
T Consensus 318 ~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 318 PLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred cHHHHHHHHHHHhcCCCceEEecC
Confidence 999999999999888755988764
No 58
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.4e-36 Score=279.94 Aligned_cols=308 Identities=28% Similarity=0.451 Sum_probs=249.4
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+|+++++++|+.|+....... ...+|.++|+|++|+|+++|++++.+++||+|++.+..+|++|++|..+..++|....
T Consensus 28 ~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (343)
T cd08235 28 LVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYK 107 (343)
T ss_pred EEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcc
Confidence 578999999999965532222 2345789999999999999999999999999999999999999999999999998864
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCc-----eEECCCCCCchhhhhccccchhhhhhhhhhcCC
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 154 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~-----~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 154 (341)
+.. ....|+|++|++++.+. ++++|+++++.+++.+ .++.+||+++.. .++
T Consensus 108 ~~~----------------------~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~-~~~ 163 (343)
T cd08235 108 KFG----------------------NLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRK-AGI 163 (343)
T ss_pred eec----------------------cCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHh-cCC
Confidence 320 11247999999999999 9999999999998766 788999999754 589
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 233 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~ 233 (341)
++|++|||+|+|.+|++++++|+..|++.|+++++++++.+.++++|++.++++++.+ +.+.++..+++ ++|++||+
T Consensus 164 ~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~vd~vld~ 241 (343)
T cd08235 164 KPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED--LVEKVRELTDGRGADVVIVA 241 (343)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccC--HHHHHHHHhCCcCCCEEEEC
Confidence 9999999998899999999999999994488888999999999999998888887665 88888887776 89999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCcee
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 312 (341)
+++...+..++++++++ |+++.++........... .....+++.+.++..... +.++.++++++++.+.+.+.+.
T Consensus 242 ~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~ 317 (343)
T cd08235 242 TGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASP---EDYKEALELIASGKIDVKDLIT 317 (343)
T ss_pred CCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCCh---hhHHHHHHHHHcCCCChHHhee
Confidence 98767889999999998 999999864332111111 112335666655543322 5688899999999887644567
Q ss_pred eeecCCcHHHHHHHHhcCCcceEEEe
Q 019414 313 HRIPFSEINKAFEYMVKGEGLRCIIS 338 (341)
Q Consensus 313 ~~~~~~~i~ea~~~~~~~~~~k~vl~ 338 (341)
..|++++++++++.+.+++..|+|++
T Consensus 318 ~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 318 HRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred eEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 88999999999999988874488763
No 59
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.2e-37 Score=280.97 Aligned_cols=298 Identities=19% Similarity=0.266 Sum_probs=236.1
Q ss_pred CccccccCCcCcceeeeccC------------CCCCCCccccccceEEEEEecCCCCC-CCCCCEEEecccCCCCCChhh
Q 019414 1 MLSQKHNSFNPRNFVFGFQG------------QTPLFPRIFGHEAAGVVESVGEGVSD-LEVGDHVLPVFTGECGDCRHC 67 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~------------~~~~~p~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~c~~c~~c 67 (341)
+||++++++|+.|+...... ....+|.++|+|++|+|+++|+++++ +++||+|++.+..+|+.|++|
T Consensus 27 ~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~ 106 (341)
T cd08262 27 LVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASC 106 (341)
T ss_pred EEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhh
Confidence 57899999999996543321 12235889999999999999999997 999999999999999999999
Q ss_pred cCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhh
Q 019414 68 RSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 147 (341)
Q Consensus 68 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 147 (341)
..+.. ....|+|+||++++.+.++++|+++++++++ ++.++++||++
T Consensus 107 ~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~ 153 (341)
T cd08262 107 GIGLS--------------------------------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA 153 (341)
T ss_pred hCCCC--------------------------------cCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence 33210 0023799999999999999999999998876 67788999998
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh--hHHHHHHHHhcC
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMTNG 225 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~i~~~~~~ 225 (341)
....++++|++|||+|+|++|++++|+|+.+|+..++++++++++.+.++++|++.++++++.+. .+. .+.....+
T Consensus 154 -~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~ 231 (341)
T cd08262 154 -VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARAGG 231 (341)
T ss_pred -HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHhCC
Confidence 57889999999999988999999999999999977888888999999999999988888765431 122 33444444
Q ss_pred -CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCC
Q 019414 226 -GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 304 (341)
Q Consensus 226 -~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 304 (341)
++|++||++|++..+..++++++++ |+++.+|........... ..+.+++++.++..... +.+++++++++++.
T Consensus 232 ~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~ 306 (341)
T cd08262 232 PKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEPA-LAIRKELTLQFSLGYTP---EEFADALDALAEGK 306 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCHH-HHhhcceEEEEEecccH---HHHHHHHHHHHcCC
Confidence 8999999998855788899999997 999999866433222111 11346666655432221 46889999999999
Q ss_pred CCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 305 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 305 i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
+.+.+.+++.+++++++++++.+.+++. .|+|++
T Consensus 307 i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 307 VDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 9876666799999999999999988875 488864
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.1e-36 Score=280.21 Aligned_cols=305 Identities=24% Similarity=0.380 Sum_probs=243.5
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||++++++|+.|+...........|.++|||++|+|+++|+++++|++||+|++.+. .+|+.|++|..+..++|.+..
T Consensus 29 lv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (338)
T PRK09422 29 LVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK 108 (338)
T ss_pred EEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCcc
Confidence 5789999999998544322222234789999999999999999999999999997654 479999999999999998764
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
... ....|+++||+.++...++++|+++++.++++++..+.|||+++ ..+.+++|++
T Consensus 109 ~~~----------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~ 165 (338)
T PRK09422 109 NAG----------------------YTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQW 165 (338)
T ss_pred ccC----------------------ccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCE
Confidence 321 11236999999999999999999999999999999999999996 7788999999
Q ss_pred EEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 160 VAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
|||+|+|++|++++++|+. .|+ .|+++++++++++.++++|++.++++.. .+ +.+.+++.++ ++|.++++.++.
T Consensus 166 vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~v~~~~~-~~d~vi~~~~~~ 241 (338)
T PRK09422 166 IAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKRVED--VAKIIQEKTG-GAHAAVVTAVAK 241 (338)
T ss_pred EEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccccccc--HHHHHHHhcC-CCcEEEEeCCCH
Confidence 9999999999999999998 498 8999999999999999999998888754 33 6667777665 688666555566
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
+.+..++++++++ |+++.+|.......++. .....++..+.++..... +.++.+++++.++++.. .+ ..+++
T Consensus 242 ~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~l~~--~v-~~~~~ 313 (338)
T PRK09422 242 AAFNQAVDAVRAG-GRVVAVGLPPESMDLSI-PRLVLDGIEVVGSLVGTR---QDLEEAFQFGAEGKVVP--KV-QLRPL 313 (338)
T ss_pred HHHHHHHHhccCC-CEEEEEeeCCCCceecH-HHHhhcCcEEEEecCCCH---HHHHHHHHHHHhCCCCc--cE-EEEcH
Confidence 8899999999998 99999986533222221 122345666666543222 46888999999997753 34 46899
Q ss_pred CcHHHHHHHHhcCCc-ceEEEecC
Q 019414 318 SEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
+++++|++.+.+++. +|+++++.
T Consensus 314 ~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 314 EDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHHcCCccceEEEecC
Confidence 999999999988776 49988765
No 61
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=5.6e-37 Score=281.98 Aligned_cols=307 Identities=21% Similarity=0.343 Sum_probs=245.9
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEE-ecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||+.++++|+.|+....... ...+|.++|||++|+|+++|+++++|++||+|+ .....+|++|++|+++..|+|...
T Consensus 28 lirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (337)
T cd05283 28 DIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKG 107 (337)
T ss_pred EEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcch
Confidence 578999999999866543222 235688999999999999999999999999998 455568999999999999999886
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+.. .|+... +....|+|+||+.++.+.++++|+++++++++.+++.+.+||+++.+ ..+++|+
T Consensus 108 ~~~~----------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~ 171 (337)
T cd05283 108 VVTY----------NGKYPD-----GTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVGPGK 171 (337)
T ss_pred hhcc----------cccccC-----CCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCCCCCC
Confidence 5431 000000 11234799999999999999999999999999999999999998644 5689999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+++|.|+|.+|++++++|+..|+ +++.+++++++.+.++++|++.+++....+ +.+. ..+++|++|||+|...
T Consensus 172 ~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~----~~~~~d~v~~~~g~~~ 244 (337)
T cd05283 172 RVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDPE--AMKK----AAGSLDLIIDTVSASH 244 (337)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcchh--hhhh----ccCCceEEEECCCCcc
Confidence 99998889999999999999999 889998999999999999999888776533 2221 2348999999999865
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
.+++++++++++ |+++.+|.......++. ...+.+++++.++..... +.++.+++++.++++.+ . .+.++++
T Consensus 245 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~--~-~~~~~~~ 316 (337)
T cd05283 245 DLDPYLSLLKPG-GTLVLVGAPEEPLPVPP-FPLIFGRKSVAGSLIGGR---KETQEMLDFAAEHGIKP--W-VEVIPMD 316 (337)
T ss_pred hHHHHHHHhcCC-CEEEEEeccCCCCccCH-HHHhcCceEEEEecccCH---HHHHHHHHHHHhCCCcc--c-eEEEEHH
Confidence 689999999998 99999987543322222 122457888888775543 57889999999998754 3 4789999
Q ss_pred cHHHHHHHHhcCCc-ceEEEe
Q 019414 319 EINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 319 ~i~ea~~~~~~~~~-~k~vl~ 338 (341)
++++|++.+.+++. +|+|++
T Consensus 317 ~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 317 GINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHcCCCcceEeeC
Confidence 99999999998886 488764
No 62
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.4e-36 Score=279.11 Aligned_cols=305 Identities=27% Similarity=0.418 Sum_probs=249.9
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|+++++++|+.|........ ..++|.++|+|++|+|+++|++++.+++||+|++++..+|+.|++|+.++.+.|...
T Consensus 30 ~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (338)
T cd08254 30 LVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQ 109 (338)
T ss_pred EEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCC
Confidence 478899999999855432222 234578999999999999999999999999999999999999999999999999654
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
... | ....|+|++|++++.+.++++|++++.++++.++.++.|||+++.....+++++
T Consensus 110 ~~~---~-------------------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~ 167 (338)
T cd08254 110 GMP---G-------------------LGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGE 167 (338)
T ss_pred Ccc---c-------------------cccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCC
Confidence 331 0 112379999999999999999999999999999999999999988888899999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
+|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..+.. +.+.+ ..+.+ ++|+++|++|..
T Consensus 168 ~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~D~vid~~g~~ 243 (338)
T cd08254 168 TVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLDDS--PKDKK-AAGLGGGFDVIFDFVGTQ 243 (338)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCCcC--HHHHH-HHhcCCCceEEEECCCCH
Confidence 99999889999999999999999 799999999999999999998888776554 55555 44444 899999999887
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
..++.++++++++ |+++.++.......+.. ...+.++.++.++.... ...++.++++++++.+.+. .+.+++
T Consensus 244 ~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~~---~~~~~~ 315 (338)
T cd08254 244 PTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL-SDLIARELRIIGSFGGT---PEDLPEVLDLIAKGKLDPQ---VETRPL 315 (338)
T ss_pred HHHHHHHHHhhcC-CEEEEECCCCCCCccCH-HHHhhCccEEEEeccCC---HHHHHHHHHHHHcCCCccc---ceeEcH
Confidence 8899999999998 99999986543322222 22245666777654332 2568889999999988754 578999
Q ss_pred CcHHHHHHHHhcCCc-ceEEEec
Q 019414 318 SEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++++++++.+.+++. .|+|+++
T Consensus 316 ~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 316 DEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHcCCccceEEEeC
Confidence 999999999988876 4888764
No 63
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.9e-36 Score=278.44 Aligned_cols=306 Identities=32% Similarity=0.524 Sum_probs=248.1
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||++++++|+.|+....... ...+|.++|+|++|+|+++|++++.+++||+|+..+..+|+.|..|+.+++|+|....
T Consensus 28 ~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (337)
T cd08261 28 LVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQ 107 (337)
T ss_pred EEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence 478999999999966543322 2245789999999999999999999999999999989999999999999999995321
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.. .....|+|++|+.++++ ++++|+++++++++.+ ..+.++++++ ...++.+|++
T Consensus 108 ~~----------------------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~ 162 (337)
T cd08261 108 VL----------------------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDT 162 (337)
T ss_pred ee----------------------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCE
Confidence 10 00113799999999999 9999999999998876 5678888876 7788999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChH
Q 019414 160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID 238 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~ 238 (341)
|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++.+.+ +.+.++..+++ ++|++||++|+..
T Consensus 163 vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~ 239 (337)
T cd08261 163 VLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVIDATGNPA 239 (337)
T ss_pred EEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcccC--HHHHHHHHhCCCCCCEEEECCCCHH
Confidence 9999889999999999999999 788888899999999999999999888765 78888888776 8999999998877
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
.+..++++++++ |+++.++.......++. ..+..+++++.+... ...+.+++++++++++.+.+.+.+...++++
T Consensus 240 ~~~~~~~~l~~~-G~~i~~g~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~ 314 (337)
T cd08261 240 SMEEAVELVAHG-GRVVLVGLSKGPVTFPD-PEFHKKELTILGSRN---ATREDFPDVIDLLESGKVDPEALITHRFPFE 314 (337)
T ss_pred HHHHHHHHHhcC-CEEEEEcCCCCCCccCH-HHHHhCCCEEEEecc---CChhhHHHHHHHHHcCCCChhhheEEEeeHH
Confidence 889999999998 99999986543222221 122335666665431 2225788899999999887643467899999
Q ss_pred cHHHHHHHHhcCC-c-ceEEEec
Q 019414 319 EINKAFEYMVKGE-G-LRCIISM 339 (341)
Q Consensus 319 ~i~ea~~~~~~~~-~-~k~vl~~ 339 (341)
+++++++.+.+++ . .|+|+++
T Consensus 315 ~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 315 DVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHHhcCCCceEEEEEeC
Confidence 9999999998874 4 5998864
No 64
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.3e-36 Score=285.58 Aligned_cols=310 Identities=18% Similarity=0.248 Sum_probs=245.3
Q ss_pred CccccccCCcCcceeeeccCC----------CC-CCC-ccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----------TP-LFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR 68 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----------~~-~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~ 68 (341)
+||+.++++|+.|........ .+ ..| .++|||++|+|+++|++++++++||+|++.+..+|++|++|+
T Consensus 41 lV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~ 120 (398)
T TIGR01751 41 LVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGR 120 (398)
T ss_pred EEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhc
Confidence 578899999987743221110 11 123 389999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhh
Q 019414 69 SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 148 (341)
Q Consensus 69 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l 148 (341)
++++++|.....+.. ....|+|+||++++.+.++++|+++++++++.++.++.|||+++
T Consensus 121 ~~~~~~~~~~~~~g~---------------------~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al 179 (398)
T TIGR01751 121 VGDPMLSSEQRIWGY---------------------ETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQL 179 (398)
T ss_pred cCccccccccccccc---------------------cCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHH
Confidence 999999977543210 01237999999999999999999999999999999999999997
Q ss_pred hh--hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-------------
Q 019414 149 LN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD------------- 212 (341)
Q Consensus 149 ~~--~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~------------- 212 (341)
.. ..++.+|++++|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.++|+++.+
T Consensus 180 ~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~ 258 (398)
T TIGR01751 180 VGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAP 258 (398)
T ss_pred hhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhcccccccccc
Confidence 65 467899999999997 9999999999999999 677777889999999999999999875421
Q ss_pred -------hhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEee
Q 019414 213 -------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTF 283 (341)
Q Consensus 213 -------~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~ 283 (341)
..+.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|..... ..++. ...+.++.++.++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 335 (398)
T TIGR01751 259 KEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG-GMVVICGGTTGYNHDYDN-RYLWMRQKRIQGSH 335 (398)
T ss_pred chhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC-CEEEEEccccCCCCCcCH-HHHhhcccEEEccc
Confidence 1255667777775 89999999986 6789999999998 999999875432 11211 12234566666655
Q ss_pred ecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414 284 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
.... +++++++++++++++.. .+++.+++++++++++.+.+++. .|+|+.+.
T Consensus 336 ~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 336 FANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred cCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 4332 45788999999997764 36789999999999999987775 58888764
No 65
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.6e-36 Score=279.19 Aligned_cols=308 Identities=24% Similarity=0.375 Sum_probs=242.6
Q ss_pred CccccccCCcCcceeeeccCCC----CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT----PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|......+.. ..+|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|++|..|..+.|.
T Consensus 25 ~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~ 104 (339)
T cd08232 25 RVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCL 104 (339)
T ss_pred EEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCc
Confidence 5789999999999654322211 135789999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...+... ... .....|+|++|++++.+.++++|++++.++|+. +.+++++|+++.+.... +
T Consensus 105 ~~~~~~~---~~~--------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~ 165 (339)
T cd08232 105 NMRFLGS---AMR--------------FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-A 165 (339)
T ss_pred cccceee---ccc--------------cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-C
Confidence 8533110 000 001247999999999999999999999998865 57888999987665556 9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh-c-CCccEEEecc
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-N-GGVDRSVECT 234 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~-~-~~~d~vld~~ 234 (341)
+++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++++.+ + .+.. . +++|++||+.
T Consensus 166 ~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~--~----~~~~~~~~~vd~vld~~ 239 (339)
T cd08232 166 GKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP--L----AAYAADKGDFDVVFEAS 239 (339)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh--h----hhhhccCCCccEEEECC
Confidence 99999998899999999999999986788998889999999999998888876533 2 2222 2 3699999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
|+...++.++++++++ |+++.++.......... ...+.+++++.+.... ...++.++++++++.+.+.+.+++.
T Consensus 240 g~~~~~~~~~~~L~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 240 GAPAALASALRVVRPG-GTVVQVGMLGGPVPLPL-NALVAKELDLRGSFRF----DDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred CCHHHHHHHHHHHhcC-CEEEEEecCCCCccCcH-HHHhhcceEEEEEecC----HHHHHHHHHHHHcCCCCchhheeEE
Confidence 8767889999999998 99999986442221111 1124466777665422 2468889999999988776667889
Q ss_pred ecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 315 IPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
|++++++++++.+.+++. +|+|+++
T Consensus 314 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 314 FPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 999999999999987764 5998864
No 66
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.9e-36 Score=276.71 Aligned_cols=309 Identities=28% Similarity=0.402 Sum_probs=248.3
Q ss_pred CccccccCCcCcceeeeccC----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||++++++|+.|+...... ....+|.++|+|++|+|+++|++++++++||+|+..+...|+.|..|..+.+.+|.
T Consensus 27 ~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 106 (340)
T TIGR00692 27 LIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQ 106 (340)
T ss_pred EEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCc
Confidence 57899999999996643221 12235778999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
..+++. ....|++++|++++++.++++|++++.++ ++++.++.+|++++ ....++
T Consensus 107 ~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~--~~~~~~ 161 (340)
T TIGR00692 107 NTKIFG----------------------VDTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV--LAGPIS 161 (340)
T ss_pred CcceEe----------------------ecCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH--HccCCC
Confidence 964321 11237999999999999999999999865 45778889998875 345789
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
|++|+|.|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.++++.+.+ +.+.+.+.+++ ++|++||++|
T Consensus 162 g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 162 GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--HHHHHHHhcCCCCCCEEEECCC
Confidence 99999988899999999999999985588888899999999999998888876655 77888887765 8999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
+...+...+++++++ |+++.+|.......+++....+.+++.+.+.. .....+.+++++++++++++.+.+++++.+
T Consensus 240 ~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 316 (340)
T TIGR00692 240 APKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT--GRHMFETWYTVSRLIQSGKLDLDPIITHKF 316 (340)
T ss_pred CHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEe--cCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence 877889999999998 99999987533222222212234566665543 111224578899999999887655578999
Q ss_pred cCCcHHHHHHHHhcCCcceEEEec
Q 019414 316 PFSEINKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~~~k~vl~~ 339 (341)
++++++++++.+.+++.+|+|+++
T Consensus 317 ~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 317 KFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred eHHHHHHHHHHHhcCCCceEEEeC
Confidence 999999999999877767998875
No 67
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=3.4e-36 Score=274.67 Aligned_cols=292 Identities=24% Similarity=0.351 Sum_probs=235.6
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||++++++|+.|...... ..+ +|.++|||++|+|+++|++ +++||||...+..+|+.|++|..+.+++|.+...
T Consensus 28 lV~v~a~~i~~~d~~~~~g-~~~-~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (319)
T cd08242 28 LVRVLLAGICNTDLEIYKG-YYP-FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV 102 (319)
T ss_pred EEEEEEEEEccccHHHHcC-CCC-CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc
Confidence 5889999999999665422 222 5889999999999999998 6899999999999999999999999999988544
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.. + ....|+|++|++++.+.++++|++++.++++.+ ..+.++|.+ .+..+++++++|
T Consensus 103 ~~------------~---------~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~~~~~g~~v 159 (319)
T cd08242 103 LG------------I---------VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQVPITPGDKV 159 (319)
T ss_pred cC------------c---------cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEE
Confidence 21 0 001379999999999999999999999887754 455566654 577889999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
||+|+|.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++... ..++++|++||++|+...+
T Consensus 160 lV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vid~~g~~~~~ 228 (319)
T cd08242 160 AVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE----------SEGGGFDVVVEATGSPSGL 228 (319)
T ss_pred EEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc----------ccCCCCCEEEECCCChHHH
Confidence 999889999999999999999 68999899999999999999887766431 1223899999999887788
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 320 (341)
+.++++++++ |+++..+.......++. ...+.++.++.++.. ..+++++++++++++++.+.+++.|+++++
T Consensus 229 ~~~~~~l~~~-g~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 300 (319)
T cd08242 229 ELALRLVRPR-GTVVLKSTYAGPASFDL-TKAVVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEA 300 (319)
T ss_pred HHHHHHhhcC-CEEEEEcccCCCCccCH-HHheecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHH
Confidence 9999999997 99998775443322222 123456777776543 238889999999998766668899999999
Q ss_pred HHHHHHHhcCCcceEEEec
Q 019414 321 NKAFEYMVKGEGLRCIISM 339 (341)
Q Consensus 321 ~ea~~~~~~~~~~k~vl~~ 339 (341)
++|++.+.++..+|+|+++
T Consensus 301 ~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 301 LEAFERAAEPGALKVLLRP 319 (319)
T ss_pred HHHHHHHhcCCceEEEeCC
Confidence 9999999877667998864
No 68
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-36 Score=277.37 Aligned_cols=300 Identities=22% Similarity=0.346 Sum_probs=243.5
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+|++.++++|+.|+....... ...+|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|++|..+.+++|....
T Consensus 29 ~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (334)
T PRK13771 29 VIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRL 108 (334)
T ss_pred EEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccc
Confidence 478999999999965432222 2356789999999999999999999999999999988999999999999999998865
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.+. ....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+. .++++++
T Consensus 109 ~~~----------------------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~ 165 (334)
T PRK13771 109 GYG----------------------EELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGET 165 (334)
T ss_pred ccc----------------------cccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCE
Confidence 421 01137999999999999999999999999999999999999997665 8999999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++ ++.+++.+ + +.+.+++. +++|++|||+|+ .
T Consensus 166 vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~--~--~~~~v~~~--~~~d~~ld~~g~-~ 236 (334)
T PRK13771 166 VLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS--K--FSEEVKKI--GGADIVIETVGT-P 236 (334)
T ss_pred EEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--h--HHHHHHhc--CCCcEEEEcCCh-H
Confidence 999987 9999999999999999 788888999999999888 77666654 2 55566554 379999999987 5
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
...+++++++++ |+++.+|....... ...... +.+++++.+.... ..++++.++++++++.+.. .+++.++
T Consensus 237 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~ 309 (334)
T PRK13771 237 TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHISA---TKRDVEEALKLVAEGKIKP--VIGAEVS 309 (334)
T ss_pred HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecCC---CHHHHHHHHHHHHcCCCcc--eEeeeEc
Confidence 788999999998 99999997543322 122122 4567777776422 2256889999999997753 4678999
Q ss_pred CCcHHHHHHHHhcCCc-ceEEEec
Q 019414 317 FSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++++++|++.+.+++. .|+++.+
T Consensus 310 ~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 310 LSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcceEEEec
Confidence 9999999999987665 5888865
No 69
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.1e-35 Score=274.14 Aligned_cols=309 Identities=28% Similarity=0.444 Sum_probs=247.8
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|+...........|.++|+|++|+|+.+|++++.|++||+|++.+...|+.|++|..+.++.|.....
T Consensus 28 ~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (343)
T cd08236 28 LVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY 107 (343)
T ss_pred EEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce
Confidence 57899999999997664333333457899999999999999999999999999999999999999999999999988432
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.. ....|+|++|+.++.+.++++|++++++++|.+ ..+++||+++. ...++++++|
T Consensus 108 ~~----------------------~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~v 163 (343)
T cd08236 108 IG----------------------SRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTV 163 (343)
T ss_pred Ee----------------------cccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEE
Confidence 10 112479999999999999999999999998887 57889999975 7789999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN 239 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~ 239 (341)
+|+|+|.+|++++|+|+.+|+..|+++++++++.+.++++|++.++++++.. .+.++...++ ++|++|||+|+...
T Consensus 164 lI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~d~vld~~g~~~~ 240 (343)
T cd08236 164 VVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIEAAGSPAT 240 (343)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc---HHHHHHHhCCCCCCEEEECCCCHHH
Confidence 9998899999999999999995589998899999999999998888876542 4556666666 79999999988778
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCccccccc--ceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
+..++++++++ |+++.+|.......+.... ..+.++.++.++...... ..+.+++++++++++.+.+.+.+...+
T Consensus 241 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 319 (343)
T cd08236 241 IEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRL 319 (343)
T ss_pred HHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeee
Confidence 89999999998 9999998654332122111 123567777776653221 135688899999999876444467889
Q ss_pred cCCcHHHHHHHHhc-CCc-ceEEE
Q 019414 316 PFSEINKAFEYMVK-GEG-LRCII 337 (341)
Q Consensus 316 ~~~~i~ea~~~~~~-~~~-~k~vl 337 (341)
++++++++++.+.+ +.. .|+|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 320 PLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cHHHHHHHHHHHHcCCCCeeEEeC
Confidence 99999999999988 444 47664
No 70
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.2e-36 Score=277.83 Aligned_cols=282 Identities=18% Similarity=0.215 Sum_probs=216.6
Q ss_pred CccccccCCcCcceeeecc--C--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQ--G--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~--~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
|||++|+|+||.|+..... + ....+|.++|||++|+|+++|+++++|++||||+...
T Consensus 40 lV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------------- 100 (345)
T cd08293 40 LVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN------------------- 100 (345)
T ss_pred EEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC-------------------
Confidence 6899999999998543211 1 1234688999999999999999999999999998641
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchh----hhhccccchhhhhhhhhhc
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VCILSCGVSTGLGATLNVA 152 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~ 152 (341)
++|+||++++++.++++|+++++++ +++++.++.|||+++.+.+
T Consensus 101 --------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~ 148 (345)
T cd08293 101 --------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKG 148 (345)
T ss_pred --------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhc
Confidence 3799999999999999999864432 4567788999999987888
Q ss_pred CCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414 153 KPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 153 ~~~~g--~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
++++| ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++.++++.+.+ +.+.+++.+++++|
T Consensus 149 ~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~~~~gvd 226 (345)
T cd08293 149 HITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDN--VAERLRELCPEGVD 226 (345)
T ss_pred cCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHCCCCce
Confidence 88877 99999987 9999999999999998679999899999998876 9999999887655 88888888767899
Q ss_pred EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC---Ccccc--ccc--ce--eeecceEEEeeecCCCC--CCCHHHHH
Q 019414 229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK---DAVFM--TKP--IN--VLNERTLKGTFFGNYKP--RTDLPSVV 297 (341)
Q Consensus 229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~---~~~~~--~~~--~~--~~~~~~~~g~~~~~~~~--~~~~~~~~ 297 (341)
++||++|+ ..++.++++++++ |+++.+|.... +.... ... .. ..+++............ .+.+++++
T Consensus 227 ~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (345)
T cd08293 227 VYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLS 304 (345)
T ss_pred EEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHH
Confidence 99999998 4679999999998 99999985321 11110 000 01 11233332222111110 12466788
Q ss_pred HHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 298 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 298 ~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+++.++++.+. ....++++++++|++.+.+++. +|+|+++
T Consensus 305 ~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 305 QWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 89999988755 3345699999999999988875 5998864
No 71
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2e-35 Score=272.06 Aligned_cols=305 Identities=27% Similarity=0.448 Sum_probs=248.8
Q ss_pred CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecc-cCCCCCChhhcCCCCCCCcc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF-TGECGDCRHCRSDVSNMCDL 77 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~ 77 (341)
+||++++++|+.|......... .+.|.++|||++|+|+++|++++.+++||+|++.+ ..+|+.|.+|+.+++++|..
T Consensus 30 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (341)
T cd08297 30 LVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN 109 (341)
T ss_pred EEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCC
Confidence 5789999999998654322221 24577899999999999999999999999999876 56899999999999999988
Q ss_pred ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
..+.. ....|++++|+.++.+.++++|+++++++++.++..+.|||+++.. .+++++
T Consensus 110 ~~~~~----------------------~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~ 166 (341)
T cd08297 110 QKNSG----------------------YTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPG 166 (341)
T ss_pred ccccc----------------------cccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCC
Confidence 64421 1123699999999999999999999999999999999999999755 589999
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
++|||+|+ +.+|++++++|+.+|+ +|+++.+++++.+.++++|++.++++.+.+ +.+.+.+.+++ ++|++||+.+
T Consensus 167 ~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vd~vl~~~~ 243 (341)
T cd08297 167 DWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKKSD--DVEAVKELTGGGGAHAVVVTAV 243 (341)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCCcc--HHHHHHHHhcCCCCCEEEEcCC
Confidence 99999987 7799999999999999 899999999999999999999998887654 77788887765 8999999888
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
+...+..++++++++ |+++.+|..... ..+.... ...++..+.+...... +.++.++++++++++.+ . ...
T Consensus 244 ~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~--~-~~~ 315 (341)
T cd08297 244 SAAAYEQALDYLRPG-GTLVCVGLPPGG-FIPLDPFDLVLRGITIVGSLVGTR---QDLQEALEFAARGKVKP--H-IQV 315 (341)
T ss_pred chHHHHHHHHHhhcC-CEEEEecCCCCC-CCCCCHHHHHhcccEEEEeccCCH---HHHHHHHHHHHcCCCcc--e-eEE
Confidence 778899999999998 999999865422 1122111 1256777776543322 57889999999998754 2 367
Q ss_pred ecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 315 IPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
|++++++++++.+..++. .|+++++
T Consensus 316 ~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 316 VPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred EcHHHHHHHHHHHHcCCccceEEEeC
Confidence 999999999999988775 4888865
No 72
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.6e-35 Score=270.51 Aligned_cols=305 Identities=28% Similarity=0.432 Sum_probs=245.5
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||++++++|+.|+..........+|+++|+|++|+|+.+|++++++++||+|++.+...|+.|.+|..+++++|.....
T Consensus 28 ~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (334)
T cd08234 28 LIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA 107 (334)
T ss_pred EEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce
Confidence 57899999999996654443334578899999999999999999999999999999999999999999999999988632
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
. +....|++++|++++.+.++++|+++++.+++.+ ..+.++++++ +.+++++|++|
T Consensus 108 ~----------------------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~v 163 (334)
T cd08234 108 V----------------------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSV 163 (334)
T ss_pred e----------------------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEE
Confidence 1 0112379999999999999999999999988766 7788999987 77899999999
Q ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414 161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM 240 (341)
Q Consensus 161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~ 240 (341)
||+|+|.+|++++++|+..|+..|+++++++++.+.++++|++.+++..+.+ +... +...++++|++||++|....+
T Consensus 164 lI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~vd~v~~~~~~~~~~ 240 (334)
T cd08234 164 LVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRED--PEAQ-KEDNPYGFDVVIEATGVPKTL 240 (334)
T ss_pred EEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCC--HHHH-HHhcCCCCcEEEECCCChHHH
Confidence 9998899999999999999995588888999999999999998888776554 4444 333334899999999877788
Q ss_pred HHHHHHhcCCCcEEEEEccCCCCcccccccce-eeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319 (341)
Q Consensus 241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (341)
..++++++++ |+++.+|.............. +.+++++.+..... ..++++++++.++++.+.+.++..+++++
T Consensus 241 ~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (334)
T cd08234 241 EQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINP----YTFPRAIALLESGKIDVKGLVSHRLPLEE 315 (334)
T ss_pred HHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCH----HHHHHHHHHHHcCCCChhhhEEEEecHHH
Confidence 9999999998 999999865432222222211 22566666654322 46888999999998876665678899999
Q ss_pred HHHHHHHHhcCCcceEEE
Q 019414 320 INKAFEYMVKGEGLRCII 337 (341)
Q Consensus 320 i~ea~~~~~~~~~~k~vl 337 (341)
++++++.+.+....|+|+
T Consensus 316 ~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 316 VPEALEGMRSGGALKVVV 333 (334)
T ss_pred HHHHHHHHhcCCceEEEe
Confidence 999999998833357776
No 73
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.2e-35 Score=271.76 Aligned_cols=279 Identities=17% Similarity=0.230 Sum_probs=223.1
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCC-CCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~ 77 (341)
+||++++++|+.|+....... ...+|.++|||++|+|+++|+++++ |++||+|++.+.
T Consensus 34 lv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~------------------- 94 (324)
T cd08291 34 LIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG------------------- 94 (324)
T ss_pred EEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-------------------
Confidence 578999999999966543222 2357899999999999999999996 999999997621
Q ss_pred ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
.+|+|+||++++++.++++|+++++++++++++.+.|||.+ ...... ++
T Consensus 95 -----------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~ 143 (324)
T cd08291 95 -----------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LETARE-EG 143 (324)
T ss_pred -----------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CC
Confidence 02699999999999999999999999999888889999754 455555 56
Q ss_pred CEEEEE-C-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414 158 SSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT 234 (341)
Q Consensus 158 ~~vlI~-G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~ 234 (341)
++++|+ | +|++|++++|+|+.+|+ +|+++++++++++.++++|++.++++.+.+ +.+.+++.+++ ++|++||++
T Consensus 144 ~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~ 220 (324)
T cd08291 144 AKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSDPD--FLEDLKELIAKLNATIFFDAV 220 (324)
T ss_pred CcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCcc--HHHHHHHHhCCCCCcEEEECC
Confidence 666665 4 59999999999999999 789999999999999999999999887655 88888888876 899999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCC
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEK 309 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~ 309 (341)
|+ ......+++++++ |+++.+|....... ++. ...+.+++++.++....+.. .+.+++++++++ +.+ .+
T Consensus 221 g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~ 294 (324)
T cd08291 221 GG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDP-VDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KT 294 (324)
T ss_pred Cc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCH-HHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--cc
Confidence 88 5667789999997 99999986543221 212 22356788888877654321 135777888887 654 45
Q ss_pred ceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 310 FITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 310 ~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
.++++|+|+|+++|++.+.+++. +|+++.
T Consensus 295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 295 TFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred ceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 68899999999999999988765 688863
No 74
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.4e-35 Score=270.79 Aligned_cols=306 Identities=22% Similarity=0.329 Sum_probs=247.3
Q ss_pred CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|......... ..+|.++|||++|+|+.+|++++++++||+|++.+..+|+.|++|.++.+|+|+..
T Consensus 31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (342)
T cd08266 31 LVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY 110 (342)
T ss_pred EEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccc
Confidence 4788899999988554322211 24588999999999999999999999999999999999999999999999999875
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+.. ....|++++|+.++.+.++++|+++++++++.+++++.+|++++.+...+.+++
T Consensus 111 ~~~g----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~ 168 (342)
T cd08266 111 GILG----------------------EHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGE 168 (342)
T ss_pred cccc----------------------cccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCC
Confidence 3321 112368999999999999999999999999999999999999988888999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++....+ +.+.+...+.+ ++|++++++|.
T Consensus 169 ~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~g~ 245 (342)
T cd08266 169 TVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKED--FVREVRELTGKRGVDVVVEHVGA 245 (342)
T ss_pred EEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCChH--HHHHHHHHhCCCCCcEEEECCcH
Confidence 9999987 7999999999999999 788888999999988888887777665433 66667776665 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
..+..++++++++ |+++.++...... ..... ..+.+++.+.+...... ..++.++++++++.+.+ .+++.|
T Consensus 246 -~~~~~~~~~l~~~-G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~ 317 (342)
T cd08266 246 -ATWEKSLKSLARG-GRLVTCGATTGYE-APIDLRHVFWRQLSILGSTMGTK---AELDEALRLVFRGKLKP--VIDSVF 317 (342)
T ss_pred -HHHHHHHHHhhcC-CEEEEEecCCCCC-CCcCHHHHhhcceEEEEEecCCH---HHHHHHHHHHHcCCccc--ceeeeE
Confidence 6788999999998 9999998654321 11111 22456777776654332 46888899999987654 367899
Q ss_pred cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 316 PFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++++++++++.+.+++. .|+++++
T Consensus 318 ~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 318 PLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999999999987765 4888753
No 75
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.6e-35 Score=272.43 Aligned_cols=279 Identities=20% Similarity=0.247 Sum_probs=223.4
Q ss_pred CccccccCCcCcceeeeccCCC--CCCCccccccc--eEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEA--AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
|||++++++||.|+........ ..+|+++|++. .|++..+|+++++|++||+|+..
T Consensus 41 lv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~-------------------- 100 (338)
T cd08295 41 LVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF-------------------- 100 (338)
T ss_pred EEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec--------------------
Confidence 6899999999999765433221 24578899854 45666688999999999999855
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeec-CceEECC-CCCCch-hhhhccccchhhhhhhhhhcC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKIN-PLAPLD-KVCILSCGVSTGLGATLNVAK 153 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~~l~~~~~ 153 (341)
|+|+||+++++ ..++++| ++++++ +++++++++.|||+++.+..+
T Consensus 101 --------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~ 148 (338)
T cd08295 101 --------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCK 148 (338)
T ss_pred --------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcC
Confidence 58999999999 7999995 678876 789999999999999888889
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCC-ChhHHHHHHHHhcCCccEE
Q 019414 154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~-~~~~~~~i~~~~~~~~d~v 230 (341)
+++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++ +|++.++++.+. + +.+.+++.+++++|++
T Consensus 149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvd~v 225 (338)
T cd08295 149 PKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPD--LDAALKRYFPNGIDIY 225 (338)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCccc--HHHHHHHhCCCCcEEE
Confidence 999999999987 9999999999999999 78888899999999998 999999986543 3 7777777776689999
Q ss_pred EeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc------cccccceeeecceEEEeeecCCCC--CCCHHHHHHHHHC
Q 019414 231 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV------FMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMN 302 (341)
Q Consensus 231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~ 302 (341)
||++|+ ..+..++++++++ |+++.+|....... .++ ...+.+++++.++....... ...++++++++.+
T Consensus 226 ~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~ 302 (338)
T cd08295 226 FDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKE 302 (338)
T ss_pred EECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHC
Confidence 999987 7889999999998 99999986443211 111 12245677777755433211 1246788999999
Q ss_pred CCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 303 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 303 ~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+++.+. +...|+++++++|++.+.+++. +|+|+++
T Consensus 303 g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 303 GKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred CCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 988764 3456999999999999988876 5998864
No 76
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.1e-35 Score=270.15 Aligned_cols=290 Identities=24% Similarity=0.299 Sum_probs=228.8
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|...........+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+.+.+|+|+...+
T Consensus 30 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~ 109 (325)
T cd08264 30 LIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI 109 (325)
T ss_pred EEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce
Confidence 47889999999985543221112357799999999999999999999999999999999999999999999999997543
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.. ....|+|++|++++.+.++++|+++++++++.+++.+.+||+++.. .++++|++|
T Consensus 110 ~~----------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~v 166 (325)
T cd08264 110 IG----------------------VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETV 166 (325)
T ss_pred ee----------------------ccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEE
Confidence 21 1123799999999999999999999999999999999999999754 889999999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
+|+|+ |++|++++++|+..|+ .|+++.+ .+.++++|++.+++..+ ..+.++.++ +++|+++|++|+ ..
T Consensus 167 lI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~----~~~~l~~~~-~~~d~vl~~~g~-~~ 235 (325)
T cd08264 167 VVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE----VEEKVKEIT-KMADVVINSLGS-SF 235 (325)
T ss_pred EEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH----HHHHHHHHh-CCCCEEEECCCH-HH
Confidence 99997 9999999999999999 6777752 36778899988887643 344566666 689999999987 68
Q ss_pred HHHHHHHhcCCCcEEEEEccCCC-CcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 240 MISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
++.++++++++ |+++.+|.... ...++. ...+.++..+.++..+.. +.++++++++...+ ..+++.|+++
T Consensus 236 ~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~----~~~~~~~~~~ 306 (325)
T cd08264 236 WDLSLSVLGRG-GRLVTFGTLTGGEVKLDL-SDLYSKQISIIGSTGGTR---KELLELVKIAKDLK----VKVWKTFKLE 306 (325)
T ss_pred HHHHHHhhccC-CEEEEEecCCCCCCccCH-HHHhhcCcEEEEccCCCH---HHHHHHHHHHHcCC----ceeEEEEcHH
Confidence 99999999998 99999986421 111221 112334556666543322 56888888885432 2356889999
Q ss_pred cHHHHHHHHhcCCcc
Q 019414 319 EINKAFEYMVKGEGL 333 (341)
Q Consensus 319 ~i~ea~~~~~~~~~~ 333 (341)
++++|++.+.+++..
T Consensus 307 ~~~~a~~~~~~~~~~ 321 (325)
T cd08264 307 EAKEALKELFSKERD 321 (325)
T ss_pred HHHHHHHHHHcCCCc
Confidence 999999998876654
No 77
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.6e-35 Score=269.62 Aligned_cols=275 Identities=19% Similarity=0.249 Sum_probs=218.6
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||++++++||.++... . .....|.|+|.|++|+|+++|+ .|++||||+..
T Consensus 35 lv~v~a~~~n~~~~~g~-~-~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------------------------ 85 (325)
T TIGR02825 35 LLEALFLSVDPYMRVAA-K-RLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------------------------ 85 (325)
T ss_pred EEEEEEEecCHHHhccc-C-cCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe------------------------
Confidence 68999999999764322 1 1123478999999999999874 59999999965
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEEC----CCCCCchhh-hhccccchhhhhhhhhhcCCC
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILSCGVSTGLGATLNVAKPE 155 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~ 155 (341)
++|++|+.++.+.+.++ |++++++++ +++++++.|||+++.+..+++
T Consensus 86 ----------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~ 137 (325)
T TIGR02825 86 ----------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVK 137 (325)
T ss_pred ----------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCC
Confidence 36899999999998888 899999987 679999999999988889999
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
+|++|||+|+ |++|++++|+||..|+ +|+++++++++.+.++++|++.++++.+.+ .+.+.++..+++++|++||++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~gvdvv~d~~ 215 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEETLKKASPDGYDCYFDNV 215 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHHHHHHhCCCCeEEEEECC
Confidence 9999999985 9999999999999999 899998999999999999999999887532 266666666655899999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCC---cccc---cccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCC
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKD---AVFM---TKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQL 305 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~~---~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i 305 (341)
|+ ..++.++++++++ |+++.+|..... ...+ .....+.+++++.++....+.. .+.+++++++++++++
T Consensus 216 G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l 293 (325)
T TIGR02825 216 GG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKI 293 (325)
T ss_pred CH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCc
Confidence 87 5779999999998 999999864321 0111 1112234677777765432211 1357889999999988
Q ss_pred CCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 306 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
.+. +...|+++++++|++.+.+++. +|+|++
T Consensus 294 ~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 294 QYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred ccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 765 3466899999999999988876 488763
No 78
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9.4e-35 Score=266.28 Aligned_cols=300 Identities=26% Similarity=0.424 Sum_probs=239.2
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+|+++++++|+.|+....... ..++|.++|||++|+|+++|++++.+++||+|++....+|+.|++|+.+.+++|+...
T Consensus 29 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (332)
T cd08259 29 LIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA 108 (332)
T ss_pred EEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcc
Confidence 578999999999966543222 2346789999999999999999999999999999999999999999999999998742
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
.. | ....|+|++|++++.+.++++|+++++++++.+++++.+||+++.. ..+.++++
T Consensus 109 ~~---~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~ 165 (332)
T cd08259 109 EY---G-------------------EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDT 165 (332)
T ss_pred cc---c-------------------cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCE
Confidence 11 1 1124799999999999999999999999999999999999999766 88999999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+||+|+ |.+|++++++++..|+ .|+++.+++++.+.+++++.+.+++..+ +.+.+.... ++|++++++|. .
T Consensus 166 vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~d~v~~~~g~-~ 237 (332)
T cd08259 166 VLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKLG--GADVVIELVGS-P 237 (332)
T ss_pred EEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhcc--CCCEEEECCCh-H
Confidence 999987 9999999999999999 7888888888888898899877775533 444454443 69999999987 5
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCccc-ccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVF-MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 317 (341)
....+++++.++ |+++.++........ .... ...++..+.++... ...+++++++++.++.+.+ .+++.+++
T Consensus 238 ~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~~ 310 (332)
T cd08259 238 TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSISA---TKADVEEALKLVKEGKIKP--VIDRVVSL 310 (332)
T ss_pred HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHH-HHhCCcEEEEecCC---CHHHHHHHHHHHHcCCCcc--ceeEEEcH
Confidence 678899999997 999999865432211 1111 12356666655321 1246888999999997653 46789999
Q ss_pred CcHHHHHHHHhcCCc-ceEEEe
Q 019414 318 SEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 318 ~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
+++++|++.+.+++. .|+|++
T Consensus 311 ~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 311 EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHcCCcccEEEeC
Confidence 999999999988775 477763
No 79
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-34 Score=265.85 Aligned_cols=294 Identities=23% Similarity=0.329 Sum_probs=236.0
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|........ ...+|+++|||++|+|+++|+++.++++||+|++.+. .+|++|++|+++..|+|...
T Consensus 33 ~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (329)
T cd08298 33 LIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNA 112 (329)
T ss_pred EEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCc
Confidence 478899999999855432221 2356889999999999999999999999999987654 58999999999999999987
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+.. + ...|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ..+++++++
T Consensus 113 ~~~~------------~----------~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~ 169 (329)
T cd08298 113 RFTG------------Y----------TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQ 169 (329)
T ss_pred cccc------------c----------ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCC
Confidence 6531 1 1136999999999999999999999999999999999999997 889999999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+++|+|+|++|++++++++..|+ +|+++.+++++++.++++|++.+++.... .++++|+++++.+...
T Consensus 170 ~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~vD~vi~~~~~~~ 237 (329)
T cd08298 170 RLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-----------PPEPLDAAIIFAPVGA 237 (329)
T ss_pred EEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc-----------CCCcccEEEEcCCcHH
Confidence 99999999999999999999998 88999899999999999999877766432 1237999999877778
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
.++.++++++++ |+++.+|...... .......+.++..+.++..... ..++.++++++++.+.+ .++.|+++
T Consensus 238 ~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~l~~---~~~~~~~~ 309 (329)
T cd08298 238 LVPAALRAVKKG-GRVVLAGIHMSDI-PAFDYELLWGEKTIRSVANLTR---QDGEEFLKLAAEIPIKP---EVETYPLE 309 (329)
T ss_pred HHHHHHHHhhcC-CEEEEEcCCCCCC-CccchhhhhCceEEEEecCCCH---HHHHHHHHHHHcCCCCc---eEEEEeHH
Confidence 899999999998 9999988532211 1111111334555655542221 46788999999997765 25889999
Q ss_pred cHHHHHHHHhcCCcc-eEEE
Q 019414 319 EINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 319 ~i~ea~~~~~~~~~~-k~vl 337 (341)
++++|+..+.+++.. |+|+
T Consensus 310 ~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 310 EANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHHHcCCCcceeeC
Confidence 999999999887764 7653
No 80
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-34 Score=267.20 Aligned_cols=294 Identities=22% Similarity=0.248 Sum_probs=230.0
Q ss_pred CccccccCCcCcceeeeccC---------------------CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC
Q 019414 1 MLSQKHNSFNPRNFVFGFQG---------------------QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 59 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~---------------------~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 59 (341)
+||++++++|+.|....... ...++|.++|||++|+|+++|+++++|++||+|++.+..
T Consensus 32 ~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 111 (350)
T cd08274 32 LIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSI 111 (350)
T ss_pred EEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCc
Confidence 47899999999986543211 123468899999999999999999999999999999888
Q ss_pred CCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccc
Q 019414 60 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 139 (341)
Q Consensus 60 ~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~ 139 (341)
+|+.|+.|.. |.... ....|++++|+.++.+.++++|+++++++++++++
T Consensus 112 ~~~~~~~~~~-----~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~ 161 (350)
T cd08274 112 RDPPEDDPAD-----IDYIG-------------------------SERDGGFAEYTVVPAENAYPVNSPLSDVELATFPC 161 (350)
T ss_pred CCCCcccccc-----ccccC-------------------------CCCCccceEEEEecHHHceeCCCCCCHHHHHhccc
Confidence 8888776532 21100 00136999999999999999999999999999999
Q ss_pred cchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHH
Q 019414 140 GVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 218 (341)
Q Consensus 140 ~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~ 218 (341)
++.|||+++ ...++++|++|||+|+ |++|++++++|+.+|+ +++++.+++ +++.++++|++.+++..... +.+
T Consensus 162 ~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~- 235 (350)
T cd08274 162 SYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDAPL--LAD- 235 (350)
T ss_pred HHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCCcc--HHH-
Confidence 999999986 7788999999999997 9999999999999999 677776665 78888999997665543332 333
Q ss_pred HHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHH
Q 019414 219 IAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 296 (341)
Q Consensus 219 i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 296 (341)
...+.+ ++|++||++|+ ..++.++++++++ |+++.+|..... ..++. ...+.++.++.++..... ..++++
T Consensus 236 -~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~ 308 (350)
T cd08274 236 -AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGPVVELDL-RTLYLKDLTLFGSTLGTR---EVFRRL 308 (350)
T ss_pred -HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCccccCCH-HHhhhcceEEEEeecCCH---HHHHHH
Confidence 344454 89999999987 6889999999998 999999864322 11221 122567888887765432 568899
Q ss_pred HHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 297 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 297 ~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++++.++++.+ ++++.|++++++++++.+.+++. .|+|+.+
T Consensus 309 ~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 309 VRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 99999997753 36788999999999999987765 4888754
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.9e-34 Score=264.41 Aligned_cols=300 Identities=25% Similarity=0.405 Sum_probs=238.7
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|........ ...+|.++|||++|+|+++|++++++++||+|++.+. .+|+.|++|+++++|+|.+.
T Consensus 28 ~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (330)
T cd08245 28 LIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA 107 (330)
T ss_pred EEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCc
Confidence 478899999999865543222 2346889999999999999999999999999988655 57999999999999999996
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.+.. + ...|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.. ..+.+++
T Consensus 108 ~~~~------------~----------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~ 164 (330)
T cd08245 108 VNTG------------Y----------TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGE 164 (330)
T ss_pred cccC------------c----------ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCC
Confidence 5421 0 013699999999999999999999999999999999999998754 7899999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|||+|+|.+|++++++|+.+|. +|+++++++++.+.++++|++.+++....+ .... ..+++|+++|++++..
T Consensus 165 ~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~----~~~~~d~vi~~~~~~~ 237 (330)
T cd08245 165 RVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAEL--DEQA----AAGGADVILVTVVSGA 237 (330)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCcc--hHHh----ccCCCCEEEECCCcHH
Confidence 99999888899999999999999 889998999999999999998887765433 2222 2247999999988778
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 318 (341)
....++++++++ |+++.++..............+.++.++.++..... ..++.+++++.++.+.+ ..+.++++
T Consensus 238 ~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~l~~---~~~~~~~~ 310 (330)
T cd08245 238 AAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR---ADLQEALDFAAEGKVKP---MIETFPLD 310 (330)
T ss_pred HHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH---HHHHHHHHHHHcCCCcc---eEEEEcHH
Confidence 889999999998 999999864322111111122345666666554322 46788899999998764 35789999
Q ss_pred cHHHHHHHHhcCCcc-eEEE
Q 019414 319 EINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 319 ~i~ea~~~~~~~~~~-k~vl 337 (341)
+++++++.+.+++.. |+|+
T Consensus 311 ~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 311 QANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHcCCCCcceeC
Confidence 999999999887764 6653
No 82
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-34 Score=265.59 Aligned_cols=275 Identities=21% Similarity=0.254 Sum_probs=219.6
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
|||++++++||.++.+.. ....+|.++|+|++|+|++ .+++|++||||+..
T Consensus 37 lVkv~a~~in~~~~~~~~--~~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~------------------------ 87 (329)
T cd08294 37 LCEALFLSVDPYMRPYSK--RLNEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS------------------------ 87 (329)
T ss_pred EEEEEEEecCHHHhcccc--cCCCCCcEecceEEEEEec---CCCCCCCCCEEEee------------------------
Confidence 689999999998754321 1224688999999999995 45689999999865
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecC---ceEECCCCCCc-----hhhhhccccchhhhhhhhhhc
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---CVAKINPLAPL-----DKVCILSCGVSTGLGATLNVA 152 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~---~~~~lp~~~~~-----~~aa~l~~~~~ta~~~l~~~~ 152 (341)
+++++|++++.+ .++++|+++++ ..++++++++.|||+++.+..
T Consensus 88 ----------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~ 139 (329)
T cd08294 88 ----------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEIC 139 (329)
T ss_pred ----------------------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhc
Confidence 378999999999 99999999982 233468889999999988889
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++++.+ +.+.+++.+++++|++|
T Consensus 140 ~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vl 216 (329)
T cd08294 140 KPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYF 216 (329)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEE
Confidence 9999999999985 9999999999999999 799998999999999999999999987665 78888887767899999
Q ss_pred eccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc--c---c-cccceeeecceEEEeeecCCC--CCCCHHHHHHHHHCC
Q 019414 232 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---M-TKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNK 303 (341)
Q Consensus 232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~---~-~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~ 303 (341)
|++|+ +.++.++++++++ |+++.+|....... . . .....+.+++++.++....+. ..+.+++++++++++
T Consensus 217 d~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 294 (329)
T cd08294 217 DNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEG 294 (329)
T ss_pred ECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCC
Confidence 99988 7889999999998 99999985322110 0 0 111224567777776543321 112467888999999
Q ss_pred CCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 304 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++.+.+ ...++++++++|++.+.+++. +|+|+++
T Consensus 295 ~i~~~~--~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 295 KLKYRE--HVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CCcCCc--ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 887652 356899999999999988875 5988864
No 83
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.2e-34 Score=242.55 Aligned_cols=284 Identities=21% Similarity=0.341 Sum_probs=221.6
Q ss_pred CccccccCCcCcceeeeccCC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~ 77 (341)
+||.-|+.|||+| .++-++. .|++|.|-|.|++|+|+.+|+++++|++||+|+....
T Consensus 51 ~Vk~LAaPINPsD-IN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a------------------- 110 (354)
T KOG0025|consen 51 LVKMLAAPINPSD-INQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA------------------- 110 (354)
T ss_pred eeeeeecCCChHH-hhhhccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCC-------------------
Confidence 5788899999999 5544444 3578999999999999999999999999999997632
Q ss_pred ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414 78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 157 (341)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 157 (341)
+.|+|++|.+.+++.++++++.++++.||++....+|||++|.+.-++.+|
T Consensus 111 -----------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~G 161 (354)
T KOG0025|consen 111 -----------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKG 161 (354)
T ss_pred -----------------------------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999999999999999999999999999
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH----HHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEE
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF----EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV 231 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~----~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vl 231 (341)
|+|+-.|+ +++|++.+|+||++|++.+-++ |+.... +.++.+||++|+..++-.+ .+..+..... .+.+.|
T Consensus 162 D~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA~~ViTeeel~~--~~~~k~~~~~~~prLal 238 (354)
T KOG0025|consen 162 DSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGATEVITEEELRD--RKMKKFKGDNPRPRLAL 238 (354)
T ss_pred CeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCCceEecHHHhcc--hhhhhhhccCCCceEEE
Confidence 98887787 9999999999999999655555 544333 3466799999985544221 1111111223 789999
Q ss_pred eccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCC--------CCHHHHHHHHHCC
Q 019414 232 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR--------TDLPSVVDMYMNK 303 (341)
Q Consensus 232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~ 303 (341)
||+|+. .-.+..+.|..+ |.++.+|.+......-.+..+++|++.++|+++..+... +.+.++.+++..|
T Consensus 239 NcVGGk-sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G 316 (354)
T KOG0025|consen 239 NCVGGK-SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRG 316 (354)
T ss_pred eccCch-hHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcC
Confidence 999994 445677899997 999999977655433334556789999999998766422 2466788999999
Q ss_pred CCCCCCceeeeecCCcHHHHHHHHhcCC--cceEEEecC
Q 019414 304 QLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISME 340 (341)
Q Consensus 304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~--~~k~vl~~~ 340 (341)
+|..+ ..+..+|++.+.|++...+.. ..|-+|.++
T Consensus 317 ~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 317 KLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred eeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 88655 357889999999998654433 346666553
No 84
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.7e-34 Score=261.63 Aligned_cols=279 Identities=20% Similarity=0.259 Sum_probs=226.5
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||++++++|+.|........ .+.+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus 32 ~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-------------------- 91 (324)
T cd08292 32 LVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV-------------------- 91 (324)
T ss_pred EEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC--------------------
Confidence 578999999999865542222 2346889999999999999999999999999997631
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|+|++|++++...++++|+++++++++.+++.+.++|+++ +..++++|+
T Consensus 92 -----------------------------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~ 141 (324)
T cd08292 92 -----------------------------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQ 141 (324)
T ss_pred -----------------------------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCC
Confidence 26999999999999999999999999999998899999986 558899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|||+|+ |.+|++++|+|+.+|+ .++++.+++++.+.++++|++.++++.+.+ +.+.+...+++ ++|++||++|+
T Consensus 142 ~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~ 218 (324)
T cd08292 142 WLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQPG--WQDKVREAAGGAPISVALDSVGG 218 (324)
T ss_pred EEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCCch--HHHHHHHHhCCCCCcEEEECCCC
Confidence 9999986 9999999999999999 778887888888888889998888876655 78888888887 99999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCC-------CCCCHHHHHHHHHCCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYK-------PRTDLPSVVDMYMNKQLELE 308 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~i~~~ 308 (341)
.....++++++++ |+++.+|..... ..... ...+.+++++.++...... ....++.+++++.++.+.+.
T Consensus 219 -~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~ 295 (324)
T cd08292 219 -KLAGELLSLLGEG-GTLVSFGSMSGE-PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP 295 (324)
T ss_pred -hhHHHHHHhhcCC-cEEEEEecCCCC-CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence 5778999999998 999999865321 11111 1124578888877653211 11357889999999988654
Q ss_pred CceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414 309 KFITHRIPFSEINKAFEYMVKGEG-LRCII 337 (341)
Q Consensus 309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl 337 (341)
+.+.|+++++++|++.+.+++. .|+++
T Consensus 296 --~~~~~~~~~~~~a~~~~~~~~~~~kvvv 323 (324)
T cd08292 296 --VEAVFDLGDAAKAAAASMRPGRAGKVLL 323 (324)
T ss_pred --cccEecHHHHHHHHHHHHcCCCCceEEe
Confidence 4688999999999999987664 47776
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.2e-33 Score=256.26 Aligned_cols=271 Identities=25% Similarity=0.410 Sum_probs=221.1
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|........ ...+|.++|+|++|+|+.+|++++.+++||+|++.+. .+|+.|++|.++.++.|...
T Consensus 30 ~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (306)
T cd08258 30 LIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHR 109 (306)
T ss_pred EEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCC
Confidence 578999999999854432222 2245789999999999999999999999999999875 68999999999999999874
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
+.+. ....|+|++|++++.+.++++|+++++++++ ++..+.++|+++....++++++
T Consensus 110 ~~~~----------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~ 166 (306)
T cd08258 110 KGIG----------------------TQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGD 166 (306)
T ss_pred ceee----------------------ecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCC
Confidence 3210 1123799999999999999999999999876 7778899999988888999999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEE--cCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v--~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
+|||.|+|.+|++++++|+..|+ +|+++ .+++++.+.++++|++.+ ++...+ +.+.++..+++ ++|++||++|
T Consensus 167 ~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~l~~~~~~~~vd~vld~~g 242 (306)
T cd08258 167 TVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGEED--LAELVNEITDGDGADVVIECSG 242 (306)
T ss_pred EEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCcCC--HHHHHHHHcCCCCCCEEEECCC
Confidence 99998889999999999999999 67665 345667888999999877 776655 77788877765 8999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCC
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 303 (341)
+...++..+++++++ |+++.+|..... ..+++ ...+.+++++.|+..+.. ++++++++++++|
T Consensus 243 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~ 306 (306)
T cd08258 243 AVPALEQALELLRKG-GRIVQVGIFGPLAASIDV-ERIIQKELSVIGSRSSTP---ASWETALRLLASG 306 (306)
T ss_pred ChHHHHHHHHHhhcC-CEEEEEcccCCCCcccCH-HHHhhcCcEEEEEecCch---HhHHHHHHHHhcC
Confidence 778899999999998 999999986521 22222 223468999999887654 6799999998765
No 86
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=1.2e-33 Score=251.12 Aligned_cols=265 Identities=30% Similarity=0.463 Sum_probs=216.9
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
||++.++++|+.|........ ...+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|++|+. .|...
T Consensus 3 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~ 78 (271)
T cd05188 3 LVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGG 78 (271)
T ss_pred EEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCC
Confidence 588999999999966543322 245688999999999999999999999999999999999999999997 67665
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.... ....|++++|+.++.+.++++|+++++++++.+++++.+||+++.....+++++
T Consensus 79 ~~~~----------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~ 136 (271)
T cd05188 79 GILG----------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGD 136 (271)
T ss_pred CEec----------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCC
Confidence 4321 112479999999999999999999999999999999999999987777779999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
+|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+.+ +.+.+. ...+ ++|++||+++..
T Consensus 137 ~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~~~ 212 (271)
T cd05188 137 TVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVGGP 212 (271)
T ss_pred EEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCCCH
Confidence 99999986699999999999997 899999999999999999998888776655 555555 4444 899999999886
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHH
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 299 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 299 (341)
..++.++++++++ |+++.++..............+.+++++.++..... .++++++++
T Consensus 213 ~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 213 ETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred HHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 7888999999998 999999876544333222334568888888776543 456666654
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-32 Score=251.49 Aligned_cols=300 Identities=26% Similarity=0.343 Sum_probs=238.3
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|+...... ..+.+|.++|||++|+|+++|++++++++||+|++.....|+.|.+ ++|...
T Consensus 31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~------~~~~~~ 104 (336)
T cd08276 31 LVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPP------TAEDEA 104 (336)
T ss_pred EEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEecccccccccc------cccccc
Confidence 47888999999986654322 2234688999999999999999999999999999987666655444 344221
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.. ++ ....|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.+...+++|+
T Consensus 105 ~~------------~~----------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~ 162 (336)
T cd08276 105 SA------------LG----------GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGD 162 (336)
T ss_pred cc------------cc----------cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCC
Confidence 11 00 112469999999999999999999999999999999999999988888999999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|+|+|+|++|++++++|+..|+ +|++++.++++.+.++++|++.+++... .+ +.+.++..+++ ++|+++|+++.
T Consensus 163 ~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~ 239 (336)
T cd08276 163 TVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVEVGGP 239 (336)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCcccC--HHHHHHHHcCCCCCcEEEECCCh
Confidence 99999889999999999999999 7888989999999999999988887765 44 77778888876 99999999975
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 316 (341)
..+..++++++++ |+++.+|..............+.+++++.+...... ..+++++++++++.+.+. .++.++
T Consensus 240 -~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~~~--~~~~~~ 312 (336)
T cd08276 240 -GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSR---AQFEAMNRAIEAHRIRPV--IDRVFP 312 (336)
T ss_pred -HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcH---HHHHHHHHHHHcCCcccc--cCcEEe
Confidence 6788999999998 999999865433211111223567888888765432 568889999988866543 568899
Q ss_pred CCcHHHHHHHHhcCCc-ceEEEe
Q 019414 317 FSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 317 ~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
+++++++++.+.+++. .|++++
T Consensus 313 ~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 313 FEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHHHHHHHHHHHhCCCCceEEEe
Confidence 9999999999987775 488875
No 88
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.5e-32 Score=252.91 Aligned_cols=283 Identities=23% Similarity=0.330 Sum_probs=224.1
Q ss_pred CccccccCCcCcceeeeccCCC--CC----CCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT--PL----FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 74 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~--~~----~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~ 74 (341)
+||++++++|+.|......... +. +|.++|||++|+|+++|+++..+++||+|+++..
T Consensus 33 ~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------- 96 (341)
T cd08290 33 LVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP---------------- 96 (341)
T ss_pred EEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC----------------
Confidence 5789999999998665433222 12 5779999999999999999999999999997631
Q ss_pred CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCC
Q 019414 75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 154 (341)
Q Consensus 75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 154 (341)
..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.....+
T Consensus 97 --------------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 144 (341)
T cd08290 97 --------------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL 144 (341)
T ss_pred --------------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc
Confidence 126999999999999999999999999999999999999998777889
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHHHHcCCceecCCCCC---ChhHHHHHHHHhcCC
Q 019414 155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGVTDFVNTSEH---DRPIQEVIAEMTNGG 226 (341)
Q Consensus 155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~----~~~~~~~~~g~~~vv~~~~~---~~~~~~~i~~~~~~~ 226 (341)
++|++|||+|+ |++|++++|+|+..|+ +++++.+++ ++.+.++++|++.++++++. + +.+.++...+++
T Consensus 145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~i~~~~~~~ 221 (341)
T cd08290 145 QPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLL--ATELLKSAPGGR 221 (341)
T ss_pred CCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc--HHHHHHHHcCCC
Confidence 99999999986 9999999999999999 666665655 67888899999999887654 3 666777666558
Q ss_pred ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCC----CC---CCHHHHHH
Q 019414 227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYK----PR---TDLPSVVD 298 (341)
Q Consensus 227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~----~~---~~~~~~~~ 298 (341)
+|++|||+|+ ......+++++++ |+++.++...... .++. ...+.+++++.+....... +. ..++.+++
T Consensus 222 ~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08290 222 PKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQPVTVPT-SLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE 298 (341)
T ss_pred ceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCCCcccCH-HHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence 9999999998 5677889999998 9999998543321 1221 1225678888877643321 10 14778889
Q ss_pred HHHCCCCCCCCceeeee---cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 299 MYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 299 ~~~~~~i~~~~~~~~~~---~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++.++.+.+. ....+ ++++++++++.+.+++. .|+|+++
T Consensus 299 ~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 299 LIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 9999987654 34556 99999999999987775 4988864
No 89
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.7e-32 Score=250.61 Aligned_cols=281 Identities=17% Similarity=0.197 Sum_probs=218.0
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||++++++|+.|........ ...+|.++|+|++|+|+++|+++++|++||+|+....
T Consensus 33 ~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--------------------- 91 (336)
T TIGR02817 33 LVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD--------------------- 91 (336)
T ss_pred EEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC---------------------
Confidence 478999999999965442222 2356889999999999999999999999999986510
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC---
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER--- 156 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~--- 156 (341)
....|+|++|++++.+.++++|+++++++++.+++++.|||+++....++++
T Consensus 92 -------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 146 (336)
T TIGR02817 92 -------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVA 146 (336)
T ss_pred -------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 0013799999999999999999999999999999999999999878888877
Q ss_pred --CCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 157 --GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 157 --g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
|++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.+.++++|++.++++.. + +.+.+++..++++|+++|
T Consensus 147 ~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~ 222 (336)
T TIGR02817 147 GDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-P--LKAQLEKLGLEAVSYVFS 222 (336)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-C--HHHHHHHhcCCCCCEEEE
Confidence 999999986 99999999999998 98 8999989999999999999999887654 3 777777754458999999
Q ss_pred ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC--C--CC-----CCCHHHHHHHHHCC
Q 019414 233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN--Y--KP-----RTDLPSVVDMYMNK 303 (341)
Q Consensus 233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~--~~-----~~~~~~~~~~~~~~ 303 (341)
++++......++++++++ |+++.++... .++..+ ...+++.+.+..... . .+ ...++++++++.++
T Consensus 223 ~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 297 (336)
T TIGR02817 223 LTHTDQHFKEIVELLAPQ-GRFALIDDPA---ELDISP-FKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAG 297 (336)
T ss_pred cCCcHHHHHHHHHHhccC-CEEEEEcccc---cccchh-hhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCC
Confidence 987768899999999998 9999885321 122111 122335444432220 0 00 02467889999999
Q ss_pred CCCCCCceeeee---cCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 304 QLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 304 ~i~~~~~~~~~~---~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
.+.+. +++.+ +++++++|++.+.+++. .|+++.
T Consensus 298 ~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 298 KIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred Ceecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 77543 33444 46899999999988876 477764
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=3.3e-32 Score=248.63 Aligned_cols=283 Identities=18% Similarity=0.194 Sum_probs=227.4
Q ss_pred CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+|+++++++|+.|+....... ...+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------ 92 (324)
T cd08244 31 RIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG------------------ 92 (324)
T ss_pred EEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC------------------
Confidence 478899999999865432221 2345789999999999999999999999999997631
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...|+|++|+.++.+.++++|+++++++++++++.+.||| ++....++++
T Consensus 93 -----------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~ 142 (324)
T cd08244 93 -----------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTP 142 (324)
T ss_pred -----------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCC
Confidence 0137999999999999999999999999999999999995 5577789999
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT 234 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~ 234 (341)
+++|+|+|+ |.+|++++++|+.+|+ .|+++++++++.+.++++|++.+++..+.+ +.+.+...+++ ++|+++|++
T Consensus 143 ~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~ 219 (324)
T cd08244 143 GDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTRPD--WPDQVREALGGGGVTVVLDGV 219 (324)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHcCCCCceEEEECC
Confidence 999999985 9999999999999999 789998999999999999998888776655 77777777776 899999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~ 310 (341)
|+. ..+.++++++++ |+++.+|....... ... ...+.+++.+.+.......+ .+.++++++++.++++.. +
T Consensus 220 g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~ 294 (324)
T cd08244 220 GGA-IGRAALALLAPG-GRFLTYGWASGEWT-ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--V 294 (324)
T ss_pred ChH-hHHHHHHHhccC-cEEEEEecCCCCCC-ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--c
Confidence 884 668999999997 99999987543321 221 12246777777766543211 135677888999987753 3
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCIISM 339 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~ 339 (341)
++..|+++++++|++.+.+++.. |+++++
T Consensus 295 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 295 VGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 67889999999999999887754 888764
No 91
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.6e-32 Score=245.34 Aligned_cols=280 Identities=25% Similarity=0.313 Sum_probs=221.0
Q ss_pred CccccccCCcCcceeee-ccCC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFG-FQGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~-~~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|.... .... .+.+|.++|+|++|+|+++|++++++++||+|++..
T Consensus 23 ~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------------- 83 (312)
T cd08269 23 LVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS------------------- 83 (312)
T ss_pred EEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-------------------
Confidence 47889999999986543 2221 123478999999999999999999999999999762
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
.|+|++|++++.+.++++|+++ ..++.+..+++++++++. ..++++
T Consensus 84 -------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~ 129 (312)
T cd08269 84 -------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRA 129 (312)
T ss_pred -------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCC
Confidence 2689999999999999999998 232322377889998865 788999
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
+++|+|+|+|.+|++++++|+..|++.|+++.+++++.++++++|++.+++.+..+ +.+.+.+.+.+ ++|+++||+|
T Consensus 130 ~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~~vd~vld~~g 207 (312)
T cd08269 130 GKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVG 207 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHHHHcCCCCCCEEEECCC
Confidence 99999998899999999999999994488898999999999999998888766554 88888888776 9999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCC-CCCCHHHHHHHHHCCCCCCCCceee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYK-PRTDLPSVVDMYMNKQLELEKFITH 313 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~ 313 (341)
....+..++++++++ |+++.+|..... ...+.. ....+++.+.+....... ..+.+++++++++++.+.+..++++
T Consensus 208 ~~~~~~~~~~~l~~~-g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (312)
T cd08269 208 HQWPLDLAGELVAER-GRLVIFGYHQDG-PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTH 285 (312)
T ss_pred CHHHHHHHHHHhccC-CEEEEEccCCCC-CcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheee
Confidence 877889999999998 999999865421 111111 123456666554322221 1247889999999998876545678
Q ss_pred eecCCcHHHHHHHHhcCCc--ceEEE
Q 019414 314 RIPFSEINKAFEYMVKGEG--LRCII 337 (341)
Q Consensus 314 ~~~~~~i~ea~~~~~~~~~--~k~vl 337 (341)
.|++++++++++.+.+++. +|+++
T Consensus 286 ~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 286 EFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eecHHHHHHHHHHHHhCCCCceEEEe
Confidence 8999999999999988864 68887
No 92
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.7e-33 Score=251.34 Aligned_cols=285 Identities=27% Similarity=0.424 Sum_probs=204.9
Q ss_pred CccccccCCcCcceeeeccCCC--C---CCCccccccceEE---EEEec-CCCCCCCCCCEEEecccCCCCCChhhcCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT--P---LFPRIFGHEAAGV---VESVG-EGVSDLEVGDHVLPVFTGECGDCRHCRSDV 71 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~--~---~~p~i~G~e~~G~---V~~vG-~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~ 71 (341)
+|++.++++||.|+..+..... + .+|.+++.++.|+ +...| ..+..+..||++....
T Consensus 36 ~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~-------------- 101 (347)
T KOG1198|consen 36 LIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAFL-------------- 101 (347)
T ss_pred EEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeecc--------------
Confidence 5788999999999776544332 2 3554444444443 33333 2233344455444331
Q ss_pred CCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh
Q 019414 72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 151 (341)
Q Consensus 72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~ 151 (341)
..|+|+||+++|+..++++|+++++++||++|.++.|||.++++.
T Consensus 102 -----------------------------------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~ 146 (347)
T KOG1198|consen 102 -----------------------------------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQL 146 (347)
T ss_pred -----------------------------------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhc
Confidence 237999999999999999999999999999999999999999999
Q ss_pred c------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414 152 A------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 152 ~------~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
. +.++|++|||+|+ |++|++++|+|+..++ ..+++.+++++.++++++|++.++|+++.+ +.+.+++.++
T Consensus 147 ~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~--~~e~~kk~~~ 223 (347)
T KOG1198|consen 147 APGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKDEN--VVELIKKYTG 223 (347)
T ss_pred cccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCCHH--HHHHHHhhcC
Confidence 9 8999999999976 9999999999999996 555555899999999999999999999866 9999999885
Q ss_pred CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccc-cceeeecce-----EEEeee---cCCCCCCCHH
Q 019414 225 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK-PINVLNERT-----LKGTFF---GNYKPRTDLP 294 (341)
Q Consensus 225 ~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~-~~~~~~~~~-----~~g~~~---~~~~~~~~~~ 294 (341)
++||+||||+|+. .......++... |+...++..... ...... .....+.+. +.+... ......+.++
T Consensus 224 ~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLK 301 (347)
T ss_pred CCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHH
Confidence 5999999999984 666777777776 654444432211 111111 000001111 111000 0111224688
Q ss_pred HHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCC-cceEEEecCC
Q 019414 295 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISMED 341 (341)
Q Consensus 295 ~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~-~~k~vl~~~~ 341 (341)
.+.++++++++ .+.+.+.||++++++|+..+.++. .+|+++.+.+
T Consensus 302 ~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 302 ALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred HHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 89999999955 555889999999999999998755 4699998753
No 93
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.3e-32 Score=248.56 Aligned_cols=281 Identities=21% Similarity=0.320 Sum_probs=228.4
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||++++++|+.|....... ..+.+|.++|||++|+|+.+|++++.+++||+|++.+.
T Consensus 30 ~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------------------- 89 (323)
T cd05282 30 LVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-------------------- 89 (323)
T ss_pred EEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC--------------------
Confidence 47899999999986543222 22356789999999999999999999999999998731
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|+|++|+.++...++++|+++++.+++.+++.+.+||+++.....+.+|+
T Consensus 90 -----------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~ 140 (323)
T cd05282 90 -----------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGD 140 (323)
T ss_pred -----------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCC
Confidence 268999999999999999999999999999999999999988878889999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|||+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|++.++++.+.+ +.+.+...+.+ ++|++||++|+
T Consensus 141 ~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~ 217 (323)
T cd05282 141 WVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGAGARLALDAVGG 217 (323)
T ss_pred EEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHHHhcCCCceEEEECCCC
Confidence 9999987 8999999999999999 788888889999999999999998876544 77778888776 99999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceee-ecceEEEeeecCCCC-------CCCHHHHHHHHHCCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELE 308 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~i~~~ 308 (341)
......+++++++ |+++.+|..... ........+. +++++.+.....+.. ...++++++++.++++.+.
T Consensus 218 -~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 294 (323)
T cd05282 218 -ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP 294 (323)
T ss_pred -HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC
Confidence 5567889999997 999999875543 2222222233 788888776543311 1247778899999977643
Q ss_pred CceeeeecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414 309 KFITHRIPFSEINKAFEYMVKGEGL-RCIIS 338 (341)
Q Consensus 309 ~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl~ 338 (341)
+++.|++++++++++.+.+++.. |+|++
T Consensus 295 --~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 295 --VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred --ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 57889999999999999877654 77763
No 94
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=4.2e-32 Score=248.49 Aligned_cols=285 Identities=20% Similarity=0.251 Sum_probs=222.5
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||+.++|+|+.|........ .+.+|.++|||++|+|+.+|++++.+++||+|+....
T Consensus 32 ~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------- 90 (327)
T PRK10754 32 QVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS--------------------- 90 (327)
T ss_pred EEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC---------------------
Confidence 478899999999865543322 2346889999999999999999999999999985410
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
+.|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....+++|++
T Consensus 91 ---------------------------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~ 143 (327)
T PRK10754 91 ---------------------------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQ 143 (327)
T ss_pred ---------------------------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCE
Confidence 12689999999999999999999999999999999999999877788999999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
++|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++....+ +.+.++..+++ ++|++|||+|+
T Consensus 144 vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~- 219 (327)
T PRK10754 144 FLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGGKKVRVVYDSVGK- 219 (327)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCCCc--HHHHHHHHcCCCCeEEEEECCcH-
Confidence 999975 9999999999999999 788888999999999999998888776655 77888888886 89999999987
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecc------eEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCc
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNER------TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 310 (341)
..+...+++++++ |+++.+|...... .+..... ..++. .+.+...........++++++++.++++.+...
T Consensus 220 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~ 297 (327)
T PRK10754 220 DTWEASLDCLQRR-GLMVSFGNASGPVTGVNLGIL-NQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVA 297 (327)
T ss_pred HHHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHH-hccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecc
Confidence 6788899999997 9999998654221 1111110 11111 111111000000013456889999998876555
Q ss_pred eeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 311 ITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+.+.|++++++++++.+.+++. .|+|+.+
T Consensus 298 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 298 EQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred cCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 5789999999999999988775 5998853
No 95
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=4.6e-31 Score=242.87 Aligned_cols=287 Identities=21% Similarity=0.322 Sum_probs=220.8
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||++++++|+.|+..........+|.++|||++|+|+.+|++++.+++||+|++.....|+
T Consensus 30 ~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~------------------ 91 (339)
T cd08249 30 LVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP------------------ 91 (339)
T ss_pred EEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC------------------
Confidence 47899999999996654333223357899999999999999999999999999987533221
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCC------
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP------ 154 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~------ 154 (341)
+....|++++|++++.+.++++|+++++++++.+++.+.|||+++.+..++
T Consensus 92 -----------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~ 148 (339)
T cd08249 92 -----------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPK 148 (339)
T ss_pred -----------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCC
Confidence 011247999999999999999999999999999999999999997766544
Q ss_pred ----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414 155 ----ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 155 ----~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~ 229 (341)
.++++++|+|+ |.+|++++++|+.+|+ .|+++. ++++.+.++++|++.+++..+.+ +.+.+++.+++++|+
T Consensus 149 ~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~d~ 224 (339)
T cd08249 149 PSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHDPD--VVEDIRAATGGKLRY 224 (339)
T ss_pred CCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCCch--HHHHHHHhcCCCeeE
Confidence 78999999997 9999999999999999 677776 56888889999998888876655 777888777778999
Q ss_pred EEeccCChHHHHHHHHHhcC--CCcEEEEEccCCCCcccccccceeeecceEEEeeecC---CC---CCCCHHHHHHHHH
Q 019414 230 SVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN---YK---PRTDLPSVVDMYM 301 (341)
Q Consensus 230 vld~~g~~~~~~~~~~~l~~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~---~~~~~~~~~~~~~ 301 (341)
+||++|++..+..+++++++ + |+++.++......... ... +...+....... .. ....++.++++++
T Consensus 225 vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (339)
T cd08249 225 ALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEETEPR---KGV-KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLE 299 (339)
T ss_pred EEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccccCC---CCc-eEEEEEeeeecccccccccchHHHHHHHHHHHH
Confidence 99999876789999999999 8 9999998654322111 001 111111111110 11 1134677889999
Q ss_pred CCCCCCCCceeeeec--CCcHHHHHHHHhcCC-c-ceEEEec
Q 019414 302 NKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM 339 (341)
Q Consensus 302 ~~~i~~~~~~~~~~~--~~~i~ea~~~~~~~~-~-~k~vl~~ 339 (341)
++++.+.+ ...++ ++++++|++.+.+++ . .|+|+++
T Consensus 300 ~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 300 EGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred cCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 99887653 34566 999999999998887 5 4988864
No 96
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.6e-31 Score=244.85 Aligned_cols=281 Identities=24% Similarity=0.322 Sum_probs=222.5
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|+....... ...+|.++|||++|+|+.+|++++++++||+|++..
T Consensus 34 ~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~--------------------- 92 (329)
T cd08250 34 LVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS--------------------- 92 (329)
T ss_pred EEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec---------------------
Confidence 478999999999865432222 245788999999999999999999999999999762
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|+|++|+.++.+.++++|++ ..+++.+++++.|||+++.+..++++|+
T Consensus 93 -----------------------------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~ 141 (329)
T cd08250 93 -----------------------------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGE 141 (329)
T ss_pred -----------------------------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCC
Confidence 269999999999999999997 3567889999999999988878899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
+|+|+|+ |.+|++++++|+..|+ .|+++.+++++.+.++++|++.+++..+.+ +.+.+....++++|++||++|+
T Consensus 142 ~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~- 217 (329)
T cd08250 142 TVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKEYPKGVDVVYESVGG- 217 (329)
T ss_pred EEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-
Confidence 9999985 9999999999999999 788888899999999999998888766544 6666666655589999999986
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcc---------cccccceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCCC
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAV---------FMTKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLE 306 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i~ 306 (341)
..+..++++++++ |+++.+|....... ..+....+.+++++.+....... ..+.++++++++.++.+.
T Consensus 218 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (329)
T cd08250 218 EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLV 296 (329)
T ss_pred HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCee
Confidence 7889999999997 99999986543210 11112234567777776543211 113467788999999877
Q ss_pred CCCceeeeecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414 307 LEKFITHRIPFSEINKAFEYMVKGEGL-RCIIS 338 (341)
Q Consensus 307 ~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl~ 338 (341)
+.....+.++++++++|++.+.+++.. |+|++
T Consensus 297 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 297 CEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred eeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 643345679999999999999887654 87764
No 97
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.98 E-value=6e-31 Score=224.93 Aligned_cols=282 Identities=17% Similarity=0.220 Sum_probs=227.7
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEec--CCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVG--EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||+.+.+++|.++.++.-...--.|.-+|...+|-++... ++...|++||.|+..
T Consensus 43 Ll~~~ylS~DPymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---------------------- 100 (340)
T COG2130 43 LLRTLYLSLDPYMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---------------------- 100 (340)
T ss_pred EEEEEEeccCHHHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----------------------
Confidence 68999999999887765332221236667776666444433 457789999999977
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchh--hhhccccchhhhhhhhhhcCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
.+|+||..++.+.+.++.++.-... ...|..+..|||.+|.+.+++++
T Consensus 101 ------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~ 150 (340)
T COG2130 101 ------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKA 150 (340)
T ss_pred ------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCC
Confidence 3899999999999999986543222 24577789999999999999999
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
|++|+|-++ |++|..+.||||..|+ +||.+..++||.+++++ +|.+.++||...+ +.+.+.+.+++|+|+.||++
T Consensus 151 GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~~L~~a~P~GIDvyfeNV 227 (340)
T COG2130 151 GETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALKEACPKGIDVYFENV 227 (340)
T ss_pred CCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHHHHHHHCCCCeEEEEEcC
Confidence 999999986 9999999999999999 99999999999999988 9999999999887 99999999999999999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcc--cc----cccceeeecceEEEeeecCC-C--CCCCHHHHHHHHHCCCC
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FM----TKPINVLNERTLKGTFFGNY-K--PRTDLPSVVDMYMNKQL 305 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~----~~~~~~~~~~~~~g~~~~~~-~--~~~~~~~~~~~~~~~~i 305 (341)
|+ +.++..+..|+.. +|+..||..+.-.. .+ ..+..+.+.+++.|+...+. . +.+..+++.+|+++|+|
T Consensus 228 Gg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi 305 (340)
T COG2130 228 GG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKI 305 (340)
T ss_pred Cc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCce
Confidence 98 8999999999998 99999996533111 11 11233557889999887332 1 12467889999999999
Q ss_pred CCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414 306 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 341 (341)
Q Consensus 306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~ 341 (341)
+... +-.-.|+.+|+||.-|.+++. +|.|+++.+
T Consensus 306 ~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 306 QYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred eeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 8874 344569999999999999997 499998764
No 98
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.98 E-value=8.3e-31 Score=240.33 Aligned_cols=284 Identities=18% Similarity=0.273 Sum_probs=223.6
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|........ ...+|.++|||++|+|+++|++++++++||+|+....
T Consensus 32 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~-------------------- 91 (334)
T PTZ00354 32 LIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLP-------------------- 91 (334)
T ss_pred EEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEecC--------------------
Confidence 478899999998855532211 2345679999999999999999999999999986521
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
+|++++|++++.+.++++|++++..+++.+++++.+||+++.+...+++|+
T Consensus 92 -----------------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~ 142 (334)
T PTZ00354 92 -----------------------------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQ 142 (334)
T ss_pred -----------------------------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 268999999999999999999999999999999999999988878899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|+|+|+ |++|++++++|+..|+ .++.+.+++++.+.++++|++.++++...+ .+.+.++..+++ ++|++||++++
T Consensus 143 ~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~ 220 (334)
T PTZ00354 143 SVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG 220 (334)
T ss_pred EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChh-HHHHHHHHHhCCCCceEEEECCch
Confidence 9999986 9999999999999999 666677899999999999998888775432 266677777765 89999999976
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCCC-------CCHHHHHHHHHCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQLEL 307 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~i~~ 307 (341)
..+..++++++++ |+++.++....... +.. ...+.++.++.++........ ..+++++++++++.+.+
T Consensus 221 -~~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 297 (334)
T PTZ00354 221 -SYLSETAEVLAVD-GKWIVYGFMGGAKVEKFNL-LPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP 297 (334)
T ss_pred -HHHHHHHHHhccC-CeEEEEecCCCCcccccCH-HHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence 7889999999998 99999985432211 221 112335556666554331110 12467788888887654
Q ss_pred CCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414 308 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 308 ~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
++++.+++++++++++.+.+++. .|+|+++.
T Consensus 298 --~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 298 --IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred --ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 35788999999999999987765 59998775
No 99
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=6.4e-31 Score=238.20 Aligned_cols=270 Identities=24% Similarity=0.305 Sum_probs=215.0
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|..... ....|.++|||++|+|+++|++++.|++||+|+...
T Consensus 30 ~v~v~~~~i~~~d~~~~~---~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----------------------- 83 (305)
T cd08270 30 LVRVAAISLNRGELKFAA---ERPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG----------------------- 83 (305)
T ss_pred EEEEEEEecCHHHHHhhc---cCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec-----------------------
Confidence 478999999999865432 222367899999999999999999999999998752
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
..|+|++|+.++.+.++++|+++++++++++++.+.|||+++...... +|+++
T Consensus 84 --------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~v 136 (305)
T cd08270 84 --------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRV 136 (305)
T ss_pred --------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEE
Confidence 126999999999999999999999999999999999999997665545 59999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
+|+|+ |++|++++++|+..|+ +|+.+.+++++.+.++++|++.+++..+ +..++++|+++|++|+ ..
T Consensus 137 li~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~d~vl~~~g~-~~ 204 (305)
T cd08270 137 LVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELSGAPVDLVVDSVGG-PQ 204 (305)
T ss_pred EEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------cccCCCceEEEECCCc-HH
Confidence 99987 9999999999999999 8899889999999999999876553322 1122479999999987 57
Q ss_pred HHHHHHHhcCCCcEEEEEccCCCCcccccccceee---ecceEEEeeecC-CCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFGN-YKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~---~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
+..++++++++ |+++.+|..... ........+. ++.++.++.... ......++.++++++++++.+. +.+.+
T Consensus 205 ~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~ 280 (305)
T cd08270 205 LARALELLAPG-GTVVSVGSSSGE-PAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRG 280 (305)
T ss_pred HHHHHHHhcCC-CEEEEEeccCCC-cccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEE
Confidence 89999999998 999999865422 1111121222 477777776543 1112457888999999988753 66899
Q ss_pred cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 316 PFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++++++++++.+.+++. .|+|+++
T Consensus 281 ~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 281 SWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999999987775 4888764
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=8.7e-31 Score=238.57 Aligned_cols=282 Identities=23% Similarity=0.343 Sum_probs=219.8
Q ss_pred CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||++++++|+.|+....... ....|.++|||++|+|+++|. ..+++||+|++....- +
T Consensus 31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~--------------~---- 90 (320)
T cd08243 31 LIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM--------------G---- 90 (320)
T ss_pred EEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC--------------C----
Confidence 478899999999865443322 234578999999999999995 5799999999773100 0
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
....|+|++|+.++...++++|+++++++++.+++++.+||+++.+...+++|++
T Consensus 91 -------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~ 145 (320)
T cd08243 91 -------------------------RTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDT 145 (320)
T ss_pred -------------------------CCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCE
Confidence 0013699999999999999999999999999999999999999888888999999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
|||+|+ |++|++++++|+..|+ +|+++.+++++.+.++++|++.+++. ..+ +.+.++.. ++++|+++|++|+ .
T Consensus 146 vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~--~~~~i~~~-~~~~d~vl~~~~~-~ 219 (320)
T cd08243 146 LLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-DGA--IAEQLRAA-PGGFDKVLELVGT-A 219 (320)
T ss_pred EEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-Ccc--HHHHHHHh-CCCceEEEECCCh-H
Confidence 999987 9999999999999999 78988899999999999999887754 333 67777777 5589999999987 6
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCccc----ccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVF----MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (341)
.++.++++++++ |+++.+|........ ......+.+++++.+...... ....++.++++++++.+.+. +++.
T Consensus 220 ~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 295 (320)
T cd08243 220 TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV-PQTPLQELFDFVAAGHLDIP--PSKV 295 (320)
T ss_pred HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh-hHHHHHHHHHHHHCCceecc--cccE
Confidence 889999999998 999999864322111 111111245666665543221 11357788899999977643 5688
Q ss_pred ecCCcHHHHHHHHhcCCcc-eEEE
Q 019414 315 IPFSEINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 315 ~~~~~i~ea~~~~~~~~~~-k~vl 337 (341)
++++++++|++.+.+++.. |+|+
T Consensus 296 ~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 296 FTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred EcHHHHHHHHHHHHhCCCCCcEEe
Confidence 9999999999999877754 7665
No 101
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=3.3e-30 Score=235.57 Aligned_cols=284 Identities=18% Similarity=0.226 Sum_probs=212.8
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|........ ...+|.++|||++|+|+++ +++.+++||+|++....
T Consensus 31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~------------------- 89 (325)
T cd05280 31 LIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYD------------------- 89 (325)
T ss_pred EEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccc-------------------
Confidence 478999999999966543322 2345789999999999998 56789999999976310
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcC--CC-
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK--PE- 155 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~--~~- 155 (341)
+ +....|+|++|+.++++.++++|+++++++++.+++.+.+||+++....+ +.
T Consensus 90 --------------~----------g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 145 (325)
T cd05280 90 --------------L----------GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTP 145 (325)
T ss_pred --------------c----------CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCC
Confidence 0 01123699999999999999999999999999999999999998765443 35
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.+++|+|+|+ |.+|++++++|+.+|+ .|+++++++++++.++++|++.+++..+. .....+....+++|++||++
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDREDL---LDESKKPLLKARWAGAIDTV 221 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchhH---HHHHHHHhcCCCccEEEECC
Confidence 3579999997 9999999999999999 78989899999999999999988876542 11222333334899999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCC---CCHHHHHHHHHCCCCCCCCc
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPR---TDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~ 310 (341)
|+ ..+..++++++++ |+++.+|....... .... ..+.+++++.+.......+. ..++.+.+++..+.. +.
T Consensus 222 ~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 295 (325)
T cd05280 222 GG-DVLANLLKQTKYG-GVVASCGNAAGPEL-TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EI 295 (325)
T ss_pred ch-HHHHHHHHhhcCC-CEEEEEecCCCCcc-ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cc
Confidence 87 6889999999998 99999987543221 2222 22368888887765432210 123334444455522 23
Q ss_pred eeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 311 ITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++..|++++++++++.+.+++. +|+|+++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 296 VVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 6789999999999999988876 4888764
No 102
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=4.9e-30 Score=233.01 Aligned_cols=282 Identities=23% Similarity=0.287 Sum_probs=224.6
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+|++.++++|+.|...........+|.++|||++|+|+.+|++++++++||+|++..
T Consensus 30 ~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~----------------------- 86 (320)
T cd05286 30 LVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG----------------------- 86 (320)
T ss_pred EEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-----------------------
Confidence 367888999998865543322334678999999999999999999999999999762
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
..|++++|+.++.+.++++|++++..+++.++..+.++++++.+..++.+|++|
T Consensus 87 --------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~v 140 (320)
T cd05286 87 --------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTV 140 (320)
T ss_pred --------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEE
Confidence 026899999999999999999999999999999999999998888899999999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChH
Q 019414 161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID 238 (341)
Q Consensus 161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~ 238 (341)
+|+|+ |++|++++++++.+|+ .|+++..++++.+.++++|++.+++..+.+ +.+.+...+.+ ++|++|||+++ .
T Consensus 141 lI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~ 216 (320)
T cd05286 141 LVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGVGK-D 216 (320)
T ss_pred EEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCchh--HHHHHHHHcCCCCeeEEEECCCc-H
Confidence 99995 9999999999999999 788888999999999999998888766544 77778877766 89999999987 6
Q ss_pred HHHHHHHHhcCCCcEEEEEccCCCCccccccccee-eecceEEEeeecCCCCC-----CCHHHHHHHHHCCCCCCCCcee
Q 019414 239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELEKFIT 312 (341)
Q Consensus 239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~ 312 (341)
....++++++++ |+++.+|..... ...+....+ .+++++.+......... ..++.+++++.++.+.+. .+
T Consensus 217 ~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 292 (320)
T cd05286 217 TFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IG 292 (320)
T ss_pred hHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--cc
Confidence 888999999998 999999865432 111111112 56666654433222111 235568888888877654 56
Q ss_pred eeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 313 HRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 313 ~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+.|++++++++++.+.+++. .|+++++
T Consensus 293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 293 KRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred ceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 88999999999999987775 4888754
No 103
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=5.3e-30 Score=234.43 Aligned_cols=285 Identities=18% Similarity=0.199 Sum_probs=211.1
Q ss_pred CccccccCCcCcceeeec--cCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGF--QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~--~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||++++++|+.|..... ......+|.++|||++|+|+++| ++++++||+|++.+..
T Consensus 31 ~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~------------------- 89 (326)
T cd08289 31 LIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD------------------- 89 (326)
T ss_pred EEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc-------------------
Confidence 478999999999854432 12223468899999999999954 5789999999976310
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc--C-CC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA--K-PE 155 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~-~~ 155 (341)
.+ ....|+|++|+.++++.++++|+++++++++.+++.+.|||+++.... . ..
T Consensus 90 --------------~~----------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~ 145 (326)
T cd08289 90 --------------LG----------VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTP 145 (326)
T ss_pred --------------cC----------CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCC
Confidence 00 012379999999999999999999999999999999999998865432 3 34
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
++++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++..+. ..+.++..+++++|++||++
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~d~vld~~ 221 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREEL---QEESIKPLEKQRWAGAVDPV 221 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchhH---HHHHHHhhccCCcCEEEECC
Confidence 5789999987 9999999999999999 78998899999999999999888876543 23445555445899999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC---CCCc
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE---LEKF 310 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~ 310 (341)
|+ ..++.++++++++ |+++.+|..... ..+.. ...+.+++++.+...... +.....++++.+.+ .+. ....
T Consensus 222 g~-~~~~~~~~~l~~~-G~~i~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 296 (326)
T cd08289 222 GG-KTLAYLLSTLQYG-GSVAVSGLTGGG-EVETTVFPFILRGVNLLGIDSVEC-PMELRRRIWRRLAT-DLKPTQLLNE 296 (326)
T ss_pred cH-HHHHHHHHHhhcC-CEEEEEeecCCC-CCCcchhhhhhccceEEEEEeEec-CchHHHHHHHHHHh-hcCccccccc
Confidence 87 7889999999998 999999975322 12211 222367888887653211 00123334443332 222 1223
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCIISM 339 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~ 339 (341)
+++.++++++++|++.+.+++.. |+|+++
T Consensus 297 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 297 IKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 57899999999999999888764 888763
No 104
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=8e-30 Score=230.21 Aligned_cols=281 Identities=23% Similarity=0.356 Sum_probs=219.3
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|+...... ..+.+|.++|+|++|+|+++|++++++++||+|++....
T Consensus 11 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~------------------- 71 (303)
T cd08251 11 RIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE------------------- 71 (303)
T ss_pred EEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC-------------------
Confidence 47889999999986654332 223568899999999999999999999999999976310
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
..|+|++|+.++.+.++++|++++++++++++..+.+||+++ +...+++|+
T Consensus 72 ----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~ 122 (303)
T cd08251 72 ----------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGE 122 (303)
T ss_pred ----------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCC
Confidence 136999999999999999999999999999999999999996 578899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ |.+|++++|+++.+|+ +++++.+++++.+.++++|++.+++....+ +.+.+...+++ ++|+++|++++
T Consensus 123 ~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~~~ 199 (303)
T cd08251 123 HILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVDVVINTLSG 199 (303)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCceEEEECCcH
Confidence 9999965 9999999999999999 899998999999999999998888876655 77778888776 89999999965
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC---CCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN---YKP---RTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~---~~~~~~~~~~~~~~~i~~~~~ 310 (341)
......+++++++ |+++.++..............+.++..+....+.. ..+ .+.+.++++++.++.+.+ +
T Consensus 200 -~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~ 275 (303)
T cd08251 200 -EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--T 275 (303)
T ss_pred -HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--C
Confidence 6888899999998 99999876432211111111122233222221110 111 124667888888887654 3
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCI 336 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~v 336 (341)
.++.|++++++++++.+.+++.. |++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~iv 302 (303)
T cd08251 276 VSRIFPFDDIGEAYRYLSDRENIGKVV 302 (303)
T ss_pred CceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 56889999999999999877654 665
No 105
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=1.7e-29 Score=231.98 Aligned_cols=283 Identities=19% Similarity=0.214 Sum_probs=221.0
Q ss_pred CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||+.++++|+.|+........ ..+|.++|||++|+|+++|+++..+++||+|++....
T Consensus 34 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------- 93 (336)
T cd08252 34 LVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI-------------------- 93 (336)
T ss_pred EEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCC--------------------
Confidence 4788999999998554322221 2357799999999999999999999999999965210
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC---
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER--- 156 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~--- 156 (341)
...|+|++|+.++.+.++++|++++.++++.+++.+.+||+++.+...+.+
T Consensus 94 --------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~ 147 (336)
T cd08252 94 --------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAE 147 (336)
T ss_pred --------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcC
Confidence 013699999999999999999999999999999999999999878788887
Q ss_pred --CCEEEEECC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 157 --GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 157 --g~~vlI~G~-g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
|++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.++++|++.+++... + +.+.++...++++|++||
T Consensus 148 ~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~ 223 (336)
T cd08252 148 NEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ-D--LAEQLEALGIEPVDYIFC 223 (336)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEE
Confidence 999999985 999999999999999 7 8999989999999999999988887764 3 666666544448999999
Q ss_pred ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC--CC-------CCCHHHHHHHHHCC
Q 019414 233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--KP-------RTDLPSVVDMYMNK 303 (341)
Q Consensus 233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~-------~~~~~~~~~~~~~~ 303 (341)
++|+...+..++++++++ |+++.+|... ..++.. ....+++++.+...... .. ...++.+++++.++
T Consensus 224 ~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (336)
T cd08252 224 LTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EPLDLG-PLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAG 299 (336)
T ss_pred ccCcHHHHHHHHHHhcCC-CEEEEecCCC--Ccccch-hhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCC
Confidence 998777899999999998 9999998642 122221 11256777766544321 00 12367788999999
Q ss_pred CCCCCCc-eeeeecCCcHHHHHHHHhcCCcc-eEEE
Q 019414 304 QLELEKF-ITHRIPFSEINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 304 ~i~~~~~-~~~~~~~~~i~ea~~~~~~~~~~-k~vl 337 (341)
.+.+... ..+.++++++++|++.+.+++.. |+++
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 335 (336)
T cd08252 300 KLKTTLTETLGPINAENLREAHALLESGKTIGKIVL 335 (336)
T ss_pred CEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence 7764321 12457999999999999887754 7775
No 106
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=8.8e-30 Score=228.12 Aligned_cols=278 Identities=22% Similarity=0.308 Sum_probs=220.9
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
+||+.++++|+.|+..... ..+.+|.++|||++|+|+++|++++++++||+|++..
T Consensus 4 ~i~v~~~~~~~~d~~~~~g-~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------------------- 59 (293)
T cd05195 4 EVEVKAAGLNFRDVLVALG-LLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------------------- 59 (293)
T ss_pred EEEEEEEecCHHHHHHHhC-CCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-----------------------
Confidence 5789999999999665432 2345688999999999999999999999999999762
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+++|++|
T Consensus 60 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 112 (293)
T cd05195 60 ---------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESV 112 (293)
T ss_pred ---------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEE
Confidence 26999999999999999999999999999999999999998788899999999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC--CceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|+|+ |.+|++++++|+..|+ +++++.+++++.+.+++.+ ++.+++....+ +.+.+++.+.+ ++|+++|++|+
T Consensus 113 lv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 189 (293)
T cd05195 113 LIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLNSLSG 189 (293)
T ss_pred EEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEeCCCc
Confidence 99975 9999999999999999 7888888999999998888 67777765544 77788888766 89999999998
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC---C---CCCHHHHHHHHHCCCCCCCCc
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK---P---RTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~---~~~~~~~~~~~~~~~i~~~~~ 310 (341)
. .++.++++++++ |+++.++..............+.+++.+....+.... + .+.++.+++++.++++. +.
T Consensus 190 ~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 265 (293)
T cd05195 190 E-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PL 265 (293)
T ss_pred h-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cC
Confidence 5 889999999997 9999998654321111111223344555444322110 0 12467788889898765 34
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCI 336 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~v 336 (341)
.+..+++++++++++.+.+++.. |++
T Consensus 266 ~~~~~~~~~~~~a~~~~~~~~~~~~iv 292 (293)
T cd05195 266 PPTVVPSASEIDAFRLMQSGKHIGKVV 292 (293)
T ss_pred CCeeechhhHHHHHHHHhcCCCCceec
Confidence 56789999999999999877654 665
No 107
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=7.7e-30 Score=228.26 Aligned_cols=277 Identities=22% Similarity=0.335 Sum_probs=219.4
Q ss_pred CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 80 (341)
.||+.++++|+.|+..... ..+ .|.++|||++|+|+++|++++++++||+|++..
T Consensus 1 ~i~v~~~~i~~~d~~~~~g-~~~-~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 1 EVEVRAAGLNFRDVLIALG-LLP-GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred CeeEEEEecCHHHHHHhcC-CCC-CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 3789999999999665432 222 367899999999999999999999999999762
Q ss_pred cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414 81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 160 (341)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 160 (341)
.|+|++|+.++.+.++++|+++++++++.+++.+.++|+++.+...+.+|++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 26899999999999999999999999999999999999998788899999999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--ceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|+|+ |.+|++++++|+..|+ +|+++.+++++.+.++++|+ +.++++.+.+ +.+.+...+++ ++|.++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence 99985 9999999999999999 78999899999999999998 6777766554 77777777776 89999999985
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC--C---CCCCHHHHHHHHHCCCCCCCCce
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--K---PRTDLPSVVDMYMNKQLELEKFI 311 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~---~~~~~~~~~~~~~~~~i~~~~~~ 311 (341)
..++.++++++++ |+++.+|..............+.+++++.+..+... . ..+.++.+++++.++++.+. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 7888999999997 999999864321111111112344555555433211 0 01246678888888877653 4
Q ss_pred eeeecCCcHHHHHHHHhcCCc-ceEE
Q 019414 312 THRIPFSEINKAFEYMVKGEG-LRCI 336 (341)
Q Consensus 312 ~~~~~~~~i~ea~~~~~~~~~-~k~v 336 (341)
++.|++++++++++.+..++. .|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 578999999999999988765 3655
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=4.8e-30 Score=235.00 Aligned_cols=275 Identities=20% Similarity=0.262 Sum_probs=215.2
Q ss_pred CccccccCCcCcceeeeccC--CC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|..+.... .. ...+.++|+|++|+|+++|++ ++++||+|+..
T Consensus 36 ~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-------------------- 93 (329)
T cd05288 36 LVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF-------------------- 93 (329)
T ss_pred EEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--------------------
Confidence 57899999999664332221 11 123568999999999999964 79999999965
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeec-CceEECCCCCC--chhhhh-ccccchhhhhhhhhhc
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKINPLAP--LDKVCI-LSCGVSTGLGATLNVA 152 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~~l~~~~ 152 (341)
++|++|+.++. +.++++|++++ +.++++ +++++.|||+++....
T Consensus 94 --------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~ 141 (329)
T cd05288 94 --------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIG 141 (329)
T ss_pred --------------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhcc
Confidence 48999999999 99999999995 445555 8999999999988878
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
.+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+++ +|++.++++.+.+ +.+.+...+++++|++
T Consensus 142 ~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~v 218 (329)
T cd05288 142 KPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKTPD--LAEALKEAAPDGIDVY 218 (329)
T ss_pred CCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCChh--HHHHHHHhccCCceEE
Confidence 8999999999985 9999999999999999 88989899999999988 9998888877654 7777777776689999
Q ss_pred EeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccc-----cccceeeecceEEEeeecCCCC--CCCHHHHHHHHHCC
Q 019414 231 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-----TKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNK 303 (341)
Q Consensus 231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~ 303 (341)
||++|+ ..+..++++++++ |+++.+|......... .....+.+++++.+........ .+.+.++++++.++
T Consensus 219 i~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 296 (329)
T cd05288 219 FDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEG 296 (329)
T ss_pred EEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCC
Confidence 999987 6889999999998 9999998654322111 0122345777777765433211 13467788999999
Q ss_pred CCCCCCceeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414 304 QLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 336 (341)
Q Consensus 304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~v 336 (341)
.+.+.+ ...+++++++++++.+.+++.. |++
T Consensus 297 ~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvv 328 (329)
T cd05288 297 KLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLV 328 (329)
T ss_pred Cccccc--cccccHHHHHHHHHHHhcCCCcccee
Confidence 887653 3558999999999999877654 665
No 109
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=2.3e-29 Score=230.01 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=212.0
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||++++++|+.|+....... ...+|.++|||++|+|+. +++..|++||+|++.....
T Consensus 30 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~------------------ 89 (323)
T TIGR02823 30 LIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGL------------------ 89 (323)
T ss_pred EEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCC------------------
Confidence 478999999999865432222 134688999999999998 5678899999999763100
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh--cCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPER 156 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~ 156 (341)
+ ....|++++|+.++.+.++++|+++++++++.++..+.+|+.++... ..+.+
T Consensus 90 ---------------~----------~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~ 144 (323)
T TIGR02823 90 ---------------G----------VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTP 144 (323)
T ss_pred ---------------C----------CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCC
Confidence 0 00136999999999999999999999999999999999998876443 34889
Q ss_pred CC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 157 GS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 157 g~-~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
++ +|+|+|+ |.+|++++++|+.+|+ +++++..++++++.++++|++.+++..+.+ ..++....+++|+++||+
T Consensus 145 ~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~vld~~ 219 (323)
T TIGR02823 145 EDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDREDLS----PPGKPLEKERWAGAVDTV 219 (323)
T ss_pred CCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEccccHH----HHHHHhcCCCceEEEECc
Confidence 98 9999997 9999999999999999 677777888888999999998888765432 234444444799999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~ 310 (341)
|+ +.+.+++++++++ |+++.+|..... ....+ ...+.+++++.+........ ...++.+.+++..+.+.. .
T Consensus 220 g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 294 (323)
T TIGR02823 220 GG-HTLANVLAQLKYG-GAVAACGLAGGP-DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I 294 (323)
T ss_pred cH-HHHHHHHHHhCCC-CEEEEEcccCCC-CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c
Confidence 87 5788999999998 999999965322 12221 12236778887765432111 012455666666776543 2
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCIIS 338 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~ 338 (341)
.+.++++++++|++.+.+++.. |+|++
T Consensus 295 -~~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 295 -TREITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred -eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence 4689999999999999888765 88875
No 110
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=4.2e-29 Score=227.45 Aligned_cols=287 Identities=26% Similarity=0.365 Sum_probs=224.6
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|+++++++|+.|....... ..+.+|.++|||++|+|+++|+++++|++||+|++.+..
T Consensus 31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~------------------- 91 (325)
T cd08253 31 LVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG------------------- 91 (325)
T ss_pred EEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc-------------------
Confidence 36888999999986654322 234568899999999999999999999999999987310
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
+ ....|++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.+|+
T Consensus 92 ----------------~---------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~ 146 (325)
T cd08253 92 ----------------W---------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGE 146 (325)
T ss_pred ----------------c---------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCC
Confidence 0 001368999999999999999999999999999999999999988878999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ |++|++++++++..|. .|+++++++++.+.++++|++.+++....+ +.+.+.+.+.+ ++|+++|+.+.
T Consensus 147 ~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 223 (325)
T cd08253 147 TVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN 223 (325)
T ss_pred EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHHcCCCceEEEEECCch
Confidence 9999986 9999999999999998 888888999999999999998888776555 77777777665 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCceee
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITH 313 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~ 313 (341)
...+..+++++++ |+++.++............ .+.++..+.+.......+ .+.++.+.+++.++.+... .++
T Consensus 224 -~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~ 298 (325)
T cd08253 224 -VNLAKDLDVLAPG-GRIVVYGSGGLRGTIPINP-LMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAR 298 (325)
T ss_pred -HHHHHHHHhhCCC-CEEEEEeecCCcCCCChhH-HHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--ccc
Confidence 5678889999997 9999998644222222211 134566666554332211 1235556677778866543 568
Q ss_pred eecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 314 RIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 314 ~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
.+++++++++++.+.+++. .|+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 299 EYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred EEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 8999999999999987765 4888753
No 111
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=6.9e-29 Score=221.95 Aligned_cols=247 Identities=27% Similarity=0.416 Sum_probs=195.8
Q ss_pred CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccc
Q 019414 24 LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 103 (341)
Q Consensus 24 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 103 (341)
.+|.++|||++|+|+++|++++++++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 478999999999999999999999999999976
Q ss_pred cccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Q 019414 104 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 183 (341)
Q Consensus 104 ~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~ 183 (341)
++|++|+.++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+|.++
T Consensus 52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 36899999999999999999999998888 7899999986 4788999999999988999999999999999944
Q ss_pred EEEEcCChhhHHHHHHcC-CceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414 184 IIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262 (341)
Q Consensus 184 vv~v~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~ 262 (341)
|+++++++++.+.++++| ++.+++.... ...+.++|++||+++....++..+++++++ |+++.+|....
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~ 194 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGL 194 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccchh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCC
Confidence 999999999999999999 4544433210 112238999999998777889999999998 99999986544
Q ss_pred CcccccccceeeecceEEEeeecCC---------CCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCC--
Q 019414 263 DAVFMTKPINVLNERTLKGTFFGNY---------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-- 331 (341)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~-- 331 (341)
. ..........+.+++.+...... ...+.++++++++.++.+.. .+.+.+++++++++++.+.+++
T Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~ 271 (277)
T cd08255 195 K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFEDPPE 271 (277)
T ss_pred C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcCCcc
Confidence 3 21111112224445555443211 11256889999999997654 3568899999999999998873
Q ss_pred cceEEE
Q 019414 332 GLRCII 337 (341)
Q Consensus 332 ~~k~vl 337 (341)
.+|+++
T Consensus 272 ~~k~~~ 277 (277)
T cd08255 272 CLKVVL 277 (277)
T ss_pred ceeeeC
Confidence 457764
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=9.8e-29 Score=228.57 Aligned_cols=290 Identities=19% Similarity=0.256 Sum_probs=209.7
Q ss_pred CccccccCCcCcceeeeccCC-CCC-CCccccccceEEEEEecCCCC-CCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ-TPL-FPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~-~~~-~p~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~ 77 (341)
+|++.++++|+.|........ ... .|.++|+|++|+|+++|++++ .|++||+|++.....|+
T Consensus 32 ~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~--------------- 96 (352)
T cd08247 32 VVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYG--------------- 96 (352)
T ss_pred EEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCC---------------
Confidence 478899999999965532211 112 378999999999999999998 89999999976321110
Q ss_pred ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC----ceEECCCCCCchhhhhccccchhhhhhhhhhc-
Q 019414 78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCILSCGVSTGLGATLNVA- 152 (341)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~- 152 (341)
..|+|++|++++.. .++++|+++++++++.++..+.|||+++.+..
T Consensus 97 -----------------------------~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~ 147 (352)
T cd08247 97 -----------------------------GQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQ 147 (352)
T ss_pred -----------------------------CCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhh
Confidence 13799999999987 78999999999999999999999999987766
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceecCCCCCCh--hHHHHHHHHh-cCCc
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMT-NGGV 227 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~i~~~~-~~~~ 227 (341)
.+++|++++|+|+ |.+|++++++|+.+|. +.++++. ++++++.++++|++.+++.++.++ .+.+.++..+ ++++
T Consensus 148 ~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T cd08247 148 KLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKF 226 (352)
T ss_pred ccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCc
Confidence 7999999999987 8999999999998754 3567775 455566788999988888765431 1333344444 3489
Q ss_pred cEEEeccCChHHHHHHHHHhc---CCCcEEEEEccCCC-Cccc-c--------cccceeeecceEEEeee---cCCCCCC
Q 019414 228 DRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSK-DAVF-M--------TKPINVLNERTLKGTFF---GNYKPRT 291 (341)
Q Consensus 228 d~vld~~g~~~~~~~~~~~l~---~~~g~~v~~g~~~~-~~~~-~--------~~~~~~~~~~~~~g~~~---~~~~~~~ 291 (341)
|++|||+|+......++++++ ++ |+++.++.... +... . .....+.++..+..... .......
T Consensus 227 d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (352)
T cd08247 227 DLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNAD 305 (352)
T ss_pred eEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHH
Confidence 999999998678889999999 97 99997742211 1000 0 00011112221111100 0001113
Q ss_pred CHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 292 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 292 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
.++.+++++.++.+.+ ++++.++++++++|++.+.+++. +|++++
T Consensus 306 ~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 306 WIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred HHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 5777889999997653 36788999999999999988775 488875
No 113
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=1.4e-28 Score=223.68 Aligned_cols=279 Identities=23% Similarity=0.327 Sum_probs=221.7
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|+...... ....+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~-------------------- 90 (323)
T cd05276 31 LIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA-------------------- 90 (323)
T ss_pred EEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecC--------------------
Confidence 47889999999886543221 22346889999999999999999999999999997621
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.+...+.+++
T Consensus 91 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~ 141 (323)
T cd05276 91 -----------------------------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGE 141 (323)
T ss_pred -----------------------------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCC
Confidence 268999999999999999999999999999999999999988878899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ |++|++++++++..|+ .++.+.+++++.+.++++|++.+++....+ +.+.+...+.+ ++|++||+.|+
T Consensus 142 ~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~ 218 (323)
T cd05276 142 TVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTED--FAEEVKEATGGRGVDVILDMVGG 218 (323)
T ss_pred EEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCchh--HHHHHHHHhCCCCeEEEEECCch
Confidence 9999996 9999999999999999 788898999999999999988887766544 66777777665 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCCC-------CCHHHHHHHHHCCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQLELE 308 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~i~~~ 308 (341)
..+...++++.++ |+++.++...... ..+. ...+.+++++.++........ ..++++++++.++++.+
T Consensus 219 -~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (323)
T cd05276 219 -DYLARNLRALAPD-GRLVLIGLLGGAKAELDL-APLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP- 294 (323)
T ss_pred -HHHHHHHHhhccC-CEEEEEecCCCCCCCCch-HHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC-
Confidence 4578899999997 9999998643221 1221 112357788877664432110 12466778888887754
Q ss_pred CceeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414 309 KFITHRIPFSEINKAFEYMVKGEGL-RCI 336 (341)
Q Consensus 309 ~~~~~~~~~~~i~ea~~~~~~~~~~-k~v 336 (341)
+.++.|++++++++++.+.+++.. |++
T Consensus 295 -~~~~~~~~~~~~~a~~~~~~~~~~~kvv 322 (323)
T cd05276 295 -VIDKVFPLEEAAEAHRRMESNEHIGKIV 322 (323)
T ss_pred -CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 367889999999999999877654 665
No 114
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=4e-29 Score=230.91 Aligned_cols=281 Identities=23% Similarity=0.318 Sum_probs=209.8
Q ss_pred CccccccCCcCcceeeeccCC----------------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----------------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDC 64 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----------------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c 64 (341)
+|++.++++|+.|........ ...+|.++|||++|+|+.+|++++++++||||++.+..
T Consensus 33 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~----- 107 (350)
T cd08248 33 LIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP----- 107 (350)
T ss_pred EEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCC-----
Confidence 478899999999965432210 23568899999999999999999999999999986321
Q ss_pred hhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhh
Q 019414 65 RHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144 (341)
Q Consensus 65 ~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta 144 (341)
...|+|++|+.++.+.++++|++++.++++.+++.+.||
T Consensus 108 -----------------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta 146 (350)
T cd08248 108 -----------------------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTA 146 (350)
T ss_pred -----------------------------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHH
Confidence 013799999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCC----CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHH
Q 019414 145 LGATLNVAKPER----GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 219 (341)
Q Consensus 145 ~~~l~~~~~~~~----g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i 219 (341)
|+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ .|+++.++ ++.+.++++|++.+++....+ +.+.+
T Consensus 147 ~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l 222 (350)
T cd08248 147 WSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNNED--FEEEL 222 (350)
T ss_pred HHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCChh--HHHHH
Confidence 999877777654 999999985 9999999999999999 67777654 678888999998888765543 55544
Q ss_pred HHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc--cccc------c-ceeeecce-E-EEe---eec
Q 019414 220 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTK------P-INVLNERT-L-KGT---FFG 285 (341)
Q Consensus 220 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~------~-~~~~~~~~-~-~g~---~~~ 285 (341)
... +++|++||++|. .....++++++++ |+++.++....... .... . .+...... + ... +..
T Consensus 223 ~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
T cd08248 223 TER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF 298 (350)
T ss_pred Hhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE
Confidence 332 479999999987 4889999999998 99999985432111 0000 0 00000000 0 000 000
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcc-eEEE
Q 019414 286 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl 337 (341)
.......++++++++.++.+.+ .+++.|++++++++++.+.+++.. |+++
T Consensus 299 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 299 FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 0111245888999999997654 367889999999999999877654 7765
No 115
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=4.7e-28 Score=221.36 Aligned_cols=283 Identities=16% Similarity=0.166 Sum_probs=213.3
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+||+.++++|+.|........ .+.+|.++|||++|+|++ ++++.+++||+|++.... .+
T Consensus 31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~--------------~~--- 91 (324)
T cd08288 31 TVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG--------------VG--- 91 (324)
T ss_pred EEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCcc--------------CC---
Confidence 478899999999865432221 234578899999999999 778889999999976210 00
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh--hhcCCC-
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVAKPE- 155 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~- 155 (341)
....|+|++|++++.+.++++|++++.++++.++..+++++.++. +.....
T Consensus 92 --------------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~ 145 (324)
T cd08288 92 --------------------------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTP 145 (324)
T ss_pred --------------------------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCC
Confidence 001369999999999999999999999999999999999987754 123445
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
++++|+|+|+ |.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++.+. ...++..+.+++|.++|++
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~ 220 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAEL----SEPGRPLQKERWAGAVDTV 220 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcchh----hHhhhhhccCcccEEEECC
Confidence 6789999997 9999999999999999 78888889999999999999988887542 2345555555789999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~ 310 (341)
++ ..+...+..+..+ |+++.+|..... ...... ..+.+++++.+........ .+.++.+.+++.++.+.+
T Consensus 221 ~~-~~~~~~~~~~~~~-g~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (324)
T cd08288 221 GG-HTLANVLAQTRYG-GAVAACGLAGGA-DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA--- 294 (324)
T ss_pred cH-HHHHHHHHHhcCC-CEEEEEEecCCC-CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---
Confidence 87 5677888889987 999999864321 111111 2236788888765332211 124556677777886643
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCIISM 339 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~ 339 (341)
+++.+++++++++++.+.+++.. |+++++
T Consensus 295 i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 295 LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 36899999999999999888864 888764
No 116
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2e-28 Score=224.36 Aligned_cols=277 Identities=21% Similarity=0.284 Sum_probs=210.3
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|........ ...+|.++|||++|+|+.+|++++.+++||+|++...
T Consensus 31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~-------------------- 90 (331)
T cd08273 31 VVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR-------------------- 90 (331)
T ss_pred EEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC--------------------
Confidence 478899999998865432222 2246889999999999999999999999999997631
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|++++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.+|+
T Consensus 91 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~ 141 (331)
T cd08273 91 -----------------------------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQ 141 (331)
T ss_pred -----------------------------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCC
Confidence 168999999999999999999999999999999999999987778899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
+|+|+|+ |.+|++++++|+..|+ .|+.+.. +++.+.++++|+.. ++....+ +.+. ...++++|+++|++++.
T Consensus 142 ~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~--~~~~--~~~~~~~d~vl~~~~~~ 214 (331)
T cd08273 142 RVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRTKD--WLPA--MLTPGGVDVVFDGVGGE 214 (331)
T ss_pred EEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCCcc--hhhh--hccCCCceEEEECCchH
Confidence 9999986 9999999999999999 7888876 88888899999754 4444333 3333 33345899999999884
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcccccc---------------cceeeecceEEEeeecC-CC---CCCCHHHHHH
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINVLNERTLKGTFFGN-YK---PRTDLPSVVD 298 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---------------~~~~~~~~~~~g~~~~~-~~---~~~~~~~~~~ 298 (341)
....++++++++ |+++.+|........... ...+.++....+..... .. ..+.++.+++
T Consensus 215 -~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 292 (331)
T cd08273 215 -SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLD 292 (331)
T ss_pred -HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHH
Confidence 588999999998 999999865433221110 01111222222222110 00 1135778899
Q ss_pred HHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcc-eEEE
Q 019414 299 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII 337 (341)
Q Consensus 299 ~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl 337 (341)
++.++.+.+ .+++.+++++++++++.+.+++.. |+|+
T Consensus 293 ~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 293 LLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 999997754 367889999999999998877654 6664
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=5e-28 Score=220.78 Aligned_cols=286 Identities=25% Similarity=0.380 Sum_probs=223.1
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|+....... .+.+|.++|||++|+|+.+|++++++++||+|++.+...
T Consensus 31 ~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~------------------ 92 (328)
T cd08268 31 LIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD------------------ 92 (328)
T ss_pred EEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccc------------------
Confidence 467889999998866542221 234578999999999999999999999999999874211
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
....|++++|+.++.+.++++|++++.++++.+++.+.++|+++.....+.+++
T Consensus 93 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 146 (328)
T cd08268 93 --------------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGD 146 (328)
T ss_pred --------------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCC
Confidence 001368999999999999999999999999999999999999988888899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ |++|++++++++..|+ .++.+++++++.+.++++|++.+++....+ +.+.+...+.+ ++|+++++.++
T Consensus 147 ~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 223 (328)
T cd08268 147 SVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVDVVFDPVGG 223 (328)
T ss_pred EEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHhCCCCceEEEECCch
Confidence 9999987 9999999999999999 788888899999999889988888776544 77777777766 89999999988
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-eeeecceEEEeeecCCC--CC---CCHHHHHHHHHCCCCCCCCc
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK--PR---TDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~--~~---~~~~~~~~~~~~~~i~~~~~ 310 (341)
.....++++++++ |+++.++...... ...... .+.+++.+.+....... +. ..++.+.+++.++.+.+.
T Consensus 224 -~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (328)
T cd08268 224 -PQFAKLADALAPG-GTLVVYGALSGEP-TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV-- 298 (328)
T ss_pred -HhHHHHHHhhccC-CEEEEEEeCCCCC-CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--
Confidence 6788899999997 9999998654321 111111 25677777766543211 10 124445566667766543
Q ss_pred eeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 311 ITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
.+..|++++++++++.+.+++. .|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 299 VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 5688999999999999988765 488875
No 118
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=4.5e-28 Score=220.83 Aligned_cols=281 Identities=21% Similarity=0.278 Sum_probs=222.6
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|....... ....+|.++|||++|+|+.+|+++.++++||+|++...
T Consensus 31 ~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~-------------------- 90 (325)
T TIGR02824 31 LIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA-------------------- 90 (325)
T ss_pred EEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccC--------------------
Confidence 36788899998885543221 22345789999999999999999999999999997521
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|++++|+.++.+.++++|++++...+++++.++.++|+++.+...+.+++
T Consensus 91 -----------------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~ 141 (325)
T TIGR02824 91 -----------------------------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGE 141 (325)
T ss_pred -----------------------------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCC
Confidence 268999999999999999999999999999999999999988888999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++....+ +.+.++....+ ++|+++|++|+
T Consensus 142 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~ 218 (325)
T TIGR02824 142 TVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYREED--FVEVVKAETGGKGVDVILDIVGG 218 (325)
T ss_pred EEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCchh--HHHHHHHHcCCCCeEEEEECCch
Confidence 9999986 9999999999999999 788888899998889999987777665444 77777777765 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccce-eeecceEEEeeecCCCC-------CCCHHHHHHHHHCCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELE 308 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~i~~~ 308 (341)
.....++++++++ |+++.++....... ...... +.+++++.+........ ...+..++++++++.+.+
T Consensus 219 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 294 (325)
T TIGR02824 219 -SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP- 294 (325)
T ss_pred -HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC-
Confidence 5788899999997 99999986442211 222222 36788888876443211 012455778888887653
Q ss_pred CceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414 309 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS 338 (341)
Q Consensus 309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~ 338 (341)
+.++.+++++++++++.+.+++. .|++++
T Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 295 -VIDKVFPLEDAAQAHALMESGDHIGKIVLT 324 (325)
T ss_pred -ccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence 36788999999999999887765 488775
No 119
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.1e-28 Score=220.15 Aligned_cols=282 Identities=25% Similarity=0.343 Sum_probs=219.1
Q ss_pred CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|+...... .....|.++|||++|+|+.+|+++.++++||+|++....
T Consensus 31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~------------------- 91 (326)
T cd08272 31 LVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG------------------- 91 (326)
T ss_pred EEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCC-------------------
Confidence 46888999999885543222 123457899999999999999999999999999976310
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
+ . ...|++++|+.++.+.++++|+++++..++.++..+.+||+++.+..++.+|+
T Consensus 92 ----------------~--~-------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 146 (326)
T cd08272 92 ----------------L--G-------GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQ 146 (326)
T ss_pred ----------------c--C-------CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCC
Confidence 0 0 01378999999999999999999999999999999999999988888999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+++|+|+ |.+|++++++|+..|+ .|+++.++ ++.+.++++|++.+++... . +.+.+...+.+ ++|.++|++++
T Consensus 147 ~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~~~~~ 221 (326)
T cd08272 147 TVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFDTVGG 221 (326)
T ss_pred EEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEECCCh
Confidence 9999985 9999999999999999 78888777 8888899999987776543 2 56667777776 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC-----CCC---CCCHHHHHHHHHCCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN-----YKP---RTDLPSVVDMYMNKQLELE 308 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~---~~~~~~~~~~~~~~~i~~~ 308 (341)
..+..+++++.++ |+++.++... . ...... ..+++.+.+..... ..+ ...++.+++++.++.+..
T Consensus 222 -~~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~- 294 (326)
T cd08272 222 -ETLDASFEAVALY-GRVVSILGGA-T--HDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP- 294 (326)
T ss_pred -HHHHHHHHHhccC-CEEEEEecCC-c--cchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc-
Confidence 5788899999997 9999988653 1 111111 24566666554321 111 134677888888887653
Q ss_pred Ccee-eeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 309 KFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 309 ~~~~-~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+++ +.|++++++++++.+.+++. .|+++++
T Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 295 -LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred -ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 334 88999999999999987665 4888763
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.1e-27 Score=216.75 Aligned_cols=282 Identities=21% Similarity=0.312 Sum_probs=218.3
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|........ .+.+|.++|||++|+|+.+|+++.++++||+|++...
T Consensus 30 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-------------------- 89 (337)
T cd08275 30 RVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR-------------------- 89 (337)
T ss_pred EEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC--------------------
Confidence 478889999998865432222 2345779999999999999999999999999997621
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|+|++|+.++.+.++++|+++++++++.+++++.++|+++.....+++|+
T Consensus 90 -----------------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 140 (337)
T cd08275 90 -----------------------------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQ 140 (337)
T ss_pred -----------------------------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCC
Confidence 268999999999999999999999999999999999999988888999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
+|+|+|+ |.+|++++++|+.. +. .++.. .++++.+.++++|++.+++....+ +.+.++..+++++|+++|++|+
T Consensus 141 ~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~~~g~ 216 (337)
T cd08275 141 SVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLDALGG 216 (337)
T ss_pred EEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCCCc--HHHHHHHHhCCCceEEEECCcH
Confidence 9999997 99999999999988 43 33333 345678888889998888776655 7777877776689999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcc--ccc-------------c-cceeeecceEEEeeecCCC-CC----CCHHH
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAV--FMT-------------K-PINVLNERTLKGTFFGNYK-PR----TDLPS 295 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~-------------~-~~~~~~~~~~~g~~~~~~~-~~----~~~~~ 295 (341)
.....++++++++ |+++.+|....... ... . ...+.+++++.+....... .. ..+++
T Consensus 217 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (337)
T cd08275 217 -EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDK 294 (337)
T ss_pred -HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHH
Confidence 5778899999997 99999986542211 110 0 1124567777776543111 00 13667
Q ss_pred HHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 296 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 296 ~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
+++++.++.+.+. .++.|++++++++++.+.+++. .|+++++
T Consensus 295 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 295 LLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 8888888876543 5688999999999999987765 4888764
No 121
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.1e-27 Score=216.75 Aligned_cols=285 Identities=22% Similarity=0.316 Sum_probs=215.9
Q ss_pred CccccccCCcCcceeeeccCCCC-CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTP-LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 79 (341)
+||+.++++|+.|+......... .+|.++|||++|+|+.+|++++++++||+|++....
T Consensus 31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-------------------- 90 (325)
T cd08271 31 LVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL-------------------- 90 (325)
T ss_pred EEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC--------------------
Confidence 47888999999886543322211 236789999999999999999999999999987311
Q ss_pred ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414 80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 159 (341)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 159 (341)
...|++++|+.++.+.++++|++++..+++.+++.+.+|++++.+...+.+|++
T Consensus 91 --------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~ 144 (325)
T cd08271 91 --------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRT 144 (325)
T ss_pred --------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCE
Confidence 012689999999999999999999999999999999999999888889999999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI 237 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 237 (341)
++|+|+ |.+|++++++++..|+ .|+.+. ++++.+.++++|++.+++....+ +.+.+...+.+ ++|.+++++++.
T Consensus 145 vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~ 220 (325)
T cd08271 145 ILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYNDED--VCERIKEITGGRGVDAVLDTVGGE 220 (325)
T ss_pred EEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCCcc--HHHHHHHHcCCCCCcEEEECCCcH
Confidence 999997 8999999999999999 677765 66778888889998888776655 67777777766 899999999884
Q ss_pred HHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCC-----CCCCCHHHHHHHHHCCCCCCCCce
Q 019414 238 DNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNY-----KPRTDLPSVVDMYMNKQLELEKFI 311 (341)
Q Consensus 238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~ 311 (341)
.....++++++. |+++.++....... ..+......+++.+........ ...+.++++++++.++.+.+. .
T Consensus 221 -~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~ 296 (325)
T cd08271 221 -TAAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--V 296 (325)
T ss_pred -hHHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--c
Confidence 556789999998 99998874432111 1111111223333333221111 011235678888988877543 5
Q ss_pred eeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414 312 THRIPFSEINKAFEYMVKGEG-LRCIISM 339 (341)
Q Consensus 312 ~~~~~~~~i~ea~~~~~~~~~-~k~vl~~ 339 (341)
++.++++++.++++.+.+++. .|+++++
T Consensus 297 ~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 297 IEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 688999999999999987765 4888753
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.4e-27 Score=217.30 Aligned_cols=278 Identities=23% Similarity=0.311 Sum_probs=207.3
Q ss_pred CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+|++.++++|+.|........ ...+|.++|||++|+|+++|+++.++++||+|++....
T Consensus 30 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------------- 92 (319)
T cd08267 30 LVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP----------------- 92 (319)
T ss_pred EEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC-----------------
Confidence 468889999999865532222 12357789999999999999999999999999977321
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...|+|++|+.++.+.++++|++++.++++.+++.+.+||+++.+...+++
T Consensus 93 -----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 143 (319)
T cd08267 93 -----------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKP 143 (319)
T ss_pred -----------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCC
Confidence 012689999999999999999999999999999999999999877777999
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT 234 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~ 234 (341)
|++++|+|+ |++|++++++|+..|+ +|+++.++ ++.+.++++|++.+++....+ +. ...+.+ ++|+++||+
T Consensus 144 g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~d~vi~~~ 216 (319)
T cd08267 144 GQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---ALTAGGEKYDVIFDAV 216 (319)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---hhccCCCCCcEEEECC
Confidence 999999997 9999999999999999 78887765 888888999998888766544 33 333444 899999999
Q ss_pred CC-hHHHHHHHHHhcCCCcEEEEEccCCCCccccc---ccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCc
Q 019414 235 GN-IDNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310 (341)
Q Consensus 235 g~-~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 310 (341)
++ .......+..++++ |+++.+|.......... ..........+....... ..+.++++++++.++++.+ +
T Consensus 217 ~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~ 291 (319)
T cd08267 217 GNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--V 291 (319)
T ss_pred CchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCeee--e
Confidence 84 23334444458897 99999986543322111 000011111122111111 1356888999999987653 4
Q ss_pred eeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414 311 ITHRIPFSEINKAFEYMVKGEGL-RCI 336 (341)
Q Consensus 311 ~~~~~~~~~i~ea~~~~~~~~~~-k~v 336 (341)
+++.|++++++++++.+.+++.. |++
T Consensus 292 ~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 292 IDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred eeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 67899999999999999877654 655
No 123
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=2.7e-27 Score=215.40 Aligned_cols=280 Identities=24% Similarity=0.427 Sum_probs=222.4
Q ss_pred CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
+|++.++++|+.|........ .+..|.++|||++|+|+.+|++++++++||+|+....
T Consensus 31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-------------------- 90 (323)
T cd08241 31 RIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG-------------------- 90 (323)
T ss_pred EEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC--------------------
Confidence 367788899988855432211 2234668999999999999999999999999997630
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 158 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 158 (341)
.|++++|+.++.+.++++|++++..+++.+...+.+|++++.+...+.+++
T Consensus 91 -----------------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 141 (323)
T cd08241 91 -----------------------------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGE 141 (323)
T ss_pred -----------------------------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCC
Confidence 268999999999999999999999998889999999999987778899999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|+|+|+ |.+|++++++|+..|+ .|+.++.++++.+.++++|++.+++....+ +.+.+...+++ ++|.++|++|+
T Consensus 142 ~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~ 218 (323)
T cd08241 142 TVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVDVVYDPVGG 218 (323)
T ss_pred EEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCCcc--HHHHHHHHcCCCCcEEEEECccH
Confidence 9999997 9999999999999999 788888899999999999988877766544 77778887776 89999999987
Q ss_pred hHHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCCCC------CCCHHHHHHHHHCCCCCCCC
Q 019414 237 IDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKP------RTDLPSVVDMYMNKQLELEK 309 (341)
Q Consensus 237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~i~~~~ 309 (341)
..+..++++++++ |+++.++....... +... ..+.+++++.+.....+.. ...++++++++.++.+.+
T Consensus 219 -~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (323)
T cd08241 219 -DVFEASLRSLAWG-GRLLVIGFASGEIPQIPAN-LLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP-- 293 (323)
T ss_pred -HHHHHHHHhhccC-CEEEEEccCCCCcCcCCHH-HHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--
Confidence 6788899999998 99999986433221 1111 2245677777765433211 124677888998987653
Q ss_pred ceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414 310 FITHRIPFSEINKAFEYMVKGEG-LRCII 337 (341)
Q Consensus 310 ~~~~~~~~~~i~ea~~~~~~~~~-~k~vl 337 (341)
+.+..|++++++++++.+.+++. .|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 294 HVSAVFPLEQAAEALRALADRKATGKVVL 322 (323)
T ss_pred ccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 36788999999999998877665 47765
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.96 E-value=1.4e-27 Score=215.99 Aligned_cols=272 Identities=21% Similarity=0.328 Sum_probs=211.6
Q ss_pred CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 76 (341)
+||+.++++|+.|........ ...+|.++|||++|+|+.+|+++.++++||+|++.+..
T Consensus 31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~----------------- 93 (309)
T cd05289 31 LVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF----------------- 93 (309)
T ss_pred EEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC-----------------
Confidence 478889999998865432221 23458899999999999999999999999999977310
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414 77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 156 (341)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 156 (341)
...|+|++|+.++...++++|+++++..++.++..+.++++++.+...+.+
T Consensus 94 -----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 144 (309)
T cd05289 94 -----------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKA 144 (309)
T ss_pred -----------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCC
Confidence 012689999999999999999999999999999999999999877777999
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+++++|+|+ |.+|++++++++..|+ .|+++..++ +.+.++++|++.+++....+ +.+ ...++++|+++|+++
T Consensus 145 ~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~---~~~~~~~d~v~~~~~ 217 (309)
T cd05289 145 GQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTKGD--FER---AAAPGGVDAVLDTVG 217 (309)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCCCc--hhh---ccCCCCceEEEECCc
Confidence 999999996 9999999999999999 777777777 88888889988887766544 332 222238999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (341)
+ .....++++++++ |+++.++....... ..+.++..+........ ...+++++++++++.+.+ ++++.|
T Consensus 218 ~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~ 286 (309)
T cd05289 218 G-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--VVDRVF 286 (309)
T ss_pred h-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--eeccEE
Confidence 7 4788999999998 99999986543211 11234444444333211 356888999999987643 367899
Q ss_pred cCCcHHHHHHHHhcCCcc-eEE
Q 019414 316 PFSEINKAFEYMVKGEGL-RCI 336 (341)
Q Consensus 316 ~~~~i~ea~~~~~~~~~~-k~v 336 (341)
++++++++++.+.+++.. |++
T Consensus 287 ~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 287 PLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred cHHHHHHHHHHHHhCCCCCcEe
Confidence 999999999998877653 655
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=1.7e-27 Score=231.02 Aligned_cols=272 Identities=16% Similarity=0.211 Sum_probs=220.6
Q ss_pred ccccCCcCcceeeeccCCCCC-CC-------ccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCC
Q 019414 4 QKHNSFNPRNFVFGFQGQTPL-FP-------RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 75 (341)
Q Consensus 4 ~~~~~~n~~~~~~~~~~~~~~-~p-------~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c 75 (341)
+-|+.+|++|.+.......++ .| .++|-|++|+ .+-|.||+....
T Consensus 1451 VYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mvp----------------- 1503 (2376)
T KOG1202|consen 1451 VYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMVP----------------- 1503 (2376)
T ss_pred EEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEeee-----------------
Confidence 457889999976644444332 23 5899999998 445999986631
Q ss_pred ccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC
Q 019414 76 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 155 (341)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 155 (341)
.-++++-+.++.++++.+|.+.++++|++.|+.++|+||||..+.+.+
T Consensus 1504 --------------------------------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mk 1551 (2376)
T KOG1202|consen 1504 --------------------------------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMK 1551 (2376)
T ss_pred --------------------------------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhcccc
Confidence 127899999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC----ceecCCCCCChhHHHHHHHHhcC-CccE
Q 019414 156 RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTNG-GVDR 229 (341)
Q Consensus 156 ~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~i~~~~~~-~~d~ 229 (341)
+|++|||++ +|++|++||.+|.+.|. .|+.+..++||++++.+.-. ..+-|.++.+ |..-++..|.+ |+|+
T Consensus 1552 kGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdts--FEq~vl~~T~GrGVdl 1628 (2376)
T KOG1202|consen 1552 KGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTS--FEQHVLWHTKGRGVDL 1628 (2376)
T ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccccc--HHHHHHHHhcCCCeee
Confidence 999999995 59999999999999999 99999999999999876433 3455555555 99999999999 9999
Q ss_pred EEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC--CCCHHHHHHHHHCCCC--
Q 019414 230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQL-- 305 (341)
Q Consensus 230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~i-- 305 (341)
|++.... +-++.+++||+-+ |+|..+|--.-..+.++....+.+|.+++|..+.+... .+++.++..++++|.-
T Consensus 1629 VLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksG 1706 (2376)
T KOG1202|consen 1629 VLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSG 1706 (2376)
T ss_pred ehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccC
Confidence 9999854 8899999999998 99999995433333445556688999999987654432 2467778888877622
Q ss_pred CCCCceeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414 306 ELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM 339 (341)
Q Consensus 306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~ 339 (341)
...|+.+++|+-.++++||++|.+++++ |+|+.+
T Consensus 1707 vV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1707 VVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred ceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 3566678999999999999999999985 999875
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=6.9e-24 Score=181.11 Aligned_cols=278 Identities=18% Similarity=0.207 Sum_probs=213.9
Q ss_pred CccccccCCcCcceeeeccCCCCC--CCcccc----ccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414 1 MLSQKHNSFNPRNFVFGFQGQTPL--FPRIFG----HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 74 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~~~~~~--~p~i~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~ 74 (341)
|||+-+-+..|-++.++....+.+ .|+.|| ..++|+|++. +-+++++||.|....
T Consensus 41 lvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~----------------- 101 (343)
T KOG1196|consen 41 LVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV----------------- 101 (343)
T ss_pred EeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec-----------------
Confidence 567777788888777654444332 133344 3789999995 567899999999763
Q ss_pred CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCce--EECCC--CCC--chhhhhccccchhhhhhh
Q 019414 75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV--AKINP--LAP--LDKVCILSCGVSTGLGAT 148 (341)
Q Consensus 75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~--~~lp~--~~~--~~~aa~l~~~~~ta~~~l 148 (341)
+|.||..+++... +++|. +++ +.. ..+..+..|||..+
T Consensus 102 -----------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl-g~lGm~glTAy~Gf 145 (343)
T KOG1196|consen 102 -----------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL-GLLGMPGLTAYAGF 145 (343)
T ss_pred -----------------------------------cceEEEEecCcchhcccCCCCCccCHhhhh-hccCCchhHHHHHH
Confidence 7899999887544 34433 232 222 34566789999999
Q ss_pred hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCC-ChhHHHHHHHHhcC
Q 019414 149 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH-DRPIQEVIAEMTNG 225 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~-~~~~~~~i~~~~~~ 225 (341)
.+...+++|++|+|-|| |++|+++.|+||.+|. .|+++..++||.++++. +|.+..+||.++ + +.++++...++
T Consensus 146 ~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~--~~~aL~r~~P~ 222 (343)
T KOG1196|consen 146 YEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESD--LSAALKRCFPE 222 (343)
T ss_pred HHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCccC--HHHHHHHhCCC
Confidence 99999999999999986 9999999999999999 99999999999998876 699999999876 5 88889888888
Q ss_pred CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC---Cccccc--ccceeeecceEEEeeecCCCCC--CCHHHHHH
Q 019414 226 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK---DAVFMT--KPINVLNERTLKGTFFGNYKPR--TDLPSVVD 298 (341)
Q Consensus 226 ~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~---~~~~~~--~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 298 (341)
++|+.||.+|+ ..++..+..++.. |+++.+|+.+. +.+..+ ....+.|++++.|+....+.+. ..++.+.+
T Consensus 223 GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~ 300 (343)
T KOG1196|consen 223 GIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLP 300 (343)
T ss_pred cceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHH
Confidence 99999999998 7889999999997 99999997542 111111 1233568888888766554321 35678889
Q ss_pred HHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414 299 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 340 (341)
Q Consensus 299 ~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~ 340 (341)
++++|+|....-+ .-.|+..++||.-|.+|+. +|.++.+.
T Consensus 301 ~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 301 YIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred HHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 9999999765322 3359999999999999987 48888765
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.85 E-value=3.4e-22 Score=153.02 Aligned_cols=103 Identities=30% Similarity=0.523 Sum_probs=86.6
Q ss_pred CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414 1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78 (341)
Q Consensus 1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~ 78 (341)
|||++++|+|+.|+..... ....++|.++|||++|+|+++|+++++|++||||++.+...|+.|++|+.+++++|+..
T Consensus 5 lVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~ 84 (109)
T PF08240_consen 5 LVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNP 84 (109)
T ss_dssp EEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTB
T ss_pred EEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCC
Confidence 6899999999999665444 34557899999999999999999999999999999999999999999999999999876
Q ss_pred cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEEC
Q 019414 79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 125 (341)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~l 125 (341)
.... ...+|+||||+.+|+++++++
T Consensus 85 ~~~g----------------------~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 85 EVLG----------------------LGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp EETT----------------------TSSTCSSBSEEEEEGGGEEEE
T ss_pred CEeE----------------------cCCCCcccCeEEEehHHEEEC
Confidence 6542 223479999999999999975
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=1.7e-17 Score=131.05 Aligned_cols=127 Identities=32% Similarity=0.534 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHH
Q 019414 167 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 245 (341)
Q Consensus 167 ~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~ 245 (341)
++|++++|+||..|+ +|++++++++|+++++++|++.++++++.+ +.+.+++.+++ ++|+||||+|+++.++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 999999999999999999999999998887 99999999998 99999999998899999999
Q ss_pred HhcCCCcEEEEEccCC-CCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHH
Q 019414 246 CVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 301 (341)
Q Consensus 246 ~l~~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 301 (341)
+++++ |+++.+|... ....++. ...+.+++++.|+..+.. +++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYGGDPISFNL-MNLMFKEITIRGSWGGSP---EDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTSTSEEEEEH-HHHHHTTEEEEEESSGGH---HHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccCCCCCCCCH-HHHHhCCcEEEEEccCCH---HHHHHHHHHhc
Confidence 99998 9999999887 2222222 334679999999987664 67888888875
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.45 E-value=2e-12 Score=119.86 Aligned_cols=176 Identities=21% Similarity=0.206 Sum_probs=133.5
Q ss_pred hhhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh
Q 019414 145 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 145 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~ 223 (341)
+.++.+..+ .-+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+. ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence 344444444 3689999999999999999999999999 899999999999999999985331 22222
Q ss_pred cCCccEEEeccCChHHHHHH-HHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHH--HHHHHH
Q 019414 224 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP--SVVDMY 300 (341)
Q Consensus 224 ~~~~d~vld~~g~~~~~~~~-~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~ 300 (341)
.++|+||+|+|.+..+... ++.++++ ++++.+|.. +..++... ...+++++.++..... ...++ +.+.++
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~-L~~~el~i~g~~~~~~--~~~~~~g~aI~LL 328 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKG-LKENAVEVVNIKPQVD--RYELPDGRRIILL 328 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHH-HHhhccEEEEccCCcc--eEEcCCcchhhhh
Confidence 2589999999998888876 9999997 999999954 33344322 2446777777654322 11345 689999
Q ss_pred HCCCC-CCCCceeee-----ecCC-cHHHHHHHHhcCCc--ceEEEecC
Q 019414 301 MNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME 340 (341)
Q Consensus 301 ~~~~i-~~~~~~~~~-----~~~~-~i~ea~~~~~~~~~--~k~vl~~~ 340 (341)
.+|++ .+...+++. ++|+ |+.+++..+.+++. .|+++.+.
T Consensus 329 a~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 329 AEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 99998 888888888 9999 99999999987764 47777654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.36 E-value=2e-11 Score=116.03 Aligned_cols=154 Identities=18% Similarity=0.157 Sum_probs=112.1
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCC-----------hhHHHHHHH
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIAE 221 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~-----------~~~~~~i~~ 221 (341)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 89999999999999999999854 5553321 123333333
Q ss_pred H-hc--CCccEEEeccCCh-----HH-HHHHHHHhcCCCcEEEEEccC-CCCcccccc-cceee-ecceEEEeeecCCCC
Q 019414 222 M-TN--GGVDRSVECTGNI-----DN-MISAFECVHDGWGVAVLVGVP-SKDAVFMTK-PINVL-NERTLKGTFFGNYKP 289 (341)
Q Consensus 222 ~-~~--~~~d~vld~~g~~-----~~-~~~~~~~l~~~~g~~v~~g~~-~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~ 289 (341)
. .+ +++|++|+|++.+ .. .++.++.++++ |++++++.. ..+...... ...+. +++++.|.....
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence 3 33 3799999999863 35 49999999998 999999974 332122221 22344 799998876322
Q ss_pred CCCHHHHHHHHHCCCCCCCCcee
Q 019414 290 RTDLPSVVDMYMNKQLELEKFIT 312 (341)
Q Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~~ 312 (341)
.+...+..+++.++.+.+.++++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23344688999998877665554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.13 E-value=6.5e-12 Score=98.63 Aligned_cols=120 Identities=19% Similarity=0.337 Sum_probs=75.3
Q ss_pred cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC--ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecc
Q 019414 200 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER 277 (341)
Q Consensus 200 ~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g--~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 277 (341)
||+++++|++..+ + ...+++|+|||++| ....+..++++| ++ |+++.++. . ...... ..+..
T Consensus 1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~---~-~~~~~~--~~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG---D-LPSFAR--RLKGR 64 (127)
T ss_dssp CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S---H-HHHHHH--HHHCH
T ss_pred CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC---c-ccchhh--hhccc
Confidence 6899999998554 4 22458999999999 644557777888 97 99999983 0 000100 01112
Q ss_pred eEEEeeecCCC----CCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414 278 TLKGTFFGNYK----PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 337 (341)
Q Consensus 278 ~~~g~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl 337 (341)
.+....+.... ..+.++++++++++|++.+. +.++|||+++++|++.+++++. +|+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 22222222100 11359999999999987654 7789999999999999999886 58886
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.68 E-value=1.2e-07 Score=84.45 Aligned_cols=167 Identities=17% Similarity=0.258 Sum_probs=103.1
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcC
Q 019414 151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
.+.+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++. +.+.+- ....+ +.+ + .+.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence 35788999999999877 88888888887753 799999999998888763 332221 11111 111 1 12234
Q ss_pred CccEEEecc------CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHH
Q 019414 226 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 299 (341)
Q Consensus 226 ~~d~vld~~------g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 299 (341)
.||+|+... .....++++++.|+|+ |++++.+...... .+ ..+.+...+.+...... ...+++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~-~~---~~~~~~~~~~~~~~~~~---~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE-LP---EEIRNDAELYAGCVAGA---LQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC-CC---HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence 799998432 2245799999999998 9999987543221 11 11222222222111221 345667777
Q ss_pred HHCCCC-CCCCceeeeecCCcHHHHHHHH--hcCC
Q 019414 300 YMNKQL-ELEKFITHRIPFSEINKAFEYM--VKGE 331 (341)
Q Consensus 300 ~~~~~i-~~~~~~~~~~~~~~i~ea~~~~--~~~~ 331 (341)
+++.-+ .........++++++.++++.+ .+++
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 776333 2332344568899999999988 5544
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.46 E-value=2e-06 Score=81.94 Aligned_cols=105 Identities=21% Similarity=0.242 Sum_probs=80.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCC-----------ChhHHHHHHHH
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAEM 222 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~-----------~~~~~~~i~~~ 222 (341)
.++++++|+|+|.+|++++++++.+|+ .|++++.+.++++.++++|++.+ ++..+. +.++.+...+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999999763 332110 12244444444
Q ss_pred hc---CCccEEEecc---CChH---HHHHHHHHhcCCCcEEEEEccCC
Q 019414 223 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 223 ~~---~~~d~vld~~---g~~~---~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
.. .++|++|+|+ |.+. ..++.++.++++ +.++++....
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~ 287 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQ 287 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCC
Confidence 33 3799999998 5433 466779999998 9999997643
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.41 E-value=1.6e-08 Score=95.34 Aligned_cols=160 Identities=18% Similarity=0.199 Sum_probs=108.1
Q ss_pred cccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccC
Q 019414 28 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG 107 (341)
Q Consensus 28 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 107 (341)
--|.|+++.+.+|++++.+ +|++.+.+ ||.|.+| ++.|...... | ...
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~------------g----------~~l 136 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV------------G----------KVL 136 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc------------h----------HHH
Confidence 3789999999999998765 88888888 9999999 6666655442 1 112
Q ss_pred CCcccceEEeecCceEE---C-CCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Q 019414 108 TSTFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 183 (341)
Q Consensus 108 ~g~~ae~~~v~~~~~~~---l-p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~ 183 (341)
++.|++++.++. .+.. + +..+|...+| .....+.....++.+|+|+|+|.+|.++++.++..|+..
T Consensus 137 ~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 137 ERLFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred HHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 358999998876 3332 2 2223322211 111123334467899999999999999999999999768
Q ss_pred EEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 184 IIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 184 vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
|+++.++.++.+ +++++|.. .+... ++.+.+ .++|+||.|++++..
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~~----~l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKFE----DLEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeHH----HHHHHH-----hhCCEEEECCCCCCc
Confidence 999999988754 66777764 22221 122222 258999999987543
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.25 E-value=1.8e-05 Score=74.01 Aligned_cols=103 Identities=26% Similarity=0.270 Sum_probs=78.0
Q ss_pred hhhhhhhhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH
Q 019414 144 GLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 144 a~~~l~~~~~~~-~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~ 222 (341)
.|.++.+...+. .|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 344444443544 89999999999999999999999999 899999998887666666654 221 22222
Q ss_pred hcCCccEEEeccCChHHHH-HHHHHhcCCCcEEEEEccCC
Q 019414 223 TNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 223 ~~~~~d~vld~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~ 261 (341)
.++|++|+++|....+. ..+..++++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 25899999999877776 678888887 8888888654
No 136
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.19 E-value=3.4e-05 Score=67.82 Aligned_cols=133 Identities=18% Similarity=0.217 Sum_probs=82.9
Q ss_pred cccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Q 019414 110 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188 (341)
Q Consensus 110 ~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~ 188 (341)
+|.+|.. +...++.+++++++..+. .+ .|.. ++.... .+.++++||-+|+|. |.+++.+++ .|..+|++++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~---tt~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HP---TTRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CH---HHHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 5556644 667788999888776543 11 1111 111111 256889999999987 877776554 6776799999
Q ss_pred CChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC--CccEEEeccCCh---HHHHHHHHHhcCCCcEEEEEccCC
Q 019414 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 189 ~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~--~~d~vld~~g~~---~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
.++...+.+++.-...-+. +. + ....+ .||+|+-..... ..++++.+.|+++ |.+++.+...
T Consensus 150 is~~~l~~A~~n~~~~~~~--~~-------~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 150 IDPQAVEAARENAELNGVE--LN-------V-YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred CCHHHHHHHHHHHHHcCCC--ce-------E-EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 9999888776531111010 00 0 00111 589998654332 3567888999998 9999987543
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.19 E-value=4.5e-05 Score=68.66 Aligned_cols=97 Identities=19% Similarity=0.282 Sum_probs=75.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.+.+++|+|.|.+|+++++.++.+|+ +|++++++.++.+.++++|+..+ .. +.+.+.. .++|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999988888888887532 11 1112221 25999999987
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCc
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDA 264 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~ 264 (341)
.....+..++.++++ +.++.++......
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggt 247 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGT 247 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCc
Confidence 643456677888997 9999998765543
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.11 E-value=4.6e-05 Score=70.94 Aligned_cols=101 Identities=29% Similarity=0.314 Sum_probs=76.8
Q ss_pred hhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414 146 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 146 ~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
.++.+..+ ...|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...++..|+. +++ ..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal----- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA----- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----
Confidence 33444433 3689999999999999999999999999 899998888887777767763 221 22222
Q ss_pred CCccEEEeccCChHHHHH-HHHHhcCCCcEEEEEccCC
Q 019414 225 GGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 225 ~~~d~vld~~g~~~~~~~-~~~~l~~~~g~~v~~g~~~ 261 (341)
.+.|++|++.|.+..+.. .+..++++ +.++..|-..
T Consensus 249 ~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 247999999999877764 88888887 8988887543
No 139
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.06 E-value=8.8e-08 Score=90.60 Aligned_cols=161 Identities=21% Similarity=0.177 Sum_probs=98.8
Q ss_pred cccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccC
Q 019414 28 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG 107 (341)
Q Consensus 28 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 107 (341)
--|||+++.+.+|++++.+ +|++.+.. ||.|.. .++.|...... +.. .
T Consensus 91 ~~g~ea~~hl~~V~~GldS-----~V~GE~qI-lgQvk~----a~~~a~~~g~~------------g~~----------l 138 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDS-----MVLGEPQI-LGQVKD----AYALAQEAGTV------------GTI----------L 138 (423)
T ss_pred cCCHHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHH----HHHHHHHcCCc------------hHH----------H
Confidence 3799999999999998876 55555555 555542 22333332221 111 1
Q ss_pred CCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEE
Q 019414 108 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK---PERGSSVAVFGLGAVGLAAAEGARIAGASRI 184 (341)
Q Consensus 108 ~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~G~g~~G~~a~~la~~~g~~~v 184 (341)
.+.|++.+.++ +.+..+.+ ....+.+.++.++..... -.++.+|+|+|+|.+|.++++.++..|+..|
T Consensus 139 ~~lf~~a~~~~--------k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 139 NRLFQKAFSVA--------KRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred HHHHHHHHHHH--------hhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 13566555444 32222221 222345566666432222 2578999999999999999999999998789
Q ss_pred EEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 185 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 185 v~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
+++.++.++.+ +++++|.+ +++..+ +.+.+ .++|+||.|++++..
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~~~----~~~~l-----~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPLDE----LPEAL-----AEADIVISSTGAPHP 255 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeHHH----HHHHh-----ccCCEEEECCCCCCc
Confidence 99999988855 67778753 322211 21111 258999999987543
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.01 E-value=1.4e-05 Score=72.47 Aligned_cols=109 Identities=24% Similarity=0.221 Sum_probs=76.9
Q ss_pred CceEECCCCCCchhhhhccccchhhhhhhhhhcCC---CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-H
Q 019414 120 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP---ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-E 195 (341)
Q Consensus 120 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~-~ 195 (341)
...+++|+.+..++++.. .+.+.++.++...... -++.+|+|+|+|.+|..+++.++..|...|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 345677888887776554 4667777774322221 4789999999999999999999988877899999998764 6
Q ss_pred HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 196 ~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
+++++|+. +++.. ++.+.+ ...|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence 77888873 33221 122222 248999999998655
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.00 E-value=8.2e-05 Score=70.02 Aligned_cols=101 Identities=21% Similarity=0.284 Sum_probs=77.7
Q ss_pred hhhhhhhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh
Q 019414 145 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 145 ~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~ 223 (341)
+.++.+..++ -.|++++|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|...+ + ..+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv------~--leEal---- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL------T--LEDVV---- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec------c--HHHHH----
Confidence 3344444443 579999999999999999999999999 89999988887766766776522 1 32222
Q ss_pred cCCccEEEeccCChHHH-HHHHHHhcCCCcEEEEEccC
Q 019414 224 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 224 ~~~~d~vld~~g~~~~~-~~~~~~l~~~~g~~v~~g~~ 260 (341)
...|+++.+.|....+ ...++.++++ +.++.+|..
T Consensus 308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 2479999999986654 7899999997 999999864
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.97 E-value=3.4e-06 Score=83.04 Aligned_cols=99 Identities=23% Similarity=0.272 Sum_probs=67.1
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHHcCCceecCCCC-
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE- 210 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~---------------------~~~~~~~~~~g~~~vv~~~~- 210 (341)
.+++|++|+|+|+|+.|+++++.++..|+ .|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888743 35567788899987776543
Q ss_pred CChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414 211 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 211 ~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.+... +.+ ..++|+||+++|........+...... |.+..++
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~-gv~~~~~ 253 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQLGKRLPIPGEDAA-GVLDAVD 253 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCCCCcCCCCCCccC-CcEEHHH
Confidence 22111 111 236999999999754433333333333 4444443
No 143
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=3.1e-05 Score=64.84 Aligned_cols=101 Identities=20% Similarity=0.298 Sum_probs=76.4
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHHcCCcee-cCCCCCChhHHHHHHHH
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFGVTDF-VNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~----~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~ 222 (341)
+.+...+++|++||=+|+|. |..++-+|+..+ +|+++++.++ .++.++.+|...| +...+.. .-+
T Consensus 64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~-------~G~ 133 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS-------KGW 133 (209)
T ss_pred HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc-------cCC
Confidence 35778999999999999874 899999999888 8999999887 4455677888543 2232322 122
Q ss_pred hcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 223 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 223 ~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
... +||.|+-+.+.++..+.+++.|+++ |+++.--.
T Consensus 134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 333 8999998887777778999999998 88876643
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.80 E-value=0.00065 Score=63.17 Aligned_cols=97 Identities=23% Similarity=0.190 Sum_probs=67.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
++.+++|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.+ ++........+. +.+.+.. ..+|++|+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~-----~~l~~~l-~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSNA-----YEIEDAV-KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCCH-----HHHHHHH-ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888776654 554322222211 1122222 2589999997
Q ss_pred C---C--hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414 235 G---N--ID-NMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 235 g---~--~~-~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
+ . +. .....++.++++ +.++.++..
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d 269 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAID 269 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecC
Confidence 3 2 11 136777888997 999998754
No 145
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.69 E-value=0.0007 Score=60.65 Aligned_cols=97 Identities=20% Similarity=0.299 Sum_probs=70.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ . +. .+.+.. ...|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence 57899999999999999999999998 89999999888777777765422 1 11 122221 25899999986
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCc
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDA 264 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~ 264 (341)
..-.-...++.++++ ..++.++......
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~t 246 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGT 246 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCC
Confidence 532234566778886 8888888655443
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.66 E-value=0.00057 Score=64.60 Aligned_cols=92 Identities=24% Similarity=0.278 Sum_probs=71.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.-.|.+++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ + +.+.+ ...|+|+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~------~--leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV------T--LEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec------c--HHHHH-----hcCCEEEEC
Confidence 3478999999999999999999999999 89999888777655555565421 1 33222 248999999
Q ss_pred cCChHHHH-HHHHHhcCCCcEEEEEccC
Q 019414 234 TGNIDNMI-SAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 234 ~g~~~~~~-~~~~~l~~~~g~~v~~g~~ 260 (341)
.|....+. ..+..++++ +.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 98877765 889999997 999998865
No 147
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.61 E-value=0.00041 Score=62.33 Aligned_cols=98 Identities=21% Similarity=0.275 Sum_probs=64.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~~d~ 229 (341)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +....+.....+ ......++||+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~------~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY------LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc------cccccCCCceE
Confidence 45789999999877 777776665 5777999999999887777652 221100000000 11122347999
Q ss_pred EEeccCCh---HHHHHHHHHhcCCCcEEEEEccC
Q 019414 230 SVECTGNI---DNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 230 vld~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
|+...... ..+..+.+.|+|+ |.+++.|..
T Consensus 229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 98644322 3567788999998 999888754
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.58 E-value=0.00063 Score=68.63 Aligned_cols=114 Identities=23% Similarity=0.307 Sum_probs=71.8
Q ss_pred CcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Q 019414 109 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 187 (341)
Q Consensus 109 g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v 187 (341)
-++++|..+++..++.+ +..+.+++..-. .......+|.++||+|+ |++|++.++.+...|+ .|+.+
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~ 452 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA 452 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence 35567887887777766 555556543110 00122336789999986 9999999999999999 89999
Q ss_pred cCChhhHHHHH-HcCC-----ceecCCCCCChhHHHHHHHHh--cCCccEEEeccC
Q 019414 188 DRSSKRFEEAK-KFGV-----TDFVNTSEHDRPIQEVIAEMT--NGGVDRSVECTG 235 (341)
Q Consensus 188 ~~~~~~~~~~~-~~g~-----~~vv~~~~~~~~~~~~i~~~~--~~~~d~vld~~g 235 (341)
+++.++.+.+. +++. ....|..+.+ .+.+.+.+.. .+++|++|++.|
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCC
Confidence 99888766543 3433 1123443322 1222232222 237999999988
No 149
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.58 E-value=0.00087 Score=55.06 Aligned_cols=104 Identities=22% Similarity=0.356 Sum_probs=72.2
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHhc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
+.+.+++||+.++=+|+|. |..++++++.....+|+++++++++.+.. ++||.+.+...... ..+.+....
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~- 101 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP- 101 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC-
Confidence 3567899999888788753 77788888655556999999999997765 45887754322221 222222211
Q ss_pred CCccEEEeccCC--hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 225 GGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 225 ~~~d~vld~~g~--~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.+|.+|---|. .+.++.+|..|+++ |++|....
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 59999865432 35788999999998 99988754
No 150
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.56 E-value=0.0044 Score=55.54 Aligned_cols=139 Identities=13% Similarity=0.131 Sum_probs=88.0
Q ss_pred cccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc---CCCCCCEEEEECC-CHHHHHHHHHHH-HcCCCEE
Q 019414 110 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI 184 (341)
Q Consensus 110 ~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~-g~~G~~a~~la~-~~g~~~v 184 (341)
.|-+|.++..+..+.- .-...++..-| -+.|.|.. .+.. +.-..+.|+|.++ +-.++..+..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 5667777776654421 11112222222 23444432 2221 2233456777776 788888888887 5555599
Q ss_pred EEEcCChhhHHHHHHcCC-ceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 185 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 185 v~v~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
|.+ .|+.+.+..+.+|. +.|+.|++ +..+....--+++|..|+.+....+-+.+...--..+.+|...
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 999 57777889999997 67776654 3344334567889999999888888888887534567777543
No 151
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.44 E-value=0.0034 Score=58.66 Aligned_cols=113 Identities=22% Similarity=0.234 Sum_probs=76.9
Q ss_pred ccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHH
Q 019414 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ 216 (341)
Q Consensus 137 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 216 (341)
+..+....+..+.+..++++|++||-+|+| .|..+..+++..|. +|++++.+++..+.+++......+.....+ +.
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~ 223 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR 223 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh
Confidence 333444555556677889999999999985 46777888888888 999999999999988874322111111111 21
Q ss_pred HHHHHHhcCCccEEEe-----ccCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 217 EVIAEMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 217 ~~i~~~~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.. .+.||.|+. .+|. ...++.+.+.|+|+ |.+++...
T Consensus 224 ----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 224 ----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred ----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 11 347998864 2332 34678889999998 99987654
No 152
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.38 E-value=0.00071 Score=53.48 Aligned_cols=73 Identities=26% Similarity=0.386 Sum_probs=52.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc--eecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
++.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+ ++++.. ..+.+++ +.+.+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 578999999999999999999999998899999998886654 455332 2333322 22111 25999999
Q ss_pred ccCCh
Q 019414 233 CTGNI 237 (341)
Q Consensus 233 ~~g~~ 237 (341)
|++.+
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98764
No 153
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.34 E-value=0.002 Score=58.54 Aligned_cols=102 Identities=23% Similarity=0.263 Sum_probs=71.7
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHh
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~ 223 (341)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+... ..+ ..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD--~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGD--GYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCC--hhhcccc--
Confidence 455678899999999997 59999999998763 37999999998766554 4666543222 112 2221111
Q ss_pred cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414 224 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 224 ~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
.+.+|+|+.+.+........++.|+++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999998887766677888999998 987763
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.31 E-value=0.004 Score=52.62 Aligned_cols=103 Identities=22% Similarity=0.418 Sum_probs=70.3
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcC-CceecCCCCCChhHHHHHHHH
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFG-VTDFVNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~----~~g-~~~vv~~~~~~~~~~~~i~~~ 222 (341)
....++.++++||.+|+|. |..++.+++..+. .+|++++.+++..+.++ .++ .+.+.... .+ ..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d--~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GE--APEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ec--hhhhHhh-
Confidence 3456888999999999987 8889999987642 48999999998887654 355 23222111 11 2222222
Q ss_pred hcCCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEE
Q 019414 223 TNGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 223 ~~~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~ 257 (341)
..+.+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 108 ~~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 108 INEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred cCCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 22479999975442 34678888999998 998864
No 155
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.21 E-value=0.0023 Score=54.87 Aligned_cols=78 Identities=21% Similarity=0.363 Sum_probs=58.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC----ceecCCCCCChhHHHHHHHHhcC--Ccc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV----TDFVNTSEHDRPIQEVIAEMTNG--GVD 228 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~----~~vv~~~~~~~~~~~~i~~~~~~--~~d 228 (341)
+..++|+|+ +++|.+.++.....|+ +|+.+.|++++++.+ .+++. ...+|-.+.+ .....+..+... .+|
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRID 83 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCccc
Confidence 467889997 8999999999999999 999999999998765 45772 2234544432 245555555555 699
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
++++..|-
T Consensus 84 iLvNNAGl 91 (246)
T COG4221 84 ILVNNAGL 91 (246)
T ss_pred EEEecCCC
Confidence 99998773
No 156
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.10 E-value=0.0033 Score=52.25 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=56.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC---ceecCCCCCC--hhHHHHHHHHhcCCccEE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHD--RPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~---~~vv~~~~~~--~~~~~~i~~~~~~~~d~v 230 (341)
|.+|||+|+ +++|++.++-...+|- +||.+.|++++++.++..-. +.|.|..+.+ .++.+.+++..+ ..+++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 678999975 8999999988889998 99999999999999887544 3455554433 224444444333 47888
Q ss_pred EeccC
Q 019414 231 VECTG 235 (341)
Q Consensus 231 ld~~g 235 (341)
+++.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 88877
No 157
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.09 E-value=0.01 Score=49.73 Aligned_cols=101 Identities=19% Similarity=0.175 Sum_probs=62.9
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcC-Ccc
Q 019414 151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GVD 228 (341)
Q Consensus 151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~-~~d 228 (341)
...+++|++||.+|+|.-++......+..+..+|++++.++++ ...++..+ .|..+. ...+.+++..+. ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCcc
Confidence 3457899999999987645433333333344489999998864 11233322 133222 244455555555 899
Q ss_pred EEEe-cc----CC------------hHHHHHHHHHhcCCCcEEEEEc
Q 019414 229 RSVE-CT----GN------------IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 229 ~vld-~~----g~------------~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+|+. .. |. ...+..+.+.|+++ |+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 9994 32 21 34677889999998 9998854
No 158
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.04 E-value=0.00092 Score=56.86 Aligned_cols=101 Identities=22% Similarity=0.311 Sum_probs=66.1
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHH----HHHcCCcee-cCCCCCChhHHHHHHH
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAE 221 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~----~~~~g~~~v-v~~~~~~~~~~~~i~~ 221 (341)
+.+...++||++||-+|+|. |..++.+++..|.. .|++++..++-.+. +++++.+.+ +...+.. ..
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~-------~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGS-------EG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GG-------GT
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchh-------hc
Confidence 45677899999999999764 78888888887743 79999988865443 445666543 2121111 01
Q ss_pred Hhc-CCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414 222 MTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 222 ~~~-~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
+.. ++||.|+-+.+.++.....++.|+++ |+++.-
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 112 37999998877766778899999998 988874
No 159
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.01 E-value=0.0092 Score=49.95 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=59.7
Q ss_pred CCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCc-eecCCCCCC--hhHHHHHHHHhcCCccEE
Q 019414 157 GSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHD--RPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 157 g~~vlI~G~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vv~~~~~~--~~~~~~i~~~~~~~~d~v 230 (341)
...|||+|+ |++|.+.+.-....|+ .|+++.++-+++.-+. ++|.. .-+|..+++ ..+...+++.++|+.|+.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 356899974 9999999888889999 9999999999988776 77763 234443332 236667777777899999
Q ss_pred EeccCC
Q 019414 231 VECTGN 236 (341)
Q Consensus 231 ld~~g~ 236 (341)
++..|.
T Consensus 86 ~NNAG~ 91 (289)
T KOG1209|consen 86 YNNAGQ 91 (289)
T ss_pred EcCCCC
Confidence 986663
No 160
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.01 E-value=0.016 Score=50.13 Aligned_cols=102 Identities=23% Similarity=0.359 Sum_probs=64.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCcee--cCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDF--VNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~v--v~~~~~~~~~~~~i~~~~~--~~ 226 (341)
.+.+|+|+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +++ +.... .|..+.+ .+.+.+.+... ++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTE-SARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence 3678999987 9999999999999999 888888988876554 222 22122 2333322 12222222221 36
Q ss_pred ccEEEeccCChH-----------------------HHHHHHHHhcCCCcEEEEEccC
Q 019414 227 VDRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 227 ~d~vld~~g~~~-----------------------~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
+|.++.+.+... .++.+++++.++ |+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 899998876311 134455566666 888888754
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0089 Score=53.25 Aligned_cols=79 Identities=16% Similarity=0.291 Sum_probs=55.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCCh--hHHHHHHHHhcCCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDR--PIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~--~~~~~i~~~~~~~~d~vl 231 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+.+...+ .|..+.+. .+.+.+.+...+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 3568999987 9999999998888899 89999999888877776665433 34443320 122223233335799999
Q ss_pred eccC
Q 019414 232 ECTG 235 (341)
Q Consensus 232 d~~g 235 (341)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 162
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.90 E-value=0.0034 Score=47.49 Aligned_cols=94 Identities=22% Similarity=0.245 Sum_probs=62.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcC----C-ceecCCCCCChhHHHHHHHHhcCCccE
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFG----V-TDFVNTSEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g----~-~~vv~~~~~~~~~~~~i~~~~~~~~d~ 229 (341)
|+.+||-+|+|. |..++.+++. .+. +|++++.+++..+.+++.- . +++ .....+ + .......++||+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~d--~--~~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRI-TFVQGD--A--EFDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEESC--C--HGGTTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEECc--c--ccCcccCCCCCE
Confidence 688999999865 7888888885 566 9999999999988877532 2 222 111112 2 011112237999
Q ss_pred EEecc-CC---h------HHHHHHHHHhcCCCcEEEEE
Q 019414 230 SVECT-GN---I------DNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 230 vld~~-g~---~------~~~~~~~~~l~~~~g~~v~~ 257 (341)
|+... .. . ..++.+.+.|+|+ |+++..
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 98765 21 1 2378899999997 988764
No 163
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.88 E-value=0.0036 Score=55.62 Aligned_cols=103 Identities=24% Similarity=0.271 Sum_probs=62.6
Q ss_pred hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414 147 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 147 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~ 222 (341)
.+.++++++||++||-+|+| -|..++.+|+..|+ +|++++.+++..+.+++ .|....+.....+ + +++
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~ 124 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDL 124 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG-
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----ccc
Confidence 35678899999999999987 46778888998899 99999999999887654 5543211111111 1 122
Q ss_pred hcCCccEEEe-----ccCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 223 TNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 223 ~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
. ..||.|+- .+|. +..++.+.+.|+|+ |++++-..
T Consensus 125 ~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 125 P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 1 26898764 3432 24578889999998 99876543
No 164
>PRK06182 short chain dehydrogenase; Validated
Probab=96.85 E-value=0.008 Score=53.35 Aligned_cols=78 Identities=21% Similarity=0.363 Sum_probs=54.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEEe
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE 232 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vld 232 (341)
+.+++|+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.++.. ..|..+.+ .+.+.+.+... +++|++|+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEE
Confidence 568999987 9999999999888999 8999989888876665555433 23443322 13333333322 37999999
Q ss_pred ccCC
Q 019414 233 CTGN 236 (341)
Q Consensus 233 ~~g~ 236 (341)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 8873
No 165
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.84 E-value=0.012 Score=54.45 Aligned_cols=97 Identities=18% Similarity=0.232 Sum_probs=65.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC---C-ceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---V-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g---~-~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.+|||+|+|.+|+.+++.+.+.+-.+|+.++++.++.+.+.... . ...+|..+.+ ++.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-----al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-----ALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-----HHHHHHh-cCCEEEEe
Confidence 46899999999999999988888459999999999888877654 2 2345554432 2222222 35999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
.+..-....+-.|+..+ =.++.+....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 97754544343455554 4556665443
No 166
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.83 E-value=0.05 Score=48.14 Aligned_cols=107 Identities=23% Similarity=0.306 Sum_probs=77.2
Q ss_pred hhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-ee----cCCCCCC
Q 019414 142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF----VNTSEHD 212 (341)
Q Consensus 142 ~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v----v~~~~~~ 212 (341)
..++..+.++.+++||++||=+|+|- |.+++-.|+..|+ +|++++-|++..+.+++ .|.. .+ .|+++
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd-- 133 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD-- 133 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc--
Confidence 44455567889999999999999875 7778888999999 99999999999887665 4544 11 12222
Q ss_pred hhHHHHHHHHhcCCccEEE-----eccCC---hHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414 213 RPIQEVIAEMTNGGVDRSV-----ECTGN---IDNMISAFECVHDGWGVAVLVGVPSKD 263 (341)
Q Consensus 213 ~~~~~~i~~~~~~~~d~vl-----d~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~ 263 (341)
.. +.||.|+ +.+|. +..+..+.++|+|+ |++.+-.....+
T Consensus 134 ---------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 ---------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred ---------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 2477765 34443 34678899999998 999887765544
No 167
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.83 E-value=0.0065 Score=51.95 Aligned_cols=101 Identities=25% Similarity=0.313 Sum_probs=67.6
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCce--ecCCCCCChhHHHHHH
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIA 220 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~i~ 220 (341)
+....+++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .|... ++..+... ..
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~-----~~- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL-----GY- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-----CC-
Confidence 34567889999999998764 6677778877653 399999999988776654 44432 12111100 00
Q ss_pred HHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414 221 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 221 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
...++||+|+-........+..++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01237999875544456677889999998 998775
No 168
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.82 E-value=0.013 Score=44.87 Aligned_cols=101 Identities=20% Similarity=0.318 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCcee--cCCCCCChhHHHHHHHHh
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v--v~~~~~~~~~~~~i~~~~ 223 (341)
....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++ ++...+ +..+ ...... ..
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~~-~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD-----APEALE-DS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc-----ccccCh-hh
Confidence 445667788899999876 8888889988754599999999988777653 443322 1111 110011 11
Q ss_pred cCCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414 224 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 224 ~~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.+.+|+|+-..+. .+.++.+.+.|+++ |++++..
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 2379999865432 24688899999998 9988753
No 169
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.76 E-value=0.006 Score=50.11 Aligned_cols=97 Identities=24% Similarity=0.256 Sum_probs=64.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC-CCCC------------------ChhHHH
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH------------------DRPIQE 217 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~-~~~~------------------~~~~~~ 217 (341)
.-+|+|+|+|.+|+.|+.+++.+|+ +++..+...++.+..+..+...+.. +.+. ...+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3779999999999999999999999 8999999999988888888755432 1111 111332
Q ss_pred HHHHHhcCCccEEEecc--CC---hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414 218 VIAEMTNGGVDRSVECT--GN---ID-NMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 218 ~i~~~~~~~~d~vld~~--g~---~~-~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
.+. .+|++|-+. .+ +. ..++.++.++++ ..++.+...
T Consensus 99 ~i~-----~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-----PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-----H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-----hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 222 378888532 11 11 234566778886 888888653
No 170
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.75 E-value=0.018 Score=47.61 Aligned_cols=92 Identities=23% Similarity=0.306 Sum_probs=61.3
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccCC-
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN- 236 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~- 236 (341)
|+|+|+ |.+|...++.+...|+ +|+++.+++++.+. ..+++.+ .|.. + . +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~--d--~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLF--D--P-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTT--C--H-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeeh--h--h-hhhhhhhh-hcchhhhhhhhh
Confidence 689997 9999999999999997 99999999998776 4444433 2332 2 2 23333332 69999999974
Q ss_pred ---hHHHHHHHHHhcCC-CcEEEEEccC
Q 019414 237 ---IDNMISAFECVHDG-WGVAVLVGVP 260 (341)
Q Consensus 237 ---~~~~~~~~~~l~~~-~g~~v~~g~~ 260 (341)
.......++.+... -.+++.++..
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccccccccceeeecc
Confidence 23344555555432 1477776644
No 171
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.74 E-value=0.018 Score=49.75 Aligned_cols=103 Identities=22% Similarity=0.261 Sum_probs=73.6
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~ 223 (341)
....++.||++|+=.|.|+ |.+++-||+..|. .+|+..+..++..+.+++ +|....+.....| +.+..
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D------v~~~~ 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD------VREGI 159 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc------ccccc
Confidence 4678999999999888764 8888899998864 699999999988776553 4543322121121 12222
Q ss_pred cC-CccEEE-eccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 224 NG-GVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 224 ~~-~~d~vl-d~~g~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.+ .+|++| |---..+.++.+.+.|.++ |.++.+..
T Consensus 160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 22 688875 7665667899999999998 99988863
No 172
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=52.46 Aligned_cols=75 Identities=21% Similarity=0.388 Sum_probs=53.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhc--CCccEEEecc
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVECT 234 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d~vld~~ 234 (341)
++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+.+...+ .|..+.+ .+.+.+..... +++|++|++.
T Consensus 3 ~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEECC
Confidence 6899987 9999999999888999 89999898888777666665433 4444322 23333333322 3799999998
Q ss_pred C
Q 019414 235 G 235 (341)
Q Consensus 235 g 235 (341)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 173
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.69 E-value=0.012 Score=50.10 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=66.3
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHH
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVI 219 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i 219 (341)
+.+...++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++ .+... ++..+ ..+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCC
Confidence 34566788999999998764 777777777764 2389999999887665543 44321 22111 11111
Q ss_pred HHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414 220 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 220 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
. ..+.||.|+-+.......+.+++.|+++ |+++..
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 0 1237999986655545667888999998 998764
No 174
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.66 E-value=0.022 Score=48.55 Aligned_cols=105 Identities=20% Similarity=0.268 Sum_probs=72.3
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCC-CChhHHHHHHHHh
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSE-HDRPIQEVIAEMT 223 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~-~~~~~~~~i~~~~ 223 (341)
..++.....+||=+|++ +|..++++|..+. -.++++++.++++.+.+++ .|.+..+.... .+ ..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence 34556677888888863 4777888888775 3489999999999877654 67654221111 23 555555544
Q ss_pred cCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEEEc
Q 019414 224 NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 224 ~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.+.||.|| |+- -.++.++.++++|+++ |.++.=+
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 45899997 542 2467899999999997 8877654
No 175
>PRK12742 oxidoreductase; Provisional
Probab=96.65 E-value=0.046 Score=47.14 Aligned_cols=77 Identities=25% Similarity=0.329 Sum_probs=48.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH-HHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE-AKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~-~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+. .++++...+ .|..+.+ .+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~-~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADRD-AVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCHH-HHHHHHHH--hCCCcEEE
Confidence 3678999987 9999999999998999 6666544 4444433 344555432 3333221 13333322 13699999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 98764
No 176
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.62 E-value=0.02 Score=47.45 Aligned_cols=89 Identities=31% Similarity=0.404 Sum_probs=60.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
-.|.+|.|+|.|.+|+..+++++.+|. +|++.+++.+........+... .+ +.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhhh
Confidence 368999999999999999999999999 9999999888776455555421 11 4444433 68888776
Q ss_pred CC-hH----HHHHHHHHhcCCCcEEEEEc
Q 019414 235 GN-ID----NMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 235 g~-~~----~~~~~~~~l~~~~g~~v~~g 258 (341)
.. ++ .-...++.++++ ..++.++
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~a 127 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVA 127 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred ccccccceeeeeeeeeccccc-eEEEecc
Confidence 52 21 123567777776 6666665
No 177
>PRK08017 oxidoreductase; Provisional
Probab=96.58 E-value=0.017 Score=50.61 Aligned_cols=77 Identities=18% Similarity=0.319 Sum_probs=54.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCCh--hHHHHHHHHhcCCccEEEec
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDR--PIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~--~~~~~i~~~~~~~~d~vld~ 233 (341)
.++||+|+ |++|.+.++.+...|+ +|+++.++.++.+.+++.++..+ .|..+.+. .+.+.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 46999997 9999999999998999 88999999988888777776433 34333210 12333333333578888888
Q ss_pred cC
Q 019414 234 TG 235 (341)
Q Consensus 234 ~g 235 (341)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
No 178
>PRK04148 hypothetical protein; Provisional
Probab=96.56 E-value=0.083 Score=41.33 Aligned_cols=95 Identities=18% Similarity=0.184 Sum_probs=65.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC-CCCCChhHHHHHHHHhcCCccEEEec
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~-~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.++.+++++|.| .|...++.+...|. .|++++.+++..+.+++.+...+.+ --+++..+. +++|++...
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y--------~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY--------KNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH--------hcCCEEEEe
Confidence 456789999998 78755656667898 9999999999999999988765442 223321111 368999988
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
-..++...-+++....-+.-++..-.
T Consensus 85 rpp~el~~~~~~la~~~~~~~~i~~l 110 (134)
T PRK04148 85 RPPRDLQPFILELAKKINVPLIIKPL 110 (134)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 77766666666666655344444443
No 179
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.013 Score=53.72 Aligned_cols=79 Identities=23% Similarity=0.385 Sum_probs=52.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~ 225 (341)
++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. +++.|.+. ..|..+.+. .+.+.+.+. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence 4678999987 9999999999999999 78888898887653 33455543 234433220 122222222 24
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 180
>PRK00536 speE spermidine synthase; Provisional
Probab=96.55 E-value=0.01 Score=52.19 Aligned_cols=99 Identities=10% Similarity=-0.035 Sum_probs=66.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEE-eccC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-ECTG 235 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl-d~~g 235 (341)
..+|||+|+|- |.++-.++|.- .+|+.++-+++=.+.++++-...--..+++.-.+...+.+...+.||+|| |..-
T Consensus 73 pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs~~ 149 (262)
T PRK00536 73 LKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQEP 149 (262)
T ss_pred CCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcCCC
Confidence 47899998754 45566788875 39999999999999999843321101122221122233333335799976 7666
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
+++-.+.+.++|+++ |.++....
T Consensus 150 ~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 150 DIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred ChHHHHHHHHhcCCC-cEEEECCC
Confidence 667788999999998 99888754
No 181
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.019 Score=49.29 Aligned_cols=77 Identities=9% Similarity=0.164 Sum_probs=51.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+++++-.. .+|..+.+ .+.+....+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPA-SLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHH-HHHHHHHHhhcCCCCEEEEcC
Confidence 36899987 9999998888888899 8999998887776665543222 23333322 133333333334799999887
Q ss_pred CC
Q 019414 235 GN 236 (341)
Q Consensus 235 g~ 236 (341)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 53
No 182
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.53 E-value=0.019 Score=50.38 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=55.8
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCce---ecCCCCCChhHHHHHHH-Hhc
Q 019414 155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD---FVNTSEHDRPIQEVIAE-MTN 224 (341)
Q Consensus 155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~---vv~~~~~~~~~~~~i~~-~~~ 224 (341)
..+.++||+|+ +++|...+..+...|+ .++.+.|+++|++.+.+ + |... .+|..+.+ -.+.+.+ +..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHHh
Confidence 45678999998 9999999999999999 99999999999876543 2 2221 24544443 3333333 222
Q ss_pred C--CccEEEeccCC
Q 019414 225 G--GVDRSVECTGN 236 (341)
Q Consensus 225 ~--~~d~vld~~g~ 236 (341)
. .+|+.+++.|.
T Consensus 81 ~~~~IdvLVNNAG~ 94 (265)
T COG0300 81 RGGPIDVLVNNAGF 94 (265)
T ss_pred cCCcccEEEECCCc
Confidence 2 79999999884
No 183
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.50 E-value=0.046 Score=52.40 Aligned_cols=78 Identities=24% Similarity=0.356 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hh-HHHHHHcCCce-ecCCCCCChhHHHHHHHHh--cCCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KR-FEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~-~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~--~~~~d 228 (341)
++.++||+|+ |++|.+.++.+...|+ +|+.+++++ ++ .+..++++... .+|..+.+ ...+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence 5788999987 9999999999989999 788887643 22 22334455432 23444332 1222222221 13699
Q ss_pred EEEeccC
Q 019414 229 RSVECTG 235 (341)
Q Consensus 229 ~vld~~g 235 (341)
++|++.|
T Consensus 287 ~vi~~AG 293 (450)
T PRK08261 287 IVVHNAG 293 (450)
T ss_pred EEEECCC
Confidence 9999987
No 184
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.025 Score=49.02 Aligned_cols=77 Identities=23% Similarity=0.380 Sum_probs=51.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
++.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... ..|..+.+ ......+. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~--~v~~~~~~-~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA--AIRAALAA-AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH--HHHHHHHH-hCCCCEEEE
Confidence 4678999987 9999999999999999 7888988887765543 344432 23443321 22222221 136999999
Q ss_pred ccCC
Q 019414 233 CTGN 236 (341)
Q Consensus 233 ~~g~ 236 (341)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 185
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.47 E-value=0.033 Score=48.19 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=75.2
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
.......+|++||=+|+| +|-.+..+++..|-..|++++.+++.++.+++- |... +.+...+ .. .+ -+.+
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d--Ae-~L-Pf~D 117 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD--AE-NL-PFPD 117 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec--hh-hC-CCCC
Confidence 344556699999988765 488999999999866999999999998877653 2221 1111221 11 11 1233
Q ss_pred CCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414 225 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPSKD 263 (341)
Q Consensus 225 ~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~~~ 263 (341)
..||+|.-+.| -+..+.+..+.|+|+ |+++.+......
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~ 161 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD 161 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence 47899877665 245799999999998 999999876543
No 186
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.42 E-value=0.028 Score=46.98 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=62.0
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
.++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+. +.....+ ..+ +. . .+.+|
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d--~~~-~~-~-~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGR--AEE-FG-Q-EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEecc--Hhh-CC-C-CCCcc
Confidence 345689999998753 5666666665543499999999987766553 45433 1111111 211 11 1 33799
Q ss_pred EEEec-cCC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414 229 RSVEC-TGN-IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 229 ~vld~-~g~-~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+|+-. .+. ...++++.+.|+++ |+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 99843 222 35677889999998 9998874
No 187
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.064 Score=46.26 Aligned_cols=79 Identities=23% Similarity=0.386 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC----Cce-ecCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTD-FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g----~~~-vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
.+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++. ... ..|..+.+ .+.+.+.+... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEA-DVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHH-HHHHHHHHHHHHcCC
Confidence 3578999987 9999999888887899 799998888765543 3332 111 12333221 13333333322 36
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998763
No 188
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.37 E-value=0.015 Score=54.77 Aligned_cols=76 Identities=11% Similarity=0.178 Sum_probs=53.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
-.+.+++|+|+|.+|.+++..+...|+..++.+.++.++.+. +++++...++. + +.+.+.. ..+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHh-ccCCEEEEC
Confidence 357789999999999999999999998889999999877554 45565212221 2 1122211 248999999
Q ss_pred cCChHH
Q 019414 234 TGNIDN 239 (341)
Q Consensus 234 ~g~~~~ 239 (341)
++++..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 988654
No 189
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.36 E-value=0.031 Score=54.20 Aligned_cols=74 Identities=24% Similarity=0.217 Sum_probs=54.6
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
.+.++++|+|+|.|..|++++++++..|+ .|++.+.++++.+.+++.|+..+. ... ..+.+ ..+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~----~~~~l-----~~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD----AVQQI-----ADYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc----hHhHh-----hcCCEEEE
Confidence 45578999999999999999999999999 899999877766667777874432 111 11112 24799999
Q ss_pred ccCCh
Q 019414 233 CTGNI 237 (341)
Q Consensus 233 ~~g~~ 237 (341)
+.|-+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88754
No 190
>PLN02366 spermidine synthase
Probab=96.35 E-value=0.024 Score=51.21 Aligned_cols=100 Identities=20% Similarity=0.140 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecC-----CCCCChhHHHHHHHHhcCCc
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVN-----TSEHDRPIQEVIAEMTNGGV 227 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~-----~~~~~~~~~~~i~~~~~~~~ 227 (341)
...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++.-... .++ ....| ..+.+++..++.+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~D--a~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGD--GVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEECh--HHHHHhhccCCCC
Confidence 4468899998765 556677788766679999999998888887742110 000 00011 3333433334479
Q ss_pred cEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 228 DRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 228 d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
|+|| |+.. +.+.++.+.++|+|+ |.++...
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 9987 4332 124577889999998 9997654
No 191
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.34 E-value=0.011 Score=50.71 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=65.6
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~ 222 (341)
+.+...++++++||-+|+|. |..++.+++..+. ..|++++.+++..+.+++ +|.+.+. ....+ ..+.. .
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~d--~~~~~--~ 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVGD--GTQGW--E 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEECC--cccCC--c
Confidence 34566789999999998764 6666777777653 369999999887766543 4543221 11111 11100 0
Q ss_pred hcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414 223 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 223 ~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
..+.||+|+-........+.+.+.|+++ |+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1137999875443445667888999998 998765
No 192
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.34 E-value=0.061 Score=52.44 Aligned_cols=47 Identities=23% Similarity=0.191 Sum_probs=38.9
Q ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019414 150 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~ 197 (341)
...+.+.|.+|||+|+ |.+|...++.+...|+ +|+++.++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 3456678899999987 9999999999888999 888888888876543
No 193
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.031 Score=48.96 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=51.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS 230 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~v 230 (341)
+|.+|||+|+ |++|.+.++.+...|+ +|+.+++++.+.+.. ++++... ..|..+.+ .+.+.+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4688999987 9999999999988998 888888887765543 4454422 23443322 12222222211 368999
Q ss_pred EeccCC
Q 019414 231 VECTGN 236 (341)
Q Consensus 231 ld~~g~ 236 (341)
+++.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998763
No 194
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.035 Score=47.57 Aligned_cols=77 Identities=16% Similarity=0.302 Sum_probs=52.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.++..+... ..|..+.+ .+.+.+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence 36889986 9999999888877898 8888889888877776666532 33444332 2333222333337999999876
Q ss_pred C
Q 019414 236 N 236 (341)
Q Consensus 236 ~ 236 (341)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 4
No 195
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.01 Score=56.90 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=58.1
Q ss_pred hhcCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHh
Q 019414 150 NVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 150 ~~~~~~~g~~vl----I~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~ 223 (341)
...++++|+++| |+|+ |++|.+++|+++..|+ .|+++.+.+++....+..+.. .++|.+... +.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHHH
Confidence 456788899888 8865 9999999999999999 888887666644333333443 344444322 222222211
Q ss_pred cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 224 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 224 ~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
..++.+++.+.++ |+++.++.
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s 124 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGR 124 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcc
Confidence 2344556666665 77776654
No 196
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.24 E-value=0.11 Score=43.75 Aligned_cols=106 Identities=20% Similarity=0.329 Sum_probs=63.5
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~ 223 (341)
+....+++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++...+. ....+ ..+.+....
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~-~~~~d--~~~~~~~~~ 107 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVE-VIEGS--APECLAQLA 107 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeE-EEECc--hHHHHhhCC
Confidence 34556778899988887643 4455666665533499999999988776654 5543221 11111 222222221
Q ss_pred cCCccEE-EeccCC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 224 NGGVDRS-VECTGN-IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 224 ~~~~d~v-ld~~g~-~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 224444 443222 35788999999998 99888753
No 197
>PRK00811 spermidine synthase; Provisional
Probab=96.24 E-value=0.031 Score=50.03 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=62.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC---------ceecCCCCCChhHHHHHHHHhcCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---------TDFVNTSEHDRPIQEVIAEMTNGG 226 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~i~~~~~~~ 226 (341)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. .++ .....| ..+.+.. ..+.
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv-~v~~~D--a~~~l~~-~~~~ 150 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRV-ELVIGD--GIKFVAE-TENS 150 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCce-EEEECc--hHHHHhh-CCCc
Confidence 457899998765 6667777777677799999999999888877311 111 001111 3333333 3458
Q ss_pred ccEEEeccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 019414 227 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 227 ~d~vld~~g~----------~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+|+|+--... .+.++.+.+.|+++ |.++...
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 9998742211 23467788999998 9988753
No 198
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.17 E-value=0.21 Score=42.41 Aligned_cols=116 Identities=18% Similarity=0.117 Sum_probs=68.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.|.+|||+|+|.+|..-++.+...|+ .|++++.... ..+.+.+.|--..+ ..+.. .. .+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~----~~--dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFD----AD--IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCC----HH--Hh--CCcEEEEECC
Confidence 36789999999999999999999999 7887765432 22223333311111 11211 11 11 3689999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEe
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 282 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~ 282 (341)
+.++.-.......... +..+..........+.++...-..++++.-+
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence 8865666677677665 7777665443333343332222234555433
No 199
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.037 Score=48.41 Aligned_cols=79 Identities=23% Similarity=0.340 Sum_probs=51.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-e--ecCCCCCChhHHHHHHHHh--cC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIAEMT--NG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~--vv~~~~~~~~~~~~i~~~~--~~ 225 (341)
.+.+++|+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+.+ .+.. . ..|..+.+ .+.+.+.+.. .+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQ-SIKAAVAHAETEAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHhcC
Confidence 4688999987 9999999999988999 89999888877654332 1221 1 22333321 1333333221 13
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 200
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.15 E-value=0.014 Score=50.87 Aligned_cols=108 Identities=22% Similarity=0.249 Sum_probs=66.9
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHH-HHHHH
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQ-EVIAE 221 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~-~~i~~ 221 (341)
+....+++||++|+=-|.|+ |.++..+++..| -.+|+..+.++++.+.+++ .|....+.....| +. +...+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence 45668999999999887653 777778888765 3499999999999776654 5654222111111 11 01111
Q ss_pred HhcCCccEEE-eccCChHHHHHHHHHh-cCCCcEEEEEcc
Q 019414 222 MTNGGVDRSV-ECTGNIDNMISAFECV-HDGWGVAVLVGV 259 (341)
Q Consensus 222 ~~~~~~d~vl-d~~g~~~~~~~~~~~l-~~~~g~~v~~g~ 259 (341)
-....+|.|| |--...+.++.+.+.| +++ |+++.+..
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 1123688876 6655557899999999 887 99988853
No 201
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.15 E-value=0.067 Score=47.42 Aligned_cols=110 Identities=21% Similarity=0.293 Sum_probs=66.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-e----cCCCCCChhHHHHHHHH--h
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F----VNTSEHDRPIQEVIAEM--T 223 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v----v~~~~~~~~~~~~i~~~--~ 223 (341)
.|..|+|+|+ +++|.+.+.-.-..|+ .++.+.+..++++.+ ++.+... + .|-++.+ +..+.+... .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence 4677899998 8999988887778898 555555777665554 4455433 2 2333222 133333222 1
Q ss_pred cCCccEEEeccCCh-------------------------HHHHHHHHHhcCCC-cEEEEEccCCCCcccc
Q 019414 224 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKDAVFM 267 (341)
Q Consensus 224 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~ 267 (341)
-+++|+.++..|-. .....++..+.+.+ |+++.++...+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 24799999977631 12334555665544 8999988665544444
No 202
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.13 E-value=0.033 Score=53.71 Aligned_cols=78 Identities=27% Similarity=0.364 Sum_probs=55.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHHcCCceecCCCCCChh
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDRP 214 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~vv~~~~~~~~ 214 (341)
.+.+|+|+|+|+.|+.++..++..|+ .|+..+..+ ...+.++++|++..++..-..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~- 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD- 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc-
Confidence 67899999999999999999999999 787777653 2456778899876655432110
Q ss_pred HHHHHHHHhcCCccEEEeccCChH
Q 019414 215 IQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 215 ~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+ .+.... .++|.||.++|...
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCCC
Confidence 1 111111 26999999999743
No 203
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.032 Score=50.25 Aligned_cols=79 Identities=24% Similarity=0.355 Sum_probs=52.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC--cee---cCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV--TDF---VNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~--~~v---v~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+|.++||+|+ |++|.++++.+...|+ +|+.+++++++.+. .++++. ... .|..+.+ .+.+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 4678999987 9999999999999999 88888888887654 344542 111 3443322 12222332222 37
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 204
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.10 E-value=0.059 Score=45.67 Aligned_cols=35 Identities=34% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
.+.+|+|+|.|++|..+++.+...|..++..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 35779999999999999999999999899999876
No 205
>PRK14967 putative methyltransferase; Provisional
Probab=96.10 E-value=0.082 Score=45.50 Aligned_cols=98 Identities=23% Similarity=0.170 Sum_probs=63.2
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcC
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+....+.. .+ +.+. ..++
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence 334678899999999986 8888888875 55599999999988776554 343221111 11 2221 1234
Q ss_pred CccEEEeccCC---------------------------hHHHHHHHHHhcCCCcEEEEE
Q 019414 226 GVDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 226 ~~d~vld~~g~---------------------------~~~~~~~~~~l~~~~g~~v~~ 257 (341)
.||+|+-..+. ...++++.+.|+++ |+++++
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 79999853210 11345677889997 988865
No 206
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.09 E-value=0.068 Score=47.73 Aligned_cols=101 Identities=25% Similarity=0.353 Sum_probs=61.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
..++|.++|=+|+|+ |.+++. |..+|+.+|++++.++-..+.+++ .+.+..+ .... -........+.||
T Consensus 159 ~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~-~~~~----~~~~~~~~~~~~D 231 (300)
T COG2264 159 LLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAARENARLNGVELLV-QAKG----FLLLEVPENGPFD 231 (300)
T ss_pred hhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHHHHHHHcCCchhh-hccc----ccchhhcccCccc
Confidence 356899999888753 544443 345688799999999877666554 3333200 1110 0011112224799
Q ss_pred EEEecc-CC--hHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 229 RSVECT-GN--IDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 229 ~vld~~-g~--~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+|+-.+ .. ....++....++|+ |++++.|...
T Consensus 232 vIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 232 VIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred EEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 998432 11 13567888899997 9999999654
No 207
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.07 E-value=0.078 Score=42.87 Aligned_cols=90 Identities=30% Similarity=0.346 Sum_probs=58.2
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.... . ..+.+ ...|++|-+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--~------~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--T------LEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--C------HHHHH-----hhCCEEEEC
Confidence 4478899999999999999999999999 99999999877665555555321 0 22222 247999999
Q ss_pred cCChHH-HHHHHHHhcCCCcEEEEEc
Q 019414 234 TGNIDN-MISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 234 ~g~~~~-~~~~~~~l~~~~g~~v~~g 258 (341)
+|.... -.+.++.++++ ..+...|
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~G 110 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAG 110 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESS
T ss_pred CCCccccCHHHHHHhcCC-eEEeccC
Confidence 998654 35778888885 5555555
No 208
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.044 Score=47.21 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=48.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHH---HcCCcee-cCCCCCChhHHHHHHHHhc--CCcc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAK---KFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~---~~g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
+.++||+|+ |.+|..+++.+...|+ +|+.++++.++.. .++ ..+...+ .|..+.+ ++.+.+.+... +++|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQ-AARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHH-HHHHHHHHHHHHhCCcC
Confidence 678999987 9999999998888899 7899988776532 222 2233221 2222211 12222222222 3799
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++++.|.
T Consensus 85 ~vi~~ag~ 92 (239)
T PRK12828 85 ALVNIAGA 92 (239)
T ss_pred EEEECCcc
Confidence 99998763
No 209
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.043 Score=48.36 Aligned_cols=78 Identities=19% Similarity=0.278 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-ee--cCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+.+ .+.+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 8999999998888999 88888888876554322 2322 11 3443322 12222222211 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|++.|
T Consensus 87 ~id~vi~~Ag 96 (263)
T PRK07814 87 RLDIVVNNVG 96 (263)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 210
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.04 E-value=0.044 Score=48.24 Aligned_cols=78 Identities=24% Similarity=0.305 Sum_probs=51.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
++.+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+++. +... ..|..+.+ ...+.+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLD-DHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999988888999 888888888776665543 3211 12333221 12233333222 3689
Q ss_pred EEEeccC
Q 019414 229 RSVECTG 235 (341)
Q Consensus 229 ~vld~~g 235 (341)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
No 211
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.11 Score=45.05 Aligned_cols=100 Identities=19% Similarity=0.228 Sum_probs=57.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
+.++||+|+ |.+|...+..+...|+ .|+.+.++.+ +.+. ++..+... ..|..+.+ .+.+.+.+... +
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 83 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEFG 83 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence 568999987 9999999998888898 7877777543 2222 22233321 23443322 12222222222 3
Q ss_pred CccEEEeccCCh-------------------HHHHHHHHHhcCCCcEEEEEcc
Q 019414 226 GVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 226 ~~d~vld~~g~~-------------------~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
++|+++.+.|.. ..++.+.+.+... ++++.++.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 689998877532 1233444444555 78887764
No 212
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.98 E-value=0.061 Score=48.16 Aligned_cols=42 Identities=24% Similarity=0.254 Sum_probs=37.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~ 197 (341)
.+.+++|+|+|++|.+++..+...|+++|+.+.++.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 457899999999999999999999998999999998886654
No 213
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.98 E-value=0.062 Score=47.72 Aligned_cols=69 Identities=23% Similarity=0.137 Sum_probs=49.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
....+.+++|+|+|+.+.+++.-++..|+.+|+.+.|+.+|.+.+. .++.. +...+ ....+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 3445668999999999999999899999988999999988866543 34321 11011 112589999
Q ss_pred eccC
Q 019414 232 ECTG 235 (341)
Q Consensus 232 d~~g 235 (341)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9975
No 214
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.98 E-value=0.056 Score=49.32 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=52.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-----cC-Cc---eecCCCCCChhHHHHHHHHhcC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-----~g-~~---~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
.|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ .+ .. ..+|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999997 9999998887777899 78888899888654322 11 11 1234443212244455554444
Q ss_pred -CccEEEeccC
Q 019414 226 -GVDRSVECTG 235 (341)
Q Consensus 226 -~~d~vld~~g 235 (341)
.+|+++++.|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 5779998876
No 215
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.97 E-value=0.016 Score=51.98 Aligned_cols=97 Identities=24% Similarity=0.309 Sum_probs=57.7
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
..+|++||=+|+|. |.+++..+ .+|+++|++++.++...+.+++ .|... +......+ ...++||
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~-klGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAA-KLGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHH-HTTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred ccCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence 57889999888642 33333333 3599899999999987666554 33322 21111111 1124799
Q ss_pred EEEeccCChH---HHHHHHHHhcCCCcEEEEEccCCC
Q 019414 229 RSVECTGNID---NMISAFECVHDGWGVAVLVGVPSK 262 (341)
Q Consensus 229 ~vld~~g~~~---~~~~~~~~l~~~~g~~v~~g~~~~ 262 (341)
+|+--.-... ......+.++++ |.+++.|....
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~ 263 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILEE 263 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence 9985543322 344566778897 99999987543
No 216
>PRK04457 spermidine synthase; Provisional
Probab=95.95 E-value=0.1 Score=46.11 Aligned_cols=97 Identities=19% Similarity=0.164 Sum_probs=65.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CC----ceecCCCCCChhHHHHHHHHhcCCccE
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----TDFVNTSEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~----~~vv~~~~~~~~~~~~i~~~~~~~~d~ 229 (341)
.++.+||++|+|+ |..+..+++.....++++++.+++-.+.+++. +. +.+ .....| ..+.+.. ..+.+|+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv-~v~~~D--a~~~l~~-~~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERF-EVIEAD--GAEYIAV-HRHSTDV 139 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCce-EEEECC--HHHHHHh-CCCCCCE
Confidence 3457899999875 77888888877555999999999999998874 32 111 111122 3333433 2347999
Q ss_pred EE-eccCC---------hHHHHHHHHHhcCCCcEEEEE
Q 019414 230 SV-ECTGN---------IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 230 vl-d~~g~---------~~~~~~~~~~l~~~~g~~v~~ 257 (341)
|+ |.... .+.++.+.+.|+|+ |+++..
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 86 54321 36788999999998 998874
No 217
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.051 Score=48.31 Aligned_cols=78 Identities=24% Similarity=0.374 Sum_probs=51.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce----ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGVDR 229 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~i~~~~~--~~~d~ 229 (341)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+..... ..|..+.+ .+.+.+.+... +++|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCCE
Confidence 567999987 9999999998888898 8999999888876655532221 22333322 12222332222 36899
Q ss_pred EEeccCC
Q 019414 230 SVECTGN 236 (341)
Q Consensus 230 vld~~g~ 236 (341)
++++.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999875
No 218
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.048 Score=47.68 Aligned_cols=79 Identities=27% Similarity=0.330 Sum_probs=51.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce----ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
++.++||+|+ |++|...++.+...|+ +|+.+.++++..+...+..... ..|..+.+ .+.+.+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQ-SVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999888888999 8888888877655555443211 23333221 12222222211 3689
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++++.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 219
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.059 Score=47.38 Aligned_cols=81 Identities=25% Similarity=0.342 Sum_probs=51.8
Q ss_pred CCCCCEEEEECC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-----cCCcee----cCCCCCChhHHHHHHHH
Q 019414 154 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF----VNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 154 ~~~g~~vlI~G~-g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~v----v~~~~~~~~~~~~i~~~ 222 (341)
+.++.++||+|+ | ++|.+.++.+...|+ +|+.+++++++.+...+ ++...+ .|..+.+ .+.+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence 345788999986 6 799999999999999 78888888776544322 343222 2443322 122222222
Q ss_pred h--cCCccEEEeccCC
Q 019414 223 T--NGGVDRSVECTGN 236 (341)
Q Consensus 223 ~--~~~~d~vld~~g~ 236 (341)
. .+++|++|++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 1479999999874
No 220
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.93 E-value=0.058 Score=47.50 Aligned_cols=78 Identities=22% Similarity=0.310 Sum_probs=51.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc---eecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT---DFVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~---~vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
++.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.. ...|..+.+ .+.+.+.+... +++|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA-DNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHhcCCCC
Confidence 4678999987 9999999998888999 88888888877665543 3321 122333221 12223333222 3699
Q ss_pred EEEeccC
Q 019414 229 RSVECTG 235 (341)
Q Consensus 229 ~vld~~g 235 (341)
+++++.|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999887
No 221
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.92 E-value=0.09 Score=43.09 Aligned_cols=97 Identities=20% Similarity=0.190 Sum_probs=61.9
Q ss_pred hhccccchhhhhhhhhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414 135 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 213 (341)
Q Consensus 135 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~ 213 (341)
...|+...++...+.+...--.|.+++|+|+|. +|..++..++..|+ +|+.+.++.+.
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~-------------------- 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN-------------------- 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh--------------------
Confidence 334444444443333333335789999999986 59989999999999 77777665211
Q ss_pred hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
..+.+. .+|+||-+++.+..+..- .+.++ -.++.++...
T Consensus 81 -l~~~l~-----~aDiVIsat~~~~ii~~~--~~~~~-~viIDla~pr 119 (168)
T cd01080 81 -LKEHTK-----QADIVIVAVGKPGLVKGD--MVKPG-AVVIDVGINR 119 (168)
T ss_pred -HHHHHh-----hCCEEEEcCCCCceecHH--HccCC-eEEEEccCCC
Confidence 222222 389999999886644432 46665 6777777543
No 222
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.91 E-value=0.065 Score=46.60 Aligned_cols=78 Identities=21% Similarity=0.374 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |++|+..++.+...|+ +|+.+++++++.+.+ +..+... .+|..+.+ .+.+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEE-DVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 9999999999988998 788888887665433 2334321 23332221 13232333222 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|.+|++.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 223
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.91 E-value=0.019 Score=43.01 Aligned_cols=91 Identities=20% Similarity=0.184 Sum_probs=58.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +.+++ ... . .... +. + .-.++++|+-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~-~i~-~---~~~~--~~----~-~l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEG-LIQ-L---IRRE--FE----E-DLDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHT-SCE-E---EESS---G----G-GCTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhh-HHH-H---Hhhh--HH----H-HHhhheEEEecCC
Confidence 46789999999999999999999998 888887665 22221 111 1 1111 21 0 0136999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKD 263 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~ 263 (341)
.++.-++..+..+.. +..+...+....
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~ 96 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPEL 96 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence 877667777777766 888888765443
No 224
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.90 E-value=0.066 Score=43.92 Aligned_cols=93 Identities=16% Similarity=0.309 Sum_probs=60.3
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--ceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+|.|+|+ |-+|...++-|+.+|. .|+++.++++|....+..-+ ..+++..+ +.+. + .++|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~----~a~~---l--~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS----LASD---L--AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh----hHhh---h--cCCceEEEecc
Confidence 4788987 9999999999999999 99999999998755422211 01222221 1111 1 37999999987
Q ss_pred Ch---------HHHHHHHHHhcC-CCcEEEEEccCC
Q 019414 236 NI---------DNMISAFECVHD-GWGVAVLVGVPS 261 (341)
Q Consensus 236 ~~---------~~~~~~~~~l~~-~~g~~v~~g~~~ 261 (341)
.. ...+.++..++. +-.++..+|...
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 53 123445666654 224777777543
No 225
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.067 Score=47.38 Aligned_cols=78 Identities=24% Similarity=0.340 Sum_probs=51.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-Cce-ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS 230 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g-~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~v 230 (341)
+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++ +.. ..|..+.+ .+.+.+..... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 568999987 9999999988888899 788888888776543 3444 222 23444332 13222332222 379999
Q ss_pred EeccCC
Q 019414 231 VECTGN 236 (341)
Q Consensus 231 ld~~g~ 236 (341)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 998873
No 226
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.87 E-value=0.079 Score=48.03 Aligned_cols=91 Identities=26% Similarity=0.421 Sum_probs=61.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
.+|.|+|.|.+|.+.+..++..|. ..|++.++++++.+.+++.|....+. .+ ..+.+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~--~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS--AAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC--HHHHh-----cCCCEEEECCCH
Confidence 579999999999999998888884 38999999999988888887532111 11 21111 258999999865
Q ss_pred hHH---HHHHHHHhcCCCcEEEEEcc
Q 019414 237 IDN---MISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 237 ~~~---~~~~~~~l~~~~g~~v~~g~ 259 (341)
... ++.....++++ ..++.++.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 322 33333455665 66666654
No 227
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.86 E-value=0.027 Score=50.07 Aligned_cols=44 Identities=36% Similarity=0.449 Sum_probs=39.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~ 199 (341)
+|.+++|+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999998899999999988666544
No 228
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.059 Score=47.13 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=48.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHHHHHhcCCcc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
+.++||+|+ |++|...++.+...|+ +|+++.+++++.+.+++ .+... ..|..+. +.+.+...+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence 357999987 9999999999999998 88888887766544432 33221 1233332 223333334799
Q ss_pred EEEeccC
Q 019414 229 RSVECTG 235 (341)
Q Consensus 229 ~vld~~g 235 (341)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999877
No 229
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.82 E-value=0.078 Score=42.58 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=49.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+ ..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence 456789999999999999988888864489999888877654 45555421 011111 1111 136899999
Q ss_pred ccCCh
Q 019414 233 CTGNI 237 (341)
Q Consensus 233 ~~g~~ 237 (341)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98763
No 230
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.059 Score=47.31 Aligned_cols=80 Identities=25% Similarity=0.283 Sum_probs=51.4
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc--e--ecCCCCCChhHHHHHHHHh--cCC
Q 019414 155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--D--FVNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~--~--vv~~~~~~~~~~~~i~~~~--~~~ 226 (341)
-++.++||+|+ |.+|..+++.+...|+ .|+.+.++.+..+.+.+ ..-. . ..|..+.+ .+.+.+.+.. -++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERFGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence 46789999987 9999999999988999 78999888776655433 2211 1 23333322 1222222211 137
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|+||++.|.
T Consensus 87 ~d~vi~~ag~ 96 (264)
T PRK12829 87 LDVLVNNAGI 96 (264)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 231
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.80 E-value=0.048 Score=54.71 Aligned_cols=76 Identities=28% Similarity=0.336 Sum_probs=55.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHHcCCceecCCCCC-Ch
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR 213 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vv~~~~~-~~ 213 (341)
.+.+|+|+|+|+.|+.++..++..|+ .|+..++.+. ..+.++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 4567788898766654321 11
Q ss_pred hHHHHHHHHhcCCccEEEeccCCh
Q 019414 214 PIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 214 ~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
.+. ++. .++|.||.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 122 121 3699999999863
No 232
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.78 E-value=0.037 Score=49.49 Aligned_cols=75 Identities=13% Similarity=0.058 Sum_probs=50.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
++.+++|+|+|+.+.+++.-+..+|+++|+.+.|+.+|.+.+ ++++... +..... . +.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhcc-cCCCEEEEC
Confidence 577899999999999999999999998999999998876654 4443211 110100 0 1111111 358999999
Q ss_pred cCC
Q 019414 234 TGN 236 (341)
Q Consensus 234 ~g~ 236 (341)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 865
No 233
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.77 E-value=0.046 Score=46.14 Aligned_cols=98 Identities=15% Similarity=0.247 Sum_probs=61.3
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHH-hc
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM-TN 224 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~-~~ 224 (341)
......++.+||-+|+|. |..+..+|+. |. .|++++.+++..+.+++. +...+ .....+ + .+. .+
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--L----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--h----hhCCcC
Confidence 334455678999998865 6677777775 77 999999999877766542 22211 111111 1 111 12
Q ss_pred CCccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEEc
Q 019414 225 GGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 225 ~~~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+.||+|+.... . ...+..+.+.|+|+ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 36999986432 1 24577888899998 9865544
No 234
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.76 E-value=0.058 Score=48.16 Aligned_cols=96 Identities=19% Similarity=0.182 Sum_probs=58.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
..+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+.+. +++....+.. +.+ ..+. -..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~~~-----~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQEE-----LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--chhc-----cccCCEEEEC
Confidence 35678999999999999999999999669999999988866543 3432110111 000 1110 1358999999
Q ss_pred cCChHH-----HHHHHHHhcCCCcEEEEEcc
Q 019414 234 TGNIDN-----MISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 234 ~g~~~~-----~~~~~~~l~~~~g~~v~~g~ 259 (341)
++.... .......+.+. ..++.+-.
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~DivY 222 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMIY 222 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence 864211 01123455554 56655543
No 235
>PRK01581 speE spermidine synthase; Validated
Probab=95.75 E-value=0.16 Score=46.70 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=63.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-C----------ceecCCCCCChhHHHHHHHHhc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----------TDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-~----------~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
...+|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. . .++ ...-.| ..+.+.. ..
T Consensus 150 ~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi~D--a~~fL~~-~~ 224 (374)
T PRK01581 150 DPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHVCD--AKEFLSS-PS 224 (374)
T ss_pred CCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEECc--HHHHHHh-cC
Confidence 34689999975 4667777777766679999999999999998631 0 111 000011 3333333 34
Q ss_pred CCccEEE-eccCC----------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 225 GGVDRSV-ECTGN----------IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 225 ~~~d~vl-d~~g~----------~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
+.||+|| |.... .+.++.+.+.|+|+ |.++....
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 4799987 53211 23577889999998 99877643
No 236
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.73 E-value=0.054 Score=47.11 Aligned_cols=79 Identities=23% Similarity=0.291 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC--Cc---eecCCCCCChhHHHHHHHHh--cCC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG--VT---DFVNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g--~~---~vv~~~~~~~~~~~~i~~~~--~~~ 226 (341)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+ ..+. .. ...|..+.+ .+...+.+.. .++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEA-DVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence 3568999987 9999999888888899 799999988775543 2222 11 122333222 1222222221 136
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 237
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.071 Score=46.63 Aligned_cols=79 Identities=23% Similarity=0.320 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++.++.+.+. +.+... ..|..+.+ .+.+.+.+... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 3678999987 9999999999888999 8888888877655432 223221 23433322 12222222221 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998763
No 238
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.71 E-value=0.11 Score=43.85 Aligned_cols=81 Identities=30% Similarity=0.322 Sum_probs=55.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.|.+++|+|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +++. .++..+ + .....|+++-|.
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l-------~~~~~Dv~vp~A 93 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE----I-------YSVDADVFAPCA 93 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh----h-------ccccCCEEEecc
Confidence 56789999999999999999999999 88899998887766544 4653 222211 1 112588888665
Q ss_pred CChHHHHHHHHHhcC
Q 019414 235 GNIDNMISAFECVHD 249 (341)
Q Consensus 235 g~~~~~~~~~~~l~~ 249 (341)
.....-...++.++.
T Consensus 94 ~~~~I~~~~~~~l~~ 108 (200)
T cd01075 94 LGGVINDDTIPQLKA 108 (200)
T ss_pred cccccCHHHHHHcCC
Confidence 443333444455543
No 239
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.67 E-value=0.11 Score=45.09 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=66.9
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh-
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 223 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~- 223 (341)
...+..+..+||=+|+| .|..++.+++..+ ..+|++++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence 34566677889988864 3666667777653 4499999999988777654 4543222222222 444444332
Q ss_pred ---cCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEEEc
Q 019414 224 ---NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 224 ---~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.+.||.|| |+- .....++.++++++++ |.++.-+
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 23799997 432 2245688899999997 8877644
No 240
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.097 Score=46.05 Aligned_cols=79 Identities=24% Similarity=0.395 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c--CCc-ee--cCCCCCChhHHHHHHHHh-cCCc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DF--VNTSEHDRPIQEVIAEMT-NGGV 227 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~--g~~-~v--v~~~~~~~~~~~~i~~~~-~~~~ 227 (341)
++.++||+|+ |++|...+..+...|+ .|+++++++++.+.+.+ + +.. .. .|..+.+ .+.+...... .+++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEA-GREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHhcCCC
Confidence 3568999986 9999999988888899 88999888877655432 2 211 11 2333221 1221111111 2478
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|.++++.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998774
No 241
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.096 Score=47.09 Aligned_cols=78 Identities=26% Similarity=0.420 Sum_probs=50.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-e--cCCCCCChhHHHHHHHHh--cCC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-v--v~~~~~~~~~~~~i~~~~--~~~ 226 (341)
+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+.+ .+.+.+.... -++
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD-AVDALVADVEKRIGG 117 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcCC
Confidence 468999987 9999999998888898 89999898877554322 23321 1 2333221 1222222221 137
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|+++++.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 242
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.11 Score=45.01 Aligned_cols=80 Identities=28% Similarity=0.375 Sum_probs=51.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCC-c---eecCCCCCC----hhHHHHHHHH
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T---DFVNTSEHD----RPIQEVIAEM 222 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~-~---~vv~~~~~~----~~~~~~i~~~ 222 (341)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+. . ..+|..+.+ ..+.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3568999987 9999999988888899 8999989887655432 2221 1 112332211 1133344444
Q ss_pred hcCCccEEEeccCC
Q 019414 223 TNGGVDRSVECTGN 236 (341)
Q Consensus 223 ~~~~~d~vld~~g~ 236 (341)
..+.+|++|++.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 43478999998873
No 243
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.09 Score=45.74 Aligned_cols=79 Identities=25% Similarity=0.303 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCCc---eecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT---DFVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~---~vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+.. ...|..+.+ .+.+.+..... +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 3568999987 9999999988888898 8888988876543332 2 2221 123333322 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998873
No 244
>PLN02476 O-methyltransferase
Probab=95.63 E-value=0.095 Score=46.52 Aligned_cols=105 Identities=20% Similarity=0.209 Sum_probs=67.4
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHh-
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT- 223 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~- 223 (341)
...+..+..+||=+|++ +|..++.+|+.++ -.+|++++.+++..+.++ +.|...-+.....+ ..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence 34566677899999863 3666667777663 237999999999877765 45654322222222 444443331
Q ss_pred ---cCCccEEE-eccC--ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 224 ---NGGVDRSV-ECTG--NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 224 ---~~~~d~vl-d~~g--~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.+.||.|| |+-- ..+.++.++++++++ |.++.=+
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 24799997 4431 235688899999997 8877654
No 245
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.082 Score=46.30 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
++.++||+|+ |++|...++.+...|+ +|+.+.+++++.+..++ .+... ..|..+.+ .+...+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDA-QCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcCC
Confidence 3568999987 9999999888888899 77778787776544433 33321 23333321 12222322222 37
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 246
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.59 E-value=0.13 Score=43.14 Aligned_cols=76 Identities=29% Similarity=0.288 Sum_probs=48.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~-vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
++.+++|+|+ |.+|.+++..+...|. +|+.+.++.++.+.+.+ + +... .++..+ .. .+.+.. .+.|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~-~~~~~~-~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----DA-ARAAAI-KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----HH-HHHHHH-hcCC
Confidence 5678999986 9999998888888887 88888888877654432 3 2221 112221 11 111211 2589
Q ss_pred EEEeccCChH
Q 019414 229 RSVECTGNID 238 (341)
Q Consensus 229 ~vld~~g~~~ 238 (341)
+||.+.+.+.
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999876644
No 247
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.58 E-value=0.18 Score=43.46 Aligned_cols=91 Identities=21% Similarity=0.204 Sum_probs=58.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHHcCCceecCCCCCChhHHHHHH
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA 220 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~--~vv~v~~~----~~~--------~~~~~~~g~~~vv~~~~~~~~~~~~i~ 220 (341)
-.+.+++|+|+|+.|.+.+..+...|.+ +++.++++ .++ .+++++++... .+ .+ +.+.++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~--l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT--LKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC--HHHHHh
Confidence 3567999999999999999888888997 89999988 343 33445443211 10 11 333332
Q ss_pred HHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414 221 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 221 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
++|++|++++..-.-+..++.+.+. ..+..+
T Consensus 97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~l 127 (226)
T cd05311 97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFAL 127 (226)
T ss_pred -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEe
Confidence 3899999986322223555666665 555444
No 248
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.58 E-value=0.096 Score=45.83 Aligned_cols=78 Identities=22% Similarity=0.271 Sum_probs=47.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 231 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl 231 (341)
+.+++|+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.+... ..|..+.+ ...+.+.+... +++|++|
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 578999987 9999999988888899 6666544 444444454444322 23443322 12233333222 3699999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
++.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98864
No 249
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.58 E-value=0.089 Score=49.34 Aligned_cols=91 Identities=26% Similarity=0.367 Sum_probs=55.4
Q ss_pred EEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH--cCC--c-eecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 160 VAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK--FGV--T-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~--~g~--~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
|+|+|+|.+|..+++.+...+- .+|++++++.++.+.+.+ .+. . ..+|..+. +.+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP-----ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH-----HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH-----HHHHHHHh-cCCEEEEC
Confidence 6889999999999999887764 389999999999776543 222 1 23344332 22444433 36999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEE
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
+|.......+-.|+..+ -.++..
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CccchhHHHHHHHHHhC-CCeecc
Confidence 98754444555555554 566663
No 250
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.58 E-value=0.32 Score=39.60 Aligned_cols=88 Identities=20% Similarity=0.284 Sum_probs=58.0
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|.++|.|.+|...+.-+...|+ .|.+.+++.++.+.+.+.|+... +. ..+.+.+ .|+||-|+.+.+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~s------~~e~~~~-----~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-DS------PAEAAEQ-----ADVVILCVPDDD 69 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-SS------HHHHHHH-----BSEEEE-SSSHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-hh------hhhHhhc-----ccceEeecccch
Confidence 68899999999999999888999 89999999999998888875432 11 3333322 588888887755
Q ss_pred HHHHHHH------HhcCCCcEEEEEccC
Q 019414 239 NMISAFE------CVHDGWGVAVLVGVP 260 (341)
Q Consensus 239 ~~~~~~~------~l~~~~g~~v~~g~~ 260 (341)
..+..+. .+.++ ..++.++..
T Consensus 70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 5555443 34454 566666543
No 251
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.11 Score=45.95 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCc---eecCCCCCChhHHHHHHHHh-cC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT---DFVNTSEHDRPIQEVIAEMT-NG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~---~vv~~~~~~~~~~~~i~~~~-~~ 225 (341)
.+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ + +.. ...|..+.+ ...+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence 3678999987 8999999999999999 88888888777554332 2 322 123433322 1222222221 14
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 252
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.11 Score=44.50 Aligned_cols=74 Identities=23% Similarity=0.290 Sum_probs=48.3
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++... ..|..+.+ .+.+.+.+. .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHH-hhcCcEEEECCC
Confidence 4889987 9999999998888898 888888888776544 4444432 23443322 133223222 236899998764
No 253
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.57 E-value=0.1 Score=48.85 Aligned_cols=95 Identities=24% Similarity=0.271 Sum_probs=63.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.+.++||+|+|-+|..++..+...|...|+.+-|+.+|.. +++++|+.. +..++ ..+.+ ..+|+||-++
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~e----l~~~l-----~~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALEE----LLEAL-----AEADVVISST 246 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHHH----HHHhh-----hhCCEEEEec
Confidence 6788999999999999999999999889999989888854 678898542 22221 22222 1489999998
Q ss_pred CChHH---HHHHHHHhcCCCc-EEEEEccC
Q 019414 235 GNIDN---MISAFECVHDGWG-VAVLVGVP 260 (341)
Q Consensus 235 g~~~~---~~~~~~~l~~~~g-~~v~~g~~ 260 (341)
+++.. -......+..... .+++++.+
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 87542 2233334443212 35566544
No 254
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.56 E-value=0.31 Score=43.12 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=59.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------h----HHHHHHcCCce-ecCCCCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-------------------R----FEEAKKFGVTD-FVNTSEH 211 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-------------------~----~~~~~~~g~~~-vv~~~~~ 211 (341)
.+.+|+|+|.|++|..++..+-..|..+++.++.+.- | .+.++++.... +....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4578999999999999999999999888888886521 1 11222333321 1111110
Q ss_pred ChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 212 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 212 ~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
- -.+.+.++....+|+||||..+...-..+.+.+...+-.++..+...
T Consensus 109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 0 01123333334699999999875443334444443324455555443
No 255
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.52 E-value=0.14 Score=45.66 Aligned_cols=95 Identities=21% Similarity=0.262 Sum_probs=64.7
Q ss_pred hccccchhhhhhhhhhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414 136 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 213 (341)
Q Consensus 136 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~ 213 (341)
.+||+....+.. ++..++ -.|.+++|+|.| .+|.-+++++...|+ .|+.+.+... +
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------~- 194 (286)
T PRK14175 137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------D- 194 (286)
T ss_pred CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------h-
Confidence 355554433333 344443 478999999985 499999999999999 7877754321 1
Q ss_pred hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+.+.++ ..|+||-++|.+..+.. ..++++ ..++.+|...
T Consensus 195 -l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 195 -MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred -HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 222222 38999999998766665 357887 8888988643
No 256
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.1 Score=45.66 Aligned_cols=80 Identities=24% Similarity=0.318 Sum_probs=50.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.+++|+|+ |++|...++.+...|++.|+.++++.++.. .+++.+... .+|..+.+ .+.+.+..... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4578999987 999999999999999944888888766544 233344332 23443322 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|.+|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 257
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.50 E-value=0.18 Score=45.28 Aligned_cols=94 Identities=17% Similarity=0.167 Sum_probs=56.4
Q ss_pred CEEEEECCCHHHHH-HHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 158 SSVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 158 ~~vlI~G~g~~G~~-a~~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
-+|.|+|+|.+|.. +..+.+.-+.+.+.+++.+++ .++.++++|..... .+ +...+.......+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~--ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EG--IDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CC--HHHHHhCcCCCCCCEEEECC
Confidence 46899999999987 445555446644445555554 34667778864322 11 32222211113699999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
+...+.+.+..++.. |+.++...
T Consensus 79 ~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 79 SAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CHHHHHHHHHHHHHc--CCeEEECC
Confidence 886666666666665 55555543
No 258
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.50 E-value=0.56 Score=41.96 Aligned_cols=60 Identities=22% Similarity=0.205 Sum_probs=45.8
Q ss_pred hhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHHcCCceecCCC
Q 019414 149 LNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS 209 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~vv~~~ 209 (341)
.....++||++| |=+ +|+.|.+.+++|+.+|++-+++.. .+.+|+++++.+|+..+..+.
T Consensus 54 e~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 355679999944 445 499999999999999995444443 377999999999998765554
No 259
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.48 E-value=0.1 Score=47.43 Aligned_cols=70 Identities=19% Similarity=0.239 Sum_probs=48.4
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+|+|+|+ |-+|...+..+...|+ +|.++.++.++...+...+++.+. |..+.+ .+.+.. .++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~-----~l~~al-~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLPE-----TLPPSF-KGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCHH-----HHHHHH-CCCCEEEECCC
Confidence 5899987 9999999998888898 888888887766555555654432 333221 222222 25899999865
No 260
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.46 E-value=0.13 Score=44.67 Aligned_cols=79 Identities=25% Similarity=0.362 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV 227 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~ 227 (341)
.+.++||+|+ |++|.+.+..+...|+ +|+.+++++.. .+.+++.+... ..|..+.+ .+...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIE-AIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4678999987 9999999988888999 88888776522 23344444321 23433322 13323333222 369
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998764
No 261
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.45 E-value=0.5 Score=35.75 Aligned_cols=92 Identities=22% Similarity=0.279 Sum_probs=60.3
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414 160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 239 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 239 (341)
|+|.|.|.+|...++.++..+. +|+.++.++++.+.+++.|... +..+..+ .+.+++..-..++.++-+.+..+.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~-i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEV-IYGDATD---PEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEE-EES-TTS---HHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccc-ccccchh---hhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999665 8999999999999999988653 3233222 223444333478888888766442
Q ss_pred ---HHHHHHHhcCCCcEEEEE
Q 019414 240 ---MISAFECVHDGWGVAVLV 257 (341)
Q Consensus 240 ---~~~~~~~l~~~~g~~v~~ 257 (341)
+....+.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 22333444554 455443
No 262
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.44 E-value=0.2 Score=42.98 Aligned_cols=105 Identities=19% Similarity=0.292 Sum_probs=61.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh------hhHHHH--HHcCCcee---------cCCCCC----Chh
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS------KRFEEA--KKFGVTDF---------VNTSEH----DRP 214 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~------~~~~~~--~~~g~~~v---------v~~~~~----~~~ 214 (341)
+.++|+|+|.|++|..++..+-+.|..++..++.++ .|+-.+ ...|-..+ +|+.-. +..
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 457899999999999999999999998888887654 222111 12221110 122111 001
Q ss_pred -HHHHHHHHhcCCccEEEeccCChHHHHHHHH-HhcCCCcEEEEEccCC
Q 019414 215 -IQEVIAEMTNGGVDRSVECTGNIDNMISAFE-CVHDGWGVAVLVGVPS 261 (341)
Q Consensus 215 -~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~-~l~~~~g~~v~~g~~~ 261 (341)
-.+.+.++...++|+|+||.-+-..--.++. |.+.+ -.++..+...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 1233455555689999999865443333333 44444 5556555433
No 263
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.43 E-value=0.54 Score=39.80 Aligned_cols=99 Identities=13% Similarity=0.018 Sum_probs=56.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.|.+|||+|+|.+|...+..+...|+ .|+++.....+ .+++.+ +.- ...... +... .-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~----~~~~----~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKE----FEPS----DIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecC----CChh----hcCCceEEEEc
Confidence 46789999999999998888888898 77777554221 122222 211 111111 1100 01268999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccc
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 267 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~ 267 (341)
++.++.-....... .. +.++...+......+.
T Consensus 78 T~d~elN~~i~~~a-~~-~~lvn~~d~~~~~~f~ 109 (202)
T PRK06718 78 TNDPRVNEQVKEDL-PE-NALFNVITDAESGNVV 109 (202)
T ss_pred CCCHHHHHHHHHHH-Hh-CCcEEECCCCccCeEE
Confidence 98865544444444 43 5566554433333333
No 264
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.12 Score=45.26 Aligned_cols=78 Identities=19% Similarity=0.290 Sum_probs=50.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-e--cCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+.+ ...+.+.+... ++
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFGG 83 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcCC
Confidence 568999987 9999999988888999 888888887775543 2234322 1 2333322 12222332222 37
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|+++++.|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 265
>PRK06196 oxidoreductase; Provisional
Probab=95.40 E-value=0.13 Score=46.70 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-Cce-ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR 229 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g-~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~ 229 (341)
.+.++||+|+ |++|.+++..+...|+ +|+.+.++.++.+.+ .++. +.. ..|..+.+ .+.+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~-~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLE-SVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHH-HHHHHHHHHHhcCCCCCE
Confidence 3568999987 9999999988888899 888888887765443 2332 211 23333321 13233333222 37999
Q ss_pred EEeccC
Q 019414 230 SVECTG 235 (341)
Q Consensus 230 vld~~g 235 (341)
+|++.|
T Consensus 103 li~nAg 108 (315)
T PRK06196 103 LINNAG 108 (315)
T ss_pred EEECCC
Confidence 999887
No 266
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.38 E-value=0.15 Score=43.95 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=49.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 231 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl 231 (341)
+.++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.+++.++.. ..|..+.+ ...+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence 357899987 9999999998888999 88888777643 33445555432 23433322 13333333222 3699999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98773
No 267
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.13 Score=44.72 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d 228 (341)
++.+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+. .++++... ..|..+.+. .+.+.+.+. .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 3578999987 9999999999999999 88889888766544 34455432 123322210 122222222 13689
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
++|++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998873
No 268
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.37 E-value=0.074 Score=47.29 Aligned_cols=98 Identities=21% Similarity=0.185 Sum_probs=69.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc-
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT- 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~- 234 (341)
+..+|.|+|+|.+|.-++.+|.-+|+ .|...+.+.+|++.+..+-..++.-..+....+.+.+. +.|++|.++
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEE
Confidence 34568889999999999999999999 99999999999999888655443222222112333332 478888753
Q ss_pred --CC--hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414 235 --GN--ID-NMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 235 --g~--~~-~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
|. |. ..++.++.+.|+ +.++.+...
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiD 270 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAID 270 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEc
Confidence 21 22 456778999997 999988653
No 269
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.13 Score=44.98 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=49.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCC----c-eecCCCCCChhHHHHHHHHhc--CCc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV----T-DFVNTSEHDRPIQEVIAEMTN--GGV 227 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~----~-~vv~~~~~~~~~~~~i~~~~~--~~~ 227 (341)
+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +.. . ..+|..+.+ .+.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDAD-ALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHH-HHHHHHHHHHHhCCCC
Confidence 357999986 9999999888888899 88888888877654432 321 1 123443322 23333333222 258
Q ss_pred cEEEeccC
Q 019414 228 DRSVECTG 235 (341)
Q Consensus 228 d~vld~~g 235 (341)
|+++++.|
T Consensus 80 d~lv~~ag 87 (257)
T PRK07024 80 DVVIANAG 87 (257)
T ss_pred CEEEECCC
Confidence 99999876
No 270
>PRK08317 hypothetical protein; Provisional
Probab=95.35 E-value=0.099 Score=45.07 Aligned_cols=105 Identities=24% Similarity=0.332 Sum_probs=68.1
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc--CCceecCCCCCChhHHHHHHHHhcC
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--GVTDFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~--g~~~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
.+..++.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. .....+.....+ ... .....+
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~--~~~~~~ 86 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADG--LPFPDG 86 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--ccc--CCCCCC
Confidence 4567888999999999875 888888888773 34899999999988887764 111001011011 000 011224
Q ss_pred CccEEEecc-----CC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 226 GVDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 226 ~~d~vld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.+|+|+-.. .. ...+..+.++|+++ |.+++...
T Consensus 87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 87 SFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 788887421 12 34688999999998 99987753
No 271
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.35 E-value=0.084 Score=53.17 Aligned_cols=75 Identities=24% Similarity=0.304 Sum_probs=52.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHHcCCceecCCCC-CCh
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSE-HDR 213 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vv~~~~-~~~ 213 (341)
.+.+|+|+|+|+.|+.++..++..|+ .|+++++.+. ..+.++++|++...+..- .+.
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 57899999999999999999999999 7888876543 345667788765443321 110
Q ss_pred hHHHHHHHHhcCCccEEEeccCC
Q 019414 214 PIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 214 ~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
.+.+ + . ..+|.||.++|.
T Consensus 405 ~~~~-~---~-~~~DavilAtGa 422 (654)
T PRK12769 405 SLES-L---L-EDYDAVFVGVGT 422 (654)
T ss_pred CHHH-H---H-hcCCEEEEeCCC
Confidence 1211 1 1 259999998885
No 272
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.13 Score=45.32 Aligned_cols=79 Identities=25% Similarity=0.292 Sum_probs=51.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+. .++++... ..|..+.+ .+.+.+.+... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 3578999987 9999999998888999 89998888776544 34444321 23443322 12222332221 3689
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998763
No 273
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.13 Score=45.58 Aligned_cols=77 Identities=17% Similarity=0.252 Sum_probs=50.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCc-e--ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT-D--FVNTSEHDRPIQEVIAEMTN--GGVDRS 230 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~~i~~~~~--~~~d~v 230 (341)
.++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++. +.. . ..|..+.+ .+.+.+.+... +++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 46899986 9999999888888898 888888988877665542 221 1 23333322 13333332221 368999
Q ss_pred EeccCC
Q 019414 231 VECTGN 236 (341)
Q Consensus 231 ld~~g~ 236 (341)
|++.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998763
No 274
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.31 E-value=0.16 Score=43.79 Aligned_cols=78 Identities=22% Similarity=0.303 Sum_probs=50.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCcee---cCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v---v~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.++||+|+ |.+|...++.+...|+ .|+.+.+++++.+. +++.+.... .|..+.+ .+.+.+.+... ++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA-AVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence 468999987 9999999988888899 68999888776443 233343221 3443322 13333332221 36
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|.++++.|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 8999998764
No 275
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.18 Score=43.66 Aligned_cols=79 Identities=25% Similarity=0.263 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |.+|...+..+...|. +|+.+++++++.+.+. +.+... ..|..+.+ .+...+..... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPE-AIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 3467999986 9999999999988999 8999988877654432 223221 23333322 12222332222 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 276
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.11 Score=45.72 Aligned_cols=79 Identities=25% Similarity=0.300 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c-CCce----ecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F-GVTD----FVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~-g~~~----vv~~~~~~~~~~~~i~~~~~- 224 (341)
.+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ . +... ..|..+.+ .+.+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4678999987 8999999999988999 88888888876553321 1 1111 22443322 12222222221
Q ss_pred -CCccEEEeccCC
Q 019414 225 -GGVDRSVECTGN 236 (341)
Q Consensus 225 -~~~d~vld~~g~ 236 (341)
+++|+++++.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 369999999873
No 277
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.16 Score=44.49 Aligned_cols=77 Identities=17% Similarity=0.234 Sum_probs=51.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cC-Cc---eecCCCCCChhHHHHHHHHh---cCCcc
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT---DFVNTSEHDRPIQEVIAEMT---NGGVD 228 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g-~~---~vv~~~~~~~~~~~~i~~~~---~~~~d 228 (341)
.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ .+ .. ..+|..+.+ .+.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence 36899987 9999999998888898 88888888887665533 32 11 123444322 1333333321 34799
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998874
No 278
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.27 E-value=0.31 Score=42.18 Aligned_cols=35 Identities=37% Similarity=0.478 Sum_probs=30.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
..+|+|+|.|++|..++..+-+.|..+++.++.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46799999999999999999999998999888654
No 279
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.27 E-value=0.24 Score=45.34 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=63.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCChhhHHHH-HH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEA-KK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 228 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la-~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d 228 (341)
+...+++|+|+|..|.+.+..+ ...+.++|....+++++.+.+ ++ ++.... .+.+ ..+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~----~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS----ADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC----HHHHH-----hcCC
Confidence 3457899999999998776544 467888999999998886543 32 343211 1221 33333 2489
Q ss_pred EEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+|+.|+++.+.+ .. ..++++ -++..+|...
T Consensus 195 iVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcc-hH-HhcCCC-cEEEecCCCC
Confidence 999998875443 33 788997 8888888643
No 280
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.27 E-value=0.15 Score=46.87 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=31.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
+.+|+|+|+|++|..++..+-..|...++.++.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998899888764
No 281
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.08 Score=46.76 Aligned_cols=76 Identities=26% Similarity=0.366 Sum_probs=48.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEEe
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE 232 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vld 232 (341)
+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.. .+... ..|..+.+ .+.+.+..... +++|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDDA-SVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCHH-HHHHHHHHHHHhCCCCCEEEE
Confidence 457999987 9999999988888899 889888887654322 12222 23333322 13333333222 36999999
Q ss_pred ccCC
Q 019414 233 CTGN 236 (341)
Q Consensus 233 ~~g~ 236 (341)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9874
No 282
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.13 Score=44.86 Aligned_cols=77 Identities=22% Similarity=0.337 Sum_probs=48.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eec--CCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~i~~~~~--~~ 226 (341)
|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ .+.. ..+ |..+.+ .+.+.+.+... ++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPE-DVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHhCC
Confidence 457899987 9999999999999999 88888888776544322 2221 122 333221 12222222221 36
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|+++++.|
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 899999876
No 283
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.19 Score=43.58 Aligned_cols=79 Identities=24% Similarity=0.265 Sum_probs=49.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |++|...+..+...|+ +|+.+++++++.+.. ++.+... ..|..+.+ .+.+.+.+... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 9999999999888999 788888887765433 2233221 22433322 12222222111 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 284
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.25 E-value=0.11 Score=43.71 Aligned_cols=99 Identities=16% Similarity=0.161 Sum_probs=59.4
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
.......++.+||-+|+|. |..+..+++ .|. .|++++.+++..+.+++. +.. +.....+ ... .. .+
T Consensus 23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d--~~~--~~-~~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDAYD--INA--AA-LN 92 (195)
T ss_pred HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEecc--chh--cc-cc
Confidence 3444555567899998753 666666666 477 999999999877766542 322 1111111 100 01 12
Q ss_pred CCccEEEecc-----CC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414 225 GGVDRSVECT-----GN---IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 225 ~~~d~vld~~-----g~---~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+.+|+|+... .. ...++.+.+.|+|+ |.++.+.
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 3699987542 11 24677888999998 9865554
No 285
>PLN02823 spermine synthase
Probab=95.25 E-value=0.19 Score=46.03 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=61.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eec-CCCCC--ChhHHHHHHHHhcCCccEEE
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFV-NTSEH--DRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv-~~~~~--~~~~~~~i~~~~~~~~d~vl 231 (341)
..+|||+|+|. |.++..+++..+..+|++++.+++-.+.+++.-.. ..+ |.+-. ..+..+.++ ...+.+|+||
T Consensus 104 pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvIi 181 (336)
T PLN02823 104 PKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVII 181 (336)
T ss_pred CCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEEE
Confidence 46899998763 55566777777777999999999999999874321 011 00000 001333332 2345899986
Q ss_pred -eccC-----------ChHHHH-HHHHHhcCCCcEEEEEc
Q 019414 232 -ECTG-----------NIDNMI-SAFECVHDGWGVAVLVG 258 (341)
Q Consensus 232 -d~~g-----------~~~~~~-~~~~~l~~~~g~~v~~g 258 (341)
|... +.+-++ .+.+.|+++ |.++.-.
T Consensus 182 ~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 182 GDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred ecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 5321 112455 678899998 9887653
No 286
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.24 E-value=0.26 Score=39.96 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=48.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+|+|+|+|.+|.--++.+...|+ .|++++ ++..+.+++++.-.. +.+. +. +..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~----~~----~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT----FS----NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc----cC----hhcCCCceEEEECCC
Confidence 46789999999999998888888898 777773 333333444542111 1111 11 001136899999988
Q ss_pred ChHHHHHHHHHhcC
Q 019414 236 NIDNMISAFECVHD 249 (341)
Q Consensus 236 ~~~~~~~~~~~l~~ 249 (341)
.++.-..+....+.
T Consensus 80 d~e~N~~i~~~a~~ 93 (157)
T PRK06719 80 QHAVNMMVKQAAHD 93 (157)
T ss_pred CHHHHHHHHHHHHH
Confidence 75443334333334
No 287
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.24 Score=42.65 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCC--hhHHHHHHHHhcC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHD--RPIQEVIAEMTNG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~--~~~~~~i~~~~~~ 225 (341)
+|.+++|+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+ ++.+.+. ..|..+.+ ..+.+.+.+..++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3678999987 8999999888888999 788888888775543 2334332 12332221 0122333333332
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999886
No 288
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.14 Score=44.73 Aligned_cols=79 Identities=25% Similarity=0.336 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c---CCc---eecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVT---DFVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~~---~vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ + +.. ...|..+.+ .+...+.+... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDED-QCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHH-HHHHHHHHHHHHcC
Confidence 4578999987 9999999998889999 88888888876544322 2 321 123433322 12222322221 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
.+|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998763
No 289
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.23 E-value=0.27 Score=42.01 Aligned_cols=102 Identities=22% Similarity=0.175 Sum_probs=62.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceecC-------CCCCChh-HHHHHHHHh-
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT- 223 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vv~-------~~~~~~~-~~~~i~~~~- 223 (341)
..++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+ ++.+...... +...+.. ....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999874 788888875 698 999999999988874 3333321000 0000000 000000111
Q ss_pred --cCCccEEEeccCC--------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 224 --NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 224 --~~~~d~vld~~g~--------~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.+.||.|+|+..- ...++.+.++|+|+ |++.+...
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1358999996431 23577899999998 98776654
No 290
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.18 Score=44.24 Aligned_cols=81 Identities=20% Similarity=0.261 Sum_probs=48.9
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhh-HH----HHHHcCCc--ee--cCCCCCChhHHHHHHHH
Q 019414 154 PERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKR-FE----EAKKFGVT--DF--VNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 154 ~~~g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~-~~----~~~~~g~~--~v--v~~~~~~~~~~~~i~~~ 222 (341)
+..+.++||+|+ |++|.+.++-+... |+ +|+.+++++++ .+ .+++.+.. .+ .|..+.+ .+.+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence 456778999987 99999988776666 47 88888887764 33 23333431 12 3333322 122223332
Q ss_pred hc-CCccEEEeccCC
Q 019414 223 TN-GGVDRSVECTGN 236 (341)
Q Consensus 223 ~~-~~~d~vld~~g~ 236 (341)
.. +++|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999887764
No 291
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.15 Score=44.52 Aligned_cols=79 Identities=20% Similarity=0.293 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~ 225 (341)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+. +++.+... ..|..+.+ .+.+.+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA-EVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 3678999987 9999999888888898 78889888766433 23334321 13333221 1222222221 13
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999998773
No 292
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.17 E-value=0.17 Score=44.04 Aligned_cols=35 Identities=31% Similarity=0.443 Sum_probs=30.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
+.+|+|.|+|++|..+++.+...|..+++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 46799999999999999999999998888887654
No 293
>PRK08589 short chain dehydrogenase; Validated
Probab=95.16 E-value=0.14 Score=45.40 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=48.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCc---eecCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVT---DFVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
++.++||+|+ +++|.+.++.+...|+ +|+.++++++..+.+++ .+.. ..+|..+.+ .....+.+... ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence 4678999987 9999999888888899 88888888433333333 2322 123433322 12222322221 36
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998763
No 294
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.16 E-value=0.29 Score=38.78 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=28.4
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
+|+|+|+|++|...++.+...|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999888888765
No 295
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.16 E-value=0.16 Score=45.12 Aligned_cols=78 Identities=15% Similarity=0.243 Sum_probs=47.9
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~-- 224 (341)
.+.++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+ ..+++|.... .|..+.+ ...+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIA-SVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHH-HHHHHHHHHHHHh
Confidence 3578899987 4 899999988888999 7888877653322 2233453222 3443322 12222332222
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+.+|+++++.|
T Consensus 84 g~iD~lVnnAG 94 (271)
T PRK06505 84 GKLDFVVHAIG 94 (271)
T ss_pred CCCCEEEECCc
Confidence 47999999887
No 296
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.15 E-value=0.12 Score=45.16 Aligned_cols=79 Identities=28% Similarity=0.416 Sum_probs=50.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~ 225 (341)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+. +++.|... ..|..+.+ .+.+.+.+.. -+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD-AVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence 4678999987 9999999988888899 88888888766443 22233221 12443322 1222232222 13
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 297
>PRK08264 short chain dehydrogenase; Validated
Probab=95.14 E-value=0.1 Score=44.97 Aligned_cols=75 Identities=19% Similarity=0.298 Sum_probs=48.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--e-ecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--D-FVNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~-vv~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
.+.++||+|+ |.+|...++.+...|+++|+.++++.++.+. .+.. . ..|..+.+ .+.+.+.. . +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~-~-~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEA-A-SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHh-c-CCCCEEE
Confidence 4568999986 9999999999988898678888888766543 2221 1 12333322 12222222 1 2589999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98875
No 298
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.14 E-value=0.16 Score=44.47 Aligned_cols=79 Identities=23% Similarity=0.280 Sum_probs=49.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCcee---cCCCCCChhHHHHHHHHh--cC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMT--NG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v---v~~~~~~~~~~~~i~~~~--~~ 225 (341)
.+.++||+|+ |.+|...++.+...|+ .|+.+.+++++.+. +++.+.... .|..+.+ .+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 3678999987 9999999999989999 78888888765443 233444321 2333322 1222222211 13
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 299
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.13 E-value=0.19 Score=44.13 Aligned_cols=78 Identities=19% Similarity=0.281 Sum_probs=46.8
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~g---~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~-- 224 (341)
.|.++||+|++ ++|.+.++.+...|+ +|+.++++++..+ ..++++.... .|..+.+ +..+.+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPG-QLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHH-HHHHHHHHHHHHc
Confidence 46789999863 899999988888999 7877777754322 2233333222 2333221 12222222221
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 87 g~ld~lv~nAg 97 (258)
T PRK07533 87 GRLDFLLHSIA 97 (258)
T ss_pred CCCCEEEEcCc
Confidence 47999998876
No 300
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.14 Score=46.92 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=51.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|... ..|..+.+ .+.+.+..... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence 4568999987 9999999998888999 888888888775533 3345432 23443322 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 301
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.13 E-value=0.19 Score=45.09 Aligned_cols=57 Identities=18% Similarity=0.108 Sum_probs=47.2
Q ss_pred hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHcCCceec
Q 019414 149 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFV 206 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~---~~~~~~~~~~~g~~~vv 206 (341)
.....+.||.+.||=.+ |++|...+-++...|+ +++.+.. +.||+..++++|+..+.
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 34567899999999986 9999999999999999 6666654 56888899999997653
No 302
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.16 Score=44.64 Aligned_cols=77 Identities=23% Similarity=0.327 Sum_probs=48.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV 227 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~ 227 (341)
.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..+... ..|..+.+ .+.+.+.+... +++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAE-ACERLIEAAVARFGGI 79 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 47899987 9999999998888898 889998887664432 2233321 12333221 13333333322 368
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|++|++.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999863
No 303
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.11 E-value=0.16 Score=46.71 Aligned_cols=34 Identities=38% Similarity=0.485 Sum_probs=30.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
..+|+|+|+|++|..+++.+...|...+..++.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999999999899999876
No 304
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.17 Score=45.93 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=48.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCce---ecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVTD---FVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~~---vv~~~~~~~~~~~~i~~~~~- 224 (341)
.|.+++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+ +++ +... .+|..+.+ ...+.+.+...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence 3678999987 9999999988888998 888888887765432 222 1111 23443322 12222222221
Q ss_pred -CCccEEEeccC
Q 019414 225 -GGVDRSVECTG 235 (341)
Q Consensus 225 -~~~d~vld~~g 235 (341)
+++|++|++.|
T Consensus 91 ~~~iD~li~nAG 102 (313)
T PRK05854 91 GRPIHLLINNAG 102 (313)
T ss_pred CCCccEEEECCc
Confidence 36999998876
No 305
>PRK06194 hypothetical protein; Provisional
Probab=95.09 E-value=0.15 Score=45.46 Aligned_cols=78 Identities=18% Similarity=0.263 Sum_probs=48.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD---FVNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~---vv~~~~~~~~~~~~i~~~~--~~~ 226 (341)
+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.. +++ +... ..|..+.+ .+.+.+.... .++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAA-QVEALADAALERFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 568999987 9999999988888899 888888876654432 222 3321 12333221 1222222221 136
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|++.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 306
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.14 Score=45.32 Aligned_cols=76 Identities=22% Similarity=0.336 Sum_probs=48.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce----ecCCCCCChhHHHHHHHHhc--CCc
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGV 227 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~----vv~~~~~~~~~~~~i~~~~~--~~~ 227 (341)
+++|+|+ |++|..+++.+...|+ .|+.+++++++.+.+ +..+... ..|..+.+ .+.+.+.+... +++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence 5899987 9999999998888998 788888887664432 2233321 23443322 12222222211 369
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|++|++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999998874
No 307
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.07 E-value=0.2 Score=42.79 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34679999999999999999999999889999877
No 308
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.06 E-value=0.16 Score=44.22 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=49.4
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDRSV 231 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~vl 231 (341)
+++|+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ ++... ..|..+.+ .+.+.+.+... +++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRA-AIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 5889986 9999999999888999 88999898877665433 34321 12333321 12232332222 3699999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 88763
No 309
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.16 Score=44.23 Aligned_cols=78 Identities=22% Similarity=0.288 Sum_probs=48.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc--CCc-ee--cCCCCCChhHHHHHHHHhc--CCc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--GVT-DF--VNTSEHDRPIQEVIAEMTN--GGV 227 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~--g~~-~v--v~~~~~~~~~~~~i~~~~~--~~~ 227 (341)
+.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++ +.. .. .|..+.+ ...+.+.+... +++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAE-AVEALVDFVAARWGRL 82 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence 568999987 9999999888777898 8888888876544322 22 221 11 2333221 12222222221 379
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|+++.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999998874
No 310
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.04 E-value=0.9 Score=33.02 Aligned_cols=76 Identities=22% Similarity=0.367 Sum_probs=48.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEE-EEcCChhhHHHH-HHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 159 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g---~~~vv-~v~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
+|.|+|+|.+|.+.+.-....| . +|+ +..+++++.+.+ +++++...... ..+.+.+ .|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQE-----ADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHH-----TSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccCC------hHHhhcc-----CCEEEEE
Confidence 4778899999999988888888 5 666 548999887765 55664322201 3333332 7999999
Q ss_pred cCChHHHHHHHHHh
Q 019414 234 TGNIDNMISAFECV 247 (341)
Q Consensus 234 ~g~~~~~~~~~~~l 247 (341)
+-. ..+...++.+
T Consensus 69 v~p-~~~~~v~~~i 81 (96)
T PF03807_consen 69 VKP-QQLPEVLSEI 81 (96)
T ss_dssp S-G-GGHHHHHHHH
T ss_pred ECH-HHHHHHHHHH
Confidence 854 4444444433
No 311
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.02 E-value=0.19 Score=44.07 Aligned_cols=79 Identities=29% Similarity=0.409 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc---eecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT---DFVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~---~vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+.. ...|..+.+ .+.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4678999986 9999999988888999 8888888877655433 22322 123443322 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|.++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999998763
No 312
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.01 E-value=0.18 Score=44.20 Aligned_cols=78 Identities=21% Similarity=0.242 Sum_probs=48.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~i~~~~--~~~ 226 (341)
++.++||+|+ |++|...+..+...|+ +|+.++++++..+..++ .+... ..|..+.+ ...+.+.+.. .++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPA-SVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 3578999986 9999999988888899 78888887754443333 23221 23333321 1222222221 136
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (263)
T PRK08226 83 IDILVNNAG 91 (263)
T ss_pred CCEEEECCC
Confidence 899999887
No 313
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.01 E-value=0.36 Score=43.05 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=64.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-e-ec-CCCCC--ChhHHHHHHHHhcCCccEEE-
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-D-FV-NTSEH--DRPIQEVIAEMTNGGVDRSV- 231 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~-vv-~~~~~--~~~~~~~i~~~~~~~~d~vl- 231 (341)
.+|||+|+|. |-.+-.++|....+++++++-+++=.++++++-.. . .. |++-. -.+..+-+++.. .+||+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~-~~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCE-EKFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCC-CcCCEEEE
Confidence 4899997653 55566788888888999999999999999884321 1 11 11111 001333343332 3799986
Q ss_pred eccCC---------hHHHHHHHHHhcCCCcEEEEE
Q 019414 232 ECTGN---------IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 232 d~~g~---------~~~~~~~~~~l~~~~g~~v~~ 257 (341)
|+... .+-.+.+.++|+++ |.++..
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 55433 45678899999998 998887
No 314
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.00 E-value=0.17 Score=44.94 Aligned_cols=80 Identities=29% Similarity=0.323 Sum_probs=53.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc------eecCCCCCC--hhHHHHHHHH
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAEM 222 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~------~vv~~~~~~--~~~~~~i~~~ 222 (341)
.|..+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+.... .+.+ .+.|....+ ....+...+.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 4677899986 8999999999999999 89999899888654332 2222 233433221 1233333344
Q ss_pred hcCCccEEEeccCC
Q 019414 223 TNGGVDRSVECTGN 236 (341)
Q Consensus 223 ~~~~~d~vld~~g~ 236 (341)
..+++|++++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 45679999987764
No 315
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.00 E-value=0.14 Score=43.56 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=62.1
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
....+++++++||-+|+|. |..+..+++.. . .|++++.+++..+.+++ .+.+.+ +....+ ..+.+. ..
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~~~~--~~ 142 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWKGWP--AY 142 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--cccCCC--cC
Confidence 4567788999999998753 44455566554 3 89999999887665543 344321 111111 110000 11
Q ss_pred CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414 225 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 225 ~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+.||+|+-........+.+.+.|+++ |+++..-
T Consensus 143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 47999875544445667888999998 9887654
No 316
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.99 E-value=0.19 Score=43.92 Aligned_cols=77 Identities=25% Similarity=0.379 Sum_probs=49.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDR 229 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~ 229 (341)
+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +++... ..|..+.+ ...+.+.+... +++|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 568999987 9999999999988999 8888988888765543 333211 22332221 12222222221 36899
Q ss_pred EEeccC
Q 019414 230 SVECTG 235 (341)
Q Consensus 230 vld~~g 235 (341)
++++.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 999876
No 317
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.99 E-value=0.24 Score=38.47 Aligned_cols=95 Identities=19% Similarity=0.310 Sum_probs=55.8
Q ss_pred EEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCh--hh-HHHHHHcCCceecCCCCCChh-H----------------H
Q 019414 160 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSS--KR-FEEAKKFGVTDFVNTSEHDRP-I----------------Q 216 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~--~~-~~~~~~~g~~~vv~~~~~~~~-~----------------~ 216 (341)
|.|+|+ |.+|.-++.+.+... + +|++..... ++ .+.++++.+..++..++...+ + .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 568897 999999999999886 5 666654432 22 334667888776654432100 1 1
Q ss_pred HHHHHHhc-CCccEEEeccCChHHHHHHHHHhcCCCcEEEE
Q 019414 217 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVL 256 (341)
Q Consensus 217 ~~i~~~~~-~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~ 256 (341)
+.+.++.. ..+|+++.++.+...+.-.+..+..+ -++.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEEE
Confidence 11223333 36888888766667777777788764 44433
No 318
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.13 Score=44.90 Aligned_cols=74 Identities=22% Similarity=0.315 Sum_probs=47.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--c-eecCCCCCChhHHHHHHHHh--cCCccE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T-DFVNTSEHDRPIQEVIAEMT--NGGVDR 229 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~i~~~~--~~~~d~ 229 (341)
.+.++||+|+ |++|.+.++.+...|+ .|+.++++.++ +..+. . ...|..+.+ .+.+.+.... .+++|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPD-QVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 4678999987 9999999988888999 88888887665 11222 1 123433321 1222222221 136899
Q ss_pred EEeccC
Q 019414 230 SVECTG 235 (341)
Q Consensus 230 vld~~g 235 (341)
+|++.|
T Consensus 79 vi~~ag 84 (252)
T PRK07856 79 LVNNAG 84 (252)
T ss_pred EEECCC
Confidence 999876
No 319
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.94 E-value=0.38 Score=42.94 Aligned_cols=90 Identities=18% Similarity=0.187 Sum_probs=57.5
Q ss_pred EEEEECCCHHHHHH-HHHHHHcCCCEEEEEcCChhh--HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 159 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~g~~G~~a-~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+|.|+|+|.+|... ..+.+..+.+.+..++.++++ ++..+++|.....+. +...+ + ...+|+||++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll-~--~~dIDaV~iaTp 73 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG------VDGLL-A--NPDIDIVFDATS 73 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHh-c--CCCCCEEEECCC
Confidence 58899999999855 556555567344445555543 456778886543311 22222 1 136999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
...+.+.+..++.. |+.++...
T Consensus 74 ~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 74 AKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred cHHHHHHHHHHHHc--CCEEEECC
Confidence 87777777777776 56665543
No 320
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.94 E-value=0.15 Score=44.71 Aligned_cols=78 Identities=28% Similarity=0.319 Sum_probs=49.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++...+..++ .+.+. ..|..+.+ ...+.+.+... ++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence 3578999987 9999999998888999 88888887543333333 34322 23443321 12223333222 36
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|+++++.|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999886
No 321
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.23 Score=43.83 Aligned_cols=78 Identities=22% Similarity=0.357 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+... .+|..+.+ ++...+.+... +
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYA-AVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 9999999998888999 899988887664332 2223221 23443321 13333333322 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998775
No 322
>PRK08643 acetoin reductase; Validated
Probab=94.92 E-value=0.19 Score=43.93 Aligned_cols=78 Identities=21% Similarity=0.273 Sum_probs=49.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +.+... ..|..+.+ ...+.+.+... ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 457899987 9999999998888999 8888888876654332 223221 23333322 12222222221 36
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|++.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 323
>PRK07574 formate dehydrogenase; Provisional
Probab=94.90 E-value=0.18 Score=47.06 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=55.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+|.|+|.|.+|+..++.++.+|. +|++.+++....+..+++|+... .+ +.+.+ ...|+|+-++.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~---~~----l~ell-----~~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH---VS----FDSLV-----SVCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec---CC----HHHHh-----hcCCEEEEcCC
Confidence 46789999999999999999999999 99999887644444444554211 11 22222 12577766554
Q ss_pred ChH-H---H-HHHHHHhcCCCcEEEEEc
Q 019414 236 NID-N---M-ISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 236 ~~~-~---~-~~~~~~l~~~~g~~v~~g 258 (341)
..+ + + +..+..++++ ..++.++
T Consensus 258 lt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 222 1 1 2345566665 6555554
No 324
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.90 E-value=0.19 Score=45.75 Aligned_cols=78 Identities=22% Similarity=0.345 Sum_probs=49.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC---c-e--ecCCCCCChhHHHHHHHHh--cC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---T-D--FVNTSEHDRPIQEVIAEMT--NG 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~---~-~--vv~~~~~~~~~~~~i~~~~--~~ 225 (341)
.+.++||+|+ |++|..+++.+...|+ +|+.+.+++++.+.+ +++.. . . ..|..+.+ .+.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence 3568999987 9999999988888898 888888888775433 33321 1 1 12333321 1222222221 23
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999877
No 325
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.19 Score=44.08 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=49.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc-----CCc---eecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT---DFVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~---~vv~~~~~~~~~~~~i~~~~~- 224 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++ +.. ...|..+.+ .+...+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA-SVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence 3678999987 9999999998888999 7888888877654332 22 221 122333321 12222322221
Q ss_pred -CCccEEEeccCC
Q 019414 225 -GGVDRSVECTGN 236 (341)
Q Consensus 225 -~~~d~vld~~g~ 236 (341)
+++|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 369999998873
No 326
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.31 Score=42.67 Aligned_cols=77 Identities=27% Similarity=0.406 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCc-ee--cCCCCCChhHHHHHHHHhcCC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DF--VNTSEHDRPIQEVIAEMTNGG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~-~v--v~~~~~~~~~~~~i~~~~~~~ 226 (341)
.+.++||+|+ +++|...++.+...|+ .|+.+++++++.+.+.+ + +.. .. .|..+.+ .+.+.+.. . ++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~-~-g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPE-AREQLAAE-A-GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHH-h-CC
Confidence 3678999987 8999999988888999 89999888776554322 1 221 11 2333221 12222222 1 47
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998773
No 327
>PLN02253 xanthoxin dehydrogenase
Probab=94.89 E-value=0.17 Score=44.87 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=48.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC--c-e--ecCCCCCChhHHHHHHHHhc--CCc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV--T-D--FVNTSEHDRPIQEVIAEMTN--GGV 227 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~--~-~--vv~~~~~~~~~~~~i~~~~~--~~~ 227 (341)
+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. .++++. . . ..|..+.+ .+.+.+..... +++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCCC
Confidence 578999986 9999999888888899 88888877665443 333322 1 1 23333322 12222222222 369
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|+++++.|.
T Consensus 96 d~li~~Ag~ 104 (280)
T PLN02253 96 DIMVNNAGL 104 (280)
T ss_pred CEEEECCCc
Confidence 999998763
No 328
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.23 Score=43.45 Aligned_cols=78 Identities=22% Similarity=0.339 Sum_probs=48.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC---Cce-ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VTD-FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g---~~~-vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +++. +.. ..|..+.+ .+...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence 457999987 9999999888888898 788888887775543 3332 111 12333221 12222322221 3689
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99998874
No 329
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.86 E-value=0.27 Score=44.16 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
.+.+++|+|+|++|.+++..+...|+++|+.+.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999988888889997798888885
No 330
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.86 E-value=0.48 Score=42.17 Aligned_cols=131 Identities=19% Similarity=0.160 Sum_probs=84.9
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC---------ChhHHHHHHHH
Q 019414 152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAEM 222 (341)
Q Consensus 152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~---------~~~~~~~i~~~ 222 (341)
+.-.++..+++.|.|..|++++..++.+|+ .|..-+-...+.+..+++|+..+-...+. +.+|..+-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 344567889999999999999999999999 88888778888888888887543211111 12344333333
Q ss_pred hc---CCccEEEeccC--C---hH-HHHHHHHHhcCCCcEEEEEccCCC-Ccccccc-cceeeecceEEEeee
Q 019414 223 TN---GGVDRSVECTG--N---ID-NMISAFECVHDGWGVAVLVGVPSK-DAVFMTK-PINVLNERTLKGTFF 284 (341)
Q Consensus 223 ~~---~~~d~vld~~g--~---~~-~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~-~~~~~~~~~~~g~~~ 284 (341)
.. .++|+||-+.= + |. .........+|+ +.+|.+....+ +....-. .....+++++.|...
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 32 27999997532 2 22 245677889997 99999865322 2222211 223457888887653
No 331
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.86 E-value=0.12 Score=45.87 Aligned_cols=78 Identities=22% Similarity=0.285 Sum_probs=51.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH----HHHHHcC-C-ceecCCCCCCh--hHHHHHHHHhcCC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF----EEAKKFG-V-TDFVNTSEHDR--PIQEVIAEMTNGG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~----~~~~~~g-~-~~vv~~~~~~~--~~~~~i~~~~~~~ 226 (341)
.|+.|||+|+ +++|++.++=...+|+ +++..+.+.+.. +.+++.| + ..++|-++.++ ...+++++.. |.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GD 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 6899999986 8999998777777888 888887776543 3344444 2 24566655431 1333333332 27
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|++++.+|
T Consensus 115 V~ILVNNAG 123 (300)
T KOG1201|consen 115 VDILVNNAG 123 (300)
T ss_pred ceEEEeccc
Confidence 999999877
No 332
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.21 Score=44.17 Aligned_cols=77 Identities=22% Similarity=0.423 Sum_probs=49.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---C--Cc-ee--cCCCCCChhHHHHHHHHhc--
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---G--VT-DF--VNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g--~~-~v--v~~~~~~~~~~~~i~~~~~-- 224 (341)
+.++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.. +++ + .. .+ .|..+.+ .+.+.+.+...
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDED-QVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 578999987 9999999999998999 888888887664432 222 1 11 11 2333322 13333333322
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|++|++.|
T Consensus 85 ~~~d~li~~ag 95 (276)
T PRK05875 85 GRLHGVVHCAG 95 (276)
T ss_pred CCCCEEEECCC
Confidence 36899999886
No 333
>PRK06128 oxidoreductase; Provisional
Probab=94.85 E-value=0.47 Score=42.73 Aligned_cols=78 Identities=18% Similarity=0.206 Sum_probs=46.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh------HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR------FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~------~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~- 224 (341)
.+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+. .+.+++.+... ..|..+.+ .+.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA-FCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHHHHHH
Confidence 4678999987 9999999988888999 67766544321 22334444322 12333321 12222222221
Q ss_pred -CCccEEEeccC
Q 019414 225 -GGVDRSVECTG 235 (341)
Q Consensus 225 -~~~d~vld~~g 235 (341)
+++|++|++.|
T Consensus 132 ~g~iD~lV~nAg 143 (300)
T PRK06128 132 LGGLDILVNIAG 143 (300)
T ss_pred hCCCCEEEECCc
Confidence 36999999877
No 334
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.21 Score=43.65 Aligned_cols=72 Identities=22% Similarity=0.337 Sum_probs=45.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
+.++||+|+ |++|.+.++.+...|+ +|+.+++++ ++.+... .+... ..|..+. +.+.+.. +++|++|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~-----~~~~~~~-~~iDilVn 85 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGKE-----ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCCH-----HHHHHhc-CCCCEEEE
Confidence 578999987 9999999998888999 888887775 2222211 11111 2233221 1223322 36999999
Q ss_pred ccCC
Q 019414 233 CTGN 236 (341)
Q Consensus 233 ~~g~ 236 (341)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 8874
No 335
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.21 Score=43.50 Aligned_cols=77 Identities=22% Similarity=0.254 Sum_probs=48.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+. +.+... .+|..+.+ ...+.+.+... ++
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME-QIDALFAHIRERHGR 85 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 467999986 9999999999988999 8999988876654332 223221 12333321 12222322222 36
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|+++++.|
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 899998876
No 336
>PRK09186 flagellin modification protein A; Provisional
Probab=94.82 E-value=0.2 Score=43.71 Aligned_cols=78 Identities=19% Similarity=0.418 Sum_probs=49.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc----CCc---e-ecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVT---D-FVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~----g~~---~-vv~~~~~~~~~~~~i~~~~~- 224 (341)
++.++||+|+ |++|...+..+...|+ +|+.+.+++++.+.+ +++ +.. . ..|..+.+ .+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence 4678999987 9999999999988999 788888887765433 222 221 1 22443322 13233333222
Q ss_pred -CCccEEEeccC
Q 019414 225 -GGVDRSVECTG 235 (341)
Q Consensus 225 -~~~d~vld~~g 235 (341)
+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
No 337
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.82 E-value=0.2 Score=43.76 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=49.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHh--cCCc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGV 227 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~~~ 227 (341)
.+.++||+|+ +++|.+.++.+...|+ +|+.+.+++.. .+.+++.+... .+|..+.+ .+.+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4678999987 9999999998888999 78777665422 23344455322 23443322 1222233221 1369
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998773
No 338
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.82 E-value=0.055 Score=45.92 Aligned_cols=101 Identities=24% Similarity=0.286 Sum_probs=65.2
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc----
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---- 224 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~---- 224 (341)
.....+||-+|++ +|..++.+|+.+. -.+|++++.++++.+.+++ .|...-+.....+ ..+.+.++..
T Consensus 43 ~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTTTT
T ss_pred hcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhccCC
Confidence 3445689999874 4778888888763 1399999999999877754 5553322222232 4444444432
Q ss_pred CCccEEE-eccC--ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 225 GGVDRSV-ECTG--NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 225 ~~~d~vl-d~~g--~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+.||.|| |+-= ....++.++++++++ |.++.=+
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699997 6531 234577889999997 8777654
No 339
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.80 E-value=0.28 Score=42.90 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
...+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 347899999999999999999999998888887643
No 340
>PRK05717 oxidoreductase; Validated
Probab=94.80 E-value=0.23 Score=43.38 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
.|.++||+|+ |.+|..++..+...|+ +|+.++++.++.+. .++++... ..|..+.+ ...+.+.+... +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEA-QVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4678999986 9999999888888898 88888777665443 34444321 23333322 12222333222 3689
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
++|++.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998773
No 341
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.25 Score=43.77 Aligned_cols=77 Identities=17% Similarity=0.257 Sum_probs=49.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---e--ecCCCCCChhHHHHHHHHhc--
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---D--FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~---~--vv~~~~~~~~~~~~i~~~~~-- 224 (341)
+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+.. . ..|..+.+ .+.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQN-SIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHH-HHHH-HHHHHHhc
Confidence 457899987 9999999988888899 88888888776544322 2221 1 22443322 1332 333322
Q ss_pred CCccEEEeccCC
Q 019414 225 GGVDRSVECTGN 236 (341)
Q Consensus 225 ~~~d~vld~~g~ 236 (341)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 368999998763
No 342
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.79 E-value=0.14 Score=40.18 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=29.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
..+|+|.|+|++|...+..+-..|..+++.++.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999999999899998899887654
No 343
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.32 Score=41.46 Aligned_cols=72 Identities=22% Similarity=0.289 Sum_probs=45.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c-CCce-ecCCCCCChhHHHHHHHHhcC--CccEEE
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-GVTD-FVNTSEHDRPIQEVIAEMTNG--GVDRSV 231 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~-g~~~-vv~~~~~~~~~~~~i~~~~~~--~~d~vl 231 (341)
.++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ . +... ..|..+. +.+.+...+ ++|.+|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP-----EAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH-----HHHHHHHHhcCCCCEEE
Confidence 47899987 99999988777666 6 78999888776554442 2 2211 1223221 223332222 699999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
.+.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 98874
No 344
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.78 E-value=0.28 Score=43.80 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=55.6
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 155 ERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 155 ~~g~~vlI~G~g~-~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
-.|.+++|+|.|+ +|...++++...|+ .|+.+.+..+. +.+.+ ..+|+++.+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEEc
Confidence 4788999999976 99999999999999 88877542111 11111 248999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+|.+..+.. +.++++ ..++.++...
T Consensus 210 tG~~~~v~~--~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 210 VGKPELIKK--DWIKQG-AVVVDAGFHP 234 (283)
T ss_pred cCCCCcCCH--HHcCCC-CEEEEEEEee
Confidence 987664443 458887 8888888643
No 345
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.21 Score=43.27 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=46.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--c-eecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+. . ...|..+.+ ++.+.+.+. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDHP-GTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHH-HHHHHHHhc-ccCCCEEEEc
Confidence 46899986 9999998888888899 89999999888776655332 1 123443322 233333332 2245666655
Q ss_pred cC
Q 019414 234 TG 235 (341)
Q Consensus 234 ~g 235 (341)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 346
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.77 E-value=0.26 Score=43.20 Aligned_cols=76 Identities=26% Similarity=0.405 Sum_probs=47.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCcee--cCCCCCChhHHHHHHHHhc--CCccE
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDR 229 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v--v~~~~~~~~~~~~i~~~~~--~~~d~ 229 (341)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+.... .|..+.+ .+.+.+.+... +++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~-~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKD-DLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHH-HHHHHHHHHHHhcCCCCE
Confidence 5899987 9999999988888899 8888888877654332 2231112 2333321 12222332222 37999
Q ss_pred EEeccCC
Q 019414 230 SVECTGN 236 (341)
Q Consensus 230 vld~~g~ 236 (341)
+|++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998773
No 347
>PLN03075 nicotianamine synthase; Provisional
Probab=94.76 E-value=0.24 Score=44.34 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=66.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcC-----CceecCCCCCChhHHHHHHHHh-cCCcc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMT-NGGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~i~~~~-~~~~d 228 (341)
+.++|+-+|+|+.++.++.+++.+ ...+++.++.+++..+.+++.- ...-+.+...| ..+. .. .++||
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~---~~~l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDV---TESLKEYD 197 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhc---ccccCCcC
Confidence 778999999999999888888654 3348999999999988877643 22222222222 2211 11 24799
Q ss_pred EEEecc-------CChHHHHHHHHHhcCCCcEEEEEc
Q 019414 229 RSVECT-------GNIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 229 ~vld~~-------g~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+||-.+ .-.+.++...+.++|+ |.++.-.
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 998543 1234688999999997 8887665
No 348
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.76 E-value=0.23 Score=43.44 Aligned_cols=78 Identities=17% Similarity=0.263 Sum_probs=48.4
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce----ecCCCCCCh--hHHHHHHHHhcCC
Q 019414 156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDR--PIQEVIAEMTNGG 226 (341)
Q Consensus 156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~~--~~~~~i~~~~~~~ 226 (341)
.+.++||+|+ +++|.+.++-+...|+ +|+.+.++++..+.++++.... .+|..+.+. .+.+.+.+.. +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 4678999986 3899999888888999 7888877754444444442211 234433220 1222232222 46
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|+++++.|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999876
No 349
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.74 E-value=0.24 Score=43.95 Aligned_cols=93 Identities=22% Similarity=0.199 Sum_probs=57.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC---ceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~---~~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
..+.+++|+|+|++|.+++..+...|. +|+.+.++.++.+. ++++.. ...+. ..+ ......|+|
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Div 182 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDLI 182 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccEE
Confidence 457789999999999999888888898 88888888777544 333321 11111 111 111358999
Q ss_pred EeccCChH--HH---HHHHHHhcCCCcEEEEEccC
Q 019414 231 VECTGNID--NM---ISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 231 ld~~g~~~--~~---~~~~~~l~~~~g~~v~~g~~ 260 (341)
|+|++... .. ......+.++ ..++.+...
T Consensus 183 Inatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~ 216 (270)
T TIGR00507 183 INATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN 216 (270)
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence 99987521 11 1113445665 666666543
No 350
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.74 E-value=0.31 Score=41.91 Aligned_cols=97 Identities=25% Similarity=0.309 Sum_probs=62.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
-+|-+||=+|+|+ |+++..+|+ .|+ .|++++.+++..+.++.-.... -+++... ..+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhc-CCCccEEEE
Confidence 4788899999754 566666665 457 9999999999999887432221 2445432 22222221 148999974
Q ss_pred -----ccCChH-HHHHHHHHhcCCCcEEEEEcc
Q 019414 233 -----CTGNID-NMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 233 -----~~g~~~-~~~~~~~~l~~~~g~~v~~g~ 259 (341)
-+..++ .+..+.+.++|+ |.+.+.-.
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi 162 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLSTI 162 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence 233333 466789999997 88776643
No 351
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.23 Score=43.06 Aligned_cols=77 Identities=27% Similarity=0.459 Sum_probs=48.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c--CCce---ecCCCCCChhHHHHHHHHhc--
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD---FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~--g~~~---vv~~~~~~~~~~~~i~~~~~-- 224 (341)
+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ . +... ..|..+.+ .+.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHD-QVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 457999987 9999998888878898 88888888877654322 1 2211 23444322 23333333222
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|++|++.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 36999999876
No 352
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.70 E-value=0.22 Score=43.74 Aligned_cols=100 Identities=22% Similarity=0.211 Sum_probs=65.4
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV 227 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~ 227 (341)
.....+.++++||=+|+|. |..+..+++..+..+|++++.+++..+.+++.-.. .++. .+ .. .+ ...+.+
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~---~d--~~-~~--~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE---AD--IA-SW--QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE---Cc--hh-cc--CCCCCc
Confidence 3445677889999998753 66677888776444999999999988887764321 1111 11 11 01 112379
Q ss_pred cEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEc
Q 019414 228 DRSVECTG-----N-IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 228 d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g 258 (341)
|+|+-... . ...+..+.+.|+++ |+++...
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 99874322 1 34688899999998 9988753
No 353
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.68 E-value=0.2 Score=43.61 Aligned_cols=77 Identities=25% Similarity=0.326 Sum_probs=48.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCCc---eecCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT---DFVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~---~vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+.. ...|..+.+ .+.+.+..... ++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEE-AINAGIDYAVETFGG 81 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 568999986 9999999888888899 8888888877654332 2 2322 122333222 12222222211 36
Q ss_pred ccEEEeccC
Q 019414 227 VDRSVECTG 235 (341)
Q Consensus 227 ~d~vld~~g 235 (341)
+|++|.+.+
T Consensus 82 ~d~vi~~a~ 90 (258)
T PRK12429 82 VDILVNNAG 90 (258)
T ss_pred CCEEEECCC
Confidence 999999876
No 354
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.68 E-value=0.49 Score=41.55 Aligned_cols=96 Identities=23% Similarity=0.241 Sum_probs=66.9
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh-cCC
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGG 226 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~-~~~ 226 (341)
.......++++||=+|+|. |..+..+++.. +. +|++++.++...+.+++.+.+.+. .+ .. ++. .+.
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~----~~~~~~~ 89 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VR----DWKPKPD 89 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hh----hCCCCCC
Confidence 4455667889999998764 66777777775 45 899999999998888876654322 11 21 112 237
Q ss_pred ccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEE
Q 019414 227 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 227 ~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~ 257 (341)
||+|+-... . ...+..+.+.|+|+ |++++.
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999985321 2 34678899999998 998875
No 355
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.67 E-value=0.3 Score=42.69 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=65.0
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHh---
Q 019414 152 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT--- 223 (341)
Q Consensus 152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~--- 223 (341)
.+.....+||-+|+ .+|..++.+|+.++ -.++++++.++++.+.++ +.|...-+.....+ ..+.+.++.
T Consensus 75 ~~~~~ak~iLEiGT-~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~~ 151 (247)
T PLN02589 75 LKLINAKNTMEIGV-YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIEDG 151 (247)
T ss_pred HHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhcc
Confidence 34445568888887 35777788888763 138999999998877664 45643322222233 445554443
Q ss_pred --cCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEE
Q 019414 224 --NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVL 256 (341)
Q Consensus 224 --~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~ 256 (341)
.+.||.|| |+- .....++.++++++++ |.++.
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 24799997 442 1234677889999997 87665
No 356
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.27 Score=42.95 Aligned_cols=79 Identities=20% Similarity=0.271 Sum_probs=48.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHH---HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEE---AKKFGVTD---FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~---~~~~g~~~---vv~~~~~~~~~~~~i~~~~~-- 224 (341)
.+.++||+|+ +++|.+.++-+...|+ +|+.+++++++ .+. ++..+... ..|..+.+ ...+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA-DLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 3568999986 9999999999888999 78888776432 222 23334321 22333322 12222332221
Q ss_pred CCccEEEeccCC
Q 019414 225 GGVDRSVECTGN 236 (341)
Q Consensus 225 ~~~d~vld~~g~ 236 (341)
+++|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 357
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.23 Score=44.11 Aligned_cols=78 Identities=21% Similarity=0.305 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ +..+... ..|..+.+ .+.+.+.+... +
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence 3568999986 9999999998888999 788888887665432 2234322 23333322 12222222211 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|++.|
T Consensus 83 ~id~li~nAg 92 (275)
T PRK05876 83 HVDVVFSNAG 92 (275)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 358
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.23 Score=44.85 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=48.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCce---ecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVTD---FVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~~---vv~~~~~~~~~~~~i~~~~~- 224 (341)
.+.++||+|+ |++|.++++.+...|+ +|+.+.++.++.+.+ +++ +... .+|..+.+ ...+.+.+...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLA-SVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHH-HHHHHHHHHHhh
Confidence 4678999987 9999999888888898 788888887664432 111 1111 23333322 12222333222
Q ss_pred -CCccEEEeccC
Q 019414 225 -GGVDRSVECTG 235 (341)
Q Consensus 225 -~~~d~vld~~g 235 (341)
+++|++|++.|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 36999999886
No 359
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.17 Score=43.43 Aligned_cols=73 Identities=23% Similarity=0.263 Sum_probs=47.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 233 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~ 233 (341)
+.++||+|+ |.+|...++.+...|+ +|+.+.++.++. .... ...|..+.+ .+.+.+.+.... +.|++|.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLADIE-QTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEEC
Confidence 567999987 9999999998888998 888888876541 1111 122333322 133333333333 68999998
Q ss_pred cCC
Q 019414 234 TGN 236 (341)
Q Consensus 234 ~g~ 236 (341)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 774
No 360
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.65 E-value=0.25 Score=43.85 Aligned_cols=78 Identities=21% Similarity=0.331 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.+++|+|+ |++|++.+..+...|+ +|+.+++++++.+.+ + +.+... ..|..+.+ .+...+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKE-SLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 9999999998888999 888888877654432 2 223321 23333321 12222222222 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|++.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999877
No 361
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.64 E-value=0.31 Score=42.64 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=47.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H----cCCc--ee--cCCCCCChhHHHHHHHHhc--
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K----FGVT--DF--VNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~----~g~~--~v--v~~~~~~~~~~~~i~~~~~-- 224 (341)
+.++||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+. + .+.. .. .|..+.+ .....+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQ-SVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHH-HHHHHHHHHHHHc
Confidence 457999987 9999999988888899 8888888876554332 1 2211 11 2333221 12222222221
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 80 ~~id~vv~~ag 90 (259)
T PRK12384 80 GRVDLLVYNAG 90 (259)
T ss_pred CCCCEEEECCC
Confidence 37899999886
No 362
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.62 E-value=0.3 Score=42.66 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=50.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... ..|..+.+ .+...+.+... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEE-AVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence 4778999987 9999999888888899 889998887664432 2334211 22333321 12222332222 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|.++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998774
No 363
>PRK09242 tropinone reductase; Provisional
Probab=94.62 E-value=0.24 Score=43.31 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c--CCce---ecCCCCCChhHHHHHHHHh--
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD---FVNTSEHDRPIQEVIAEMT-- 223 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~--g~~~---vv~~~~~~~~~~~~i~~~~-- 223 (341)
.+.++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+.+ . +... ..|..+.+ ...+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 3678999987 9999999999988999 88888888776544322 1 2211 23433322 1222222221
Q ss_pred cCCccEEEeccCC
Q 019414 224 NGGVDRSVECTGN 236 (341)
Q Consensus 224 ~~~~d~vld~~g~ 236 (341)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 1379999999874
No 364
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.62 E-value=0.43 Score=41.24 Aligned_cols=34 Identities=35% Similarity=0.416 Sum_probs=29.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
..+|+|+|+|++|...+..+-..|..+++.++.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4689999999999999999999999888888654
No 365
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.61 E-value=0.2 Score=46.77 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999887
No 366
>PRK08328 hypothetical protein; Provisional
Probab=94.60 E-value=0.3 Score=42.34 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=30.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
+.+|+|+|+|++|..++..+-..|.++++.++.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4679999999999999999999999888888754
No 367
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.60 E-value=0.29 Score=42.30 Aligned_cols=79 Identities=23% Similarity=0.269 Sum_probs=49.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-e--cCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
++.++||+|+ |.+|...+..+...|+ .|+...++.++.+.+ .+++... + .|..+.+ .+.+.+.+... +++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRD-EVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence 3568999987 9999999888888898 788887777665543 3343321 1 2332221 12222222211 3699
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
.+|++.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998873
No 368
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.34 Score=41.96 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=32.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~ 196 (341)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 46899986 9999999998888898 89999888876543
No 369
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.58 E-value=0.25 Score=40.71 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=29.1
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
+|+|+|+|++|...++.+-..|..+++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999988889998899988765
No 370
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.57 E-value=0.33 Score=46.19 Aligned_cols=104 Identities=13% Similarity=0.227 Sum_probs=63.6
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce-e--cCCCCCChhHHHHHHHH
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~i~~~ 222 (341)
....+++|++||=+|+|+ |-.++.+++..+..+|++++.++++.+.++ .+|.+. + .+.+..+ .. .. .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~--~~-~~--~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG--PS-QW--A 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc--cc-cc--c
Confidence 445788999999887643 334445555444339999999999977654 456642 2 2211111 00 00 0
Q ss_pred hcCCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414 223 TNGGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 223 ~~~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
..+.||.|| | |+|. .+.+..+++.++|+ |+++.....
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs 370 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS 370 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 123699987 5 4442 13677789999998 999877543
No 371
>PRK06398 aldose dehydrogenase; Validated
Probab=94.56 E-value=0.15 Score=44.81 Aligned_cols=73 Identities=21% Similarity=0.296 Sum_probs=46.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~--~~~d~vl 231 (341)
.|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.. ... ...|..+.+ .+.+.+.+... +++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 3678999987 9999999999989999 8888877765432 111 123443322 13333333222 3699999
Q ss_pred eccC
Q 019414 232 ECTG 235 (341)
Q Consensus 232 d~~g 235 (341)
++.|
T Consensus 78 ~~Ag 81 (258)
T PRK06398 78 NNAG 81 (258)
T ss_pred ECCC
Confidence 9876
No 372
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.54 E-value=1.6 Score=37.42 Aligned_cols=115 Identities=10% Similarity=0.036 Sum_probs=64.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.+.+|||+|+|.++.-=+..+...|+ .|.+++..-. ....+.+.|.-..+ ..+.+ ..- + .++++||-|+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~----~~d--l--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYD----KEF--I--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCC----hHH--h--CCCcEEEECC
Confidence 46689999999999887888888898 7777754321 22222222321122 11111 110 1 3689999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeee-cceEEEe
Q 019414 235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLN-ERTLKGT 282 (341)
Q Consensus 235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~ 282 (341)
+.++.-+++....... +.++..........+.++ ..+.+ .+++.-+
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~P-Aiv~rg~l~IaIS 140 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIP-YQRSTKNFVFALN 140 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEee-eEEecCCEEEEEE
Confidence 8866666666666664 666665543333333332 22333 4555433
No 373
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.53 E-value=1.2 Score=33.72 Aligned_cols=88 Identities=23% Similarity=0.342 Sum_probs=60.1
Q ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 159 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+|.|+|.|..|.....-++.. +...+.++++++++.+. .+++|.. .+ .+ +.+.+.. ..+|+|+.++.
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~tp 71 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIATP 71 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEecC
Confidence 588999999998887666655 45344466667766665 5667776 32 22 3333222 26999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 236 NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.....+.+..++.. |+-+++.
T Consensus 72 ~~~h~~~~~~~l~~--g~~v~~E 92 (120)
T PF01408_consen 72 PSSHAEIAKKALEA--GKHVLVE 92 (120)
T ss_dssp GGGHHHHHHHHHHT--TSEEEEE
T ss_pred CcchHHHHHHHHHc--CCEEEEE
Confidence 87888888888887 5566665
No 374
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.53 E-value=0.28 Score=43.16 Aligned_cols=78 Identities=15% Similarity=0.219 Sum_probs=46.6
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce--ecCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vv~~~~~~~~~~~~i~~~~~-- 224 (341)
.|..+||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ ++.|... .+|..+.+ ...+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence 4577899987 4 799999888888899 777777764322222 2334322 23444432 12222333222
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 36999998776
No 375
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.52 E-value=0.28 Score=42.35 Aligned_cols=78 Identities=19% Similarity=0.356 Sum_probs=48.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.+++|+|+ |++|...+..+...|+ .|+.++++.++.+.. +..+... ..|..+.+ .+.+.+++... ++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYE-EVTAAIEQLKNELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 567999987 9999999988888999 888888887664432 2223221 12332221 13333333222 37
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|.+|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998764
No 376
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.52 E-value=0.35 Score=39.01 Aligned_cols=77 Identities=27% Similarity=0.330 Sum_probs=47.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHH-H---HHHcCCce-e--cCCCCCChhHHHHHHHHh--cCC
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFE-E---AKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~--~~~~~-~---~~~~g~~~-v--v~~~~~~~~~~~~i~~~~--~~~ 226 (341)
++||+|+ +++|...++.+...|..+|+.+.++ .++.+ + ++..+... + .|..+.+ .+...+.+.. .+.
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPE-SIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHH-HHHHHHHHHHHHHSS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccc-ccccccccccccccc
Confidence 6899987 9999998888877777688888888 34333 2 23345322 1 2222221 1333333332 237
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998874
No 377
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.51 E-value=0.83 Score=39.96 Aligned_cols=99 Identities=14% Similarity=0.226 Sum_probs=63.1
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
....++.+||-+|+|. |..+..+++ .|. .|++++.+++..+.+++.... ..+..+ +.. + ...++.||+|
T Consensus 38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d-----~~~-~-~~~~~~fD~V 107 (251)
T PRK10258 38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGD-----IES-L-PLATATFDLA 107 (251)
T ss_pred cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcC-----ccc-C-cCCCCcEEEE
Confidence 3445678899998764 555555554 466 999999999999888875432 111111 100 0 1122369999
Q ss_pred EeccC------ChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 231 VECTG------NIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 231 ld~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+.... -...+.++.+.|+|+ |.++......
T Consensus 108 ~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~~ 143 (251)
T PRK10258 108 WSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLVQ 143 (251)
T ss_pred EECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCCC
Confidence 85321 124688899999998 9998875443
No 378
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.51 E-value=0.12 Score=47.68 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=46.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcC----Cc-eecCCCCCChhHHHHHHHHhcC-Cc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFG----VT-DFVNTSEHDRPIQEVIAEMTNG-GV 227 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g----~~-~vv~~~~~~~~~~~~i~~~~~~-~~ 227 (341)
+|.+|||+|+ |.+|...++.+...|. +|++++++...... .+.++ .. ...|..+. +.+.+...+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-----AKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-----HHHHHHHhhcCC
Confidence 3678999986 9999999999999998 78888776654322 12222 11 11222221 223333333 68
Q ss_pred cEEEeccC
Q 019414 228 DRSVECTG 235 (341)
Q Consensus 228 d~vld~~g 235 (341)
|+||++.+
T Consensus 77 d~vih~A~ 84 (349)
T TIGR02622 77 EIVFHLAA 84 (349)
T ss_pred CEEEECCc
Confidence 99999887
No 379
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.49 E-value=0.35 Score=42.98 Aligned_cols=97 Identities=22% Similarity=0.191 Sum_probs=59.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eec-----CCCCCChhHHHHHHHHhcCCccE
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFV-----NTSEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv-----~~~~~~~~~~~~i~~~~~~~~d~ 229 (341)
..+||++|+|. |..+..+++.....++++++.+++-.+.+++.-.. ..+ +....+ ..+.+++ ..+.+|+
T Consensus 73 p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D--~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 73 PKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDD--GFKFLAD-TENTFDV 148 (270)
T ss_pred CCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECc--hHHHHHh-CCCCccE
Confidence 45999998754 44555666666566899999998887777763110 000 000111 2233332 2458999
Q ss_pred EE-ecc---C------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 230 SV-ECT---G------NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 230 vl-d~~---g------~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
|+ |.. + ..+.++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 87 432 1 124567888999998 9998763
No 380
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.47 E-value=0.36 Score=46.66 Aligned_cols=69 Identities=29% Similarity=0.316 Sum_probs=47.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-----~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
.+.+|+|+|+|.+|+.++..++..|+ .|++++.++. ..+.+++.|+......... ....+|.|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence 46789999999999999999999999 7888875542 2344666777544322110 01257888
Q ss_pred EeccCC
Q 019414 231 VECTGN 236 (341)
Q Consensus 231 ld~~g~ 236 (341)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 877764
No 381
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.47 E-value=0.33 Score=42.08 Aligned_cols=78 Identities=22% Similarity=0.309 Sum_probs=49.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-ee--cCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DF--VNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~v--v~~~~~~~~~~~~i~~~~~--~ 225 (341)
++.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+. +.+.. .+ .|..+.+ .+.+.+.+... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRD-SVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 3678999987 9999999998888999 8888888876654332 22321 12 2322221 12222332221 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999886
No 382
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.29 Score=43.32 Aligned_cols=78 Identities=17% Similarity=0.268 Sum_probs=49.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc-ee--cCCCCCChhHHHHHHHHhc--CCccE
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVDR 229 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~v--v~~~~~~~~~~~~i~~~~~--~~~d~ 229 (341)
+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. .. .|..+.+ .+.+.+..... +++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRA-AVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 357899987 9999999888888898 88888888877665444 2221 11 2332221 12222222211 37899
Q ss_pred EEeccCC
Q 019414 230 SVECTGN 236 (341)
Q Consensus 230 vld~~g~ 236 (341)
++.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 383
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.46 E-value=0.22 Score=45.13 Aligned_cols=93 Identities=17% Similarity=0.105 Sum_probs=63.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHH-HHHcC---CceecCCCCCChhHHHHHHHHhcCCccE
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEE-AKKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~-~~g~~~vv~v~~~~~~~~~-~~~~g---~~~vv~~~~~~~~~~~~i~~~~~~~~d~ 229 (341)
....+++|+|+|..|.+.++.+. ..+.++|.+..++.++.+. ++++. .... . .+ ..+.+ ...|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence 45578999999999999888776 4687899999999888654 44443 2211 1 11 33333 25899
Q ss_pred EEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
|+.|+.+++.+-..| ++|+ -++..+|...
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFT 220 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence 999988765443333 6886 8888888654
No 384
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.46 E-value=0.29 Score=48.33 Aligned_cols=75 Identities=17% Similarity=0.242 Sum_probs=55.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- +..+ .+.+++..-+.+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhcCccccCEEEEEcCCh
Confidence 689999999999999999999998 8999999999999999988765442 2222 1223332223688887776653
No 385
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.43 E-value=0.34 Score=42.29 Aligned_cols=79 Identities=24% Similarity=0.367 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ . ..+... . .|..+.+ .+.+.+..... +
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ-EVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHH-HHHHHHHHHHHhcC
Confidence 3568999987 9999999988888898 888888887664432 2 223221 1 2333322 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 386
>PLN02244 tocopherol O-methyltransferase
Probab=94.42 E-value=0.23 Score=45.78 Aligned_cols=98 Identities=20% Similarity=0.233 Sum_probs=62.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
+++++||=+|+|. |..+..+++..|+ .|++++.++...+.+++. +...-+.....+ ..+ ....++.||+|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~--~~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN--QPFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc--CCCCCCCccEE
Confidence 6889999898753 5567788887788 999999999877766542 331101111111 100 01123479999
Q ss_pred EeccC-----C-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 231 VECTG-----N-IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 231 ld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
+-... . ...++++.+.|+|+ |++++...
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 75322 1 24678899999998 99988754
No 387
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.40 E-value=0.34 Score=43.21 Aligned_cols=79 Identities=27% Similarity=0.360 Sum_probs=58.4
Q ss_pred CCCCEEEEECC-CHHHHH-HHHHHHHcCCCEEEEEcCChhhHHHHH-----HcCCc---eecCCCCCChhHHHHHHHHhc
Q 019414 155 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVT---DFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 155 ~~g~~vlI~G~-g~~G~~-a~~la~~~g~~~vv~v~~~~~~~~~~~-----~~g~~---~vv~~~~~~~~~~~~i~~~~~ 224 (341)
+-|++.+|.|+ .++|.+ +-++|| .|. .|+-+.|+++|++.++ +.++. .++|+.+.+. .-+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 34678888997 799977 566666 999 7999999999987654 34542 3578877764 4566666666
Q ss_pred C-CccEEEeccCC
Q 019414 225 G-GVDRSVECTGN 236 (341)
Q Consensus 225 ~-~~d~vld~~g~ 236 (341)
+ .+-+.++++|-
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6 78888999884
No 388
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.40 E-value=0.3 Score=37.79 Aligned_cols=92 Identities=24% Similarity=0.339 Sum_probs=51.0
Q ss_pred EEEEECC-CHHHHHHHHHHHH-cCCCEEEEEcCChh---hHHHHHHcCCc--eecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 159 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK---RFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~-~g~~~vv~v~~~~~---~~~~~~~~g~~--~vv~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
+|+|+|+ |-+|.+.++.+.. .+.+-+-+++++++ ..+.-.-.|.. .+..+ ..+.+.... .|+++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~--------~~l~~~~~~-~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT--------DDLEELLEE-ADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB--------S-HHHHTTH--SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc--------hhHHHhccc-CCEEE
Confidence 5889998 9999999999987 57755556655551 11111112211 11101 112223222 89999
Q ss_pred eccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 232 ECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
|++ .++.....++.+... |.-+.+|...
T Consensus 73 DfT-~p~~~~~~~~~~~~~-g~~~ViGTTG 100 (124)
T PF01113_consen 73 DFT-NPDAVYDNLEYALKH-GVPLVIGTTG 100 (124)
T ss_dssp EES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred EcC-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence 998 556665555555555 7777776644
No 389
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.39 E-value=0.22 Score=41.53 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=63.4
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
+....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ .+...+- ....+ ... ...
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~~----~~~ 95 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--API----ELP 95 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--chh----hcC
Confidence 3455677889998888754 6666677776543499999999988776654 3332211 11111 111 112
Q ss_pred CCccEEEeccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 225 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 225 ~~~d~vld~~g---~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+.+|+|+.... -...++.+.+.|+++ |+++...
T Consensus 96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 36999985321 124677889999998 9987753
No 390
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.38 E-value=0.028 Score=45.08 Aligned_cols=94 Identities=21% Similarity=0.204 Sum_probs=55.3
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC----ChhHHHHHHHHhcCCccEEEeccC
Q 019414 160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~----~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
|+|+|+|++|...+..++..|. .|..+.+++ +.+.+++.|........+. ....... ....+.+|++|-|+=
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877898 888888888 7777777665322111000 0000000 112247999999985
Q ss_pred ChH---HHHHHHHHhcCCCcEEEEEc
Q 019414 236 NID---NMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 236 ~~~---~~~~~~~~l~~~~g~~v~~g 258 (341)
+.. .++.+...+.++ ..++.+.
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEES
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEe
Confidence 422 333344444454 5666554
No 391
>PLN03139 formate dehydrogenase; Provisional
Probab=94.37 E-value=0.25 Score=46.12 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=37.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~ 202 (341)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57799999999999999999999999 88888877544444455554
No 392
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.37 E-value=0.3 Score=42.33 Aligned_cols=78 Identities=23% Similarity=0.268 Sum_probs=47.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce-e--cCCCCCChhHHHHHHHHhc--CC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~ 226 (341)
+.++||+|+ |.+|...+..+...|+ .|++++++.++... ++..+... + .|..+.+ .+.+.+.+... ++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRA-ALKAAVAAGVEDFGR 83 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence 568999987 9999999888888898 88889888655432 23333221 1 2333221 12222222221 26
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|+++.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999998754
No 393
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.34 E-value=0.68 Score=40.68 Aligned_cols=97 Identities=25% Similarity=0.243 Sum_probs=61.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
.++.+||=+|+|. |..+..+++. |. .|++++.+++..+.+++. |...-+.....+ .. .+....++.||+|
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~-~l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQ-DIAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HH-HHhhhcCCCCCEE
Confidence 4567888888754 6677777775 76 999999999988877653 321101111111 21 1222234479999
Q ss_pred Eecc-----CC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414 231 VECT-----GN-IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 231 ld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+-.. .. ...++.+.+.|+|+ |+++.+-
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 8421 12 24688999999998 9997764
No 394
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.34 E-value=0.31 Score=42.65 Aligned_cols=79 Identities=25% Similarity=0.255 Sum_probs=47.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG 226 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~---~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~ 226 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++++..+ .+.+.+... .+|..+.+ .....+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 4678999987 9999999999888999 7877777632222 223334321 23333322 12222222221 36
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998773
No 395
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.33 E-value=0.55 Score=39.96 Aligned_cols=115 Identities=16% Similarity=0.086 Sum_probs=69.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
.|.+|||+|+|.+|.-=+.+....|+ .|+++..+. +....+.+ .+.. .+. .. +.... + .++++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~----~~~~~--~--~~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIK-WIE-RE----FDAED--L--DDAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcc-hhh-cc----cChhh--h--cCceEEEEe
Confidence 45689999999999998999999999 777775544 33322222 2211 111 11 11110 1 148899999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEe
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 282 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~ 282 (341)
++.++.-+...+...+. +.++..-+......+.++...-...+.+.-+
T Consensus 80 t~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIs 127 (210)
T COG1648 80 TDDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAIS 127 (210)
T ss_pred CCCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEE
Confidence 98877777777788876 8888777655433344333222334444433
No 396
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.31 E-value=0.52 Score=41.67 Aligned_cols=106 Identities=17% Similarity=0.175 Sum_probs=67.5
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCC
Q 019414 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG 226 (341)
Q Consensus 148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~ 226 (341)
+....++.++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++.... ..+.....+ +.+ ....++.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence 35567889999999998753 5556677777777 999999999888887764221 111111111 110 0112236
Q ss_pred ccEEEe--cc---C---ChHHHHHHHHHhcCCCcEEEEEccC
Q 019414 227 VDRSVE--CT---G---NIDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 227 ~d~vld--~~---g---~~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
||+|+- +. + -...++++.+.|+|+ |++++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 999885 21 1 124678889999998 999987643
No 397
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.30 E-value=0.33 Score=43.61 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=49.2
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+... . + ..+.+ ...|+||.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~-----~~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---E--T--ARQVT-----EQADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---C--C--HHHHH-----hcCCEEEEecCCHH
Confidence 37789999999988888888898 89999999999888887776321 1 1 22222 13678888776543
Q ss_pred HHH
Q 019414 239 NMI 241 (341)
Q Consensus 239 ~~~ 241 (341)
.+.
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 333
No 398
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.29 E-value=0.36 Score=42.94 Aligned_cols=78 Identities=17% Similarity=0.244 Sum_probs=48.5
Q ss_pred CCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH-HHHcCCce--ecCCCCCChhHHHHHHHHhc--C
Q 019414 157 GSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEE-AKKFGVTD--FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 157 g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~---~~~~-~~~~g~~~--vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
+.++||+|+ +++|++.++.+...|+ +|+.+.++++ +.+. .++++... ..|..+.+ ...+.+.+... +
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~g 82 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDLG 82 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHcC
Confidence 678999986 4899999988888999 7888877743 2222 23445322 23444332 13233333222 4
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 83 ~iDilVnnAG~ 93 (274)
T PRK08415 83 KIDFIVHSVAF 93 (274)
T ss_pred CCCEEEECCcc
Confidence 79999998873
No 399
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.28 E-value=0.4 Score=45.03 Aligned_cols=81 Identities=21% Similarity=0.346 Sum_probs=49.6
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHHc-CCcee-cCCCCCChhHHHHHHHH
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAEM 222 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-------~~~~~-g~~~v-v~~~~~~~~~~~~i~~~ 222 (341)
....+.+|||+|+ |.+|...+..+...|+ .|+++.++..+.+ ..+.. ++..+ .|..+.+ .+.+.+...
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHHh
Confidence 3456778999987 9999999998888898 8888888765421 11112 23222 2333322 122222221
Q ss_pred hcCCccEEEeccCC
Q 019414 223 TNGGVDRSVECTGN 236 (341)
Q Consensus 223 ~~~~~d~vld~~g~ 236 (341)
..++|+||+|.+.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1169999998764
No 400
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.25 E-value=0.49 Score=39.96 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=30.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
..+|+|.|+|++|...++.+.+.|...++.++.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4679999999999999999999999889999887
No 401
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.22 E-value=0.37 Score=42.42 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=46.9
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce--ecCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~i~~~~~-- 224 (341)
++.++||+|+ +++|.+.++.+...|+ +|+.+.++++..+.+++ .+... ..|..+.+ +..+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDD-EINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHH-HHHHHHHHHHHHh
Confidence 4678999983 5899999888888999 77777655433333333 23222 23443322 12222322222
Q ss_pred CCccEEEeccCC
Q 019414 225 GGVDRSVECTGN 236 (341)
Q Consensus 225 ~~~d~vld~~g~ 236 (341)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999998763
No 402
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.20 E-value=0.34 Score=42.15 Aligned_cols=77 Identities=30% Similarity=0.365 Sum_probs=48.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHHHHHh--cCCc
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMT--NGGV 227 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~--~~~~ 227 (341)
.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ .+... ..|..+.+ .+...+.+.. .+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKED-EIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHhcCCC
Confidence 47899987 9999999988888899 89999888876654433 22211 12333321 1322222222 1368
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|++|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999987753
No 403
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.18 E-value=0.4 Score=43.11 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=48.5
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 238 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 238 (341)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+... . + +.+.+ ...|+||.|+....
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~--~--~~e~~-----~~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---S--T--AKAVA-----EQCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---C--C--HHHHH-----hcCCEEEEeCCCHH
Confidence 58899999999988887778888 88899999988887777765321 1 1 22222 13678887776544
Q ss_pred HHH
Q 019414 239 NMI 241 (341)
Q Consensus 239 ~~~ 241 (341)
...
T Consensus 71 ~~~ 73 (296)
T PRK11559 71 HVK 73 (296)
T ss_pred HHH
Confidence 333
No 404
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.17 E-value=0.75 Score=40.63 Aligned_cols=104 Identities=15% Similarity=0.239 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcC-------Cce--ecCCCCCChhHHHHH
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFG-------VTD--FVNTSEHDRPIQEVI 219 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g-------~~~--vv~~~~~~~~~~~~i 219 (341)
+...++++++||-+|+|. |..+..+++..+. ..|++++.+++..+.+++.. .+. ++..+..+ +
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------l 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------L 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc------C
Confidence 345678899999998753 4566777777652 38999999999888876421 111 11111100 0
Q ss_pred HHHhcCCccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414 220 AEMTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGVPSK 262 (341)
Q Consensus 220 ~~~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~~~~ 262 (341)
...++.||.|+-..+ . ...++++.+.|+|+ |+++.......
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~~ 186 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNKS 186 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCCC
Confidence 111236898874322 1 34688999999998 99988876543
No 405
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.14 E-value=0.57 Score=37.85 Aligned_cols=84 Identities=17% Similarity=0.148 Sum_probs=54.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC------CC-CCChhHHHHHHHHhcCCccEEE
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN------TS-EHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~------~~-~~~~~~~~~i~~~~~~~~d~vl 231 (341)
+|.|+|+|..|.+++..+...|. .|....++++..+.+++-+.....- .. .-..++.+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 47899999999999999999997 9999999998888777643311100 00 0001144333 3479999
Q ss_pred eccCChHHHHHHHHHhcC
Q 019414 232 ECTGNIDNMISAFECVHD 249 (341)
Q Consensus 232 d~~g~~~~~~~~~~~l~~ 249 (341)
-++.+ ..++..++.+.+
T Consensus 75 iavPs-~~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPS-QAHREVLEQLAP 91 (157)
T ss_dssp E-S-G-GGHHHHHHHHTT
T ss_pred ecccH-HHHHHHHHHHhh
Confidence 98876 556666666665
No 406
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=94.13 E-value=0.94 Score=36.62 Aligned_cols=87 Identities=24% Similarity=0.339 Sum_probs=52.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
++.+|.|+|-|..|++.++-+|-.|...+++.....+..+.+++-|.... + ..+.++ ..|+|+-.+.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~------~--~~eAv~-----~aDvV~~L~P 69 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM------S--VAEAVK-----KADVVMLLLP 69 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC------E--HHHHHH-----C-SEEEE-S-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec------c--HHHHHh-----hCCEEEEeCC
Confidence 46889999999999999999999999444455444447888999887522 1 444443 3789988875
Q ss_pred Ch---HHH-HHHHHHhcCCCcEEEE
Q 019414 236 NI---DNM-ISAFECVHDGWGVAVL 256 (341)
Q Consensus 236 ~~---~~~-~~~~~~l~~~~g~~v~ 256 (341)
.. +.+ ++....|+++ ..+++
T Consensus 70 D~~q~~vy~~~I~p~l~~G-~~L~f 93 (165)
T PF07991_consen 70 DEVQPEVYEEEIAPNLKPG-ATLVF 93 (165)
T ss_dssp HHHHHHHHHHHHHHHS-TT--EEEE
T ss_pred hHHHHHHHHHHHHhhCCCC-CEEEe
Confidence 41 122 3444577775 44433
No 407
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.13 E-value=0.78 Score=38.77 Aligned_cols=98 Identities=20% Similarity=0.202 Sum_probs=63.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh-cCCccEE
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS 230 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~-~~~~d~v 230 (341)
++.+||-+|+|. |..+..+++......|++++.+++..+.+++ .+...+ .....+ +.+.+.... ++.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLCGD--AVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEecC--HHHHHHHHcCccccceE
Confidence 567888888764 7777778877654489999999998887764 233221 111122 322333222 3478988
Q ss_pred EeccC--------------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 231 VECTG--------------NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 231 ld~~g--------------~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+-... ....++.+.+.|+|+ |.+++..
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 74322 134688899999998 9998764
No 408
>PRK06484 short chain dehydrogenase; Validated
Probab=94.12 E-value=0.29 Score=47.82 Aligned_cols=79 Identities=28% Similarity=0.421 Sum_probs=52.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
++.++||+|+ +++|.+.++.+...|+ +|+.++++.++.+. .++++... .+|..+.+ .+.+.+.+... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 5678999987 8999999999999999 88888888877654 44455432 23443322 13233333221 3699
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998763
No 409
>PRK07985 oxidoreductase; Provisional
Probab=94.11 E-value=0.84 Score=40.98 Aligned_cols=78 Identities=19% Similarity=0.202 Sum_probs=46.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc-
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~- 224 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+.+ ++.+... ..|..+.+ ...+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEK-FARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHH-HHHHHHHHHHHH
Confidence 4568999987 9999999988888999 777775432 222222 2334321 23443322 12223333222
Q ss_pred -CCccEEEeccC
Q 019414 225 -GGVDRSVECTG 235 (341)
Q Consensus 225 -~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 126 ~g~id~lv~~Ag 137 (294)
T PRK07985 126 LGGLDIMALVAG 137 (294)
T ss_pred hCCCCEEEECCC
Confidence 36899998776
No 410
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.10 E-value=0.46 Score=42.64 Aligned_cols=94 Identities=19% Similarity=0.244 Sum_probs=64.7
Q ss_pred hccccchhhhhhhhhhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHHcCCceecCCCCCC
Q 019414 136 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD 212 (341)
Q Consensus 136 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~~~~~~g~~~vv~~~~~~ 212 (341)
.+||+....+. +++.-.+ -.|.+|+|+| .+.+|.-++.++...|+ .|++.. ++..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD-------------------- 194 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence 35555333333 3344343 4799999999 59999999999999999 888873 3321
Q ss_pred hhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 213 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 213 ~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+.+.++ ..|+|+-++|.+..+...| ++++ ..++.+|...
T Consensus 195 --l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 195 --LPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --HHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 211121 3799999999987777665 8887 8999998643
No 411
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.10 E-value=0.38 Score=39.98 Aligned_cols=94 Identities=13% Similarity=0.154 Sum_probs=57.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
++++||=+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+.+ .....+ ..+ + ...+.+|+|+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVIT 114 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEE
Confidence 378888888753 555666666554448999999998766554 3454321 111111 211 1 1124799987
Q ss_pred ec-cCC-hHHHHHHHHHhcCCCcEEEEE
Q 019414 232 EC-TGN-IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 232 d~-~g~-~~~~~~~~~~l~~~~g~~v~~ 257 (341)
-. ... +..++.+.+.|+++ |+++..
T Consensus 115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 43 222 34567788899998 998866
No 412
>PRK06720 hypothetical protein; Provisional
Probab=94.09 E-value=0.5 Score=38.77 Aligned_cols=38 Identities=24% Similarity=0.151 Sum_probs=31.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 194 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~ 194 (341)
++..++|.|+ +++|...+..+...|+ +|+.+++++++.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4678899987 8999999888888898 888888877654
No 413
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.08 E-value=0.43 Score=41.66 Aligned_cols=78 Identities=23% Similarity=0.325 Sum_probs=47.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
|.++||+|+ |++|.+.++.+...|+ +|+.+++++.. .+.+++.+... ..|..+.+ +..+.+.+... +++|
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKID-GIPALLERAVAEFGHID 87 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCCCC
Confidence 578999987 9999999999988999 78777654322 23344444321 12332211 12222322221 3699
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
+++++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998874
No 414
>PRK04266 fibrillarin; Provisional
Probab=94.07 E-value=0.77 Score=39.62 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=60.2
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--c--eecCCCCCChhHHHHHHHHhcC
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T--DFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~--~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
+...+++|++||=.|+|. |..+..+++..+..+|++++.+++..+.+.+... + ..+..+..+ . .....+ .+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~--~-~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARK--P-ERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCC--c-chhhhc-cc
Confidence 346889999998888642 4445556666543489999999987764433211 1 111111111 0 000111 13
Q ss_pred CccEEEeccCChH----HHHHHHHHhcCCCcEEEEE
Q 019414 226 GVDRSVECTGNID----NMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 226 ~~d~vld~~g~~~----~~~~~~~~l~~~~g~~v~~ 257 (341)
.+|+++.-...+. .++.+.+.|+|+ |++++.
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999985443322 367888899998 998884
No 415
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.04 E-value=0.7 Score=37.20 Aligned_cols=96 Identities=22% Similarity=0.301 Sum_probs=61.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC----ChhHHHHHHHHhcC-CccEEE
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNG-GVDRSV 231 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~----~~~~~~~i~~~~~~-~~d~vl 231 (341)
.+|+|+|+ |.+|.+.++.-|..++ -|..++-++..+ .....+++.+.. .....+++.+...+ ++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 47899988 9999999999999999 888887665432 223344544332 11233333344445 899999
Q ss_pred eccCCh------------------------H--HHHHHHHHhcCCCcEEEEEccC
Q 019414 232 ECTGNI------------------------D--NMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 232 d~~g~~------------------------~--~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
-..|+. . ....+-.+|+++ |-+.+.|..
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk 131 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK 131 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence 766531 0 112345678897 888888753
No 416
>PLN00203 glutamyl-tRNA reductase
Probab=93.99 E-value=0.2 Score=48.65 Aligned_cols=73 Identities=21% Similarity=0.302 Sum_probs=51.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcC-Cce-ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g-~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~ 233 (341)
+.+|+|+|+|.+|.+++..+...|+..|+++.++.++.+.+. +++ ... +....+ ..+.+ ...|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~d----l~~al-----~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDE----MLACA-----AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhh----HHHHH-----hcCCEEEEc
Confidence 678999999999999999999999878999999988866554 453 221 111111 21111 258999999
Q ss_pred cCChH
Q 019414 234 TGNID 238 (341)
Q Consensus 234 ~g~~~ 238 (341)
++++.
T Consensus 337 T~s~~ 341 (519)
T PLN00203 337 TSSET 341 (519)
T ss_pred cCCCC
Confidence 87644
No 417
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=93.98 E-value=0.37 Score=43.51 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=37.2
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~ 203 (341)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~ 45 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTT 45 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence 58889999999988888777888 888999999998888876653
No 418
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.98 E-value=0.49 Score=42.25 Aligned_cols=66 Identities=23% Similarity=0.345 Sum_probs=47.8
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|..... ..+ . +.+ ...|+||.|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~~~--~-~~~-----~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---STD--L-SLL-----KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---cCC--H-hHh-----cCCCEEEEcCCH
Confidence 58899999999988888888898 899999999998888877752111 111 1 111 247888888864
No 419
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.97 E-value=0.73 Score=42.29 Aligned_cols=87 Identities=20% Similarity=0.278 Sum_probs=54.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.. ..+..+... . + +.+.+. ..|+|+-++.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~----~--~--l~ell~-----~aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY----R--P--LEELLR-----ESDFVSLHVP 213 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe----c--C--HHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999998 899998765433 233344321 1 1 322222 2577766654
Q ss_pred ChH-H---H-HHHHHHhcCCCcEEEEEc
Q 019414 236 NID-N---M-ISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 236 ~~~-~---~-~~~~~~l~~~~g~~v~~g 258 (341)
..+ + + ...+..++++ ..++.++
T Consensus 214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~a 240 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPT-AILVNTA 240 (333)
T ss_pred CChHHhhccCHHHHhcCCCC-eEEEECc
Confidence 321 1 1 2455666665 6666554
No 420
>PLN02256 arogenate dehydrogenase
Probab=93.97 E-value=0.58 Score=42.32 Aligned_cols=49 Identities=22% Similarity=0.364 Sum_probs=37.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~ 203 (341)
.-..+.+|.|+|.|.+|...+..++..|. .|++++++.. .+.++++|+.
T Consensus 32 ~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~ 80 (304)
T PLN02256 32 EKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVS 80 (304)
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCe
Confidence 33455689999999999998888888887 8888888764 3556667653
No 421
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.96 E-value=0.43 Score=41.69 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ +++|...+..+...|+ +++.+++++++.+.+ ++.+... ..|..+.+ ...+.+..... +
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 3678999987 9999999988888899 777787777665432 2233321 23443322 12222322222 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999998773
No 422
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.95 E-value=0.68 Score=39.01 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
..+|+|+|+|++|.-.+..+-..|.+++..++.+
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 5679999999999999999999999888888754
No 423
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.93 E-value=0.48 Score=43.03 Aligned_cols=88 Identities=17% Similarity=0.274 Sum_probs=54.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.. +....... .+ +.+.+. ..|+|+.+..
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~--~~--l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR--EE--LSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc--cc--HHHHHh-----cCCEEEECCC
Confidence 57899999999999999999999999 8888876554321 11111101 01 222221 3678777665
Q ss_pred ChHH-----HHHHHHHhcCCCcEEEEEcc
Q 019414 236 NIDN-----MISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 236 ~~~~-----~~~~~~~l~~~~g~~v~~g~ 259 (341)
..+. -...+..++++ ..++.++-
T Consensus 200 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 3221 12456677776 77766663
No 424
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=93.92 E-value=0.65 Score=42.53 Aligned_cols=134 Identities=19% Similarity=0.242 Sum_probs=79.9
Q ss_pred EEEEECCCHHH-HHHHHHHHHcC--CCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414 159 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 233 (341)
Q Consensus 159 ~vlI~G~g~~G-~~a~~la~~~g--~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~ 233 (341)
+|.|+|+|.++ ...+..++..+ ...+..+++++++.+ ..+++|.... +.+ +. ++... .+|+|+.+
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~----~~----~ll~~~~iD~V~Ia 74 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTD----LE----ELLADPDIDAVYIA 74 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCC----HH----HHhcCCCCCEEEEc
Confidence 57899987555 44565666554 445666678887744 5677887622 222 22 22233 59999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-ee--eecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NV--LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 306 (341)
Q Consensus 234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 306 (341)
+....+.+.+.+.|.. |+-|++.-+-....-+.... .. .+++.+.-.. ..+....++.+-+++.+|++-
T Consensus 75 tp~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~lG 146 (342)
T COG0673 75 TPNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGALG 146 (342)
T ss_pred CCChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCcC
Confidence 9888889999999987 78888874322211111100 11 1233333222 222334688888999998663
No 425
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.87 E-value=0.48 Score=41.67 Aligned_cols=79 Identities=22% Similarity=0.401 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.+... ..|..+.+ ...+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence 4568999987 9999998888888899 788888887665432 2334321 23333321 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 426
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.86 E-value=1.3 Score=38.30 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=44.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhH----HHHHHcCCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~----~~~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~ 225 (341)
+.++||+|+ |.+|...++-+...|+ .++.+.+ +.++. ..+++.+... . .|..+.+ .+...+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence 568999987 9999998888888999 5655443 32222 2233344321 1 2333322 12222222221 3
Q ss_pred CccEEEeccC
Q 019414 226 GVDRSVECTG 235 (341)
Q Consensus 226 ~~d~vld~~g 235 (341)
++|++|.+.|
T Consensus 84 ~~d~vi~~ag 93 (252)
T PRK06077 84 VADILVNNAG 93 (252)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 427
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.85 E-value=0.15 Score=39.57 Aligned_cols=79 Identities=24% Similarity=0.333 Sum_probs=48.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.-+|-|+|+|.+|......++..|+ .|..+. ++.++.+.+.. ++...+.+..+ .. ...|++|-++
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav 76 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV 76 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence 3478999999999999999999998 777775 44445555544 34333322211 11 2589999999
Q ss_pred CChHHHHHHHHHhcC
Q 019414 235 GNIDNMISAFECVHD 249 (341)
Q Consensus 235 g~~~~~~~~~~~l~~ 249 (341)
.+ +.++..++.|..
T Consensus 77 pD-daI~~va~~La~ 90 (127)
T PF10727_consen 77 PD-DAIAEVAEQLAQ 90 (127)
T ss_dssp -C-CHHHHHHHHHHC
T ss_pred ch-HHHHHHHHHHHH
Confidence 77 577777777764
No 428
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.85 E-value=0.33 Score=41.85 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=64.4
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh
Q 019414 149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 223 (341)
Q Consensus 149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~ 223 (341)
.....++++++||=+|+|. |..+..+++..+. ..|++++.+++..+.+++ .+.+.+- ....+ ..+ + ...
T Consensus 38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~-~-~~~ 111 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHGN--AME-L-PFD 111 (231)
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEec--hhc-C-CCC
Confidence 3456778899999998753 5566777777642 389999999988776654 2222210 00011 110 0 112
Q ss_pred cCCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414 224 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 224 ~~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.+.+|+|+-... ....++++.+.|+++ |+++....
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 247999874321 124577889999998 99987754
No 429
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.85 E-value=0.69 Score=42.31 Aligned_cols=90 Identities=20% Similarity=0.093 Sum_probs=60.7
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee------cC--C-CCCChhHHHHHHHHhcCCccE
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF------VN--T-SEHDRPIQEVIAEMTNGGVDR 229 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v------v~--~-~~~~~~~~~~i~~~~~~~~d~ 229 (341)
+|.|+|+|.+|.+.+..+...|. .|...++++++.+.+++.+.... +. . ...+ ..+.+ +..|+
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~--~~e~~-----~~aD~ 77 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD--PEEAL-----AGADF 77 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC--HHHHH-----cCCCE
Confidence 68999999999999998888898 89999998888777665421100 00 0 0011 22211 35899
Q ss_pred EEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414 230 SVECTGNIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
||-++.+. .++.+++.++++ -.++.+.
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~ 104 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCA 104 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEe
Confidence 99999774 567777888875 5555553
No 430
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.85 E-value=0.53 Score=40.57 Aligned_cols=74 Identities=27% Similarity=0.391 Sum_probs=53.0
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH--cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~--~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
+++|+|+|.+|...++.+...|. .|+.++.++++.+...+ +... ++..+..+ .+.+++.--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~---~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATD---EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence 57889999999999999999998 99999999999777333 5543 33233322 223444433379999988887
Q ss_pred h
Q 019414 237 I 237 (341)
Q Consensus 237 ~ 237 (341)
.
T Consensus 77 d 77 (225)
T COG0569 77 D 77 (225)
T ss_pred C
Confidence 3
No 431
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.29 Score=42.86 Aligned_cols=75 Identities=27% Similarity=0.278 Sum_probs=46.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~--~~~d~vl 231 (341)
+|.++||+|+ |++|...++.+...|+ +|+.+.+++++.. .-... ...|..+.+ .+.+.+.+... +++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAE-GCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 9999999988888899 8888887755321 11111 123333322 12222222211 3699999
Q ss_pred eccC
Q 019414 232 ECTG 235 (341)
Q Consensus 232 d~~g 235 (341)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 432
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.84 E-value=0.42 Score=41.48 Aligned_cols=78 Identities=27% Similarity=0.305 Sum_probs=46.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHH----HHHcCCce-e--cCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~-v~~~~~~~~~----~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~-- 224 (341)
++.++||+|+ |.+|+..+..+...|+ +|+. ..++.++.+. +++.+... . .|..+.+ .....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVE-KIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 3568999987 9999999999988998 5554 4566655432 23334322 1 2333221 12222322221
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|++|++.|
T Consensus 81 ~~id~vi~~ag 91 (250)
T PRK08063 81 GRLDVFVNNAA 91 (250)
T ss_pred CCCCEEEECCC
Confidence 36899999876
No 433
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.84 E-value=0.42 Score=47.77 Aligned_cols=77 Identities=14% Similarity=0.280 Sum_probs=57.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+..+ .+.+++..-+.+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCC---HHHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999998 899999999999999998875433 22222 112333222378999988877
Q ss_pred hH
Q 019414 237 ID 238 (341)
Q Consensus 237 ~~ 238 (341)
++
T Consensus 475 ~~ 476 (621)
T PRK03562 475 PQ 476 (621)
T ss_pred HH
Confidence 54
No 434
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=93.83 E-value=0.9 Score=43.67 Aligned_cols=102 Identities=20% Similarity=0.287 Sum_probs=63.9
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGV 227 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~ 227 (341)
.+++|++||=..+++ |--++++|..++ -..|++.+.+..|.+.+ +++|+..+........ .+.....+.|
T Consensus 110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~----~~~~~~~~~f 184 (470)
T PRK11933 110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGR----VFGAALPETF 184 (470)
T ss_pred CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchh----hhhhhchhhc
Confidence 678999988886543 223455565553 34899999999996654 5578865432222110 1112223468
Q ss_pred cEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414 228 DRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 228 d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
|.|+ | |+|. .+.+..+++.|+++ |++|..-..
T Consensus 185 D~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpG-G~LVYSTCT 244 (470)
T PRK11933 185 DAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPG-GTLVYSTCT 244 (470)
T ss_pred CeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEECCC
Confidence 8886 6 4543 24567788999998 999776543
No 435
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=93.82 E-value=0.58 Score=42.70 Aligned_cols=100 Identities=19% Similarity=0.288 Sum_probs=60.6
Q ss_pred EEEEECCCHHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHHcCCce--------------ecCCCCCChhHHHH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAG----ASRIIGVDR--SSKRFEEAKKFGVTD--------------FVNTSEHDRPIQEV 218 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g----~~~vv~v~~--~~~~~~~~~~~g~~~--------------vv~~~~~~~~~~~~ 218 (341)
+|.|.|.|.+|...++.+...+ . .|+++-. +.+.+.++.++.-.+ .++-..-.-.-.+.
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999887653 5 5666533 233344454433210 11100000000001
Q ss_pred HHHHhc--CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414 219 IAEMTN--GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 219 i~~~~~--~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
..+... .++|+||+|+|.....+.+..++..| ++.|+++..
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence 122222 38999999999877888899999987 888888855
No 436
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.82 E-value=0.43 Score=41.33 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=45.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhh-HHHH---HHcCCcee---cCCCCCChhHHHHHHHHhc--C
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKR-FEEA---KKFGVTDF---VNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~-~~~~---~~~g~~~v---v~~~~~~~~~~~~i~~~~~--~ 225 (341)
+.++||+|+ |++|...++.+...|+ +|+.. .++..+ .+.+ ++.+.... .|..+.+ .+.+.+.+... +
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEVG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 567899986 9999999999988998 56654 333332 2233 33444322 3333321 12222222221 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|+++++.|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 437
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.82 E-value=0.45 Score=43.64 Aligned_cols=99 Identities=21% Similarity=0.295 Sum_probs=62.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
.++.+||=+|+|. |..+..+++..+...+++++.+++..+.+++.....-+.....+ ..+ + ...++.||+|+-+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD--~e~-l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGD--AED-L-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEecc--HHh-C-CCCCCceeEEEEcC
Confidence 4678999898765 66777778776545899999998887777764221111111111 111 0 11123699887532
Q ss_pred C-----C-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 235 G-----N-IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 235 g-----~-~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
. . ...++++.+.|+++ |++++.+.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 1 1 24678999999998 99988753
No 438
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.39 Score=42.56 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=29.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK 192 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~ 192 (341)
.+.++||+|+ |++|...+..+...|+ +|+.++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4568999987 9999999988888899 8888887654
No 439
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.78 E-value=0.81 Score=42.50 Aligned_cols=97 Identities=16% Similarity=0.313 Sum_probs=62.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEc--CChhh-HHHHHHcCCceecCCCCCC-hhH--------------H
Q 019414 158 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPI--------------Q 216 (341)
Q Consensus 158 ~~vlI~G~-g~~G~~a~~la~~~--g~~~vv~v~--~~~~~-~~~~~~~g~~~vv~~~~~~-~~~--------------~ 216 (341)
.+|.|+|+ |++|..++.+.+.. .+ +|+++. ++.++ .+.++++++..++..++.. ..+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 36889995 99999999998765 45 666664 34444 3456778887765443321 001 1
Q ss_pred HHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEE
Q 019414 217 EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 256 (341)
Q Consensus 217 ~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~ 256 (341)
+.+.++... .+|+|+.++++...+.-.+..+..+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122223333 5899999988767778888888875 55444
No 440
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.77 E-value=0.42 Score=44.27 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=31.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
..+|+|+|+|++|..+++.+-..|.+++..++.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 47899999999999999999999999999988764
No 441
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=93.76 E-value=0.61 Score=41.58 Aligned_cols=88 Identities=19% Similarity=0.228 Sum_probs=61.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
+|.++|-|.+|.-+++=+...|+ .|.+.++++++ .+.+++.|+...-+ ..+... ..|+||-+++++
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa~-----~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAAA-----EADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHHH-----hCCEEEEecCCH
Confidence 57788999999999999999999 99999999999 88898888864321 111221 367888777776
Q ss_pred HHHHHHH-------HHhcCCCcEEEEEccC
Q 019414 238 DNMISAF-------ECVHDGWGVAVLVGVP 260 (341)
Q Consensus 238 ~~~~~~~-------~~l~~~~g~~v~~g~~ 260 (341)
+.....+ ..++++ ..++.+...
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi 97 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTI 97 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence 6555544 223354 666666543
No 442
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.75 E-value=0.41 Score=42.24 Aligned_cols=76 Identities=21% Similarity=0.240 Sum_probs=47.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ +..+... ..|..+.+ .+.+.+..... +++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYS-QLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence 6899987 9999999888888899 788888887765432 2233322 12332221 12222222221 3699
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
++|++.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 443
>PRK06484 short chain dehydrogenase; Validated
Probab=93.75 E-value=0.5 Score=46.10 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=52.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
.|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++... ..|..+.+ ...+.+.+... +.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence 5678999987 9999999998888999 89999888877665543 44332 23443332 12222322221 3699
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
++|++.|.
T Consensus 346 ~li~nAg~ 353 (520)
T PRK06484 346 VLVNNAGI 353 (520)
T ss_pred EEEECCCC
Confidence 99998773
No 444
>PLN03013 cysteine synthase
Probab=93.74 E-value=1.3 Score=41.96 Aligned_cols=57 Identities=26% Similarity=0.160 Sum_probs=43.4
Q ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHHcCCceec
Q 019414 150 NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFV 206 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~vv 206 (341)
+...+.+|.+.+|.. +|+.|++.+.+++.+|++-++++. .+++|.+.++.+|++.++
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 445677886666665 599999999999999995444443 366888999999997653
No 445
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.73 E-value=1 Score=42.92 Aligned_cols=105 Identities=18% Similarity=0.267 Sum_probs=64.5
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
...++++|++||=.|+|+ |--++.++...+ ...|++++.++++.+.+++ +|.+.+. ....+ .. .+.....
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~D--a~-~l~~~~~ 305 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIAD--AE-RLTEYVQ 305 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEECc--hh-hhhhhhh
Confidence 345788999988887643 444555666552 2399999999999887654 5664321 11111 11 1111223
Q ss_pred CCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414 225 GGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 225 ~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
+.||.|+ | |+|. .+.+..+++.++++ |.++.....
T Consensus 306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 4699987 4 4332 12366788999998 998777654
No 446
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.73 E-value=0.67 Score=40.20 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=34.4
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 195 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~ 195 (341)
+..++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~ 50 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLE 50 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHH
Confidence 3457889999987 9999999888888899 8888888876643
No 447
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.71 E-value=0.61 Score=41.87 Aligned_cols=94 Identities=22% Similarity=0.234 Sum_probs=65.8
Q ss_pred hccccchhhhhhhhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414 136 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 213 (341)
Q Consensus 136 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~ 213 (341)
.+||+....+. +++.-++ -.|.+|.|+|. +.+|.-++.++...|+ .|++..+..+ +
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~- 195 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D- 195 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence 45655333333 3444444 36899999997 6999999999999999 8888854422 1
Q ss_pred hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414 214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
..+..+ ..|+|+-++|.+..+...| ++++ ..++.+|..
T Consensus 196 -l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 196 -AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 222222 3799999999887777665 8887 899998854
No 448
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.69 E-value=0.58 Score=41.53 Aligned_cols=78 Identities=23% Similarity=0.385 Sum_probs=46.9
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHH-HHHcCCce--ecCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEE-AKKFGVTD--FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~---~~~~~-~~~~g~~~--vv~~~~~~~~~~~~i~~~~~-- 224 (341)
.+.++||+|+ +++|++.++.+...|+ +|+.+.+++ ++.+. .++++... ..|..+.+ ...+.+.+...
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~ 86 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEA-SIDAVFETLEKKW 86 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHH-HHHHHHHHHHHhc
Confidence 4678999986 5899999988888999 777776654 22222 23345322 23333321 12222222222
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 36999999876
No 449
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.69 E-value=0.76 Score=39.42 Aligned_cols=101 Identities=19% Similarity=0.111 Sum_probs=60.2
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceecC-------CCCCChh-HHHHHHHH-
Q 019414 153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEM- 222 (341)
Q Consensus 153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vv~-------~~~~~~~-~~~~i~~~- 222 (341)
.+.++.+||+.|+|. |.-++.||. .|+ .|++++.++...+.+ ++.+...... +...+.. +...+.++
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 456778999998864 777777775 698 999999999988865 3333321100 0000000 00001111
Q ss_pred --hcCCccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 019414 223 --TNGGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 223 --~~~~~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~ 257 (341)
..+.||.|+|... . ...++.+.++|+|+ |++.++
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1126899998542 1 24578889999998 875543
No 450
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.68 E-value=0.43 Score=41.70 Aligned_cols=76 Identities=17% Similarity=0.174 Sum_probs=47.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc--CCcee-cCCCCCChhHHHHHHHHhcCCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~--g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vl 231 (341)
.+.+|||+|+ |.+|...+..+...|+ .|+++.++.++....... ++..+ .|..+. .+.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG----SDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC----HHHHHHHhhcCCCEEE
Confidence 3568999997 9999999888888898 888887887765432211 22222 233331 1122222222689999
Q ss_pred eccCC
Q 019414 232 ECTGN 236 (341)
Q Consensus 232 d~~g~ 236 (341)
.+.|.
T Consensus 91 ~~~g~ 95 (251)
T PLN00141 91 CATGF 95 (251)
T ss_pred ECCCC
Confidence 88763
No 451
>PRK11579 putative oxidoreductase; Provisional
Probab=93.67 E-value=0.94 Score=41.78 Aligned_cols=131 Identities=17% Similarity=0.161 Sum_probs=72.6
Q ss_pred EEEEECCCHHHH-HHHHHH-HHcCCCEEEE-EcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 159 SVAVFGLGAVGL-AAAEGA-RIAGASRIIG-VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 159 ~vlI~G~g~~G~-~a~~la-~~~g~~~vv~-v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
+|.|+|.|.+|. ..+... +.-++ ++++ +++++++.. ++++...+ +.+ +.+.+. ...+|+|+.|+.
T Consensus 6 rvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~--~~~----~~ell~---~~~vD~V~I~tp 73 (346)
T PRK11579 6 RVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTV--VSE----PQHLFN---DPNIDLIVIPTP 73 (346)
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCce--eCC----HHHHhc---CCCCCEEEEcCC
Confidence 689999999986 344433 44467 5554 444544432 33432222 111 332221 237999999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 305 (341)
Q Consensus 236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 305 (341)
.....+.+.+++.. |+-|++.-+-....-... ...-.+++.+.-.. +.+....++.+-+++++|.|
T Consensus 74 ~~~H~~~~~~al~a--GkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~--~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 74 NDTHFPLAKAALEA--GKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFH--NRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred cHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--eccCCHHHHHHHHHHhcCCC
Confidence 87888899999876 677778633211110000 00012344443222 22223468888899999866
No 452
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.61 E-value=0.41 Score=41.22 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=65.8
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCc----eecCCCCCChhHHHHHHHHhc
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~i~~~~~ 224 (341)
......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.. ..+.....+ +.+. ....
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~ 119 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD 119 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence 334566788999999876 778888888775 23999999999888877764211 111111111 1110 0122
Q ss_pred CCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEEccC
Q 019414 225 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 225 ~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
+.+|+|+-... ....+..+.+.|+++ |+++.....
T Consensus 120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 160 (239)
T PRK00216 120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS 160 (239)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence 36898874211 234678889999998 999887643
No 453
>PRK12743 oxidoreductase; Provisional
Probab=93.58 E-value=0.53 Score=41.17 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=46.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHH----HHHHcCCce-e--cCCCCCCh--hHHHHHHHHhcC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFE----EAKKFGVTD-F--VNTSEHDR--PIQEVIAEMTNG 225 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~----~~~~~g~~~-v--v~~~~~~~--~~~~~i~~~~~~ 225 (341)
+.++||+|+ |++|...++.+...|+ +|+.+. ++.++.+ .++..+... . .|..+.+. .+.+.+.+.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 457999987 9999999999999999 666654 4444432 233345322 1 34333220 1222232222 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998773
No 454
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.56 E-value=0.32 Score=43.50 Aligned_cols=43 Identities=26% Similarity=0.274 Sum_probs=36.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~ 198 (341)
.+.+++|+|+|+.+.+++.-+...|+++++.+.++.+|.+.+.
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4678999999999999988888899889999999988866543
No 455
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.55 E-value=0.45 Score=42.48 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=45.1
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCcee-----cCCCCCChhHHHHHHHHhcC-Cc
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-----VNTSEHDRPIQEVIAEMTNG-GV 227 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~v-----v~~~~~~~~~~~~i~~~~~~-~~ 227 (341)
|||+|+ |.+|...++-+...+.++++.+++++.++..++. + ....+ ....+-. -.+.+.+.... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr--d~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR--DKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC--HHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc--CHHHHHHHHhhcCC
Confidence 789986 9999998888888887799999999988766543 4 11111 0111111 34456666665 89
Q ss_pred cEEEeccCC
Q 019414 228 DRSVECTGN 236 (341)
Q Consensus 228 d~vld~~g~ 236 (341)
|+||++..-
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999998763
No 456
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.55 E-value=0.61 Score=43.44 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
.+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45689999999999999999999999899999876
No 457
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.53 E-value=0.47 Score=40.90 Aligned_cols=69 Identities=22% Similarity=0.304 Sum_probs=48.2
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
|+|+|+ |.+|...++.+...+. +|.++.|+.. ..+.+++.|+..+ .|+. + .+.+.+... ++|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~--~---~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYD--D---PESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccC--C---HHHHHHHHc-CCceEEeecC
Confidence 789997 9999999999988888 7777777754 3556778888654 2222 2 223333332 6999998887
No 458
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=93.53 E-value=0.63 Score=42.03 Aligned_cols=44 Identities=27% Similarity=0.447 Sum_probs=37.2
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~ 203 (341)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence 58889999999988888888898 889999999988877776653
No 459
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.52 E-value=0.56 Score=42.22 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=35.6
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~ 202 (341)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~ 44 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGL 44 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCC
Confidence 58999999999988888877887 88888888888777776554
No 460
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.52 E-value=2.2 Score=38.91 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=33.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~ 196 (341)
.+|.|+|+|.+|...++.+...|+ .|+..+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 479999999999999998889999 99999998876554
No 461
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.51 E-value=0.64 Score=41.00 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=46.1
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCce--ecCCCCCChhHHHHHHHHhc--
Q 019414 156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD--FVNTSEHDRPIQEVIAEMTN-- 224 (341)
Q Consensus 156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~--vv~~~~~~~~~~~~i~~~~~-- 224 (341)
.+.++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.++++ +... ..|..+.+ .+.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDA-SIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHH-HHHHHHHHHHhhc
Confidence 4678999987 3 899998888888899 777777763222223322 2111 23433322 13333333222
Q ss_pred CCccEEEeccC
Q 019414 225 GGVDRSVECTG 235 (341)
Q Consensus 225 ~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999886
No 462
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.49 E-value=0.49 Score=44.63 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=47.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc-ee--cCCCCCChhHHHHHHHHhcCCccEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~v--v~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
.+.+++|+|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+.. .. .|..+. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence 3678999987 9999999988888899 888888877665332 211111 11 233221 1233322 369999
Q ss_pred EeccCC
Q 019414 231 VECTGN 236 (341)
Q Consensus 231 ld~~g~ 236 (341)
|++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 987763
No 463
>PRK13984 putative oxidoreductase; Provisional
Probab=93.48 E-value=0.46 Score=47.43 Aligned_cols=77 Identities=27% Similarity=0.294 Sum_probs=53.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHHcCCceecCCCCC-
Q 019414 154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEH- 211 (341)
Q Consensus 154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~vv~~~~~- 211 (341)
.+++.+|+|+|+|..|+.++..++..|. .|+++++.+ ...+.++++|++..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4568889999999999999999999998 787776543 12456677888765543321
Q ss_pred ChhHHHHHHHHhcCCccEEEeccCC
Q 019414 212 DRPIQEVIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 212 ~~~~~~~i~~~~~~~~d~vld~~g~ 236 (341)
+... +.++ ..+|.+|-++|+
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1012 1221 269999999985
No 464
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=93.48 E-value=0.2 Score=43.82 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=61.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----------eecCCCCCChhHHHHHHHHhcC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----------DFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~----------~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
...+|||+|+|. |..+-.+++....+.|.+++-+++=.+.++++-.. .++ . .| ..+-+++ +.+
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~-~--~D--g~~~l~~-~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRII-I--GD--GRKFLKE-TQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEE-E--ST--HHHHHHT-SSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEE-E--hh--hHHHHHh-ccC
Confidence 568899998654 45566777777667999999999998988874221 111 1 11 3334444 334
Q ss_pred -CccEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414 226 -GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 226 -~~d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g 258 (341)
.+|+|+ |... +.+-++.+.++|+++ |.++.-.
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 799987 6543 235688899999998 9888765
No 465
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=93.46 E-value=0.42 Score=40.40 Aligned_cols=96 Identities=18% Similarity=0.102 Sum_probs=69.4
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEE
Q 019414 152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS 230 (341)
Q Consensus 152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~v 230 (341)
..+.+-.+|.=+|+|+ |..+-+|+++.....+.++++|.+..+.+++...+.-+ ....++.+.++ ..|++
T Consensus 26 Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f--------~~aDl~~w~p~~~~dll 96 (257)
T COG4106 26 VPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATF--------EEADLRTWKPEQPTDLL 96 (257)
T ss_pred CCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCce--------ecccHhhcCCCCccchh
Confidence 3445566777778876 88899999999655999999999999998877665332 12235666666 77887
Q ss_pred EeccC------ChHHHHHHHHHhcCCCcEEEEE
Q 019414 231 VECTG------NIDNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 231 ld~~g------~~~~~~~~~~~l~~~~g~~v~~ 257 (341)
|-..- -++.+++.+..|.|+ |.+..-
T Consensus 97 faNAvlqWlpdH~~ll~rL~~~L~Pg-g~LAVQ 128 (257)
T COG4106 97 FANAVLQWLPDHPELLPRLVSQLAPG-GVLAVQ 128 (257)
T ss_pred hhhhhhhhccccHHHHHHHHHhhCCC-ceEEEE
Confidence 74321 246789999999997 776543
No 466
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.42 E-value=0.44 Score=42.59 Aligned_cols=83 Identities=29% Similarity=0.421 Sum_probs=55.1
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecC---CCCCC----hhHHHHHHHHh
Q 019414 153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVN---TSEHD----RPIQEVIAEMT 223 (341)
Q Consensus 153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~---~~~~~----~~~~~~i~~~~ 223 (341)
+.+|.-.|+|+|+ .++|++.+..++..|+ .|..+.++.+|+..+++ ++....+. +.+.| +.....++++-
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence 4455578999975 8999999999999999 88888899988776543 44322111 21111 11333344432
Q ss_pred --cCCccEEEeccCC
Q 019414 224 --NGGVDRSVECTGN 236 (341)
Q Consensus 224 --~~~~d~vld~~g~ 236 (341)
.+.+|.+|.|.|.
T Consensus 108 ~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 108 DLEGPIDNLFCCAGV 122 (331)
T ss_pred hccCCcceEEEecCc
Confidence 2379999999985
No 467
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.42 E-value=0.56 Score=40.69 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=45.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH-HHcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA-KKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD 228 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~-~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d 228 (341)
+.++||+|+ |++|...+..+...|+ +|+.+ .+++++.+.+ .+++... ..|..+.+. .+.+.+.+..+.++|
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 457999986 9999999998888899 66554 3444444333 3343221 124333220 122223333333499
Q ss_pred EEEeccC
Q 019414 229 RSVECTG 235 (341)
Q Consensus 229 ~vld~~g 235 (341)
++|++.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9998765
No 468
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.41 E-value=0.5 Score=40.44 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=46.3
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce-ecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414 160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235 (341)
Q Consensus 160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g 235 (341)
|||+|+ |-+|..++..+...|. .|+.+.++......... ..... ..|..+. +. +.+...+ .+|.||++.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~--~~---~~~~~~~~~~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTDK--EQ---LEKLLEKANIDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTSH--HH---HHHHHHHHTESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecccc--cc---ccccccccCceEEEEeec
Confidence 789987 9999999999999999 67777676665544333 23322 2233322 12 2222223 6899999987
Q ss_pred C
Q 019414 236 N 236 (341)
Q Consensus 236 ~ 236 (341)
.
T Consensus 75 ~ 75 (236)
T PF01370_consen 75 F 75 (236)
T ss_dssp S
T ss_pred c
Confidence 5
No 469
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.40 E-value=0.59 Score=40.33 Aligned_cols=78 Identities=23% Similarity=0.340 Sum_probs=46.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHHH----HcCCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~ 225 (341)
+.++||+|+ |.+|...+..+...|+ +|+.+ .++.++.+.+. ..+... + .|..+.+ .+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEE-DVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhC
Confidence 458999987 9999998888777898 77777 78776654332 222211 1 2333322 12222222211 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998764
No 470
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.35 E-value=0.6 Score=46.55 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=64.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 237 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 237 (341)
++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++ -+..+ .+.+++.--+..|.++-+.+++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDATQ---LELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence 579999999999999999999998 899999999999999998875443 22222 1223332223789999888875
Q ss_pred HHHH---HHHHHhcCCCcEEEEE
Q 019414 238 DNMI---SAFECVHDGWGVAVLV 257 (341)
Q Consensus 238 ~~~~---~~~~~l~~~~g~~v~~ 257 (341)
+.-. +..+...|. -+++.-
T Consensus 476 ~~n~~i~~~~r~~~p~-~~IiaR 497 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILAR 497 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 4322 233444555 455443
No 471
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=93.31 E-value=1.5 Score=41.58 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=50.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH---------hc-CCc
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------TN-GGV 227 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~---------~~-~~~ 227 (341)
.+|.|+|.|.+|+.++..+...|. .|+++++++++.+.++. |...+ .+.. +.+.+++. +. ...
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e~~--l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VEPD--LDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CCCC--HHHHHHHHhhcCceeeecccccC
Confidence 468999999999999888888898 99999999999887643 33211 2222 33332211 11 157
Q ss_pred cEEEeccCCh
Q 019414 228 DRSVECTGNI 237 (341)
Q Consensus 228 d~vld~~g~~ 237 (341)
|++|-|++.+
T Consensus 77 Dvvii~vptp 86 (415)
T PRK11064 77 DAFLIAVPTP 86 (415)
T ss_pred CEEEEEcCCC
Confidence 9999998875
No 472
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=93.30 E-value=0.61 Score=42.09 Aligned_cols=44 Identities=32% Similarity=0.548 Sum_probs=37.0
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~ 203 (341)
+|.++|.|.+|...+.-+...|. .|++.++++++.+.+++.|+.
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~ 45 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGIT 45 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCe
Confidence 47889999999988888888888 888899999988888777753
No 473
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.28 E-value=1.2 Score=40.29 Aligned_cols=87 Identities=24% Similarity=0.325 Sum_probs=58.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 234 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~ 234 (341)
-.|.+|.|+|-|.+|++.++.++.+|. +|++..+.....+.++..|+. +. + +.+.+. ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-----s--l~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-----S--VSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-----C--HHHHHh-----cCCEEEEeC
Confidence 367899999999999999999999999 777765655555666666763 21 1 333332 379998877
Q ss_pred CChHH---H-HHHHHHhcCCCcEEEE
Q 019414 235 GNIDN---M-ISAFECVHDGWGVAVL 256 (341)
Q Consensus 235 g~~~~---~-~~~~~~l~~~~g~~v~ 256 (341)
..+.. + ...+..++++ ..+++
T Consensus 80 Pd~~t~~V~~~eil~~MK~G-aiL~f 104 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREG-QMLLF 104 (335)
T ss_pred CChHHHHHHHHHHHhcCCCC-CEEEE
Confidence 65332 2 2355666674 44433
No 474
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=93.27 E-value=1.6 Score=36.32 Aligned_cols=40 Identities=38% Similarity=0.596 Sum_probs=32.6
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~ 199 (341)
+|-|+|.|-+|+-++......|. +|++++.++++.+.+.+
T Consensus 2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~ 41 (185)
T PF03721_consen 2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN 41 (185)
T ss_dssp EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT
T ss_pred EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh
Confidence 57899999999999999999998 99999999999988765
No 475
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.25 E-value=0.35 Score=42.53 Aligned_cols=75 Identities=21% Similarity=0.302 Sum_probs=46.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 231 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl 231 (341)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. ..+.. ..|..+.+ .+.+.+..... +++|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSAE-EVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 3568999986 9999999999888999 88888777654321 11111 23433321 12222322221 3689999
Q ss_pred eccC
Q 019414 232 ECTG 235 (341)
Q Consensus 232 d~~g 235 (341)
++.|
T Consensus 83 ~~Ag 86 (266)
T PRK06171 83 NNAG 86 (266)
T ss_pred ECCc
Confidence 9877
No 476
>PRK09135 pteridine reductase; Provisional
Probab=93.24 E-value=0.7 Score=39.91 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=29.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 3568999987 9999999888888899 888887753
No 477
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=93.21 E-value=0.66 Score=42.97 Aligned_cols=104 Identities=28% Similarity=0.440 Sum_probs=66.1
Q ss_pred hhcCCCCCCEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce--ecCCCCCChhHHHHHHH
Q 019414 150 NVAKPERGSSVAVFG-L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--FVNTSEHDRPIQEVIAE 221 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G-~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vv~~~~~~~~~~~~i~~ 221 (341)
....++||++||=.- + |+=-...+|+....|. .|++.+.++.|.+.+ +.+|... ++...+.. +. ..
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~--~~---~~ 223 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARR--LA---EL 223 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccc--cc---cc
Confidence 457899999998873 3 5443434444444455 789999999997765 4588874 33332211 11 11
Q ss_pred HhcC-CccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414 222 MTNG-GVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 222 ~~~~-~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
...+ .||.|+ | |+|. .+.+..+++.++++ |+++.....
T Consensus 224 ~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYSTCS 290 (355)
T COG0144 224 LPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYSTCS 290 (355)
T ss_pred ccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEccC
Confidence 1222 489875 6 4543 25677899999997 999887653
No 478
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.19 E-value=1.2 Score=40.91 Aligned_cols=86 Identities=22% Similarity=0.216 Sum_probs=55.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g 235 (341)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.+..... .. +. .+ +.+.+ ...|+|+-++.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~-~~--l~ell-----~~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK-DS--VKEAI-----KDADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc-CC--HHHHH-----hcCCEEEEeCC
Confidence 56789999999999999999999998 899998876543211 00 10 01 22222 13788887776
Q ss_pred ChH-----HHHHHHHHhcCCCcEEEEEcc
Q 019414 236 NID-----NMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 236 ~~~-----~~~~~~~~l~~~~g~~v~~g~ 259 (341)
..+ .....+..++++ ..++.++-
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 432 123455667776 66666653
No 479
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.16 E-value=0.61 Score=42.34 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=30.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 194 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~ 194 (341)
.|.+|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4678999986 9999999988888898 787776766543
No 480
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.76 Score=41.07 Aligned_cols=35 Identities=34% Similarity=0.411 Sum_probs=28.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 191 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~ 191 (341)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++.
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 4678999987 9999999888888899 777776553
No 481
>PRK12937 short chain dehydrogenase; Provisional
Probab=93.14 E-value=0.76 Score=39.65 Aligned_cols=79 Identities=16% Similarity=0.165 Sum_probs=45.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH----HHHHcCCce---ecCCCCCChhHHHHHHHHh--c
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--N 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~----~~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~ 224 (341)
++.++||+|+ |++|...++.+...|+ +++.+.++. ++.+ .++..+... .+|..+.+ .+.+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAA-AVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence 4578999986 9999999999999999 666655543 2222 223334321 12333221 1222222221 1
Q ss_pred CCccEEEeccCC
Q 019414 225 GGVDRSVECTGN 236 (341)
Q Consensus 225 ~~~d~vld~~g~ 236 (341)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 369999998873
No 482
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.12 E-value=0.49 Score=42.87 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=53.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCceecCCCCCChhHHH-HHHHHhcCCccEEEeccCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQE-VIAEMTNGGVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~vv~~~~~~~~~~~-~i~~~~~~~~d~vld~~g~ 236 (341)
+|+|+|+|++|....-.+...|. .|..+++++++.+.+++- |.. +.+..... .+.- .......+.+|++|-|+=+
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~~-~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQAS-LYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcce-eeccCCCCcccccccCEEEEECCH
Confidence 58999999999887766667787 788888887777776653 432 21111100 0000 0000011368999988643
Q ss_pred h---HHHHHHHHHhcCCCcEEEEE
Q 019414 237 I---DNMISAFECVHDGWGVAVLV 257 (341)
Q Consensus 237 ~---~~~~~~~~~l~~~~g~~v~~ 257 (341)
. +.++++...+.++ ..++.+
T Consensus 81 ~~~~~al~~l~~~l~~~-t~vv~l 103 (305)
T PRK05708 81 YDAEPAVASLAHRLAPG-AELLLL 103 (305)
T ss_pred HhHHHHHHHHHhhCCCC-CEEEEE
Confidence 2 2334444555665 555544
No 483
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=93.11 E-value=0.93 Score=43.42 Aligned_cols=104 Identities=17% Similarity=0.356 Sum_probs=61.9
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHhc
Q 019414 150 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~~ 224 (341)
...+++++++||=.|+|. |..++.+++.. +...|++++.++++.+.++ .+|.+.+ .....| ..+....+ .
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~D--~~~~~~~~-~ 318 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKALD--ARKVHEKF-A 318 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeCC--cccccchh-c
Confidence 345678899988887643 44455556554 2349999999999877664 3565432 111111 11111111 1
Q ss_pred CCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 225 GGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 225 ~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
+.||.|+ | |+|. .+.+..+++.|+++ |+++....
T Consensus 319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvystc 380 (444)
T PRK14902 319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYSTC 380 (444)
T ss_pred ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEcC
Confidence 4699986 5 3332 13477788999998 99986543
No 484
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.10 E-value=0.92 Score=38.85 Aligned_cols=46 Identities=30% Similarity=0.372 Sum_probs=37.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHHcC
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS----------KRFEEAKKFG 201 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~----------~~~~~~~~~g 201 (341)
.|.+|+|.|.|.+|+.+++++...|.+.|.+++.+. +..+..++.+
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 578999999999999999999999986666677666 5666665554
No 485
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.10 E-value=0.79 Score=40.82 Aligned_cols=94 Identities=19% Similarity=0.270 Sum_probs=64.5
Q ss_pred hccccchhhhhhhhhhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414 136 ILSCGVSTGLGATLNVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 213 (341)
Q Consensus 136 ~l~~~~~ta~~~l~~~~~~~-~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~ 213 (341)
..||+....+. +++..++. .|.+++|+|- ..+|.-.++++...|+ .|+.+.+... +
T Consensus 138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T~-------------------~- 195 (285)
T PRK10792 138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFTK-------------------N- 195 (285)
T ss_pred CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCCC-------------------C-
Confidence 34555443333 34444443 6999999997 5699999999999998 7777754311 1
Q ss_pred hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414 214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260 (341)
Q Consensus 214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 260 (341)
+.+.++ ..|+++.++|.+..+.. ..++++ ..++.+|..
T Consensus 196 -l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 196 -LRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred -HHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 322232 38999999998776554 678897 899999854
No 486
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.08 E-value=0.83 Score=40.55 Aligned_cols=76 Identities=28% Similarity=0.388 Sum_probs=46.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCce---ecCCCCCChhHHHHHHHHh-cCCccE
Q 019414 158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD---FVNTSEHDRPIQEVIAEMT-NGGVDR 229 (341)
Q Consensus 158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~---vv~~~~~~~~~~~~i~~~~-~~~~d~ 229 (341)
..++|.|+|++|.+.+..+. .|+ +|+.+++++++.+.+ + ..+... ..|..+.+ .+.+.+.+.. .+++|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCCE
Confidence 46788898999999888774 788 888888887665432 2 223321 23443322 1222232221 147999
Q ss_pred EEeccCC
Q 019414 230 SVECTGN 236 (341)
Q Consensus 230 vld~~g~ 236 (341)
++++.|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9998874
No 487
>PLN02928 oxidoreductase family protein
Probab=93.07 E-value=1.1 Score=41.49 Aligned_cols=96 Identities=23% Similarity=0.312 Sum_probs=57.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-----CceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVDRS 230 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~i~~~~~~~~d~v 230 (341)
.|.++.|+|.|.+|..+++.++.+|. +|++.+++..+... ..++ ....++......++.+.+. ..|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCEE
Confidence 47899999999999999999999999 99999876332111 1110 0001100000001333332 26888
Q ss_pred EeccCC-hHH----HHHHHHHhcCCCcEEEEEcc
Q 019414 231 VECTGN-IDN----MISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 231 ld~~g~-~~~----~~~~~~~l~~~~g~~v~~g~ 259 (341)
+.++.. +++ -...+..++++ ..++.++-
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 877652 221 13567778886 77777763
No 488
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.03 E-value=1.3 Score=40.31 Aligned_cols=88 Identities=24% Similarity=0.377 Sum_probs=59.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEE-ecc
Q 019414 156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-ECT 234 (341)
Q Consensus 156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl-d~~ 234 (341)
.|.++.|+|.|.+|++.+++++.+|. +|+.-+++.. .+..++.++.++- +.+.+. ..|++. .|-
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~~--------l~ell~-----~sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYVD--------LDELLA-----ESDIISLHCP 209 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceecc--------HHHHHH-----hCCEEEEeCC
Confidence 48899999999999999999998898 8888887765 4444445554321 222222 267764 555
Q ss_pred CChHHH----HHHHHHhcCCCcEEEEEcc
Q 019414 235 GNIDNM----ISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 235 g~~~~~----~~~~~~l~~~~g~~v~~g~ 259 (341)
.++++. ...++.++++ +.+|-++-
T Consensus 210 lt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 210 LTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 454432 2567778886 77777764
No 489
>PRK05855 short chain dehydrogenase; Validated
Probab=93.03 E-value=0.55 Score=46.30 Aligned_cols=79 Identities=23% Similarity=0.278 Sum_probs=51.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~ 225 (341)
.+.++||+|+ |++|.+.++-+...|+ +|+.++++.++.+.+ ++.|... ..|..+.+ ...+.+.+... +
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD-AMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence 4578999987 9999999888888999 788888888775543 2334321 23443322 12222322221 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|++|++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999998874
No 490
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.02 E-value=0.75 Score=39.62 Aligned_cols=78 Identities=28% Similarity=0.348 Sum_probs=45.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHH----HHHcCCce-ec--CCCCCChhHHHHHHHHhc--C
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 225 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~----~~~~g~~~-vv--~~~~~~~~~~~~i~~~~~--~ 225 (341)
+.++||+|+ |.+|...+..+...|+ +|+++.++.. +.+. ++..+... .+ |..+.+ .+.+.+.+... +
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 82 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEFG 82 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 468999987 9999999999988899 6655555443 2221 22233322 22 333322 12222333222 3
Q ss_pred CccEEEeccCC
Q 019414 226 GVDRSVECTGN 236 (341)
Q Consensus 226 ~~d~vld~~g~ 236 (341)
++|.++.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (248)
T PRK05557 83 GVDILVNNAGI 93 (248)
T ss_pred CCCEEEECCCc
Confidence 68999998763
No 491
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.01 E-value=0.33 Score=42.71 Aligned_cols=73 Identities=19% Similarity=0.114 Sum_probs=49.7
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414 159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 236 (341)
Q Consensus 159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 236 (341)
+|||+|+.+-|...+..+...|. +|+++.+++.+.+.+.+.|...++.-. -+ -. .+.++..+ ++|+|+|++..
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~-l~--~~-~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA-LD--PQ-ELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECC-CC--HH-HHHHHHHhcCCCEEEEcCCH
Confidence 68999874459888877777897 888888888887777777654443221 11 22 24444444 89999998763
No 492
>PRK03612 spermidine synthase; Provisional
Probab=93.00 E-value=0.85 Score=44.59 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=61.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-Cce----ecC-----CCCCChhHHHHHHHHhc
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTD----FVN-----TSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~~----vv~-----~~~~~~~~~~~i~~~~~ 224 (341)
++.++||++|+| .|..+..+++.-+.++|++++.+++-.+.+++.. ... ..+ ....| ..+.+++ .+
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~D--a~~~l~~-~~ 371 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDD--AFNWLRK-LA 371 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEECh--HHHHHHh-CC
Confidence 456789999875 3556667777544469999999999999988721 100 010 01112 3333332 34
Q ss_pred CCccEEE-eccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 019414 225 GGVDRSV-ECTGN----------IDNMISAFECVHDGWGVAVLVG 258 (341)
Q Consensus 225 ~~~d~vl-d~~g~----------~~~~~~~~~~l~~~~g~~v~~g 258 (341)
+++|+|+ |.... .+.++.+.+.|+|+ |.++...
T Consensus 372 ~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 372 EKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 5899987 43211 13467888999998 9988754
No 493
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.00 E-value=0.82 Score=41.35 Aligned_cols=34 Identities=32% Similarity=0.330 Sum_probs=29.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 190 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~ 190 (341)
.+.++||+|+ +++|++.++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 3678999987 8999999999988999 78888776
No 494
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=92.96 E-value=2.9 Score=36.92 Aligned_cols=102 Identities=20% Similarity=0.298 Sum_probs=62.2
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHhcC
Q 019414 151 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG 225 (341)
Q Consensus 151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~~~ 225 (341)
...+++|++||=.|+|+ |..++.++...+ ...|++++.++++.+.++ .+|...+. ....+ .. .+.. ..+
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~-~~~~D--~~-~~~~-~~~ 139 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVA-VTNFD--GR-VFGA-AVP 139 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEE-EecCC--HH-Hhhh-hcc
Confidence 34678999988887654 444555555543 238999999999977654 45654321 11112 11 1111 123
Q ss_pred CccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414 226 GVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 259 (341)
Q Consensus 226 ~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~ 259 (341)
.||.|| | |+|. .+.+..+++.++++ |+++....
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc 200 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC 200 (264)
T ss_pred CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 599986 5 3432 13667788899997 99986654
No 495
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=92.94 E-value=1 Score=32.16 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=29.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019414 155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 189 (341)
Q Consensus 155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~ 189 (341)
-++.+++|+|.|.+|..+++.+...+..++...++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 35678999999999999999999886557777765
No 496
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=92.94 E-value=0.68 Score=40.25 Aligned_cols=76 Identities=22% Similarity=0.269 Sum_probs=47.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414 159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 228 (341)
Q Consensus 159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d 228 (341)
+++|+|+ |++|...++.+...|+ +|+.+.+++++.+. +++.+... ..|..+.+ .+.+.+.+... +++|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGFD 79 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCCC
Confidence 5889987 9999999988888999 88888887665432 22334321 22333322 12222322221 2689
Q ss_pred EEEeccCC
Q 019414 229 RSVECTGN 236 (341)
Q Consensus 229 ~vld~~g~ 236 (341)
++|++.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99998864
No 497
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.92 E-value=0.82 Score=40.11 Aligned_cols=78 Identities=17% Similarity=0.315 Sum_probs=46.4
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-HHc-CCc---eecCCCCCChhHHHHHHHHhc
Q 019414 156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVT---DFVNTSEHDRPIQEVIAEMTN 224 (341)
Q Consensus 156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~---~~~~~~-~~~-g~~---~vv~~~~~~~~~~~~i~~~~~ 224 (341)
.+.++||+|+ +++|.+.++-+...|+ +|+.+.++. ++.+.+ +++ +.. ...|..+.+ ...+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDE-EITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHH-HHHHHHHHHHH
Confidence 3678999986 5999998888888999 777776543 333332 333 211 123443332 13333333322
Q ss_pred --CCccEEEeccC
Q 019414 225 --GGVDRSVECTG 235 (341)
Q Consensus 225 --~~~d~vld~~g 235 (341)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999998876
No 498
>PRK07775 short chain dehydrogenase; Provisional
Probab=92.92 E-value=1.2 Score=39.47 Aligned_cols=78 Identities=21% Similarity=0.273 Sum_probs=47.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-e--cCCCCCChhHHHHHHHHh--cCC
Q 019414 157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 226 (341)
Q Consensus 157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v--v~~~~~~~~~~~~i~~~~--~~~ 226 (341)
..++||+|+ |.+|...++-+...|+ +|+++.++.++.+.. +..+... . .|..+.+ .+.+.+.... -++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD-SVKSFVAQAEEALGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHhcCC
Confidence 357899987 9999999988888899 788877776654332 2234322 1 2333221 1222222221 136
Q ss_pred ccEEEeccCC
Q 019414 227 VDRSVECTGN 236 (341)
Q Consensus 227 ~d~vld~~g~ 236 (341)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 499
>PRK14982 acyl-ACP reductase; Provisional
Probab=92.91 E-value=0.64 Score=42.60 Aligned_cols=93 Identities=20% Similarity=0.265 Sum_probs=59.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 232 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~-~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld 232 (341)
.+.+|+|+|+ |.+|..+++.+. ..|..+++.+.+++++.+.+. +++...+. + +. +.. ...|+|+.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~--l~----~~l-~~aDiVv~ 221 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----S--LE----EAL-PEADIVVW 221 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----h--HH----HHH-ccCCEEEE
Confidence 5689999998 999999877775 457668999988887766543 33311111 0 22 211 24899999
Q ss_pred ccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414 233 CTGNIDNMISAFECVHDGWGVAVLVGVPS 261 (341)
Q Consensus 233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 261 (341)
+.+.++.+..--..+.+. -.++.++.+.
T Consensus 222 ~ts~~~~~~I~~~~l~~~-~~viDiAvPR 249 (340)
T PRK14982 222 VASMPKGVEIDPETLKKP-CLMIDGGYPK 249 (340)
T ss_pred CCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence 987654431112345665 7778887654
No 500
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.91 E-value=0.83 Score=41.28 Aligned_cols=78 Identities=24% Similarity=0.289 Sum_probs=46.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhH-H---HHHHcCCcee---cCCCCCC--hhHHHHHHHHhc
Q 019414 156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRF-E---EAKKFGVTDF---VNTSEHD--RPIQEVIAEMTN 224 (341)
Q Consensus 156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~-~---~~~~~g~~~v---v~~~~~~--~~~~~~i~~~~~ 224 (341)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++. ++. + .+++.|.... .|..+.+ ..+.+.+.+ .
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 3578999987 9999999888888899 777776542 222 2 2333343221 2332221 012222223 2
Q ss_pred CCccEEEeccCC
Q 019414 225 GGVDRSVECTGN 236 (341)
Q Consensus 225 ~~~d~vld~~g~ 236 (341)
+++|++|++.|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 479999998774
Done!