Your job contains 1 sequence.
>019419
MKQHQELSKTNNMSHSTAATTTFRLRANSKTRESPKQEAGINGVSLSPELKARAKSVPAD
VKTNNISKSRRALILNKPKSAEGAVGSHKDDEVKVFGRSLNRPVVEQFARPRRQRIVDAN
PGKIEDGLMDKKKKEFEEKLMLSENLVKDLQSEVFALKAEFVKAQSLNAELEKQNKKLVE
DLVAAEAKIASLSSREQREAVGEYQSPKFKDVQKLIANKLEHSIVMTDAISETSINTPPS
EPKIPIRNAAGVERKPQAYPSMPAPLPPPPPPRPPARAAATQKTPSFAQLYHSLTKQVEK
KDLPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAVSIADIF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019419
(341 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007755 - symbol:AT1G48280 "AT1G48280" species... 285 3.4e-37 2
TAIR|locus:2102385 - symbol:CHUP1 "CHLOROPLAST UNUSUAL PO... 98 0.00051 3
>TAIR|locus:2007755 [details] [associations]
symbol:AT1G48280 "AT1G48280" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] EMBL:CP002684 EMBL:AC007932
IPI:IPI00530542 PIR:G96522 RefSeq:NP_564524.1 UniGene:At.26293
PRIDE:Q9SX62 EnsemblPlants:AT1G48280.1 GeneID:841248
KEGG:ath:AT1G48280 TAIR:At1g48280 HOGENOM:HOG000153560
InParanoid:Q9SX62 OMA:GEIQNRS PhylomeDB:Q9SX62
ProtClustDB:CLSN2721717 Genevestigator:Q9SX62 Uniprot:Q9SX62
Length = 558
Score = 285 (105.4 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 93/234 (39%), Positives = 131/234 (55%)
Query: 16 STAATTTFRLRA-NSKTRESPKQEA-GINGVSLSPELKARAKSVPADVKTNNISKSRRAL 73
ST +TT R+RA NS K A NG++ + KS DVK N+ +K RR++
Sbjct: 5 STTSTTPSRVRAANSHYSVISKPRAQDDNGLT-----GGKPKSSGYDVK-NDPAK-RRSI 57
Query: 74 ILNKPKSAEGAVGSHKDDEVKVFGRSLNRP-VVEQFARPRR------QRIVDANPGKIED 126
+L + KSAE + RS+NRP VVEQF PRR + V A ED
Sbjct: 58 LLKRAKSAEEEMAVLAPQRA----RSVNRPAVVEQFGCPRRPISRKSEETVMATAAA-ED 112
Query: 127 GLMDXXXXXXXXXLMLSENLVKDLQSEVFALKAEFVKAQSLNAELEKQNKKLVEDLVAAE 186
L+++E+L+KDLQ +V LK E +A++ N ELE N+KL +DLV+AE
Sbjct: 113 EKRKRMEELEEK-LVVNESLIKDLQLQVLNLKTELEEARNSNVELELNNRKLSQDLVSAE 171
Query: 187 AKIASLSSREQREAVGEYQSPKFKDVQKLIANKLEHSIVMTDAISETSINTPPS 240
AKI+SLSS ++ E+Q+ +FKD+Q+LIA+KLE V + E+S +PPS
Sbjct: 172 AKISSLSSNDK--PAKEHQNSRFKDIQRLIASKLEQPKVKKEVAVESSRLSPPS 223
Score = 144 (55.7 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 282 QKTPSFAQLYHSLTKQVEKKDLPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAVSIADI 340
QK+P +QL+ L KQ ++L VN + V+ AH+SIVGEIQNRSAHL+A+ ADI
Sbjct: 280 QKSPPVSQLFQLLNKQDNSRNLSQSVNGNKSQVNSAHNSIVGEIQNRSAHLIAIK-ADI 337
>TAIR|locus:2102385 [details] [associations]
symbol:CHUP1 "CHLOROPLAST UNUSUAL POSITIONING 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009707
"chloroplast outer membrane" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA;IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP001313 GO:GO:0009707
EMBL:AB087408 IPI:IPI00541711 RefSeq:NP_001189974.1
RefSeq:NP_189197.2 UniGene:At.27741 ProteinModelPortal:Q9LI74
STRING:Q9LI74 PaxDb:Q9LI74 PRIDE:Q9LI74 EnsemblPlants:AT3G25690.1
EnsemblPlants:AT3G25690.2 GeneID:822157 KEGG:ath:AT3G25690
TAIR:At3g25690 eggNOG:NOG310144 HOGENOM:HOG000242560
InParanoid:Q9LI74 OMA:ELRNYQT PhylomeDB:Q9LI74
ProtClustDB:CLSN2680868 Genevestigator:Q9LI74 GO:GO:0009902
Uniprot:Q9LI74
Length = 1004
Score = 98 (39.6 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 283 KTPSFAQLYHSLTKQVEKKD-LPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAVSIADI 340
+ P + Y SL K+ KK+ PS ++ S A ++++GEI+NRS LLAV AD+
Sbjct: 720 RAPELVEFYQSLMKRESKKEGAPSLISSGTGNSSAARNNMIGEIENRSTFLLAVK-ADV 777
Score = 70 (29.7 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 36 KQEAGINGVSLSPELKARAKSVPA-DVKTNNISKSRRALILNKPKSAEGAVGSHKDDEVK 94
+QE+ I V L +LK + + ++ N++ R+ L + S G V K+ EV
Sbjct: 160 EQESDI--VELQRQLKIKTVEIDMLNITINSLQAERKKL--QEELSQNGIV--RKELEVA 213
Query: 95 VFGRSLNRPVVEQFARPRRQRIVDANPGKIEDGLMDXXXXXXXXXLMLSENLVKDLQSE- 153
R +++ +RQ +DAN K + L+ + E + KD + E
Sbjct: 214 -------RNKIKEL---QRQIQLDANQTKGQ--LLLLKQHVSSLQMKEEEAMNKDTEVER 261
Query: 154 ----VFALKAEFVKAQSLNAELEKQNKKLVEDLVAAEAKIASLSSREQREAVGE 203
V L+ + ++ + N EL+ + ++L L +AEA+IA+LS+ + + V +
Sbjct: 262 KLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAK 315
Score = 37 (18.1 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 238 PPSEPKIPIRNAAG 251
PP P+ P R+A G
Sbjct: 648 PPRVPRPPPRSAGG 661
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.124 0.326 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 341 307 0.0010 115 3 10 23 0.48 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 578 (61 KB)
Total size of DFA: 229 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.32u 0.11s 42.43t Elapsed: 00:00:02
Total cpu time: 42.32u 0.11s 42.43t Elapsed: 00:00:02
Start: Sat May 11 14:59:38 2013 End: Sat May 11 14:59:40 2013