BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019419
         (341 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1
           SV=1
          Length = 1004

 Score = 40.4 bits (93), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 281 TQKTPSFAQLYHSLTKQVEKKD-LPSPVNQKRPAVSIAHSSIVGEIQNRSAHLLAVSIAD 339
             + P   + Y SL K+  KK+  PS ++      S A ++++GEI+NRS  LLAV  AD
Sbjct: 718 VHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSSAARNNMIGEIENRSTFLLAVK-AD 776

Query: 340 I 340
           +
Sbjct: 777 V 777


>sp|P16862|K6PF2_YEAST 6-phosphofructokinase subunit beta OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=PFK2 PE=1 SV=4
          Length = 959

 Score = 35.0 bits (79), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)

Query: 245 PIRNAAGVERKPQAYPSMPAPLPPPPPPRPPARAAATQKTPSFAQLYHSLTKQVEKKDLP 304
           P+ N  GV     A  + P P   PP P   A +  + K  S+  L + +        LP
Sbjct: 133 PLGNVVGVTSTKNAVSTKPTP---PPAPEASAESGLSSKVHSYTDLAYRMKTTDTYPSLP 189

Query: 305 SPVNQKRPAVSIAHSSIVGEIQNRSAHLLAVSIADIF 341
            P+N+ + A+++  S   G+    ++++ A+  + IF
Sbjct: 190 KPLNRPQKAIAVMTSG--GDAPGMNSNVRAIVRSAIF 224


>sp|P85120|DAPLE_XENLA Daple-like protein OS=Xenopus laevis GN=ccdc88c PE=1 SV=1
          Length = 2058

 Score = 32.7 bits (73), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 41/181 (22%)

Query: 91  DEVKVFGRSLNRPVVEQFARPRRQRIVDANPGKIEDGLMDKKKKEFEEKL-----MLSEN 145
           +E+K+  + L R  +E+  + + Q +V       ++ ++ K+ K   +++     +L +N
Sbjct: 803 EEMKICNKRLER--MEEENKAKEQEMVQLEK---DNKILQKESKRLWQQVELKDAILDDN 857

Query: 146 LVK--DLQSEVFALKAEFVKAQSLNA---ELEKQNKKLV--------------EDLVAAE 186
            VK  DL+ E  AL+ E  K + L+    +LE++NK L+              EDLV  +
Sbjct: 858 TVKLADLEKENRALEKEISKLRDLSTKTRDLERENKDLLQQMTVDKRTLATLREDLVLEK 917

Query: 187 AKIASLSSREQR-----EAVGEYQSPKFKDVQ-------KLIANKLEHSIVMTDAISETS 234
            K   +SS   +     E +G  +    +D         KL+ NK+E ++  T A+ E  
Sbjct: 918 LKTQQMSSELDKLSLELEKIGLNKESMLQDENSNAEKKYKLLENKIESTLKTTLAVKENK 977

Query: 235 I 235
           I
Sbjct: 978 I 978


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.125    0.335 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,865,922
Number of Sequences: 539616
Number of extensions: 5240638
Number of successful extensions: 62614
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 1106
Number of HSP's that attempted gapping in prelim test: 45514
Number of HSP's gapped (non-prelim): 10849
length of query: 341
length of database: 191,569,459
effective HSP length: 118
effective length of query: 223
effective length of database: 127,894,771
effective search space: 28520533933
effective search space used: 28520533933
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)