BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019418
(341 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 193/321 (60%), Positives = 207/321 (64%), Gaps = 78/321 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG-VSRRSDYRVLVTGLPS 119
AI GRDGY FDG RLRVE AHGGR HSSS+DRYS SG SRG V RR+DYRVLVTGLPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSR--SGSSRGGVPRRTDYRVLVTGLPS 118
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHM R AG + FS
Sbjct: 119 SASWQDLKDHM-----------------------------------RRAGDVC----FSE 139
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R GM GIVDYT+YDDMKYAIRKLD SEFRNA
Sbjct: 140 VFRDR-------------------------GGMAGIVDYTNYDDMKYAIRKLDDSEFRNA 174
Query: 240 FSRSYVRVREYDSRRSYSRSP---SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR--- 293
FSR+YVRV+EYDSR SYSRSP SR YSRS SRSPY R RS SRS S S
Sbjct: 175 FSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRSPSRSPYRGRGRSQSRSRSRSRSRSRSY 234
Query: 294 -----SYSPRGKYSRRSPSLS 309
S SPR K+SRRS S+S
Sbjct: 235 SGRSTSLSPRHKHSRRSRSVS 255
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 187/320 (58%), Positives = 202/320 (63%), Gaps = 83/320 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY FDG RLRVE AHGGR HSSS+DRYS SG SR D+ VLVTGLPSS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSR--SGSSR------DFAVLVTGLPSS 112
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRR G+V + E+
Sbjct: 113 ASWQDLKDHMRR------------------------AGDVCFSEV--------------- 133
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
FR+ GM GIVDYT+YDDMKYAIRKLD SEFRNAF
Sbjct: 134 --------------------FRDR-----GGMAGIVDYTNYDDMKYAIRKLDDSEFRNAF 168
Query: 241 SRSYVRVREYDSRRSYSRSP---SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---- 293
SR+YVRV+EYDSR SYSRSP SR YSRS SRSPY R RS SRS S S
Sbjct: 169 SRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRSPSRSPYRGRGRSQSRSRSRSRSRSRSYS 228
Query: 294 ----SYSPRGKYSRRSPSLS 309
S SPR K+SRRS S+S
Sbjct: 229 GRSTSLSPRHKHSRRSRSVS 248
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 201/332 (60%), Positives = 215/332 (64%), Gaps = 73/332 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REV+DLFYKYGPIV++DLKIPPRPPGYAF+EFED RDAED
Sbjct: 38 MSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAED 97
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPS 119
AIRGRDGYNFDG RLRVELAHGGRRHSS DRYSSYS SRRSDYRVLVTGLPS
Sbjct: 98 AIRGRDGYNFDGCRLRVELAHGGRRHSSPGDRYSSYSGRSGSRGPSRRSDYRVLVTGLPS 157
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHM R AG + FS
Sbjct: 158 SASWQDLKDHM-----------------------------------RRAGDVC----FSQ 178
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R GMTGIVDYT+YDDMK+AI+KLD SEFRNA
Sbjct: 179 VFRDR-------------------------GGMTGIVDYTNYDDMKHAIKKLDDSEFRNA 213
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FSRSYVRVREYDSRRSYSRSPS PY RSRS SR+RS W SRS SP
Sbjct: 214 FSRSYVRVREYDSRRSYSRSPSCGPY---DRSRSRSRSRTRSRHSDW-----SRSKSPGA 265
Query: 300 KYSRRSPSLSPARSASQRSPSGSPPRSFSRSG 331
KY RS S+SP RS S RS +GS PRS S G
Sbjct: 266 KYHSRSLSVSPGRSVSPRSHAGSSPRSSSNLG 297
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 170/252 (67%), Gaps = 66/252 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGY F+EFED RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLP 118
AIRGRDGYNFDG RLRVELAHGGR SS+ DRYSSYSS G R GVSRRS+YRVLV+GLP
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFS 178
SSASWQDLKDHMRR G+V + ++
Sbjct: 121 SSASWQDLKDHMRR------------------------AGDVCFSQV------------- 143
Query: 179 CLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
FR+S +G TGIVDYT+YDDMKYAIRKLD SEFRN
Sbjct: 144 ----------------------FRDS-----SGTTGIVDYTNYDDMKYAIRKLDDSEFRN 176
Query: 239 AFSRSYVRVREY 250
AFSR Y+RV+EY
Sbjct: 177 AFSRGYIRVKEY 188
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 200/310 (64%), Gaps = 67/310 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS W ++++ R G FS
Sbjct: 152 SAS---------------------------------------WQDLKDHMRKAGHVCFSQ 172
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R G+TGIVDYT+YDD+KYAIRKLD SEFRNA
Sbjct: 173 VFRER-------------------------GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA 207
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FSRSY+RVREYD S S S S SRSRSPY SRSRS S S SYS RSRS SP+
Sbjct: 208 FSRSYIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKA 265
Query: 300 KYSRRSPSLS 309
K+SRRS SLS
Sbjct: 266 KHSRRSFSLS 275
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 200/310 (64%), Gaps = 67/310 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS W ++++ R G FS
Sbjct: 121 SAS---------------------------------------WQDLKDHMRKAGHVCFSQ 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R G+TGIVDYT+YDD+KYAIRKLD SEFRNA
Sbjct: 142 VFRER-------------------------GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA 176
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FSRSY+RVREYD S S S S SRSRSPY SRSRS S S SYS RSRS SP+
Sbjct: 177 FSRSYIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKA 234
Query: 300 KYSRRSPSLS 309
K+SRRS SLS
Sbjct: 235 KHSRRSFSLS 244
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/306 (59%), Positives = 200/306 (65%), Gaps = 67/306 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASW Q +D +R+AG + FS
Sbjct: 121 SASW----------------QDLKD-------------------HMRKAGHVC----FSQ 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R G+TGIVDYT+YDD+KYAIRKLD SEFRNA
Sbjct: 142 VFRER-------------------------GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA 176
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FSRSY+RVREYD S S S S SRSRSPY SRSRS S S SYS RSRS SP+
Sbjct: 177 FSRSYIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKA 234
Query: 300 KYSRRS 305
K+SRRS
Sbjct: 235 KHSRRS 240
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 192/313 (61%), Gaps = 67/313 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+G R +YRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHMR+A G+V + ++ GR
Sbjct: 147 SASWQDLKDHMRKA------------------------GDVCFSQVFHDGR--------- 173
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 174 -------------------------------GTTGIVDYTNYDDMKYAIKKLDDSEFRNA 202
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FS+SYVRVREYDSRR SRSP R P +SR RS S SRS SP+G
Sbjct: 203 FSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS-RSRSRSRSHSRSYSPGHSRSKSPKG 260
Query: 300 KYSRRSPSLSPAR 312
K S+RSP+ SPA+
Sbjct: 261 KSSQRSPAKSPAK 273
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 192/313 (61%), Gaps = 67/313 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 102 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 161
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+G R +YRV+V GLPS
Sbjct: 162 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 221
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHMR+A G+V + ++ GR
Sbjct: 222 SASWQDLKDHMRKA------------------------GDVCFSQVFHDGR--------- 248
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 249 -------------------------------GTTGIVDYTNYDDMKYAIKKLDDSEFRNA 277
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FS+SYVRVREYDSRR SRSP R P +SR RS S SRS SP+G
Sbjct: 278 FSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS-RSRSRSRSHSRSYSPGHSRSKSPKG 335
Query: 300 KYSRRSPSLSPAR 312
K S+RSP+ SPA+
Sbjct: 336 KSSQRSPAKSPAK 348
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 165/301 (54%), Positives = 182/301 (60%), Gaps = 86/301 (28%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 190 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 249
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRD YNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YRV+VTGLPSS
Sbjct: 250 AICGRDRYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 309
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG
Sbjct: 310 ASWQDLKDHMRRA------------------------GDVCFSDVYREAG---------- 335
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
GIVDYT+Y+DMKYAIRKLD SEFRNA
Sbjct: 336 -------------------------------ATVGIVDYTTYEDMKYAIRKLDDSEFRNA 364
Query: 240 FSRSYVRVREYDSR--------------------RSYSRSPSRSPYYSRSRSRSPYYSRS 279
FSR+Y+RVREYD R +S SRSPS S SRSR+P S S
Sbjct: 365 FSRAYIRVREYDDRSRSRSRSYSRSRSYSRSRSPKSVSRSPSPVDERSISRSRTPVSSPS 424
Query: 280 R 280
R
Sbjct: 425 R 425
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 192/313 (61%), Gaps = 67/313 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+G R +YRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHMR+A G+V + ++ GR
Sbjct: 147 SASWQDLKDHMRKA------------------------GDVCFSQVFHDGR--------- 173
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 174 -------------------------------GTTGIVDYTNYDDMKYAIKKLDDSEFRNA 202
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FS+SYVRVREYDSRR SRSP R P +SR RS S SRS SP+G
Sbjct: 203 FSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS-RSRSRSRSHSRSYSPGHSRSKSPKG 260
Query: 300 KYSRRSPSLSPAR 312
K S+RSP+ SPA+
Sbjct: 261 KSSQRSPAKSPAK 273
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 172/321 (53%), Positives = 198/321 (61%), Gaps = 70/321 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR HSSS DR++S+S+G R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHMR+A G+V + ++ GR
Sbjct: 121 SASWQDLKDHMRKA------------------------GDVCFSQVFHDGR--------- 147
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 148 -------------------------------GTTGIVDYTNYDDMKYAIKKLDDSEFRNA 176
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FS+ YVRVREYDSRR SRSPS P +SR RS RS+S SP+G
Sbjct: 177 FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRS-----YSRSRSRSHSYSRDRSQSKSPKG 231
Query: 300 KYSRRSPSLSPARSASQRSPS 320
K S+RSP+ SP +SQRSP+
Sbjct: 232 KSSQRSPAKSPKGKSSQRSPA 252
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 172/321 (53%), Positives = 198/321 (61%), Gaps = 70/321 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR HSSS DR++S+S+G R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHMR+A G+V + ++ GR
Sbjct: 121 SASWQDLKDHMRKA------------------------GDVCFSQVFHDGR--------- 147
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 148 -------------------------------GTTGIVDYTNYDDMKYAIKKLDDSEFRNA 176
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FS+ YVRVREYDSRR SRSPS P +SR RS RS+S SP+G
Sbjct: 177 FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRS-----YSRSRSRSHSYSRDRSQSKSPKG 231
Query: 300 KYSRRSPSLSPARSASQRSPS 320
K S+RSP+ SP +SQRSP+
Sbjct: 232 KSSQRSPAKSPKGKSSQRSPA 252
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/248 (61%), Positives = 166/248 (66%), Gaps = 65/248 (26%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR+SRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFE+ RDAEDAI
Sbjct: 2 SRASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS-RGVSRRSDYRVLVTGLPSSA 121
RGRDGYNFDG RLRVELAHGGRRHSS +D YSSYS RG S+RSDYRVLVTGLPSSA
Sbjct: 62 RGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSA 121
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLY 181
SWQDLKDHM R AG + FS ++
Sbjct: 122 SWQDLKDHM-----------------------------------RRAGDVC----FSQVF 142
Query: 182 RFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 241
R R GMTGIVDYT+YDDMKYAI+KLD SEFRNAFS
Sbjct: 143 RDR-------------------------GGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFS 177
Query: 242 RSYVRVRE 249
R+Y+RVRE
Sbjct: 178 RAYIRVRE 185
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/297 (57%), Positives = 189/297 (63%), Gaps = 67/297 (22%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS W ++++ R G FS
Sbjct: 152 SAS---------------------------------------WQDLKDHMRKAGHVCFSQ 172
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R G+TGIVDYT+YDD+KYAIRKLD SEFRNA
Sbjct: 173 VFRER-------------------------GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA 207
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 296
FSRSY+RVREYD S S S S SRSRSPY SRSRS S S SYS RSR ++
Sbjct: 208 FSRSYIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 187/293 (63%), Gaps = 74/293 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 124 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 153
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 154 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 178
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS 292
FSR+Y+RVREYD+R S S SR+P YSRSRSP +S S SP S
Sbjct: 179 FSRAYIRVREYDARSRSRSR-------SHSYSRTPSYSRSRSP-KSVSQSPSS 223
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/297 (57%), Positives = 189/297 (63%), Gaps = 67/297 (22%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS W ++++ R G FS
Sbjct: 152 SAS---------------------------------------WQDLKDHMRKAGHVCFSQ 172
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R G+TGIVDYT+YDD+KYAIRKLD SEFRNA
Sbjct: 173 VFRER-------------------------GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA 207
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 296
FSRSY+RVREYD S S S S SRSRSPY SRSRS S S SYS RSR ++
Sbjct: 208 FSRSYIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/297 (57%), Positives = 189/297 (63%), Gaps = 67/297 (22%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS W ++++ R G FS
Sbjct: 152 SAS---------------------------------------WQDLKDHMRKAGHVCFSQ 172
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R G+TGIVDYT+YDD+KYAIRKLD SEFRNA
Sbjct: 173 VFRER-------------------------GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA 207
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 296
FSRSY+RVREYD S S S S SRSRSPY SRSRS S S SYS RSR ++
Sbjct: 208 FSRSYIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/253 (57%), Positives = 164/253 (64%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M R+S T+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDGYRLRVELAHGG+ S S DR SS+SSG GVSRRS+YRV+V GLPSS
Sbjct: 61 AIYGRDGYDFDGYRLRVELAHGGKAQSYSYDRPSSFSSGRRGGVSRRSEYRVMVDGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAG---------- 146
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
GIVDYT+YDDMKYAIRKLD +EFRNA
Sbjct: 147 -------------------------------ATVGIVDYTNYDDMKYAIRKLDGTEFRNA 175
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 176 FSRAYIRVREYDA 188
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/253 (58%), Positives = 163/253 (64%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M +S T+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MGRTNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S +R SYSSG GVSRRS+YRVLV GLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYQYERPRSYSSGRRGGVSRRSEYRVLVDGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG I+G
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGAIVG------ 150
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD +EFRNA
Sbjct: 151 -----------------------------------IVDYTNYDDMKYAIRKLDGTEFRNA 175
Query: 240 FSRSYVRVREYDS 252
FSRSY+RVREYD+
Sbjct: 176 FSRSYIRVREYDA 188
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/261 (59%), Positives = 175/261 (67%), Gaps = 66/261 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R+REVEDLFYK+GPIVDI+LKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRSSRTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIR RDGY FDG+RLRVELAHGGR +SSS+DRYSSYSSG VS+ S+YRVLVTGLP S
Sbjct: 61 AIRYRDGYKFDGFRLRVELAHGGRGYSSSVDRYSSYSSGSRG-VSKHSEYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHM R AG + FS +
Sbjct: 120 ASWQDLKDHM-----------------------------------RRAGDVC----FSQV 140
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+R R GMTGIV+YT+Y+DMKYAIRKLD SEFRNAF
Sbjct: 141 FRDR-------------------------GGMTGIVEYTNYEDMKYAIRKLDDSEFRNAF 175
Query: 241 SRSYVRVREYDSRRSYSRSPS 261
S +Y+RVREYD RR Y+RSPS
Sbjct: 176 SWAYIRVREYD-RRRYTRSPS 195
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 124 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 153
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 154 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 178
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 179 FSRAYIRVREYDA 191
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 124 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 153
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 154 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 178
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 179 FSRAYIRVREYDA 191
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 124 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 153
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 154 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 178
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 179 FSRAYIRVREYDA 191
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/255 (55%), Positives = 161/255 (63%), Gaps = 69/255 (27%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RTLYVGNLPGD R E+EDLFYKYG I+D+DLK+PPRPPGY F+EFED RDAED
Sbjct: 1 MSSRMTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG-----VSRRSDYRVLVT 115
AIRGRDGYNFDG+R+RVE AHGGRR SSS+ R SSYSS V+R +DYRVLVT
Sbjct: 61 AIRGRDGYNFDGHRIRVEFAHGGRRTSSSLGRPSSYSSIAGGRGGRGGVTRHTDYRVLVT 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
GLPSSASWQDLKDHMRRA G+V + E+
Sbjct: 121 GLPSSASWQDLKDHMRRA------------------------GDVCYAEV---------- 146
Query: 176 MFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSE 235
FR+S G G VDYT+ +DMKYAIRKLD SE
Sbjct: 147 -------------------------FRDS-----NGTRGTVDYTNLEDMKYAIRKLDDSE 176
Query: 236 FRNAFSRSYVRVREY 250
FRNAFSRSY++V+EY
Sbjct: 177 FRNAFSRSYIQVKEY 191
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 150
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 151 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 175
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 176 FSRAYIRVREYDA 188
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 161/252 (63%), Gaps = 68/252 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 184
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMR A G+V + E+ RE G
Sbjct: 185 ASWQDLKDHMRNA------------------------GDVCYSEVYREGG---------- 210
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G GIVDYT+YDDMKYAIRKLD SEF+NA
Sbjct: 211 -------------------------------GTIGIVDYTNYDDMKYAIRKLDDSEFKNA 239
Query: 240 FSRSYVRVREYD 251
FS++Y+RV+EYD
Sbjct: 240 FSKAYIRVKEYD 251
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/254 (56%), Positives = 162/254 (63%), Gaps = 68/254 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 184
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMR A G+V + E+ RE G
Sbjct: 185 ASWQDLKDHMRNA------------------------GDVCYSEVYREGG---------- 210
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G GIVDYT+YDDMKYAIRKLD SEF+NA
Sbjct: 211 -------------------------------GTIGIVDYTNYDDMKYAIRKLDDSEFKNA 239
Query: 240 FSRSYVRVREYDSR 253
FS++Y+RV+EYD +
Sbjct: 240 FSKAYIRVKEYDGK 253
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 124 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 153
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 154 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 178
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 179 FSRAYIRVREYDA 191
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 150
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 151 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 175
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 176 FSRAYIRVREYDA 188
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 150
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 151 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 175
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 176 FSRAYIRVREYDA 188
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 66/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 150
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 151 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 175
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 176 FSRAYIRVREYDA 188
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/313 (51%), Positives = 188/313 (60%), Gaps = 67/313 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+G R +YRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASW Q +D +R+AG +
Sbjct: 147 SASW----------------QDLKD-------------------HMRKAGDVC------- 164
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
F + +H+ G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 165 ---------------------FSQVFHD-GRGTTGIVDYTNYDDMKYAIKKLDDSEFRNA 202
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 299
FS+SYVRVREYDSRR SRSP R P +SR RS S SRS SP+G
Sbjct: 203 FSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS-RSRSRSRSHSRSYSPGHSRSKSPKG 260
Query: 300 KYSRRSPSLSPAR 312
K S+RSP+ SPA+
Sbjct: 261 KSSQRSPAKSPAK 273
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 161/252 (63%), Gaps = 68/252 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMR A G+V + E+ RE G
Sbjct: 119 ASWQDLKDHMRNA------------------------GDVCYSEVYREGG---------- 144
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G GIVDYT+YDDMKYAIRKLD SEF+NA
Sbjct: 145 -------------------------------GTIGIVDYTNYDDMKYAIRKLDDSEFKNA 173
Query: 240 FSRSYVRVREYD 251
FS++Y+RV+EYD
Sbjct: 174 FSKAYIRVKEYD 185
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 162/254 (63%), Gaps = 66/254 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 24 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 83
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR+GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 84 AIYGRNGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 141
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRA G FS +
Sbjct: 142 ASWQDLKDHMRRA---------------------------------------GDVCFSDV 162
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
YR GIVDYT+Y+DMK AIRKLD SEFRNAF
Sbjct: 163 YRE-------------------------GGATIGIVDYTNYEDMKQAIRKLDDSEFRNAF 197
Query: 241 SRSYVRVREYDSRR 254
SR+Y+RVREYDS +
Sbjct: 198 SRAYIRVREYDSAK 211
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 166/252 (65%), Gaps = 65/252 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AI+ RDGYNFDG+RLRVELAHGGR +SSS+DRYSSYS G R DYRVLVTGLP
Sbjct: 61 AIQYRDGYNFDGFRLRVELAHGGRGYSSSVDRYSSYSGGSGSRGVSRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDHM R+AG + FS
Sbjct: 121 SASWQDLKDHM-----------------------------------RKAGDVC----FSQ 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R R GMTGIVDYT+YDDMKYAIRKLD SEFRNA
Sbjct: 142 VFRER-------------------------GGMTGIVDYTNYDDMKYAIRKLDDSEFRNA 176
Query: 240 FSRSYVRVREYD 251
FSR+++RVREYD
Sbjct: 177 FSRAFIRVREYD 188
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/251 (60%), Positives = 165/251 (65%), Gaps = 64/251 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SSS+D YSSYSS G+SR S+YRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHM R AG + FS +
Sbjct: 121 ASWQDLKDHM-----------------------------------RRAGDVC----FSQV 141
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+R R GMTGIVDYT+YDDMKYAIRKLD S F+N F
Sbjct: 142 FRGR-------------------------GGMTGIVDYTNYDDMKYAIRKLDDSLFKNQF 176
Query: 241 SRSYVRVREYD 251
SR+Y+RVREY+
Sbjct: 177 SRAYIRVREYE 187
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/252 (57%), Positives = 160/252 (63%), Gaps = 66/252 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRA G FS +
Sbjct: 119 ASWQDLKDHMRRA---------------------------------------GDVCFSDV 139
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
YR GIVDYT+Y+DMK AIRKLD SEFRNAF
Sbjct: 140 YRE-------------------------GGATIGIVDYTNYEDMKQAIRKLDDSEFRNAF 174
Query: 241 SRSYVRVREYDS 252
SR+Y+RVREYDS
Sbjct: 175 SRAYIRVREYDS 186
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/252 (57%), Positives = 160/252 (63%), Gaps = 66/252 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRA G FS +
Sbjct: 119 ASWQDLKDHMRRA---------------------------------------GDVCFSDV 139
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
YR GIVDYT+Y+DMK AIRKLD SEFRNAF
Sbjct: 140 YRE-------------------------GGATIGIVDYTNYEDMKQAIRKLDDSEFRNAF 174
Query: 241 SRSYVRVREYDS 252
SR+Y+RVREYDS
Sbjct: 175 SRAYIRVREYDS 186
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 165/251 (65%), Gaps = 64/251 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SSS+D YSSYSS G+SR S+YRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDH +R AG + FS +
Sbjct: 121 ASWQDLKDH-----------------------------------MRRAGDVC----FSQV 141
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+R R GMTGIVDYT+YDDMKYAIRKLD S F+N F
Sbjct: 142 FRGR-------------------------GGMTGIVDYTNYDDMKYAIRKLDDSLFKNQF 176
Query: 241 SRSYVRVREYD 251
SR+Y+RVREY+
Sbjct: 177 SRAYIRVREYE 187
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 161/252 (63%), Gaps = 68/252 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMR A G+V + E+ RE G
Sbjct: 119 ASWQDLKDHMRNA------------------------GDVCYSEVYREGG---------- 144
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G GIVDYT+YDDMKYAIRKLD SEF+NA
Sbjct: 145 -------------------------------GTIGIVDYTNYDDMKYAIRKLDDSEFKNA 173
Query: 240 FSRSYVRVREYD 251
FS++Y+RV+EYD
Sbjct: 174 FSKAYIRVKEYD 185
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/332 (49%), Positives = 189/332 (56%), Gaps = 79/332 (23%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRI 171
VLVTGLPSSASWQDLKDHMR+ GG+V + ++ R
Sbjct: 121 VLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYRDAR- 155
Query: 172 LGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKL 231
G TG+VDYT Y+DMKYA++KL
Sbjct: 156 ---------------------------------------GTTGVVDYTCYEDMKYALKKL 176
Query: 232 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 291
D +EFRNAFS YVRVREYDSR+ SRSP RS S+S R
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSR 230
Query: 292 SRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 323
SRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 231 SRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/251 (60%), Positives = 165/251 (65%), Gaps = 64/251 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SSS+D YSSYSS G+SR S+YRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHM R AG + FS +
Sbjct: 121 ASWQDLKDHM-----------------------------------RRAGDVC----FSQV 141
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+R R GMTGIVDYT+YDDMKYAIRKLD S F+N F
Sbjct: 142 FRGR-------------------------GGMTGIVDYTNYDDMKYAIRKLDDSLFKNQF 176
Query: 241 SRSYVRVREYD 251
SR+Y+RVREY+
Sbjct: 177 SRAYIRVREYE 187
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/332 (49%), Positives = 189/332 (56%), Gaps = 79/332 (23%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRI 171
VLVTGLPSSASWQDLKDHMR+ GG+V + ++ R
Sbjct: 121 VLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYRDAR- 155
Query: 172 LGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKL 231
G TG+VDYT Y+DMKYA++KL
Sbjct: 156 ---------------------------------------GTTGVVDYTCYEDMKYALKKL 176
Query: 232 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 291
D +EFRNAFS YVRVREYDSR+ SRSP RS S+S R
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSR 230
Query: 292 SRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 323
SRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 231 SRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 164/336 (48%), Positives = 189/336 (56%), Gaps = 83/336 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S++RVLVTGLPSSASWQDLKDHMR+ GG+V + ++
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYR 156
Query: 168 AGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYA 227
R G TG+VDYT Y+DMKYA
Sbjct: 157 DAR----------------------------------------GTTGVVDYTCYEDMKYA 176
Query: 228 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 287
++KLD +EFRNAFS YVRVREYDSR+ SRSP RS S+S
Sbjct: 177 LKKLDDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSR 230
Query: 288 YSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 323
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 231 SRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 164/336 (48%), Positives = 189/336 (56%), Gaps = 83/336 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S++RVLVTGLPSSASWQDLKDHMR+ GG+V + ++
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYR 156
Query: 168 AGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYA 227
R G TG+VDYT Y+DMKYA
Sbjct: 157 DAR----------------------------------------GTTGVVDYTCYEDMKYA 176
Query: 228 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 287
++KLD +EFRNAFS YVRVREYDSR+ SRSP RS S+S
Sbjct: 177 LKKLDDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSR 230
Query: 288 YSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 323
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 231 SRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/250 (58%), Positives = 161/250 (64%), Gaps = 65/250 (26%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR+SRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED DA+ AI
Sbjct: 2 SRASRTLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAI 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSA 121
RG DGYNFD RLRVELAHGGRRHSS +DRYSSYS + SDYRVLV+GLPSSA
Sbjct: 62 RGLDGYNFDACRLRVELAHGGRRHSSPVDRYSSYSGSSGSRGPPKHSDYRVLVSGLPSSA 121
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLY 181
SWQDLKDHM R AG + FS ++
Sbjct: 122 SWQDLKDHM-----------------------------------RRAGDVC----FSQVF 142
Query: 182 RFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 241
R R GMTGIVDYT+YDDMKYAI+KLD SEFRNAFS
Sbjct: 143 RDR-------------------------GGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFS 177
Query: 242 RSYVRVREYD 251
R+Y+RVREYD
Sbjct: 178 RAYIRVREYD 187
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/336 (48%), Positives = 189/336 (56%), Gaps = 83/336 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S++RVLVTGLPSSASWQDLKDHMR+ GG+V + ++
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYR 156
Query: 168 AGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYA 227
R G TG+VDYT Y+DMKYA
Sbjct: 157 DAR----------------------------------------GTTGVVDYTCYEDMKYA 176
Query: 228 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 287
++KLD +EFRNAFS YVRVREYDSR+ SRSP RS S+S
Sbjct: 177 LKKLDDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSR 230
Query: 288 YSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 323
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 231 SRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/269 (52%), Positives = 161/269 (59%), Gaps = 74/269 (27%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRI 171
VLVTGLPSSASWQDLKDHMR+ GG+V + ++ R
Sbjct: 121 VLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYRDAR- 155
Query: 172 LGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKL 231
G TG+VDYT Y+DMKYA++KL
Sbjct: 156 ---------------------------------------GTTGVVDYTCYEDMKYALKKL 176
Query: 232 DRSEFRNAFSRSYVRVREYDSRRSYSRSP 260
D +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/261 (58%), Positives = 175/261 (67%), Gaps = 66/261 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD RMREVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR SSS+DRYSS +G SR SRRS YRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSSYTG-SRAPSRRSAYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDH +R+AG + FS +
Sbjct: 120 ASWQDLKDH-----------------------------------MRKAGDVC----FSEV 140
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+R R M+G+VDY++YDDMKYAIRKLD +EFRNAF
Sbjct: 141 FRDR-------------------------GRMSGVVDYSNYDDMKYAIRKLDDTEFRNAF 175
Query: 241 SRSYVRVREYDSRRSYSRSPS 261
SR+Y+RVREY+S RS SRSP+
Sbjct: 176 SRAYIRVREYES-RSVSRSPN 195
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 131/148 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R RE+ED+FYKYG IVDIDLK+PPRPPGY FLEFED RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVE+AHGGR ++DR ++ S G + GVSRRS+YRV+VTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRSAAESGGRAGGVSRRSEYRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGEL 148
ASWQDLKDHMRRAGDVCF+QVFRD G +
Sbjct: 121 ASWQDLKDHMRRAGDVCFAQVFRDAGTM 148
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/339 (47%), Positives = 191/339 (56%), Gaps = 104/339 (30%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SRS+R LYVGNLP D R R++ED+F+KYGP+V IDLK PPRPPGY F+EFE+ RDAED
Sbjct: 1 MGSRSNRILYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---RSDYRVLVTGL 117
AIRGRDGY+ DG+RLRVELAHGGR + S+DRYSS+SSGG R R DYRV ++GL
Sbjct: 61 AIRGRDGYDIDGHRLRVELAHGGR-GALSVDRYSSFSSGGGRRNGRLQSHCDYRVTISGL 119
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMF 177
PSSASWQDLKDHMRRA G+V + ++
Sbjct: 120 PSSASWQDLKDHMRRA------------------------GDVTFAQV------------ 143
Query: 178 SCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
FR+S G TG+VDYT+YDDMKYAIRKLD +EF+
Sbjct: 144 -----------------------FRDS-----NGTTGVVDYTNYDDMKYAIRKLDDTEFK 175
Query: 238 NAFSRSYVRVREYDSR----------------------------RSYSRSPSRSPYYSRS 269
N FSRSY+RV+EY S+ S +RSPSRSP SR
Sbjct: 176 NPFSRSYIRVKEYGSKGSMSRSRSRSFSRSRSRSRSRSRSRSHSHSRTRSPSRSPNVSRR 235
Query: 270 RSRS-PYYSRSRSPSRSWSYSP-------RSRSYSPRGK 300
+ S P SRSRS S S RSRS +PR K
Sbjct: 236 KVHSKPLRSRSRSGSMQRPRSKPVPRTKSRSRSRTPRHK 274
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 166/253 (65%), Gaps = 67/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 120 ASWQDLKDHMRRA------------------------GDVCFTDVYREAGATIG------ 149
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
I DYT+Y+DMK+AIRKLD SEFRNA
Sbjct: 150 -----------------------------------IADYTNYEDMKHAIRKLDDSEFRNA 174
Query: 240 FSRSYVRVREYDS 252
FSR+YVRVREYD+
Sbjct: 175 FSRTYVRVREYDA 187
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 165/300 (55%), Positives = 190/300 (63%), Gaps = 74/300 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGG R SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG-RGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRAGDVCF+ V+ REAG +G
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVY-----------------------REAGATIG------- 149
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
++ + ++ + H I RKLD SEFRNAF
Sbjct: 150 --------------IADYTNYEDMKHAI--------------------RKLDDSEFRNAF 175
Query: 241 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY------SRSRSPSRSWSYSPRSRS 294
SR+Y+RVREYD+RR SRS S+SP +RS SRSP S SRSP+RS S PRS S
Sbjct: 176 SRTYIRVREYDARR--SRSQSKSPVKARSPSRSPPVSPPRDKSISRSPARSKSL-PRSCS 232
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 182/338 (53%), Gaps = 79/338 (23%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI+GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIQGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S++RVLVTGLPSSASWQDLKDHMR+ GG+V + ++
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYR 156
Query: 168 AGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYA 227
GR G TG+VDYT Y+DMKYA
Sbjct: 157 DGR----------------------------------------GTTGVVDYTCYEDMKYA 176
Query: 228 IRKLDRSEFRNAFSRSYVRVREYDSRRS--YSRSPSRSPYYSRSRSRSPYYSRSRSPSRS 285
++KLD +EFRNAFS YVRVREYDSR+
Sbjct: 177 VKKLDDTEFRNAFSHGYVRVREYDSRKDSRSPSRGRSYSRSRSRSRSRGRSLSRSRSRSR 236
Query: 286 WSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 323
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 237 SRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 274
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 161/273 (58%), Gaps = 78/273 (28%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S++RVLVTGLPSSASWQDLKDHMR+ GG+V + ++
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRK------------------------GGDVCFSQVYR 156
Query: 168 AGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYA 227
R G TG+VDYT Y+DMKYA
Sbjct: 157 DAR----------------------------------------GTTGVVDYTCYEDMKYA 176
Query: 228 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 260
++KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 177 LKKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 208
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/251 (55%), Positives = 159/251 (63%), Gaps = 67/251 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+GRDGYNFDG RLRVELAHGGR +SSS+ S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN-SHGGGGRRGGVSRHTEYRVLVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMR+A G+V + E+ RE G
Sbjct: 120 ASWQDLKDHMRKA------------------------GDVCFSEVYREGG---------- 145
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G GIVDYT+YDDMKYAIRKLD +EF+NA
Sbjct: 146 -------------------------------GTIGIVDYTNYDDMKYAIRKLDDTEFKNA 174
Query: 240 FSRSYVRVREY 250
FSR+ +RV+EY
Sbjct: 175 FSRAPIRVKEY 185
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 161/261 (61%), Gaps = 65/261 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R +EVEDLFYKYG I IDLK+PPRPPGYAF+EFED DA+D
Sbjct: 1 MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS DRYSS+ R DYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS W ++++ R G FS
Sbjct: 121 SAS---------------------------------------WQDLKDHMRRAGDVCFSQ 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
++R +G TGIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 142 VFR-------------------------DGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNA 176
Query: 240 FSRSYVRVREYDSRRSYSRSP 260
FSR+YVRVREYDS+R SRSP
Sbjct: 177 FSRAYVRVREYDSKRDLSRSP 197
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/251 (55%), Positives = 158/251 (62%), Gaps = 67/251 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG RLRVELAHGGR +SSS+ S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRANSSSLPN-SYGGGGRRGGVSRHTEYRVLVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMR+A G+V + E+ RE G
Sbjct: 120 ASWQDLKDHMRKA------------------------GDVCFSEVYREGG---------- 145
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
G GIVDYT+YDDMKYAIRKLD +EF+NA
Sbjct: 146 -------------------------------GTIGIVDYTNYDDMKYAIRKLDDTEFKNA 174
Query: 240 FSRSYVRVREY 250
FSR+ +RV+EY
Sbjct: 175 FSRAPIRVKEY 185
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/258 (54%), Positives = 160/258 (62%), Gaps = 69/258 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---RSDYRVLVTGL 117
AI GRDGYNFDG+RLRVE AHGGR ++SS DR S + GG S+YRVLVTGL
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGM 176
PSSASWQDLKDHMR+A G+V + E+ RE G
Sbjct: 121 PSSASWQDLKDHMRKA------------------------GDVCFSEVYREGG------- 149
Query: 177 FSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEF 236
G GIVDYT+YDDMKYAI+KLD +EF
Sbjct: 150 ----------------------------------GTVGIVDYTNYDDMKYAIKKLDDTEF 175
Query: 237 RNAFSRSYVRVREYDSRR 254
RNAF R+Y+RV+EYD +R
Sbjct: 176 RNAFGRAYIRVKEYDGKR 193
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/143 (82%), Positives = 130/143 (90%), Gaps = 4/143 (2%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRSSRT+YVGNLPGD R RE++DLF+KYGPIVDIDLK+PPRPPGY F+EFED RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSA 121
RGRDGYNFDGYRLRVE+AHGGR SS DRYSSY GGS VSRRS+YRV++TGLPSSA
Sbjct: 62 RGRDGYNFDGYRLRVEIAHGGRGPPSS-DRYSSYGGRGGS--VSRRSEYRVIITGLPSSA 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMRRAGDVCF+QVFR+
Sbjct: 119 SWQDLKDHMRRAGDVCFAQVFRE 141
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/252 (56%), Positives = 160/252 (63%), Gaps = 65/252 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
A GRDGYNFDG+RLRVE AHGGR + SS DR S++ GG RGVSR S+YRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDH +R+AG + FS
Sbjct: 121 SASWQDLKDH-----------------------------------MRKAGDVC----FSE 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
+YR G GIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 142 VYREG-------------------------GGTVGIVDYTNYDDMKYAIKKLDDSEFRNA 176
Query: 240 FSRSYVRVREYD 251
FS+ ++RV+EYD
Sbjct: 177 FSKGHIRVKEYD 188
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 158/257 (61%), Gaps = 67/257 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---RSDYRVLVTGL 117
AI GRDGYNFDG+RLRVE AHGGR ++SS DR S + GG S+YRVLVTGL
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMF 177
PSSASWQDLKDHM R+AG + F
Sbjct: 121 PSSASWQDLKDHM-----------------------------------RKAGDVC----F 141
Query: 178 SCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
S +YR G GIVDYT+YDDMKYAI+KLD +EFR
Sbjct: 142 SEVYRE-------------------------GGGTVGIVDYTNYDDMKYAIKKLDDTEFR 176
Query: 238 NAFSRSYVRVREYDSRR 254
NAF R+Y+RV+EYD +R
Sbjct: 177 NAFGRAYIRVKEYDGKR 193
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/252 (55%), Positives = 163/252 (64%), Gaps = 65/252 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGG R +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG-RGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRAGDVCF+ V+ REAG +G
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVY-----------------------REAGATIG------- 149
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
++ + ++ + H I RKLD SEFRNAF
Sbjct: 150 --------------IADYTNYEDMKHAI--------------------RKLDDSEFRNAF 175
Query: 241 SRSYVRVREYDS 252
SR+YVRVREYD+
Sbjct: 176 SRTYVRVREYDA 187
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/253 (56%), Positives = 165/253 (65%), Gaps = 68/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDA-DAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 60 AIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 119 ASWQDLKDHMRRA------------------------GDVCFTDVYREAGATIG------ 148
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
I DYT+Y+DMK+AIRKLD SEFRNA
Sbjct: 149 -----------------------------------IADYTNYEDMKHAIRKLDDSEFRNA 173
Query: 240 FSRSYVRVREYDS 252
FSR+YVRVREYD+
Sbjct: 174 FSRTYVRVREYDA 186
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/252 (55%), Positives = 163/252 (64%), Gaps = 65/252 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGG R +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG-RGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRAGDVCF+ V+ REAG +G
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVY-----------------------REAGATIG------- 149
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
++ + ++ + H I RKLD SEFRNAF
Sbjct: 150 --------------IADYTNYEDMKHAI--------------------RKLDDSEFRNAF 175
Query: 241 SRSYVRVREYDS 252
SR+YVRVREYD+
Sbjct: 176 SRTYVRVREYDA 187
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 163/253 (64%), Gaps = 67/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRR G+V + ++ REAG +G
Sbjct: 120 ASWQDLKDHMRR------------------------AGDVCFTDVYREAGATIG------ 149
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
I DYT+Y+DMK+AIRKLD SEFRNA
Sbjct: 150 -----------------------------------IADYTNYEDMKHAIRKLDDSEFRNA 174
Query: 240 FSRSYVRVREYDS 252
FSR+Y+RVREYD+
Sbjct: 175 FSRTYIRVREYDA 187
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/254 (55%), Positives = 161/254 (63%), Gaps = 65/254 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
A GRDGYNFDG+RLRVE AHGGR + SS DR S++ GG RGVSR S+YRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASWQDLKDH +R+AG + FS
Sbjct: 121 SASWQDLKDH-----------------------------------MRKAGDVC----FSE 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
+YR G GIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 142 VYREG-------------------------GGTVGIVDYTNYDDMKYAIKKLDDSEFRNA 176
Query: 240 FSRSYVRVREYDSR 253
FS+ ++RV+EYD +
Sbjct: 177 FSKGHIRVKEYDGK 190
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/261 (55%), Positives = 166/261 (63%), Gaps = 75/261 (28%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYK--------YGPIVDIDLKIPPRPPGYAFLEF 52
M+ R+ T+YVGNLPGD R REV+DLFYK YG IV+IDLKIPPRPPG+AF+EF
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEF 60
Query: 53 EDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
ED RDAEDAI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV
Sbjct: 61 EDARDAEDAIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRI 171
+VTGLPSSASWQDLKDHMRRA G+V + ++ REAG
Sbjct: 120 MVTGLPSSASWQDLKDHMRRA------------------------GDVCFTDVYREAGAT 155
Query: 172 LGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKL 231
+G I DYT+Y+DMK+AIRKL
Sbjct: 156 IG-----------------------------------------IADYTNYEDMKHAIRKL 174
Query: 232 DRSEFRNAFSRSYVRVREYDS 252
D SEFRNAFSR+YVRVREYD+
Sbjct: 175 DDSEFRNAFSRTYVRVREYDA 195
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/256 (53%), Positives = 158/256 (61%), Gaps = 66/256 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS DR S + GG S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFS 178
SSASWQDLKDHM R+AG + FS
Sbjct: 121 SSASWQDLKDHM-----------------------------------RKAGDVC----FS 141
Query: 179 CLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
+YR G GIVDYT+YDDMKYAI+KLD +EFRN
Sbjct: 142 EVYRE-------------------------GGGTVGIVDYTNYDDMKYAIKKLDDTEFRN 176
Query: 239 AFSRSYVRVREYDSRR 254
AF R+Y+RV+EY+ +R
Sbjct: 177 AFGRAYIRVKEYNGKR 192
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/142 (82%), Positives = 129/142 (90%), Gaps = 4/142 (2%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
RSSRT+YVGNLPGD R RE++DLF+KYGPIVDIDLK+PPRPPGY F+EFED RDAEDAIR
Sbjct: 1 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 60
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSAS 122
GRDGYNFDGYRLRVE+AHGGR SS DRYSSY GGS VSRRS+YRV++TGLPSSAS
Sbjct: 61 GRDGYNFDGYRLRVEIAHGGRGPPSS-DRYSSYGGRGGS--VSRRSEYRVIITGLPSSAS 117
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQDLKDHMRRAGDVCF+QVFR+
Sbjct: 118 WQDLKDHMRRAGDVCFAQVFRE 139
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 144/271 (53%), Positives = 169/271 (62%), Gaps = 64/271 (23%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R +EVEDLFYKYGP+ IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGY+FDG+RLRVELAHGGR HSSS S G G SRRS+YRV+VTGLPSS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGASRRSEYRVVVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
AS W ++++ R G FS +
Sbjct: 121 AS---------------------------------------WQDLKDHMRRAGDVCFSQV 141
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+R +G TGIVDYT+Y+DMKYAI+K+D SEFRNAF
Sbjct: 142 FR-------------------------DGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAF 176
Query: 241 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRS 271
S++YVRVREYDS+R SRSP R +SR R+
Sbjct: 177 SQAYVRVREYDSKRDSSRSPGRDRSHSRGRN 207
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/256 (53%), Positives = 158/256 (61%), Gaps = 66/256 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS DR S + GG S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFS 178
SSASWQDLKDHM R+AG + FS
Sbjct: 121 SSASWQDLKDHM-----------------------------------RKAGDVC----FS 141
Query: 179 CLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
+YR G GIVDYT+YDDMKYAI+KLD +EFRN
Sbjct: 142 EVYRE-------------------------GGGTVGIVDYTNYDDMKYAIKKLDDTEFRN 176
Query: 239 AFSRSYVRVREYDSRR 254
AF R+Y+RV+EY+ +R
Sbjct: 177 AFGRAYIRVKEYNGKR 192
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/269 (51%), Positives = 159/269 (59%), Gaps = 74/269 (27%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRI 171
VLVT L SSASWQDLKDH+ + GG+V
Sbjct: 121 VLVTWLASSASWQDLKDHIAK------------------------GGDV----------- 145
Query: 172 LGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKL 231
FS +YR G TG+VDYT Y+DMKYA++KL
Sbjct: 146 ----CFSQVYR-------------------------DARGTTGVVDYTCYEDMKYALKKL 176
Query: 232 DRSEFRNAFSRSYVRVREYDSRRSYSRSP 260
D +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 140/190 (73%), Gaps = 17/190 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R RE+EDLFYKYG IVDIDLK+PPRPPGY F+EFED RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY-------------SSGGSRGVSRR 107
AIRGRDGYNFDG RLRVE+AHGGR ++DRYS Y G + GVSRR
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRYSIYSSGGRGGGGSAADCGGRAGGVSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S+YRV VTGLPSSASWQDLKDHMRRAGDVCF+QVFRD ++ F N+ +++
Sbjct: 121 SEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDF----TNYDDMKY 176
Query: 168 AGRILGGGMF 177
A R L F
Sbjct: 177 AIRKLDDSEF 186
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/246 (58%), Positives = 158/246 (64%), Gaps = 66/246 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRILGGGMFSC 179
ASWQDLKDHMRRA G+V + ++ REAG +G
Sbjct: 121 ASWQDLKDHMRRA------------------------GDVCFSDVYREAGETIG------ 150
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
IVDYT+YDDMKYAIRKLD S+FRNA
Sbjct: 151 -----------------------------------IVDYTNYDDMKYAIRKLDDSQFRNA 175
Query: 240 FSRSYV 245
FSR +
Sbjct: 176 FSRCSI 181
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 142/192 (73%), Gaps = 19/192 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R RE+EDLFYKYG IVDIDLK+PPRPPGY F+EFED RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRR-HSSSMDRYSSY--------------SSGGSRGVS 105
AIRGRDGYNFDG RLRVE+AHGGR +S+DRYS Y + G + GVS
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPASVDRYSIYSSGGGRGGGGSASENGGRAGGVS 120
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI 165
RRS+YRV VTGLPSSASWQDLKDHMRRAGDVCF+QVFRD ++ F N+ ++
Sbjct: 121 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDF----TNYDDM 176
Query: 166 REAGRILGGGMF 177
+ A R L F
Sbjct: 177 KYAIRKLDDSEF 188
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/252 (55%), Positives = 161/252 (63%), Gaps = 65/252 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGG R SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG-RGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDHMRRAGDVCF+ V+ REAG +G
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVY-----------------------REAGATIG------- 149
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
++ + ++ + H I RKLD SEFRNAF
Sbjct: 150 --------------IADYTNYEDMKHAI--------------------RKLDDSEFRNAF 175
Query: 241 SRSYVRVREYDS 252
SR+Y+RVREYD+
Sbjct: 176 SRTYIRVREYDA 187
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD-RYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS+D S GG G SRRS+YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRG 146
SASWQDLKDHMRRAGDVCFSQVF D G
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGG 147
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/340 (50%), Positives = 204/340 (60%), Gaps = 76/340 (22%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSS +SRTLYVGNLPGD R REV+DLFYKYG IV +DL+ PPR PGYAF++FED +AE+
Sbjct: 1 MSSCASRTLYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD---------RYSSYSSGGSR--GVSRRSD 109
AIRGRDGYNF+G RLRVELA+GGR+HS+ R+ + SG S G S+ SD
Sbjct: 61 AIRGRDGYNFNGCRLRVELAYGGRKHSTPGHGGRKHSFPGRHYNTCSGISENHGPSKHSD 120
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAG 169
+RVLVTGLPSSAS W ++++
Sbjct: 121 HRVLVTGLPSSAS---------------------------------------WQDLKDHM 141
Query: 170 RILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIR 229
R G FS ++ R G TGIVDY +YDDMK+AI+
Sbjct: 142 RQAGDVCFSRVFPGR-------------------------GGKTGIVDYKNYDDMKHAIK 176
Query: 230 KLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSR-SPYYSRSRSRSPYYSRSRSPSRSWSY 288
KLD SEFRNAFSRSYVRVR+ DSRRSYS+SPS + S+SRSRS S+SRS SRS +
Sbjct: 177 KLDDSEFRNAFSRSYVRVRKDDSRRSYSQSPSHGTRDRSKSRSRSRSGSQSRSRSRSRNC 236
Query: 289 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFS 328
S RSRS SP KYS RS S+SP RS S S +G PRS S
Sbjct: 237 SERSRSKSPGAKYSHRSLSVSPGRSVSPHSHAGLSPRSSS 276
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 158/256 (61%), Gaps = 66/256 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS DR S + GG S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFS 178
SSASWQDLKDH +R+AG + FS
Sbjct: 121 SSASWQDLKDH-----------------------------------MRKAGDVC----FS 141
Query: 179 CLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
+YR G GIVDYT+YDDMKYAI+KLD +EFRN
Sbjct: 142 EVYREG-------------------------GGTVGIVDYTNYDDMKYAIKKLDDTEFRN 176
Query: 239 AFSRSYVRVREYDSRR 254
AF R+Y+RV+EY+ +R
Sbjct: 177 AFGRAYIRVKEYNGKR 192
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD-RYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS+D S GG G SRRS+YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRG 146
SASWQDLKDHMRRAGDVCFSQVF D G
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGG 147
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/256 (53%), Positives = 152/256 (59%), Gaps = 74/256 (28%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+RLRVELAHGGRR S S G R SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHRLRVELAHGGRRSSHDARGSYSGGGRGGRDGGDGGVRGRGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGR 170
RV+V+GLPSSASWQDLKDHMR+ GGEV + ++ GR
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRK------------------------GGEVCFSQVFRDGR 156
Query: 171 ILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRK 230
G TGIVDYTSY+DMKYAI+K
Sbjct: 157 ----------------------------------------GTTGIVDYTSYEDMKYAIKK 176
Query: 231 LDRSEFRNAFSRSYVR 246
LD +EFRNAFS YVR
Sbjct: 177 LDDTEFRNAFSHGYVR 192
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD-RYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS+D S GG G SRRS+YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRG 146
SASWQDLKDHMRRAGDVCFSQVF D G
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGG 147
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/147 (82%), Positives = 130/147 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGE 147
ASWQDLKDHMRRAGDVCFS V+R+ GE
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGE 147
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 162/261 (62%), Gaps = 66/261 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD R EVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDYRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
AS W ++++ R G FS +
Sbjct: 120 AS---------------------------------------WQDLKDHMRKAGDVCFSEV 140
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+ R GM+G+VDY++YDDMKYAIRKLD +EFRNAF
Sbjct: 141 FPDR-------------------------KGMSGVVDYSNYDDMKYAIRKLDATEFRNAF 175
Query: 241 SRSYVRVREYDSRRSYSRSPS 261
S +Y+RVREY+S RS SRSP
Sbjct: 176 SSAYIRVREYES-RSVSRSPD 195
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 162/261 (62%), Gaps = 66/261 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD R EVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDYRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
AS W ++++ R G FS +
Sbjct: 120 AS---------------------------------------WQDLKDHMRKAGDVCFSEV 140
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+ R GM+G+VDY++YDDMKYAIRKLD +EFRNAF
Sbjct: 141 FPDR-------------------------KGMSGVVDYSNYDDMKYAIRKLDATEFRNAF 175
Query: 241 SRSYVRVREYDSRRSYSRSPS 261
S +Y+RVREY+S RS SRSP
Sbjct: 176 SSAYIRVREYES-RSVSRSPD 195
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/261 (53%), Positives = 154/261 (59%), Gaps = 77/261 (29%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+ LRVELAHGGRR S S G RG SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGR 170
RV+V+GLPSSASWQDLKDHMR+ GGEV + ++ GR
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRK------------------------GGEVCFSQVFRDGR 156
Query: 171 ILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRK 230
G TGIVDYTSY+DMKYA
Sbjct: 157 ----------------------------------------GTTGIVDYTSYEDMKYA--- 173
Query: 231 LDRSEFRNAFSRSYVRVREYD 251
LD +EFRNAFS YVRVREYD
Sbjct: 174 LDDTEFRNAFSHEYVRVREYD 194
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 162/261 (62%), Gaps = 66/261 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD R EVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDYRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
AS W ++++ R G FS +
Sbjct: 120 AS---------------------------------------WQDLKDHMRKAGDVCFSEV 140
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
+ R GM+G+VDY++YDDMKYAIRKLD +EFRNAF
Sbjct: 141 FPDR-------------------------KGMSGVVDYSNYDDMKYAIRKLDATEFRNAF 175
Query: 241 SRSYVRVREYDSRRSYSRSPS 261
S +Y+RVREY+S RS SRSP
Sbjct: 176 SSAYIRVREYES-RSVSRSPD 195
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 135/177 (76%), Gaps = 7/177 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+ RT+YVGNLP D R RE+EDLF KYGPIVDIDLKIPPRPP YAF+EFED RDA+D
Sbjct: 1 MSRRNGRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG +LRVELAHGG+ S DR +SY+S G RG RRSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYDFDGCKLRVELAHGGK--GPSFDRPNSYTSSGRRGALRRSDYRVIVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMF 177
ASWQDLKDHMRRAGDVCFS V+ G + ++ F N+ +++ A R L F
Sbjct: 119 ASWQDLKDHMRRAGDVCFSDVYPGAGAITG-IVEFP----NYEDMKHAIRKLDDSEF 170
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/285 (51%), Positives = 169/285 (59%), Gaps = 67/285 (23%)
Query: 29 KYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 88
KYG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +SS
Sbjct: 2 KYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNSS 61
Query: 89 SMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGE 147
S DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+A
Sbjct: 62 SRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKA-------------- 107
Query: 148 LHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHN 207
G+V + ++ GR
Sbjct: 108 ----------GDVCFSQVFHDGR------------------------------------- 120
Query: 208 IFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 267
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +S
Sbjct: 121 ---GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHS 176
Query: 268 RSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 312
R RS S SRS SP+GK S+RSP+ SPA+
Sbjct: 177 RGRSYS-RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 220
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/146 (79%), Positives = 128/146 (87%), Gaps = 2/146 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRG 146
ASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 119 ASWQDLKDHMRRAGDVCFSDVYREGG 144
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/145 (81%), Positives = 130/145 (89%), Gaps = 1/145 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR HSSS DRY+S+S+ G RGVSRRS+YRVLV+GLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRYNSHSNGRGGRGVSRRSEYRVLVSGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRD 144
SASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHD 145
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+GRDGYNFDG RLRVELAHGGR +SSS+ S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN-SHGGGGRRGGVSRHTEYRVLVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
ASWQDLKDHMR+AGDVCFS+V+R+
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVYRE 143
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 156/274 (56%), Gaps = 77/274 (28%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIRE 167
S++RVLVTGLPSSASW Q +D H R GG+V + ++
Sbjct: 121 SEFRVLVTGLPSSASW----------------QDLKD----HMRK----GGDVCFSQVYR 156
Query: 168 AGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYA 227
R G TG+VDYT Y+DMKYA
Sbjct: 157 DAR----------------------------------------GTTGVVDYTCYEDMKYA 176
Query: 228 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 261
++KLD +EFRNAFS YVRVREYDSR+ R+ +
Sbjct: 177 LKKLDDTEFRNAFSNGYVRVREYDSRKDSRRAEA 210
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 153/253 (60%), Gaps = 67/253 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR---YSSYSSGGSRGVSRRSDYRVLVTGL 117
AI GRDGYNFDG RLRVELAHGGR +SSS+ G GVSR ++YRVLVTGL
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRANSSSLPNSYGGGGGGGGRRGGVSRHTEYRVLVTGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMF 177
PSSASW Q +D +R+AG + F
Sbjct: 121 PSSASW----------------QDLKD-------------------HMRKAGDVC----F 141
Query: 178 SCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
S +YR G TGIVDYT+YDDMKYAIRKLD SEFR
Sbjct: 142 SEVYRE-------------------------GDGTTGIVDYTNYDDMKYAIRKLDDSEFR 176
Query: 238 NAFSRSYVRVREY 250
NAFSR+ +RV+EY
Sbjct: 177 NAFSRAPIRVKEY 189
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 121/144 (84%), Positives = 128/144 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGY+FDG++LRVELAHGGR HSSS S G RGVSRRS+YRVLVTGLPSS
Sbjct: 61 AIRGRDGYDFDGHQLRVELAHGGRGHSSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
ASWQDLKDHMRRAGDVCFSQVFRD
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 157/252 (62%), Gaps = 65/252 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
A GRDGYNFDG+RLRVE AHGGR + SS DR S++ GG RGVSR S+YRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SASW Q +D +R+AG + FS
Sbjct: 121 SASW----------------QDLKDH-------------------MRKAGDVC----FSE 141
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
+YR G GIVDYT+YDDMKYAI+KLD SEFRNA
Sbjct: 142 VYREG-------------------------GGTVGIVDYTNYDDMKYAIKKLDDSEFRNA 176
Query: 240 FSRSYVRVREYD 251
FS+ ++RV+EYD
Sbjct: 177 FSKGHIRVKEYD 188
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/146 (81%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRH--SSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AIRGRDGY+FDG+RLRVELAHGGR H S YS G GVSRRS+YRV+VTGLP
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGSGGRGRGGVSRRSEYRVVVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
SSASWQDLKDHMRRAGDVCFSQVFRD
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRD 146
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/259 (52%), Positives = 155/259 (59%), Gaps = 71/259 (27%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS-SMDRYSSYSSGGSRG------VSRRSDYRVL 113
A GRDGYNFDG RLRVE AHGGR S DR SS+ GG G VSR +DYRVL
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSSSFGGGGGGGGGGRRGVSRHTDYRVL 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILG 173
VTGLPSSASW Q +D +R AG +
Sbjct: 121 VTGLPSSASW----------------QDLKD-------------------HMRRAGDVC- 144
Query: 174 GGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDR 233
FS +YR +G TGIVDYT+YDDMKYAI+KLD
Sbjct: 145 ---FSEVYREG-------------------------SGTTGIVDYTNYDDMKYAIKKLDD 176
Query: 234 SEFRNAFSRSYVRVREYDS 252
+EF+NAFS+ Y+RV+EYD+
Sbjct: 177 TEFKNAFSKGYIRVKEYDA 195
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 123/140 (87%), Gaps = 2/140 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQ 140
ASWQDLKDHMRRAGDVCFS
Sbjct: 119 ASWQDLKDHMRRAGDVCFSD 138
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/259 (52%), Positives = 157/259 (60%), Gaps = 76/259 (29%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRSSRT+YVGNLPGD R E++DLFYKYG I+DIDLK+PPRPPGYAF+EF+D RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAH-GGRRHSS-SMDRYSS----------YSSGGSRGVSRRSDY 110
+ RDGY FDG+RLRVE AH GGR H S DR+S+ GG RGVSRRS+Y
Sbjct: 62 KARDGYVFDGHRLRVEFAHSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEY 121
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGR 170
RV+VTGLPSSASWQDLKDHMR A G+V + ++
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTA------------------------GDVCFAQV----- 152
Query: 171 ILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRK 230
FRES G GIVD+T+YDDMK AIRK
Sbjct: 153 ------------------------------FRES-----NGTRGIVDFTNYDDMKNAIRK 177
Query: 231 LDRSEFRNAFSRSYVRVRE 249
LD +EFRN FS SY+RVRE
Sbjct: 178 LDDTEFRNPFSHSYIRVRE 196
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/259 (52%), Positives = 157/259 (60%), Gaps = 76/259 (29%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRSSRT+YVGNLPGD R E++DLFYKYG I+DIDLK+PPRPPGYAF+EF+D RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAH-GGRRHSS-SMDRYSS----------YSSGGSRGVSRRSDY 110
+ RDGY FDG+RLRVE AH GGR H S DR+S+ GG RGVSRRS+Y
Sbjct: 62 KARDGYVFDGHRLRVEFAHSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEY 121
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGR 170
RV+VTGLPSSASWQDLKDHMR A G+V + ++
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTA------------------------GDVCFAQV----- 152
Query: 171 ILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRK 230
FRES G GIVD+T+YDDMK AIRK
Sbjct: 153 ------------------------------FRES-----NGTRGIVDFTNYDDMKNAIRK 177
Query: 231 LDRSEFRNAFSRSYVRVRE 249
LD +EFRN FS SY+RVRE
Sbjct: 178 LDDTEFRNPFSHSYIRVRE 196
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 128/149 (85%), Gaps = 1/149 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R+REVED+FYK+GPIVDIDLKIPPRPPGYAF++FED RDAED
Sbjct: 1 MSSRSSRTIYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDG+RLRVELAHGGR SS S SRG SRRSDYRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGFRLRVELAHGGRGSSSSVDRYSSYSGGSSSRGASRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGEL 148
SASWQDLKDHMR+AGDVCFSQVFR+RG +
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFRERGGM 149
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/148 (76%), Positives = 125/148 (84%), Gaps = 2/148 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS D G RGVSR S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRG 146
SSASWQDLKDHMR+AGDVCFS+V+R+ G
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGG 148
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/154 (72%), Positives = 122/154 (79%), Gaps = 10/154 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+ LRVELAHGGRR S S G RG SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRD 154
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/154 (72%), Positives = 122/154 (79%), Gaps = 10/154 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+ LRVELAHGGRR S S G RG SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRD 154
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 117/137 (85%), Gaps = 2/137 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 184
Query: 121 ASWQDLKDHMRRAGDVC 137
ASWQDLKDHMR AGDV
Sbjct: 185 ASWQDLKDHMRNAGDVV 201
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 224 MKYAIRKLDRSEFRNAFSRSYVRVREYDSR 253
++ IRKLD SEF+NAFS++Y+RV+EYD +
Sbjct: 207 VRVVIRKLDDSEFKNAFSKAYIRVKEYDGK 236
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/270 (51%), Positives = 151/270 (55%), Gaps = 91/270 (33%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYK FED RDA+D
Sbjct: 72 MSRRNSRTIYVGNLPGDIREREVEDLFYK----------------------FEDPRDADD 109
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YRV+VTGLPSS
Sbjct: 110 AICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 169
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKDH +R AG + FS +
Sbjct: 170 ASWQDLKDH-----------------------------------MRRAGDVC----FSDV 190
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMT-GIVDYTSYDDMKYAIRKLDRSEFRNA 239
YR AG T GIVDYT+Y+DMKYAIRKLD SEFRNA
Sbjct: 191 YRE--------------------------AGATVGIVDYTTYEDMKYAIRKLDDSEFRNA 224
Query: 240 FSRSYVRVREYDSRRSYSRSPSRSPYYSRS 269
FSR+Y+RVRE SR SR+P SP RS
Sbjct: 225 FSRAYIRVRESISR---SRTPVSSPSRGRS 251
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 118/157 (75%), Gaps = 13/157 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+EDLFYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------GVSRR 107
AI+GRDGYNFDG RLRVELAHGGR SSS R GG GVSR
Sbjct: 61 AIKGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGGGGGGYGGGGGGGGSARFGVSRH 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD 157
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFAGMT-------GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA +T G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 142 HMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 200
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 148/260 (56%), Gaps = 74/260 (28%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R R VEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR--------RHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
A GRDGYNFDG RLRVE AHGGR R S + G RGVSR +DYRV
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSGSFGGGGGAGGGSGRRGVSRHTDYRV 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGRI 171
LVTGLPSSASWQ +L M R G+V + E+ RE G
Sbjct: 121 LVTGLPSSASWQ----------------------DLKDHMRR--AGDVCFSEVYREGG-- 154
Query: 172 LGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKL 231
G GI DYT+YDDMKYAI+KL
Sbjct: 155 ---------------------------------------GTIGIADYTNYDDMKYAIKKL 175
Query: 232 DRSEFRNAFSRSYVRVREYD 251
D +EF+NAFS+ Y+RV+EYD
Sbjct: 176 DDTEFKNAFSKGYIRVKEYD 195
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 117/151 (77%), Gaps = 7/151 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R EVEDLFYKYG I+DI+LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-------MDRYSSYSSGGSRGVSRRSDYRVL 113
AIRGRDGYNFDG RLRVELAHGGR SSS SGG +SR S++RV+
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 151
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 29/102 (28%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD- 251
H R++ FA G GIVDYT+Y+DMKYAIRKLD +EFRN ++R+Y+RV+ Y+
Sbjct: 136 HMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFRNPWARAYIRVKMYEN 195
Query: 252 -------------------SRRSYSRSPSRSPYYSRSRSRSP 274
+S RSPSRS S+SRS SP
Sbjct: 196 SPSRSRSRSRSRSRSPRRNRSKSLERSPSRS--VSKSRSASP 235
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 116/156 (74%), Gaps = 12/156 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD 156
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
Query: 200 HFRESYHNIFAGMT-------GIVDYTSYDDMKYAIRKL 231
H R++ FA +T G+VDYT+YDDMKYA+R L
Sbjct: 141 HMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAVRNL 179
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/146 (72%), Positives = 118/146 (80%), Gaps = 2/146 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AIRGRDGYNFDG RLRVELAHGGR SSS D GG GVSR S+YRV+V GLP
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYRVIVRGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
SSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 SSASWQDLKDHMRKAGDVCFAEVSRD 146
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD- 251
H R++ FA G G+VDYT+++DMKYAIRKLD +EFRN ++R+Y+RV+ YD
Sbjct: 131 HMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKRYDV 190
Query: 252 --SRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 284
RS S SPSRS R+RS+S S SRS S+
Sbjct: 191 SPRSRSRSHSPSRSRSLKRNRSKSLERSVSRSASK 225
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 116/156 (74%), Gaps = 12/156 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD 156
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFAGMT-------GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA +T G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 141 HMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 116/156 (74%), Gaps = 12/156 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD 156
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFAGMT-------GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA +T G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 141 HMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 116/156 (74%), Gaps = 12/156 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD 156
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFAGMT-------GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA +T G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 141 HMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/147 (70%), Positives = 118/147 (80%), Gaps = 3/147 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS---MDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
AIRGRDGYNFDG RLRVELAHGGR SS+ SGG G+SR S++RV+V GL
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGGYGGGGGSGGRFGISRHSEFRVIVRGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
PSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFAEVSRD 147
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G G+VDYT+++DMKYAIRKLD +EFRN ++R+Y+RV++++
Sbjct: 132 HMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKQHE 190
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 119/157 (75%), Gaps = 13/157 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D R E+EDLFYKYG I++I+LK+PPRPP Y F+EF++ RDAED
Sbjct: 108 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 167
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-------------MDRYSSYSSGGSRGVSRR 107
AIRGRDGYNFDG RLRVELAHGGR SSS + GG GVSR
Sbjct: 168 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 227
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 228 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 264
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G G+VDYT+YDDMKYAIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 249 HMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 307
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 138/243 (56%), Gaps = 65/243 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SRT+YVGNLPGD R REV+ LF KYG I IDLK+PPRPP YAF+ F+D +A+D
Sbjct: 54 MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADD 113
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGVSRRSDYRVLVTGLPS 119
AI DGY+FDG RLRVE AH G +SSS DRYS +S+G G RGVS S+YRVLV LPS
Sbjct: 114 AICECDGYDFDGCRLRVEAAHVGYCNSSSRDRYSIHSNGQGGRGVSSHSEYRVLVNRLPS 173
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
SAS QDLKDHMR+A G V + ++ GR+
Sbjct: 174 SASCQDLKDHMRKA------------------------GAVCFSQVVHDGRV-------- 201
Query: 180 LYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 239
TGIVDYT+ DDMKYAI+ LD SEF+NA
Sbjct: 202 --------------------------------TTGIVDYTNCDDMKYAIKNLDGSEFQNA 229
Query: 240 FSR 242
FSR
Sbjct: 230 FSR 232
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 119/157 (75%), Gaps = 13/157 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D R E+EDLFYKYG I++I+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------GVSRR 107
AIRGRDGYNFDG RLRVELAHGGR SSS R GG GVSR
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 157
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G G+VDYT+YDDMKYAIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 142 HMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 119/157 (75%), Gaps = 13/157 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D R E+EDLFYKYG I++I+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------GVSRR 107
AIRGRDGYNFDG RLRVELAHGGR SSS R GG GVSR
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 157
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G G+VDYT+YDDMKYAIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 142 HMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 118/158 (74%), Gaps = 14/158 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R +VEDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSR 106
AIRGRDGYNFDG RLRVELAHGGR SS+ R GG G+SR
Sbjct: 61 AIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGISR 120
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD 158
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G G+VDYT+++DMKYAIRKLD +EF+N ++R+Y+RV++Y+
Sbjct: 143 HMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRKLDDTEFKNPWARAYIRVKQYE 201
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/150 (68%), Positives = 119/150 (79%), Gaps = 6/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+DI+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS------MDRYSSYSSGGSRGVSRRSDYRVLV 114
AIRGRDGYNFDG RLRVELAHGGR SSS + + GG G+SR S++RV+V
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRD 150
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G GIVDYT+YDDMKYAIRKLD +EFRN ++ +Y+RVR+Y+
Sbjct: 135 HMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLDDTEFRNPWAIAYIRVRKYE 193
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/150 (68%), Positives = 119/150 (79%), Gaps = 6/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+DI+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS------MDRYSSYSSGGSRGVSRRSDYRVLV 114
AIRGRDGYNFDG RLRVELAHGGR SSS + + GG G+SR S++RV+V
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRD 150
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RVR+Y+
Sbjct: 135 HMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRNPWARAYIRVRKYE 193
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 117/151 (77%), Gaps = 7/151 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLP D + EVEDLFYKYG I+DI+LKIPPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD-------RYSSYSSGGSRGVSRRSDYRVL 113
AIRGRDGYNFDG RLRVELAHGGR SSS D GG G+SR SDYRV+
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVI 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+ GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 IRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 151
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 7/58 (12%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 250
H R++ FA G G+VDYT+Y+DMKYAIRKLD +EFRN ++R+Y+RVREY
Sbjct: 136 HMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREY 193
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 120/156 (76%), Gaps = 12/156 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+DI+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR------------YSSYSSGGSRGVSRRS 108
AIRGRDGYNFDG RLRVELAHGGR SSS R S + GG G+SR S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 156
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 25/120 (20%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 252
H R++ FA G GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RVR+Y+S
Sbjct: 141 HMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYES 200
Query: 253 RRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 312
RS S S S S S R RS RS S + RS S+SP +
Sbjct: 201 SRSRSHSRSPSRSRSPKRVRSRSLERSVS------------------RSRSRSRSVSPIK 242
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 145/249 (58%), Gaps = 70/249 (28%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
RS+ T+YVGNLPGD R E+EDLFYKYG I+DIDLK+PPRPPGY F+EF++ RDAEDAIR
Sbjct: 3 RSNSTIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIR 62
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSRRSD-YRVLVTGLPSS 120
GRDGY FDG+RLRVE AHG +SS+D Y S S S G+ RRS YRV+V GLP+S
Sbjct: 63 GRDGYKFDGHRLRVERAHG---RASSVDVYYGSHSSGSRSSGLYRRSTGYRVIVHGLPTS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQ ++++ R G FS +
Sbjct: 120 ASWQ---------------------------------------DLKDHMRRAGDVCFSQV 140
Query: 181 YRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 240
YR +G G+VDYTSY+DMKYAIRKLD SEFRN F
Sbjct: 141 YR-------------------------KGSGTVGVVDYTSYEDMKYAIRKLDDSEFRNPF 175
Query: 241 SRSYVRVRE 249
SRSY+RVRE
Sbjct: 176 SRSYIRVRE 184
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 118/201 (58%), Gaps = 66/201 (32%)
Query: 52 FEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYR 111
FED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YR
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYR 60
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI-REAGR 170
V+VTGLPSSASWQDLKDHMRRA G+V + ++ REAG
Sbjct: 61 VMVTGLPSSASWQDLKDHMRRA------------------------GDVCFSDVYREAG- 95
Query: 171 ILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRK 230
GIVDYT+Y+DMKYAIRK
Sbjct: 96 ----------------------------------------ATVGIVDYTTYEDMKYAIRK 115
Query: 231 LDRSEFRNAFSRSYVRVREYD 251
LD SEFRNAFSR+Y+RVREYD
Sbjct: 116 LDDSEFRNAFSRAYIRVREYD 136
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 108/149 (72%), Gaps = 11/149 (7%)
Query: 7 RTLYVGNLPGDTRMREVEDLFY-KYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
R ++ L G + ++ LF+ KYGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GR
Sbjct: 4 RNCWILILFGRSFLKNCSSLFFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 63
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDYRVLVT 115
DGY+FDG+ LRVELAHGGRR S S G RG SRRS+YRV+V+
Sbjct: 64 DGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVS 123
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLPSSASWQDLKDHMR+ G+VCFSQVFRD
Sbjct: 124 GLPSSASWQDLKDHMRKGGEVCFSQVFRD 152
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 104/143 (72%), Gaps = 6/143 (4%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDA 61
SR++ +YVGNLP DT+ R++E+LF KYGPI IDLK R P +AF+EFED DA DA
Sbjct: 6 SRTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 65
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+RGRDGYNFDGY LRVEL G +R + GG+ G SRRSD+RV+VTGLP +
Sbjct: 66 VRGRDGYNFDGYALRVELPRTG-----VPERRFNRGGGGASGPSRRSDFRVIVTGLPPTG 120
Query: 122 SWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AGDV ++ VFRD
Sbjct: 121 SWQDLKDHMREAGDVGYADVFRD 143
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++F TG+V++ Y+DMKYAIR+LD S+FR + SY+RVRE R
Sbjct: 128 HMREAGDVGYADVFRDGTGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVRE--ERA 185
Query: 255 SYSRSPSRS 263
SRS SRS
Sbjct: 186 GGSRSRSRS 194
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/146 (63%), Positives = 105/146 (71%), Gaps = 8/146 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D + E+EDLFYKYG I+DI+LKIPPRPP Y F+EFE RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLP 118
AIR RDGYNFDG RLRVELAHGGR SSS DR SSY GG G DY ++ L
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGGRGPSSS-DRRSSYGGGGGGGGQGFLLLDYVDMMNLLE 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
+DHMR+AGDVCF++V RD
Sbjct: 120 XC-----FQDHMRKAGDVCFAEVSRD 140
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 10/77 (12%)
Query: 185 IFFIYFKCMRL---SYFKHFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRS 234
+ Y M L + H R++ FA G GIVDYT+YDDMKYAIRKLD +
Sbjct: 107 LLLDYVDMMNLLEXCFQDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDT 166
Query: 235 EFRNAFSRSYVRVREYD 251
EFRN ++R+Y+RV++YD
Sbjct: 167 EFRNPWARAYIRVKKYD 183
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 109/172 (63%), Gaps = 30/172 (17%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYK--------------------------YGPIV 34
MS +S T+Y+GNLP D R RE EDLFYK YG I+
Sbjct: 1 MSRWNSCTVYLGNLPNDIREREHEDLFYKDGVTPHHLDSTCGYHPIWVMQEDLHKYGRIL 60
Query: 35 DIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYS 94
DIDLK PPR P YAF+E DAEDAI G DGY+F ++VELAHGG S DR
Sbjct: 61 DIDLKXPPRRPVYAFVEVIYRCDAEDAIYGHDGYDF--XIIQVELAHGGT--GPSFDRLR 116
Query: 95 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
SYSS G R +R S+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 117 SYSSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAG 168
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 125/244 (51%), Gaps = 77/244 (31%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S+ +YVGNLP R REVEDLFYK+G I DIDLK+P RPP YAF++FED RDAEDAI R
Sbjct: 2 SKRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEAR 61
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
DGY ++G RLRVE R + ++++ S+G + V VT LPS SWQD
Sbjct: 62 DGYKYEGQRLRVE-----RANPKNIEKEKHVRGSRSKGSNT-----VKVTNLPSRVSWQD 111
Query: 126 LKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLYRFRI 185
LKD MR+A GEV + +I + G
Sbjct: 112 LKDFMRKA------------------------GEVTFAKIDKHG---------------- 131
Query: 186 FFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 245
GIVD+ +DDMKYAI++LD ++FRN F R+YV
Sbjct: 132 ---------------------------DGIVDFKHHDDMKYAIKRLDDTKFRNRFDRAYV 164
Query: 246 RVRE 249
RV++
Sbjct: 165 RVKQ 168
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/146 (63%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AIRGRDGYNFDG RLRVELAHGGR SSS D GG GVSR S+YR G
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYR----GAY 116
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
+ DHMR+AGDVCF++V RD
Sbjct: 117 EIGRYCWNLDHMRKAGDVCFAEVSRD 142
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 19/106 (17%)
Query: 198 FKHFRESYHNIFA-------GMTGIVDYTSYDDMKYA---------IRKLDRSEFRNAFS 241
H R++ FA G G+VDYT+++DMKYA IRKLD +EFRN ++
Sbjct: 125 LDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAQLTCSSLSQIRKLDDTEFRNPWA 184
Query: 242 RSYVRVREYD---SRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 284
R+Y+RV+ YD RS S SPSRS R+RS+S S SRS S+
Sbjct: 185 RAYIRVKRYDVSPRSRSRSHSPSRSRSLKRNRSKSLERSVSRSASK 230
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 99/134 (73%), Gaps = 4/134 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R REVED+FYKYG I DID+K P RPP +AF++FED RDAEDAIRGRDGY
Sbjct: 6 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGY 65
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG-SRGVSRRSDYRVLVTGLPSSASWQDLK 127
++DG RLRVE A+GGRR S+ R S+ S R + ++ V V+ LP SWQDLK
Sbjct: 66 DYDGARLRVEAANGGRRESA---RDSARGSARYPRNIRGNGEFTVEVSNLPPRVSWQDLK 122
Query: 128 DHMRRAGDVCFSQV 141
D MR+AGDV F++V
Sbjct: 123 DFMRKAGDVTFTEV 136
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 249
G+V+Y++ DMKYA+ KLD +EFR SYVRVR+
Sbjct: 142 GVVEYSNKRDMKYAVEKLDDTEFRGRSENSYVRVRQ 177
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 103/154 (66%), Gaps = 14/154 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R REVEDLF+KYG I +DLKI PRPP +AF+EFED RDA DA+RGRDG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------GVSRRSDYRVLVT 115
F G RLRVE++HG R G G SRR+DYRV+VT
Sbjct: 61 EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNPYGPSRRTDYRVIVT 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGEL 148
GLP S+SWQDLKDHMRRAG+V FSQV RD RG L
Sbjct: 121 GLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGML 154
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 97/135 (71%), Gaps = 9/135 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R REVED+FYKYG I DID+K P RPP +AF++FED RDAEDAIRGRDGY
Sbjct: 533 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGY 592
Query: 69 NFDGYRLRVELAHGGRRHSS--SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
++DG RLRVE A+GGRR S+ RY R + DY V ++ LP SWQDL
Sbjct: 593 DYDGARLRVEPANGGRRESAPRGSGRY-------PRNIRGTGDYTVEISNLPPRVSWQDL 645
Query: 127 KDHMRRAGDVCFSQV 141
KD MR+AGDV F++V
Sbjct: 646 KDFMRKAGDVVFTEV 660
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 248
GIV+Y++ DMKYA+ KLD SEFR SYVRVR
Sbjct: 666 GIVEYSNKRDMKYAVEKLDDSEFRGRSENSYVRVR 700
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 101/143 (70%), Gaps = 10/143 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDA 61
SR++ +YVGNLP DT+ R++E+LF KYGPI IDLK R P +AF+EFED DA DA
Sbjct: 2 SRTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+RGRDGYNFDGY LRVEL G + G+ G SRRSD+RV+VTGLP +
Sbjct: 62 VRGRDGYNFDGYALRVELPRTGGFNRGGG---------GASGPSRRSDFRVIVTGLPPTG 112
Query: 122 SWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AGDV ++ VFRD
Sbjct: 113 SWQDLKDHMREAGDVGYADVFRD 135
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ Y ++F TG+V++ Y+DMKYAIR+LD S+FR + SY+RVRE
Sbjct: 120 HMREAGDVGYADVFRDGTGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVRE 174
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 105/152 (69%), Gaps = 9/152 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNESRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--------SRRSDYRV 112
A++ RDGY++DGYRLRVE GG R+ +R + + G ++RS YRV
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGRNEHRNNRGNERGNQREGGRGGGGRGPPTKRSQYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LVTGLPSS SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 LVTGLPSSGSWQDLKDHMREAGDVCFADTYKD 151
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA TG+V++ ++DMKYAI+KLD S FR+ Y+RVRE
Sbjct: 136 HMREAGDVCFADTYKDGTGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVGYIRVRE 190
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 108/149 (72%), Gaps = 9/149 (6%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+DA++
Sbjct: 5 RNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVK 63
Query: 64 GRDGYNFDGYRLRVELAHGGR--RHSSSMDRYSSYSSGGSRG------VSRRSDYRVLVT 115
RDGY++DGYRLRVE GG R+SSS +S GG+R +RRS +RV+VT
Sbjct: 64 ARDGYDYDGYRLRVEFPRGGGPGRYSSSSRGGNSDRGGGARDRGNRGPPARRSQFRVMVT 123
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP+S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 124 GLPASGSWQDLKDHMREAGDVCFADVYKD 152
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ + +++ TG+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 137 HMREAGDVCFADVYKDGTGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 191
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 105/148 (70%), Gaps = 8/148 (5%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+DA++
Sbjct: 5 RNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVK 63
Query: 64 GRDGYNFDGYRLRVELAHGGRRHS------SSMDRYSSYSSGGSRGV-SRRSDYRVLVTG 116
RDGY++DGYRLRVE GG S + DR S +RG +RRS +RV+VTG
Sbjct: 64 ARDGYDYDGYRLRVEFPRGGGPGSYRGSRQGNSDRNSRGGDRNNRGPPARRSQFRVMVTG 123
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LPSS SWQDLKDHMR AGDVCF+ V++D
Sbjct: 124 LPSSGSWQDLKDHMREAGDVCFADVYKD 151
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRS 255
H RE+ FA + TG+V++ ++DMKYAI+KLD S FR+ V + R
Sbjct: 136 HMREAGDVCFADVYKDGTGVVEFLRHEDMKYAIKKLDDSRFRS----HEVSKKTRGERER 191
Query: 256 YSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 312
S + R+ + S + SPR++SYSPR + R SP+ SP +
Sbjct: 192 EREKERGRERESSTCERANFIPIPIFYILSQTMSPRAKSYSPRRR--RGSPTYSPVQ 246
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R++++ED+FYKYG I IDLK PP +AF+EF+D RDAEDA+RGRDGY
Sbjct: 10 IYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
N+DGYRLRVE G R R S RRS+YRVLV+GLP + SWQDLKD
Sbjct: 69 NYDGYRLRVEFPRGTSRGGYRGGRRVGQPS-------RRSEYRVLVSGLPPTGSWQDLKD 121
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ VFRD
Sbjct: 122 HMREAGDVCYADVFRD 137
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y ++F TG+V++ +Y+DMKYA+++LD S+FR
Sbjct: 122 HMREAGDVCYADVFRDGTGVVEFLNYEDMKYAVKQLDDSKFR 163
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA+
Sbjct: 6 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVH 64
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDYRV 112
RDGY++DGYRLRVE GG ++ + SG G RG +RRS YRV
Sbjct: 65 ARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LVTGLP S SWQDLKDHMR AGDVCF+ VF+D
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVFKD 156
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 24/106 (22%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVREYDSRR 254
H RE+ + ++F TG+V++ Y+DMKYA++K D S FR+ +Y+RV+E
Sbjct: 141 HMREAGDVCFADVFKDGTGVVEFLRYEDMKYAVKKXDDSRFRSHEGEVAYIRVKE----- 195
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---SYSP 297
+ S R RS R RS SR SYSPR R +YSP
Sbjct: 196 ---------DHNSGDRGRSEDRERGRSHSR--SYSPRRRGSPTYSP 230
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA+
Sbjct: 6 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVH 64
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDYRV 112
RDGY++DGYRLRVE GG ++ + SG G RG +RRS YRV
Sbjct: 65 ARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LVTGLP S SWQDLKDHMR AGDVCF+ VF+D
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVFKD 156
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 24/106 (22%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVREYDSRR 254
H RE+ + ++F TG+V++ Y+DMKYA++KLD S FR+ +Y+RV+E
Sbjct: 141 HMREAGDVCFADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE----- 195
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---SYSP 297
+ S R RS R RS SR SYSPR R +YSP
Sbjct: 196 ---------DHNSGDRGRSEDRERGRSHSR--SYSPRRRGSPTYSP 230
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 98/140 (70%), Gaps = 7/140 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG----VSRRSDYRVLVTGLPSSASWQ 124
++DGYRLRVE R + G RG SRRS+YRV+V+GLP S SWQ
Sbjct: 78 DYDGYRLRVEFP---RSGRGGGRGGGGGALGTPRGRYGPPSRRSEYRVIVSGLPPSGSWQ 134
Query: 125 DLKDHMRRAGDVCFSQVFRD 144
DLKDHMR AGDVC++ V+RD
Sbjct: 135 DLKDHMREAGDVCYADVYRD 154
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YAIRKLD ++FR + +Y+RV+
Sbjct: 139 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAIRKLDNTKFRSHEGETAYIRVK 192
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R++++ED+FYKYG I+DIDLK PP ++F+EFED RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLK 127
++DGYRLRVE GG G G +RRS+YR LV+GLP + SWQDLK
Sbjct: 75 DYDGYRLRVEFPRGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCLVSGLPPTGSWQDLK 134
Query: 128 DHMRRAGDVCFSQVFRD 144
DHMR AGDVCF+ V+RD
Sbjct: 135 DHMREAGDVCFADVYRD 151
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ FA + TG+V++ Y+DMKYA + LD ++FR + SY+RV+E
Sbjct: 136 HMREAGDVCFADVYRDGTGVVEFLRYEDMKYAAKHLDDTKFRSHEGETSYIRVKE 190
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 96/136 (70%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR G SRRS+YRVLV+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVLVSGLPQSGSWQDLKD 135
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 136 HMREAGDVCYADVYRD 151
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + +Y++V+
Sbjct: 136 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIQVK 189
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 8/137 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EF+D RDAEDA++ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVQARDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLK 127
++DGYRLRVE G SM G RG +RRS YRVLV+GLP S SWQDLK
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSM------GPGRGRGPPARRSQYRVLVSGLPPSGSWQDLK 122
Query: 128 DHMRRAGDVCFSQVFRD 144
DHMR AGDVC++ VF+D
Sbjct: 123 DHMREAGDVCYADVFKD 139
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ Y ++F TG+V++ Y+DMKYA++KLD S FR+ SY+RVRE
Sbjct: 124 HMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 102/149 (68%), Gaps = 9/149 (6%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA+
Sbjct: 17 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVH 75
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSRG---VSRRSDYRVLVT 115
RDGY++DGYRLRVE GG SS D G SRG +RRS YRVLVT
Sbjct: 76 ARDGYDYDGYRLRVEFPRGGGPSSSFRGRGGGDSRGRGDMGNSRGRGPPARRSQYRVLVT 135
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 136 GLPPSGSWQDLKDHMREAGDVCFADVYKD 164
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA + TG+V++ Y+DMKYA++KLD S FR+ +Y+RV+E
Sbjct: 149 HMREAGDVCFADVYKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE 203
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 106/147 (72%), Gaps = 8/147 (5%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EFED RDA+DA+
Sbjct: 8 SRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPP-FAFVEFEDPRDADDAV 66
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHS----SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGL 117
R RDGY++DGYRLRVE GG + S DR+ + +RG +RRS+YRVLVTGL
Sbjct: 67 RARDGYDYDGYRLRVEFPRGGGGGARGGRSQPDRFGPRPA--ARGPPARRSEYRVLVTGL 124
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
P S SWQDLKDHMR AGDVCF+ F+D
Sbjct: 125 PPSGSWQDLKDHMREAGDVCFADTFKD 151
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVREYDSRR 254
H RE+ + + F TG+V++ ++DMKYA++KLD S FR+ SY+RV+E
Sbjct: 136 HMREAGDVCFADTFKDGTGVVEFLRHEDMKYAVKKLDDSRFRSHEGEVSYIRVKEDYGSG 195
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 290
RSP Y ++ SP Y+R SP SYSP
Sbjct: 196 GGGGLRDRSPEY---QAGSPSYTRRGSP----SYSP 224
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 96/136 (70%), Gaps = 11/136 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R R++EDLFYKYG I DI++K P RPP +AF+ FEDYRDAEDAIRGRDG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 69 NFDGYRLRVELAHG-GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
+F+G RLR E++ G G R S R RRSDYRV+V+ LP SASWQDLK
Sbjct: 61 SFEGARLRCEMSRGNGPRGSRQQPRRD----------LRRSDYRVIVSNLPPSASWQDLK 110
Query: 128 DHMRRAGDVCFSQVFR 143
DH R+ G+V ++ V R
Sbjct: 111 DHFRQVGEVVYTDVDR 126
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 200 HFRESYHNIFAGMT-------GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 248
HFR+ ++ + GIV++ S + + AI++LD +EF+N F + Y+RV+
Sbjct: 112 HFRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIKQLDDTEFKNPFDKVYIRVK 167
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 97/137 (70%), Gaps = 8/137 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EF+D RDAEDA+ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLK 127
++DGYRLRVE G SM G RG +RRS YRVLV+GLP S SWQDLK
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSM------GPGRGRGPPARRSQYRVLVSGLPPSGSWQDLK 122
Query: 128 DHMRRAGDVCFSQVFRD 144
DHMR AGDVC++ VF+D
Sbjct: 123 DHMREAGDVCYADVFKD 139
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ Y ++F TG+V++ Y+DMKYA++KLD S FR+ SY+RVRE
Sbjct: 124 HMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 97/137 (70%), Gaps = 8/137 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EF+D RDAEDA+ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLK 127
++DGYRLRVE G SM G RG +RRS YRVLV+GLP S SWQDLK
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSM------GPGRGRGPPARRSQYRVLVSGLPPSGSWQDLK 122
Query: 128 DHMRRAGDVCFSQVFRD 144
DHMR AGDVC++ VF+D
Sbjct: 123 DHMREAGDVCYADVFKD 139
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ Y ++F TG+V++ Y+DMKYA++KLD S FR+ SY+RVRE
Sbjct: 124 HMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 104/147 (70%), Gaps = 13/147 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS ++ +YVGNLP D R +++EDLF+KYG I IDLK PP +AF+EFED RDAED
Sbjct: 1 MSYKAESRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPP-FAFVEFEDPRDAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG---VSRRSDYRVLVTGL 117
A+ RDGY++DGY+LRVE G +S+ R G SRG +RRS YRV+VTGL
Sbjct: 60 AVSARDGYDYDGYKLRVEFPRG----NSARPR-----GGPSRGRGPPARRSQYRVIVTGL 110
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
P + SWQDLKDHMR AGDVC++ V++D
Sbjct: 111 PPTGSWQDLKDHMREAGDVCYADVYKD 137
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ +A + TG+V++ Y+DMKYA++KLD S FR+ S SYVRV+E
Sbjct: 122 HMREAGDVCYADVYKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHESEVSYVRVKE 176
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA+
Sbjct: 6 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVH 64
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDYRV 112
RDGY++DGYRLRVE GG ++ + SG G RG +RRS YRV
Sbjct: 65 ARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LVTGLP S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVYKD 156
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVREYDSRR 254
H RE+ FA + TG+V++ Y+DMKYA++KLD S FR+ +Y+RV+E S
Sbjct: 141 HMREAGDVCFADVYKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSSG 200
Query: 255 SYSRSPSRSPYYSRSRSRSP 274
RS R S SRS SP
Sbjct: 201 DRGRSEDRERGRSHSRSYSP 220
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA+
Sbjct: 6 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVH 64
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDYRV 112
RDGY++DGYRLRVE GG ++ + SG G RG +RRS YRV
Sbjct: 65 ARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LVTGLP S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVYKD 156
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 24/106 (22%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVREYDSRR 254
H RE+ FA + TG+V++ Y+DMKYA++KLD S FR+ +Y+RV+E
Sbjct: 141 HMREAGDVCFADVYKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE----- 195
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---SYSP 297
+ S R RS R RS SR SYSPR R +YSP
Sbjct: 196 ---------DHNSGDRGRSEDRERGRSHSR--SYSPRRRGSPTYSP 230
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 96/136 (70%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR G SRRS+YRV+V+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKD 135
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 136 HMREAGDVCYADVYRD 151
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 136 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 189
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 97/138 (70%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ VFRD
Sbjct: 138 KDHMREAGDVCYADVFRD 155
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK------ 193
Query: 255 SYSRSPSRSPYYSRSRSRS 273
RSP Y RSRSRS
Sbjct: 194 ---VDGPRSPSYGRSRSRS 209
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 100/146 (68%), Gaps = 4/146 (2%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S + +YVGNLP + R +++D+FYKYG I+ +DLKI PP +AF+EFED RDA+DA
Sbjct: 1 SGNNDCRIYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPP-FAFVEFEDKRDADDA 59
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLP 118
+ GRDGY DGYRLRVE G R GG+R SRRS+YRVLV+GLP
Sbjct: 60 VYGRDGYTLDGYRLRVEFPRGSARGGYGRSGGGGGGGGGARRGGAPSRRSEYRVLVSGLP 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
+ SWQDLKDHMR AGDVCF+ VFRD
Sbjct: 120 PTGSWQDLKDHMREAGDVCFADVFRD 145
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
H RE+ + ++F TG+V++ YDDMKYA++ LD S+FR+
Sbjct: 130 HMREAGDVCFADVFRDGTGVVEFLRYDDMKYAVKHLDDSKFRS 172
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 103/146 (70%), Gaps = 4/146 (2%)
Query: 1 MSSRSSRT--LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MSSR +YVGNLP D R ++VEDLFYKYG I ++LK PP +AF+EFED RDA
Sbjct: 1 MSSRDDVDCRVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPP-FAFVEFEDRRDA 59
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
ED++ GR+GYNFDGY+LRVE G SS+ + G SRR+D+RV+V+GLP
Sbjct: 60 EDSVHGRNGYNFDGYKLRVEHPRGNGPSQRPAYGMSSFRARGG-PPSRRTDFRVMVSGLP 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
+ SWQDLKDHMR AGDVC++ V+RD
Sbjct: 119 PTGSWQDLKDHMREAGDVCYADVYRD 144
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ + DDM++A++ LD ++FR + +Y+RV+
Sbjct: 129 HMREAGDVCYADVYRDGTGVVEFVNRDDMQFAVKHLDDTKFRSHEGETAYIRVK 182
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 103/154 (66%), Gaps = 12/154 (7%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RVLVTGLP S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 123 RVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD 156
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ FA + TG+V++ +DDMKYA++KLD S FR
Sbjct: 141 HMREAGDVCFADVYKDGTGVVEFLRHDDMKYAVKKLDDSRFR 182
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 103/148 (69%), Gaps = 5/148 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----SRRSDYRVLVTG 116
A++ RDGY++DGYRLRVE GG S +R GG G ++RS YRV+VTG
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNRNDRSRDGGRMGGRGPPAKRSQYRVMVTG 119
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 LPGSGSWQDLKDHMREAGDVCFADTYKD 147
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 132 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 186
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 103/156 (66%), Gaps = 24/156 (15%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
+RS+ +YVGNLP D + R+VE+LF KYGPI +IDLK PP +AF+EFED DA DA+
Sbjct: 2 ARSTTKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLKSRRGPP-FAFIEFEDELDAADAV 60
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSRRS 108
RGRDGYNFDGY LRVE GG +SY+ G G SRRS
Sbjct: 61 RGRDGYNFDGYALRVEFPRGGT---------ASYNGSGGNFNSFRRGGFGRGGGGPSRRS 111
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
D+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD
Sbjct: 112 DFRVVVTGLPPTGSWQDLKDHMREAGDVGYADVFRD 147
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ Y ++F TG+V++ Y+DMKYA+RKLD S+FR + SY+RVRE
Sbjct: 132 HMREAGDVGYADVFRDGTGVVEFLRYEDMKYAVRKLDDSKFRSHEGESSYIRVRE 186
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 97/138 (70%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ VFRD
Sbjct: 138 KDHMREAGDVCYADVFRD 155
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 97/138 (70%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ VFRD
Sbjct: 137 KDHMREAGDVCYADVFRD 154
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 139 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG S +R + + ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNRNDRNNGRDGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
TGLP S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 TGLPPSGSWQDLKDHMREAGDVCFADTYKD 149
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 134 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 91/137 (66%), Gaps = 5/137 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R REVEDLF KYG +V ID+K P RPP +AF+EF D RDAEDA+RGRDGY
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G RLRVELA G R++ +RVLV GLP SASWQDLKD
Sbjct: 72 DFYGNRLRVELAKGAGGRGR-----GFGGGPPPGFRPRQTGFRVLVKGLPMSASWQDLKD 126
Query: 129 HMRRAGDVCFSQVFRDR 145
H+R+ ++ VFRDR
Sbjct: 127 HVRQVCKPAYTNVFRDR 143
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Query: 204 SYHNIF---AGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 249
+Y N+F G+TG+V++ + DDM+ IRKLD +EFRN F R+YVRV E
Sbjct: 135 AYTNVFRDRDGVTGVVEFETADDMERTIRKLDDTEFRNPFDRAYVRVVE 183
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 97/138 (70%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ VFRD
Sbjct: 137 KDHMREAGDVCYADVFRD 154
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y ++F TG+V++ +DM YA+RKLD ++FR
Sbjct: 139 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFR 180
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 12/154 (7%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RVLV+GLP S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 123 RVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD 156
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVREYDSRR 254
H RE+ FA + TG+V++ +DDMKYA++KLD S FR+ +Y+RV+E S
Sbjct: 141 HMREAGDVCFADVYKDGTGVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSGG 200
Query: 255 SYSRSPSRS 263
RS R
Sbjct: 201 DRGRSEDRE 209
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQD 125
++DGYRLRVE GR SRRS+YRV+V+GLP S SWQD
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGFGGGGVGGAPRGRYGPPSRRSEYRVIVSGLPQSGSWQD 136
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ VFRD
Sbjct: 137 LKDHMREAGDVCYADVFRD 155
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y ++F TG+V++ +DM YA+RKLD ++FR + +YVRV+
Sbjct: 140 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYVRVK 193
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 12/154 (7%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA
Sbjct: 5 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDA 63
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 64 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 123
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RVLV+GLP S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 124 RVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD 157
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ FA + TG+V++ +DDMKYA++KLD S FR
Sbjct: 142 HMREAGDVCFADVYKDGTGVVEFLRHDDMKYAVKKLDDSRFR 183
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGV--SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG R ++ DR ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
TGLP S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKD 149
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 134 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGV--SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG R ++ DR ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
TGLP S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKD 149
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 134 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGV--SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG R ++ DR ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
TGLP S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKD 149
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 134 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR + G SRRS+YRV+V+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGIGGA-PRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKD 134
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 135 HMREAGDVCYADVYRD 150
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 135 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 188
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQD 125
++DGYRLRVE GR SRRS+YRV+V+GLP S SWQD
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQD 137
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V+RD
Sbjct: 138 LKDHMREAGDVCYADVYRD 156
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 141 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 194
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 145 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 204
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 205 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 264
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 265 KDHMREAGDVCYADVYRD 282
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 267 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 320
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 17/154 (11%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +YVGNLP R ++VED+F KYG ++ +DLK R P +AF+EFED RDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGKVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR------------RSDY 110
RGRDGY+++GYRLRVE G Y +G + +SR R++Y
Sbjct: 60 RGRDGYDYEGYRLRVEFPRGLGPRGPGG---RPYDTGRNLSLSRNASGGGSSSGGRRANY 116
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V+GLP+S SWQDLKDHMR AGDVC++ V RD
Sbjct: 117 RVIVSGLPASGSWQDLKDHMREAGDVCYTDVLRD 150
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++ TGIV+Y Y+DMKYA+RKLD ++F+ + SY+RVRE D+
Sbjct: 135 HMREAGDVCYTDVLRDGTGIVEYGRYEDMKYALRKLDDTKFKSHEGETSYIRVRE-DNGE 193
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 290
S + S SRSP SR SP YS S S S S S+SP
Sbjct: 194 SRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 102/155 (65%), Gaps = 13/155 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S R+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+DA
Sbjct: 3 SGRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDNRDADDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGG-----------RRHSSSMDRYSSYSSGGSRGV-SRRSD 109
++ RDGY++DGYRLRVE GG G +RG +RRS
Sbjct: 62 VKARDGYDYDGYRLRVEFPRGGGPGSYRGSRGSTSGDRGGGSSGRDRGGNNRGPPARRSQ 121
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+RV+VTGLP+S SWQDLKDHMR AGDVCF+ V++D
Sbjct: 122 FRVVVTGLPASGSWQDLKDHMREAGDVCFADVYKD 156
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE---YD 251
H RE+ FA + TG+V+Y ++DMKYAI+KLD S FR+ +Y+RVRE D
Sbjct: 141 HMREAGDVCFADVYKDGTGVVEYLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGND 200
Query: 252 SRRSYSRSPSRSPYYSRSRSRSPYYS 277
RR RS Y R R +P YS
Sbjct: 201 DRRGGGEHRDRS-YSPRRRRGTPTYS 225
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK +AF+EFED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ VFRD
Sbjct: 137 KDHMREAGDVCYADVFRD 154
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 139 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR SRRS+ RV+V+GLP S SWQDLKD
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRRGRYGPP---------SRRSENRVVVSGLPPSGSWQDLKD 128
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 129 HMREAGDVCYADVYRD 144
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 129 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 170
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 82 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 141
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 142 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 201
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 202 KDHMREAGDVCYADVYRD 219
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 204 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 257
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 104/152 (68%), Gaps = 9/152 (5%)
Query: 1 MSSRSSRT--LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MSSR +YVGNLP D R ++VEDLF+++G + +DLK PP + F+EFED+RDA
Sbjct: 1 MSSRGGNENRIYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPP-FVFVEFEDHRDA 59
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGG------RRHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
DA++ R Y++DGY+LRVE GG R S++ S G +R +RRS YRV
Sbjct: 60 SDAVKARSNYDYDGYKLRVEFPRGGGPGSSYRGRSNNDRGGSGRGGGNNRPAARRSQYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LV+GLPSS SWQDLKDHMR AGDVCF+ V++D
Sbjct: 120 LVSGLPSSGSWQDLKDHMREAGDVCFADVYKD 151
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 108 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 167
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 168 KDHMREAGDVCYADVYRD 185
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 170 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 223
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 94/141 (66%), Gaps = 26/141 (18%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI-----PPRPPGYAFLEFEDYRDAEDAIR 63
+YVGNLP D R +++ D+FYKYG I D+DLK PP +AF+EFED RDAEDA++
Sbjct: 11 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP----FAFVEFEDPRDAEDAVK 66
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
GRDG+ FDGYR+RVE + GGS RRSD+RV V+GLP + SW
Sbjct: 67 GRDGHEFDGYRIRVE-----------------FPRGGSGPPPRRSDFRVQVSGLPPTGSW 109
Query: 124 QDLKDHMRRAGDVCFSQVFRD 144
QDLKDHMR AGDV F+ VF+D
Sbjct: 110 QDLKDHMREAGDVLFTDVFKD 130
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 110 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 169
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 170 KDHMREAGDVCYADVYRD 187
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 252
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + Y R+ +D
Sbjct: 172 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFFDQ 227
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 96/143 (67%), Gaps = 3/143 (2%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
RS +YVGNLP D R R++E F ++G +V +DLK PP +AF+EFED RDAEDA+R
Sbjct: 7 RSDARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPP-FAFVEFEDARDAEDAVR 65
Query: 64 GRDGYNFDGYRLRVELAHGGRRHS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+DGY DGY+LRVE G H + +R + +G SR + +R ++GLP+S
Sbjct: 66 YKDGYELDGYKLRVEFPRGSGVHPGYNQRNRMLAGRNGCRTNASRHTGFRCYISGLPASG 125
Query: 122 SWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AGDVCFS V+++
Sbjct: 126 SWQDLKDHMREAGDVCFSDVYKN 148
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS + +Y+GNLP D R R++EDLFYKYG I+ I LK R P +AF+EFED RDAED
Sbjct: 1 MSRYNECRIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPS 119
AI GRDGY+FDG RLRVE GG R + G +RRSD+RV+V+GLP
Sbjct: 61 AIDGRDGYDFDGCRLRVEAPRGGGGGGGDYGRRGRGNGSGGGRGPARRSDHRVIVSGLPQ 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRD 144
+ SWQDLKDHMR AG+V F+ V+RD
Sbjct: 121 TGSWQDLKDHMREAGEVYFADVYRD 145
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ FA + TG+V++ Y D+KYA++ LD S+FR + SYVRV+E D R
Sbjct: 130 HMREAGEVYFADVYRDGTGVVEFAHYSDVKYALKHLDDSKFRSHEGETSYVRVKE-DRGR 188
Query: 255 SYSRSP 260
S SRSP
Sbjct: 189 SRSRSP 194
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 103/157 (65%), Gaps = 15/157 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+ R +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAED
Sbjct: 1 MSNNDCR-IYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPP-FAFVEFDDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS-------------SMDRYSSYSSGGSRGVSRR 107
A+ RDGY++DGYRLRVE G H S + S S +RR
Sbjct: 59 AVHARDGYDYDGYRLRVEFPRGNGPHRSGGGGGSSSGGGSYNRGGASGGSGRSRGPPARR 118
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S YRVLVTGLP+S SWQDLKDHMR AGDVC++ V++D
Sbjct: 119 SQYRVLVTGLPASGSWQDLKDHMREAGDVCYADVYKD 155
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 252
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + Y R+ +D
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFFDQ 195
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 97/148 (65%), Gaps = 12/148 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------SRRSDYRVLVTG 116
++DGYRLRVE GR GG G SRRS+YRV+V+G
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSG 136
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 137 LPPSGSWQDLKDHMREAGDVCYADVFRD 164
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 149 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 202
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 95/136 (69%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EFED RDAEDA RDGY
Sbjct: 10 IYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFEDPRDAEDAAHARDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE G S+ R G +RRS YRVLV+GLP S SWQDLKD
Sbjct: 69 DYDGYRLRVEFPRG-----SAPGRGGMGPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKD 123
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ VF+D
Sbjct: 124 HMREAGDVCYADVFKD 139
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 99/154 (64%), Gaps = 18/154 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------------SRRSDY 110
++DGYRLRVE GR SGG G SRRS+Y
Sbjct: 108 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 167
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 168 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD 201
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 186 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 239
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 99/154 (64%), Gaps = 18/154 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------------SRRSDY 110
++DGYRLRVE GR SGG G SRRS+Y
Sbjct: 110 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 169
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 170 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD 203
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 188 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 241
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
+SR+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EFED RDA+DA
Sbjct: 3 NSRNDCRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFEDPRDADDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSS 120
+ RDGY++DGYRLRVE GG S R SRG +RRS +RVLVTGLP S
Sbjct: 62 VHARDGYDYDGYRLRVEFPRGGGHGSFRGGRGGGDRGRSSRGPPARRSQFRVLVTGLPPS 121
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AGDVCF+ F+D
Sbjct: 122 GSWQDLKDHMREAGDVCFADAFKD 145
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRR++ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRAENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
H RE+ Y +++ TG+V+ +DM YA+RKLD ++FR
Sbjct: 140 HMREAGDVCYADVYRDGTGVVECVPKEDMTYAVRKLDNTKFR 181
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYK+G I DIDLK P +AF+EFED RD+ DA+ RDGY
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GGR G SRRSDYRV+V+GLP S SWQDLKD
Sbjct: 77 DYDGYRLRVEFPRGGRGGGGRGMGPPRTRYGPP---SRRSDYRVVVSGLPQSGSWQDLKD 133
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 134 HMREAGDVCYTDVYRD 149
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 134 HMREAGDVCYTDVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 187
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 97/149 (65%), Gaps = 13/149 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRRSDYRVLVT 115
++DGYRLRVE GR GG G SRRS+YRV+V+
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVS 136
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 137 GLPPSGSWQDLKDHMREAGDVCYADVFRD 165
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 150 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 203
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVEL------AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
A++ RDGY++DGYRLRVE + + R GG ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
TGLP+S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 TGLPASGSWQDLKDHMREAGDVCFADTYKD 149
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 134 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVEL------AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
A++ RDGY++DGYRLRVE + + R GG ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
TGLP+S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 TGLPASGSWQDLKDHMREAGDVCFADTYKD 149
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 134 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED +DAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVYRDGTGAVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 99/154 (64%), Gaps = 18/154 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 37 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 96
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------------SRRSDY 110
++DGYRLRVE GR SGG G SRRS+Y
Sbjct: 97 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 156
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 157 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD 190
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 175 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 228
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D + E+EDLFYKYG I+DI+LKIPPRPP Y F+EFE RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY 96
AIR RDGYNFDG RLRVELAHGGR SSS DR SSY
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGGRGPSSS-DRRSSY 95
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 103/152 (67%), Gaps = 10/152 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDA 61
SR++ +YVGNLP D + R++E+LF KYGPI IDLK R P +AF+EFED DA DA
Sbjct: 2 SRTTHKIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGG---------RRHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
+RGRDGYNFDGY LRVEL G + ++ GGS G SRRSD+RV
Sbjct: 62 VRGRDGYNFDGYALRVELPRTGSYNNGNGGPNNNQFRRGGFNRGGGGGSSGPSRRSDFRV 121
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+VTGLP + SWQDLKDHMR AGDV ++ VFRD
Sbjct: 122 IVTGLPPTGSWQDLKDHMREAGDVGYADVFRD 153
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ Y ++F TG+V++ Y+DMKYAIR+LD S+FR + SY+RVRE
Sbjct: 138 HMREAGDVGYADVFRDGTGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVRE 192
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 10/153 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
A++ RDGY++DGYRLRVE GG S + + G G ++RS YR
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRNRDGGGGGGRMGGRGPPAKRSQYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V+VTGLP+S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 120 VMVTGLPTSGSWQDLKDHMREAGDVCFADTYKD 152
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA +G+V++ ++DMKYAI+KLD S FR+ +Y+RVRE
Sbjct: 137 HMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 191
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 99/151 (65%), Gaps = 16/151 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R++++ED+FYKYG I+DIDLK PP ++F+EFED RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGYRLRVEL---------------AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL 113
++DGYRLRVE GG G +RRS+YR L
Sbjct: 75 DYDGYRLRVEFPRGGRAGGGPPRGIGGGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCL 134
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V+GLP + SWQDLKDHMR AGDVCF+ V+RD
Sbjct: 135 VSGLPPTGSWQDLKDHMREAGDVCFADVYRD 165
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ FA + TG+V++ Y+DMKYA + LD ++FR + SY+RV+E
Sbjct: 150 HMREAGDVCFADVYRDGTGVVEFLRYEDMKYAAKHLDDTKFRSHEGETSYIRVKE 204
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 99/157 (63%), Gaps = 21/157 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS-----------------RG----VSRR 107
++DGYRLRVE GR GG RG SRR
Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD 174
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 159 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 212
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYYGYRLRVEFPPSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 97/146 (66%), Gaps = 3/146 (2%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRD 66
T+YVGNLP D R +E+ED+F+KYG I +ID+K R P +AF++F+D RDA++A+R RD
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQ 124
GY FDG RLRVE G S G + G +RS+YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 125 DLKDHMRRAGDVCFSQVFRDRGELHW 150
D+KDH+++AG++C++ V G + +
Sbjct: 125 DIKDHLKQAGEICYANVHNGEGVVEF 150
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 39/155 (25%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRS 263
Y N+ G G+V++ Y+D++YA RK D ++FR + +Y+R++E +S
Sbjct: 138 YANVHNG-EGVVEFERYEDLEYAFRKYDDTKFRSHKGETAYIRLKE-----------DKS 185
Query: 264 PYYSRSRSRSPYYSRSRSPSRSWSY--------------SPRSRSYSPRGKYSR-RSPSL 308
Y ++ R+ SRS+SP R S + +SRS SP ++ R RS S
Sbjct: 186 EYAKENKRRTRSISRSKSPIRGRSSSRSKSSIRGRRTGSASKSRSRSPVSRHHRDRSESG 245
Query: 309 SPARSASQ-----------RSPSGSPPRSFSRSGS 332
SPAR S+ RS SG+P R +RS S
Sbjct: 246 SPARRVSRSRSPISRQRPARSESGTPARRATRSRS 280
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 105/172 (61%), Gaps = 21/172 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D ++++D+FYK+G IVDIDLK P RPP + F+ F+D RDAE+A+R RDGY
Sbjct: 4 IYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGY 63
Query: 69 NFDGYRLRVELAHGGR------------RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
+ DG RLRVE++ G R R M G ++++YRV+VTG
Sbjct: 64 DMDGSRLRVEISRGRRDPFGMGGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVIVTG 123
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQV---------FRDRGELHWRMLRFWGGE 159
LP SASWQDLKDHMR+AG+ ++ V FR R ++ + + + G +
Sbjct: 124 LPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMDYALRKLDGSD 175
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 204 SYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 247
+Y ++ GIV + + DDM YA+RKLD S+FRN F +S + V
Sbjct: 144 TYTDVDHKGGGIVHFRTRDDMDYALRKLDGSDFRNPFEKSRISV 187
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 97/147 (65%), Gaps = 11/147 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VEDLFYKYG I DIDLK P +AF++F+D RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-----------SRRSDYRVLVTGL 117
++DGYRLRVE GR GG G SRRS+ RV+V+GL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGGGGGGMGPPRGRYGPPSRRSENRVVVSGL 136
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
P S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 137 PPSGSWQDLKDHMREAGDVCYADVFRD 163
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 148 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 201
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 103/151 (68%), Gaps = 11/151 (7%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +YVGNLP R ++VED+F KYG ++ +DLK R P +AF+EFED RDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSS---------YSSGGSRGVSRRSDYRVL 113
RGRDGY+++GYRLRVE G Y S GGS SRR++YRV+
Sbjct: 60 RGRDGYDYEGYRLRVEFPRGLGPRGPGGRPYDSGRNLSVSRSAGGGGSSSGSRRANYRVI 119
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V+GLP+S SWQDLKDHMR AGDVC++ V RD
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD 150
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++ TGIV+Y Y+DMKYA+RKLD ++F+ + SY+RV+E D+
Sbjct: 135 HMREAGDVCYTDVLRDGTGIVEYGRYEDMKYALRKLDDTKFKSHEGETSYIRVKE-DNGE 193
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 290
S + S SRSP SR SP YS S S S S S+SP
Sbjct: 194 SRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYYGYRLRVEFPRSGRGTGRGGSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 138 KDHMREAGDVCYADVYRD 155
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 140 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAED + GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 107
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 108 DYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 167
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 168 KDHMREAGDVCYADVYRD 185
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR+
Sbjct: 170 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 212
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 97/146 (66%), Gaps = 3/146 (2%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRD 66
T+YVGNLP + R +E+ED+F+KYG I +ID+K R P +AF++F+D RDA++A+R RD
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQ 124
GY FDG RLRVE G S G + G +RS+YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 125 DLKDHMRRAGDVCFSQVFRDRGELHW 150
D+KDH+++AG++C++ V G + +
Sbjct: 125 DIKDHLKQAGEICYANVHNGEGVVEF 150
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 26/153 (16%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDS-------RRSY 256
Y N+ G G+V++ Y+D++YAIRK D ++FR + +Y+R++E S RR+
Sbjct: 138 YANVHNG-EGVVEFERYEDLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTR 196
Query: 257 SRSPSRSPYYSRSRSR--------------SPYYSRSRSPSRSWSYSPRSRSYSPRGKYS 302
S S S+SP R S SRSRSP S + RS S SP + S
Sbjct: 197 SISRSKSPIRGRCSRSSSRSKSSIRGRRNGSASKSRSRSPV-SRQHRDRSESGSPARRVS 255
Query: 303 RRSPSLSPARSASQRSPSGSPPRSFSRSGSFAR 335
R +S R A RS SG+P R +RS S R
Sbjct: 256 RSRSPISRQRRA--RSESGTPARRATRSRSPVR 286
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAED + GRDGY
Sbjct: 70 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 129
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRR + RV+V+GLP S SWQDL
Sbjct: 130 DYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSRRCENRVVVSGLPPSGSWQDL 189
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 190 KDHMREAGDVCYADVYRD 207
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG++++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 192 HMREAGDVCYADVYRDGTGVMEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 245
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 96/146 (65%), Gaps = 3/146 (2%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRD 66
T+YVGNLP D R +E+ED+F+KYG I +ID+K R P +AF++F+D RDA++A+R D
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQ 124
GY FDG RLRVE G S G + G +RS+YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGKGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 125 DLKDHMRRAGDVCFSQVFRDRGELHW 150
D+KDH+++AG++C++ V G + +
Sbjct: 125 DIKDHLKQAGEICYANVHNGEGVVEF 150
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 34/148 (22%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE-------YDSRRSY 256
Y N+ G G+V++ Y++++YAIRK D ++FR + +Y+R++E + RR+
Sbjct: 138 YANVHNG-EGVVEFERYENLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTR 196
Query: 257 SRSPSRSPYY----------------------SRSRSRSPYYSRSRSPSRSWSYSPR-SR 293
S S S+SP S+SRSRSP + R S S S + R SR
Sbjct: 197 SISRSKSPNRGRCSRSSSRSKSSIRGRRTGSASKSRSRSPVSRQHRDRSESGSPARRVSR 256
Query: 294 SYSPRGKYSR-RSPSLSPARSASQ-RSP 319
S SP + R RS S +PAR A++ RSP
Sbjct: 257 SRSPISRQRRARSESGTPARRATRSRSP 284
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
Query: 28 YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 87
Y+YG I+DIDLKIPPRPP YA +EFED DA+DAI GRD YNFDGYRL + +A
Sbjct: 269 YQYGRILDIDLKIPPRPPRYAVVEFEDPHDADDAIYGRDEYNFDGYRLLLIVAEASLILM 328
Query: 88 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGE 147
S ++ G V+VTGLPSS SWQDLKDHMRRAGDVCFS V+R+ GE
Sbjct: 329 IVQAAISVHAVEVFLGA--LISMVVMVTGLPSSVSWQDLKDHMRRAGDVCFSDVYREVGE 386
Query: 148 LHW 150
W
Sbjct: 387 WMW 389
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 16/158 (10%)
Query: 2 SSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
SSR++ +YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EFED RDAED
Sbjct: 3 SSRNNEARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPP-FAFVEFEDPRDAED 61
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--------------SR 106
A+ RDGY++DGYRLRVE G + G G +R
Sbjct: 62 AVHARDGYDYDGYRLRVEFPRGSQNSGGGHSGGRGGDGGRGGGDGGGSNGGGRSRGPPAR 121
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
R++YRV+VTGLP + SWQDLKDHMR AGDVC++ ++D
Sbjct: 122 RTNYRVIVTGLPPTGSWQDLKDHMREAGDVCYADTYKD 159
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ Y + + TG+V++ Y+DMKYAI+KLD S FR+ SYVRV+E
Sbjct: 144 HMREAGDVCYADTYKDGTGMVEFLRYEDMKYAIKKLDDSRFRSHEGEVSYVRVKE 198
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 94/152 (61%), Gaps = 13/152 (8%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I +D+K R P +AF+EFED+RDAEDA+R
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 65 RDGYNFDGYRLRVELAHG-------GRRHSSSMDRYSSYSSGGSRGVSRRSD-----YRV 112
RDGY FDG R+RVE G GR D GG G YRV
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRV 125
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+V GLP + SWQDLKDHMR AGDVC++ V RD
Sbjct: 126 IVEGLPPTGSWQDLKDHMRDAGDVCYADVARD 157
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H R++ Y ++ TG+V++T Y+D+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 142 HMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 96/151 (63%), Gaps = 8/151 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R +Y+GNLP D R R++EDLFYKYG I ID+K+ P +AF+EF+D RDA D
Sbjct: 41 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 99
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSRGVSRRSDYRVL 113
AIRGRDGY DG R+RVE+ G G RG RRS YRVL
Sbjct: 100 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPLYGPDRGERDRRPPPPRGPPRRSGYRVL 159
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
VTGLP + SWQDLKDHMR AGD+C++ VF+D
Sbjct: 160 VTGLPVTGSWQDLKDHMREAGDICYADVFKD 190
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ Y ++F TG+V+YT DDMKYAI+KLD ++F+ + SY+RV+E
Sbjct: 175 HMREAGDICYADVFKDGTGVVEYTRQDDMKYAIKKLDDTKFKSHEGETSYIRVKE 229
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 99/152 (65%), Gaps = 9/152 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +Y+GNLP D + R++EDLFYKYG I ID+K+ P +AF+EF+D RDA D
Sbjct: 1 MGSRRESRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRR--------HSSSMDRYSSYSSGGSRGVSRRSDYRV 112
A+ GRDGY+ DG R+RVE+ G ++S DR RRS YRV
Sbjct: 60 AVHGRDGYDMDGCRIRVEMTRGVGPRGPGGRPLYASERDRDRRPPPAPRGPPPRRSGYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+V+GLPSS SWQDLKDHMR AGD+C++ V+RD
Sbjct: 120 IVSGLPSSGSWQDLKDHMRDAGDICYADVYRD 151
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 16/151 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R +++ED+F K+G ++ +DLK RPP +AF+EFED RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGYRLRVELA-------------HGGRR--HSSSMDRYSSYSSGGSRGVSRRSDYRVL 113
+F GYRLRVE HG R S D GSR RR++YRV+
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
VTGLP+S SWQDLKDHMR AGDVC++ + RD
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD 156
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y +I TG+V+Y DDMKYAIRKLD ++F+ + +Y+RVRE D
Sbjct: 141 HMREAGDVCYADITRDGTGVVEYARLDDMKYAIRKLDDTKFKSHEGETAYIRVRE-DDIN 199
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 289
RS SRSP +R+ SP YS SRS S S
Sbjct: 200 GGGRSRSRSP-MARATRGSPQYSPKGGRSRSRSTS 233
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 96/151 (63%), Gaps = 8/151 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R +Y+GNLP D R R++EDLFYKYG I ID+K+ P +AF+EF+D RDA D
Sbjct: 1 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSRGVSRRSDYRVL 113
AIRGRDGY DG R+RVE+ G G RG RRS YRVL
Sbjct: 60 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPLYGPDRGERDRRPPPPRGPPRRSGYRVL 119
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
VTGLP + SWQDLKDHMR AGD+C++ VF+D
Sbjct: 120 VTGLPVTGSWQDLKDHMREAGDICYADVFKD 150
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 105/187 (56%), Gaps = 19/187 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R ++VGNLP D + R++ED+FYKYG I ID+K P +AF+EF+D RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFVEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG--VSRRSDYRVLVTGLP 118
A+ GRDGY+FDG R+RVEL G R RRS YRV+++GLP
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRHGPPPRRSGYRVVISGLP 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRG----------------ELHWRMLRFWGGEVNW 162
+ SWQDLKDHMR AG++C++ VFRD +L + GEV +
Sbjct: 120 DTGSWQDLKDHMRDAGEICYADVFRDGTGVVEYTNYEDMKYALRKLDDTKFKSHEGEVTY 179
Query: 163 GEIREAG 169
+REA
Sbjct: 180 IRVREAN 186
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 16/151 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R +++ED+F K+G ++ +DLK RPP +AF+EFED RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGYRLRVELA-------------HGGRR--HSSSMDRYSSYSSGGSRGVSRRSDYRVL 113
+F GYRLRVE HG R S D GSR RR++YRV+
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
VTGLP+S SWQDLKDHMR AGDVC++ + RD
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD 156
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN---AFSRSYVRVREYD 251
H RE+ Y +I TG+V+Y DDMKYAIRKLD ++F++ +Y+RVRE D
Sbjct: 141 HMREAGDVCYADITRDGTGVVEYARLDDMKYAIRKLDDTKFKSHEFQGETAYIRVREDD 199
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D + R++EDLF+KYG I DI+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGYRLRVELAH-GGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
F +LRVE G + S G +RRS++RV+VTGLP + SWQDLK
Sbjct: 66 GFGDCKLRVEYPRSSGSKFSGPAGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQDLK 125
Query: 128 DHMRRAGDVCFSQVFRD 144
DHMR AGDVCF+ V RD
Sbjct: 126 DHMREAGDVCFADVQRD 142
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGMT----GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ FA + G+V++ +DM+YA+R+LD +EFR + +Y+RV E
Sbjct: 127 HMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVME 181
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 94/154 (61%), Gaps = 17/154 (11%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I +D+K R P +AF+EFED+RDAEDA+R
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 65 RDGYNFDGYRLRVE--------------LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDY 110
RDGY FDG R+RVE L GG G RR+ Y
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGR--GGGPQRRTGY 123
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RV+V GLP + SWQDLKDHMR AGDVC++ V RD
Sbjct: 124 RVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD 157
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H R++ Y ++ TG+V++T Y+D+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 142 HMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 96/139 (69%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 107
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 108 DYGQCRLRVEFPRTYGGR---------AGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 158
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 159 LKDHMREAGDVCYADVQKD 177
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 162 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 214
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 94/150 (62%), Gaps = 24/150 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGY--------------AFLEFED 54
+YVGNLP D R +++ED+FYK+G + DIDLK RPP + AF+EF D
Sbjct: 18 IYVGNLPPDIREKDIEDMFYKFGSVADIDLK-NKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 55 YRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
RDA+DA+ RDGYN+DGYR+RVE G + S R S YRV+V
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRGTKGFKGSRPRGPPPRR---------SSYRVIV 127
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+GLPS+ SWQDLKDHMR AGDVC++ V+RD
Sbjct: 128 SGLPSTGSWQDLKDHMREAGDVCYADVYRD 157
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DMKYA+++LD ++FR + SY+RV+
Sbjct: 142 HMREAGDVCYADVYRDGTGVVEFLRPEDMKYAVKQLDDTKFRSHEGDVSYIRVK 195
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 96/139 (69%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 10 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 69
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 70 DYGQCRLRVEFPRTYGGR---------AGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 120
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 121 LKDHMREAGDVCYADVQKD 139
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 124 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 176
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 95/150 (63%), Gaps = 7/150 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +YVGNLP + + R++EDLF KYG I ID+K P +AFLEFED RDAED
Sbjct: 1 MGSRRDCRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAP-FAFLEFEDSRDAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLV 114
AIRGRDGY+ DG R+RVE+ G R + R S YRV++
Sbjct: 60 AIRGRDGYDLDGCRIRVEMTRGVGPRGPGGRPIYGGGGYDRRPPAPRGPPVRRSGYRVII 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+GLP+S SWQDLKDHMR AGD+C++ V++D
Sbjct: 120 SGLPASGSWQDLKDHMRDAGDICYADVYKD 149
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 94/155 (60%), Gaps = 16/155 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I ID+K R P +AF+EFED+RDAEDA+R
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSS---------------YSSGGSRGVSRRSD 109
RDGY FDG R+RVE G + G G RR+
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRGPGGRPLNEEGGGYRGGGDFRGGRGGGRGGGGPQRRTG 125
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD
Sbjct: 126 YRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD 160
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ Y ++ TG+V++T YDD+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 145 HMREAGDVCYADVARDGTGVVEFTRYDDVKYAVRKLDDTKFRSHEGETAYIRVRE 199
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 102/151 (67%), Gaps = 11/151 (7%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +YVGNLP R ++VED+F KYG ++ +DLK R P +AF+EFED RDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSS---------YSSGGSRGVSRRSDYRVL 113
RGRDGY+++GYRLRVE G Y S GGS SRR+ YRV+
Sbjct: 60 RGRDGYDYEGYRLRVEFPRGLGPRGPGGRPYDSGRNLSVSRSACGGGSSSGSRRASYRVI 119
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V+GLP+S SWQDLKDHMR AGDVC++ V RD
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD 150
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++ TGIV+Y Y+DMKYA+RKLD ++F+ + SY+RV+E D+
Sbjct: 135 HMREAGDVCYTDVLRDGTGIVEYGRYEDMKYALRKLDDTKFKSHEGETSYIRVKE-DNGE 193
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 290
S + S SRSP SR SP YS S S S S S+SP
Sbjct: 194 SRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 94/161 (58%), Gaps = 22/161 (13%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
++VGNLPGD R RE+EDLFYKYG I +IDLK+PPRPP +AF+EFE AEDA++GRDG
Sbjct: 7 VIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGRDG 66
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYS-----------------SYSSGGSRGV-----S 105
Y FD +RVEL+ GG S D+ S ++ V
Sbjct: 67 YVFDNNPIRVELSRGGMGGRSGGDKTSGAPPRDRDEPRGGGGGATFGRAAPPPVPSNFRQ 126
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
+ S YR V LP SASWQDLKDH R+ + VFRDRG
Sbjct: 127 KGSAYRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRG 167
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 194
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +G R + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 195 DYGQCRLRVEFPRTYGSR---------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 245
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 246 LKDHMREAGDVCYADVQKD 264
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 249 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 301
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 96/156 (61%), Gaps = 17/156 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I ID+K R P +AF+EFED+RDAEDA+R
Sbjct: 8 EDQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRA 66
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSS---MDRYSSYSSGGSRGVSRRSD------------ 109
RDGY FDG R+RVE G ++ YS G RG R
Sbjct: 67 RDGYEFDGRRIRVEFTRGVGPRGPGGRPLNDDGGYSGGRDRGDYRGGRGGGRGGGPQRRT 126
Query: 110 -YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD
Sbjct: 127 GYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD 162
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ +A + TG+V++T YDD+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 147 HMREAGDVCYADVARDGTGVVEFTRYDDVKYAVRKLDDTKFRSHEGETAYIRVRE 201
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 94/139 (67%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R R++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + G G +RRSD+RVLV+GLP S SWQD
Sbjct: 77 DYGQCRLRVEFPRTYGGR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQD 127
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 128 LKDHMREAGDVCYADVQKD 146
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 131 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 95/142 (66%), Gaps = 7/142 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLPGD R R++ED+FYKYG +VD+DL P +AF+EFED RDA+DAIRGRDGY
Sbjct: 11 VYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETP-FAFIEFEDPRDADDAIRGRDGY 69
Query: 69 NFDGYRLRVELAHGG------RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
FDGY+LRVEL R G RG R+S +++++TGLP + S
Sbjct: 70 MFDGYKLRVELPRSSPRYVGGRGGGGRGYYGGGRRDGYGRGGGRQSGHKLMITGLPPTGS 129
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQD+KDH R+AGDV ++ V RD
Sbjct: 130 WQDIKDHFRQAGDVIYANVERD 151
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YVRVRE 249
HFR++ I+A + TG+V++ Y+ K A+R LD S+FR+ S Y+RV E
Sbjct: 136 HFRQAGDVIYANVERDGTGVVEFARYEHAKRAVRDLDDSKFRSHEGESAYIRVSE 190
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R ++VGNLP D + R++ED+FYKYG I ID+K P +AF+EF+D RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSRRSDYRVLVTGLP 118
A+ GRDGY+FDG R+RVEL G S RRS YRV+V+GLP
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDSRSPRRGPPPRRSGYRVIVSGLP 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
+ SWQDLKDHMR AG++C++ VFRD
Sbjct: 120 DTGSWQDLKDHMRDAGEICYADVFRD 145
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + G G +RRSD+RVLV+GLP S SWQD
Sbjct: 77 DYGQCRLRVEFPRTYGGR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQD 127
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 128 LKDHMREAGDVCYADVQKD 146
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 131 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 93/138 (67%), Gaps = 10/138 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
++ RLRVE A+GGR R +RRSD+RVLV+GLP S SWQDL
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRASRNGP--------PTRRSDFRVLVSGLPPSGSWQDL 127
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V +D
Sbjct: 128 KDHMREAGDVCYADVQKD 145
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +G R + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 76 DYGQCRLRVEFPRTYGSR---------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 126
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 127 LKDHMREAGDVCYADVQKD 145
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 12/139 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +G R + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 76 DYGQCRLRVEFPRTYGSR---------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 126
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVC++ V +D
Sbjct: 127 LKDHMREAGDVCYADVQKD 145
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 91/153 (59%), Gaps = 10/153 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS + +YVGNLP D R R++EDLFYK+G I +DLK PP + F+EFED RDA D
Sbjct: 1 MSRGNDVRVYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPP-FCFVEFEDPRDASD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS---------DYR 111
A+ RDGYN+DGY LRVE GG S +YR
Sbjct: 60 AVHERDGYNYDGYTLRVEFPRGGGPGGSRSRGGGGGYGFRGGRGPPGGRGGPPSRRSEYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
VLV+GLP S SWQDLKDHMR AGDVC++ V++D
Sbjct: 120 VLVSGLPPSGSWQDLKDHMREAGDVCYTDVYKD 152
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ Y +++ TG+V++ +DMK+A+ KLD ++FR+ SY+RV+E
Sbjct: 137 HMREAGDVCYTDVYKDGTGVVEFLRKEDMKHAVSKLDDTKFRSHEGEVSYIRVKE 191
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D + R++EDLF+KYG I DI+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGYRLRVELAH-GGRRHS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
F +LRVE G + S + G +RRS++RV+VTGLP + SWQD
Sbjct: 66 GFGDCKLRVEYPRSSGSKFSGPAGGGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQD 125
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKDHMR AGDVCF+ V RD
Sbjct: 126 LKDHMREAGDVCFADVQRD 144
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGMT----GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ FA + G+V++ +DM+YA+R+LD +EFR + +Y+RV E
Sbjct: 129 HMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVME 183
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 83/136 (61%), Gaps = 32/136 (23%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR LP S SWQDLKD
Sbjct: 78 DYDGYRLRVEFPRSGR--------------------------------LPPSGSWQDLKD 105
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 106 HMREAGDVCYADVYRD 121
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 24/167 (14%)
Query: 97 SSGGS-RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRF 155
S GG RG + +D R+ V LP +D++D + G + + RG + + F
Sbjct: 2 SGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF 61
Query: 156 WGGEVNWGEIREAGRILGG--GMFSCLYRFRIFFIYFKCMRL-------SYFKHFRESYH 206
+ R+A + G G YR R+ F + RL H RE+
Sbjct: 62 E-------DPRDAEDAVYGRDGYDYDGYRLRVEFP--RSGRLPPSGSWQDLKDHMREAGD 112
Query: 207 NIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
+A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 113 VCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 94/140 (67%), Gaps = 16/140 (11%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR +YVGNLP D R RE+++LFYKYG I+DI +K P YAF+ FED RDAEDA+ GR
Sbjct: 5 SRRVYVGNLPRDIRERELDELFYKYGRILDIHIKGP-----YAFVTFEDERDAEDAVHGR 59
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
DG NF G RLRVEL++ GRR ++ D +S + S++RVL+ GLP +ASWQD
Sbjct: 60 DGINFAGGRLRVELSNPGRRGANPRDNFS----------GKHSEFRVLIKGLPRTASWQD 109
Query: 126 LKDHMRRA-GDVCFSQVFRD 144
+KD + DV F+ V RD
Sbjct: 110 VKDFFKDERLDVVFTDVNRD 129
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 93/143 (65%), Gaps = 18/143 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D REV+D+FYKYG + D+DLK +AF+EF RDA +A+ GRDGY
Sbjct: 17 IYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------SRRSDYRVLVTGLPSSA 121
+++GYRLRVE R + Y GG RG+ SRRSD RVLV+GLP S
Sbjct: 77 DYEGYRLRVEFPRNYR---------AIY--GGGRGLLETRGTSSRRSDNRVLVSGLPPSG 125
Query: 122 SWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AG VC++ V RD
Sbjct: 126 SWQDLKDHMREAGYVCYAAVRRD 148
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSR 253
H RE+ + +A + +G+V++ +DM YA+RKL+ ++FR + +Y+RVR ++R
Sbjct: 133 HMREAGYVCYAAVRRDGSGVVEFVWKEDMSYAVRKLNNTKFRSHKGETAYIRVRIDEAR 191
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 18/141 (12%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVGNLP D R RE++DLFYK+G I +I +K P YAF+ FED RDAEDA+R
Sbjct: 2 SRRRIYVGNLPYDIREREIDDLFYKFGRIEEITIKGP-----YAFVSFEDSRDAEDAVRR 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASW 123
RDGY F G RLRVE A+GGRR G+R + + S++R+ V+ LP +ASW
Sbjct: 57 RDGYEFGGGRLRVEFANGGRRER------------GARAFNGQHSEFRLRVSNLPRTASW 104
Query: 124 QDLKDHMRRAGDVCFSQVFRD 144
QD+KD R AG+V F++VF D
Sbjct: 105 QDVKDFCREAGEVLFAEVFHD 125
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 12/156 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +S T+++GNLPGD R +E++ LF KYG I +D+K + F++F D RDA+D
Sbjct: 1 MSRDASDTIFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD------------RYSSYSSGGSRGVSRRS 108
A+RGRDGY+FDG R+RVEL G R Y S G RRS
Sbjct: 61 AVRGRDGYDFDGKRIRVELTRGSGPRGPGGRPVRDGYDRGYDRRDDGYGRRQSHGPPRRS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+ R ++ GLP + SWQD+KDH++ AGD+C++ V R+
Sbjct: 121 ENRAIIEGLPPTGSWQDIKDHLKSAGDICYADVGRN 156
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE R + +G +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFP---RTYGGQGGWPRGGRNGPP---TRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 30 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYGRNGY 89
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 90 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 143
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 144 HMREAGDVCYADVQKD 159
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 144 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 196
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 16 IYVGNLPNDVREKDLEDLFYKYGHISEIELKNRHGLVPFAFVRFEDPRDAEDAVYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 90/136 (66%), Gaps = 9/136 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R R+++DLFYKYG I ID+K P RPP YAF+ FED RDA+DA+ RD Y
Sbjct: 5 IYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNY 64
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+FDG R+RVELA+ R R GG R R+D+R+ V+ LP SWQDLKD
Sbjct: 65 DFDGGRIRVELANETPR------RRDDRGFGGGRN---RTDFRLEVSDLPDRTSWQDLKD 115
Query: 129 HMRRAGDVCFSQVFRD 144
+ + GDV ++ V R+
Sbjct: 116 YFKPVGDVLYADVSRN 131
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 136 VCFSQVFRDRGELHWR-MLRFWGGEV-----NWGEIREAGRILGGGMFSCLYRFRIFFIY 189
V F + +H+R F GG + N R R GGG +R + +
Sbjct: 46 VAFEDPRDAKDAVHYRDNYDFDGGRIRVELANETPRRRDDRGFGGGRNRTDFRLEVSDLP 105
Query: 190 FKCMRLSYFKHFRESYHNIFAGMT----GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 245
+ +F+ ++A ++ G+V++ + +DM A RKLD S FRN F +
Sbjct: 106 DRTSWQDLKDYFKPVGDVLYADVSRNGEGVVEFATKEDMFAAKRKLDGSTFRNPFDSREI 165
Query: 246 RVR 248
RVR
Sbjct: 166 RVR 168
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 95/146 (65%), Gaps = 15/146 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK-----IPPRPPGYAFLEFEDYRDAEDAIR 63
+YVGNLP D + R++EDLF+KYG I DI+LK IP +AF+ FED RDAEDA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIP-----FAFVRFEDPRDAEDAVY 60
Query: 64 GRDGYNFDGYRLRVELAH-GGRRHSSSMDRYSSYSSGGSRGV----SRRSDYRVLVTGLP 118
GR+GY +LRVE G + S M GG +G +RRS++RV+VTGLP
Sbjct: 61 GRNGYGLGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
S SWQDLKDHMR AGDVCF+ V RD
Sbjct: 121 PSGSWQDLKDHMREAGDVCFADVQRD 146
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 200 HFRESYHNIFAGMT----GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ FA + G+V++ +DM+YA+R+LDR+EFR + + +RV
Sbjct: 131 HMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMANIRVHGEHGAS 190
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR-- 312
R S PY SR P R S PR SR SP PAR
Sbjct: 191 YGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQS--------PPRRHVSRHSP---PARRH 239
Query: 313 SASQRSPSGSPPRSF 327
+ SP PPR +
Sbjct: 240 PVTHHSP---PPRHY 251
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 92/136 (67%), Gaps = 4/136 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + R +++E+LFYKYG I DI+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 38 IYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNGY 97
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + S + G + SRRS++RVLV+GLP S SWQDLKD
Sbjct: 98 DYGQCRLRVEFP----KPSRGRGGFGGGPRGRNGPPSRRSEFRVLVSGLPPSGSWQDLKD 153
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 154 HMREAGDVCYADVQKD 169
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 154 HMREAGDVCYADVQKDGMGVVEFLRKEDMEYALRKLDDTKFRSHEGETSYIRV 206
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRTGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 130 HMREAGDVCYADVQKD 145
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 93/146 (63%), Gaps = 4/146 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D + R++EDLFYKYG I +I+LK +AF+ FED RDA+DA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFVRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ +LRVE R M G +RRS++RV+V+GLP S SWQDLKD
Sbjct: 66 GYGDSKLRVEYP---RSKPGPMGGGGGAPRGRFGPPTRRSEFRVIVSGLPPSGSWQDLKD 122
Query: 129 HMRRAGDVCFSQVFRDRGELHWRMLR 154
HMR AGDVCF+ V RD GE LR
Sbjct: 123 HMREAGDVCFADVQRD-GEGVVEFLR 147
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 200 HFRESYHNIFAGMT----GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ FA + G+V++ +DM+YA+R+LD +EFR + +Y+RV E R
Sbjct: 123 HMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDGTEFRSHQGETAYIRVYE---ER 179
Query: 255 SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 291
SPYY+R RSP + PR
Sbjct: 180 GTPNWDRSRSRSRSRGRYSPYYNR-RSPPARYQSPPR 215
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
S + +YV NLP D R +++EDLFYKYG I DI+LK +AF+ FED RDAED
Sbjct: 10 QSHDNDERIYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAED 69
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR+GY++ RLRVEL + SRRS++RVLV+GLP S
Sbjct: 70 AIYGRNGYDYGQCRLRVELPRNPGGGGPRG---------RTGPPSRRSEFRVLVSGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AG VC++ V +D
Sbjct: 121 GSWQDLKDHMREAGGVCYADVQKD 144
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++ G+V++ +DM+YA+R+LD S+FR + SY+RV Y R
Sbjct: 129 HMREAGGVCYADVQKDGMGVVEFLRKEDMEYALRRLDDSKFRSHEGETSYIRV--YPERS 186
Query: 255 SYSRSPSR--------SPYYSRSRSRSPYYSRSRSP 282
+ SPY SR SPYY+ +P
Sbjct: 187 TSYGYSRSRSGSRGRDSPYQSRG---SPYYTSPYAP 219
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 98/144 (68%), Gaps = 11/144 (7%)
Query: 11 VGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED----AIRGRD 66
VGNLP D R R+++DLFYKYG I DI++K P RPP +AF+EF++ DAED A+ D
Sbjct: 1 VGNLPLDIRERDIDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTD 60
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS--RGVSRRSDYRVLVTGLPSSASWQ 124
G F+G RLRVE++ G +++ Y SG + R + RRSDYRV+++GLP SASWQ
Sbjct: 61 GVMFEGARLRVEMSRG----TAATYGYDKRGSGKAPPRNL-RRSDYRVIISGLPKSASWQ 115
Query: 125 DLKDHMRRAGDVCFSQVFRDRGEL 148
DLKD R+AG++ ++ V R G +
Sbjct: 116 DLKDFFRQAGEIVYTDVDRQGGGI 139
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 83/136 (61%), Gaps = 34/136 (25%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE RR LP S SWQDLKD
Sbjct: 78 DYDGYRLRVEF-------------------------PRR---------LPPSGSWQDLKD 103
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V+RD
Sbjct: 104 HMREAGDVCYADVYRD 119
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 26/167 (15%)
Query: 97 SSGGS-RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRF 155
S GG RG + +D R+ V LP +D++D + G + + RG + + F
Sbjct: 2 SGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF 61
Query: 156 WGGEVNWGEIREAGRILGG--GMFSCLYRFRIFFIYFKCMRL-------SYFKHFRESYH 206
+ R+A + G G YR R+ F RL H RE+
Sbjct: 62 E-------DPRDAEDAVYGRDGYDYDGYRLRVEF----PRRLPPSGSWQDLKDHMREAGD 110
Query: 207 NIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
+A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 111 VCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 157
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGD C++ V +D
Sbjct: 130 HMREAGDACYADVQKD 145
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDACYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 5/138 (3%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGNLP D R +E++++FYK+G I ID+K P RPPG+AF+EF+D R AE+A R R+
Sbjct: 10 RAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRRN 69
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
Y F G R+RVE+A GG S Y R + +R+ V GLP SASWQDL
Sbjct: 70 NYEFAGMRMRVEIARGGEGSGSQQPLRIGY-----RPIRNTLGFRLYVKGLPRSASWQDL 124
Query: 127 KDHMRRAGDVCFSQVFRD 144
KD +RR ++++F+D
Sbjct: 125 KDFVRRVCKPLYTEIFKD 142
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 12 GNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFD 71
GNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY++
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYG 131
Query: 72 GYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR 131
RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKDHMR
Sbjct: 132 QCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMR 185
Query: 132 RAGDVCFSQVFRD 144
AGDVC++ V +D
Sbjct: 186 EAGDVCYADVQKD 198
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 183 HMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 235
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 90/137 (65%), Gaps = 6/137 (4%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
+YVGNLP D R +++EDLFYKYG I +++LK +AF+ ED RDAEDAI GR+G
Sbjct: 15 CIYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNG 74
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
Y++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLK
Sbjct: 75 YDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLK 128
Query: 128 DHMRRAGDVCFSQVFRD 144
DHMR AGDVC++ V +D
Sbjct: 129 DHMREAGDVCYADVRKD 145
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
++VGNLP D R +E++++FYK+G I ID+K P RPPG+AF+EFED R AE+A R R+
Sbjct: 36 AIFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNN 95
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
Y F G R+RVE+A GG + Y R + +R+ V LP SASWQDLK
Sbjct: 96 YEFAGMRMRVEIARGGEAAGAQQPLRIGY-----RPIRNTMGFRLYVKNLPRSASWQDLK 150
Query: 128 DHMRRAGDVCFSQVFRD 144
D +RR +++VF+D
Sbjct: 151 DFVRRVCKPLYTEVFKD 167
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S+ S +YVGNLP + R++EDLF KYGPI ID+ P +AFLEFED RDA DA
Sbjct: 7 STSSECRVYVGNLPQFVKNRDIEDLFDKYGPIKAIDIH-NRFDPAFAFLEFEDPRDASDA 65
Query: 62 IRGRDGYNFDGYRLRVEL---AHGGRRHSSSMDRYSSYSSGGSRGVS----RRSDYRVLV 114
+ G+DG F+G R+RV+ + GR + S + RRS+ RVLV
Sbjct: 66 VYGKDGERFEGQRIRVQFPRNSAAGRERTESGSNNNGGGGYVRGRGRGPPIRRSENRVLV 125
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+GLP + SWQDLKDHMR AG+V ++ V++D
Sbjct: 126 SGLPPTGSWQDLKDHMREAGEVLYADVYKD 155
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 88/142 (61%), Gaps = 14/142 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK------IPPRPPGYAFLEFEDYRDAEDAI 62
+YVGNLP D R +E+EDLF +YG I I+LK P +AF+ F+D RDAEDA+
Sbjct: 18 IYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAP----FAFISFQDPRDAEDAV 73
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
R+GY F RLRVE R S G + SRRS+YRV+V+GLP S S
Sbjct: 74 FARNGYEFGSCRLRVEFP----RSFRGSGGGYGGSRGRNGPPSRRSEYRVIVSGLPPSGS 129
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQDLKDHMR AGDVC++ V +D
Sbjct: 130 WQDLKDHMREAGDVCYADVHKD 151
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ GIV++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 136 HMREAGDVCYADVHKDGMGIVEFIRKEDMEYALRKLDDTKFRSHEGETSYIRV 188
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 91/166 (54%), Gaps = 21/166 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S LYVGNLP D REVE+ F K+G IV +LK +AF+EF DYRDA D
Sbjct: 1 MESDKVVRLYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+ +DG F+G RLRVE+ +R S D R+ Y V VTGLP +
Sbjct: 61 AIKNKDGAEFNGKRLRVEVPFSSKRQSRRSD------------PPRKGKYLVEVTGLPPT 108
Query: 121 ASWQDLKDHMRRAGDVCFSQVFR---------DRGELHWRMLRFWG 157
SWQDLKDH+R AG+ + VFR RG++ + + +F G
Sbjct: 109 GSWQDLKDHLRAAGECGHANVFRGGVGEVSFFSRGDMEYAIDKFDG 154
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 18/172 (10%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAEDAIRGR 65
++VGNLP D +RE+E++F K+G I DID+K YAF+EF RDAEDA+ R
Sbjct: 15 CIFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAEDAVESR 74
Query: 66 DGYNFDGYRLRVELAHGGRRHSSS----MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
DGYNFD YRLRVE + GR+ S + + RY+ YS+ R+++R++++ + SS
Sbjct: 75 DGYNFDKYRLRVEFS--GRKRSGNQGDKLRRYNDYSNT-------RTEHRLVISNISSSC 125
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGELHWRM---LRFWGGEVNWGEIREAGR 170
WQD+KDHM+RAG V + RG + + +++ + + E++ AGR
Sbjct: 126 RWQDIKDHMKRAGPVGHVCIKDGRGYVEYINKSDMKYALEKYDGSELQSAGR 177
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 81/136 (59%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F+G +LRVE+ R + R SRR Y V VTGLP S SWQDLKD
Sbjct: 70 DFEGNKLRVEVPFNARENGRYNARGGGRGMMHRGPKSRRGRYVVEVTGLPISGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRD 144
H+R AG+ + VF+D
Sbjct: 130 HLREAGECGHADVFKD 145
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 91/154 (59%), Gaps = 31/154 (20%)
Query: 11 VGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR-DGYN 69
VGNLP D R R+VEDLFYKYG ++P PP +AF+ FE DAEDA+RGR DG
Sbjct: 5 VGNLPLDIRTRDVEDLFYKYG-------RLPTIPPAFAFVSFEYPEDAEDAVRGRADGVM 57
Query: 70 FDGYRLRVELAHGGRRHSSSMDRYSSY--------------SSGGSRGVSR---RSDYRV 112
F+G RLRVE++ SS D Y + S G+R R RSD+R+
Sbjct: 58 FEGQRLRVEMSR------SSQDGYVEWGGSWVGKEEDGGRASQAGNRAPPRDLRRSDHRI 111
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
+++GLP SASWQDLKD R AG+V FS V R G
Sbjct: 112 IISGLPPSASWQDLKDFFRSAGEVIFSDVDRQGG 145
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 89/144 (61%), Gaps = 13/144 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK------IPPRPPGYAFLEFEDYRDAEDAI 62
+YVGNLP D R +E+EDLF +YG I ++LK P +AF+ ++D RDAEDA+
Sbjct: 18 IYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAP-----FAFISYQDPRDAEDAV 72
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSS 120
GR+GY+F RLRVE R Y R SRRS+YRV+V+GLP S
Sbjct: 73 FGRNGYDFGSCRLRVEFPRSFRGSGGGGGGGGGYGGSRGRNGPPSRRSEYRVIVSGLPPS 132
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR AGDVC++ V +D
Sbjct: 133 GSWQDLKDHMREAGDVCYADVHKD 156
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ GIV++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 141 HMREAGDVCYADVHKDGMGIVEFIRKEDMEYALRKLDDTKFRSHEGETSYIRV 193
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 105/199 (52%), Gaps = 66/199 (33%)
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
I GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDY VLVTGLP SA
Sbjct: 1 IYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYHVLVTGLPPSA 59
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLY 181
S W ++++ R G FS ++
Sbjct: 60 S---------------------------------------WQDLKDHMRKAGDVCFSEVF 80
Query: 182 RFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 241
R GM+G+VDY++YDDMKYAIRKLD +EFRNAFS
Sbjct: 81 PDR-------------------------KGMSGVVDYSNYDDMKYAIRKLDATEFRNAFS 115
Query: 242 RSYVRVREYDSRRSYSRSP 260
+Y+RVREY+S RS SRSP
Sbjct: 116 SAYIRVREYES-RSVSRSP 133
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G +LRVE+ R + R GS+ SRR Y V V+GLP S SWQDLKD
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK--SRRGRYVVEVSGLPLSGSWQDLKD 127
Query: 129 HMRRAGDVCFSQVFRD 144
H+R AG+ + VF++
Sbjct: 128 HLREAGECGHADVFKN 143
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G +LRVE+ R + R GS+ SRR Y V V+GLP S SWQDLKD
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK--SRRGRYVVEVSGLPLSGSWQDLKD 127
Query: 129 HMRRAGDVCFSQVFRD 144
H+R AG+ + VF++
Sbjct: 128 HLREAGECGHADVFKN 143
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG--GSRGVSRRSDYRVLVTGLPSSASWQDL 126
+F G +LRVE+ R + +YSS G G SRR Y V V+GLP S SWQDL
Sbjct: 70 DFGGNKLRVEVPFNARDNG----KYSSRGRGMMGRGSKSRRGRYVVEVSGLPLSGSWQDL 125
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDH+R AG+ + VF++
Sbjct: 126 KDHLREAGECGHADVFKN 143
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 14/174 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAE 59
++RS ++VGNLP R++ ++F KYG I DID+K YAF+EFE R AE
Sbjct: 8 ANRSPSCVFVGNLPEKVDDRDIHEIFDKYGEIRDIDIKHGKTSNYTSYAFIEFESVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
DA+ RDGY FD YRLRVE A G + S R SSY GSR R+DYR++++ LP
Sbjct: 68 DAVECRDGYEFDRYRLRVEFA--GEKKSRRHPR-SSYEDRGSRYPPPTRTDYRLVISNLP 124
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRG--------ELHWRMLRFWGGEVNWGE 164
WQ LKDHMR+AG V + + RG ++ + + + G E++ E
Sbjct: 125 HGCRWQHLKDHMRKAGPVGYVNIQHGRGYVDFMHKSDMKYALRKLDGTELSTSE 178
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 181 YRFRIFFIYFKCMRLSYFKHFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEF 236
YR I + C H R++ Y NI G G VD+ DMKYA+RKLD +E
Sbjct: 116 YRLVISNLPHGCRWQHLKDHMRKAGPVGYVNIQHGR-GYVDFMHKSDMKYALRKLDGTEL 174
Query: 237 RNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 270
+ + +R+++ D RRS SR R +SR R
Sbjct: 175 STSEDSARIRIKKDDYRRSRSRDAYRRRSHSRGR 208
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 88/136 (64%), Gaps = 11/136 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+G SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKD 124
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 125 HMREAGDVCYADVQKD 140
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 125 HMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 84/145 (57%), Gaps = 22/145 (15%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLP D R +EVED+F+KYG I ID+K R P +AF+EFED RDAEDA+R
Sbjct: 6 EDQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVK-SGRGPAFAFIEFEDNRDAEDAVRA 64
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT-----GLPS 119
RDGY FDG R+RVE G G RG +S + + T +
Sbjct: 65 RDGYEFDGRRIRVEFTRG----------------VGPRGPVAQSTRKEVATVEAVTIVED 108
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRD 144
+DLKDHMR AGDVC++ V RD
Sbjct: 109 VVVVKDLKDHMREAGDVCYADVARD 133
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 249
H RE+ Y ++ TG+V++T YDD+KYAIRKLD ++FR + +Y+RVRE
Sbjct: 118 HMREAGDVCYADVARDGTGVVEFTRYDDVKYAIRKLDDTKFRSHEGETAYIRVRE 172
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 90/148 (60%), Gaps = 8/148 (5%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R S + +YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA
Sbjct: 1 MSMRESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAA 60
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTG 116
DAI+ +DG +F G +LRVE+ R + +YSS G G SRR Y V V+G
Sbjct: 61 DAIKEKDGCDFGGNKLRVEVPFNARDNG----KYSSRGGRGMMGRGMKSRRGRYVVEVSG 116
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDH+R AG+ + VF++
Sbjct: 117 LPLSGSWQDLKDHLREAGECGHADVFKN 144
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 88/136 (64%), Gaps = 11/136 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+G SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKD 124
Query: 129 HMRRAGDVCFSQVFRD 144
HMR AGDVC++ V +D
Sbjct: 125 HMREAGDVCYADVQKD 140
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 125 HMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 8/148 (5%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R S + +YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA
Sbjct: 1 MSMRESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAA 60
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTG 116
DAI+ +DG +F G +LRVE+ R + +Y+S G G SRR Y V V+G
Sbjct: 61 DAIKEKDGCDFGGNKLRVEVPFNARDNG----KYNSRGGRGMMGRGMKSRRGRYVVEVSG 116
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDH+R AG+ + VF++
Sbjct: 117 LPLSGSWQDLKDHLREAGECGHADVFKN 144
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 79/135 (58%), Gaps = 12/135 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + RE+E+ F K+G I D+K +AF+EFED RDA+DAI+ +DGY
Sbjct: 10 VYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDGY 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G RLRVE+ R +S R RR Y V V GLP S SWQDLKD
Sbjct: 70 EFKGSRLRVEVPFSDRGYSR------------RRPTPRRGHYTVEVLGLPPSGSWQDLKD 117
Query: 129 HMRRAGDVCFSQVFR 143
HMR AG+ + VFR
Sbjct: 118 HMRDAGECGHADVFR 132
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 90/161 (55%), Gaps = 24/161 (14%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
T++VGNLP D R RE++DLFYKYG IV I + PP +AF+EFED RDAEDA RDG
Sbjct: 16 TIFVGNLPLDIRERELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDG 75
Query: 68 YNFDGYRLRVEL------------------------AHGGRRHSSSMDRYSSYSSGGSRG 103
Y FDG RLRVE+ GGR S+ +R GS
Sbjct: 76 YEFDGNRLRVEISKGSSGGGGFGGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFE 135
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RR+++ V+V LP ASWQDLKD RR+G V ++ F D
Sbjct: 136 RPRRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFID 176
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 83/139 (59%), Gaps = 15/139 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D RE+E+ F K+G I+ DLK +AF+EF D RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGYRLRVELA----HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
F G +LRVEL RR SS RY G +RR Y + VTGLP + SWQ
Sbjct: 69 EFHGKKLRVELPFRYRDEPRRPSSR--RY---------GTTRRGKYVLEVTGLPPTGSWQ 117
Query: 125 DLKDHMRRAGDVCFSQVFR 143
DLKDHMR AG+ + VFR
Sbjct: 118 DLKDHMRDAGECGHADVFR 136
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 98/169 (57%), Gaps = 19/169 (11%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG----YAFLEFEDYRDA 58
SR S +YVGNLPG+ EV DLF KYG I ID+K PR PG +AF+ + D RDA
Sbjct: 9 SRISSCIYVGNLPGNVVEDEVYDLFSKYGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDA 67
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
E AI RDGY +DG RLRVE + R S +Y + G G R+++R++++ LP
Sbjct: 68 EYAIDRRDGYKYDGVRLRVEYSGENR----SYGKYRNKEEGT--GPPVRTEHRIIISNLP 121
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRG--------ELHWRMLRFWGGE 159
S WQ LKD MR+ GDV ++ V R +G ++ + + +F G E
Sbjct: 122 ESCKWQHLKDVMRQCGDVGYANVERGKGVVEFISRDDMLYAIEKFDGSE 170
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 81/123 (65%), Gaps = 12/123 (9%)
Query: 25 DLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHG 82
DLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +G
Sbjct: 1 DLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYG 60
Query: 83 GRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
GR + G G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V
Sbjct: 61 GR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADV 111
Query: 142 FRD 144
+D
Sbjct: 112 QKD 114
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 99 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 151
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 61/76 (80%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R REVEDLF+KYG I +DLKI PRPP +AF+EFED RDA DA+RGRDG
Sbjct: 6 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGI 65
Query: 69 NFDGYRLRVELAHGGR 84
F G RLRVE++HG R
Sbjct: 66 EFQGQRLRVEVSHGRR 81
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGEL 148
G SRR+D+RV+VT LP S SWQDLKDHMRRAG+V FSQV RD RG L
Sbjct: 162 GPSRRTDFRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGML 208
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 19/169 (11%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG----YAFLEFEDYRDA 58
+R S +YVGNLPG+ EV DLF K+G I ID+K PR PG +AF+ + D RDA
Sbjct: 9 NRISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDA 67
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
E AI RDGY +DG RLRVE + + S +Y G G R+++R++++ LP
Sbjct: 68 EYAIDRRDGYKYDGVRLRVEYSG----ENKSYGKYRKKEEGA--GPPVRTEHRIIISNLP 121
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRG--------ELHWRMLRFWGGE 159
S WQ LKD MR+ GDV ++ + R RG ++ + + +F G E
Sbjct: 122 ESCKWQHLKDVMRQCGDVGYANIERGRGVVEFISRDDMLYAIEKFDGSE 170
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 95/166 (57%), Gaps = 15/166 (9%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLK-IPPRPPGYAFLEFEDYRDAEDA 61
S+SS +YVGNLPG+ EV DLF KYG I ID+K YAF+ + D +DA+ A
Sbjct: 8 SKSSSCIYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDADYA 67
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
I RDGY FDG+RLRVE H G + S +Y G G R++ RV+VT LP +
Sbjct: 68 IERRDGYKFDGFRLRVE--HSG--ENRSFGKYRKKDDGV--GPPIRTENRVIVTNLPDNC 121
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRG--------ELHWRMLRFWGGE 159
WQ LKD MR+ GDV ++ + R +G ++ + + +F G E
Sbjct: 122 RWQHLKDIMRQCGDVGYANIERGKGIVEFVSYDDMLYAIEKFDGAE 167
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 64/82 (78%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
R+ LY+GNLP D + +++ED+FYKYG I D+ LK+P RPP + F+ FED RDA++A+
Sbjct: 50 DRTMSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAV 109
Query: 63 RGRDGYNFDGYRLRVELAHGGR 84
R RDGY+FDGYRLRVE++ G R
Sbjct: 110 RARDGYDFDGYRLRVEMSRGKR 131
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 67/142 (47%)
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEI 165
R+++YR +VTGLP SASWQDLKDHMR+A G+VN+ ++
Sbjct: 190 RQTEYRAVVTGLPQSASWQDLKDHMRKA------------------------GDVNYADV 225
Query: 166 REAGRILGGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMK 225
G G+V + + + M
Sbjct: 226 DHKG-------------------------------------------GGVVHFNNKEGMD 242
Query: 226 YAIRKLDRSEFRNAFSRSYVRV 247
YA+RKLD SEF N + + + V
Sbjct: 243 YALRKLDGSEFSNRYDTATISV 264
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 82/138 (59%), Gaps = 20/138 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R + + GP +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKN-----RRGGPP-------------FAFVEFEDPRDAEDAVYGRDGY 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 60 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 119
Query: 127 KDHMRRAGDVCFSQVFRD 144
KDHMR AGDVC++ V+RD
Sbjct: 120 KDHMREAGDVCYADVYRD 137
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 122 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 175
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 16/175 (9%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLK--IPPRPPGYAFLEFEDYRDAE 59
++RS ++VGNLP R+++DLF K+G I DID+K YAF+EF R AE
Sbjct: 8 ANRSPSCVFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR------RSDYRVL 113
DA+ RDGY +D YRLRVE A G +R RY SY R S R+DYR++
Sbjct: 68 DAVDSRDGYEYDRYRLRVEFA-GEKRPR----RYPSYERPRDRDRSNRYPPPTRTDYRLV 122
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG---ELHWRMLRFWGGEVNWGEI 165
++ LP WQ LKDHMR+AG V + + +G LH +++ +++ E+
Sbjct: 123 ISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGKGFVDFLHKSDMKYAIRKLDGSEL 177
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 181 YRFRIFFIYFKCMRLSYFKHFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEF 236
YR I + C H R++ Y NI G G VD+ DMKYAIRKLD SE
Sbjct: 119 YRLVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHG-KGFVDFLHKSDMKYAIRKLDGSEL 177
Query: 237 RNAFSRSYVRVRE 249
+RV++
Sbjct: 178 STPDDSCRIRVKK 190
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 88/154 (57%), Gaps = 19/154 (12%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR--PPGYAFLEFEDYRDAEDAI 62
++ +YV NLP D E++D FYK+G I I +K R YA++EF+ +DAI
Sbjct: 4 TNACIYVANLPPDITEHELDDKFYKFGRIRQITIKQSRRRDDECYAYIEFDSSSSVDDAI 63
Query: 63 RGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ RDGY F YR+ V++ GG+ SRG R+DYRV+V LPSS
Sbjct: 64 KYRDGYKFGRYRIFVDILREKGGK---------------SSRGPPMRTDYRVIVDNLPSS 108
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLR 154
ASWQDLKDHMR+AG V +S V R +G + + +
Sbjct: 109 ASWQDLKDHMRKAGPVGYSSVNRGKGYVEYETKK 142
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 247
G V+Y + DM++A+ LD+SEF+N +S+S +RV
Sbjct: 134 GYVEYETKKDMEWALENLDKSEFKNIYSKSIIRV 167
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 13/153 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLK--IPPRPPGYAFLEFEDYRDAE 59
++RS ++VGNLP R++ DLF K+G I D+D+K YAF+EF R AE
Sbjct: 8 ANRSPSCVFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR------RSDYRVL 113
DA+ RDGY +D YRLRVE A G ++ RY SY R S R+DYR++
Sbjct: 68 DAVDSRDGYEYDRYRLRVEFA-GEKKPR----RYPSYDRPRDRDRSNRYPPPTRTDYRLV 122
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
++ LP WQ LKDHMR+AG V + + +G
Sbjct: 123 ISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGKG 155
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 78/135 (57%), Gaps = 17/135 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R RE+ D F +YG I + +K P RPP +AFL +E+ +DA DA+R +
Sbjct: 4 VFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNNT 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G R+RVE++ G RG + YRV ++GLP + SWQDLKD
Sbjct: 64 TFGGSRIRVEMSRG-------------IDDARPRG----TQYRVKISGLPDTMSWQDLKD 106
Query: 129 HMRRAGDVCFSQVFR 143
+R+ GDV S V R
Sbjct: 107 FLRKGGDVVHSDVDR 121
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SR +YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA D
Sbjct: 3 MSESISR-IYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAAD 61
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+ +DG ++ G +LRVE+ R + G SRR Y V V+GLP S
Sbjct: 62 AIKEKDGSDYGGNKLRVEVPFNA-RDNGKYGPRGGRGMMGRGMRSRRGRYVVEVSGLPLS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDH+R AG+ + VF++
Sbjct: 121 GSWQDLKDHLREAGECGHADVFKN 144
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP +++ED F K+G ++ DLK +AFLE+ED RDA DAI+ RDG
Sbjct: 10 VYVGNLPESCTQKDIEDEFGKFGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGS 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++G RLRVE + R + RR Y V V+GLP + SWQDLKD
Sbjct: 70 EYEGRRLRVETPFSAKDDGRPARRRGPGA-------PRRGRYIVEVSGLPPTGSWQDLKD 122
Query: 129 HMRRAGDVCFSQVFR 143
HMR AG+ + VFR
Sbjct: 123 HMREAGECAHADVFR 137
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 1 MSSRSSR----TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP--PRPPGYAFLEFED 54
M RSSR +YVGNLPG+ EV DLF KYG I ID+K+ YAF+ + D
Sbjct: 1 MGYRSSRYRTSCIYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYD 60
Query: 55 YRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
+DAE AI RDGY FDG RLRVE + + S +Y G G R+++R++V
Sbjct: 61 IKDAEYAIERRDGYKFDGERLRVEFSG----ENKSFGKYRRKEDG--IGPPLRTEHRIIV 114
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHW 150
+ LP + WQ LKD MR+ GDV ++ + +G + +
Sbjct: 115 SNLPDNCKWQHLKDIMRQCGDVGYANIEHGKGIVEF 150
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 81/138 (58%), Gaps = 20/138 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+
Sbjct: 78 DYDGYRLRVEFPRSGRGAGRGGGGGGGGGAPRGRYGPPSRRSENRVVVS----------- 126
Query: 127 KDHMRRAGDVCFSQVFRD 144
GDVC++ V+RD
Sbjct: 127 -------GDVCYADVYRD 137
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 204 SYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRN 238
Y +++ TG+V++ +DM YA+RKLD ++FR+
Sbjct: 130 CYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 164
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D RE+E+ F K+G I+ +LK +AF+EF D RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G +LRVEL R+ R S +RR Y + VTGLP S SWQDLKD
Sbjct: 69 EFHGKKLRVELPF---RYKDEPRRPSGRRY----RTTRRGKYVLEVTGLPPSGSWQDLKD 121
Query: 129 HMRRAGDVCFSQVFR 143
HMR AG+ + VFR
Sbjct: 122 HMRDAGECGHADVFR 136
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQV 141
ASWQDLKDHMRRAGDV ++ +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI 162
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 247
Y NI G+ G+V+Y++ DDM YA+RKL S FRN F + +RV
Sbjct: 159 YANIEGGV-GVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV 200
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQV 141
ASWQDLKDHMRRAGDV ++ +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI 162
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 247
Y NI G+ G+V+Y++ DDM YA+RKL S FRN F + +RV
Sbjct: 159 YANIEGGV-GVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV 200
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQV 141
ASWQDLKDHMRRAGDV ++ +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI 162
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 264
Y NI G+ G+V+Y++ DDM YA+RKL S FRN F + +RV E D Y S R P
Sbjct: 159 YANIEGGV-GVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV-ERDLGDDYVPS-RRRP 215
Query: 265 YYSRSRSRS 273
R R R
Sbjct: 216 SLGRERDRQ 224
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M LYVGN+P D ++ DLF YG ++ +D+K + +AF+ + D+RDA+D
Sbjct: 1 MPQEDEAKLYVGNIPEDATKEDIYDLFETYGRVLYVDIK-NGKISRFAFVAYRDFRDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHG------GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
A+ D +++ G LRVE + G G + SS++ + + G G RRSD+RV V
Sbjct: 60 AVNYLDKFDYHGRSLRVEHSTGVGPRGWGGQPLSSINGDNFRIARGPGGPQRRSDFRVFV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
G+P + SWQDLKDH R AG++CF+ + ++
Sbjct: 120 EGIPQTGSWQDLKDHFRPAGEICFAMISHNK 150
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 109/226 (48%), Gaps = 54/226 (23%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L D R R++E F YG I DI LK G+ F++ DYRDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
G R+ VELA G RR DR G R G R++Y++LV L +S SWQDL
Sbjct: 60 RLMGERVTVELARGMRRGPPDYDR-------GPRRFGPPTRTNYQLLVENLSTSVSWQDL 112
Query: 127 KDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLYRFRIF 186
KD MR+AGDV ++ V+W ++++ R G ++ ++ R
Sbjct: 113 KDFMRQAGDVTYTXNL--------------STSVSWQDLKDFMRQAGDVTYTDAHKLR-- 156
Query: 187 FIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLD 232
+H G+V++ SY DMK A+R LD
Sbjct: 157 ------------RH------------QGVVEFASYSDMKNALRSLD 178
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQV 141
ASWQDLKDHMRRAGDV ++ +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI 162
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 205 YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRS 259
Y NI G+ G+V+Y++ DDM YA+RKL S FRN F + +RV E D+ R R
Sbjct: 159 YANIEGGV-GVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV-ERDTERGKPRE 211
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 10/149 (6%)
Query: 2 SSRSSRT--LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP--PRPPGYAFLEFEDYRD 57
SSR +RT +YVGNLPG+ EV DLF K+G I ID+K+ YAF+ + D +D
Sbjct: 5 SSRYNRTSCIYVGNLPGNVLEDEVYDLFGKFGRIKYIDIKLTRGSSSTAYAFVHYYDIKD 64
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
AE AI RDGY FDG RLRVE + + S +Y G G R+++R++V+ L
Sbjct: 65 AEYAIERRDGYKFDGERLRVEFSG----ENKSFGKYRRKEDGI--GPPLRTEHRIIVSNL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
P + WQ LKD MR+ GDV ++ + +G
Sbjct: 119 PDNCKWQHLKDIMRQCGDVGYANIEHGKG 147
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+L+ AF++F DY+ A++AI GRDG
Sbjct: 23 IFVANLPLDVTENELEDLFYKFGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEGRDG 82
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------GVSRRSDYRVLVTGLPSS 120
+R+R+E + R R G G RRS++RV V GLP +
Sbjct: 83 TRLGFHRIRIERSRQRLRRPGEFGRSDRSGYGREGGGSGPAYGPPRRSEFRVRVYGLPPT 142
Query: 121 ASWQDLKDHMRRAGDVCFSQV 141
ASWQDLKDHMRRAGDV ++ +
Sbjct: 143 ASWQDLKDHMRRAGDVGYANI 163
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 181 YRFRIFFIYFKCMRLSYFKHFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEF 236
+R R++ + H R + Y NI G+ G+V+Y++ DM YA+RKL S F
Sbjct: 132 FRVRVYGLPPTASWQDLKDHMRRAGDVGYANIDGGV-GVVEYSNGSDMDYALRKLHGSVF 190
Query: 237 RNAFSRSYVRVREYDSRRSYS 257
RN F + +RV E DS YS
Sbjct: 191 RNIFHTAKIRV-ERDSAGDYS 210
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 9/135 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP + E+E F ++G IV++ LK P RPP +AF+E+ED RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +RVE++ G + +S +++ G + +RV ++ +P S SWQDLKD
Sbjct: 87 ELHGAEIRVEISRNGPK-ASRDEKFGGRHHG--------TQFRVELSNIPRSVSWQDLKD 137
Query: 129 HMRRAGDVCFSQVFR 143
+R G V + V R
Sbjct: 138 FLRIGGVVVHADVDR 152
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Query: 39 KIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS 98
K+ P+ D RDAEDA+ RDGY++DGYRLRVE GG ++ + S
Sbjct: 54 KLEPKSKAPIISLQNDSRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDS 113
Query: 99 G-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
G G RG +RRS YRVLV+GLP + SWQDLKDHMR AGDVCF+ V++D
Sbjct: 114 GRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVYKD 170
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA + TG+V++ +DDMKYA++KLD S FR+ +Y+RVRE
Sbjct: 155 HMREAGDVCFADVYKDGTGVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVRE 209
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 9/135 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP + E+E F ++G IV++ LK P RPP +AF+E+ED RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +RVE++ G + +S +++ G + +RV ++ +P S SWQDLKD
Sbjct: 87 ELHGAEIRVEISRNGPK-ASRDEKFGGRHHG--------TQFRVELSNIPRSVSWQDLKD 137
Query: 129 HMRRAGDVCFSQVFR 143
+R G V + V R
Sbjct: 138 FLRIGGVVVHADVDR 152
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 16/135 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R R++ D F ++G I + +K P RPP +AF+ +++ DA DA+R G
Sbjct: 4 VFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHGA 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G RLRVE++ G RG + YRV ++GLP++ SWQDLKD
Sbjct: 64 MLSGCRLRVEMSRG------------LVDDARPRG----TQYRVKISGLPATMSWQDLKD 107
Query: 129 HMRRAGDVCFSQVFR 143
+R+ GDV S V R
Sbjct: 108 FLRKGGDVVHSDVDR 122
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D +E+E+ F K+G I+ DLK +AF+EF D RDA DAIR +DG+
Sbjct: 9 IYIGNLPSDCSQKELEEEFEKFGRILYCDLKRSYTGSSFAFIEFSDSRDARDAIRDKDGF 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS-RGVSRRSDYRVLVTGLPSSASWQDLK 127
F G +LRVEL R +SGGS R RR Y + VTGLP S SWQDLK
Sbjct: 69 EFHGKKLRVELPF----------RERDQASGGSRRHGPRRGKYVLEVTGLPPSGSWQDLK 118
Query: 128 DHMRRAGDVCFSQVFR 143
DHMR AG + VFR
Sbjct: 119 DHMRDAGHCGHADVFR 134
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L D R R++E F YG I ++ LK GY F+EF+DYRDAEDA+ +G
Sbjct: 5 VFVGRLNYDVRERDLEKFFKGYGRIGEVLLK-----NGYGFVEFDDYRDAEDAVHDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VELA G RR + Y SS G R++Y++LV L SS SWQDLKD
Sbjct: 60 KLMGERISVELARGIRRGPGTG--YGGASSSRRYGPPSRTEYQLLVENLSSSVSWQDLKD 117
Query: 129 HMRRAGDVCFSQVFRDR 145
MR+AG+V ++ + R
Sbjct: 118 FMRQAGEVTYTDAHKLR 134
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR SS S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIR 171
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 18/145 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +Y+G L D R++E LF YG I +I+LK G+ F+EF D RDA+D
Sbjct: 1 MSTR----VYIGRLARDASKRDIERLFKNYGDIREINLKT-----GFGFVEFADERDAKD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ G +F G RL VE+A G RRH R + S RS YR++V +
Sbjct: 52 VVYDFHGKSFLGERLIVEIAKGTRRHDERRPRGNDRS---------RSHYRLIVENIAPG 102
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDR 145
+WQDLKD MR+AG+V F+ + RDR
Sbjct: 103 TNWQDLKDMMRKAGEVTFADISRDR 127
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
DA+DA+R R+GYNFDGY+L+VE R S R S+Y G S+R++YRV+V G
Sbjct: 1 DADDAVRARNGYNFDGYKLKVERP---RSSSGFQGRPSNYIRGRPGPPSKRTEYRVIVEG 57
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 58 LPGSGSWQDLKDHMREAGDVCYADVYRD 85
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 38 LKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY---S 94
+I R +F+EF+D RDA DA+RGRDGY+FDG RLRVEL G
Sbjct: 5 CQIHTRRTILSFIEFDDPRDARDAVRGRDGYSFDGCRLRVELTRGVGPRGPGGRPLYAAE 64
Query: 95 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S RRS YRV+++GLP+S SWQDLKDHMR AGD+C+++V +D
Sbjct: 65 QMSPRRRAPPPRRSGYRVVISGLPASGSWQDLKDHMREAGDICYAEVSKD 114
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 25 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 84
Query: 69 NFDGYRLRVELAHGGRRHSSS 89
++DGYRLRVE GR S
Sbjct: 85 DYDGYRLRVEFPRSGRGTGSG 105
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 16/136 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP + ++ F K+G I I LK+P RPP +AF+E+E+ A++A+R +G
Sbjct: 4 IFVGNLPTEIDEETLQSHFSKHGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESNGI 63
Query: 69 NFDGYRLRVELAHGG---RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
G ++RVE++ G R +SS R+ + YRV V+ L S SWQD
Sbjct: 64 ELLGSKIRVEISRSGPNQTRDTSSNKRFG-------------TQYRVTVSNLSSKISWQD 110
Query: 126 LKDHMRRAGDVCFSQV 141
LKD RR GDV + V
Sbjct: 111 LKDFFRRGGDVVHTNV 126
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 26/149 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LYVG L TR R++E LF YG I +I LK G+AF+EFED RDAEDA +G
Sbjct: 9 LYVGRLSHRTRERDLERLFSPYGRIREILLK-----SGFAFVEFEDTRDAEDACYELNGK 63
Query: 69 NFDGYRLRVELAHG-----------GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G R+ VE+A G G+R MD+Y + +R+DYRV+V L
Sbjct: 64 DLLGDRIVVEMAKGTERGRGGLPMRGQRDKGWMDKYGPF---------KRTDYRVIVGNL 114
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDR 145
+ SWQDLKD MR+ G +VC++ + R
Sbjct: 115 STRVSWQDLKDMMRKVGCEVCYADAHKHR 143
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 84/148 (56%), Gaps = 16/148 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GN+ +TR R+VE F YG + +I LK GY F+EFED+RDA+DA++ DG
Sbjct: 8 LYLGNVSDETRERDVEKFFKGYGKLREIALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVS-----RRSDYRVLVTGL 117
+ +G R+RVE A GG R+ S+ R S + RR+ YR+ V L
Sbjct: 63 DMNGSRVRVEFARSPRDKRGGSRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQYRIRVENL 122
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDR 145
S ASWQDLKD+ R GD+ ++ + R
Sbjct: 123 SSRASWQDLKDYFRSCGDITYTNAHKPR 150
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L R R++E F +G I ++ LK G+ F+EF+DYRDA+DA+ +G
Sbjct: 4 VYVGHLSYRVRERDLERFFRGFGKIREVLLK-----NGFGFVEFDDYRDADDAVYELNGR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
DG R+ VELAHG R R + SG +R G R+DYRV++ L S SWQDLK
Sbjct: 59 ELDGERVVVELAHGTARRPPPP-RSAWADSGTNRYGPPTRTDYRVIIENLSSRISWQDLK 117
Query: 128 DHMRRAGDVCFSQVFRDR 145
D MR+ GDV ++ R R
Sbjct: 118 DRMRQVGDVTYADAHRHR 135
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 25/149 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+L TR R+++ F +YG I ID+++ G+AF+EFED RDAEDA+ DG
Sbjct: 5 IYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRM-----GFAFIEFEDRRDAEDAVAEMDGR 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG R+ V+ G R G + +RR+++R+ V GL S SWQDLKD
Sbjct: 60 EFDGARIVVQPGRGHR-------------PNGPKFATRRTEHRITVEGLDSHTSWQDLKD 106
Query: 129 HMRRAGDVCFSQVFRDRGELHWRMLRFWG 157
R+AG V +S VF +R R WG
Sbjct: 107 FGRQAGQVLYSDVF-------FRQGRRWG 128
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVL 113
RDAEDA+ GRDGY++DGYRLRVE GR + R SRRS+YRV+
Sbjct: 22 RDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVI 81
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 82 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD 112
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYH----NIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 97 HMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 150
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 80/139 (57%), Gaps = 14/139 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L D R R++E F YG I DI LK G+ F++ DYRDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
G R+ VELA G RR DR G R G R++Y++LV L +S SWQDL
Sbjct: 60 RLMGERVTVELARGMRRGPPDYDR-------GPRRFGPPTRTNYQLLVENLSTSVSWQDL 112
Query: 127 KDHMRRAGDVCFSQVFRDR 145
KD MR+AGDV ++ + R
Sbjct: 113 KDFMRQAGDVTYTDAHKLR 131
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAE 59
++RS ++VGNLP R++ DLF K+G I DID+K YAF++F R AE
Sbjct: 8 ANRSPSCVFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGG--RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
DA+ RDGY +D Y+LRVE A G R+H + + ++++ L
Sbjct: 68 DAVDSRDGYEYDRYKLRVEFAGEGKPRKHDDDRRDRDRHRTDYR----------LVISNL 117
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
P WQ LKDHMR+AG V + + +G
Sbjct: 118 PHGCRWQHLKDHMRKAGPVGYVNISHGKG 146
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 57/71 (80%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VEDLFYKYG I DIDLK P +AF++FED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVEL 79
++DGYRLRVE
Sbjct: 77 DYDGYRLRVEF 87
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 204 SYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
Y ++F TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 114 CYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFLSYSDMKRALEKLDGTEVNGRKIR 171
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 23/153 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+V+ F YG + DI LK G+ F+EFED+RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS-------GGSR---------GVSRRSDYRV 112
G R+ VELAHG RR R + S GG R G R++Y++
Sbjct: 60 ELLGERVSVELAHGSRRGPGG--RIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRTNYQL 117
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+V L S SWQDLKD+MR+AG+V F+ +R
Sbjct: 118 VVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNR 150
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 171
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVEL 79
++DGYRLRVE
Sbjct: 78 DYDGYRLRVEF 88
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 27/154 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+V+ F YG + DI LK G+ F+EFED+RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLKN-----GFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----------------GVSRRSDYR 111
G R+ VELAHG RR + GSR G R++Y+
Sbjct: 60 ELLGERVSVELAHGSRRGPG-----GRIVAPGSRDWRSPPGRFNAPRESRFGPPVRTNYQ 114
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L S SWQDLKD+MR+AG+V F+ +R
Sbjct: 115 LIVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNR 148
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 16/147 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GN+ DTR R+VE F YG + ++ LK GY F+EFED+RDA+DA++ DG
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPS 119
+ +G R+RVE A R +S RY S S RR+ YR+ V L +
Sbjct: 63 DMNGSRVRVEFARSPREKRNS--RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRG 146
SWQDLKD+ R G++ ++ + R
Sbjct: 121 RTSWQDLKDYFRSCGEITYTNAHKPRN 147
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
G R+ VE G RR R G R G R+DYR++V L S SWQDLK
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLK 118
Query: 128 DHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
D+MR+AG+V ++ + R G + +R + + G EVN +IR
Sbjct: 119 DYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 168
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVS 105
Y F+EF+D RDA+DA+ +G G R+ VE G RR R G R G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPP 1268
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLR 154
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G + +R + +
Sbjct: 1269 IRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEK 1328
Query: 155 FWGGEVNWGEIR 166
G EVN +IR
Sbjct: 1329 LDGTEVNGRKIR 1340
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 77/137 (56%), Gaps = 11/137 (8%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
+YV NL R K G I +I+LK +AF+ F+D RDAEDAI GR+G
Sbjct: 65 CIYVANLRQTCSRRTC-----KCGRICEIELKNRHGLVPFAFVRFKDPRDAEDAICGRNG 119
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
Y++ RLRVE + R G + +R SD+RVLV+GLP S SWQDLK
Sbjct: 120 YDYGQCRLRVEFPR------TYGGRGGCPRGGRTGAPARGSDFRVLVSGLPPSGSWQDLK 173
Query: 128 DHMRRAGDVCFSQVFRD 144
DH+ AGDVC++ V +D
Sbjct: 174 DHIPEAGDVCYADVQKD 190
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 204 SYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV---REYDSRRSYSRS 259
Y ++ G+V++ +DM YA+RKLD ++FR + SY+RV R S+SRS
Sbjct: 183 CYADVQKDGMGMVEHLRKEDMDYALRKLDDTKFRSHEGETSYIRVYPERNTSYCYSWSRS 242
Query: 260 PSR---SPYYSRSRSRSPYYSRSRS 281
SR SPY +SR PY+S RS
Sbjct: 243 GSRDLDSPY--QSRGSPPYFSPFRS 265
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
G R+ VE G RR R G R G R+DYR++V L S SWQDLK
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLK 118
Query: 128 DHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVNWGEIR 166
D+MR+AG+V ++ FR ++ + + G EVN +IR
Sbjct: 119 DYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 168
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 6/97 (6%)
Query: 48 AFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR 107
AF+ FED RDAEDAI GR+GY++ RLRVE + R G + +RR
Sbjct: 1 AFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRR 54
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
SD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 55 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD 91
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDIQRFFGGYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
+ G R+ VE A G RR S Y + SG + G R+++R++V L S S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYGYGSRSGYRNQRSGRDKYGPPVRTEFRLIVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V ++ ++R G + +R M + G E+N IR
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAMEKLDGTEINGRRIR 173
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 7/139 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D +V F +G + +D K + AF+ + D R+A+DA+ +
Sbjct: 8 VYVGNLPLDVTKEQVGQFFSNWGEVTYVDFK-QTKTGRCAFVGYYDRREAQDAVMMMNSA 66
Query: 69 NFDGYRLRVELAHG----GRRHS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
F G RLRVE +G GR SSM+ + +G+ RR+D+RV V G+P + S
Sbjct: 67 VFHGRRLRVEFPNGLGPRGRNGQPMSSMNSNARIRRPPGQGIQRRTDFRVQVRGIPETGS 126
Query: 123 WQDLKDHMRRAGDVCFSQV 141
WQD+KDH+R AG+V F+ +
Sbjct: 127 WQDIKDHVRAAGEVVFADI 145
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 20/170 (11%)
Query: 12 GNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFD 71
G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G +
Sbjct: 1 GRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLC 55
Query: 72 GYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
G R+ VE A G RR S S Y SG + G R++YR++V L S SWQDLK
Sbjct: 56 GERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLK 115
Query: 128 DHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
D+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 116 DYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 165
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRR----HSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSAS 122
+ G R+ VE A G RR +S RYSS + G G R++YR++V L S S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRRYSSRRATGRDKYGPPVRTEYRLIVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 173
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 12/146 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D RE++D F +YG + +I + PPG+AF++FED RDA+DAIR DG
Sbjct: 5 VYVGGLPRDATSREIQDGFNRYGHVSNI--WVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG----------SRGVSRRSDYRVLVTGLP 118
+F G R+RVELA GG R R G R +R+DYRV VT LP
Sbjct: 63 DFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDRGRNPPQRTDYRVRVTDLP 122
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRD 144
W+++KD +R G+V + + D
Sbjct: 123 RDVDWRNVKDFLRTGGEVTYCNIEAD 148
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LYVG + D R R+VE LF KYG D+ LK G+ F+EF+D RDA+DA+R G
Sbjct: 4 LYVGRVSADARERDVEHLFGKYGRTRDVTLK-----NGFGFVEFDDVRDADDAMRDLHGR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G RL VE A+ G R R ++ R+ YRVLV L + SWQDLKD
Sbjct: 59 DFMGDRLIVERANSGGRRDRGEPRERRFAP------PTRTQYRVLVENLSTRISWQDLKD 112
Query: 129 HMRRAG-DVCFSQVFRDRG-----------ELHWRMLRFWGGEVNWGEIR 166
+R G +V F+ R+R ++ + R G ++N +IR
Sbjct: 113 FVRTCGVEVTFADAHRERDGTGVVEFANSTDMRHAIRRLDGKDLNGRDIR 162
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 106
+AF+ FE RDAEDAI GR+GY++ RLRVE + +R
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNGPP------TR 60
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 61 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD 98
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI-PPRPPGYAFLEFEDYRDAE 59
MSS S T+YVGNLP D R +EVEDLF+KYG I ++++K +AF++F+ +RDA+
Sbjct: 1 MSSSSESTIYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAK 60
Query: 60 DAIRGRDGYNFDGYRLRVEL 79
+A+R RDGY+FDG RLRVE
Sbjct: 61 EAVRSRDGYDFDGKRLRVEF 80
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 98 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHW 150
SG G RRSDYR++V GLP S SWQD+KDH+R AGD+C++ V RG + +
Sbjct: 147 SGRQGGPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANVENGRGIVEF 199
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 200 HFRESYHNIFAGMT---GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRS 255
H RE+ +A + GIV++T +DM AIRK D ++ + + +Y+RV+E D+R S
Sbjct: 178 HLREAGDICYANVENGRGIVEFTRAEDMHKAIRKFDDTKLKSHKGETAYIRVKE-DTRSS 236
Query: 256 YSRSPSRSPYYSRSRSRSPYY 276
SRSP SR RSRS Y
Sbjct: 237 RSRSPK----TSRRRSRSNTY 253
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 18/145 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F +G I DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS-----SGGSR-----GVSRRSDYRVLVTGLP 118
G R+ VE A G R S DRY SGG R G R++YR++V +
Sbjct: 61 ELLGERVVVEPARGIDR---SADRYRRGDRHYERSGGGRSRYEYGPPTRTEYRLIVENVS 117
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD+MR+AG+V ++ +
Sbjct: 118 SRISWQDLKDYMRQAGEVTYADAHK 142
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------GVSRRSDYRVLVTGLPSSAS 122
G R+ VE G RR R G R G R+DYR++V L S S
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSKPRPGGYGRWGRDRYGPPIRTDYRLIVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
WQDLKD+MR+AG+V ++ + R G + +R + + G EVN +IR
Sbjct: 119 WQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 173
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 25/178 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYVGKLSYHVREKDIQRFFSGYGKLLEIDLK-----NGYGFVEFEDMRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRY-------SSYSSGGSR--GVSRRSDYRVLVTGLPS 119
G R+ +E A G RR + SS++ G G R+++R++V L S
Sbjct: 59 ELCGERVVIEHARGPRRDGYGYGGHQGDGGGYSSWNRTGRDKYGPPVRTEHRLIVENLSS 118
Query: 120 SASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVNWGEIR 166
SWQDLKD MR+AG+V ++ FR R ++ + + G ++N +IR
Sbjct: 119 RCSWQDLKDFMRQAGEVTYADAHKGRANEGVIEFRSRSDMKRALEKLDGTDINGRKIR 176
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 91.7 bits (226), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 71/144 (49%), Gaps = 38/144 (26%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S +YV LP D R +++ED FYKY I +I+LK +AF+ FED RDAEDAI
Sbjct: 2 SEGDGCIYVVGLPTDVREKDLEDFFYKYDRIHEIELKNWHGLVPFAFVHFEDPRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
GR+GY++ RLRVE +GGR
Sbjct: 62 YGRNGYDYGQCRLRVEFPRTYGGR------------------------------------ 85
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKDHMR DVC++ V +D
Sbjct: 86 GSWQDLKDHMRAVWDVCYAHVQKD 109
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + ++VE+ F ++G I DI L G+ F+E+ED DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + +S S + RR+ YR+ ++GLP
Sbjct: 56 RDVVPAYHGTDFKGSRLTVQFARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD---RGELHWRMLRFWGGEVNWGEIREAGRILGG 174
+ SWQDLKD R++G DV +S+ RD RG + + G ++ + GR G
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSETLRDHEGRGFVEFET----GADLKTAIEKLDGREFKG 166
Query: 175 GMFSC 179
+C
Sbjct: 167 SRVTC 171
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 28/181 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH-------SSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTG 116
G R+ VE A G RR R + YSS G + R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGYWGGGRSNGYSSRSRSGRDKYGPPVRTEYRLIVEN 118
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEI 165
L S SWQDLKD MR+AG+V ++ ++R G + +R + + G ++N +I
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRTYSDMKRALDKLDGTDINGRKI 178
Query: 166 R 166
R
Sbjct: 179 R 179
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 38/186 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYVGRLGYHVREKDIQRFFGSYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDR----YSSYSSGGSRGVSR-------------RSDYR 111
+ G R+ VE A G RR DR Y S S GS G R R+++R
Sbjct: 59 DLCGERVIVEHARGPRR-----DRDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTEFR 113
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEV 160
++V L S SWQDLKD MR+AG+V ++ ++R +L + + G E+
Sbjct: 114 LVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERPNEGVIEFRSYSDLKRAVEKLDGTEI 173
Query: 161 NWGEIR 166
N IR
Sbjct: 174 NGRRIR 179
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 49 FLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSR 106
F + ED RDA DA+ GRDGY+FDG R+RVEL G S R
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRRGPPPR 60
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
RS YRV+V+GLP + SWQDLKDHMR AG++C++ VFRD
Sbjct: 61 RSGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD 98
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP D REVE L ++G I D+ G+AF+E+ D RDA D +R DG
Sbjct: 8 VYIGRLPRDITEREVERLAREFGRIRDVRCL-----NGFAFVEYSDSRDARDCVRELDGS 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+D RL V+ A G S DR +S S RR DY ++V GLP+ SWQDLKD
Sbjct: 63 RYDRERLSVQPAKSG---SDRRDRPASSSL-------RRGDYGIVVQGLPARTSWQDLKD 112
Query: 129 HMRRAGDVCFSQV 141
R+ GDV F+ +
Sbjct: 113 LFRKVGDVIFTNI 125
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 21/182 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V NLP D R E++D F +YG ++D+ LK+ P Y F+EFE+ AE+A++G++G
Sbjct: 5 VFVANLPKDVRESELKDEFSRYGTVIDVTLKLTGHTP-YGFVEFEEESAAEEAVKGKNGS 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G LRVE+A+G DR S Y G ++YRV VT LP SWQDLKD
Sbjct: 64 VLGGLSLRVEVANG---RGPKGDRGSKY------GPPVHTNYRVEVTHLPYHCSWQDLKD 114
Query: 129 HMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLYRFRIFFI 188
HMR+ GDV + V G + + N+ ++ A + L CL R +I
Sbjct: 115 HMRKEGDVGYCSVDGGVGIVEY---------TNYDDMMRAIKYLDDSK--CLSRGESSYI 163
Query: 189 YF 190
+
Sbjct: 164 HV 165
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LPG+ ++VE F K+G IV ++ K GY FLE+ D RDA DAI G
Sbjct: 17 IYIGSLPGEYTEKDVEREFEKFGKIVKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGYR----LRVE--LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
G+R LRVE LA GR S D +G RR + + V GLP S S
Sbjct: 77 PPPGFRDAAPLRVEIPLARSGRTDGFSDDAMPRGLAG------RRGRFVLEVRGLPPSGS 130
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQDLKDH R GDV F++V +D
Sbjct: 131 WQDLKDHFRGIGDVGFAEVRKD 152
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 29/182 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH------SSSMDR-----YSSYSSGGSR--GVSRRSDYRVLVT 115
G R+ VE A G RR SS D+ YSS + G G R+++R++V
Sbjct: 59 ELCGERVIVEHARGPRRDRGDWVVVSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVE 118
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGE 164
L S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N
Sbjct: 119 NLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRN 178
Query: 165 IR 166
IR
Sbjct: 179 IR 180
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 22/185 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + ++VE+ F ++ G I DI L G+ F+E+ED DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + +S S + RR+ YR+ ++GLP
Sbjct: 56 RDVV--PDGTDFKGSRLTVQFARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD---RGELHWRMLRFWGGEVNWGEIREAGRILGG 174
+ SWQDLKD R++G DV +S+ RD RG + + G ++ + GR G
Sbjct: 110 ET-SWQDLKDFARQSGLDVVYSETLRDHEGRGFVEFET----GADLKTAIEKLDGREFKG 164
Query: 175 GMFSC 179
+C
Sbjct: 165 SRVTC 169
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 83/155 (53%), Gaps = 24/155 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-------------SSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ DRY + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTAR-GSNRDRYDDRYGNRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 154
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 17 DTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLR 76
D + R++ED+FYKYG I ID+K P +AF+EF+D RDA DA+ GRDGY+FDG R+R
Sbjct: 31 DVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRIR 89
Query: 77 VELAHGGRRHSSSMDRY--SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
VEL G S RRS YRV+V+GLP + SWQDLK
Sbjct: 90 VELTRGVGPRGPGGRPLYGPDPRSPRRGPPPRRSGYRVIVSGLPDTGSWQDLK 142
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS+ +Y+G +P D +++E F YG I DI + G+ F+EFE+ +DAED +
Sbjct: 2 SSKRIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMN-----GFGFVEFENPKDAEDVVAN 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
G N G + +ELA RR R + G R +RR YRVL+ G+ SWQ
Sbjct: 57 FQGKNLLGEPIIIELAKESRRE-----RGGGFEERGPRPFTRRPGYRVLIHGVSRDTSWQ 111
Query: 125 DLKDHMRRAGDVCFSQVFRD 144
DLKD R AG V FS + R+
Sbjct: 112 DLKDFGREAGAVTFSDLDRE 131
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +++GNLP R R++E F +YG + +I +K Y F EF+DYRDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------------R 107
A+ +G + R+ VE A GGRR S G R R
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKYGPPTR 116
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++YRV+V L + SWQDLKD MRRAG+V F+ D+
Sbjct: 117 TNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDK 154
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 85/163 (52%), Gaps = 22/163 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGTRERDLEKFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS---------SMDRYSSYSSGGSRGVSR-----RSDYRVLV 114
G R+ VE A G R S + SR SR R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGGSHRDRYDDRYGRRGRYDRYNNSSRSNSRYGPPLRTEYRLIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVF---RDRGELHWRMLR 154
L S SWQDLKD+MR+AG+V ++ R+ G + + L+
Sbjct: 121 ENLSSRVSWQDLKDYMRQAGEVTYADAHKQNRNEGVVEFATLK 163
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N +IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINXQDIR 177
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 23/176 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYVGKLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSA 121
+ G R+ VE G RR + S+ G G R+DYR++V L S
Sbjct: 59 DLCGKRVIVEHTIGQRRDGGNRSGRSNRYGRGGGGGGGDRYGPPTRTDYRLIVENLSSRC 118
Query: 122 SWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVNWGEIR 166
SWQDLKD+MR+AG+V ++ FR ++ + + G EVN +IR
Sbjct: 119 SWQDLKDYMRQAGEVTYADTNKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 174
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 17/148 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L D R R++E F +G I +I +K G+ F+EF+D RDA+D
Sbjct: 1 MTSR----VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVT 115
A+ +G + G R+ VELA G RR + D Y S S+ S G R++Y++ V
Sbjct: 52 AVYELNGKDLMGDRVSVELARGIRRGA---DYYRSRSTAPSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFR 143
L S SWQDLKD+MR+AG+V ++ +
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHK 136
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
R+ +E A R R+S YS GS G R+++R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDL 120
Query: 127 KDHMRRAGDVCFSQVFRD 144
KD MR+AG+V + R+
Sbjct: 121 KDVMRKAGEVTYVDAHRN 138
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 21/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASW 123
G R+ VE A G RR S YSS G + R++YR++V L S SW
Sbjct: 59 ELCGERVIVEHARGPRRDRDFYGGGSGYSSRSRTGRDKYGPPVRTEYRLVVENLSSRCSW 118
Query: 124 QDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
QDLKD MR+AG+V ++ ++R G + +R + + G ++N +IR
Sbjct: 119 QDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRALDKLDGTDINGRKIR 172
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +++GNLP R R++E F +YG + +I +K Y F EF+DYRDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------------- 106
A+ +G + R+ VE A GGRR S GG R
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPP 116
Query: 107 -RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++YRV+V L + SWQDLKD MRRAG+V F+ D+
Sbjct: 117 TRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDK 156
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
R+ +E A R R+S YS GS G R+++R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDL 120
Query: 127 KDHMRRAGDVCFSQVFRD 144
KD MR+AG+V + R+
Sbjct: 121 KDVMRKAGEVTYVDAHRN 138
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
Length = 1100
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 796 MSEVSSTRLYLGNLPRNVTKKDIEEYFGSHGTGKITEIKLMN-----GFGFIEYEDAMDA 850
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + ++ S + RR+ +R+ V+GLP
Sbjct: 851 RDVVPAFHGSDFKGERLTVQFARGPRHKET----FNGPSDRPAAPRPRRTVFRMQVSGLP 906
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
+ SWQDLKD R++G DV +S+ R+R
Sbjct: 907 TETSWQDLKDFARQSGLDVVYSETTRER 934
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ S+ D+K A+ KLD E + + D + + R+P R PY SRS R
Sbjct: 938 GFVEFESHADLKTAVEKLDGRELKGSQVTCVA-----DVQPAEERAPYRDPYRSRSPPR- 991
Query: 274 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 307
R P + R YSPR Y RSP
Sbjct: 992 ----RGYPPMDDYDRRGPPRGYSPRQHYRERSPQ 1021
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 19/150 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-------------SSGGSRGVSRRSDYRVLVT 115
G R+ VE A G R S+ DRY S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTAR-GSNRDRYEDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVE 119
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQR 149
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 17/148 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L D R R++E F +G I +I +K G+ F+EF+D RDA+D
Sbjct: 1 MTSR----VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVT 115
A+ +G + G R+ VELA G RR + D Y S S+ S G R++Y++ V
Sbjct: 52 AVYELNGKDLMGDRVSVELARGIRRGA---DYYRSRSTAPSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFR 143
L S SWQDLKD+MR+AG+V ++ +
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHK 136
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + R G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDRLDGTEINGRNIR 177
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS---------------SMDRYSSYSSGGSR-GVSRRSDYRV 112
G R+ VE A G R S D+Y S S SR G R++YR+
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+V L + SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 VVENLSTRVSWQDLKDYMRQAGEVTYADAHKQR 153
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 23/155 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS-------------SMDRYSSYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 155
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP T R++E F YG + D+ +K GY F+EF+D+RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE A G R S + S G R++YR++V L S SWQDLKD
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKD 120
Query: 129 HMRRAGDVCFSQVFR 143
+MR+AG+V ++ +
Sbjct: 121 YMRQAGEVTYADAHK 135
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 24/177 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDAEDA+ +G
Sbjct: 4 VYIGRLSYHVREKDLQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDAEDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH-------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSS 120
+ G R+ VE A G RR S S S +SG + G R++YR++V L S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N +IR
Sbjct: 119 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIR 175
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 23/155 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 155
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 29/164 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDL------KIPPRPPGYAFLEFEDYRDAEDAI 62
+ V N+P R RE++D+FYK+G I I++ + R YA+++F D++DA DA
Sbjct: 4 IVVSNIPSTLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSM----------------------DRYSSYSSGG 100
+ R+GY DG + VE+ R S S+ S +
Sbjct: 64 KSRNGYEIDGQPITVEVDGDYRDDSRSIPSKGKGKGGGRYGDYGGGYGKGGSGSPSAGYD 123
Query: 101 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S G+S + YRV+VT LP ASWQDLKD MR AG+ F++V RD
Sbjct: 124 SMGMSEKY-YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRD 166
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDLQRFFGGYGKLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
+ G R+ +E A G RR S Y + +G + G R+++R++V L S S
Sbjct: 59 DLCGERVIIEHARGPRRDRDGYGYGSRSGYRNQRTGRDKYGPPVRTEFRLVVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAVEKLDGTEINGRRIR 173
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F +G I DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR----------GVSRRSDYRVLVTGLP 118
G R+ VE A G R + R Y R G R++YR++V L
Sbjct: 61 ELLGERVVVEPARGIDRSADRYRRDRYYERDRGRSRYDDYNYRYGPPTRTEYRLIVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD+MR+AG+V ++ +
Sbjct: 121 SRISWQDLKDYMRQAGEVTYADAHK 145
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 28/165 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK-----IPPRPPGYAFLEFEDYRDAEDAIR 63
+YVGNLP D + R++EDLFYKYG I +I+LK IP +AF+ FED RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFIRFEDPRDADDAVY 60
Query: 64 GRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-----SRRSDYRVLVTG 116
GR+GY + +LRVE + G + GG +RRSD+RV+V+G
Sbjct: 61 GRNGYVYGDSKLRVEYPRSTGAKFGGMGGGGGGGGGGGGGPRGRFGPPTRRSDFRVIVSG 120
Query: 117 -----------LPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHW 150
+ +S + K+ + G+ F +VF +RG +W
Sbjct: 121 GLADKGTNTRHVYNSHGGLEYKEQVEDTGETAFIRVFEERGTPNW 165
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 20/159 (12%)
Query: 23 VEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 82
VE F YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G
Sbjct: 1 VERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 55
Query: 83 GRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 138
RR S S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V +
Sbjct: 56 PRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTY 115
Query: 139 SQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
+ + R ++ + + G EVN +IR
Sbjct: 116 ADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 154
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 12/91 (13%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVL 113
DAEDAI GR+GY++ RLRVE +GGR + + G G +RRSD+RVL
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------AGWPRGARNGPPTRRSDFRVL 94
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
V+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 95 VSGLPPSGSWQDLKDHMREAGDVCYADVQKD 125
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 110 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 162
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 38 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 92
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 93 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 152
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 153 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 211
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +++GNLP R R++E F +YG + +I +K Y F EF+DYRDA+D
Sbjct: 1 MPSREGSRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------RSDYRVL 113
A+ +G +G R+ VE A GGRR + + G R R++YRV+
Sbjct: 57 AVYKLNGGELNGERITVEHARGGRRAEGRGGGFRGDRNRGRGVGGRGKYGPPTRTNYRVI 116
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
V L S SWQDLKD MRRAG+V F+ DR
Sbjct: 117 VENLSSRVSWQDLKDVMRRAGEVTFADAHNDR 148
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 22/154 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-----------------DRYSSYSSGGSRGVSRRSDYR 111
G R+ VE A G R S+ D+ + S G R++YR
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 154
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 33/169 (19%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R ++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+D
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHG-------------------GRRHSSSMDRYSSYSSGGS 101
A+ +G G R+ VE A G RR + S++R + +S
Sbjct: 52 AVYELNGKELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSADSVNRNTRTASSYK 111
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 112 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 160
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 85/163 (52%), Gaps = 34/163 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L D R ++E+ F YG I +I LK GY F+EF++ RDA+DA+ +G
Sbjct: 6 VYVGQLTSDIRENDLENFFKGYGRIREITLK-----NGYGFVEFDERRDADDAVHDLNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS-------GGSRGVSR--------------- 106
G ++RVE+AH S DR++S G RG R
Sbjct: 61 PLLGEKIRVEMAH-----RFSRDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVNP 115
Query: 107 --RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGE 147
RS YR+LV L S+ SW++LKD M +AG+VCF+ V+ R E
Sbjct: 116 PRRSRYRLLVENLSSAISWRELKDFMNQAGEVCFTDVYPQRRE 158
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 23/155 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS-------------SMDRYSSYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 155
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 23/155 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS-------------SMDRYSSYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 155
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 22/154 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-----------------DRYSSYSSGGSRGVSRRSDYR 111
G R+ VE A G R S+ D+ + S G R++YR
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 154
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP T R++E F YG + D+ +K GY F+EF+D+RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE A G R S + S G R++YR++V L S SWQDLKD
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKD 120
Query: 129 HMRRAGDVCFSQVFR 143
+MR+AG+V ++ +
Sbjct: 121 YMRQAGEVTYADAHK 135
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 33/186 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R R++E F YG IVD+ LK GY F+EF+DYRDA+DA+ +G
Sbjct: 5 IYVGRLSYSVRERDIERFFRNYGRIVDVLLK-----NGYGFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-----------------SSGGSRGVSRRSDYR 111
G R+ +E A G R Y SG G R++YR
Sbjct: 60 ELCGERVVIEHARGPNRKDDRDGGYRDRGDRGGGRGGGRQPGWMDKSGSRYGPPARTEYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEV 160
++V L S SWQDLKD+MR+AG+V ++ F R ++ + + E+
Sbjct: 120 LVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHKNEGIVEFSSRADMKTALEKLDDTEI 179
Query: 161 NWGEIR 166
N IR
Sbjct: 180 NGRRIR 185
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 38/168 (22%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP------RPPGYAFLEFEDYRDAEDAI 62
+ V N+P + R RE++D+FYK+G I I+++ R YA+++F D++DA DA
Sbjct: 4 IVVSNIPSNLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG----------------------- 99
+ R+GY DG + VE+ R D Y+ G
Sbjct: 64 KSRNGYEIDGQPITVEVDSDSRD-----DSRGPYAKGKGKGGRYDDYGGGYGKGGSGSPL 118
Query: 100 ---GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
S G+S YRV+VT LP ASWQDLKD MR AG+ F++V RD
Sbjct: 119 GFYDSMGMSENY-YRVVVTNLPRGASWQDLKDRMRDAGECRFTEVTRD 165
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-SSGGSR-GVSRRSDYRVLVTGLPSSASWQDL 126
R+ +E A R R+S Y S GSR G R+++R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQRFSYYPSQSGSRYGPPIRTEHRIIVENLSSRISWQDL 120
Query: 127 KDHMRRAGDVCFSQVFRD 144
KD MR+AG+V + R+
Sbjct: 121 KDVMRKAGEVTYVDAHRN 138
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 12/144 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSS----SMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSSA 121
G R+ VE A G R S R G SR G R++YR++V L S
Sbjct: 60 ELLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSRDKYGPPTRTEYRLIVENLSSRV 119
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDR 145
SWQDLKD+MR+AG+V ++ + R
Sbjct: 120 SWQDLKDYMRQAGEVTYADAHKQR 143
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 8/139 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY--SSGGSR-GVSRRSDYRVLVTGLPSSASWQD 125
R+ +E A R R+S Y +SG SR G R+++R++V L S SWQD
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQRFSYYQSTSGSSRYGPPVRTEHRIIVENLSSRISWQD 120
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD MR+AG+V + R+
Sbjct: 121 LKDVMRKAGEVTYVDAHRN 139
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS-------------SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGSARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQR 150
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S+ R LY+G LP DT +V+ F YG +VD + G+ F+E+E +DAEDA
Sbjct: 4 SATMGRRLYLGKLPPDTAPEDVKKTFGAYGTVVDCRVMT-----GFGFIEYESSKDAEDA 58
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR--SDYRVLVTGLPS 119
+ +G F+G + VE A R +R Y G RR +RVLVTG+
Sbjct: 59 VNEMNGKTFNGNSIAVEFARENRPRREPYERDREY------GAPRRRPGGFRVLVTGVSR 112
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRD 144
SWQDLKD R AG V F+ + RD
Sbjct: 113 DTSWQDLKDFGREAGSVTFADIDRD 137
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS------------SYSSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQR 149
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS-------------SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQR 150
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R+VE F YG I +I+LK G+ F+EFED+RDA+DA+ +G
Sbjct: 6 VFVGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFEDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASW 123
R+ +E G R+S Y SY G S+ G R+++R++V L S SW
Sbjct: 61 ELCNERVTIEHARARRGGRGRYSQRFSYYQSYGGGSSQYGPPLRTEHRLIVENLSSRVSW 120
Query: 124 QDLKDHMRRAGDVCFSQVFRD 144
QDLKD MR+AG+V F R+
Sbjct: 121 QDLKDFMRKAGEVTFVDAHRN 141
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 13/153 (8%)
Query: 1 MSSRSS---RTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDY 55
MSSR + ++VG L + R+R++E+ F G + D+++K+ GYAF+EFED
Sbjct: 1 MSSRDNPNRNRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDK 55
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM---DRYSSYSSGGSRGVSRRSDYRV 112
RDA+DA+ D F G RL VE A G R DR + + RG +++R+
Sbjct: 56 RDADDAVYELDRKEFFGSRLTVEHAKHGPRADMDKRDGDRRKGHENDRGRGRPYNTEWRL 115
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+VT L S W DLKD+ R AG+V F++ ++R
Sbjct: 116 IVTNLSSRVGWMDLKDYFRSAGEVTFTKANKER 148
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS------------SYSSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQR 149
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 79/155 (50%), Gaps = 23/155 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM------------------DRYSSYSSGGSRGVSRRSDY 110
G R+ VE A G R S D+ + S G R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSHRDRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 155
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS------------SYSSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQR 149
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LPG+ ++VE F K+G I+ ++ K GY FLE+ D RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGYR----LRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASW 123
G R LRVE+ SS D + + RG++ RR + + V GLP S SW
Sbjct: 77 PPPGMRGAAPLRVEIPLA---RSSRPDGFGEEAL--PRGLAGRRGRFVLEVRGLPPSGSW 131
Query: 124 QDLKDHMRRAGDVCFSQVFRD 144
QDLKDH R GDV F++V +D
Sbjct: 132 QDLKDHFRGIGDVGFAEVRKD 152
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LPG+ ++VE F K+G I+ ++ K GY FLE+ D RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGYR----LRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASW 123
G R LRVE+ SS D + + RG++ RR + + V GLP S SW
Sbjct: 77 PPPGMRGAAPLRVEIPLA---RSSRPDGFGEEAL--PRGLAGRRGRFVLEVRGLPPSGSW 131
Query: 124 QDLKDHMRRAGDVCFSQVFRD 144
QDLKDH R GDV F++V +D
Sbjct: 132 QDLKDHFRGIGDVGFAEVRKD 152
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 17/150 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L + R R++E F +G I +I +K G+ F+EF+D+RDA+D
Sbjct: 1 MTSR----VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVT 115
A+ +G G R+ VELA G RR + D Y S ++ S G R++Y++ V
Sbjct: 52 AVYELNGKELLGDRVSVELARGIRRGA---DYYRSRAASRSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ R R
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHRLR 138
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
++ RLRVE A+GGR R +RRSD+RVLV+G
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRASRNGP--------PTRRSDFRVLVSG 117
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHS-----SSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
+ RDGY++DGYRLRVE GG S S G +RRS +RVLVTG
Sbjct: 1 VHARDGYDYDGYRLRVEFPRGGGPGSYRGNRSGGSSGGDRGGGRRGPPARRSQFRVLVTG 60
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDHMR AGDVCF+ VF+D
Sbjct: 61 LPPSGSWQDLKDHMREAGDVCFADVFKD 88
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 249
H RE+ FA + TG+V++ +DMKYA++KLD S FR+ SYVRV+E
Sbjct: 73 HMREAGDVCFADVFKDGTGVVEFLRLEDMKYAVKKLDDSRFRSHEGEVSYVRVKE 127
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S+ LYVGNL ++ LF ++G I DI +K + YAF+EF +A++A
Sbjct: 2 SKRLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSL 61
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS--RGVSRRSDYRVLVTGLPSSASW 123
+ +F G +RVE G R YS+G S RG RR+DYR+ VT LP + SW
Sbjct: 62 NSTHFMGRDIRVEYTRGLR-----------YSTGDSIRRGPPRRTDYRIEVTHLPHNCSW 110
Query: 124 QDLKDHMRRAGDVCFSQV 141
QDLKD+M R G V + +
Sbjct: 111 QDLKDYMSRIGPVGYCDI 128
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R ++++ F YG + DI LK G+ F+EF+D+RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGYRLRVELAHGGRR-----------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VELA+G RR S ++ +R G +R++Y+++V
Sbjct: 60 ELLGERVSVELAYGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVEN 119
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTYADAHKIR 148
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS------------SYSSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQR 149
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G + VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGEHVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 32/185 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSS------SMDRYSSYSSG-------GSR---GVSRRSDYRV 112
G R+ VE G RR ++D+ SS SS G R G R+DYR+
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGRWGGRDRYGPPVRTDYRL 118
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVF---RDRGELHWR--------MLRFWGGEVN 161
+V L S SWQDLKD+MR+AG+V ++ R+ G + +R + + G EVN
Sbjct: 119 IVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVN 178
Query: 162 WGEIR 166
+IR
Sbjct: 179 GRKIR 183
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S ++G + G R++YR++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRD 57
M+ SS LY+GNLP + +E+ED F + G I +I L G+ F+E+ED D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG +F G RL V+ A G R + +S S S RR+ YR+ ++GL
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGL 109
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRD-RGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
P + SWQDLKD R++G DV +S+ D RG + + G ++ + GR G
Sbjct: 110 PET-SWQDLKDFARQSGLDVVYSEAGHDGRGFVEFET----GSDLKTAVEKLDGREFKGS 164
Query: 176 MFSCL 180
C
Sbjct: 165 RVLCT 169
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 21/139 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L R R+++D F ++G I DI LK G+AF+E++ DAE A+R DG
Sbjct: 7 VYVGHLSSRVRERDLDDEFSRFGKIRDISLK-----QGFAFVEYDHSEDAEYAVRKMDGV 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
N +G R+ VE A G RG S YR+ L + SWQDLKD
Sbjct: 62 NLEGMRILVEFA-------------KETPKRGPRGGS---GYRIYAENLSQNTSWQDLKD 105
Query: 129 HMRRAGDVCFSQVFRDRGE 147
R+AG V ++ VF +RGE
Sbjct: 106 FARKAGKVIYTDVFSERGE 124
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G + VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGEHVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 17/148 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L + R R++E F +G I +I +K G+ F+EF+D+RDA+D
Sbjct: 1 MTSR----VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVT 115
A+ +G G R+ VELA G RR + D Y S ++ S G R++Y++ V
Sbjct: 52 AVYELNGKELLGDRVSVELARGIRRGA---DYYRSRAASRSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFR 143
L S SWQDLKD+MR+AG+V ++ R
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHR 136
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 25/188 (13%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + G +F G RL V+ A G RR + MDR + RR+ YR++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 108
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRIL 172
GLP + SWQDLKD R AG DV +S+ R+ RG + + ++ + GR
Sbjct: 109 GLPET-SWQDLKDFARGAGLDVVYSETGREPGRGFVEFET----ANDLKTAIEKLDGRDF 163
Query: 173 GGGMFSCL 180
G SC+
Sbjct: 164 KGSRVSCV 171
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 25/188 (13%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + G +F G RL V+ A G RR + MDR + RR+ YR++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 108
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRIL 172
GLP + SWQDLKD R AG DV +S+ R+ RG + + ++ + GR
Sbjct: 109 GLPET-SWQDLKDFARGAGLDVVYSETGREPGRGFVEFET----ANDLKTAIEKLDGRDF 163
Query: 173 GGGMFSCL 180
G SC+
Sbjct: 164 KGSRVSCV 171
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S ++G + G R++YR++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 14/137 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y G LP DTR R++E F +G I +I L+ GYAF+EF+DYRDAEDAI +G
Sbjct: 5 VYAGKLPHDTRERDLERFFEGFGRIREILLR-----RGYAFVEFDDYRDAEDAIYELNGA 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE R S +R +R+ +R++V L S W++LK
Sbjct: 60 KLLGQRIVVEATKRPPRFGGSSNRPKP---------PQRTYHRLIVENLSSRIDWRELKA 110
Query: 129 HMRRAGDVCFSQVFRDR 145
+MR+AG+V F+ RDR
Sbjct: 111 YMRKAGNVTFADAHRDR 127
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 138/318 (43%), Gaps = 82/318 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSSHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ +R+L++
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDR-------PNMPRPRRTVFRMLIS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRIL 172
GLP + SWQDLKD R++G DV +S+ R+ RG + + ++ + GR
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGREPGRGFVEFET----AADLKTAVDKLDGRDF 161
Query: 173 GGGMFSCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLD 232
G SC I D S+DD A+R
Sbjct: 162 KGSRVSC-----------------------------------IADIQSHDDR--ALRDPY 184
Query: 233 RSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSP----YYSRS----RSPSR 284
RS + RSY + EYD R R SP + R RS P YY R RSP R
Sbjct: 185 RS---RSPRRSYPPMEEYDRRFPAPR--GYSPRHYRERSPVPVRREYYERDGYGRRSPPR 239
Query: 285 SWSYSPRSRSYSPRGKYS 302
PR Y PR Y
Sbjct: 240 -----PRMEDYPPRRPYD 252
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++ IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 177
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 22/154 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRR-----------------HSSSMDRYSSYSSGGSRGVSRRSDYR 111
G R+ VE A G R S +R S G R++YR
Sbjct: 60 ELLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSRDNREPDMRSHDRYGPPTRTEYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 120 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 153
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R ++++ F YG + DI LK G+ F+EF+D+RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGYRLRVELAHGGRR-----------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VELA+G RR S ++ +R G +R++Y+++V
Sbjct: 60 ELLGERVSVELAYGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVEN 119
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTYADAHKIR 148
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 15/142 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ Y
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAV-----Y 108
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASW 123
+G L E R S++R + +S + + R R++YR+ V L S SW
Sbjct: 109 ELNGKELLGESRDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSW 168
Query: 124 QDLKDHMRRAGDVCFSQVFRDR 145
QDLKD+MR+AG+V ++ + R
Sbjct: 169 QDLKDYMRQAGEVTYADAHKQR 190
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 21/184 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRD 57
M+ SS LY+GNLP + +E+ED F + G I +I L G+ F+E+ED D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG +F G RL V+ A G R + +S S S RR+ YR+ ++GL
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGL 109
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRD-RGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
P + SWQDLKD R++G DV +S+ D RG + + G ++ + GR G
Sbjct: 110 PET-SWQDLKDFARQSGLDVVYSETGHDGRGFVEFET----GSDLKTAVEKLDGREFKGS 164
Query: 176 MFSC 179
C
Sbjct: 165 RVLC 168
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRD 57
MS SS LY+GNLP + +E+ED F + G I +I L G+ F+E+ED D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG +F G RL V+ A G R + +S S RR+ YR+ ++GL
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKET----FSGPPDRSSAPRPRRTIYRMQISGL 109
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRD-RGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
P + SWQDLKD R++G DV +S+ D RG + + G ++ + GR G
Sbjct: 110 PET-SWQDLKDFARQSGLDVVYSETGHDGRGFVEFET----GSDLKTAVEKLDGREFKGS 164
Query: 176 MFSCL 180
C
Sbjct: 165 RVLCT 169
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 24/156 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG + DI LK GY F+EFEDYRDA+DA+ +G
Sbjct: 5 VYIGRLSYQVRERDVERFFKGYGRVTDILLK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGG-------------RRHSSSMDRYSSY-----SSGGSR-GVSRRSD 109
+ G R+ VE A G DRY+SY S+ SR G R+
Sbjct: 60 DLMGDRVLVEHAKGTPRGEGRSSSGGRGSDRGGGGDRYNSYAPPRRSARDSRYGPPVRTQ 119
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
YR++V L S SWQDLKD+MR+AG+V ++ + +
Sbjct: 120 YRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKSK 155
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 27/180 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH----------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGL 117
+ G R+ VE A G RR S SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEFRLIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N +IR
Sbjct: 119 SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIR 178
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G LP D R EV F YG IVD + G+ F+EFE RDAEDA++
Sbjct: 2 ARRLYLGRLPPDVRSEEVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDAEDAMQNF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G NF G + VE A + R Y + + R +RV+V+G+ SWQD
Sbjct: 57 NGKNFMGSNIVVEFAK------ETRPRRDPYDADRAVRARRPPGFRVIVSGISRDTSWQD 110
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD R AG V ++ + RD
Sbjct: 111 LKDFGREAGSVSYADIDRD 129
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 27/188 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ YR++V+
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRIL 172
GLP + SWQDLKD R AG DV +S+ R+ RG + + ++ + GR
Sbjct: 107 GLPET-SWQDLKDFARGAGLDVVYSETGREPGRGFVEFET----ANDLKTAIEKLDGRDF 161
Query: 173 GGGMFSCL 180
G SC+
Sbjct: 162 KGSRVSCV 169
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 86/179 (48%), Gaps = 26/179 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM--------DRYS--SYSSGGSRGVSRRSDYRVLVTGLP 118
R+ +E A R DRY S SS R++ R++V L
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRRPGGGRFSDRYGRGSQSSRSRNPPPVRTENRLIVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V F+ R + +L + + G E+N +I+
Sbjct: 121 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEMNGRKIK 179
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 15/149 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R DR S+ RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREHGHDRNSAPR-------PRRTPHRMQITGLP 108
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRG 146
+ SWQDLKD R++G DV +S+ R+ G
Sbjct: 109 NDTSWQDLKDFARQSGADVVYSETNRNGG 137
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 14/142 (9%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S L++G LP +VED F YG I+D L G+ FLE E+ RDA D +
Sbjct: 2 SETRLFIGRLPSQAAREDVEDFFKGYGRILDCKLMN-----GFGFLELENPRDARDIVN- 55
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASW 123
DG F G R+ VE A G RR R ++ G ++ RR+ YR++V L SW
Sbjct: 56 -DGKEFMGERIIVEPARGERR------RRDTFRDGAAKYPRPRRTGYRLIVENLAEDVSW 108
Query: 124 QDLKDHMRRAGDVCFSQVFRDR 145
QDLKD MR+AG+ F+ R++
Sbjct: 109 QDLKDVMRKAGEPTFTDAHREQ 130
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 17/148 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLKN-----GYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH-----------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VE A G RR S S +G + G R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDFYGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYRLVVEN 118
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
L S SWQDLKD MR+AG+V ++ ++
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKE 146
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 19/152 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + G +F G RL V+ A G RR + MDR + RR+ +R++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTIFRMMVS 108
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 146
GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 109 GLPET-SWQDLKDFARQSGLDVVYSETGRELG 139
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + +D+K AI KLD EF+ + ++ Y R+ R PY RSRS
Sbjct: 141 GFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----RSRS 191
Query: 274 PYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 306
P RS P + P R YSPR Y RSP
Sbjct: 192 P--RRSYPPMDEYDRRFPAPRGYSPRAHYRERSP 223
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRD 57
MS+ S T LY+GNLP + ++E F +G I ++ L G+ F+E++D D
Sbjct: 1 MSNEVSNTRLYLGNLPPNATKADIEAHFATHGTGEITEVKLMH-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-----SRRSDYRV 112
A D + DG +F G RL V+ A G R Y +GG+ RR+ +R+
Sbjct: 56 ARDVVP--DGSDFKGTRLTVQFARGPRPREPP-----GYGAGGAHHERAAPRPRRTIHRM 108
Query: 113 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 146
+TGLP+ SWQDLKD R+AG DV +S+ RD G
Sbjct: 109 TITGLPNETSWQDLKDFARQAGPDVVYSETARDSG 143
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 76/149 (51%), Gaps = 22/149 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + R R+VE LF +YG I ++ +K GY F+EF+D RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKLFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------------RSDYR 111
F G R+RVE+A R GG G R++YR
Sbjct: 62 EFQGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYR 121
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQ 140
+ V L S SWQDLKD+ R AG++ ++
Sbjct: 122 ITVQNLSSRTSWQDLKDYFRAAGEITYTN 150
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 15/147 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS---------SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G R S R Y SR G R++YR++V L
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKNSSRYGPPLRTEYRLVVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 TRVSWQDLKDYMRQAGEVTYADAHKQR 147
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 20/158 (12%)
Query: 24 EDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG 83
+D YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G
Sbjct: 15 QDNTMGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGP 69
Query: 84 RRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 139
RR S S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 70 RRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYA 129
Query: 140 QVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
+ R ++ + + G EVN +IR
Sbjct: 130 DAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 167
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+DYRDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS----------SGGSR-GVSRRSDYRVLVTGL 117
R+ +E A R +S SGGSR G R+++R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDR 145
S SWQDLKD MR+ G+V F R +
Sbjct: 121 SSRISWQDLKDLMRKVGEVTFVDAHRTK 148
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 36/169 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ Y
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAV-----Y 53
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ +G L GGR DRY G R+DYR++V L S SWQDLKD
Sbjct: 54 DLNGKELCGYGRWGGR------DRY---------GPPVRTDYRLIVENLSSRCSWQDLKD 98
Query: 129 HMRRAGDVCFSQVF---RDRGELHWR--------MLRFWGGEVNWGEIR 166
+MR+AG+V ++ R+ G + +R + + G EVN +IR
Sbjct: 99 YMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 147
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 22/154 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LP R R+V+ F +G I +I LK GY F+EF+DYRDA+DA+ +G
Sbjct: 7 IYIGHLPYGVRERDVKKFFKGFGRIKEILLK-----NGYGFIEFDDYRDADDAVYELNGR 61
Query: 69 NFDGYRLRVELAHGGRRHSS-----------------SMDRYSSYSSGGSRGVSRRSDYR 111
+G R+ VE A G R S R + G R++YR
Sbjct: 62 ELNGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYR 121
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L S SWQDLKD MR+AG+V ++ + R
Sbjct: 122 LIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQR 155
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 78/153 (50%), Gaps = 21/153 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHG------GRRHSSSMDRYSSYS---------SGGSR-GVSRRSDYRV 112
G R+ VE A G GRR SR G R++YR+
Sbjct: 61 ELLGERVVVEPARGTARGPGGRREYDRGGDRYGDRGRGGGGRYDKNSSRYGPPLRTEYRL 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 IVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 153
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 10/140 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GNL D R +EVED F ++G +++K+ G+ F++++ DA+D + G
Sbjct: 10 LYLGNLHKDARKQEVEDFFKEHGSGNVVEIKLMN---GFGFIQYDSEADAKDVVPAYHGR 66
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDL 126
+F G L V+ A G R + R+ + G R R R+ +R+ ++GL SWQDL
Sbjct: 67 DFKGQPLTVQFARGSRHNP----RHHDFPGGADRTFPRPRRTAFRMNISGLNPDTSWQDL 122
Query: 127 KDHMRRAG-DVCFSQVFRDR 145
KD R++G DV FS+V R+R
Sbjct: 123 KDFARKSGSDVVFSEVTRER 142
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ RLRVE + R G S +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVS 54
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKD 83
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDA+ GR+GY++ RLRVE + +RRSD+RVLV+
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNGPP------TRRSDFRVLVS 94
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 95 GLPPSGSWQDLKDHMREAGDVCYADVQKD 123
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 108 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 160
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP + R R+VE +G I ++ +K GY F+EF+D RDA+D + DG
Sbjct: 7 VYIGNLPENVRERDVEKFLKDHGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------RSDYRVLVTGLPS 119
+F G R+RVE+A R +++YRV+V L S
Sbjct: 62 DFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGNPPGPKTNYRVVVENLSS 121
Query: 120 SASWQDLKDHMRRAGDVCFSQ 140
SWQDLKD+ R AGD+ ++
Sbjct: 122 RTSWQDLKDYFRAAGDITYTN 142
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 25/193 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ +R++V+
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTIFRMMVS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGELHWRMLRF-WGGEVNWGEIREAGRILG 173
GLP + SWQDLKD R++G DV +S+ R EL + F ++ + GR
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGR---ELGRGFVEFETANDLKTAIEKLDGREFK 162
Query: 174 GGMFSCLYRFRIF 186
G +C+ + +
Sbjct: 163 GSRVTCIADIQTY 175
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + +D+K AI KLD EF+ + ++ Y R+ R PY RSRS
Sbjct: 139 GFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----RSRS 189
Query: 274 PYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 306
P RS P + P R YSPR Y RSP
Sbjct: 190 P--RRSYPPMDEYDRRFPAPRGYSPRAHYRERSP 221
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 54
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKD 83
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 4 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 57
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 58 GLPPSGSWQDLKDHMREAGDVCYADVQKD 86
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 71 HMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 123
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 22/154 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R++E F K G + DI +K GYAF+EF+DYRDA+DA+ +G
Sbjct: 7 VFVGGLSHRVRERDLERFFQKIGRVKDIAMK-----NGYAFVEFDDYRDADDAVYELNGR 61
Query: 69 NFDGYRLRVELAHGGRRHSS-----------------SMDRYSSYSSGGSRGVSRRSDYR 111
+G R+ VE A G R S R + G R++YR
Sbjct: 62 ELNGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYR 121
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L S SWQDLKD MR+AG+V ++ + R
Sbjct: 122 LIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQR 155
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 21/152 (13%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ +R++V+
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDR-------PNMPRPRRTIFRMMVS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 146
GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGRELG 137
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + +D+K AI KLD EF+ + ++ Y R+ R PY RSRS
Sbjct: 139 GFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----RSRS 189
Query: 274 PYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 306
P RS P + P R YSPR Y RSP
Sbjct: 190 P--RRSYPPMDEYDRRFPAPRGYSPRAHYRERSP 221
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR----GVSRRSDYRVLVTGLPSSASWQ 124
G R+ VE G RR S G R+DYR++V L S SWQ
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVF---RDRGELHWR--------MLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ R+ G + +R + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 171
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
DAEDAI GR+GY++ RLRVEL SRRS+YRVLV+G
Sbjct: 120 DAEDAIYGRNGYDYGQCRLRVELPRNPGGGGPRGRTGPP---------SRRSEYRVLVSG 170
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDHMR AG VC++ V +D
Sbjct: 171 LPPSGSWQDLKDHMREAGGVCYADVQKD 198
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR 254
H RE+ Y ++ G+V++ +DM+YA+R+LD S+FR + SY+RV Y R
Sbjct: 183 HMREAGGVCYADVQKDGMGVVEFLRKEDMEYALRRLDDSKFRSHEGETSYIRV--YPERS 240
Query: 255 SYSRSPSR--------SPYYSRSRSRSPYYSRSRSP 282
+ SPY SR SPYY+ +P
Sbjct: 241 TSYGYSRSRSGSRGRDSPYQSRG---SPYYTSPYAP 273
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 19/185 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGTGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G RR + + + + RR+ +R++++GLP
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFARGPRRKEN----FPVPTDRPNLPRPRRTIFRMIISGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
+ SWQDLKD R++G DV +S+ R+ RG + + ++ + GR G
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSETGREPGRGIVEFET----ANDLKTAVEKLDGREFKGT 166
Query: 176 MFSCL 180
+C+
Sbjct: 167 RVTCV 171
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 27/180 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F++FED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVKFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH----------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGL 117
+ G R+ VE A G RR S SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEHRLIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N +IR
Sbjct: 119 SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIR 178
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 26/158 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + R R+VE F +YG I ++ +K GY F+EF+D RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKFFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------------------R 107
F G R+RVE+A R S GS S +
Sbjct: 62 EFQGGRVRVEMARDPRDRRGRDRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGNPPGPK 121
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++YR+ V L S SWQDLKD+ R AGD+ ++ R
Sbjct: 122 TNYRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPR 159
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F+++G I + + RPPG+AF+EFED RDAEDA+R DG
Sbjct: 12 VYVGGLPNDATSQELEDAFHRFGRIRKV--WVARRPPGFAFIEFEDSRDAEDAVRALDGT 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG 103
G R RVEL+HG RR+ + GGSRG
Sbjct: 70 RICGVRARVELSHGRRRNGAP-------DYGGSRG 97
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S+ LY+GNLP + +VE+ F +G I +I L G+ F+E++D DA D +
Sbjct: 12 SNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVV 66
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
G F G RL V+ A GG R D Y+ R RR+ +R+ +TGLP S
Sbjct: 67 PAFHGSEFMGERLVVQFARGGNR---PRDGYNDAPRMAPR--PRRTVHRMTITGLPFETS 121
Query: 123 WQDLKDHMRRAG-DVCFSQVFRDR 145
WQDLKD R++G DV +S+V R+R
Sbjct: 122 WQDLKDFARQSGLDVVYSEVARER 145
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 20/173 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR----GVSRRSDYRVLVTGLPSSASWQ 124
G R+ VE G RR S G R+DYR++V L S SWQ
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVF---RDRGELHWR--------MLRFWGGEVNWGEIR 166
DLKD+MR+AG+V ++ R+ G + +R + + G EVN +IR
Sbjct: 119 DLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVNGRKIR 171
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ R +YVG +P D +VE F +YG ++D+ + G+ FLE++ RDAEDA+
Sbjct: 4 AGRRIYVGRIPPDASRTDVEKYFGRYGTLMDVRIM-----AGFGFLEYDSVRDAEDAVHD 58
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
+G +F G RL VE A R SGG RR +R+LV GL SWQ
Sbjct: 59 LNGRDFMGERLIVEFAKAPRGRD--------IHSGGHG--PRRGGFRLLVKGLSHETSWQ 108
Query: 125 DLKDHMRRAGDVCFSQVFRD 144
DLKD R+AG+V + V R+
Sbjct: 109 DLKDFARQAGNVTRADVDRN 128
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 37/169 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 222
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 38/186 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ Y
Sbjct: 6 IFIGRLSPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSM------------DRYS--SYSSGGSRGVSRRSDYR 111
DG L RV + H R DRY S +S R++ R
Sbjct: 56 ELDGKELCNERVTIEHARVRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENR 115
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEV 160
++V L S SWQDLKD MR+AG+V F+ R + +L + + G E+
Sbjct: 116 LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALDKLSGKEI 175
Query: 161 NWGEIR 166
N +I+
Sbjct: 176 NGRKIK 181
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G LP D R +VE YG I DI LK GY F+EF+D+RDAEDA+ +G
Sbjct: 4 IFLGRLPRDVRESDVEKFLRGYGKIRDISLK-----RGYGFVEFDDHRDAEDAVHDLNGR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDR--YSSYSSGGSR-----GVSRRSDYRVLVTGLPSSA 121
+ G R+ VE + G R DR +S G R++Y V+V L S
Sbjct: 59 DLIGERVVVEFSKGRRSEGGGRDRRDFSGRGGRDGGRRPIYGPPVRTNYSVIVENLSSRT 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDR 145
SWQDLKD+ R+ G V ++ + R
Sbjct: 119 SWQDLKDYFRKYGKVTYADAHKKR 142
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 14/148 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVNKQDIEEHFGSHGTGKITEIKLMQ-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
+D + G +F G RL V+ A G RR + + RR+ YR+ +TGLP
Sbjct: 56 KDVVPAFHGTDFKGERLTVQFARGPRRREP----FPGPPERSAAPRPRRTIYRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
+ SWQDLKD R++G DV +S+ RDR
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSET-RDR 137
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + +D++ A+ KLD ++F+ + ++ R R PY SRS R
Sbjct: 141 GFVEFENGNDLRTAVEKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRG 195
Query: 274 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 306
P Y P + R YSPRG Y RSP
Sbjct: 196 PPYP----PVDEYDRRGPPRGYSPRGHYRERSP 224
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSSASWQD 125
G R+ VE G RR Y G R G R+DYR++V L S SWQD
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGGGGGGYGRWGGRDRYGPPIRTDYRLIVENLSSRCSWQD 118
Query: 126 LKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
LKD+MR+AG+V ++ + R G + +R + + G EVN +IR
Sbjct: 119 LKDYMRQAGEVTYADTHKGRKNEGVIEFRLYSDMKRALEKLDGTEVNGRKIR 170
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
DAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+G
Sbjct: 132 DAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSG 185
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRD 144
LP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 186 LPPSGSWQDLKDHMREAGDVCYADVQKD 213
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 198 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 250
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIKDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 34/169 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
GY R + GR D+Y G R++YR++V L S SWQDLKD
Sbjct: 59 ELCGYSSR---SRTGR------DKY---------GPPVRTEYRLIVENLSSRCSWQDLKD 100
Query: 129 HMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
MR+AG+V ++ ++R G + +R + + G ++N +IR
Sbjct: 101 FMRQAGEVTYADAHKERANEGVIEFRSYSDMRRALEKLDGTDINGRKIR 149
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D EV ++F KY D+ LK +AF+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTR-----FAFVEFDHNRDADHALERLDGT 73
Query: 69 NFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
F G R+ VE+A G + MDR + ++ + G + Y++++ L +
Sbjct: 74 LFRGQRIVVEIARGPKTADKYLFRGGMDREPTQATWVQKYGAPEITQYKLIIRNLSTRIE 133
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQDLKD MR+AG V ++QV R+
Sbjct: 134 WQDLKDLMRKAGRVTYAQVHRN 155
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPSAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRD 57
M++ S T LY+GNLP + +VE F +G I ++ L G+ F+E++D D
Sbjct: 1 MTTEVSSTRLYLGNLPRNATKSDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG NF G RL V+ AHG R + ++ R RR+ +R+ +TGL
Sbjct: 56 AQDVVP--DGSNFMGERLTVQFAHGPRHREGG---FGNHERAAPR--PRRTPHRMQITGL 108
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRD 144
P+ SWQDLKD R++ DV +S+ RD
Sbjct: 109 PNDTSWQDLKDFARQSSLDVVYSETGRD 136
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 37/169 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 222
>gi|194376808|dbj|BAG57550.1| unnamed protein product [Homo sapiens]
Length = 125
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
++ RLRVE + R G + +RRSD+RVLV+G+
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGM 118
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGXIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 37/169 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ + R R++YR++V L S SWQDLKD+MR AG+V ++ + R
Sbjct: 174 QSLPRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQR 222
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 37/169 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 222
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-------DRYSSYSSGGSRGVSR-RSDYRVLVTGLPSS 120
R+ +E A R DR+SS G R R++ R++V L S
Sbjct: 61 ELCNERVTIEHARLRSRGGPRGLGRGRYNDRFSSRRPRGDRSAPPIRTENRLIVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
SWQDLKD MR+AG+V F+ R + +L + + G E+N +I+
Sbjct: 121 VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK 177
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRSAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 17/155 (10%)
Query: 1 MSSRSS---RTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDY 55
MSSR + ++VG L + R+R++E+ F G + D+++K+ GYAF+EFED
Sbjct: 1 MSSRDNPNRNRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDK 55
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM---DR--YSSYSSGGSRGVSRRSDY 110
RDA+DA+ D F G R+ VE A G R + DR YS G RG +++
Sbjct: 56 RDADDAVYELDRKEFFGSRITVEHATGTARGGDTRGERDRGGYSVRERG--RGRPYNTEW 113
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R++VT L S W DLKD+ R AG+V F++ ++R
Sbjct: 114 RLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKER 148
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 30/183 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++D+K GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSRRSDYRVLV 114
G R+ VE A G RR SS+ G S G R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLIV 118
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWG 163
L S SWQDLKD MR+AG+V ++ ++R G + +R + + G ++N
Sbjct: 119 ENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQGVIEFRSYSDMKRALDKLDGTDINGR 178
Query: 164 EIR 166
+IR
Sbjct: 179 KIR 181
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 27/179 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEPNA- 57
Query: 69 NFDGYRLRVELAHGGRRHS---SSMDR-----YSSYSSGGSR--GVSRRSDYRVLVTGLP 118
G R+ VE A G SS D+ YSS + G G R+++R++V L
Sbjct: 58 KLCGERVIVEHARGPXXXXXXFSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 117
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 118 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 176
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 37/169 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 222
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V F YG IVD + G+ F+EFE RDAEDA+
Sbjct: 2 SRRLYLGRLPTDARTDDVSKFFEGYGKIVDCRVMT-----GFGFVEFESSRDAEDALNHF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G L VE A S R Y R R R++V+G+ SWQD
Sbjct: 57 NGKPFMGTNLVVEFAK------ESRPRRDPYDDRAPRA-RRPPGIRIIVSGISRDTSWQD 109
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD R AG V F+ + RD
Sbjct: 110 LKDFGREAGSVSFADIERD 128
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE G RR G R+DYR++V L S SWQDLKD
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYG-GGGGGGGRDRYGPPIRTDYRLIVENLSSRCSWQDLKD 117
Query: 129 HMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
+MR+AG+V ++ + R G + +R + + G EVN +IR
Sbjct: 118 YMRQAGEVTYADTHKGRKNEGVIEFRLYSDMKRALEKLDGTEVNGRKIR 166
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
+DAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 15 QDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 68
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 69 GLPPSGSWQDLKDHMREAGDVCYADVQKD 97
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + G+L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 175
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 17/147 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM--------DRYS---SYSSGGSR-GVSRRSDYRVLVTG 116
R+ +ELA R M +R++ S S G SR G R+++R++V
Sbjct: 61 VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFR 143
L S SWQDLKD MR+AG+V + R
Sbjct: 121 LSSRVSWQDLKDFMRKAGEVTYVDAHR 147
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +Y+G LP R ++VE F +G I DI+LK G+ F+EF+DYRDAEDA+
Sbjct: 2 SRYSR-IYIGRLPYQAREKDVERFFRGFGRIRDINLK-----NGFGFVEFDDYRDAEDAV 55
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSS-----------MDRYSSYSSGGSR-GVSRRSDY 110
G G R+ VE A G R DR S S+ G R+D+
Sbjct: 56 YELHGRELLGERVIVEHARGNRDRDDYRDRRGGGRDFRQDRGRDGRSNASKYGPPLRTDF 115
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
R+LV + S SWQDLKD MR AG++ ++ + +
Sbjct: 116 RILVENVSSRVSWQDLKDFMRTAGEITYADAHKQK 150
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSR-GVSRRSDYRVLVTGLPSS 120
R+ +E A R + + G GSR G R+++R++V L S
Sbjct: 61 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFR 143
SWQDLKD MR+AG+V F R
Sbjct: 121 ISWQDLKDLMRKAGEVTFVDAHR 143
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 28/160 (17%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +Y+G LP D R ++EDLF YG + D+ + + F+EFE RDAED
Sbjct: 1 MSTR----VYIGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GSFGFVEFEHPRDAED 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSRGV------------- 104
A++ DG NF G R+ V+ A G R + Y+S GG+R
Sbjct: 52 AVKDFDGKNFMGERILVQHAKSGERRRAEPAGYASDPYDRRGGARDAPSSRYGAPPPPRR 111
Query: 105 ---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
RR +R +++ LP + SWQDLKD R G + F+ V
Sbjct: 112 EPRLRRGQFRCVISNLPPNTSWQDLKDIGREHGSISFADV 151
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R R+VE F +G I ++ LK G+ F+EF+D RDAEDAI +
Sbjct: 4 VYVGRLSYRARERDVEHFFRGFGKIREVTLK-----NGFGFVEFDDPRDAEDAIYELNNR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------GVSRRSDYRVLVTGLPSS 120
+ G R+ VE A G R DR +Y G R +++R+++ L S
Sbjct: 59 DLMGERVIVEFAKGTRYD----DRRGAYPLITPSYLLFRPRFGRPRNTEWRLVINNLSSR 114
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGE 147
A+W+D+KD+MR+AGDV F+ + GE
Sbjct: 115 ATWRDIKDYMRQAGDVTFADAHKQLGE 141
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 22/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I D+ LK G+ F+ F+D RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGYRLRVELAHG-----GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+ G R+ +E+A G G SSS ++G+ YR++V L S +W
Sbjct: 62 SLCGERVMLEIAKGTPRGPGGESSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLSSRVTW 120
Query: 124 QDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVNWGEIR 166
QDLKD+MR+ G+V ++ F R E+ + + + G E+N I+
Sbjct: 121 QDLKDYMRQCGEVVYADANRYRRNEGVVEFSSRKEMKYAIEKLNGTEINGRHIK 174
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 23 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSR-GVSRRSDYRVLVTGLPSS 120
R+ +E A R + + G GSR G R+++R++V L S
Sbjct: 78 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR 137
Query: 121 ASWQDLKDHMRRAGDVCFSQVFR 143
SWQDLKD MR+AG+V F R
Sbjct: 138 ISWQDLKDLMRKAGEVTFVDAHR 160
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 21/191 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + ++E+ F + G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG F G RL V+ A G RR + + S + RR+ +R+ ++GLP
Sbjct: 56 RDIV--PDGSEFKGERLTVQFARGPRRKEA----FPGPSERNALPRPRRTIFRMQISGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
+ SWQDLKD R++G DV +S+ R+ RG + + V + RE G
Sbjct: 110 ET-SWQDLKDFARQSGLDVVYSETGREQGRGFVEFETANDLKTAVEKLDQRE----FKGS 164
Query: 176 MFSCLYRFRIF 186
+ SC+ + F
Sbjct: 165 VVSCVADIQSF 175
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + +D+K A+ KLD+ EF+ + ++ ++ R P R PY SRS R
Sbjct: 139 GFVEFETANDLKTAVEKLDQREFKGSVVSCVADIQSFEER------PMRDPYRSRSPPRR 192
Query: 274 PYYSRSRSPSRSWSYS---PRSRSYSPRGKYSRRSP 306
PY P Y P R YSPR Y RSP
Sbjct: 193 PY------PVTMDEYDRRIPPPRGYSPREHYRERSP 222
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEPNA- 57
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY----SSGGSR-GVSRRSDYRVLVTGLPSSASW 123
G R+ VE A G R S Y +SG + G R+++R++V L S SW
Sbjct: 58 KLCGERVIVEHARGPSREGSYSSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSW 117
Query: 124 QDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWGGEVNWGEIR 166
QDLKD MR+AG+V ++ ++R G + +R + + G E+N IR
Sbjct: 118 QDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 171
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 55/189 (29%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
++++G LP R R+++D F YG IVDI +K YAF+EFED RDA DA++ D
Sbjct: 7 SVWMGGLPERVRSRDIDDFFKGYGRIVDISIKTK-----YAFVEFEDERDAADAVKDLDD 61
Query: 68 YNFDGYRLRVELAHGGRR-----HSSSMDRYSSYSSGGS--------------------- 101
+G R+R+E++ G + + RY SYS S
Sbjct: 62 QKLNGSRVRLEVSKGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGRSRSRS 121
Query: 102 --RGVSRRSDY-----------------RVLVTGLPSSASWQDLKDHMRRAGDVCF---- 138
RG RR + V V L S SWQDLKD MR+AG+V +
Sbjct: 122 PARGSDRRETFYSKPAYKKYGAPEKTRWTVEVDNLSSRCSWQDLKDFMRKAGEVTYGDAH 181
Query: 139 -SQVFRDRG 146
S + R+RG
Sbjct: 182 GSDIGRNRG 190
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP DT ++ D+F KY D+ LK +AF+EF+ +RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSDIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGYRLRVELAHGGR-----RHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
F G R+ VE+A G R R ++ ++ R G + Y++LV L +
Sbjct: 74 TFRGRRISVEVARGPRTADKYRFKGGLNHEPVQATWVKRYGTPEITKYKILVKNLSTRIE 133
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGE 159
WQDLKD M++AG V ++ ++ +H M+ F E
Sbjct: 134 WQDLKDLMKKAGTVTYALAHKN--NMHEGMVCFSNEE 168
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 31/158 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L TR R+VE F YG + +I+LK G+ F+EFED RD++DA+ +G
Sbjct: 30 VYIGRLSYQTRERDVERFFRGYGRLREINLK-----NGFGFVEFEDPRDSDDAVYELNGK 84
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSR-----------------GVSR---- 106
G R+ +E A G R R S YS+ GG R GV +
Sbjct: 85 ELCGERVTIEHARGPVRRDY---RDSGYSNRGGDRDSYRSDRGGFGPPRRRGGVDKYGPP 141
Query: 107 -RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
R+++R++V L S SWQDLKD+MR+AG+V F+ +
Sbjct: 142 TRTEHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHK 179
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 41/177 (23%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R ++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+D
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS---------------------------SMDRY 93
A+ +G G R+ VE A G R S S++R
Sbjct: 52 AVYELNGKELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRN 111
Query: 94 SSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ +S + + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 112 TRTTSSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 168
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-----YSSGGSRGVSR-----RSDYRVLVTGLP 118
R+ +E A R Y G G SR R++ R++V L
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRTWTGGRFSDRYGRGSQSGRSRNPPPVRTENRLIVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V F+ R
Sbjct: 121 SRVSWQDLKDFMRQAGEVTFADAHR 145
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 78/162 (48%), Gaps = 30/162 (18%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +YVG LP D R ++EDLF YG + D+ + + F+EFE +RDAED
Sbjct: 1 MSTR----VYVGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GTFGFVEFEHHRDAED 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-----MDRYSSYSSGGSRGVSR--------- 106
A++ DG NF G R+ V+ A R D Y GG SR
Sbjct: 52 AVKDFDGKNFMGERIVVQHAKQSERRRPEPAGYGSDPYDRRGGGGREPPSRYGSSVAPPP 111
Query: 107 -------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
R +R +V+ LP + SWQDLKD R G V F+ V
Sbjct: 112 RREPRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADV 153
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 20/180 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+ S+R +YVG L R++E F YG I DI LK G+ F+EF+D RDA+D
Sbjct: 1 MSNMSAR-VYVGRLSYRASERDIEHFFRGYGRIRDIVLK-----NGFGFVEFDDPRDADD 54
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS---SSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+ +G G R+ +E + G R DR+ G +++ YR++V L
Sbjct: 55 AVYELNGKELCGERVILEFSRRGPRSRMGFGGFDRFPPPRRESRYGPPQQTRYRLIVENL 114
Query: 118 PSSASWQDLKDHMRRAGDVCFSQ-----------VFRDRGELHWRMLRFWGGEVNWGEIR 166
S SWQDLKD MR AG+V F+ F R +L + + G EVN +++
Sbjct: 115 SSRCSWQDLKDIMRTAGEVTFADAHKQHPNEGIVCFLTRDDLERALDKLQGKEVNGRKLK 174
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + ++E+ F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G RR + + + RR+ +R+ ++GLP
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFARGPRRKEA----FQGPPDRNALPRPRRTMFRMQISGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD--RGELHWRMLRFWGGEVNWGEIREAGRILGGG 175
+ SWQDLKD R++G DV +S+ R+ RG + + V + RE G
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSETGREQGRGFVEFETASDLKTAVEKLDQRE----FKGS 166
Query: 176 MFSCLYRFRIF 186
+ SC+ + F
Sbjct: 167 VVSCVADIQNF 177
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + D+K A+ KLD+ EF+ + ++ ++ R P R PY SRS R
Sbjct: 141 GFVEFETASDLKTAVEKLDQREFKGSVVSCVADIQNFEER------PVRDPYRSRSPPRR 194
Query: 274 PYYSRSRSPSRSWSYS---PRSRSYSPRGKYSRRSP 306
PY P+ Y P R YSPR Y RSP
Sbjct: 195 PY------PATMEEYDRRIPPPRGYSPRDHYRERSP 224
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + +VE+ F +G I +I L G+ F+E++D DA
Sbjct: 1 MAEVSNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G F G RL V+ A G R ++ + RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSEFMGERLVVQFARGSNRPRDGFEQQPRQAP-----RPRRTVHRMTITGLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++G DV +S+V R+R
Sbjct: 111 FETSWQDLKDFARQSGLDVVYSEVGRER 138
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 18/151 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + ++++D F +G I +I L G+ F+E+ED DA
Sbjct: 1 MADVSSTRLYLGNLPRNITKQDIQDHFGTHGAGSIKEIKLMN-----GFGFIEYEDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTG 116
D + G F G RL V+ A G RR ++ R + RR+ YR+ +TG
Sbjct: 56 RDVVPAFHGTEFKGERLTVQFARGPRRK-------DDFNGPSDRNIPRPRRTIYRMQITG 108
Query: 117 LPSSASWQDLKDHMRRAG--DVCFSQVFRDR 145
L SWQDLKD R +G DV +S+ R+R
Sbjct: 109 LQPDTSWQDLKDFARNSGQLDVVYSETGRER 139
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V F YG I+D + G+ F+EFE+ +DAEDA+
Sbjct: 2 SRRLYLGRLPTDARSDDVSKFFDGYGRIIDCRVMT-----GFGFVEFENAKDAEDAVHNF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR---SDYRVLVTGLPSSAS 122
+G F G + VE A R Y + GG G R R++V+G+ S
Sbjct: 57 NGKPFMGVNIVVEFAKESRPRREV---YDNDRGGGGHGAPRSRRPPGIRLIVSGVSRDTS 113
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQDLKD R AG V F+ + RD
Sbjct: 114 WQDLKDFGRDAGSVSFADIDRD 135
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 75/174 (43%), Gaps = 41/174 (23%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
R LY+G LP RM +VE+ F +G I I+LK PGY F+ FED RDAE+A
Sbjct: 2 DREEAQLYIGYLPNQARMSDVEEFFKGFGHIKSINLK-----PGYGFVVFEDKRDAEEAA 56
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------------- 106
R DG G ++ VE+A G S YS G R + R
Sbjct: 57 RDLDGKRMCGEKVDVEMAKGPGNKSR-----KEYSRSGDRPIVRDTRSGFNGRRRSRSRD 111
Query: 107 -----------RSDYRVLVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDR 145
R D + +T L + SWQDLKD +R D C + + DR
Sbjct: 112 RGFSSRKKEPYRDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDR 165
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
++R LY+G LP DTR +V F YG IVD + G+ F+EFE RDAEDA+
Sbjct: 2 AARRLYLGRLPPDTRSEDVSKFFDGYGHIVDCRVMT-----GFGFVEFESTRDAEDALNH 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
+G F+G + +E A S R Y + R R R++V+G+ SWQ
Sbjct: 57 FNGKPFNGANIVIEFA------KESRPRRDVYEADRPR-ARRPPGIRLIVSGVSRDTSWQ 109
Query: 125 DLKDHMRRAGDVCFSQVFRD 144
DLKD R AG+V ++ + RD
Sbjct: 110 DLKDFGREAGNVSYADIDRD 129
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
Query: 211 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 261
GMTGIV+YT+Y+DMKYAIRKLD SEFRNAFS +Y+RVREYD RR Y+RSPS
Sbjct: 18 GMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYD-RRRYTRSPS 67
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 18/19 (94%)
Query: 130 MRRAGDVCFSQVFRDRGEL 148
MRRAGDVCFSQVFRDRG +
Sbjct: 1 MRRAGDVCFSQVFRDRGGM 19
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ LRVE + R G + +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCWLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 54
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKD 83
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ DG
Sbjct: 6 IFIGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS--------RRSDYRVLVTGLPSS 120
R+ +E A R + + RG R++ R++V L S
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVNWGEIR 166
SWQDLKD MR+AG+V F+ F +L + + G E+N +I+
Sbjct: 121 VSWQDLKDFMRQAGEVTFADAHRPNLNEGVVEFASHSDLKNALEKLSGKEINGRKIK 177
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 35 DIDLKIPPRPPG------YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL-AHGGRRHS 87
DID+K R G YAF+EFE R AEDA+ R GY + G LRVE A RR
Sbjct: 59 DIDIK---RARGGMSDSCYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPARRLG 115
Query: 88 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF-RDRG 146
S+ + GG+ G RR+ +R LV+ LP WQ LKDHMRRAG V F++V RG
Sbjct: 116 SNPN---FIPMGGASGPPRRTGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVLSHGRG 172
Query: 147 EL---HWRMLRFWGGEVNWGEIREAGR 170
+ H L++ ++ E+R GR
Sbjct: 173 VVEFEHAEDLKYAVRSLDKSEMRVEGR 199
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G LP DTR EV F +GP+VD+ + G+ F+EFE RDAEDA+R
Sbjct: 2 ARRLYLGKLPPDTRTDEVTKYFDGFGPLVDVRVMT-----GFGFVEFESSRDAEDALRDI 56
Query: 66 DGYNFDGYRLRVELA--HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
G F G + VE A + GRR+ Y S R R + R+ V + SW
Sbjct: 57 RGKPFLGSNIVVEFAKENRGRRND-----YEDRSFAPRR---RPAGIRISVDNISKDTSW 108
Query: 124 QDLKDHMRRAGDVCFSQVFRD---RGELHW 150
QDLKD R AG V F+ + R+ RG L +
Sbjct: 109 QDLKDFGREAGSVSFADIDREVPGRGILEY 138
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + +L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK 175
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
WQDLKD MR+AG+V F+ R + +L + + G E+N +I+
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK 175
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S+R +Y+G+LP + +VED+F GPI+D+ + Y F+EFE RDAEDA+R
Sbjct: 2 SNRRVYIGHLPPNVTKTDVEDVFKGLGPILDVRILG-----NYGFVEFESSRDAEDALRD 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+G + G + VE RR + RG RR R+ V G+P S SW
Sbjct: 57 YNGVSLLGENIIVEAPRERRRDAYGPGVGGYRGGDAPPRGPPRRG-VRINVVGIPGSTSW 115
Query: 124 QDLKDHMRRAGD-VCFSQVFR-----------DRGELHWRMLRFWGGEVNWGEIR 166
QDLKD+ R + V ++ V R GE M R G ++N +R
Sbjct: 116 QDLKDYGRLGSNMVTYADVDRYNPGVGVIEYPTMGEAEEAMSRLAGVDINGQPVR 170
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 86/192 (44%), Gaps = 44/192 (22%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ Y
Sbjct: 6 IFVGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSM------------------DRYS--SYSSGGSRGVS 105
DG L RV + H R DRY S S
Sbjct: 56 ELDGKELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPP 115
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLR 154
R++ R++V L S SWQDLKD MR+AG+V F+ R + +L + +
Sbjct: 116 MRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEK 175
Query: 155 FWGGEVNWGEIR 166
G E+N +I+
Sbjct: 176 LSGKEINGRKIK 187
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDAE 59
+S S+ LY+GNLP + +VE+ F +G I +I L G+ F+E++D DA
Sbjct: 15 ASVSNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDAR 69
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
D + G F G RL V+ A G R + + RR+ +R+ +TGLP
Sbjct: 70 DVVPAFHGSEFMGERLVVQFARGSTRPREGFEHQPRMAP-----RPRRTIHRMTITGLPF 124
Query: 120 SASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++G DV +S+V R+R
Sbjct: 125 ETSWQDLKDFARQSGLDVVYSEVNRER 151
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 36/189 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++D+K GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------------GVSRRS 108
G R+ VE A G RR SS+ G S G R+
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRT 118
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------MLRFWG 157
+YR++V L S SWQDLKD MR+AG+V ++ ++R G + +R + + G
Sbjct: 119 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQGVIEFRSYSDMKRALDKLDG 178
Query: 158 GEVNWGEIR 166
++N +IR
Sbjct: 179 TDINGRKIR 187
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDR-------------YSSYSSGGSR-GVSRRSDYRVLV 114
R+ +E A R M Y +SGG R G R+++R++V
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPRYGPPVRTEHRIIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
L S SWQDLKD MR+AG+V + R
Sbjct: 121 ENLSSRVSWQDLKDFMRKAGEVTYVDAHR 149
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 23/157 (14%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS +YVG L R R+VE F +G I +I+LK G+ F+EFEDYRDA+DA+
Sbjct: 2 SSGRVYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYE 56
Query: 65 RDGYNFDGYRLRVELAHGGRR------------------HSSSMDRYSSYSSGGSRGVSR 106
+G G R+ +E A G R S G
Sbjct: 57 LNGKELVGERVIIEHARGPARGRDEYRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPV 116
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
R+++R++V L S SWQDLKD+MR+AG+V F+ +
Sbjct: 117 RTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHK 153
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP DT + D+F KY D+ LK +AF+EF+ +RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSGIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGYRLRVELAHGGR-----RHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
F G R+ VE+A G R R ++ ++ R G + Y++LV L +
Sbjct: 74 TFRGRRISVEVARGPRTADKYRFKGGLNHEPVQATWVKRYGTPEITKYKILVKNLSTRIE 133
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGE 159
WQDLKD M++AG V ++ ++ +H M+ F E
Sbjct: 134 WQDLKDLMKKAGTVTYALAHKN--NMHEGMVCFSNEE 168
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D + R++EDLF+KYG I +I+LK +AF+ FED RDA+DA+ GR+GY
Sbjct: 6 IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
+ +LRVE + GG+ G +RRS++RV+VTG
Sbjct: 66 VYGNSKLRVEYPRSTGGKPTPMGPGGAGPRGRFGP--PTRRSEFRVIVTG 113
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNNGSKYELECIFSKYGPLRNV--WVARNPPGFAFIEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMD 91
DG G R RVE++ G RH S+++
Sbjct: 68 DGSRMCGTRARVEMSSGRTRHRSALE 93
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 27/175 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-----------SSGGSRGVSRRSDYRVLVTGL 117
R+ +E A R SSG G R+++R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGYRPSRSSGPRYGPPVRTEHRLIVENL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVN 161
S SWQDLKD MR+AG+V F F R ++ + +F G E+N
Sbjct: 121 SSRISWQDLKDMMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKSAISKFDGTELN 175
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 33/181 (18%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSM-------DRYSSYSSGGSR--GVSRRSDYRVLVTG 116
DG L RV + H R DR+SS R R++ R++V
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGGRYSDRFSSRRPRNDRRNAPPVRTENRLIVEN 115
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEI 165
L S SWQDLKD MR+AG+V F+ R + +L + + G E+N +I
Sbjct: 116 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 175
Query: 166 R 166
+
Sbjct: 176 K 176
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S+ LY+GNLP + +VE+ F +G I++I L G+ F+E++D DA D +
Sbjct: 7 SNTRLYLGNLPRNATKADVENHFNTHGTGEIMEIKLMN-----GFGFIEYKDAMDARDVV 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
G F G RL V+ A G R + + RR+ +R+ +TGLP S
Sbjct: 62 PAFHGSEFMGERLVVQFARGSNRPREGFEHQPRMAP-----RPRRTVHRMTITGLPFETS 116
Query: 123 WQDLKDHMRRAG-DVCFSQVFRDR 145
WQDLKD R++G DV +S+V R+R
Sbjct: 117 WQDLKDFARQSGLDVVYSEVNRER 140
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 27/153 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP + R++E F YG + ++ +K GY F+EFEDYRDA+DA+ +G
Sbjct: 5 VYIGGLPYRVKERDIERFFRGYGKLREVLIK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGR------------------RHSSSMDRYSSYSSGGSRGVSRRSDY 110
G R+ VE A G R S+ MD ++ G R+DY
Sbjct: 60 ELCGERVSVEHARGSGRRGGRDDRNDRDHRDRGSRRSNWMDN----NAPPRYGPPTRTDY 115
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
R++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 116 RLVVENLSSRVSWQDLKDYMRQAGEVTYADAHK 148
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSAS 122
R+ +E A R RYS + G RR + R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRLAVADLGNDRRKCSTCKNRNRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFR 143
WQDLKD MR+AG+V F+ R
Sbjct: 121 WQDLKDFMRQAGEVTFADAHR 141
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R H ++ + R RR+ +R+ ++GLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGAR-HREGGPGFTHERNSQPR--PRRTPHRMQISGLP 112
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
+ SWQDLKD R++G DV +S+ R++
Sbjct: 113 NETSWQDLKDFARQSGLDVVYSETTRNQ 140
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R H ++ + R RR+ +R+ ++GLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGAR-HREGGPGFTHERNSQPR--PRRTPHRMQISGLP 112
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
+ SWQDLKD R++G DV +S+ R++
Sbjct: 113 NETSWQDLKDFARQSGLDVVYSETTRNQ 140
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 25/135 (18%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+G L E R S +RY G R+D+R++V L S SWQDLKD
Sbjct: 56 ELNGKELCSE------RSLSGPNRY---------GPPVRTDHRLVVENLSSRTSWQDLKD 100
Query: 129 HMRRAGDVCFSQVFR 143
MR+AG+V F R
Sbjct: 101 LMRKAGEVTFVDAHR 115
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + D +++ R RR+ +R+ ++GLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTR----NRDTFANPERTAPR--PRRTPHRMQISGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMF 177
SWQDLKD R++ DV +S+ RDR + ++ + GR G
Sbjct: 110 GETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGARV 169
Query: 178 SC 179
+C
Sbjct: 170 TC 171
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 27/163 (16%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R ++VG L R ++E F +G I DI++K G+ F+EF+D RDA+DA+
Sbjct: 2 SGRRIFVGRLSYRAREGDIERFFKGFGRITDINIK-----NGFCFVEFDDSRDADDAVYE 56
Query: 65 RDGYNFDGYRLRVELAHGGRR-------------HSSSMDRYSSYSSGGSRGVSRR---- 107
+ G R+ VELA G +R + RG RR
Sbjct: 57 MNNQMLCGERVTVELAKGTQRWGQERRDYGGGRDYGRGDYGGGYGGRNNDRGFGRRQSKF 116
Query: 108 -----SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++YRV+V L + +WQ+LKDH+R+AG++ ++ + R
Sbjct: 117 APPMRTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHKHR 159
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDI-------DLKIPPRP------PGYAFLEF 52
+R LY+G LP D R +V F YG IVD D + P G+ F+EF
Sbjct: 2 ARRLYLGRLPPDARSDDVAKFFDGYGRIVDCRVMTGSSDKRRSANPGLTAPSSGFGFVEF 61
Query: 53 EDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-----RR 107
E+ +DAEDA+ +G F G + VE A S R Y GG RG R
Sbjct: 62 ENSKDAEDAVHHFNGKPFMGVNIVVEFA------KESRPRRDVYEGGGERGFGSARSRRP 115
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
R++V+G+ SWQDLKD R AG V F+ + RD
Sbjct: 116 PGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRD 152
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GN+ DTR R+VE F YG + ++ LK GY F+EFED+RDA+DA++ DG
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPS 119
+ +G R+RVE A R +S RY S S RR+ YR+ V L +
Sbjct: 63 DMNGSRVRVEFARSPREKRNS--RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST 120
Query: 120 SASWQ 124
SWQ
Sbjct: 121 RTSWQ 125
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ + R +V F KYG IV++ K +AF+E+E AE AI+ +G
Sbjct: 227 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQ 281
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------SYSSGGSRGVSRRSDYRVLVTGLPSSA 121
F G L V+ H G + D S +YS + +++ R++V + A
Sbjct: 282 FFFGEELNVQPHHAGNYFHNRSDNRSFYPPYGRTYSPNRNESREKKNALRIVVKNIDEKA 341
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCLY 181
SWQDLKD R G V ++ + +D + + ++ ++ E +++A +L G F+ L
Sbjct: 342 SWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNSET----VKKAVEVLNGRKFNGLA 397
Query: 182 RFRIFFI 188
+ F+
Sbjct: 398 VEVMKFV 404
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL + E+EDLF KYGP+ +I I PPG+AF+E+ED RDAEDA+RG DG
Sbjct: 13 VYIGNLKSNANKYEIEDLFTKYGPLKNI--WIARNPPGFAFIEYEDPRDAEDAVRGLDGT 70
Query: 69 NFDGYRLRVELAHGGR 84
G R+ V+++ G R
Sbjct: 71 RCCGSRIIVQMSTGKR 86
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL-AHGGRRHSSSMDRYSSYSS---GGSR 102
YAF+EFE R AEDA+ R GY + G LRVE A RR S ++ + + GGS
Sbjct: 6 YAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSRRAGSGVNPNTIPTGSFGGGSA 65
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 142
G RR+ +RVLV+ LP WQ LKDHMR+AG V F++V
Sbjct: 66 GPPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVL 105
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 181 YRFRIFFIYFKCMRLSYFKHFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEF 236
+R + F+ C H R++ + + + G+V+Y +D++YA+R LD++E
Sbjct: 73 HRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVLSQGRGVVEYEHPEDLQYAVRSLDKTEL 132
Query: 237 RNAFSRSYVRVREYDSRRSYSR 258
R S ++V + S R Y R
Sbjct: 133 RVDGRGSIIKVEKDYSARDYDR 154
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS +YVG L R R+VE F +G I +I+LK G+ F+EFEDYRDA+DA+
Sbjct: 40 SSGRVYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYE 94
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSM--------DRYSSYSSGGSR-------------- 102
+G G R+ +E A G R D++ GG
Sbjct: 95 LNGKELVGERVIIEHARGPARGRDEYRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGSR 154
Query: 103 -----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
G R+++R++V L S SWQDLKD+MR+AG+V F+ +
Sbjct: 155 SSQRYGPPVRTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHK 200
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R H ++ + R RR+ +R+ ++GLP
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGAR-HREGGPGFTHERNSQPR--PRRTPHRMQISGLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
+ SWQDLKD R++G DV +S+ R++
Sbjct: 111 NETSWQDLKDFARQSGLDVVYSETTRNQ 138
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 20/150 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-----------DRYS---SYSSGGSR-GVSRRSDYRVL 113
R+ +E A R M +R++ S S G SR G R+++R++
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRII 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
V L S SWQDLKD MR+AG+V + R
Sbjct: 121 VENLSSRVSWQDLKDFMRKAGEVTYVDAHR 150
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + ++ R RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREGG--NFGNHERTAPR--PRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD 144
+ SWQDLKD R++ DV +S+ RD
Sbjct: 112 NDTSWQDLKDFARQSSLDVVYSETGRD 138
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 45/184 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M +R +Y+G L R R+VE F YG + D+ LK GY F+EFEDYRDA+D
Sbjct: 236 MKNRMGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLK-----NGYGFVEFEDYRDADD 290
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR---------GVSRRSDYR 111
A+ +G + G R+ VE A GG R + Y Y G R++YR
Sbjct: 291 AVYELNGKDLAGERVIVEHARGGPRGDDRRNSYRDYPPARRSRGGGGRDKYGPPTRTEYR 350
Query: 112 VLVTGLPSSASWQ-------------------------------DLKDHMRRAGDVCFSQ 140
++V L S SWQ DLKD+MR+AG+V ++
Sbjct: 351 LIVENLSSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAGEVTYAD 410
Query: 141 VFRD 144
++
Sbjct: 411 AHKE 414
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLK 127
DLK
Sbjct: 119 DLK 121
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + ++ R RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREGG--NFGNHERTAPR--PRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD 144
+ SWQDLKD R++ DV +S+ RD
Sbjct: 112 NDTSWQDLKDFARQSSLDVVYSETGRD 138
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 24/154 (15%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRS+R +Y G LP D R R++E YG + +I +K+ GY F+EF+DYRDA+D +
Sbjct: 2 SRSTR-VYFGRLPRDCRERDLEKFVRGYGRVREISMKL-----GYGFVEFDDYRDADDCV 55
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS-----------SGGSRGVSRRSDYR 111
+G N G R+ VE HS + R S Y S R R+++R
Sbjct: 56 YDLNGRNLLGERVVVE-------HSRNPSRGSDYGYRRDSSSRSRSSRRGRTPPIRTEHR 108
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+ V L S ++WQDLK++M + G+V F+ + R
Sbjct: 109 LAVENLSSRSNWQDLKEYMGKVGEVTFADAHKRR 142
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 17/188 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ D R +V F KYG IV++ K +AF+E+E AE AI+ +G
Sbjct: 140 IFVGNISPDAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKISHAEIAIKEENGQ 194
Query: 69 NFDGYRLRVELAHGGRR-HSSSMDR-------YSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
F G L V+ H G H+ + +R +YS + +++ R++V +
Sbjct: 195 FFFGEELNVQPHHAGNYFHNRNDNRGFYPPPYARNYSPNRNENREKKNALRIVVKNVDEK 254
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKD R G V ++ + +D + + ++ ++ N+ +++A +L G F+ +
Sbjct: 255 ASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYY----NYENVKKAVEVLNGRKFNGI 310
Query: 181 YRFRIFFI 188
+ F+
Sbjct: 311 SVEVMKFV 318
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 17/145 (11%)
Query: 37 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY 96
D+K P GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y
Sbjct: 14 DVKEPQ--AGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGY 71
Query: 97 S---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR------- 145
SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 72 GYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIE 131
Query: 146 ----GELHWRMLRFWGGEVNWGEIR 166
++ + + G EVN +IR
Sbjct: 132 FVSYSDMKRALEKLDGTEVNGRKIR 156
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Query: 30 YGPIVDIDLKIP--PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 87
+G I ID+K+ YAF+ + D +DAE AI RDGY FDG RLRVE + +
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFSGENK--- 57
Query: 88 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
S +Y G G R+++R++V+ LP + WQ LKD MR+ GDV ++ + +G
Sbjct: 58 -SFGKYRRKEDGI--GPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGKG 113
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ SS LY+GNLP D +VE F +G ++K+ G+ F+E+ED DA D
Sbjct: 1 MTEVSSTRLYLGNLPRDATKADVEAHFATHGTGTIKEIKLMN---GFGFIEYEDAMDARD 57
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ G G RL V+ A G R+ D +++ R RR+ +R+ ++GL
Sbjct: 58 VVPAFHGSELKGDRLTVQFARGSRQR----DNFAATDRTAPR--PRRTPHRMQISGLSGE 111
Query: 121 ASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++ DV +S+ RDR
Sbjct: 112 TSWQDLKDFARQSSLDVVYSETGRDR 137
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++ DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGKLSYHVREKDIQRFFGGYGKLMETDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSRRSDYRVLV 114
G R+ VE A G RR G S G R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLIV 118
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L S SWQDLKD MR+AG+V ++ ++R
Sbjct: 119 ENLSSRCSWQDLKDFMRQAGEVTYADAHKER 149
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 24/151 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM------------DRYS---SYSSGGSR-GVSRRSDYRV 112
R+ +E A R H +R++ S S G SR G R+++R+
Sbjct: 61 VLCSERVTIEHA---RNHRGRGGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEHRI 117
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
+V L S SWQDLK MR+AG+V + R
Sbjct: 118 IVENLSSRVSWQDLKGFMRKAGEVTYVDAHR 148
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 30/182 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I D+ LK G+ F+ F+D RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGYRLRVELAHGGRR-------------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
+ G R+ +E+A G R SSS ++G+ YR++V
Sbjct: 62 SLCGERVMLEIAKGTPRGPGGDRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLIVE 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVNWGE 164
L S +WQDLKD+MR+ G+V ++ F R E+ + + + G E+N
Sbjct: 121 NLSSRVTWQDLKDYMRQCGEVVYADANRYRRNEGVVEFSSRKEMKYAIEKLNGTEINGRH 180
Query: 165 IR 166
I+
Sbjct: 181 IK 182
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + EVE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKAEVEGHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR---YSSYSSGGSRGVSR--RSDYRVL 113
D + DG +F G RL V+ A G R ++ ++ R R R+ +R+
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHRDGGAAPGGFNNNNNTHNERAAPRPRRTQHRMQ 113
Query: 114 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 144
+TGLP+ SWQDLKD R++ DV +S+ RD
Sbjct: 114 ITGLPTDTSWQDLKDFARQSSLDVVYSETGRD 145
>gi|254565225|ref|XP_002489723.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|238029519|emb|CAY67442.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|328350141|emb|CCA36541.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 329
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS S+ L+V LPGD R E++DLF K+GPI ++ + GYAF+E+E+ DA
Sbjct: 1 MSDLSTSQLFVRPLPGDVRPEELQDLFGKFGPIKEVKIMR-----GYAFVEYEEGADASA 55
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
A+ + F L++E A SY ++R + RV VT +P S
Sbjct: 56 ALENLNNTPFGDQDLQIEFAK----------EKPSY--------AKRGENRVKVTNIPES 97
Query: 121 ASWQDLKDHMRRAGDVC 137
+WQDLKD + + D+
Sbjct: 98 IAWQDLKDFIAKEIDIL 114
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G F G RL V+ A G R + G R R R+ YR+ ++G
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGGAGNGSGFSGERSAPRPRRTPYRMQISG 115
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFR 143
LP+ SWQDLKD R++ DV +S+ R
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGR 143
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G +F G RL V+ A G R + +++ R R R+ +R+ ++G
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTRNRDT-------FANNPERTAPRPRRTPHRMQISG 108
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDR 145
LP SWQDLKD R++ DV +S+ RDR
Sbjct: 109 LPGETSWQDLKDFARQSSLDVVYSETGRDR 138
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G +F G RL V+ A G R + +++ R R R+ +R+ ++G
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTRNRDT-------FANNPERTAPRPRRTPHRMQISG 108
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDR 145
LP SWQDLKD R++ DV +S+ RDR
Sbjct: 109 LPGETSWQDLKDFARQSSLDVVYSETGRDR 138
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 37/186 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG +VD+ +K G+ F++F+D RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
+ G R+ +E + R S R ++ GG R S R + +R+++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGSGYRGREPTFRRGGERQFSNRYSRPCSTRFRLVIDN 118
Query: 117 LPSSASWQDLKDHMRRAGD----------------VCFSQVFRDRGELHWRMLRFWGGEV 160
L + SWQD+KDH+R+ G VCFS +L M + G E+
Sbjct: 119 LSTRFSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFST----HDDLREAMNKLQGEEL 174
Query: 161 NWGEIR 166
N +++
Sbjct: 175 NGRKLK 180
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G F G RL V+ A G R + G R R R+ YR+ ++G
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGGAGNGSGFSGERSAPRPRRTPYRMQISG 115
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFR 143
LP+ SWQDLKD R++ DV +S+ R
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGR 143
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M ++VGNL R++ D F K+G + + + PPG+AF+ F D RDA D
Sbjct: 1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKV--WVARNPPGFAFVWFADDRDAGD 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----------------G 103
A+R DG + G RVE++H R GG G
Sbjct: 59 AVREIDGKSIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGYGGGGGGGGGYGAPRVGG 118
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
+ R+ Y+V +TGLP W +LKD +R+AGDV ++ V D G
Sbjct: 119 AAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEG 161
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +Y+GNL E+ED F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRH 86
DG G R+RVE++ G R+
Sbjct: 68 DGTRVCGQRVRVEMSSGQSRN 88
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G LP D R +V F YG IVD + G+ F+EFE RDA+DA+R
Sbjct: 2 ARRLYLGRLPPDARSEDVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDADDAVRDF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G + VE A S R + + R +R++V+G+ SWQD
Sbjct: 57 NGKAFMGANIVVEFAK------ESRPRREVFEPERAPRARRPPGFRLVVSGISRDTSWQD 110
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD R AG V ++ + RD
Sbjct: 111 LKDFGREAGSVSYADIDRD 129
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S S+ +YVG L TR R++ED F KYG I+ +D+K GYAF+E+ D RDA+DA+
Sbjct: 2 SGSNCVVYVGRLSSRTRERDLEDAFSKYGRIIRLDMKA-----GYAFIEYNDSRDADDAV 56
Query: 63 RGRDGYNFDGYRLRVELAHGG 83
RG DG + DG R+ VE +H G
Sbjct: 57 RGMDGNDLDGARISVEPSHRG 77
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 75/159 (47%), Gaps = 27/159 (16%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +YVG LP D R +++DLF YG + D+ + + F+EFE RDAED
Sbjct: 1 MSTR----VYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMG-----SFGFVEFEHPRDAED 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS----SMDRYSSYSSGGSRGVSRR--------- 107
A++ DG NF G R+ V+ A G R D Y R R
Sbjct: 52 AVKDFDGRNFMGERIVVQHAKSGERRREPAGYGADPYDRRGGPPGREPPSRYGAPPPRRE 111
Query: 108 -----SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
+R +V+ LP + SWQDLKD R G + F+ V
Sbjct: 112 PRIRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADV 150
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +EVED F +YG I + + RPPG+AF+EFED RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEVEDAFSRYGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR 102
GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 31 GYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDK 90
Query: 103 -GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHW 150
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R ++
Sbjct: 91 YGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKR 150
Query: 151 RMLRFWGGEVNWGEIR 166
+ + G EVN +IR
Sbjct: 151 ALEKLDGTEVNGRKIR 166
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +Y+GNL E+ED F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRH 86
DG G R+RVE++ G R+
Sbjct: 68 DGTRVCGQRVRVEMSSGQSRN 88
>gi|209876590|ref|XP_002139737.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555343|gb|EEA05388.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ R ++VGNLP +++ D F K G I ++LK + F+E+E+ AE A R
Sbjct: 7 NPRKVFVGNLPAGYAEQDLRDFFSKVGTISKLELKQ-----RFCFIEYEEESQAEAAHRE 61
Query: 65 RDGYNFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
DG F G R+ V+ L +++ +Y+ RG R+ YRV V L +
Sbjct: 62 LDGVEFGGQRIAVQPHDPLVRTKDVENTNKPQYNRPLPSDGRGPPRKH-YRVCVFNLDEN 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRIL 172
ASW+DLKD+ R+ G+V +S VF H++ + G V + + E R L
Sbjct: 121 ASWRDLKDYGRQIGEVNYSAVF------HYQGQKV--GVVEYLTVEEMKRAL 164
>gi|156098601|ref|XP_001615316.1| alternative splicing factor ASF-1 [Plasmodium vivax Sal-1]
gi|148804190|gb|EDL45589.1| alternative splicing factor ASF-1, putative [Plasmodium vivax]
Length = 208
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG--YAFLEFEDYRDAE 59
+ +S +YVGN+PG +E+ F ++G I +ID+K G YAF+E+E Y+ AE
Sbjct: 3 AGKSGHRIYVGNIPGSMSKQEIIKAFEEFGKITEIDIKYNRNTNGTNYAFIEYESYKSAE 62
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------RS 108
I ++G GY L+VE + + + GG VS+ RS
Sbjct: 63 KTIENKNGQKLKGYMLKVEYSIDKKNKEGG----DLIALGGREAVSKGLLTNVRLPKNRS 118
Query: 109 DYRVLVTGLPSSASWQD-LKDHMRRAGDVCFSQV 141
YRV+V P D +K + +AG V ++Q+
Sbjct: 119 HYRVVVKNFPRKKIKLDGIKTFLMKAGKVIYTQL 152
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G +P D R +V+ F YG IVD + G+ F+EFE +DAE+ ++
Sbjct: 2 TRRLYLGRIPTDARSEDVQKFFEGYGRIVDCRVMT-----GFGFVEFESSKDAEEVVQVF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G + VE A R Y + R R R++V+G+ SWQD
Sbjct: 57 NGKAFMGAPILVEFAKENRPRRDDDRGYGGGGAYPPRA-RRPPGVRLIVSGISRDTSWQD 115
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD R AG++ F+ + RD
Sbjct: 116 LKDFGREAGNITFADIDRD 134
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ +I + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHELEGKFSKYGPLRNI--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG + G R+RVE+
Sbjct: 68 DGVHLCGTRVRVEM 81
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +YVG+L + E+ED F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS 88
A+RG DG G R RVE+++GGR + S
Sbjct: 59 AVRGLDGRTICGRRARVEMSNGGRGYGS 86
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V+ F +G I+D + G+ F+EFE +DAE+A+
Sbjct: 2 SRRLYLGRLPPDARSEDVQKFFDGFGRIIDCRVMT-----GFGFVEFESPKDAEEAVHTF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G +F G + VE A R Y + G R R R++VTG+ SWQD
Sbjct: 57 NGKSFMGANIVVEFAKESRPRREP---YENERGHGPR-ARRPPGIRLVVTGVSRDTSWQD 112
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD R AG V F+ + R+
Sbjct: 113 LKDFGRDAGSVSFADIDRE 131
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 38 LKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS 97
L++ P Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y
Sbjct: 18 LEVLHPAPRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYG 77
Query: 98 ---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-------- 145
SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 78 YRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEF 137
Query: 146 ---GELHWRMLRFWGGEVNWGEIR 166
++ + + G EVN +IR
Sbjct: 138 VSYSDMKRALEKLDGTEVNGRKIR 161
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 99
G R+RVE+++G R DR S +S+
Sbjct: 71 RCCGTRIRVEMSNGRTRR----DRRSIFSTN 97
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 16/152 (10%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
T+++G L R +++ED F KYG + I L+ Y F++F+D RDAEDAI+ DG
Sbjct: 6 TVFIGGLSDRARDKDIEDFFDKYGKVTQIRLR-----DRYGFVDFDDRRDAEDAIKDLDG 60
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-------RRSDYRVLVTGLPSS 120
+ G R+R+ELA+ R S R G G R+ + + V L S
Sbjct: 61 SSLCGERVRLELANRSRGSRRSGSRDRGRRGGDRGGDERRGSNRPHRTRFTLEVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVF----RDRGEL 148
SW DLKD MR+AG+V ++ ++RGE+
Sbjct: 121 VSWADLKDMMRKAGEVTYTDAHQRMGKNRGEV 152
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ + R +V F KYG IV++ K +AF+E+E AE AI+ +G
Sbjct: 311 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQ 365
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS--------SYSSGGSRGVSRRSDYRVLVTGLPSS 120
F G L V+ H G ++ D + +YS + +++ R+++ +
Sbjct: 366 LFFGEELNVQPHHAGNYFNNRNDNRNYYPPTYGRNYSPNRNEIREKKNALRIVIRNVDEK 425
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSCL 180
ASWQDLKD R G V ++ +F+D + + ++ ++ N+ +++A +L G F+ +
Sbjct: 426 ASWQDLKDFGRDIGSVNYANIFQDENKERFGIIEYY----NYENVKKAVEVLNGRKFNGI 481
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 18/153 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR------YSSYSSGGSRGVSRRSDYRV 112
D + DG +F G RL V+ A G R Y+ + R RR+ +R+
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGSRHREQGGGGGGGGGGYNHDRNSAPR--PRRTPHRM 111
Query: 113 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 144
++GLP+ SWQDLKD R++G DV +S+ R+
Sbjct: 112 QISGLPNDTSWQDLKDFARQSGLDVVYSETNRN 144
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L++GNL D R++E++F KYG + +I +K Y F+EF+D+RDA+DA+ +
Sbjct: 25 LFIGNLSKDADKRDLENIFKKYGTVKEIKIKATG-SNHYGFIEFQDHRDAKDALDDCNNM 83
Query: 69 NFDGYRLRVELAHGGRR 85
F G ++R+E HGG+R
Sbjct: 84 EFKGKQIRLEFGHGGKR 100
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDACRSLDGQ 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 40 VYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGT 97
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 98 RCCGTRVRVEM 108
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 99
DG G R+RVE+++G R YSSG
Sbjct: 68 DGTRCCGTRVRVEMSNGRSRRGGGRRGPMRYSSG 101
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+
Sbjct: 6 SVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKE 65
Query: 65 RDGYNFDGYRLRVELAHGGR 84
+DG +F G +LRVE+ R
Sbjct: 66 KDGCDFGGNKLRVEVPFNAR 85
>gi|308482317|ref|XP_003103362.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
gi|308260152|gb|EFP04105.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
Length = 201
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 46/141 (32%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M +R +YVGNLP D R +E+ DLFYKYG + IDLK R P +AF+EF D+R+
Sbjct: 1 MVTRDETQIYVGNLPNDVRTKEIGDLFYKYGRVRYIDLKT-CRGPSFAFVEFSDHRN--- 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
G R+ ++R+ VT LP
Sbjct: 57 ------------------------------------------GPQRKFNFRIRVTNLPRP 74
Query: 121 ASWQDLKDHMRRAGDVCFSQV 141
W DLKD+M+ D+ F V
Sbjct: 75 TRWHDLKDYMQSIKDIVFGIV 95
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE+++G
Sbjct: 71 RCCGTRIRVEMSNG 84
>gi|124804016|ref|XP_001347876.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
gi|23496128|gb|AAN35789.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
Length = 200
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 20/140 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG--YAFLEFEDYRDAEDAIRGRD 66
LYVGN+PG +E+ +F +YG I DID+K G YAF+E+E+ + AE I+ R+
Sbjct: 11 LYVGNIPGSATRQELIKIFEEYGKISDIDIKYNRNSNGTNYAFIEYENPKSAEKTIQKRN 70
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
G F GY L+VE + +++ D Y RS+YRV+V P ++++
Sbjct: 71 GKKFKGYMLKVEYSI-EKKNRDLNDIY-------------RSEYRVVVKHFPR--FFKNI 114
Query: 127 KDHMRRAGDVCFSQVFRDRG 146
K+ + RAG V + + +D G
Sbjct: 115 KEFLSRAGKVLY--IHKDNG 132
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +Y+GNL E+ED F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE++ G
Sbjct: 68 DGTRVCGQRVRVEMSSG 84
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RS +L++G L TR R++ED F KYG I+ D+K YAFL+FED+RDAED
Sbjct: 1 MSRRSQGSLFIGRLDKHTRTRDLEDRFEKYGRILRCDVKYGAEM-AYAFLDFEDHRDAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGG-RRHSSSMDRY 93
A++ +G + G + VE A G RR SS Y
Sbjct: 60 ALKEENGREYQGVSMVVEWAKGAPRRQQSSQQAY 93
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L TR R+VE F +G + +++LK G+ F+EF+D RDA+DA+ +G
Sbjct: 5 VYIGRLSYQTRERDVERFFRGFGHLREVNLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------------------- 106
+ G R+ +E A G R DR SGG RG R
Sbjct: 60 DLCGERVIIEHARGPVRR----DR----DSGGYRGSERDYRGDRGGGYGPPRRRGGGGGI 111
Query: 107 -------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GEL 148
R+D R++V L S SWQDLKD+MR+AG+V ++ ++ ++
Sbjct: 112 DKYGPPTRTDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHKNEGVVEFATYSDM 171
Query: 149 HWRMLRFWGGEVNWGEIR 166
M + G E+N ++R
Sbjct: 172 KNAMSKLDGTEINGRKVR 189
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ I PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKFEIENAFNKYGPLRNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 37/186 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG +VD+ +K G+ F++F+D RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
+ G R+ +E + R R ++ GG R S R + +R++V
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGGGYRGREPTFRRGGERQFSNRYSRPCSTRFRLVVDN 118
Query: 117 LPSSASWQDLKDHMRRAGD----------------VCFSQVFRDRGELHWRMLRFWGGEV 160
L + SWQD+KDH+R+ G VCFS +L M + G E+
Sbjct: 119 LSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFST----HDDLRDAMNKLQGEEL 174
Query: 161 NWGEIR 166
N +++
Sbjct: 175 NGRKLK 180
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 211 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
G GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 3 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L + +E+ED F YGP+ + + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 16 VYVGDLGSNADKQEIEDAFSYYGPLRSV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 74 TICGRRARVELSTG 87
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWL--ARRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 96
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWR 151
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R ++
Sbjct: 97 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRA 156
Query: 152 MLRFWGGEVNWGEIR 166
+ + G EVN +IR
Sbjct: 157 LEKLDGTEVNGRKIR 171
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 23/139 (16%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGVS 105
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR SS Y S SG G R
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSS----YGSGRSGYGYRRSG 61
Query: 106 R-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GE 147
R R++YR++V L S SWQDLKD+MR+AG+V ++ + R +
Sbjct: 62 RDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSD 121
Query: 148 LHWRMLRFWGGEVNWGEIR 166
+ + + G EVN +IR
Sbjct: 122 MKRALEKLDGTEVNGRKIR 140
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+LP D + +E+E F YGP+ + + PPG+AF+EFED RDA+D++RG
Sbjct: 28 SDTKVYVGDLPRDAQEKELERAFSYYGPLKSV--WVARNPPGFAFVEFEDPRDADDSVRG 85
Query: 65 RDGYNFDGYRLRVELAHGGRR 85
DG + G R+RVEL+ G R
Sbjct: 86 LDGSSLCGTRVRVELSTGKVR 106
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 21 REVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA 80
++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A
Sbjct: 2 KDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHA 56
Query: 81 HGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAG 134
R RYS +SS R R R++ R++V L S SWQDLKD MR+AG
Sbjct: 57 RARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAG 116
Query: 135 DVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
+V F+ R + +L + + G E+N +I+
Sbjct: 117 EVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK 159
>gi|448878364|gb|AGE46145.1| arginine/serine-rich splicing factor SR30 transcript IV [Sorghum
bicolor]
Length = 97
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 19/71 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYK-------------------YGPIVDIDLKIP 41
M+ R+ T+YVGNLPGD R REV+DLFYK YG IV+IDLKIP
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKSNGWSSGREGNVDCEWSIFYGRIVEIDLKIP 60
Query: 42 PRPPGYAFLEF 52
PRPPG+AF+E
Sbjct: 61 PRPPGFAFVEL 71
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G LP +R +++E F + G I I LK GYAF++F RDA DA+ +G
Sbjct: 6 VFIGRLPRGSREQDIEKFFSRCGRIRGIMLKR-----GYAFVDFRTDRDASDAVHDMNGR 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ G R+ VE+A G +R S ++ S S+ S +Y+++V L S SW+D KD
Sbjct: 61 SMRGERMTVEIASGRQRKGSRDQKHRSSSARND--ASSNGEYQIVVENLSSRISWKDFKD 118
Query: 129 HMRRAGDVCFSQVFRDRGELHWRMLRF 155
+RR D+ V + H +++F
Sbjct: 119 MIRRE-DIEVVHVDAHKLHKHQGIVKF 144
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 27/175 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------RSDYRVLVTGL 117
R+ +E A R GG G R+++R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGGGYRYGPPVRTEHRLIVENL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEVN 161
S SWQDLKD MR+AG+V F F R ++ + +F G E+N
Sbjct: 121 SSRISWQDLKDMMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKSAISKFDGTELN 175
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 21 REVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE 78
++VE+ F ++G I DI L G+ F+E+ED DA D + G +F G RL V+
Sbjct: 118 QDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVPAYHGTDFKGSRLTVQ 172
Query: 79 LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVC 137
A G R + +S S + RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 173 FARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVV 227
Query: 138 FSQVFRD---RGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
+S+ RD RG + + G ++ + GR G +C
Sbjct: 228 YSETLRDHEGRGFVEFET----GADLKTAIEKLDGREFKGSRVTC 268
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIETAFSKYGPLRNV--WVARNPPGFAFVEFEDSRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 29 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 86
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 87 RLCGTRVRVEMSH 99
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE+++G
Sbjct: 71 RCCGTRIRVEMSNG 84
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 65
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWR 151
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R ++
Sbjct: 66 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRA 125
Query: 152 MLRFWGGEVNWGEIR 166
+ + G EVN +IR
Sbjct: 126 LEKLDGTEVNGRKIR 140
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRDG 67
+++GNLP D + D F G I ID+K PGY F+EF DAE A++ R+G
Sbjct: 173 IFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFVKLEDAEKAVKTRNG 232
Query: 68 YNFDGYRLRVELAH-GGRRHSSSM-----DRYSSYSSG-GSRGVSRRSDYRVLVTGLPSS 120
+ +RVE + GG R M + YS G G RS +RV V P S
Sbjct: 233 FPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSVARGRGGPQLRSVHRVYVDNCPPS 292
Query: 121 ASWQDLKDHMRRAGD-----VCFSQV 141
+WQD+KD R D VCFS +
Sbjct: 293 TTWQDIKDLFRGKNDPTGIEVCFSAI 318
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAH 81
DG G R+RVE+++
Sbjct: 68 DGTRCCGTRVRVEMSN 83
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +YVG+L + E+ED F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR 84
AIRG DG G R RVE+++G R
Sbjct: 59 AIRGLDGRTICGRRARVEMSNGSR 82
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG----GRRHSSSMDRY 93
DG G R+RVE+++G RR+ ++D Y
Sbjct: 68 DGTRCCGTRIRVEMSNGRTRRDRRYFLNVDSY 99
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIEGKFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG + G R+RVE+
Sbjct: 68 DGIHLCGTRVRVEM 81
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAH 81
DG G R+RVE+++
Sbjct: 68 DGTRCCGTRVRVEMSN 83
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 18/153 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + ++E F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKADIEAHFSTHGTGDIAEIKLMN-----GFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR------YSSYSSGGSRGVSRRSDYRV 112
D + DG F G RL V+ A G R ++ +++ S R RR+ +R+
Sbjct: 56 RDVVP--DGSTFLGERLTVQFARGNRHRENNGGGGGGGGGFNNDRSSAPR--PRRTPHRL 111
Query: 113 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 144
++GLP SWQDLKD R G DV +S+ R+
Sbjct: 112 QISGLPPDTSWQDLKDFARTPGLDVVYSETGRN 144
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|237843959|ref|XP_002371277.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
gi|211968941|gb|EEB04137.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
Length = 171
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + R +Y+G + DT E+E +F KYG I + + PPG+AFL F+DYRDA+D
Sbjct: 6 MDDQEGRKVYIGGIEADTTTEELESIFGKYGTISTV--WVARNPPGFAFLTFDDYRDAKD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHG 82
A+ DGY + G +RVE+A G
Sbjct: 64 AVAELDGYRYRGKPIRVEIARG 85
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 60
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWR 151
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R ++
Sbjct: 61 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRA 120
Query: 152 MLRFWGGEVNWGEIR 166
+ + G EVN +IR
Sbjct: 121 LEKLDGTEVNGRKIR 135
>gi|221483766|gb|EEE22078.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 184
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + R +Y+G + DT E+E +F KYG I + + PPG+AFL F+DYRDA+D
Sbjct: 1 MDDQEGRKVYIGGIEADTTTEELESIFGKYGTISTV--WVARNPPGFAFLTFDDYRDAKD 58
Query: 61 AIRGRDGYNFDGYRLRVELAHG 82
A+ DGY + G +RVE+A G
Sbjct: 59 AVAELDGYRYRGKPIRVEIARG 80
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 26/154 (16%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR ++VG LP R++E F +G I DI+LK G+AF+EF+D RDA+DA+
Sbjct: 2 SREGGRVFVGRLPPRANDRDLEKFFKGFGRINDINLK-----QGFAFVEFDDARDADDAV 56
Query: 63 RGRDGYNFDGYRLRVELAHGG-----------RRHSSSMDRYSSYSSGGSRGVSRRSDYR 111
+ G R+ VE AH R S DRY Y++ +YR
Sbjct: 57 YELNHKELLGERVSVEHAHPSRGGGGGGGRGFRDRSPRRDRYPPYNT----------EYR 106
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++V L + A WQDLKD+MR+AG+V F+Q +DR
Sbjct: 107 LIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDR 140
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 38/178 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + ++++GNL R ++E F YG + DI LK GY F++F+D DA+D
Sbjct: 406 MGAGEMHSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKD 460
Query: 61 AIRGRDGYNFDGYRLRVELAH------------------------GGRRHSSSMDRYSSY 96
A++ DG G ++R+EL++ R +S R S Y
Sbjct: 461 AVQDLDGKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFY 520
Query: 97 SSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRM 152
R G +++ Y + + L SWQDLKD RR G+V + GE H RM
Sbjct: 521 ERTAYRKYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSY-------GEAHDRM 571
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 71
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 72 DGTRCCGTRVRVEM 85
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 22/165 (13%)
Query: 21 REVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE 78
++VE+ F ++G I DI L G+ F+E+ED DA D + DG +F G RL V+
Sbjct: 119 QDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVP--DGTDFKGSRLTVQ 171
Query: 79 LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVC 137
A G R + +S S + RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 172 FARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVV 226
Query: 138 FSQVFRD---RGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
+S+ RD RG + + G ++ + GR G +C
Sbjct: 227 YSETLRDHEGRGFVEFET----GADLKTAIEKLDGREFKGSRVTC 267
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA-IRGRDG 67
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA +
Sbjct: 6 VYVGGLPHGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAPTQTHYI 60
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------------GVSRRS 108
+ YR+ VE A G R S + Y R G R+
Sbjct: 61 FLLLIYRVTVEPARGTARGGGSRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLRT 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
+YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 121 EYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 157
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 31/179 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V F+ R + +L + + G E+N +I+
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK 174
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 31/179 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
S SWQDLKD MR+AG+V F+ R + +L + + G E+N +I+
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK 174
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 21 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 78
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 79 RICGVRARVEISH 91
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+E+ED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKVFSKYGSIRNV--WVARNPPGFAFVEYEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE+++G
Sbjct: 71 RCCGTRIRVEMSNG 84
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + +PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 71
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 72 DGTRCCGTRVRVEM 85
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D +E+E+ F +YGPI + + RPPG+AF+EFED RDA+DA++ +G
Sbjct: 17 VFVGGLPHDATTQELEEAFGRYGPIRKV--WMARRPPGFAFIEFEDSRDADDAVKALNGA 74
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 75 RICGVRPRVEISH 87
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S +YVG+L +E+E+ F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MPSSLDCKVYVGDLGSGASKQELEEAFSYYGPLRNV--WVARNPPGFAFVEFEDVRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRH 86
A+RG DG G R+RVEL+ G R+
Sbjct: 59 AVRGLDGRTICGRRVRVELSTGKSRN 84
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 14 VYVGNLGSNAARGEIEEAFSKYGTLRNV--WVARNPPGFAFVEFEDPRDAEDAVRALDGV 71
Query: 69 NFDGYRLRVELAHGGRR 85
G R++VE++ G RR
Sbjct: 72 RLCGARVKVEMSTGKRR 88
>gi|396459915|ref|XP_003834570.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
gi|312211119|emb|CBX91205.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
Length = 493
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 99/241 (41%), Gaps = 60/241 (24%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I ++ L G+ F+E++D DA
Sbjct: 131 MTEVSSTRLYLGNLPRSATKADVEAHFQTHGTGEITEVKLMN-----GFGFIEYKDPMDA 185
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + + + RR+ YR+ +T LP
Sbjct: 186 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRITSLP 240
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMF 177
SWQDLKD R++G DV +S+V R+R G
Sbjct: 241 VETSWQDLKDFARQSGLDVVYSEVGRER----------------------------DGTG 272
Query: 178 SCLYRFRIFFIYFKCMRLSYFKHFRESYHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR 237
S LY + C V+Y + D+K A+ KLDR EF+
Sbjct: 273 SVLYMSALARPRLTC-------------------ACRFVEYETAADLKAAVEKLDRREFK 313
Query: 238 N 238
Sbjct: 314 G 314
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + +PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V F+ R
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHR 140
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 27/156 (17%)
Query: 38 LKIPPR------PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH----- 86
L PPR P Y F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 61 LTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYS 120
Query: 87 ----SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 121 YGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADA 180
Query: 142 FRDR---GELHWR--------MLRFWGGEVNWGEIR 166
++R G + +R + + G E+N IR
Sbjct: 181 HKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 216
>gi|66360300|ref|XP_627232.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
Length = 416
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP ++++D F K G I ++LK + F+E+ED AE A R DG
Sbjct: 19 VFVGNLPPGYAEQDLKDFFSKVGEIKKLELKQ-----RFCFIEYEDETQAEAAHRELDGV 73
Query: 69 NFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
F G + V+ + ++++ +Y+ RG R+ +RV V L +ASW+
Sbjct: 74 EFGGQVIAVQPHDPMVRNKETNAANKPQYNRPLPSDGRGPPRKH-FRVCVFNLDDNASWR 132
Query: 125 DLKDHMRRAGDVCFSQVFRDRGE 147
DLKD+ R+ G+V +S VF +G+
Sbjct: 133 DLKDYGRQIGEVNYSAVFHYQGQ 155
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y G LP +++E+L +G + ++D K GYA++ F++ +DA+ A+ +
Sbjct: 5 VYCGRLPATATEKDLENLVKVFGKVREVDFK-----EGYAYVVFKENKDADRAVAALNNS 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
F G ++ +E A R Y++ + G RS++RV+V L + A W +LK
Sbjct: 60 EFHGAKILMEKAKEMRNGVGGYTAAGGYTARTRQMGPPVRSEFRVIVENLSTRAKWLELK 119
Query: 128 DHMRRAGDVCFSQVFRDR 145
+ M AG+VC++ R R
Sbjct: 120 EFMNNAGEVCYADTHRRR 137
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 264
G+V++T+ +DMK AI LD+ EF +R+R+ R S+S SRSP
Sbjct: 141 GVVEFTTEEDMKRAIASLDKCEFYG----KRIRLRQELPRSGTSKSRSRSP 187
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R M + RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGARHREGGMGHERAPPR------PRRTPHRMQITGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD---RGELHWRMLRFWGGEVNWGEIREAGRILGG 174
+ SWQDLKD R++ DV +S+ RD RG + + ++ + GR G
Sbjct: 110 NDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFET----AADLRTAVEKLDGREFKG 165
Query: 175 GMFSCL 180
CL
Sbjct: 166 ARVQCL 171
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
S +Y+G LP TR +V+ FY YG I +I LK GY F+EF+ DAEDA+
Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILK-----DGYGFVEFDYSDDAEDAVY 56
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSS 120
+G G R+ VE A G +S YSS G +R G R+ +R+ V L S
Sbjct: 57 ECNGKKMLGERILVEPARG-----TSKGGYSSGRRGRARDKYGPPLRTPWRMTVENLSSR 111
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDR 145
SWQDLKD+ R+ GDV + + +
Sbjct: 112 VSWQDLKDYCRQIGDVTYGDAHKQK 136
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++GNL R+VED F K+G I +I LK G+ F+EF+D RDAEDAI +G
Sbjct: 4 VFIGNLTDRAEGRDVEDAFRKFGRIKEISLK-----NGFGFVEFDDVRDAEDAIHEMNGE 58
Query: 69 NFDGYRLRVELAH---------GGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
G R+ VELA R + S SG R R+ Y V+V L S
Sbjct: 59 RLCGDRITVELAKGGGGGGRDRSRSRSRGRSSHWDSRRSGRER--PHRTPYAVMVDNLSS 116
Query: 120 SASWQDLKDHMRRAGDVCFSQV 141
+W +LKD R+ G+V ++
Sbjct: 117 RCTWAELKDIFRKFGEVTYTDA 138
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +E+ED F YGP+ ++ + PPG+AF+EFED RDAEDAIRG
Sbjct: 6 SDCKVYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVE+++G
Sbjct: 64 LDGRTICGRRARVEMSNG 81
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+ G RL VE A G RR S G R++YRV+V L S
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLSSRV 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFR 143
SWQDLKD MR+AG+V ++ +
Sbjct: 119 SWQDLKDLMRKAGEVTYADAHK 140
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 31/163 (19%)
Query: 1 MSSRSSRTLYVGNLPGD---------------TRMREVEDLF--YKYGPIVDIDLKIPPR 43
MS SS LY+GNLP + +++E+ F + G I +I L
Sbjct: 1 MSEVSSTRLYLGNLPRNADSKGHLFCLDSLPPVNKQDIEEHFGSHGTGKITEIKLMQ--- 57
Query: 44 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG 103
G+ F+E+ED DA+D + DG +F G RL V+ A G RR + +
Sbjct: 58 --GFGFIEYEDAMDAKDVV--PDGTDFKGERLTVQFARGPRRREP----FPGPPERSAAP 109
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR 145
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR
Sbjct: 110 RPRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDR 150
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 214 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 273
G V++ + +D++ A+ KLD ++F+ + ++ R R PY SRS R
Sbjct: 154 GFVEFENGNDLRTAVEKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRG 208
Query: 274 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 306
P Y P + R YSPRG Y RSP
Sbjct: 209 PPYP----PVDEYDRRGPPRGYSPRGHYRERSP 237
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKHEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +E+ED F YGP+ ++ + PPG+AF+EFED RDAEDAIRG
Sbjct: 6 SDCKVYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVE+++G
Sbjct: 64 LDGRTICGRRARVEMSNG 81
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 26 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 85
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWR 151
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R ++
Sbjct: 86 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRA 145
Query: 152 MLRFWGGEVNWGEIR 166
+ + G EVN +IR
Sbjct: 146 LEKLDGTEVNGRKIR 160
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +++LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMD---------------RYSSYSSGGSR----------- 102
R+ +E A R R+SSY G
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSSRY 120
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
G R+++R++V L S SWQDLKD MR+AG+V F R
Sbjct: 121 GPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHR 161
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 33/186 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LPGD R R+++ F K+G + +I +K Y FL++E R+AEDA+
Sbjct: 28 IYIGKLPGDIRERDIDKAFSKFGHVREIAMK-----GNYCFLQYEKTREAEDAVYEMHDR 82
Query: 69 NFDGYRLRVELAHGGRR-----------------HSSSMDRYSSYSSGGSRGVSRRSDYR 111
+F G R++VE A + +S S SS R +RSDYR
Sbjct: 83 SFFGERIQVEHARQPKEFGFRAPSRFGGSRGYGGYSRSSTYSSSRDYSRRRSPPQRSDYR 142
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQV-----------FRDRGELHWRMLRFWGGEV 160
+ VT L + QDLK M++AGDV FS F R ++ + + G E+
Sbjct: 143 LSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVGEGVVEFASRKDMERALKKLDGLEI 202
Query: 161 NWGEIR 166
N I+
Sbjct: 203 NGKPIK 208
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +Y+GNL + E+E F KYGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 8 QSCKVYIGNLGQNGTKHEIEASFTKYGPLKNT--WIARNPPGFAFVEFEDPRDAEDAVRG 65
Query: 65 RDGYNFDGYRLRVELA 80
DG G R+RVE++
Sbjct: 66 LDGTRICGVRVRVEMS 81
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V F YG I+D + G+ F+EFE +DAEDA+
Sbjct: 2 SRRLYLGRLPPDARSDDVSKFFEGYGRIIDCRVMT-----GFGFVEFESSKDAEDAVHQF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G + VE A R R R R++V+G+ SWQD
Sbjct: 57 NGKPFMGTAIVVEFAKESRPRREVAPR-----------ARRPPGVRLIVSGISRDTSWQD 105
Query: 126 LKDHMRRAGDVCFSQVFRD 144
LKD R V F+ + RD
Sbjct: 106 LKDFGREVASVSFADIDRD 124
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 11 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 68
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 69 DGTRCCGTRVRVEM 82
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 82
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-----------GELHWR 151
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R ++
Sbjct: 83 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRA 142
Query: 152 MLRFWGGEVNWGEIR 166
+ + G EVN +IR
Sbjct: 143 LEKLDGTEVNGRKIR 157
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGSNASKHEIEAAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRIRVEM 81
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA--------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ G RL VE A R G R++YRV+V L S
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSR 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFR 143
SWQDLKD MR+AG+V ++ +
Sbjct: 119 VSWQDLKDLMRKAGEVTYADAHK 141
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKFGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + +++ + RR+ +R+ +TGLP
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHREGGS--AAGFNNERAPPRPRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD 144
+ SWQDLKD R++ DV +S+ RD
Sbjct: 112 TDTSWQDLKDFARQSSLDVVYSETGRD 138
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG 103
G R+RVE++ G R S S +G +RG
Sbjct: 71 RCCGTRIRVEMSSGRSRERSRRGGGQSGEAGSNRG 105
>gi|221056122|ref|XP_002259199.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809270|emb|CAQ39972.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG--YAFLEFEDYRDAE 59
+ +S +YVGN+PG T E+ F ++G I ID+K G YAF+E+E+Y A+
Sbjct: 3 AEKSGYRVYVGNIPGSTTKEEIIKAFQEFGKITGIDIKYNRNANGTNYAFIEYENYESAK 62
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG----SRGVSRRSDYRVLVT 115
++ ++G NF G L+VE + + + G R RS+YRV+V
Sbjct: 63 KTVQKKNGQNFMGNMLKVEYTNDKKNKEGHIIPVGKEKLKGFMRNLRLPRNRSNYRVVVK 122
Query: 116 GLPSSASWQD-LKDHMRRAGDVCFSQV 141
P D +K + +AG V +Q+
Sbjct: 123 NFPKRKIQLDYVKKFLMKAGKVIHTQL 149
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 23/153 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R ++VE F YG I +I+LK G+ F+EF+D RDA+DA+ +G
Sbjct: 5 VYIGRLPYHAREKDVERFFRGYGRIREINLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSS------------MDRYSSYSSGGSR------GVSRRSDY 110
G R+ VE A G R +D G G R+DY
Sbjct: 60 ELCGERVIVENARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDY 119
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
R++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 120 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK 152
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +++ED F YG I ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 17 IYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 69 NFDGYRLRVELAHGGRRHSS 88
+ G R+RVEL++ G R +
Sbjct: 75 SICGRRVRVELSNAGSRKGA 94
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL ++E +F +YGPI ++ + PPG+AF+EFED RDAEDA++ DG
Sbjct: 13 VYIGNLGSRATKDDIEAVFSRYGPIRNV--WVARNPPGFAFVEFEDSRDAEDAVKALDGT 70
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 71 RICGARVRVEMSH 83
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG + D+ +K G+ F++F+D RDA+DA+ +G
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
G R+ +E + R S R ++ GG R S R + +R+++
Sbjct: 59 ELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDN 118
Query: 117 LPSSASWQDLKDHMRRAG 134
L + SWQD+KDH+R+ G
Sbjct: 119 LSTRYSWQDIKDHIRKLG 136
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL +VE +F KYG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 12 VYIGNLATHASRHDVESVFSKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRAVDGS 69
Query: 69 NFDGYRLRVELAHG 82
G R++ E++HG
Sbjct: 70 RICGSRVKCEMSHG 83
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +++ED F YG I ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 17 IYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 69 NFDGYRLRVELAHGGRRHSS 88
+ G R+RVEL++ G R +
Sbjct: 75 SICGRRVRVELSNAGSRKGA 94
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 1 MSSRSSR-----TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDY 55
MS + SR +YVG L + +E+ED F YGP+ ++ + PPG+AF+EF+D
Sbjct: 1 MSKKMSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFDDA 58
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELA 80
RDAED++RG DG G R+RVEL+
Sbjct: 59 RDAEDSVRGLDGRTVCGRRVRVELS 83
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L + +E+ED F YG + ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 6 SDGKVYVGDLGSNASKQELEDAFSYYGSLRNV--WVARHPPGFAFVEFEDPRDAEDAVRG 63
Query: 65 RDGYNFDGYRLRVELAHGGR 84
DG G R RVEL++G R
Sbjct: 64 LDGRTICGRRARVELSNGKR 83
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S R LY+G +P + ++E F +YG ++D+ + G+ FLE++ RDAEDA+
Sbjct: 2 SSPGRRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIM-----AGFGFLEYDQVRDAEDAV 56
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
+G F G RL VE A R S GG G R +R++V G+ S
Sbjct: 57 HDLNGREFMGDRLIVEFAKAPRGGREMYGGGGGGSYGGGGGPRRSG-FRLIVKGISHETS 115
Query: 123 WQDLKDHMRRAGDVCFSQVFRD 144
WQDLKD R+AG+V + V R+
Sbjct: 116 WQDLKDFARQAGNVIRADVDRN 137
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 22/154 (14%)
Query: 30 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 89
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 3 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 57
Query: 90 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 58 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 117
Query: 144 DR-----------GELHWRMLRFWGGEVNWGEIR 166
+ G+L + + G E+N +I+
Sbjct: 118 PKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIK 151
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 31/183 (16%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + ++++GNL R ++E F YG + DI LK GY F++F+D DA+D
Sbjct: 162 MGAGEMHSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKD 216
Query: 61 AIRGRDGYNFDGYRLRVELAH------------------------GGRRHSSSMDRYSSY 96
A++ DG G ++R+EL++ R +S R S Y
Sbjct: 217 AVQDLDGKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFY 276
Query: 97 SSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRMLR 154
R G +++ Y + + L SWQDLKD RR G+V + F + R L
Sbjct: 277 ERTAYRKYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYDNHFLSPNLANVRQLT 336
Query: 155 FWG 157
G
Sbjct: 337 VSG 339
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V ++ +
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHK 144
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 16/148 (10%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRD 57
M++ S T LY+GNLP + ++E F +G I ++ L G+ F+E++D D
Sbjct: 1 MTTEVSNTRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMN-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A D + DG +F G RL V+ A G R+ S + RR+ +R+ +TGL
Sbjct: 56 ARDVVP--DGSDFMGERLTVQFARGPRQRESGFSGHERAPP-----RPRRTPHRMQITGL 108
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRD 144
P+ SWQDLKD R+ G DV +S+ RD
Sbjct: 109 PNETSWQDLKDFARQPGLDVVYSETGRD 136
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V ++ +
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHK 144
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGYRLRVELA 80
G R+RVE++
Sbjct: 71 RCCGTRIRVEMS 82
>gi|145346370|ref|XP_001417662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577890|gb|ABO95955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 129
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R +YVGNLP D R+V+ F +G + +++K P PP +AF+ F+D RDAE A R D
Sbjct: 1 RAVYVGNLPLDASSRDVDRRFAAHGVVARVEVKRPRHPPAFAFVTFDDARDAERAARAED 60
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
G FDG R G D + S R +R++++ V V LP A W+D+
Sbjct: 61 GTTFDGRR-------GPYDRPRWRDGADARSMVRERAATRKTEHSVKVEDLPRGADWRDV 113
Query: 127 KDHMRRAGDVCFSQVF 142
KD RRAG V ++ F
Sbjct: 114 KDAFRRAGRVTYASTF 129
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
G+ F+E+ED DA D + DG +F G RL V+ A G R + ++ S S
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRHKET----FNGPSDRPSAPRP 56
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGELHWRMLRFWGGEVNWGE 164
RR+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+R + ++
Sbjct: 57 RRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGRGFVEFESH-ADLKTAV 115
Query: 165 IREAGRILGGGMFSCL 180
+ GR L G +C+
Sbjct: 116 EKLDGRELKGSQVTCV 131
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V ++ +
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHK 144
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------------RSDYR 111
R+ +E A R GG G R+D+R
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTDHR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
++V L S SWQDLKD MR+AG+V F R
Sbjct: 121 LVVENLSSRTSWQDLKDLMRKAGEVTFVDAHR 152
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ L V NL T ++++DL K G + +D P + G +EF D ++AI
Sbjct: 116 RTDHRLVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKNEGV--VEFASRSDMKNAIS 173
Query: 64 GRDGYNFDGYRLRV 77
DG +G +L++
Sbjct: 174 KLDGTELNGRKLKM 187
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 37/158 (23%)
Query: 20 MREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE
Sbjct: 50 QRDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVER 104
Query: 80 AHGGRRHSS---------------------------SMDRYSSYSSGGSRGVSR-----R 107
A G R S S++R + +S + + R R
Sbjct: 105 ARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTR 164
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 165 TEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQR 202
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V F+ R
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHR 140
>gi|342326406|gb|AEL23118.1| 52K active chromatin boundary protein [Cherax quadricarinatus]
Length = 169
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R++ F YGP+ D+ + I G+ F+E +DYRDA DA+ +G
Sbjct: 39 VYVGGLYYRVGERDLMRFFLCYGPLGDLVIMI-----GFCFVEIDDYRDAYDAVCYMNGK 93
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R +E A R SS G+ ++YR+ + L S SWQDLKD
Sbjct: 94 ELLGGRCSMEKARAAPRMMWPRAPPPIGSSSSLFGMPALANYRLTIENLSSRVSWQDLKD 153
Query: 129 HMRRAGDVCFSQ 140
MR+AG V +
Sbjct: 154 FMRQAGKVTYGH 165
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R +++ + RR+ +R+ +TGLP
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHREGGS--APGFNNERAPPRPRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD 144
+ SWQDLKD R++ DV +S+ RD
Sbjct: 112 TDTSWQDLKDFARQSSLDVVYSETGRD 138
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 23/134 (17%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS---SSMDRYSSYSSGGSRG 103
Y F+EF+D RDA+DA+ +G + G R+ VE A G R + S D+Y G
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRGYGYRRSGRDKY---------G 54
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR--------M 152
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G + ++ +
Sbjct: 55 PPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRAL 114
Query: 153 LRFWGGEVNWGEIR 166
+ G EVN +IR
Sbjct: 115 EKLDGTEVNGRKIR 128
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L + +E+ED F YGP+ ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 10 VYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 68 TICGRRARVELS 79
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +++LK G+ F+EF+D RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLKN-----GFGFVEFDDPRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMD----------RYSSYSSGGSRGVSR------------ 106
R+ +E A R R+SSY G
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGPPV 120
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
R+++R++V L S SWQDLKD MR+ G+V F R
Sbjct: 121 RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHR 157
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 21/143 (14%)
Query: 45 PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---------SSSMDRYSS 95
P Y F+EFED RDA+DA+ +G G R+ VE A G RR S S
Sbjct: 98 PRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSR 157
Query: 96 YSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR 151
+SG + G R++YR++V L S SWQDLKD MR+AG+V ++ ++R G + +R
Sbjct: 158 RTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFR 217
Query: 152 --------MLRFWGGEVNWGEIR 166
+ + G E+N IR
Sbjct: 218 SYSDMKRALDKLDGTEINGRNIR 240
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ I PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 21 REVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRV 77
+E+ED F + G I +I L G+ F+E+ED DA+D + G +F G RL V
Sbjct: 35 QEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVPAFHGTDFKGERLTV 89
Query: 78 ELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DV 136
+ A G R + +S S S RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 90 QFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDV 144
Query: 137 CFSQVFRD-RGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
+S+ D RG + + G ++ + GR G C
Sbjct: 145 VYSETGHDGRGFVEFET----GSDLKTAVEKLDGREFKGSRVLC 184
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +E+ED F YG + ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 9 SDGKVYVGDLGSSASKQELEDAFSYYGSLQNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R+RVEL++G
Sbjct: 67 LDGRTLCGRRVRVELSNG 84
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKSDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R M + RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTRHREGGMGHERAPPR------PRRTPHRMQITGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRD 144
+ SWQDLKD R++ DV +S+ RD
Sbjct: 110 NDTSWQDLKDFARQSSLDVVYSETGRD 136
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
S R +Y+GNL + + +VE LF K+G I +I + RPPG+AF+ FED RDA D
Sbjct: 5 FESTEGRKVYIGNLNPEATVEDVESLFSKFGTIGNI--WVARRPPGFAFVTFEDPRDATD 62
Query: 61 AIRGRDGYNFDGYRLRVELAHG 82
AI DG + G L+VEL+ G
Sbjct: 63 AIEELDGSEYKGQNLKVELSKG 84
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D +E+E+ F +YGPI + + RPPG+AF+EFED RDA+DA++ +G
Sbjct: 12 VFVGGLPHDATTQELEEAFGRYGPIRKVWMAR--RPPGFAFIEFEDSRDADDAVKALNGA 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRPRVEISH 82
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 36/144 (25%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S +Y+GNLP + E+E +F Y P V++ LK + F+EF++ DA+D
Sbjct: 180 MGSSDGNRVYLGNLPVNVSKSEIESVFKNYNP-VEVTLK-----ERFGFVEFDNKVDADD 233
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI D + + SG SR RS YRV++ LP
Sbjct: 234 AIH---------------------------DLHGTKVSGSSR--EERS-YRVVIKNLPPR 263
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
+WQD+KD MR+AG V F+ V +D
Sbjct: 264 TTWQDVKDFMRKAGRVVFADVLKD 287
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R ++VG+LP R++ED F + G I D+ K YAF+EF D RDA D
Sbjct: 1 MSAR----VFVGHLPRKVDRRDIEDYFDRIGRIRDVVHK-----GNYAFVEFADERDARD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS-----SGGSRGVSRRSDYRVLVT 115
AI +G ++ G R+ VELA+ RR S + +RG RR+DY++ +
Sbjct: 52 AISELNGTSWKGERIIVELANRRRRSRSQSGDRRGRNPRRKPGRITRGPPRRTDYQISIK 111
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDR 145
L + SWQDLKD V ++ R
Sbjct: 112 NLSTRVSWQDLKDIFGEVAKVVYADAHNKR 141
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 21/144 (14%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R ++VGN +TR E+E LF KYG + +D+K G+AF+ FED RDA DAIRG
Sbjct: 2 ARPIFVGNFEFETRQSELERLFSKYGRVERVDMK-----SGFAFVYFEDERDAADAIRGL 56
Query: 66 DGYNF--DGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSS 120
D +F D +L VE A G R RH GSR ++ + + L + P
Sbjct: 57 DNISFGYDRRKLSVEWARGERGRHRD-----------GSRSMANQRPTKTLFVINFDPIH 105
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRD 144
+D+K H R G+V ++ R+
Sbjct: 106 TRVEDIKRHFERYGEVLHVRIRRN 129
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L+VG +P ++ D F YG I+D L G+ F+E ED RDA D + G
Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G R+ VE A S+ RR+ +R++V L SWQDLKD
Sbjct: 61 EFMGSRIVVEPAR----GERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKD 116
Query: 129 HMRRAGDVCFSQVFRD 144
MR+AG+ F+ R+
Sbjct: 117 VMRKAGEPTFTDAHRE 132
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +++ED F YGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 8 SDGKVYVGDLGSSASKQQLEDAFSYYGPLHNV--WVARNPPGFAFVEFEDPRDAEDAVRG 65
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R+RVEL++G
Sbjct: 66 LDGRIVCGRRIRVELSNG 83
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L+VG +P ++ D F YG I+D L G+ F+E ED RDA D + G
Sbjct: 2 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 56
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G R+ VE A S+ RR+ +R++V L SWQDLKD
Sbjct: 57 EFMGSRIVVEPAR----GERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKD 112
Query: 129 HMRRAGDVCFSQVFRD 144
MR+AG+ F+ R+
Sbjct: 113 VMRKAGEPTFTDAHRE 128
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 21/164 (12%)
Query: 21 REVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRV 77
+E+ED F + G I +I L G+ F+E+ED DA+D + DG +F G RL V
Sbjct: 35 QEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVV--PDGTDFKGERLTV 87
Query: 78 ELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DV 136
+ A G R + +S S S RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 88 QFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDV 142
Query: 137 CFSQVFRD-RGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
+S+ D RG + + G ++ + GR G C
Sbjct: 143 VYSETGHDGRGFVEFET----GSDLKTAVEKLDGREFKGSRVLC 182
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG + D+ +K G+ F++F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQEQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
+ G R+ +E + R R ++ GG R S R + +R+++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGGGFRGREPTFRRGGERQFSNRYSRPCSTRFRLVIDN 118
Query: 117 LPSSASWQDLKDHMRRAGD----------------VCFSQVFRDRGELHWRMLRFWGGEV 160
L + SWQD+KDH+R+ G VCFS +L M + G E+
Sbjct: 119 LSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFST----HDDLRDAMNKLQGEEL 174
Query: 161 NWGEIR 166
N +++
Sbjct: 175 NGRKLK 180
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 9 LYVGNLP--GDTRM------------------REVEDLFYKYGPIVDIDLKIPPRPPGYA 48
LY+GNLP G +R ++VED F K+G ++K+ G+
Sbjct: 6 LYLGNLPRTGKSRFLHAIQLVYLCPFVSTATKKDVEDFFVKHGHGTIQEIKLMN---GFG 62
Query: 49 FLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS 108
F+E+ + DA D + G F RL V+ A G R + + SG RR+
Sbjct: 63 FIEYSNPSDARDIVPIFHGKEFMDSRLTVQFARGPRPTRNDF----NGPSGDRTPRPRRT 118
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR 145
YR+ ++GLP+ SWQDLKD R++G DV FS+V R+R
Sbjct: 119 PYRMNISGLPTDTSWQDLKDFARKSGVDVVFSEVSRNR 156
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 213 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 272
+GIV++ + DD++ AI KLD +F+ S ++ + R SRSP P R
Sbjct: 159 SGIVEFETADDLRIAINKLDNYDFKGGRV-SCTSDQQARNSRGRSRSP---PPAGRRNGY 214
Query: 273 SPYYSRSRSPSRSWSYSPR---SRSYSPRGK 300
SP R SP R YSP R YSPRG+
Sbjct: 215 SPREGRGYSPGRRGGYSPHRGGDRGYSPRGR 245
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L + +++E+ F YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL T ++E F KYG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 12 VYIGNLANHTSRHDIESAFGKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRALDGS 69
Query: 69 NFDGYRLRVELAH 81
G R++ E++H
Sbjct: 70 RICGSRVKCEMSH 82
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus
(Silurana) tropicalis]
Length = 234
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+ED+F +YG + + + PPG+AF+EFED RDAEDA +G DG
Sbjct: 14 VYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKGLDGS 71
Query: 69 NFDGYRLRVELA 80
G R VE++
Sbjct: 72 RICGVRAAVEMS 83
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ SS LY+GNLP +VE F +G ++K+ G+ F+E++D DA D
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ DG +F G RL V+ A G R M + RR+ +R+ +TGLP+
Sbjct: 58 VVP--DGSDFMGERLTVQFARGTRHREGGMGHERAPPR------PRRTPHRMQITGLPND 109
Query: 121 ASWQDLKDHMRRAG-DVCFSQVFRD 144
SWQDLKD R++ DV +S+ RD
Sbjct: 110 TSWQDLKDFARQSSLDVVYSETGRD 134
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQ+LKD MR+AG+V ++ +
Sbjct: 119 SSRVSWQELKDLMRKAGEVTYADAHK 144
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRRHSS 88
N G +LRVEL+ G +R S
Sbjct: 74 NMCGCKLRVELSTGEKRSRS 93
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +YVG+L + E+ED F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAH 81
AIRG DG G R RVE+++
Sbjct: 59 AIRGLDGRTICGRRARVEMSN 79
>gi|24645765|ref|NP_524307.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|195499861|ref|XP_002097127.1| GE26048 [Drosophila yakuba]
gi|7299363|gb|AAF54555.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|194183228|gb|EDW96839.1| GE26048 [Drosophila yakuba]
gi|384217|prf||1905314A RNA-binding protein
Length = 135
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EF+D RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFDDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L + +++E+ F YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
+ G RL VE A S G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD R+AG+V ++ +
Sbjct: 119 SRVSWQDLKDLTRKAGEVTYADAHK 143
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
+ SR ++VGNLP D ++E+ F ++G ++D+ + +PPG+AF++FED RDAEDA+
Sbjct: 42 TDQSRQVFVGNLPDDIEKMDLENEFRQFGRLLDV--WVARKPPGFAFVKFEDQRDAEDAV 99
Query: 63 RGRDGYNFDGYRLRVELAH 81
+G + G +RVE++H
Sbjct: 100 QGLNRRTAFGREIRVEISH 118
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 40/169 (23%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 2 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 56
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ G R+ VE A G RR S Y S S S+G+ L D
Sbjct: 57 DLCGERVIVEHARGPRRDGS----YGSGRSKHSKGIL--------------------LSD 92
Query: 129 HMRRAGDVCFSQVFRDR-----------GELHWRMLRFWGGEVNWGEIR 166
+MR+AG+V ++ + R ++ + + G EVN +IR
Sbjct: 93 YMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR 141
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK R G+AF+ ED RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL------- 117
G +F G R+RVE R + G RG SRRS + T
Sbjct: 86 GIDFGRKGRRIRVEWTKEDR-------------TAGRRGSSRRSPTQARPTKTLFVINFD 132
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
P + +DL+ H + G V ++ ++
Sbjct: 133 PINTRIRDLERHFDKYGRVANVRIKKN 159
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 1 MSSRSSRTLYVGNL-PGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
+R ++TL+V N P +TR+R++E F KYG + ++ +K +AF++FE DA
Sbjct: 118 TQARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKK-----NFAFVQFEVQEDAT 172
Query: 60 DAIRGRDGYNFDGYRLRVELA 80
A+ G +G +F + VE A
Sbjct: 173 RALEGTNGSHFMDRVISVEYA 193
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 37 SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 94
Query: 65 RDGYNFDGYRLRVELAHGGRRHS 87
DG G R+RVEL+ G R S
Sbjct: 95 LDGKVICGSRVRVELSTGMPRRS 117
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNL G ++ + F K+GPI ID + +AF++F RDAE A+R +
Sbjct: 176 VFVGNLDGKVSEEDLTNAFSKFGPINKIDYRR-----NFAFVDFVKSRDAEVAMREMNER 230
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +L+V + H R S +R ++S + V L +SASWQDLKD
Sbjct: 231 VLLGTKLKV-VPHSERSKRSETNREPDFASQAT------------VLNLDNSASWQDLKD 277
Query: 129 HMRRAGDVCFSQVFRDRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFSC 179
R+AG+V ++ V R + + ++ F + ++ A L G +
Sbjct: 278 FARQAGEVVYASVII-RDQKRYGLVEFTSPKT----MKAAVEQLNGKKIAV 323
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
T+++G+LP + V+D F +YGP+ I L + F++F +DA++A++ DG
Sbjct: 8 TVWMGDLPPGIKRGHVKDFFEEYGPLGGIRL-----MNNFGFIDFRKKKDAKEAVKELDG 62
Query: 68 YNFDGYRLRVELAH---GGRRHSSSMDRYSSYSSGGSRGVSR---RSDYRVLVTGLPSSA 121
G R+R+E + G ++ D + GG + R+ Y + V+ L +
Sbjct: 63 KKLKGARIRLEHSDGPGGSKKKGEDYDAVNFPPIGGQSSMYERPYRTKYTISVSNLSTRF 122
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGE 147
SW DLK+ MRRAG+V ++ GE
Sbjct: 123 SWADLKNFMRRAGEVTYTDAHVRSGE 148
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG LP E+E++F ++GP+ ++ + RP G+AF+EFED RDA DA+R
Sbjct: 34 SDCKVYVGGLPERASRGELEEIFGRFGPLRNV--WVARRPWGFAFVEFEDARDAIDAVRQ 91
Query: 65 RDGYNFDGYRLRVELAHGGRRH 86
DG G R RVEL+HG RR+
Sbjct: 92 LDGSRMCGVRARVELSHGQRRN 113
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 38 SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 95
Query: 65 RDGYNFDGYRLRVELAHGGRRHS 87
DG G R+RVEL+ G R S
Sbjct: 96 LDGKVICGSRVRVELSTGMPRRS 118
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 1 MSSRSSR----TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI---PPRPPGYAFLEFE 53
SSR SR +L++ N+P TR ++ LF KYGPI D+ + + RP G+A+++FE
Sbjct: 22 CSSRYSRPPNSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFE 81
Query: 54 DYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 90
D RDAEDA+ D F G L +E A G R+ S M
Sbjct: 82 DLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTPSEM 118
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+S LYVG+L TR R++E LF KYG + D+D+K YAF+EF D RDA+DA
Sbjct: 9 ASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKR-----DYAFVEFSDPRDADDARHY 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG +FDG R+ VE A G
Sbjct: 64 LDGKDFDGSRIIVEFAKG 81
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 37 SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 94
Query: 65 RDGYNFDGYRLRVELAHGGRRHS 87
DG G R+RVEL+ G R S
Sbjct: 95 LDGKVICGSRVRVELSTGMPRRS 117
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRRHS 87
+ G R+RVEL++G RR +
Sbjct: 70 SLCGCRVRVELSNGERRRA 88
>gi|428672140|gb|EKX73055.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 158
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S + LYVGNL DT +++ LF ++G + ++ + RPPG+AF+ FED RDA DA
Sbjct: 6 ESMEGKRLYVGNLNEDTTTDQIDSLFSRFGILTNV--WVARRPPGFAFVTFEDPRDASDA 63
Query: 62 IRGRDGYNFDGYRLRVELAHGGR 84
I +G F G LRVE G R
Sbjct: 64 IAELNGREFQGTTLRVEYCKGAR 86
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+L R +E F YG IV++DLK GY FLEF D DA+DA+ +G
Sbjct: 4 VYIGHLSNQAHKRNMEP-FKGYGKIVEVDLK-----NGYGFLEFGDVCDADDAVHELNGK 57
Query: 69 NFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
+ G + VE G R S S G ++YR++ L +WQ
Sbjct: 58 DLCGDHVIVEHTWGPRCDSSYSSGRSGYGYRRSGRDKNGPPTHTEYRLIDENLTGCCNWQ 117
Query: 125 DLKDHMRRAGDVCFSQVFRDR 145
DLKD+M +AG+V ++ R
Sbjct: 118 DLKDYMHQAGEVTYADAHNGR 138
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRRHS 87
+ G R+RVEL++G RR +
Sbjct: 70 SLCGCRVRVELSNGERRRA 88
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRRHS 87
+ G R+RVEL++G RR +
Sbjct: 74 SLCGCRVRVELSNGERRRA 92
>gi|148223201|ref|NP_001080460.1| serine/arginine-rich splicing factor 3 [Xenopus laevis]
gi|28302173|gb|AAH46661.1| Sfrs3-prov protein [Xenopus laevis]
Length = 191
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDLRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L E+E F YGP+ + + PPG+AF+E+ED RDAEDA++G DG
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSV--WVARNPPGFAFVEYEDARDAEDAVKGMDGK 73
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL++G R S
Sbjct: 74 VLCGARVRVELSNGMSRKS 92
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 30/161 (18%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+S +Y+G LP R R+VED F YG I +I LK G+ F+EF+D RDA+DA+
Sbjct: 88 ASSRVYIGRLPYRARERDVEDFFKGYGRIREILLK-----NGFGFVEFDDPRDADDAVYH 142
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRY-SSY-SSGGSRGVS---------------RR 107
+G G R+ VE+ +R D + SSY S GSRG S +
Sbjct: 143 LNGRELCGERIIVEMT---KRPPKGRDAFRSSYRGSYGSRGFSPERRRRDRDDKYGPPSQ 199
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGEL 148
+ +R +V+ + + SWQ H+R A CF Q+F G +
Sbjct: 200 TPWRCIVSNVSTRVSWQ----HLRMAQAKCF-QIFFSTGNV 235
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S S +YVG+L +++ED F YGP+ ++ + PPG+AF+EFED RDA+DA
Sbjct: 6 DSGSDCKVYVGDLGSSASKQDLEDAFGYYGPLKNV--WVARHPPGFAFVEFEDPRDADDA 63
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR 107
+RG DG + G R+RVE ++G R G RGVSRR
Sbjct: 64 VRGLDGRSIAGRRVRVEPSNGMARR-----------RGRDRGVSRR 98
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++G DV +S+V R+R
Sbjct: 111 VETSWQDLKDFARQSGLDVVYSEVGRER 138
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++G DV +S+V R+R
Sbjct: 111 VETSWQDLKDFARQSGLDVVYSEVGRER 138
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L E+E F YGP+ + + PPG+AF+E+ED RDAEDA++G DG
Sbjct: 17 VYVGDLGNGAAKGELERAFSYYGPLRSV--WVARNPPGFAFVEYEDTRDAEDAVKGMDGK 74
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 75 VLCGARIRVELSTGMSRKS 93
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSS---------------MDRYSSYSSGGSR-GVSRRSDYRV 112
G R+ VE A G R S D+Y S S SR G R++YR+
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGELHWRM 152
+V L + SWQ VC F LHW++
Sbjct: 121 VVENLSTRVSWQ-----------VCTFLKF-----LHWKV 144
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFGYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 LISGSRVRVELSTGMPRRS 89
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis
mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +E+ED F YG + ++ + PPG+AF+EFED RDAEDAIRG DG
Sbjct: 13 VYVGDLGSGATKQELEDAFSYYGSLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 70
Query: 69 NFDGYRLRVELAHGGR 84
G R RVE ++G R
Sbjct: 71 TICGRRARVEPSNGRR 86
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S + +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA
Sbjct: 8 CSLTETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDA 65
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHS 87
+RG DG G R+RVEL+ G R S
Sbjct: 66 VRGLDGKVICGSRVRVELSTGMPRRS 91
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+S LYVG+L TR R++E LF KYG + D+D+K YAF+EF D RDA+DA
Sbjct: 9 ASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRD-----YAFVEFSDPRDADDARHY 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG FDG R+ VE A G
Sbjct: 64 LDGKEFDGSRIIVEFAKG 81
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRDLDGR 133
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 134 TLCGCRVRVELSNGEKR 150
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 15 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 72
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R+RVEL+ G +R S
Sbjct: 73 TMCGCRVRVELSTGEKRSRS 92
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|288806618|gb|ADC54214.1| RE57382p [Drosophila melanogaster]
Length = 178
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 56 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 113
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 114 RCCGTRIRVEM 124
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L E+E+ F YGP+ ++ + PPG+AF+EFED RDA DA+R DG
Sbjct: 23 VYVGELGNSGTKHELEEAFGYYGPLRNV--WVARSPPGFAFVEFEDARDARDAVRALDGK 80
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R+S
Sbjct: 81 MLCGRRVRVELSTGKSRNS 99
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
G+ F+E+ED DA D + DG +F G RL V+ A G RR + + + +
Sbjct: 3 GFGFIEYEDAMDARDVV--PDGSDFKGERLTVQFARGPRRKEN----FPGPTDRPNMPRP 56
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGELHWRMLRFWGGEVNWGE 164
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G ++
Sbjct: 57 RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQGRGFVEFE--TAADLKTAI 113
Query: 165 IREAGRILGGGMFSCL 180
+ GR G SC+
Sbjct: 114 DKLDGREFKGSRVSCV 129
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD 50
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 247
H RE+ Y ++ G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 35 HMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 133
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 134 TLCGCRVRVELSNGEKR 150
>gi|238878201|gb|EEQ41839.1| predicted protein [Candida albicans WO-1]
Length = 331
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 28/151 (18%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
++ L+V L D EV+D F + P+V++ L GYAF+ FE+ DA+ A+
Sbjct: 53 TKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDAKQALELL 107
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+ F+G +L++E A R + R YR+L+T L +WQD
Sbjct: 108 NDAEFNGEKLQIEFAKERREDT-------------------RGKYRLLITNLAEGTAWQD 148
Query: 126 LKDHMRRAGDV--CFSQVFR--DRGELHWRM 152
+KD +R D + +VF D GE M
Sbjct: 149 IKDFVREKTDSQPSYVKVFTNFDNGETTCSM 179
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 49 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 106
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 107 TLCGCRVRVELSNGEKR 123
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL +T ++E F KYG + ++ + PPG+AF+E+ED RDAEDA+R DG
Sbjct: 13 VYVGNLGNNTARGDLEASFSKYGALKNV--WVARNPPGFAFVEYEDPRDAEDAVRAMDGS 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RICGSRVRVEMSSG 84
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GN+ + RE+E F +GP+ D+ + PPG+AF FED RDAEDA+R DG
Sbjct: 4 VYIGNIGDNASKREIEREFETFGPLRDV--WVARNPPGFAFCVFEDRRDAEDAVRELDGR 61
Query: 69 NFDGYRLRVELAHG 82
G R RVELA G
Sbjct: 62 YICGQRARVELAKG 75
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELEHAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 108
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++G DV +S+V R+R
Sbjct: 109 VETSWQDLKDFARQSGLDVVYSEVGRER 136
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 108
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDR 145
SWQDLKD R++G DV +S+V R+R
Sbjct: 109 VETSWQDLKDFARQSGLDVVYSEVGRER 136
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 30/151 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L +++E F YG I D+ LK G+ F+EF+D RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGYRLRVELAH--------GGRRHSSSMDRYSSYSSGG--------SRGVSRRSD--- 109
G R+ ++ + GG R SSYS GG RG RR
Sbjct: 60 ELGGDRVILDYSKPRGGGGSGGGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPRRESRYG 119
Query: 110 ------YRVLVTGLPSSASWQDLKDHMRRAG 134
+RVLV L S SWQDLKD +RR G
Sbjct: 120 RPYSTRHRVLVENLSSRISWQDLKDQVRRQG 150
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
G+ F+E+ED DA D + DG +F G RL V+ A G RR + + +
Sbjct: 18 GFGFIEYEDAMDARDVV--PDGSDFKGERLTVQFARGPRRKEN----FPGPPDRPNMPRP 71
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGELHWRMLRFWGGEVNWGE 164
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G ++
Sbjct: 72 RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQGRGFVEFE--TAADLKTAI 128
Query: 165 IREAGRILGGGMFSCL 180
+ GR G SC+
Sbjct: 129 DKLDGREFKGSRVSCV 144
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 21 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 79 VICGSRVRVELSTGMPRRS 97
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R+RVEL++G +R S
Sbjct: 69 TLCGCRVRVELSNGEKRSRS 88
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIAGNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|355561641|gb|EHH18273.1| hypothetical protein EGK_14839 [Macaca mulatta]
Length = 164
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial
[Desmodus rotundus]
Length = 116
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 4 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 61
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 62 TLCGCRVRVELSNGEKR 78
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 21/141 (14%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---------SSSMDRYSSYS 97
Y F+EFED RDA+DA+ +G G R+ VE A G RR S +
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRXGGGGYSSRRT 60
Query: 98 SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR---GELHWR-- 151
SG + G R+++R++V L S SWQDLKD MR+AG+V ++ ++R G + +R
Sbjct: 61 SGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSY 120
Query: 152 ------MLRFWGGEVNWGEIR 166
+ + G E+N IR
Sbjct: 121 SDMKRALDKLDGTEINGRNIR 141
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus
rotundus]
Length = 235
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 3 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 61 VICGSRVRVELSTGMPRRS 79
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRRH 86
G R+RVEL++G +R+
Sbjct: 70 TLCGCRVRVELSNGEKRN 87
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R+RVEL++G +R S
Sbjct: 69 TLCGCRVRVELSNGEKRSRS 88
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|443725388|gb|ELU13011.1| hypothetical protein CAPTEDRAFT_223451 [Capitella teleta]
Length = 154
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+LP D RE+E F YGP+ ++ + PPG+AF+E+ED RDA+DA+R DG
Sbjct: 14 IYVGDLPRDASERELERAFSYYGPLKNV--WVARNPPGFAFIEYEDPRDADDAVRSLDGS 71
Query: 69 NFDGYRLRVELAHGGRRHSSSM 90
G R RVE + G R M
Sbjct: 72 TICGVRARVEHSTGKVRPKPWM 93
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding
protein srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Callithrix jacchus]
Length = 262
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP-----RPPGYAFLEFEDYRDAEDAI 62
+L+V N+ DTR ++ F +YGPIVD+ +PP RP G+A+++FED RDAEDA+
Sbjct: 11 SLFVRNVANDTRSEDLRREFGRYGPIVDV--YVPPDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSM 90
R D G ++ ++ A G R+ + M
Sbjct: 69 RNLDRKWICGRQMEIQFAQGDRKTPNQM 96
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 12 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD 51
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 36 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 89
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+P DT + E++ +F K G +V D++ +AF+E+ A DA+ +GY
Sbjct: 175 VFVGNIPLDTTVDELKAVFEKCGELVKCDMRK-----RFAFIEYHKPESASDALNQLNGY 229
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +++V + HS + +RY + Y V V + + SWQDLKD
Sbjct: 230 ILHGEKIKV------KPHSDNSNRYREKVPP----PRHKPGYAVTVANIEETTSWQDLKD 279
Query: 129 HMRRAGDVCFSQVFRDRGE 147
R AG+V ++ + G+
Sbjct: 280 FGRLAGEVSYASIVIKDGK 298
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Papio anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing
factor, arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d
[Homo sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK R G+AF+ ED RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV-------LVTGL 117
G +F G R+RVE R + G RG SRRS ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDR-------------TVGRRGSSRRSPTNARPTKTLFVINFD 132
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
P + +DL+ H + G V ++ ++
Sbjct: 133 PINTRIRDLERHFDKYGRVANVRIKKN 159
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 1 MSSRSSRTLYVGNL-PGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
++R ++TL+V N P +TR+R++E F KYG + ++ +K +AF++FE DA
Sbjct: 118 TNARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKK-----NFAFVQFEVQEDAT 172
Query: 60 DAIRGRDGYNFDGYRLRVELA 80
A+ G +G +F + VE A
Sbjct: 173 RALEGTNGSHFMDRVISVEYA 193
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Canis lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like
[Ailuropoda melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Felis catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic
construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic
construct]
Length = 239
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 22 EVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
+VE+ F +G I +I L G+ F+E++D DA D + G F G RL V+
Sbjct: 50 DVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQF 104
Query: 80 AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCF 138
A G R + + RR+ +R+ +TGLP SWQDLKD R++G DV +
Sbjct: 105 ARGSTRPREGFEHQPRMAP-----RPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVY 159
Query: 139 SQVFRDR 145
S+V R+R
Sbjct: 160 SEVNRER 166
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|242010923|ref|XP_002426207.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212510258|gb|EEB13469.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 173
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S S +YVG+L +E+ED F YGP+ ++ + PPG+AF+EFED RDA+DA
Sbjct: 6 DSGSDCKVYVGDLGSSASKQELEDAFGYYGPLRNV--WVARNPPGFAFVEFEDPRDADDA 63
Query: 62 IRGRDGYNFDGYRLRVELAHG 82
+RG DG G R+RVE ++G
Sbjct: 64 VRGLDGRTVCGRRVRVEPSNG 84
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNSGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R+RVEL++G +R S
Sbjct: 74 TLSGCRVRVELSNGEKRTRS 93
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
Length = 151
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 12/98 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP E+E+ F +G + ++ + PPG+A++EFED+RDA DA++ +G
Sbjct: 14 IYVGNLPPGAAKHEIEERFSDFGRLRNV--WVARNPPGFAYVEFEDHRDARDAVKSLNGK 71
Query: 69 NFDGYRLRVELAHGGRR----------HSSSMDRYSSY 96
G R RVE +HG RR S S DRY+S+
Sbjct: 72 MICGVRSRVEFSHGMRRPSRRGLPPPAPSRSHDRYNSH 109
>gi|158224|gb|AAA28850.1| RNA binding protein [Drosophila melanogaster]
Length = 135
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATAALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD 88
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPI 33
+YVGNLP D R +++ED+FYKYG I
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAI 42
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 73 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 126
>gi|148684205|gb|EDL16152.1| mCG21910 [Mus musculus]
Length = 163
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELEWAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 69 TLCGCRVRVELSNGEKR 85
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 11 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD 50
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 200 HFRES----YHNIFAGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ Y +++ TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 35 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 88
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Papio anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c
[Homo sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKSELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R+RVEL++G +R S
Sbjct: 69 TLCGCRVRVELSNGEKRTRS 88
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 22 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 80 VICGSRVRVELSTGMPRRS 98
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Cricetulus griseus]
Length = 227
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 5 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 62
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 63 VICGSRVRVELSTGMPRRS 81
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+ED+F +YG + + + PPG+AF+EFED RDAEDA +G DG
Sbjct: 12 VYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKGLDGS 69
Query: 69 NFDGYRLRVELA 80
G R VE++
Sbjct: 70 RICGVRATVEMS 81
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+ED+F +YG + + + PPG+AF+EFED RDAEDA +G DG
Sbjct: 12 VYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKGLDGS 69
Query: 69 NFDGYRLRVELA 80
G R VE++
Sbjct: 70 RICGVRATVEMS 81
>gi|300681335|emb|CAZ96065.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 324
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK R G+AF+ ED RDAEDAI D
Sbjct: 26 RPIFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL------- 117
G +F G R+RVE R + G RG SRRS T
Sbjct: 86 GIDFGRKGRRIRVEWTKEDR-------------TVGRRGSSRRSPTNARPTKTLFVINFD 132
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRD 144
P + +DL+ H + G V ++ ++
Sbjct: 133 PINTRIRDLERHFDKYGRVANVRIKKN 159
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 1 MSSRSSRTLYVGNL-PGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
++R ++TL+V N P +TR+R++E F KYG + ++ +K +AF++FE DA
Sbjct: 118 TNARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKK-----NFAFVQFEVQEDAT 172
Query: 60 DAIRGRDGYNFDGYRLRVELA 80
A+ G +G +F + VE A
Sbjct: 173 RALEGTNGSHFMDRVISVEYA 193
>gi|281338419|gb|EFB14003.1| hypothetical protein PANDA_002213 [Ailuropoda melanoleuca]
Length = 114
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 2 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 59
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 60 VICGSRVRVELSTGMPRRS 78
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|448096991|ref|XP_004198563.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359379985|emb|CCE82226.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 280
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 33/174 (18%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V L D ++E F GPI D+ L G+AF+ FE DA+ A+ D
Sbjct: 7 IFVRPLGFDVEREKLEAHFQDIGPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNS 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG L++E A + + R +RV VT LP +WQD KD
Sbjct: 62 EFDGQPLQIEFAREKKEDT-------------------RGQFRVKVTNLPDGTAWQDFKD 102
Query: 129 HMRRAGDVC--FSQVFR--DRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFS 178
+R ++ F++VFR D GE+ L F E E+ +A +L F
Sbjct: 103 FVRDKTELAPTFAKVFRNYDTGEV-IGALEFASAE----ELAQAVPLLNESEFQ 151
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Monodelphis domestica]
Length = 233
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R +G
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELNGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 21 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 79 VICGSRVRVELSTGMPRRS 97
>gi|119624305|gb|EAX03900.1| splicing factor, arginine/serine-rich 3, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSS---------------MDRYSSYSSGGSR-GVSRRSDYRV 112
G R+ VE A G R S D+Y S S SR G R++YR+
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 113 LVTGLPSSASWQ 124
+V L + SWQ
Sbjct: 121 VVENLSTRVSWQ 132
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 200 HFRESYHNIFA-------GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 251
H R++ FA G GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RV++YD
Sbjct: 17 HMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYD 75
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD 32
>gi|448111013|ref|XP_004201740.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359464729|emb|CCE88434.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 281
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 33/174 (18%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V L D ++E F GPI D+ L G+AF+ FE DA+ A+ D
Sbjct: 7 IFVRPLGFDVEREKLEAHFQDIGPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNS 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG L++E A + + R +RV VT LP +WQD KD
Sbjct: 62 EFDGQPLQIEFAREKKEDT-------------------RGQFRVKVTNLPDGTAWQDFKD 102
Query: 129 HMRRAGDVC--FSQVFR--DRGELHWRMLRFWGGEVNWGEIREAGRILGGGMFS 178
+R ++ F++VFR D GE+ L F E E+ +A +L F
Sbjct: 103 FVRDKTELAPTFAKVFRNYDTGEV-IGALEFASAE----ELAQAVPLLNESEFQ 151
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Canis lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Felis catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 144
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 45 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD 84
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 200 HFRESYHNIFAGM----TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 248
H RE+ +A + TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 69 HMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 122
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E +F YG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSQGSKNELERVFGYYGALKNV--WVARNPPGFAFVEFEDNRDAEDAVRALDGR 70
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R RVE++ G R +
Sbjct: 71 TVCGVRARVEMSSGQSRRGN 90
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a
[Homo sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|348507887|ref|XP_003441487.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Oreochromis niloticus]
Length = 165
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL+ G +R
Sbjct: 69 TLCGCRVRVELSTGEKR 85
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL T ++E F YG ++++ + PPG+A++EFED RDA+DAI+G DG
Sbjct: 15 IYVGNLSSSTTRGDLEYEFEYYGRLINV--WVAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 69 NFDGYRLRVELAHGGRRHSSS 89
G R+RVE +HG R+ S
Sbjct: 73 ELHGRRIRVERSHGMPRNRGS 93
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 14 LPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGY 73
L D R R++EDLFYKYG + D+K GY F+E+ED RDA+DA+R DG + G
Sbjct: 28 LALDCRPRDLEDLFYKYGKLTRCDVKR-----GYGFVEYEDRRDAQDALRDLDGVSVLGT 82
Query: 74 RLRVELAHGGRRHSSSM 90
R+ +E A G RR +
Sbjct: 83 RIAIEWAKGARRTDTDT 99
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 22 VYVGNLGTGAGKGEYERAFSYYGPLRSV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 80 VICGSRVRVELSTGMPRRS 98
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERSFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 74 TLSGSRVRVELSNGEKR 90
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Monodelphis domestica]
Length = 235
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA++G DG
Sbjct: 13 VYVGNLETGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGLPRRS 89
>gi|119389969|pdb|2HVZ|A Chain A, Solution Structure Of The Rrm Domain Of Sr Rich Factor
9g8
Length = 101
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 3 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 61 VICGSRVRVELSTGMPRRS 79
>gi|221504228|gb|EEE29903.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 344
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 12 GNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFD 71
G + DT E+E +F KYG I + + PPG+AFL F+DYRDA+DA+ DGY +
Sbjct: 190 GGIEADTTTEELESIFGKYGTISTV--WVARNPPGFAFLTFDDYRDAKDAVAELDGYRYR 247
Query: 72 GYRLRVELAHG 82
G +RVE+A G
Sbjct: 248 GKPIRVEIARG 258
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 8 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 65
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 66 VICGSRVRVELSTGMPRRS 84
>gi|148690657|gb|EDL22604.1| mCG21131, isoform CRA_b [Mus musculus]
Length = 129
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|224130604|ref|XP_002320882.1| predicted protein [Populus trichocarpa]
gi|222861655|gb|EEE99197.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 18/143 (12%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN +TR E+E LF KYG + +D+K G+AF+ FED RDA DAIRG D
Sbjct: 1 RPIFVGNFEQETRQSELERLFRKYGRVERVDMK-----SGFAFVYFEDDRDAADAIRGLD 55
Query: 67 G--YNFDGYRLRVELA--HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL-PSSA 121
+ +D RL VE A + G R + G V++R + V P
Sbjct: 56 NIPFGYDRRRLSVEWARVYAGER--------GRHRDGPRSTVNQRPTKTLFVINFDPIHT 107
Query: 122 SWQDLKDHMRRAGDVCFSQVFRD 144
+D+K H R G+V ++ R+
Sbjct: 108 RVEDIKRHFERYGEVLHVRIRRN 130
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b
[Homo sapiens]
Length = 132
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERSFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 74 TLSGSRVRVELSNGEKR 90
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 4 VYVGNLGTGAGKSELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVE++ G R S
Sbjct: 62 VICGSRVRVEVSTGMPRRS 80
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,823,534,473
Number of Sequences: 23463169
Number of extensions: 268228349
Number of successful extensions: 1183825
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4670
Number of HSP's successfully gapped in prelim test: 15107
Number of HSP's that attempted gapping in prelim test: 948605
Number of HSP's gapped (non-prelim): 126133
length of query: 341
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 198
effective length of database: 9,003,962,200
effective search space: 1782784515600
effective search space used: 1782784515600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)